Miyakogusa Predicted Gene

Lj0g3v0327789.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327789.2 Non Chatacterized Hit- tr|I1MAK8|I1MAK8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,68.89,0,no
description,Ribonuclease II/R; RIBONUCLEASE_II,Ribonuclease II/R,
conserved site; seg,NULL; SUBFA,CUFF.22317.2
         (1086 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G77680.1 | Symbols:  | Ribonuclease II/R family protein | chr...   972   0.0  
AT2G17510.1 | Symbols: EMB2763 | ribonuclease II family protein ...   292   1e-78
AT2G17510.2 | Symbols: EMB2763 | ribonuclease II family protein ...   268   2e-71
AT5G02250.1 | Symbols: EMB2730, RNR1, ATMTRNASEII | Ribonuclease...    78   3e-14

>AT1G77680.1 | Symbols:  | Ribonuclease II/R family protein |
            chr1:29192188-29195963 REVERSE LENGTH=1055
          Length = 1055

 Score =  972 bits (2514), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/1103 (49%), Positives = 694/1103 (62%), Gaps = 78/1103 (7%)

Query: 4    AVEGSSMGKKRRSNRRTKQNPSSFSASEVKETPGGSSECLGKNDTPVPSTASLSNPLKQQ 63
            +VE    G K++ NR  KQN  S   S V        E L   D+        ++  KQQ
Sbjct: 9    SVERIENGHKKKRNRPQKQNRRS-KQSSVPIEDAHVEESLDGRDSSRSKAKDSTSSSKQQ 67

Query: 64   GTNVYSTNEQVLPQASNFVFGSVPPMLIN-----EHVQPVLQNIQMPGGGIDSISLSDPI 118
              N   T+E    +ASN  F S+PPM            P+L + ++    + S S  DP 
Sbjct: 68   RPN---TDELEAMRASNVAFNSMPPMRAESGYPRRSASPLLSSPEV-SKQLLSKSCPDPR 123

Query: 119  GCRGSSGRNSKTKYPLG-----KYFSPHWSQEAVEKALERGDVLKARFHVNVHNTLEAYC 173
             C  S G N +    +      K FS HWS +AV +ALE+G+  KA F VN HN  EAYC
Sbjct: 124  ACEQSPGMNGELFQQIEGSSQRKIFSSHWSLDAVTEALEKGEAFKALFRVNAHNRNEAYC 183

Query: 174  KIDGVPTDVLINGFLAQNRAVEGDIVAVKIDPLPLWTKMKGPIVNGNNMATLESCNLV-E 232
            KIDGVPTD+LING + Q+RAVEGD V +K+DPL LW KMKG +    + A  E  N   E
Sbjct: 184  KIDGVPTDILINGNVCQSRAVEGDTVVIKLDPLSLWPKMKGFVTE--SAAKPEGTNSPPE 241

Query: 233  DDGAGVNNCKGIGKVDADYESAHSRSPGKNKEDSDDHSSTPDKSSPFPETRCIYEDNTSQ 292
             D        GI  V+  +E   S+                +KSS              +
Sbjct: 242  KDDKKARQKNGIDVVEG-FEDGFSK----------------NKSSVI-----------GK 273

Query: 293  GSANHINPLGLASHDGSDGTHCAASYSLEMNSCNGQGKVINAVEKMCLLVKSFPSKRPTG 352
            G+ N + P    S D      C  S+  +  +C+       AV+K+C ++ SFP KRPTG
Sbjct: 274  GAKNGVTPSSPPSLDS-----CLGSFCEQKGNCS-------AVDKLCGILSSFPHKRPTG 321

Query: 353  RVVAIVERSPRREGIVGHLNDIYCLCCKTYSREITK----LCEPEYFQLTPIDPKFPSVI 408
            +VVA+VE+S  R+ IVG L+    +  K    +  K    L + EY QL P DP+FP +I
Sbjct: 322  QVVAVVEKSLVRDSIVGLLDVKGWIHYKESDPKRCKSPLSLSDDEYVQLMPADPRFPKLI 381

Query: 409  ILMRDLPECLKKRWECADMTMERDLVAVQIDDWIEERPFPEGHVLHIFGRGGEVQPQLDA 468
            +    LP  ++ R E  D  +E +LVA QI DW E  PFP   + H+FGRG E++PQ++A
Sbjct: 382  VPFHVLPGSIRARLENLDPNLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQINA 441

Query: 469  ILFQNAICLSEFSPEALSCLPCVPWELPPKEIKSRKDLRNLCVFTIDPSTATDLDDALSI 528
            IL+QN++C S+FSP +L+ LP VPWE+P +E++ RKDLR+LCV TIDPSTATDLDDALS+
Sbjct: 442  ILYQNSVCDSDFSPGSLTSLPRVPWEVPEEEVQRRKDLRDLCVLTIDPSTATDLDDALSV 501

Query: 529  EKLPSGNYRVGVHIADVSYFVLPHTALDREAQSRSTSVYMSQRKLPMLPALFSENIGSLN 588
            + LP G +RVGVHIADVSYFVLP TALD EA+ RSTSVY+ QRK+ MLP L SEN+GSL+
Sbjct: 502  QSLPGGFFRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISMLPPLLSENVGSLS 561

Query: 589  PGVDRLTVSILLDITDAGDVVDRWVGRAVIQSCCKLSYEHAQFIIDCQISDFYGEDFPKV 648
            PG DRL  SIL D+   GDV+DRW+GR +I+SCCKLSY+HAQ IID + SD     +P +
Sbjct: 562  PGADRLAFSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDGK-SDVAENGWPAL 620

Query: 649  HGRFEWPDVISSLKSLYAISDVLKHKRFTDGALRLDNPKVAILFDENGIPCDITFSERKE 708
            HG F+W DV  S+K L  IS  L+ KRF +GAL+L+N K   LFDE+G+P D     RK 
Sbjct: 621  HGSFKWCDVTRSVKQLSEISTTLRQKRFRNGALQLENSKPVFLFDEHGVPYDFVTCSRKG 680

Query: 709  SNLLVEEYMLLANRTAAEVICRAYPDIALLRRHPEPNMRKLRELMAFCEKHGLELNTSSS 768
            SN LVEE+MLLAN TAAEVI +AY   +LLRRHPEPN RKL+E   FC KHG++L+ SSS
Sbjct: 681  SNFLVEEFMLLANMTAAEVISQAYRASSLLRRHPEPNTRKLKEFEGFCSKHGMDLDISSS 740

Query: 769  GQFHRSLEKAKEKLKDDPVLYDILISYATKPMLLASYFCSGDLKDNEHEWGHYALAVPLY 828
            GQ   SLEK    LKDD V  DIL +YA KPM LASYFC+G+LKD+  EWGHYALAVPLY
Sbjct: 741  GQLQDSLEKITGNLKDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYALAVPLY 800

Query: 829  THFTSPLRRYPDIIVHRTLLAAIEVEELYMKHQKVMKVNKEVRMQKKCFTGINFEKNAAE 888
            THFTSPLRRYPDI+VHR L AA+E EELY K ++       +   + CFTGI+F K+AAE
Sbjct: 801  THFTSPLRRYPDIVVHRALAAALEAEELYSKQKQTA-----IDEGRSCFTGIHFNKDAAE 855

Query: 889  SMEGREALAAASMKHGVPCSEVLADIAAYCNERKLASRNVKDACDKLYIWFLLKNKGALI 948
            S+EG+EAL+ A++KHGVP +E+L+D+AAYCNERKLA+R V+DACDKLY WF+LK K    
Sbjct: 856  SIEGKEALSVAALKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVLKQKEIFP 915

Query: 949  SEARVMGLGPRFMSIYIQKLAIERRINYAEVEGLKVEWLEATSTLVLSMNPKHAFRKGSP 1008
             EARVM LG RFM++YI KL IERRI Y ++EGL  +WLEATSTL++    K   ++G  
Sbjct: 916  CEARVMNLGSRFMTVYISKLGIERRIYYDQIEGLCADWLEATSTLIVD---KLYSKRGGR 972

Query: 1009 NMLRAFEE-VALVT------XXXXXXXXXXXXXXXXXXXXEIEPAVFPLTVRVLSTIPVV 1061
               +  +E V LV+                          E+ PAVFPLT+++ STIPVV
Sbjct: 973  GFFKPMKEAVYLVSPCEVCVAKCSALSVHDTESPEAVSIDEVAPAVFPLTIQLFSTIPVV 1032

Query: 1062 LLPVGGDYGPVDIRVRLYMSSYF 1084
            L  VGGD GP+DI  RLYMSSY+
Sbjct: 1033 LHAVGGDDGPLDIGARLYMSSYY 1055


>AT2G17510.1 | Symbols: EMB2763 | ribonuclease II family protein |
           chr2:7609395-7615881 REVERSE LENGTH=933
          Length = 933

