Miyakogusa Predicted Gene
- Lj0g3v0327759.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0327759.1 Non Chatacterized Hit- tr|K3YT65|K3YT65_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si017463,25.81,8e-19,TARGET OF MYB1 RELATED (TOM1 - RELATED),
PLANT,NULL; VHS DOMAIN CONTAINING PROTEIN FAMILY,NULL;
ENTH,gene.g25583.t1.1
(304 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06210.1 | Symbols: | ENTH/VHS/GAT family protein | chr1:189... 161 5e-40
AT1G06210.2 | Symbols: | ENTH/VHS/GAT family protein | chr1:189... 115 5e-26
AT5G16880.2 | Symbols: | Target of Myb protein 1 | chr5:5549658... 103 1e-22
AT5G16880.1 | Symbols: | Target of Myb protein 1 | chr5:5549658... 103 1e-22
AT5G16880.3 | Symbols: | Target of Myb protein 1 | chr5:5549658... 89 3e-18
AT4G32760.2 | Symbols: | ENTH/VHS/GAT family protein | chr4:157... 54 1e-07
AT4G32760.1 | Symbols: | ENTH/VHS/GAT family protein | chr4:157... 54 1e-07
>AT1G06210.1 | Symbols: | ENTH/VHS/GAT family protein |
chr1:1897567-1898986 FORWARD LENGTH=383
Length = 383
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 148/259 (57%), Gaps = 20/259 (7%)
Query: 2 INTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTWF 61
IN + NGTE++ A+KRKI+ +SP+ Q L+L++LE A+ C VFS+V SE VL++M W
Sbjct: 65 INNDEFNGTEIVRAIKRKISGKSPVSQRLSLELLEACAMNCEKVFSEVASEKVLDEMVWL 124
Query: 62 IYNPHADKHNQKKALQLIESWANLGYPDYLGLLRESQSSMVIDQKKESYMSLIGRDEQAV 121
I N AD N+K+A QLI +W YL + ++YMSL G +
Sbjct: 125 IKNGEADSENRKRAFQLIRAWGQSQDLTYLPVFH------------QTYMSLEGENGLHA 172
Query: 122 TAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIP--EEAELEDSTAAYSPPKYLPMSNE 179
S P L+S + R P+ PP +P E+A +D Y+ + +S +
Sbjct: 173 RGEENSMPGQSSLESLMQRPV---PVPPPGSYPVPNQEQALGDDDGLDYN---FGNLSIK 226
Query: 180 EKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRILERTTNDEV 239
+KK + ++ EL SS++ +EG+P ++DLT+SL++ CK S ++ I+E TT+DE
Sbjct: 227 DKKEQIEITRNSLELLSSMLNTEGKPNHTEDDLTVSLMEKCKQSQPLIQMIIESTTDDEG 286
Query: 240 TNIEALYLNDELEQLVSQF 258
EAL+LNDEL+Q++S +
Sbjct: 287 VLFEALHLNDELQQVLSSY 305
>AT1G06210.2 | Symbols: | ENTH/VHS/GAT family protein |
chr1:1897567-1898494 FORWARD LENGTH=279
Length = 279
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 20/216 (9%)
Query: 2 INTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTWF 61
IN + NGTE++ A+KRKI+ +SP+ Q L+L++LE A+ C VFS+V SE VL++M W
Sbjct: 65 INNDEFNGTEIVRAIKRKISGKSPVSQRLSLELLEACAMNCEKVFSEVASEKVLDEMVWL 124
Query: 62 IYNPHADKHNQKKALQLIESWANLGYPDYLGLLRESQSSMVIDQKKESYMSLIGRDEQAV 121
I N AD N+K+A QLI +W +SQ + ++YMSL G +
Sbjct: 125 IKNGEADSENRKRAFQLIRAWG------------QSQDLTYLPVFHQTYMSLEGENGLHA 172
Query: 122 TAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIP--EEAELEDSTAAYSPPKYLPMSNE 179
S P L+S + R P+ PP +P E+A +D Y+ + +S +
