Miyakogusa Predicted Gene
- Lj0g3v0326929.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0326929.1 Non Chatacterized Hit- tr|G7LCW1|G7LCW1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,65.49,0,seg,NULL; UBIQUITIN_CONJUGAT_2,Ubiquitin-conjugating
enzyme, E2; no description,Ubiquitin-conjugatin,CUFF.22238.1
(699 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G53025.1 | Symbols: | Ubiquitin-conjugating enzyme family pr... 374 e-103
AT3G15355.1 | Symbols: UBC25, PFU1 | ubiquitin-conjugating enzym... 369 e-102
AT1G53023.1 | Symbols: | Ubiquitin-conjugating enzyme family pr... 319 3e-87
AT2G16920.1 | Symbols: UBC23, PFU2 | ubiquitin-conjugating enzym... 309 5e-84
AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | phosphate 2 | chr2... 295 1e-79
AT3G12775.1 | Symbols: | ubiquitin-conjugating enzyme family pr... 65 2e-10
AT1G14400.2 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein ... 64 5e-10
AT1G14400.1 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein ... 64 5e-10
AT2G02760.1 | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enz... 63 6e-10
AT4G27960.1 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 | c... 63 7e-10
AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 63 8e-10
AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 63 8e-10
AT5G41700.4 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 63 9e-10
AT5G53300.4 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 62 1e-09
AT5G53300.2 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 62 1e-09
AT5G53300.1 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 62 1e-09
AT5G41700.5 | Symbols: UBC8 | ubiquitin conjugating enzyme 8 | c... 62 1e-09
AT5G41700.1 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 62 1e-09
AT5G41700.2 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 62 1e-09
AT3G08690.2 | Symbols: UBC11 | ubiquitin-conjugating enzyme 11 |... 61 3e-09
AT3G08690.1 | Symbols: UBC11, ATUBC11 | ubiquitin-conjugating en... 61 3e-09
AT4G27960.2 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 | c... 60 5e-09
AT5G62540.1 | Symbols: UBC3 | ubiquitin-conjugating enzyme 3 | c... 59 9e-09
AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-con... 59 1e-08
AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 59 1e-08
AT5G50870.1 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |... 59 2e-08
AT5G50870.2 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |... 58 2e-08
AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-con... 58 3e-08
AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | sum... 57 3e-08
AT2G16740.1 | Symbols: UBC29 | ubiquitin-conjugating enzyme 29 |... 57 4e-08
AT5G56150.2 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |... 57 4e-08
AT5G56150.1 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |... 57 4e-08
AT1G64230.5 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 55 1e-07
AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 55 1e-07
AT1G78870.2 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enz... 55 2e-07
AT3G08700.1 | Symbols: UBC12 | ubiquitin-conjugating enzyme 12 |... 55 2e-07
AT5G05080.2 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating en... 54 4e-07
AT5G05080.1 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating en... 54 4e-07
AT1G16890.3 | Symbols: UBC36 | ubiquitin-conjugating enzyme 36 |... 54 5e-07
AT5G41700.3 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 53 6e-07
AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 53 6e-07
AT5G59300.1 | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein ... 53 7e-07
AT3G46460.1 | Symbols: UBC13 | ubiquitin-conjugating enzyme 13 |... 53 8e-07
AT5G53300.3 | Symbols: | ubiquitin-conjugating enzyme 10 | chr5... 52 1e-06
AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 52 1e-06
AT1G17280.2 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |... 50 6e-06
AT1G17280.1 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |... 50 6e-06
>AT1G53025.1 | Symbols: | Ubiquitin-conjugating enzyme family
protein | chr1:19757072-19759474 REVERSE LENGTH=543
Length = 543
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 169/281 (60%), Positives = 219/281 (77%), Gaps = 3/281 (1%)
