Miyakogusa Predicted Gene
- Lj0g3v0328139.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0328139.1 Non Chatacterized Hit- tr|C5YDN7|C5YDN7_SORBI
Putative uncharacterized protein Sb06g004750
OS=Sorghu,42.66,3e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Kinesin-related,Kinesin-related conserved domain; s,CUFF.22335.1
(187 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G26660.1 | Symbols: | INVOLVED IN: biological_process unknow... 179 1e-45
AT5G55520.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Kinesin-re... 178 1e-45
AT5G55520.2 | Symbols: | CONTAINS InterPro DOMAIN/s: Kinesin-re... 178 2e-45
AT3G20150.1 | Symbols: | Kinesin motor family protein | chr3:70... 145 2e-35
AT4G14150.1 | Symbols: PAKRP1, KINESIN-12A | phragmoplast-associ... 119 2e-27
AT3G23670.1 | Symbols: PAKRP1L, KINESIN-12B | phragmoplast-assoc... 114 3e-26
AT3G23670.2 | Symbols: PAKRP1L, KINESIN-12B | phragmoplast-assoc... 114 4e-26
>AT4G26660.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 13 plant
structures; EXPRESSED DURING: 7 growth stages; CONTAINS
InterPro DOMAIN/s: Kinesin-related protein
(InterPro:IPR010544); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G55520.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink). | chr4:13448754-13451814 FORWARD LENGTH=806
Length = 806
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 132/198 (66%), Gaps = 11/198 (5%)
Query: 1 MVEHYVDLQEKYNDLVAKHNAVMHGIAEVXXXXXXXXXXX--XXXXXXSLAAELSALRVE 58
+E Y +LQE YN+L KH+ +M GI +V + + ELSA+R E
Sbjct: 608 FIEQYTELQETYNELGEKHSVMMAGITDVKKAASKAAMNGRHGKRFAKAFSDELSAIRAE 667
Query: 59 REREAKFLKKENMSLKIQLRDTAEAVHAAGELLVRLREAEHAASVAEENFTKVQQDNEKL 118
+E+E + LKKEN +L+ QLRDTAEAV AAGELLVRLRE+E A V+EE F+ V+++ E+L
Sbjct: 668 KEKERELLKKENKNLRTQLRDTAEAVQAAGELLVRLRESEQALQVSEERFSVVEEEKERL 727
Query: 119 KRQMDKLKRKHKMEMITMKQYLADSKLPESA-QQPLFREDSDGAQK------NTSPYAD- 170
K+QM++LK KHK E+ TMKQYLA+SKLP SA QP ++++ D ++ + D
Sbjct: 728 KKQMEQLKSKHKTEIGTMKQYLAESKLPGSALLQPWYKDEEDEIEQVSEHETGAVSFDDY 787
Query: 171 -DDQAWRAEFGAIYQDHY 187
DDQAWRAEFGA YQDH+
Sbjct: 788 EDDQAWRAEFGATYQDHH 805
>AT5G55520.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Kinesin-related protein (InterPro:IPR010544); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G26660.1); Has 32425 Blast hits to 20462
proteins in 1550 species: Archae - 335; Bacteria - 3392;
Metazoa - 16996; Fungi - 2645; Plants - 1561; Viruses -
54; Other Eukaryotes - 7442 (source: NCBI BLink). |
chr5:22488205-22491187 REVERSE LENGTH=805
Length = 805
Score = 178 bits (452), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 129/200 (64%), Gaps = 14/200 (7%)