 Score =  292 bits (747), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 175/512 (34%), Positives = 274/512 (53%), Gaps = 48/512 (9%)

Query: 349 RPTGRVVAIVERSPRREGIVGHLNDIYCLCCKTYSREITKLCEPEYFQLTPIDPKFPSVI 408
           RP+GRVV ++ R+             YC   +  S             ++  D + P + 
Sbjct: 336 RPSGRVVGVIRRNWHS----------YCGSLEPMSLPAGSGGTAHALFVSK-DRRIPKIR 384

Query: 409 ILMRDLPECLKKRWECADMTMERDLVAVQIDDWIEERPFPEGHVLHIFGRGGEVQPQLDA 468
           I  R L   L  R            + V +D W  +  +P GH +   G+ G+ + + + 
Sbjct: 385 INTRQLQNLLDMR------------IVVAVDSWDRQSRYPSGHYVRPIGKIGDKETETEV 432

Query: 469 ILFQNAICLSEFSPEALSCLPCVPWELPPKEIKS--RKDLRNLCVFTIDPSTATDLDDAL 526
           +L +N +  S FS + L+CLP +PW +  +++ +  R+DLR+L VF++DP    D+DDAL
Sbjct: 433 VLIENDVDYSPFSSQVLACLPPLPWSVSSEDVSNPVRQDLRHLLVFSVDPPGCKDIDDAL 492

Query: 527 SIEKLPSGNYRVGVHIADVSYFVLPHTALDREAQSRSTSVYMSQRKLPMLPALFSENIGS 586
               LP+GN+ +GVHIADV+ FV P T LD EA  R TSVY+ +R++ MLP   +E+I S
Sbjct: 493 HCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERRIDMLPKPLTEDICS 552

Query: 587 LNPGVDRLTVSILLDITDAGDVVDRWVGRAVIQSCCKLSYEHAQFII-DCQISDFYGEDF 645
           L   V+RL  S++ +++   +++     +++I+S   LSY  AQ  + D +++D    D 
Sbjct: 553 LRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYIEAQARMDDSRLTDSLTTD- 611

Query: 646 PKVHGRFEWPDVISSLKSLYAISDVLKHKRFTDGALRLDNPKVAILFD-ENGIPCDITFS 704
                          L+++  ++ +++ +R   GAL L + +V    D EN  P +I   
Sbjct: 612 ---------------LRNMNTLAKIMRQRRIDRGALTLASAEVKFDIDPENHDPLNIGMY 656

Query: 705 ERKESNLLVEEYMLLANRTAAEVICRAYPDIALLRRHPEPNMRKLRELMAFCEKHGLELN 764
           +  E+N +VEE+ML AN + A  I + +P  +LLRRHP P    L  L+      GL L+
Sbjct: 657 QILEANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLEPLLRTAAAIGLTLD 716

Query: 765 TSSSGQFHRSLEKAKEKLKDDPVLYDILISYATKPMLLASYFCSGDLKDNEHEWGHYALA 824
            SSS     SL++A   + +DP    ++   AT+ M  A YFCSGDL  +  E+ HY LA
Sbjct: 717 VSSSKALADSLDRA---VGEDPYFNKLIRILATRCMTQAVYFCSGDL--SPPEYHHYGLA 771

Query: 825 VPLYTHFTSPLRRYPDIIVHRTLLAAIEVEEL 856
            PLYTHFTSP+RRY D+ VHR L A++ + +L
Sbjct: 772 APLYTHFTSPIRRYADVFVHRLLAASLGIYKL 803


>AT2G17510.2 | Symbols: EMB2763 | ribonuclease II family protein |
           chr2:7609395-7616242 REVERSE LENGTH=1012
          Length = 1012

 Score =  268 bits (684), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 174/546 (31%), Positives = 274/546 (50%), Gaps = 82/546 (15%)

Query: 349 RPTGRVVAIVERSPRREGIVGHLNDIYCLCCKTYSREITKLCEPEYFQLTPIDPKFPSVI 408
           RP+GRVV ++ R+             YC   +  S             ++  D + P + 
Sbjct: 381 RPSGRVVGVIRRNWHS----------YCGSLEPMSLPAGSGGTAHALFVSK-DRRIPKIR 429