Sbjct: 173 RGEENSMPGQSSLESLMQRPV---PVPPPGSYPVPNQEQALGDDDGLDYN---FGNLSIK 226
Query: 180 EKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLS 215
+KK + ++ EL SS++ +EG+P + TLS
Sbjct: 227 DKKEQIEITRNSLELLSSMLNTEGKPNHTEVVATLS 262
>AT5G16880.2 | Symbols: | Target of Myb protein 1 |
chr5:5549658-5551274 FORWARD LENGTH=407
Length = 407
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 135/266 (50%), Gaps = 31/266 (11%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
MIN +N E++ +K++I + P +Q LAL +LET C FS+V +E VL++M
Sbjct: 74 MINQETINSVELIRGIKKRIMMKQPRIQYLALVLLETCVKNCEKAFSEVAAERVLDEMVK 133
Query: 61 FIYNPHADKHNQKKALQLIESWA-NLGYPDYLGLLRESQSSMVIDQKKESYMSLIGRDEQ 119
I +P +N+ KAL LIE+W + YL + E+ S+ K + GRD +
Sbjct: 134 LIDDPQTVVNNRNKALMLIEAWGESTSELRYLPVFEETYKSL-----KARGIRFPGRDNE 188
Query: 120 AV----TAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPEEAELEDSTAAYSPPKYLP 175
++ T AR S PA L++ L ++ H E A ++ S
Sbjct: 189 SLAPIFTPAR-STPAP-ELNADLPQHVH-------------EPAHIQYDVPVRS------ 227
Query: 176 MSNEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRILERTT 235
+ E+ K A++ EL S+++ S + L++DLT +L+ C+ S ++RI+E
Sbjct: 228 FTAEQTKEAFDIARNSIELLSTVLSSSPQHDALQDDLTTTLVQQCRQSQTTVQRIIETAG 287
Query: 236 NDEVTNIEALYLNDELEQLVSQFDDL 261
+E EAL +NDEL + +S+++++
Sbjct: 288 ENEALLFEALNVNDELVKTLSKYEEM 313
>AT5G16880.1 | Symbols: | Target of Myb protein 1 |
chr5:5549658-5551274 FORWARD LENGTH=407
Length = 407
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 135/266 (50%), Gaps = 31/266 (11%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
MIN +N E++ +K++I + P +Q LAL +LET C FS+V +E VL++M
Sbjct: 74 MINQETINSVELIRGIKKRIMMKQPRIQYLALVLLETCVKNCEKAFSEVAAERVLDEMVK 133
Query: 61 FIYNPHADKHNQKKALQLIESWA-NLGYPDYLGLLRESQSSMVIDQKKESYMSLIGRDEQ 119
I +P +N+ KAL LIE+W + YL + E+ S+ K + GRD +
Sbjct: 134 LIDDPQTVVNNRNKALMLIEAWGESTSELRYLPVFEETYKSL-----KARGIRFPGRDNE 188
Query: 120 AV----TAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPEEAELEDSTAAYSPPKYLP 175
++ T AR S PA L++ L ++ H E A ++ S
Sbjct: 189 SLAPIFTPAR-STPAP-ELNADLPQHVH-------------EPAHIQYDVPVRS------ 227
Query: 176 MSNEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRILERTT 235
+ E+ K A++ EL S+++ S + L++DLT +L+ C+ S ++RI+E
Sbjct: 228 FTAEQTKEAFDIARNSIELLSTVLSSSPQHDALQDDLTTTLVQQCRQSQTTVQRIIETAG 287
Query: 236 NDEVTNIEALYLNDELEQLVSQFDDL 261
+E EAL +NDEL + +S+++++
Sbjct: 288 ENEALLFEALNVNDELVKTLSKYEEM 313
>AT5G16880.3 | Symbols: | Target of Myb protein 1 |
chr5:5549658-5551021 FORWARD LENGTH=297
Length = 297
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 120/245 (48%), Gaps = 33/245 (13%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYCNMVFSKVVSEMVLEDMTW 60
MIN +N E++ +K++I + P +Q LAL +LET C FS+V +E VL++M
Sbjct: 74 MINQETINSVELIRGIKKRIMMKQPRIQYLALVLLETCVKNCEKAFSEVAAERVLDEMVK 133
Query: 61 FIYNPHADKHNQKKALQLIESWA-NLGYPDYLGLLRESQSSMVIDQKKESYMSLIGRDEQ 119
I +P +N+ KAL LIE+W + YL + E+ S+ K + GRD +
Sbjct: 134 LIDDPQTVVNNRNKALMLIEAWGESTSELRYLPVFEETYKSL-----KARGIRFPGRDNE 188
Query: 120 AV----TAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPEEAELEDSTAAYSPPKYLP 175
++ T AR S PA L++ L ++ H E + Y P
Sbjct: 189 SLAPIFTPAR-STPAP-ELNADLPQHVH------------------EPAHIQYDVP-VRS 227
Query: 176 MSNEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRILERTT 235
+ E+ K A++ EL S+++ S + L++DLT +L+ C+ S ++RI+E T
Sbjct: 228 FTAEQTKEAFDIARNSIELLSTVLSSSPQHDALQDDLTTTLVQQCRQSQTTVQRIIE--T 285
Query: 236 NDEVT 240
DE T
Sbjct: 286 ADEQT 290
>AT4G32760.2 | Symbols: | ENTH/VHS/GAT family protein |
chr4:15799376-15803832 FORWARD LENGTH=676
Length = 676
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 44/272 (16%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYC-NMVFSKVVSEMVLEDMT 59
M+N+ +V+ +K++I +P Q LAL +LET C +MV V + V+ +M
Sbjct: 28 MLNSDPAQAKDVVKGIKKRIGSRNPKAQLLALTLLETIVKNCGDMVHMHVAEKGVIHEMV 87
Query: 60 WFIYNPHADKHNQKKALQLIESW------ANLGYPDYLGLLRE-SQSSMVIDQKKESYMS 112
+ D H ++K L LI++W YP Y +E ++ V Q+ E
Sbjct: 88 RIVKK-KPDFHVKEKILVLIDTWQEAFGGPRARYPQYYAGYQELLRAGAVFPQRSER--- 143
Query: 113 LIGRDEQAVTAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPE-EAELEDSTAAYSPP 171
+A + P L S + P GN +PE AE E T + S
Sbjct: 144 ---------SAPVFTPPQTQPLTSYPPNLRNAGP-----GNDVPEPSAEPEFPTLSLS-- 187
Query: 172 KYLPMSNEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRI- 230
+ N + + ++A E+ S++ G LK+++ + L++ C+ +R+
Sbjct: 188 ---EIQNAKGIMDVLA-----EMLSAL--EPGNKEDLKQEVMVDLVEQCR---TYKQRVV 234
Query: 231 -LERTTNDEVTNIEALYLNDELEQLVSQFDDL 261
L +T+DE + L LND+L+++++ ++ +
Sbjct: 235 HLVNSTSDESLLCQGLALNDDLQRVLTNYEAI 266
>AT4G32760.1 | Symbols: | ENTH/VHS/GAT family protein |
chr4:15799376-15803832 FORWARD LENGTH=675
Length = 675
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 44/272 (16%)
Query: 1 MINTGQLNGTEVMLAVKRKINHESPIVQGLALDMLETFAVYC-NMVFSKVVSEMVLEDMT 59
M+N+ +V+ +K++I +P Q LAL +LET C +MV V + V+ +M
Sbjct: 28 MLNSDPAQAKDVVKGIKKRIGSRNPKAQLLALTLLETIVKNCGDMVHMHVAEKGVIHEMV 87
Query: 60 WFIYNPHADKHNQKKALQLIESW------ANLGYPDYLGLLRE-SQSSMVIDQKKESYMS 112
+ D H ++K L LI++W YP Y +E ++ V Q+ E
Sbjct: 88 RIVKK-KPDFHVKEKILVLIDTWQEAFGGPRARYPQYYAGYQELLRAGAVFPQRSER--- 143
Query: 113 LIGRDEQAVTAARKSAPAALYLDSTLSRYTHKDPLDPPEGNTIPE-EAELEDSTAAYSPP 171
+A + P L S + P GN +PE AE E T + S
Sbjct: 144 ---------SAPVFTPPQTQPLTSYPPNLRNAGP-----GNDVPEPSAEPEFPTLSLS-- 187
Query: 172 KYLPMSNEEKKVHLVAAQDRFELFSSIVYSEGEPTPLKEDLTLSLLDDCKLSLAAMKRI- 230
+ N + + ++A E+ S++ G LK+++ + L++ C+ +R+
Sbjct: 188 ---EIQNAKGIMDVLA-----EMLSAL--EPGNKEDLKQEVMVDLVEQCR---TYKQRVV 234
Query: 231 -LERTTNDEVTNIEALYLNDELEQLVSQFDDL 261
L +T+DE + L LND+L+++++ ++ +
Sbjct: 235 HLVNSTSDESLLCQGLALNDDLQRVLTNYEAI 266