Miyakogusa Predicted Gene
- Lj0g3v0327699.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0327699.1 Non Chatacterized Hit- tr|I1KW41|I1KW41_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6581
PE=,43.7,1e-18,FAMILY NOT NAMED,NULL; zf-C3HC4_3,NULL; no
description,Zinc finger, RING/FYVE/PHD-type; ZF_RING_2,Zi,CUFF.22303.1
(158 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79380.1 | Symbols: | Ca(2)-dependent phospholipid-binding p... 74 5e-14
AT5G63970.2 | Symbols: | Copine (Calcium-dependent phospholipid... 69 1e-12
AT5G63970.1 | Symbols: | Copine (Calcium-dependent phospholipid... 69 1e-12
AT5G14420.2 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835... 58 3e-09
AT5G14420.4 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835... 58 3e-09
AT5G14420.3 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835... 58 3e-09
AT5G14420.1 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835... 58 3e-09
AT3G01650.1 | Symbols: RGLG1 | RING domain ligase1 | chr3:242734... 56 1e-08
AT1G67800.2 | Symbols: | Copine (Calcium-dependent phospholipid... 55 2e-08
AT1G67800.4 | Symbols: | Copine (Calcium-dependent phospholipid... 55 2e-08
AT1G67800.3 | Symbols: | Copine (Calcium-dependent phospholipid... 55 2e-08
AT1G67800.1 | Symbols: | Copine (Calcium-dependent phospholipid... 55 2e-08
>AT1G79380.1 | Symbols: | Ca(2)-dependent phospholipid-binding
protein (Copine) family | chr1:29860812-29863023 FORWARD
LENGTH=401
Length = 401
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 38/51 (74%)
Query: 107 PANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLFT 157
P C ICLTN KD+AF CGHM+C DCGS++SNC ICR RIT R+ L+T
Sbjct: 351 PEQTQSCPICLTNRKDVAFSCGHMTCGDCGSKISNCPICRVRITNRLKLYT 401
>AT5G63970.2 | Symbols: | Copine (Calcium-dependent
phospholipid-binding protein) family |
chr5:25607006-25608916 REVERSE LENGTH=367
Length = 367
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 92 SNPNQLDKNTLPED--DPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRI 149
S PNQ+ + D P+ VC ICLTN KD+AF CGH +C++CG ++ C +CRQ I
Sbjct: 300 SVPNQMTETAEKSDRLAPSTVPVCPICLTNPKDMAFSCGHTTCKECGVVITTCPLCRQPI 359
Query: 150 TARVMLFT 157
T R+ L+T
Sbjct: 360 TTRIRLYT 367
>AT5G63970.1 | Symbols: | Copine (Calcium-dependent
phospholipid-binding protein) family |
chr5:25607006-25608916 REVERSE LENGTH=367
Length = 367
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 92 SNPNQLDKNTLPED--DPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRI 149
S PNQ+ + D P+ VC ICLTN KD+AF CGH +C++CG ++ C +CRQ I
Sbjct: 300 SVPNQMTETAEKSDRLAPSTVPVCPICLTNPKDMAFSCGHTTCKECGVVITTCPLCRQPI 359
Query: 150 TARVMLFT 157
T R+ L+T
Sbjct: 360 TTRIRLYT 367
>AT5G14420.2 | Symbols: RGLG2 | RING domain ligase2 |
chr5:4648355-4650563 REVERSE LENGTH=468
Length = 468
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 109 NQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ +C ICL+N KD+AFGCGH +C +CG L C ICR I R+ L+
Sbjct: 421 DNQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
>AT5G14420.4 | Symbols: RGLG2 | RING domain ligase2 |
chr5:4648355-4650563 REVERSE LENGTH=468
Length = 468
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 109 NQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ +C ICL+N KD+AFGCGH +C +CG L C ICR I R+ L+
Sbjct: 421 DNQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
>AT5G14420.3 | Symbols: RGLG2 | RING domain ligase2 |
chr5:4648355-4650563 REVERSE LENGTH=468
Length = 468
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 109 NQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ +C ICL+N KD+AFGCGH +C +CG L C ICR I R+ L+
Sbjct: 421 DNQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
>AT5G14420.1 | Symbols: RGLG2 | RING domain ligase2 |
chr5:4648355-4650563 REVERSE LENGTH=468
Length = 468
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 109 NQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ +C ICL+N KD+AFGCGH +C +CG L C ICR I R+ L+
Sbjct: 421 DNQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
>AT3G01650.1 | Symbols: RGLG1 | RING domain ligase1 |
chr3:242734-245062 FORWARD LENGTH=489
Length = 489
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 112 VCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+C ICL+N K++AFGCGH +C +CG L C ICR I R+ L+
Sbjct: 445 LCPICLSNPKNMAFGCGHQTCCECGPDLKVCPICRAPIQTRIKLY 489
>AT1G67800.2 | Symbols: | Copine (Calcium-dependent
phospholipid-binding protein) family |
chr1:25421029-25423297 REVERSE LENGTH=453
Length = 453
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 106 DPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ + Q C +CL + K++AF CGH +C CG L C ICR I+ R+ L+
Sbjct: 403 NESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDLHVCPICRSSISVRIKLY 453
>AT1G67800.4 | Symbols: | Copine (Calcium-dependent
phospholipid-binding protein) family |
chr1:25421029-25423237 REVERSE LENGTH=433
Length = 433
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 106 DPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ + Q C +CL + K++AF CGH +C CG L C ICR I+ R+ L+
Sbjct: 383 NESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDLHVCPICRSSISVRIKLY 433
>AT1G67800.3 | Symbols: | Copine (Calcium-dependent
phospholipid-binding protein) family |
chr1:25421029-25423237 REVERSE LENGTH=433
Length = 433
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 106 DPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ + Q C +CL + K++AF CGH +C CG L C ICR I+ R+ L+
Sbjct: 383 NESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDLHVCPICRSSISVRIKLY 433
>AT1G67800.1 | Symbols: | Copine (Calcium-dependent
phospholipid-binding protein) family |
chr1:25421029-25423237 REVERSE LENGTH=433
Length = 433
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 106 DPANQMVCTICLTNGKDLAFGCGHMSCRDCGSRLSNCHICRQRITARVMLF 156
+ + Q C +CL + K++AF CGH +C CG L C ICR I+ R+ L+
Sbjct: 383 NESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDLHVCPICRSSISVRIKLY 433