Miyakogusa Predicted Gene
- Lj0g3v0328149.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0328149.1 Non Chatacterized Hit- tr|J3LWY5|J3LWY5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G1,27.4,7e-18,Kinesin-related,Kinesin-related conserved domain;
coiled-coil,NULL; seg,NULL; SUBFAMILY NOT NAMED,NU,CUFF.22338.1
(497 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20150.1 | Symbols: | Kinesin motor family protein | chr3:70... 147 2e-35
AT5G55520.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Kinesin-re... 134 2e-31
AT5G55520.2 | Symbols: | CONTAINS InterPro DOMAIN/s: Kinesin-re... 132 4e-31
AT4G26660.1 | Symbols: | INVOLVED IN: biological_process unknow... 130 2e-30
AT3G23670.1 | Symbols: PAKRP1L, KINESIN-12B | phragmoplast-assoc... 96 6e-20
AT4G14150.1 | Symbols: PAKRP1, KINESIN-12A | phragmoplast-associ... 90 5e-18
>AT3G20150.1 | Symbols: | Kinesin motor family protein |
chr3:7031412-7036499 FORWARD LENGTH=1114
Length = 1114
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 149/467 (31%), Positives = 214/467 (45%), Gaps = 65/467 (13%)
Query: 22 RFDNEIDEEVNVGEEDIRQLRQQIDELYMSCEGNPKDISVSEDCVPYYSVEESCDTDMTS 81
+ DN+ +EE+ V E+D ++L QI L S K V+ D V V ++++
Sbjct: 506 KIDND-EEEITVDEDDFKELHLQIKSLRGSFNQKLKKFPVNRDSVNSSFVTAFGESELMD 564
Query: 82 CDEIEKEEVCSKET--SSDLCHKDSAAP----EDTSRAIKSTFRESISVSSCCRSPILEE 135
DEI EEV +E L DSAA + SR + SIS+S C +S IL+E
Sbjct: 565 DDEICSEEVEVEENDFGESLEEHDSAATVCKSSEKSRIEEFVSENSISISPCRQSLILQE 624
Query: 136 PLLSESPKISNIKRKSVAFSSSCLGSWNNVAEENSSSSIGQSFKKDELMQSSLRSSKVFP 195
P+ SESPK + RKS+A SSSCL + N++A+ S+ F + + ++SSLR SK+F
Sbjct: 625 PIQSESPKFRDSLRKSIALSSSCLRNQNSLAKSIKST----CFAESQHIRSSLRGSKIFT 680
Query: 196 GPTESLAASLQRGLQIIDHHQRNSALNKSLASFSFEHLTLTPCPEIDKGDSCDSTIQQKK 255
G TESLAASL+RGL IID+ N A N+ S S ++LT+ P +
Sbjct: 681 GSTESLAASLRRGLDIIDNPM-NPASNRCSVSLSSDNLTMQPPTD--------------- 724
Query: 256 YSIDERTATLLCESCRIKICDKEDSIKVKDSLKSLSDTAEAGNQDGLTANVPNDLEMAKS 315
D + LC +CR IC + L E DG M
Sbjct: 725 ---DRLPLSPLCPTCR--ICSSK-----------LPSVVEG---DG--------YHMEGV 757
Query: 316 IIREKELERLCKEQAARIEELNQLVEKLKGEKEINSIVVYGQEXXXXXXXXXXXXHLPDN 375
+ +++ELE+LC EQAA+IE+L +LV + K + E + + G L +
Sbjct: 758 LEKQQELEKLCSEQAAKIEQLTRLVGQHKLQTEDETEKLMGASNGERLPSANENQLL--S 815
Query: 376 XXXXXXXXXXXXXFDQRNCSFDATEKEELLKEIQNLRSKLQLYNDAPAKMSTDXXXXXXX 435
D + FD EKE LLKEI++L+ KLQ P MST+
Sbjct: 816 CITETYDVKQISDDDSKKTDFDIGEKEALLKEIEDLKKKLQ----TPVTMSTN-----EL 866
Query: 436 XXXXXXXXXXVFSNHNAXXXXXXXXXXXXXXSDWICLTDELRVDLES 482
+ S + S+WI LTDE RV++E+
Sbjct: 867 RSSLLARSFQLRSKNAEKDIEEERLRCTEMESEWISLTDEFRVEIET 913
>AT5G55520.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Kinesin-related protein (InterPro:IPR010544); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G26660.1); Has 32425 Blast hits to 20462
