Miyakogusa Predicted Gene
- Lj0g3v0328679.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0328679.1 Non Chatacterized Hit- tr|I1GP25|I1GP25_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.89,3e-18,seg,NULL,gene.g25648.t1.1
(254 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G08500.1 | Symbols: MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MAPK/ER... 111 6e-25
AT4G08480.1 | Symbols: MAPKKK9, MEKK2 | mitogen-activated protei... 67 1e-11
AT4G12020.3 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | prote... 53 2e-07
AT4G12020.1 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | prote... 53 2e-07
AT4G12020.2 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | prote... 53 2e-07
>AT4G08500.1 | Symbols: MEKK1, ATMEKK1, MAPKKK8, ARAKIN | MAPK/ERK
kinase kinase 1 | chr4:5404272-5407062 REVERSE
LENGTH=608
Length = 608
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 126/303 (41%), Gaps = 63/303 (20%)
Query: 1 MELHDRTSFRIEGIEGEFDRICKSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLNEL 60
+E + TSFRI G GE DRI +SLG+SGP+D AI AWEA K RSSSD++ R K +L
Sbjct: 63 LEFPEPTSFRIGGGVGEMDRIYRSLGVSGPDDLAISFDAWEACKKRSSSDVVNRFKSFDL 122
Query: 61 DL---QEKVEE-----------VRNAVEGGELSE---------------NCVEGVRDRVR 91
D Q+ EE + + V+G +LSE N + V V
Sbjct: 123 DKVRDQDLSEEGPSGVVVGSDSMNHKVQGQDLSEAGPSGGIVTELSEIGNLITPVDRLVA 182
Query: 92 DEAXXXXXXXXXXXXXXXX-------------------INGVRPPMLKPPPGVRVPVVDH 132
D I G+RPP+LKPPP ++ P +DH
Sbjct: 183 DGVVENRRVMERTPTIVKSKGYLVPNNVVAVGVGVGGGIKGLRPPVLKPPPAMKRPPIDH 242
Query: 133 HACSTWDLFRELAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSPKREEEQGVGDAER 192
S+WD AP + R
Sbjct: 243 RG-SSWDFLTHFAPSETVKRPSSSSSSSEDGCDEEEGKEEEAEAEEM----------GAR 291
Query: 193 IAEIDAGLSESSSFTTSNEGDSSST--DVSPNTRIKRVITTGCWQKGEFLGGGSFGSVYE 250
++ E+ SFTT NEGDSSST + SP I T WQKG+ LG GSFGSVYE
Sbjct: 292 FIQLGDTADETCSFTT-NEGDSSSTVSNTSPIYPDGGAIITS-WQKGQLLGRGSFGSVYE 349
Query: 251 GIS 253
GIS
Sbjct: 350 GIS 352
>AT4G08480.1 | Symbols: MAPKKK9, MEKK2 | mitogen-activated protein
kinase kinase kinase 9 | chr4:5388253-5391507 REVERSE
LENGTH=773
Length = 773
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 111 INGVRPPMLKPPPGVRVPVVDHHACSTWDLFRELAPXXXXXXXXXXXXXXXXXXXXXXXX 170
I GVRP +LKPPP +++P VD S+WD+ AP
Sbjct: 389 IKGVRPSVLKPPPVMKLPPVDLPG-SSWDILTHFAPDSEIVRRPSSSSSSENGCDEEEAE 447
Query: 171 XXXXXSVSPKREEEQGVGDAERIAEIDAGLSESSSFTTSNEGDSSST--DVSPNTRIKRV 228
+ E++ GD +++ E+ SFTT NEGDSSST + SP
Sbjct: 448 D--------DKVEKEETGDM--FIQLEDTTDEACSFTT-NEGDSSSTVSNTSPICVSGGS 496
