Miyakogusa Predicted Gene

Lj0g3v0327789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0327789.1 Non Chatacterized Hit- tr|I1MAK8|I1MAK8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,69.56,0,no
description,Ribonuclease II/R; RIBONUCLEASE_II,Ribonuclease II/R,
conserved site; seg,NULL; SUBFA,CUFF.22317.1
         (1077 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G77680.1 | Symbols:  | Ribonuclease II/R family protein | chr...   971   0.0  
AT2G17510.1 | Symbols: EMB2763 | ribonuclease II family protein ...   292   1e-78
AT2G17510.2 | Symbols: EMB2763 | ribonuclease II family protein ...   268   2e-71
AT5G02250.1 | Symbols: EMB2730, RNR1, ATMTRNASEII | Ribonuclease...    78   3e-14

>AT1G77680.1 | Symbols:  | Ribonuclease II/R family protein |
            chr1:29192188-29195963 REVERSE LENGTH=1055
          Length = 1055

 Score =  971 bits (2509), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/1096 (49%), Positives = 691/1096 (63%), Gaps = 78/1096 (7%)

Query: 2    GKKRRSNRRTKQNPSSFSASEVKETPGGSSECLGKNDTPVPSTASLSNPLKQQGTNVYST 61
            G K++ NR  KQN  S   S V        E L   D+        ++  KQQ  N   T
Sbjct: 16   GHKKKRNRPQKQNRRS-KQSSVPIEDAHVEESLDGRDSSRSKAKDSTSSSKQQRPN---T 71

Query: 62   NEQVLPQASNFVFGSVPPMLIN-----EHVQPVLQNIQMPGGGIDSISLSDPIGCRGSSG 116
            +E    +ASN  F S+PPM            P+L + ++    + S S  DP  C  S G
Sbjct: 72   DELEAMRASNVAFNSMPPMRAESGYPRRSASPLLSSPEV-SKQLLSKSCPDPRACEQSPG 130

Query: 117  RNSKTKYPLG-----KYFSPHWSQEAVEKALERGDVLKARFHVNVHNTLEAYCKIDGVPT 171
             N +    +      K FS HWS +AV +ALE+G+  KA F VN HN  EAYCKIDGVPT
Sbjct: 131  MNGELFQQIEGSSQRKIFSSHWSLDAVTEALEKGEAFKALFRVNAHNRNEAYCKIDGVPT 190

Query: 172  DVLINGFLAQNRAVEGDIVAVKIDPLPLWTKMKGPIVNGNNMATLESCNLV-EDDGAGVN 230
            D+LING + Q+RAVEGD V +K+DPL LW KMKG +    + A  E  N   E D     
Sbjct: 191  DILINGNVCQSRAVEGDTVVIKLDPLSLWPKMKGFVTE--SAAKPEGTNSPPEKDDKKAR 248

Query: 231  NCKGIGKVDADYESAHSRSPGKNKEDSDDHSSTPDKSSPFPETRCIYEDNTSQGSANHIN 290
               GI  V+  +E   S+                +KSS              +G+ N + 
Sbjct: 249  QKNGIDVVEG-FEDGFSK----------------NKSSVI-----------GKGAKNGVT 280

Query: 291  PLGLASHDGSDGTHCAASYSLEMNSCNGQGKVINAVEKMCLLVKSFPSKRPTGRVVAIVE 350
            P    S D      C  S+  +  +C+       AV+K+C ++ SFP KRPTG+VVA+VE
Sbjct: 281  PSSPPSLDS-----CLGSFCEQKGNCS-------AVDKLCGILSSFPHKRPTGQVVAVVE 328

Query: 351  RSPRREGIVGHLNDIYCLCCKTYSREITK----LCEPEYFQLTPIDPKFPSVIILMRDLP 406
            +S  R+ IVG L+    +  K    +  K    L + EY QL P DP+FP +I+    LP
Sbjct: 329  KSLVRDSIVGLLDVKGWIHYKESDPKRCKSPLSLSDDEYVQLMPADPRFPKLIVPFHVLP 388

Query: 407  ECLKKRWECADMTMERDLVAVQIDDWIEERPFPEGHVLHIFGRGGEVQPQLDAILFQNAI 466
              ++ R E  D  +E +LVA QI DW E  PFP   + H+FGRG E++PQ++AIL+QN++
Sbjct: 389  GSIRARLENLDPNLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQINAILYQNSV 448