proteins in 1550 species: Archae - 335; Bacteria - 3392;
Metazoa - 16996; Fungi - 2645; Plants - 1561; Viruses -
54; Other Eukaryotes - 7442 (source: NCBI BLink). |
chr5:22488205-22491187 REVERSE LENGTH=805
Length = 805
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 145/457 (31%), Positives = 205/457 (44%), Gaps = 87/457 (19%)
Query: 35 EEDIRQLRQQIDELYMSCEGNPKDISVSEDCVPYYSVEESCDTDMTSCDEIEKEEVCSKE 94
++D+ +L + I++ + +C+ + + + ++ C+ D S DEI CS +
Sbjct: 190 DDDVVELSKHINKFHTNCDSD----DLRDSIQSSFASASGCEADSMSGDEI-----CSVD 240
Query: 95 TSSDLCHKDSAAPEDTSRAIKSTFRESISVSSCCRSPILEEPLLSESPKISNIKRKSVAF 154
D HKD A + A+ + IS+S +S ILEEP LSESPKI N RKSVA
Sbjct: 241 KHKD--HKDCALADSGPSAVGN----GISISLPHQSRILEEPPLSESPKIRNF-RKSVAA 293
Query: 155 SSSCLGSWNNVAEENSSSSIGQSFKKDELMQSSLRSSKVFPGPTESLAASLQRGLQIIDH 214
S+ S NV E SSS G ++ PT+SLAASLQRGL IID
Sbjct: 294 STKFQASPRNVTE---SSSTG---------------NRKPLSPTDSLAASLQRGLNIIDC 335
Query: 215 HQRNSALNKSLASFSFEHLTLTPCPEIDKGDSCDSTIQQKKYSIDERTATLLCESCRIKI 274
HQR+S N+S SFSF HL+L PC E D S + QK + ++ LLC SCR K+
Sbjct: 336 HQRSSLSNRSSVSFSFGHLSLKPCDEADDNLSASVKLLQKDRPKEGGSSILLCLSCRQKL 395
Query: 275 CDKEDSIKVKDSLKSLSDTAEAGNQDGLTANVPNDLEMAKSIIREKELERLCKEQAARIE 334
D+E Q G A + ++ + EK L+ +C EQA +IE
Sbjct: 396 -DQE-------------------AQGGYKA-------IEEACVDEKHLKNMCVEQATKIE 428
Query: 335 ELNQLVEKLKGEKEINSIVVYGQEXXXXXXXXXXXXHLPDNXXXXXXXXXXXXXFDQRNC 394
+L +++ K S V Q D+ +QR+
Sbjct: 429 QLTYQLDEYKKNALQESSKVTQQLMKS------------DDGEDETEVVKETYETNQRSE 476
Query: 395 SF-----DATEKEELLKEIQNLRSKLQLYNDAPAKMSTDXXXXXXXXXXXXXXXXXVFSN 449
F D +EKE LLKEI L+SKLQ P K STD F+
Sbjct: 477 EFGKVRIDLSEKEALLKEIAELKSKLQ-----PTK-STDNVRSSLLLRSFQMRKSIDFTK 530
Query: 450 ---HNAXXXXXXXXXXXXXXSDWICLTDELRVDLESN 483
+N+ S+WI LTD+LR+D++S+
Sbjct: 531 NTENNSEALEEERERWTEMESEWISLTDDLRMDIDSH 567
>AT5G55520.2 | Symbols: | CONTAINS InterPro DOMAIN/s:
Kinesin-related protein (InterPro:IPR010544); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G26660.1); Has 31032 Blast hits to 19733
proteins in 1535 species: Archae - 330; Bacteria - 3150;
Metazoa - 16413; Fungi - 2511; Plants - 1475; Viruses -
48; Other Eukaryotes - 7105 (source: NCBI BLink). |
chr5:22488205-22491187 REVERSE LENGTH=801
Length = 801
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 146/458 (31%), Positives = 207/458 (45%), Gaps = 93/458 (20%)
Query: 35 EEDIRQLRQQIDELYMSCEGNPKDISVSEDCVPYYSVEESCDTDMTSCDEIEKEEVCSKE 94
++D+ +L + I++ + +C+ + + + ++ C+ D S DEI CS +
Sbjct: 190 DDDVVELSKHINKFHTNCDSD----DLRDSIQSSFASASGCEADSMSGDEI-----CSVD 240
Query: 95 TSSDLCHKDSAAPEDTSRAIKSTFRESISVSSCCRSPILEEPLLSESPKISNIKRKSVAF 154
D HKD A + A+ + IS+S +S ILEEP LSESPKI N RKSVA
Sbjct: 241 KHKD--HKDCALADSGPSAVGN----GISISLPHQSRILEEPPLSESPKIRNF-RKSVAA 293
Query: 155 SSSCLGSWNNVAEENSSSSIGQSFKKDELMQSSLRSSKVFPGPTESLAASLQRGLQIIDH 214
S+ S NV E SSS G ++ PT+SLAASLQRGL IID
Sbjct: 294 STKFQASPRNVTE---SSSTG---------------NRKPLSPTDSLAASLQRGLNIIDC 335
Query: 215 HQRNSALNKSLASFSFEHLTLTPCPEIDKGDSCDSTIQQKKYSIDERTATLLCESCRIKI 274
HQR+S N+S SFSF HL+L PC E D S + QK + ++ LLC SCR K+
Sbjct: 336 HQRSSLSNRSSVSFSFGHLSLKPCDEADDNLSASVKLLQKDRPKEGGSSILLCLSCRQKL 395
Query: 275 CDKEDSIKVKDSLKSLSDTAEAGNQDGLTANVPNDLEMAKSIIREKELERLCKEQAARIE 334
D+E Q G A + ++ + EK L+ +C EQA +IE
Sbjct: 396 -DQE-------------------AQGGYKA-------IEEACVDEKHLKNMCVEQATKIE 428
Query: 335 ELN-QLVEKLKGEKEINSIVVYGQEXXXXXXXXXXXXHLPDNXXXXXXXXXXXXXFDQRN 393
+L QL E K + +S ++ D+ +QR+
Sbjct: 429 QLTYQLDEYKKNALQESSKLMKS-----------------DDGEDETEVVKETYETNQRS 471
Query: 394 CSF-----DATEKEELLKEIQNLRSKLQLYNDAPAKMSTDXXXXXXXXXXXXXXXXXVFS 448
F D +EKE LLKEI L+SKLQ P K STD F+
Sbjct: 472 EEFGKVRIDLSEKEALLKEIAELKSKLQ-----PTK-STDNVRSSLLLRSFQMRKSIDFT 525
Query: 449 N---HNAXXXXXXXXXXXXXXSDWICLTDELRVDLESN 483
+N+ S+WI LTD+LR+D++S+
Sbjct: 526 KNTENNSEALEEERERWTEMESEWISLTDDLRMDIDSH 563
>AT4G26660.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 13 plant
structures; EXPRESSED DURING: 7 growth stages; CONTAINS
InterPro DOMAIN/s: Kinesin-related protein
(InterPro:IPR010544); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G55520.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink). | chr4:13448754-13451814 FORWARD LENGTH=806
Length = 806
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 153/489 (31%), Positives = 223/489 (45%), Gaps = 93/489 (19%)
Query: 3 VAQMGVKMDTSKYVMSGKKRFDNEIDEEVNVGEEDIRQLRQQIDELYMSCEGNPKDISVS 62
++Q+ V ++ S +MS KR ++E +EV V ED+ +L + I++L+ S
Sbjct: 170 LSQLRVSINKS-LLMSCPKRDESE-GKEVIVDGEDVLELNKHIEKLHGSY---------- 217
Query: 63 EDCVPYYSVEESC-DTDMTSCDEIEKEEVCSKETSSDLC--HKD----SAAPEDTSRAIK 115
D V SC + D S D+ E+VCS++ + HKD P
Sbjct: 218 -DSVHSSFASASCYEADSMSGDD---EDVCSEDLEKPMHGNHKDVDFVDNDPSQLDNVEF 273
Query: 116 STFRESISVSSCCRSPILEEPLLSESPKISNIKRKSVAFSSSCLGSWNNVAEENSSSSIG 175
T IS+ S S +LEEP+ SESPK N++ KSVA S+ + NV+E SS+IG
Sbjct: 274 DTTGSGISIRSQLPSCVLEEPIFSESPKFKNVQ-KSVAASTKFSANPRNVSE---SSNIG 329
Query: 176 QSFKKDELMQSSLRSSKVFPGPTESLAASLQRGLQIIDHHQRNSALNKSLASFSFEHLTL 235
++ Q S SK GPT+SLAASLQRGLQIID+HQ +S S SFSF H+ L
Sbjct: 330 DM----KVNQISPCMSKKVSGPTDSLAASLQRGLQIIDYHQGSSLSKSSSVSFSFGHMAL 385
Query: 236 TPCPEIDKGDSCDSTIQQKKYSIDERTATLLCESCRIKICDKEDSIKVKDSLKSLSDTAE 295
PC E + ++ + ++ K S ++ LLC SCR K+ D+E + T E
Sbjct: 386 KPCAEGENLNASVQSFRKDKASEGGLSSILLCLSCRKKV-DQEAEV-----------TEE 433
Query: 296 AGNQDGLTANVPNDLEMAKSIIREKELERLCKEQAARIEELNQLVEKLKGEKEINSIVVY 355
AG+ EK L+ +C EQAA+IEEL L+ K ++ +
Sbjct: 434 AGSN-------------------EKHLKNMCMEQAAKIEELTLLLRKSDDGEDGTEFIKE 474
Query: 356 GQEXXXXXXXXXXXXHLPDNXXXXXXXXXXXXXFDQRNCSFDATEKEELLKEIQNLRSKL 415
E F + N F+ +EKE LLKEI +L+SKL
Sbjct: 475 TYE-----------------------TKQISEEFGKTN--FEVSEKEALLKEIADLKSKL 509
Query: 416 QLYNDAPAKMSTDXXXXXXXXXXXXXXXXXVFSN-HNAXXXXXXXXXXXXXXSDWICLTD 474
Q P K + + V N N+ S+WI LTD
Sbjct: 510 Q-----PTKSTDNLRSSLLLRSIQMRKSIDVSRNGENSDDLAKEREMWTEMESEWISLTD 564
Query: 475 ELRVDLESN 483
+LR+D++++
Sbjct: 565 DLRMDIDNH 573
>AT3G23670.1 | Symbols: PAKRP1L, KINESIN-12B |
phragmoplast-associated kinesin-related protein,
putative | chr3:8519290-8525055 FORWARD LENGTH=1313
Length = 1313
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 13/242 (5%)
Query: 122 ISVSSCCRSPILEEPLLSESPKISNIKRKSVAFSSSCLGSWNNVAEENSSS------SIG 175
+SV+ SP+L P S SPKI N RKS+ +S S ++ N + S
Sbjct: 669 LSVAPVSVSPVLIPPTESASPKIRN-SRKSLRTTSMSTASQKDIERANQLTPEVVEPSPA 727
Query: 176 QSFKKDELMQS-SLRSSKVFPGPTESLAASLQRGLQIIDHHQRNSALNKSLASFSFEHLT 234
S + L + S + S+ FP PT LAASL RG++++D +++++AL +S S++ L
Sbjct: 728 MSTEVLNLYSALSTKKSEAFPVPTRQLAASLHRGMKLLDSYRQSTALRRSTFRLSYKALE 787
Query: 235 LTPCPEIDKGDSCDSTIQQKKYSIDERTATLLCESCRIKI-CDKEDSIKVKDSLKSLSDT 293
P + K D T Q ++ + +LC C+ + CD ++ + D
Sbjct: 788 CKPSTVLSKADVGVQTYPQADEIAEDNSKEVLCSRCKCRAECDAQEISDTSNLQLVPIDN 847
Query: 294 AEAGNQDGLTANVPNDLE--MAKSIIREKELERLCKEQAARIEELNQLVEKLKGEKEINS 351
+E + VP +E +A SI RE +E C +QA+ I +LN+LV++ K E+E N+
Sbjct: 848 SEGSEKSNF--QVPKAVEKVLAGSIRREMAMEEFCTKQASEISQLNRLVQQYKHERECNA 905
Query: 352 IV 353
I+
Sbjct: 906 II 907
>AT4G14150.1 | Symbols: PAKRP1, KINESIN-12A |
phragmoplast-associated kinesin-related protein 1 |
chr4:8158645-8165008 REVERSE LENGTH=1292
Length = 1292
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 145/288 (50%), Gaps = 25/288 (8%)
Query: 78 DMTSCDEIEKEEVCSKETSSDLCHKDSAAPEDTSRAIKSTFRESISVSSCCRSPILEEPL 137
D++SC ++ ++V TS+++ D D + ++ S+ + +P+L+ P
Sbjct: 623 DVSSCPDLVPQDV----TSANVLIADGV---DDPEHLVNSASPSLCIDPVGATPVLKSPT 675
Query: 138 LSESPKISNIKRKSVAFSSSCLGSWN-----NVAEENSSSSIGQSFKKDELMQS-SLRSS 191
LS SP I N RKS+ S S N+ E + S S K + + S + S
Sbjct: 676 LSVSPTIRN-SRKSLKTSELSTASQKDSEGENLVTEAADPSPATSKKMNNCSSALSTQKS 734
Query: 192 KVFPGPTESLAASLQRGLQIIDHHQRNSALNKSLASFSFEHLTLTPCPEIDKGDSCDSTI 251
KVFP TE LA+SL +G+++++ + +++A +S FSF+ P I K D+ TI
Sbjct: 735 KVFPVRTERLASSLHKGIKLLESYCQSTAQRRSTYRFSFKAPDSEPSTSISKADAGVQTI 794
Query: 252 QQKKYSIDERTATLLCESCRIKICDKEDSIKVKDSLKSLS----DTAEAGNQDGLTANVP 307
+E T LC C+ K ++ D+ ++ D + +L D +E + VP
Sbjct: 795 PGADAISEENTKEFLC--CKCKCREQFDAQQMGD-MPNLQLVPVDNSEVAEKS--KNQVP 849
Query: 308 NDLE--MAKSIIREKELERLCKEQAARIEELNQLVEKLKGEKEINSIV 353
+E +A SI RE LE C +QA+ I +LN+LV++ K E+E N+I+
Sbjct: 850 KAVEKVLAGSIRREMALEEFCTKQASEITQLNRLVQQYKHERECNAII 897