Query: 409 ILMRDLPECLKKRWECADMTMERDLVAVQIDDWIEERPFPEGHVLHIFGRGGEVQPQLDA 468
           I  R L   L  R            + V +D W  +  +P GH +   G+ G+ + + + 
Sbjct: 430 INTRQLQNLLDMR------------IVVAVDSWDRQSRYPSGHYVRPIGKIGDKETETEV 477

Query: 469 ----------------------ILFQNAICLSEFSPEALSCLPCVPWELPPKEIKS--RK 504
                                 +L +N +  S FS + L+CLP +PW +  +++ +  R+
Sbjct: 478 RDHINLFDSILVGVRWARVGKVVLIENDVDYSPFSSQVLACLPPLPWSVSSEDVSNPVRQ 537

Query: 505 DLRNLCVFTIDPSTATDLDDALSIEKLPSGNYRVGV------------HIADVSYFVLPH 552
           DLR+L VF++DP    D+DDAL    LP+GN+ +GV            +IADV+ FV P 
Sbjct: 538 DLRHLLVFSVDPPGCKDIDDALHCTSLPNGNFELGVRILESSDSHKYDYIADVTNFVHPG 597

Query: 553 TALDREAQSRSTSVYMSQRKLPMLPALFSENIGSLNPGVDRLTVSILLDITDAGDVVDRW 612
           T LD EA  R TSVY+ +R++ MLP   +E+I SL   V+RL  S++ +++   +++   
Sbjct: 598 TPLDDEASKRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTR 657

Query: 613 VGRAVIQSCCKLSYEHAQFII-DCQISDFYGEDFPKVHGRFEWPDVISSLKSLYAISDVL 671
             +++I+S   LSY  AQ  + D +++D    D                L+++  ++ ++
Sbjct: 658 FTKSIIKSSAALSYIEAQARMDDSRLTDSLTTD----------------LRNMNTLAKIM 701

Query: 672 KHKRFTDGALRLDNPKVAILFD-ENGIPCDITFSERKESNLLVEEYMLLANRTAAEVICR 730
           + +R   GAL L + +V    D EN  P +I   +  E+N +VEE+ML AN + A  I +
Sbjct: 702 RQRRIDRGALTLASAEVKFDIDPENHDPLNIGMYQILEANQMVEEFMLAANVSVAGQILK 761

Query: 731 AYPDIALLRRHPEPNMRKLRELMAFCEKHGLELNTSSSGQFHRSLEKAKEKLKDDPVLYD 790
            +P  +LLRRHP P    L  L+      GL L+ SSS     SL++A   + +DP    
Sbjct: 762 LFPSCSLLRRHPTPTREMLEPLLRTAAAIGLTLDVSSSKALADSLDRA---VGEDPYFNK 818

Query: 791 ILISYATKPMLLASYFCSGDLKDNEHEWGHYALAVPLYTHFTSPLRRYPDIIVHRTLLAA 850
           ++   AT+ M  A YFCSGDL  +  E+ HY LA PLYTHFTSP+RRY D+ VHR L A+
Sbjct: 819 LIRILATRCMTQAVYFCSGDL--SPPEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAAS 876

Query: 851 IEVEEL 856
           + + +L
Sbjct: 877 LGIYKL 882


>AT5G02250.1 | Symbols: EMB2730, RNR1, ATMTRNASEII | Ribonuclease
           II/R family protein | chr5:454902-459063 FORWARD
           LENGTH=803
          Length = 803

 Score = 78.2 bits (191), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 70/127 (55%)

Query: 503 RKDLRNLCVFTIDPSTATDLDDALSIEKLPSGNYRVGVHIADVSYFVLPHTALDREAQSR 562
           R DL +L V+ ID   A +LDDALS  +L  G  ++ +H+AD + +V P + +DREA+ R
Sbjct: 399 RIDLTHLKVYAIDVDEADELDDALSATRLQDGRIKIWIHVADPARYVTPGSKVDREARRR 458

Query: 563 STSVYMSQRKLPMLPALFSENIGSLNPGVDRLTVSILLDITDAGDVVDRWVGRAVIQSCC 622
            TSV++     PM P   +    SL  G +   VS+ + +   G + +  V  ++I+   
Sbjct: 459 GTSVFLPTATYPMFPEKLAMEGMSLRQGENCNAVSVSVVLRSDGCITEYSVDNSIIRPTY 518

Query: 623 KLSYEHA 629
            L+YE A
Sbjct: 519 MLTYESA 525