Query: 229 ITTGCWQKGEFLGGGSFGSVYEGISE 254
I T WQKG+ L GSFGSVYE ISE
Sbjct: 497 INTS-WQKGQLLRQGSFGSVYEAISE 521
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
Query: 1 MELHDRTSFRIEGIE-GEFDRICKSLGLSGPEDFAIPAAAWEAM--KVRSSSDILPRLKL 57
++ +RTSFR++G++ GE DRI + +G+SGPEDFAI + AW+A RSSSD++ +LK
Sbjct: 151 LDFPNRTSFRVDGVDDGEIDRIYQYIGVSGPEDFAISSDAWKARMEHERSSSDVVNKLKS 210
Query: 58 NELDLQE 64
+LD +E
Sbjct: 211 LDLDSRE 217
>AT4G12020.3 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | protein
kinase family protein | chr4:7201656-7209469 FORWARD
LENGTH=1879
Length = 1879
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 38/150 (25%)
Query: 111 INGVRPPMLKPPPGVRVPVVDHHACSTWDLFRELAPXXXXXXXXXXXXXXXXXXXXXXXX 170
I G+RPP+L+ P +++ + STWD AP
Sbjct: 1527 IKGLRPPVLQLQPAMKLSHIPRG--STWDFVTHFAPPE---------------------- 1562
Query: 171 XXXXXSVSPKREEEQGVGDAERIAEIDA-----GLSESSSFTTSNEGDSSST--DVSPNT 223
+V+P + + E A G E+ SFT N+GDSS T + SP
Sbjct: 1563 -----TVAPPSSSSEAREEEVETEETGAMFIPLGDKETCSFTV-NKGDSSRTISNTSPIY 1616
Query: 224 RIKRVITTGCWQKGEFLGGGSFGSVYEGIS 253
+ T CWQKG+ LG GS GSVYEGIS
Sbjct: 1617 ASEGSFIT-CWQKGQLLGRGSLGSVYEGIS 1645
>AT4G12020.1 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | protein
kinase family protein | chr4:7201656-7208596 FORWARD
LENGTH=1798
Length = 1798
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 38/150 (25%)
Query: 111 INGVRPPMLKPPPGVRVPVVDHHACSTWDLFRELAPXXXXXXXXXXXXXXXXXXXXXXXX 170
I G+RPP+L+ P +++ + STWD AP
Sbjct: 1527 IKGLRPPVLQLQPAMKLSHIPRG--STWDFVTHFAPPE---------------------- 1562
Query: 171 XXXXXSVSPKREEEQGVGDAERIAEIDA-----GLSESSSFTTSNEGDSSST--DVSPNT 223
+V+P + + E A G E+ SFT N+GDSS T + SP
Sbjct: 1563 -----TVAPPSSSSEAREEEVETEETGAMFIPLGDKETCSFTV-NKGDSSRTISNTSPIY 1616
Query: 224 RIKRVITTGCWQKGEFLGGGSFGSVYEGIS 253
+ T CWQKG+ LG GS GSVYEGIS
Sbjct: 1617 ASEGSFIT-CWQKGQLLGRGSLGSVYEGIS 1645
>AT4G12020.2 | Symbols: WRKY19, ATWRKY19, MAPKKK11, MEKK4 | protein
kinase family protein | chr4:7201656-7209469 FORWARD
LENGTH=1895
Length = 1895
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 38/150 (25%)
Query: 111 INGVRPPMLKPPPGVRVPVVDHHACSTWDLFRELAPXXXXXXXXXXXXXXXXXXXXXXXX 170
I G+RPP+L+ P +++ + STWD AP
Sbjct: 1527 IKGLRPPVLQLQPAMKLSHIPRG--STWDFVTHFAPPE---------------------- 1562
Query: 171 XXXXXSVSPKREEEQGVGDAERIAEIDA-----GLSESSSFTTSNEGDSSST--DVSPNT 223
+V+P + + E A G E+ SFT N+GDSS T + SP
Sbjct: 1563 -----TVAPPSSSSEAREEEVETEETGAMFIPLGDKETCSFTV-NKGDSSRTISNTSPIY 1616
Query: 224 RIKRVITTGCWQKGEFLGGGSFGSVYEGIS 253
+ T CWQKG+ LG GS GSVYEGIS
Sbjct: 1617 ASEGSFIT-CWQKGQLLGRGSLGSVYEGIS 1645