Query: 1 MVEHYVDLQEKYNDLVAKHNAVMHGIAEVXXXXXXXXXXXXXXX--XXSLAAELSALRVE 58
+E Y +LQEKY++L +H+ M GI +V + +AEL+A+R E
Sbjct: 602 FIEQYTELQEKYDELDERHSVTMAGIVDVKKAAAKAALKGRHGKRFAKAFSAELTAIRAE 661
Query: 59 REREAKFLKKENMSLKIQLRDTAEAVHAAGELLVRLREAEHAASVAEENFTKVQQDNEKL 118
+E+E +FLKKEN LKIQLRDT EAV AAGELLVRLREAE A +EE F ++++N+KL
Sbjct: 662 KEKEREFLKKENKGLKIQLRDTVEAVQAAGELLVRLREAEQAVQSSEERFGIMEEENDKL 721
Query: 119 KRQMDKLKRKHKMEMITMKQYLADSKLPESAQQPLFREDSDGA----------QKNTSPY 168
K+QM+KLK KHK EM TMKQYLA+SKLP SA + F+E+ + Y
Sbjct: 722 KQQMEKLKSKHKTEMSTMKQYLAESKLPGSALEAWFKENEQEEEEEHVSSSEHRTGVVSY 781
Query: 169 AD--DDQAWRAEFGAIYQDH 186
+ DDQAWR+EFGAIYQDH
Sbjct: 782 DNYTDDQAWRSEFGAIYQDH 801
>AT5G55520.2 | Symbols: | CONTAINS InterPro DOMAIN/s:
Kinesin-related protein (InterPro:IPR010544); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G26660.1); Has 31032 Blast hits to 19733
proteins in 1535 species: Archae - 330; Bacteria - 3150;
Metazoa - 16413; Fungi - 2511; Plants - 1475; Viruses -
48; Other Eukaryotes - 7105 (source: NCBI BLink). |
chr5:22488205-22491187 REVERSE LENGTH=801
Length = 801
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 129/200 (64%), Gaps = 14/200 (7%)
Query: 1 MVEHYVDLQEKYNDLVAKHNAVMHGIAEVXXXXXXXXXXXXXXX--XXSLAAELSALRVE 58
+E Y +LQEKY++L +H+ M GI +V + +AEL+A+R E
Sbjct: 598 FIEQYTELQEKYDELDERHSVTMAGIVDVKKAAAKAALKGRHGKRFAKAFSAELTAIRAE 657
Query: 59 REREAKFLKKENMSLKIQLRDTAEAVHAAGELLVRLREAEHAASVAEENFTKVQQDNEKL 118
+E+E +FLKKEN LKIQLRDT EAV AAGELLVRLREAE A +EE F ++++N+KL
Sbjct: 658 KEKEREFLKKENKGLKIQLRDTVEAVQAAGELLVRLREAEQAVQSSEERFGIMEEENDKL 717
Query: 119 KRQMDKLKRKHKMEMITMKQYLADSKLPESAQQPLFREDSDGA----------QKNTSPY 168
K+QM+KLK KHK EM TMKQYLA+SKLP SA + F+E+ + Y
Sbjct: 718 KQQMEKLKSKHKTEMSTMKQYLAESKLPGSALEAWFKENEQEEEEEHVSSSEHRTGVVSY 777
Query: 169 AD--DDQAWRAEFGAIYQDH 186
+ DDQAWR+EFGAIYQDH
Sbjct: 778 DNYTDDQAWRSEFGAIYQDH 797
>AT3G20150.1 | Symbols: | Kinesin motor family protein |
chr3:7031412-7036499 FORWARD LENGTH=1114
Length = 1114
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 118/159 (74%), Gaps = 1/159 (0%)
Query: 1 MVEHYVDLQEKYNDLVAKHNAVMHGIAEVXXXXXXXXXXXXXXX-XXSLAAELSALRVER 59
VEHY +LQEKYNDL +KH A + I E+ SLA+ELSALRVER
Sbjct: 949 FVEHYTELQEKYNDLCSKHKATVEWITELKKAVAKAGKKGCGSRFAKSLASELSALRVER 1008
Query: 60 EREAKFLKKENMSLKIQLRDTAEAVHAAGELLVRLREAEHAASVAEENFTKVQQDNEKLK 119
ERE LKKEN+SLKIQLR+TAEAVH AGE+LVRLREAE +AS AEE F +V+++NEKLK
Sbjct: 1009 ERERDLLKKENISLKIQLRNTAEAVHTAGEVLVRLREAEQSASAAEEKFNEVEEENEKLK 1068
Query: 120 RQMDKLKRKHKMEMITMKQYLADSKLPESAQQPLFREDS 158
++M+KLKR+HK+E++T+K+ L + LPESA QPL + +S
Sbjct: 1069 KKMEKLKRRHKLEVVTIKKSLKQNTLPESALQPLHQRNS 1107