Query: 467  CLSEFSPEALSCLPCVPWELPPKEIKSRKDLRNLCVFTIDPSTATDLDDALSIEKLPSGN 526
            C S+FSP +L+ LP VPWE+P +E++ RKDLR+LCV TIDPSTATDLDDALS++ LP G 
Sbjct: 449  CDSDFSPGSLTSLPRVPWEVPEEEVQRRKDLRDLCVLTIDPSTATDLDDALSVQSLPGGF 508

Query: 527  YRVGVHIADVSYFVLPHTALDREAQSRSTSVYMSQRKLPMLPALFSENIGSLNPGVDRLT 586
            +RVGVHIADVSYFVLP TALD EA+ RSTSVY+ QRK+ MLP L SEN+GSL+PG DRL 
Sbjct: 509  FRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISMLPPLLSENVGSLSPGADRLA 568

Query: 587  VSILLDITDAGDVVDRWVGRAVIQSCCKLSYEHAQFIIDCQISDFYGEDFPKVHGRFEWP 646
             SIL D+   GDV+DRW+GR +I+SCCKLSY+HAQ IID + SD     +P +HG F+W 
Sbjct: 569  FSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDGK-SDVAENGWPALHGSFKWC 627

Query: 647  DVISSLKSLYAISDVLKHKRFTDGALRLDNPKVAILFDENGIPCDITFSERKESNLLVEE 706
            DV  S+K L  IS  L+ KRF +GAL+L+N K   LFDE+G+P D     RK SN LVEE
Sbjct: 628  DVTRSVKQLSEISTTLRQKRFRNGALQLENSKPVFLFDEHGVPYDFVTCSRKGSNFLVEE 687

Query: 707  YMLLANRTAAEVICRAYPDIALLRRHPEPNMRKLRELMAFCEKHGLELNTSSSGQFHRSL 766
            +MLLAN TAAEVI +AY   +LLRRHPEPN RKL+E   FC KHG++L+ SSSGQ   SL
Sbjct: 688  FMLLANMTAAEVISQAYRASSLLRRHPEPNTRKLKEFEGFCSKHGMDLDISSSGQLQDSL 747

Query: 767  EKAKEKLKDDPVLYDILISYATKPMLLASYFCSGDLKDNEHEWGHYALAVPLYTHFTSPL 826
            EK    LKDD V  DIL +YA KPM LASYFC+G+LKD+  EWGHYALAVPLYTHFTSPL
Sbjct: 748  EKITGNLKDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYALAVPLYTHFTSPL 807

Query: 827  RRYPDIIVHRTLLAAIEVEELYMKHQKVMKVNKEVRMQKKCFTGINFEKNAAESMEGREA 886
            RRYPDI+VHR L AA+E EELY K ++       +   + CFTGI+F K+AAES+EG+EA
Sbjct: 808  RRYPDIVVHRALAAALEAEELYSKQKQTA-----IDEGRSCFTGIHFNKDAAESIEGKEA 862

Query: 887  LAAASMKHGVPCSEVLADIAAYCNERKLASRNVKDACDKLYIWFLLKNKGALISEARVMG 946
            L+ A++KHGVP +E+L+D+AAYCNERKLA+R V+DACDKLY WF+LK K     EARVM 
Sbjct: 863  LSVAALKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVLKQKEIFPCEARVMN 922

Query: 947  LGPRFMSIYIQKLAIERRINYAEVEGLKVEWLEATSTLVLSMNPKHAFRKGSPNMLRAFE 1006
            LG RFM++YI KL IERRI Y ++EGL  +WLEATSTL++    K   ++G     +  +
Sbjct: 923  LGSRFMTVYISKLGIERRIYYDQIEGLCADWLEATSTLIVD---KLYSKRGGRGFFKPMK 979

Query: 1007 E-VALVT------XXXXXXXXXXXXXXXXXXXXEIEPAVFPLTVRVLSTIPVVLLPVGGD 1059
            E V LV+                          E+ PAVFPLT+++ STIPVVL  VGGD
Sbjct: 980  EAVYLVSPCEVCVAKCSALSVHDTESPEAVSIDEVAPAVFPLTIQLFSTIPVVLHAVGGD 1039

Query: 1060 YGPVDIRVRLYMSSYF 1075
             GP+DI  RLYMSSY+
Sbjct: 1040 DGPLDIGARLYMSSYY 1055


>AT2G17510.1 | Symbols: EMB2763 | ribonuclease II family protein |
           chr2:7609395-7615881 REVERSE LENGTH=933
          Length = 933

 Score =  292 bits (747), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 175/512 (34%), Positives = 274/512 (53%), Gaps = 48/512 (9%)

Query: 340 RPTGRVVAIVERSPRREGIVGHLNDIYCLCCKTYSREITKLCEPEYFQLTPIDPKFPSVI 399
           RP+GRVV ++ R+             YC   +  S             ++  D + P + 
Sbjct: 336 RPSGRVVGVIRRNWHS----------YCGSLEPMSLPAGSGGTAHALFVSK-DRRIPKIR 384

Query: 400 ILMRDLPECLKKRWECADMTMERDLVAVQIDDWIEERPFPEGHVLHIFGRGGEVQPQLDA 459
           I  R L   L  R            + V +D W  +  +P GH +   G+ G+ + + + 
Sbjct: 385 INTRQLQNLLDMR------------IVVAVDSWDRQSRYPSGHYVRPIGKIGDKETETEV 432

Query: 460 ILFQNAICLSEFSPEALSCLPCVPWELPPKEIKS--RKDLRNLCVFTIDPSTATDLDDAL 517
           +L +N +  S FS + L+CLP +PW +  +++ +  R+DLR+L VF++DP    D+DDAL
Sbjct: 433 VLIENDVDYSPFSSQVLACLPPLPWSVSSEDVSNPVRQDLRHLLVFSVDPPGCKDIDDAL 492

Query: 518 SIEKLPSGNYRVGVHIADVSYFVLPHTALDREAQSRSTSVYMSQRKLPMLPALFSENIGS 577
               LP+GN+ +GVHIADV+ FV P T LD EA  R TSVY+ +R++ MLP   +E+I S
Sbjct: 493 HCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERRIDMLPKPLTEDICS 552

Query: 578 LNPGVDRLTVSILLDITDAGDVVDRWVGRAVIQSCCKLSYEHAQFII-DCQISDFYGEDF 636
           L   V+RL  S++ +++   +++     +++I+S   LSY  AQ  + D +++D    D 
Sbjct: 553 LRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYIEAQARMDDSRLTDSLTTD- 611

Query: 637 PKVHGRFEWPDVISSLKSLYAISDVLKHKRFTDGALRLDNPKVAILFD-ENGIPCDITFS 695
                          L+++  ++ +++ +R   GAL L + +V    D EN  P +I   
Sbjct: 612 ---------------LRNMNTLAKIMRQRRIDRGALTLASAEVKFDIDPENHDPLNIGMY 656

Query: 696 ERKESNLLVEEYMLLANRTAAEVICRAYPDIALLRRHPEPNMRKLRELMAFCEKHGLELN 755
           +  E+N +VEE+ML AN + A  I + +P  +LLRRHP P    L  L+      GL L+
Sbjct: 657 QILEANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLEPLLRTAAAIGLTLD 716

Query: 756 TSSSGQFHRSLEKAKEKLKDDPVLYDILISYATKPMLLASYFCSGDLKDNEHEWGHYALA 815
            SSS     SL++A   + +DP    ++   AT+ M  A YFCSGDL  +  E+ HY LA
Sbjct: 717 VSSSKALADSLDRA---VGEDPYFNKLIRILATRCMTQAVYFCSGDL--SPPEYHHYGLA 771

Query: 816 VPLYTHFTSPLRRYPDIIVHRTLLAAIEVEEL 847
            PLYTHFTSP+RRY D+ VHR L A++ + +L
Sbjct: 772 APLYTHFTSPIRRYADVFVHRLLAASLGIYKL 803


>AT2G17510.2 | Symbols: EMB2763 | ribonuclease II family protein |
           chr2:7609395-7616242 REVERSE LENGTH=1012
          Length = 1012

 Score =  268 bits (684), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 174/546 (31%), Positives = 274/546 (50%), Gaps = 82/546 (15%)

Query: 340 RPTGRVVAIVERSPRREGIVGHLNDIYCLCCKTYSREITKLCEPEYFQLTPIDPKFPSVI 399
           RP+GRVV ++ R+             YC   +  S             ++  D + P + 
Sbjct: 381 RPSGRVVGVIRRNWHS----------YCGSLEPMSLPAGSGGTAHALFVSK-DRRIPKIR 429

Query: 400 ILMRDLPECLKKRWECADMTMERDLVAVQIDDWIEERPFPEGHVLHIFGRGGEVQPQLDA 459
           I  R L   L  R            + V +D W  +  +P GH +   G+ G+ + + + 
Sbjct: 430 INTRQLQNLLDMR------------IVVAVDSWDRQSRYPSGHYVRPIGKIGDKETETEV 477

Query: 460 ----------------------ILFQNAICLSEFSPEALSCLPCVPWELPPKEIKS--RK 495
                                 +L +N +  S FS + L+CLP +PW +  +++ +  R+
Sbjct: 478 RDHINLFDSILVGVRWARVGKVVLIENDVDYSPFSSQVLACLPPLPWSVSSEDVSNPVRQ 537

Query: 496 DLRNLCVFTIDPSTATDLDDALSIEKLPSGNYRVGV------------HIADVSYFVLPH 543
           DLR+L VF++DP    D+DDAL    LP+GN+ +GV            +IADV+ FV P 
Sbjct: 538 DLRHLLVFSVDPPGCKDIDDALHCTSLPNGNFELGVRILESSDSHKYDYIADVTNFVHPG 597

Query: 544 TALDREAQSRSTSVYMSQRKLPMLPALFSENIGSLNPGVDRLTVSILLDITDAGDVVDRW 603
           T LD EA  R TSVY+ +R++ MLP   +E+I SL   V+RL  S++ +++   +++   
Sbjct: 598 TPLDDEASKRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTR 657

Query: 604 VGRAVIQSCCKLSYEHAQFII-DCQISDFYGEDFPKVHGRFEWPDVISSLKSLYAISDVL 662
             +++I+S   LSY  AQ  + D +++D    D                L+++  ++ ++
Sbjct: 658 FTKSIIKSSAALSYIEAQARMDDSRLTDSLTTD----------------LRNMNTLAKIM 701

Query: 663 KHKRFTDGALRLDNPKVAILFD-ENGIPCDITFSERKESNLLVEEYMLLANRTAAEVICR 721
           + +R   GAL L + +V    D EN  P +I   +  E+N +VEE+ML AN + A  I +
Sbjct: 702 RQRRIDRGALTLASAEVKFDIDPENHDPLNIGMYQILEANQMVEEFMLAANVSVAGQILK 761

Query: 722 AYPDIALLRRHPEPNMRKLRELMAFCEKHGLELNTSSSGQFHRSLEKAKEKLKDDPVLYD 781
            +P  +LLRRHP P    L  L+      GL L+ SSS     SL++A   + +DP    
Sbjct: 762 LFPSCSLLRRHPTPTREMLEPLLRTAAAIGLTLDVSSSKALADSLDRA---VGEDPYFNK 818

Query: 782 ILISYATKPMLLASYFCSGDLKDNEHEWGHYALAVPLYTHFTSPLRRYPDIIVHRTLLAA 841
           ++   AT+ M  A YFCSGDL  +  E+ HY LA PLYTHFTSP+RRY D+ VHR L A+
Sbjct: 819 LIRILATRCMTQAVYFCSGDL--SPPEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAAS 876

Query: 842 IEVEEL 847
           + + +L
Sbjct: 877 LGIYKL 882


>AT5G02250.1 | Symbols: EMB2730, RNR1, ATMTRNASEII | Ribonuclease
           II/R family protein | chr5:454902-459063 FORWARD
           LENGTH=803
          Length = 803

 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 70/127 (55%)

Query: 494 RKDLRNLCVFTIDPSTATDLDDALSIEKLPSGNYRVGVHIADVSYFVLPHTALDREAQSR 553
           R DL +L V+ ID   A +LDDALS  +L  G  ++ +H+AD + +V P + +DREA+ R
Sbjct: 399 RIDLTHLKVYAIDVDEADELDDALSATRLQDGRIKIWIHVADPARYVTPGSKVDREARRR 458

Query: 554 STSVYMSQRKLPMLPALFSENIGSLNPGVDRLTVSILLDITDAGDVVDRWVGRAVIQSCC 613
            TSV++     PM P   +    SL  G +   VS+ + +   G + +  V  ++I+   
Sbjct: 459 GTSVFLPTATYPMFPEKLAMEGMSLRQGENCNAVSVSVVLRSDGCITEYSVDNSIIRPTY 518

Query: 614 KLSYEHA 620
            L+YE A
Sbjct: 519 MLTYESA 525