>AT4G14150.1 | Symbols: PAKRP1, KINESIN-12A | phragmoplast-associated
kinesin-related protein 1 | chr4:8158645-8165008 REVERSE
LENGTH=1292
Length = 1292
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 108/187 (57%), Gaps = 11/187 (5%)
Query: 1 MVEHYVDLQEKYNDLVAKHNAVMHGIAEVXXXXXXXXXXXXXXX-XXSLAAELSALRVER 59
M+E Y DL+EK+ L+A+H + GI +V +LAAE+SAL+VE+
Sbjct: 1092 MLEQYADLEEKHMQLLARHRRIQDGIDDVKKAAARAGVRGAESRFINALAAEISALKVEK 1151
Query: 60 EREAKFLKKENMSLKIQLRDTAEAVHAAGELLVRLREAEHAASVAEENFTKVQQDNEKLK 119
E+E ++L+ EN SL+ QLRDTAEA+ AAGELLVRL+EAE +VA++ + + +
Sbjct: 1152 EKERQYLRDENKSLQTQLRDTAEAIQAAGELLVRLKEAEEGLTVAQKRAMDAEYEAAEAY 1211
Query: 120 RQMDKLKRKHKMEMITMKQYLADSKLPESAQQPLFREDSDGAQKNTSPY--ADDDQAWRA 177
RQ+DKLK+KH+ E+ T+ Q + S + E S + P A +Q WR
Sbjct: 1212 RQIDKLKKKHENEINTLNQLVPQSH--------IHNECSTKCDQAVEPSVNASSEQQWRD 1263
Query: 178 EFGAIYQ 184
EF +Y+
Sbjct: 1264 EFEPLYK 1270
>AT3G23670.1 | Symbols: PAKRP1L, KINESIN-12B | phragmoplast-associated
kinesin-related protein, putative | chr3:8519290-8525055
FORWARD LENGTH=1313
Length = 1313
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 7/188 (3%)
Query: 1 MVEHYVDLQEKYNDLVAKHNAVMHGIAEVXXXXXXXXXXXXXXX-XXSLAAELSALRVER 59
M+E Y DL+EK+ L+A+H + GI +V +LAAE+SAL+V+R
Sbjct: 1107 MIEQYADLEEKHIQLLARHRRIREGIDDVKKAAARAGVKGAESRFINALAAEISALKVQR 1166
Query: 60 EREAKFLKKENMSLKIQLRDTAEAVHAAGELLVRLREAEHAASVAEENFTKVQQDNEKLK 119
E+E ++ + EN SL+ QLRDTAEAV AAGELLVR +EAE + A++ + + +
Sbjct: 1167 EKEVRYFRDENKSLQSQLRDTAEAVQAAGELLVRFKEAEEGLTFAQKRAMDAEYEASEAY 1226
Query: 120 RQMDKLKRKHKMEMITM-KQYLADSKLP-ESAQQPLFREDSDGAQKNTSPYADD-DQAWR 176
+++DKLKRK++ E+ T+ +Q+ A+ + P ES Q + D K P A D D WR
Sbjct: 1227 KKVDKLKRKYETEISTVNQQHNAEPQNPIESLQASC---NDDAMAKYDEPSASDGDNQWR 1283
Query: 177 AEFGAIYQ 184
EF Y+
Sbjct: 1284 EEFQPFYK 1291
>AT3G23670.2 | Symbols: PAKRP1L, KINESIN-12B |
phragmoplast-associated kinesin-related protein,
putative | chr3:8519290-8525055 FORWARD LENGTH=971
Length = 971
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 110/188 (58%), Gaps = 7/188 (3%)
Query: 1 MVEHYVDLQEKYNDLVAKHNAVMHGIAEVXXXXXXXXXXXXXXX-XXSLAAELSALRVER 59
M+E Y DL+EK+ L+A+H + GI +V +LAAE+SAL+V+R
Sbjct: 765 MIEQYADLEEKHIQLLARHRRIREGIDDVKKAAARAGVKGAESRFINALAAEISALKVQR 824
Query: 60 EREAKFLKKENMSLKIQLRDTAEAVHAAGELLVRLREAEHAASVAEENFTKVQQDNEKLK 119
E+E ++ + EN SL+ QLRDTAEAV AAGELLVR +EAE + A++ + + +
Sbjct: 825 EKEVRYFRDENKSLQSQLRDTAEAVQAAGELLVRFKEAEEGLTFAQKRAMDAEYEASEAY 884
Query: 120 RQMDKLKRKHKMEMITM-KQYLADSKLP-ESAQQPLFREDSDGAQKNTSPYADD-DQAWR 176
+++DKLKRK++ E+ T+ +Q+ A+ + P ES Q + D K P A D D WR
Sbjct: 885 KKVDKLKRKYETEISTVNQQHNAEPQNPIESLQASC---NDDAMAKYDEPSASDGDNQWR 941
Query: 177 AEFGAIYQ 184
EF Y+
Sbjct: 942 EEFQPFYK 949