Query: 395 RDEILRKFQNFKQFDTVEDTSDHHFLPTNSSMKQYPKDWAKRIQEEWKLLEKNLPDTIFV 454
++E LR +FK+FDTVED SDHH+ S KQ+ K+W K++Q +WK+LE +LP+ I V
Sbjct: 237 KEEFLR---DFKRFDTVEDFSDHHYASKGKSSKQHSKNWVKKVQADWKILENDLPEAISV 293
Query: 455 RVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVYYHSGGLRLNPNLYNC 514
R ESR+DLLRAVIIGAEGTPYHDGLFFFD+ FP YP+VPP V+YHSGGLR+NPNLYNC
Sbjct: 294 RACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNC 353
Query: 515 GKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILNTKPYFNEPGYAHMSGSADGEL 574
GKVCLSLL TW+GS EKWLP ST+LQ+LVSIQ LILN KPYFNEPGY +G+A GE
Sbjct: 354 GKVCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKPYFNEPGYVQSAGTASGES 413
Query: 575 RSPRDNEETFMLSLKTMMYMIRRPPKNFEDFVVGHFCSRAHDILVACKAYMDGAQVGCLV 634
+S +E F+LSLKTM+Y IRRPP++FE++V H+ R+HDI+ AC AY GA +G +V
Sbjct: 414 KSKVYSENVFLLSLKTMVYSIRRPPQHFEEYVQNHYFVRSHDIVKACNAYKAGAPLGSMV 473
Query: 635 KGGVQDVDQGDKSCSKQFQYCLSALVNMLVKEFTQIGVKDC 675
KGGVQD+++ +S SK+F+ +++ + +V EF ++GVK+
Sbjct: 474 KGGVQDLEEARQSGSKKFKTDVASFMQTVVDEFVKLGVKEL 514
>AT3G15355.1 | Symbols: UBC25, PFU1 | ubiquitin-conjugating enzyme
25 | chr3:5183858-5186669 FORWARD LENGTH=609
Length = 609
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 173/269 (64%), Positives = 208/269 (77%), Gaps = 1/269 (0%)
Query: 405 FKQFDTVEDTSDHHFLPTNSSMKQYPKDWAKRIQEEWKLLEKNLPDTIFVRVYESRIDLL 464
FK+FD VED SDHH+ ++ KQ+ KDWAKRIQ+EW++LEK+LP+ IFVR YESR+DLL
Sbjct: 305 FKRFDIVEDFSDHHYASKGTTSKQHSKDWAKRIQDEWRILEKDLPEMIFVRAYESRMDLL 364
Query: 465 RAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNT 524
RAVIIGA+GTPYHDGLFFFD+FFP YP+ PP V+YHSGGLR+NPNLYNCGKVCLSLL T
Sbjct: 365 RAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGT 424
Query: 525 WSGSKNEKWLPGVSTILQVLVSIQGLILNTKPYFNEPGYAHMSGSADGELRSPRDNEETF 584
WSG++ EKW+P ST+LQVLVSIQGLILN KPYFNEPGY +GSA GE S +E TF
Sbjct: 425 WSGNQREKWIPNTSTMLQVLVSIQGLILNQKPYFNEPGYERSAGSAHGESTSKAYSENTF 484
Query: 585 MLSLKTMMYMIRRPPKNFEDFVVGHFCSRAHDILVACKAYMDGAQVGCLVKGGVQDVDQG 644
+LSLKTM+Y +RRPPK FEDF GHF S AHD+L AC AY +GA G LVKG +
Sbjct: 485 ILSLKTMVYTMRRPPKYFEDFAYGHFFSCAHDVLKACNAYRNGATPGYLVKGAPDVEENS 544
Query: 645 DKSCSKQFQYCLSALV-NMLVKEFTQIGV 672
S +F+ ++ V +L+KEF +GV
Sbjct: 545 AGMSSLKFRTDVATFVETVLLKEFILLGV 573
>AT1G53023.1 | Symbols: | Ubiquitin-conjugating enzyme family
protein | chr1:19754214-19755843 REVERSE LENGTH=316
Length = 316
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/288 (56%), Positives = 202/288 (70%), Gaps = 23/288 (7%)
Query: 393 EARDEILRKFQNFKQFDTVEDTSDHHFLPTNS---------SMKQYPKDWAKRIQEEWKL 443
+ ++E LR +FK+FDTVED SDHH+ S K PK+W K IQ+EWK+
Sbjct: 12 KLKEEFLR---DFKRFDTVEDFSDHHYAAEGSPAKLSLWHLKFKGRPKNWVKDIQKEWKI 68
Query: 444 LEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVYYHSG 503
L+KNLP+TIFVR ESRIDLLRAVIIGAEGTPYHDGLFFFD+ FP YP+VPP+V+YHSG
Sbjct: 69 LDKNLPETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSG 128
Query: 504 GLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILNTKPYFNEPGY 563
GLR+NPNLY CGKVCLSL++TW+G K EKWLP ST+LQ+LVSIQ LILN KPY+NEPGY
Sbjct: 129 GLRINPNLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNEKPYYNEPGY 188
Query: 564 AHMSGSADGELRSPRDNEETFMLSLKTMMYMIRRPPKNFEDFVVGHFCSRAHDILVACKA 623
G+ GE S +E F+ SLKTM +FE+FV HF R+HDI+ AC A
Sbjct: 189 EKSMGTPLGESYSKDYSENVFVFSLKTM---------HFEEFVRSHFFVRSHDIVKACNA 239
Query: 624 YMDGAQVGCLVKGGVQDVDQGDKSCSKQFQYCLSALVNMLVKEFTQIG 671
Y DGA VG + KGGV+ Q + S +F+ +++ + +V EF +G
Sbjct: 240 YKDGAPVGSIDKGGVK--KQTRQRGSLKFRINVTSFMKTVVDEFVNLG 285
>AT2G16920.1 | Symbols: UBC23, PFU2 | ubiquitin-conjugating enzyme 23
| chr2:7334559-7338827 REVERSE LENGTH=1102
Length = 1102
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 149/276 (53%), Positives = 188/276 (68%), Gaps = 3/276 (1%)
Query: 404 NFKQFDTVEDTSDHHFLPTNSSMKQYPKDWAKRIQEEWKLLEKNLPDTIFVRVYESRIDL 463
+F++FD +D DHHFL + K + W K++ ++WK+L+ NLPD IFVR YE R+DL
Sbjct: 823 SFRRFDISQDPLDHHFLGVDG-QKTKERQWFKKVDQDWKILQNNLPDGIFVRAYEDRMDL 881
Query: 464 LRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLN 523
LRAVI+GA GTPY DGLFFFD PS YP+VPP YYHSGG RLNPNLY GKVCLSLLN
Sbjct: 882 LRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLN 941
Query: 524 TWSGSKNEKWLPGVSTILQVLVSIQGLILNTKPYFNEPGYAHMSGSADGELRSPRDNEET 583
TW+G NE W P S+ILQVLVS+QGL+LN+KPYFNE GY G+A+GE S NE T
Sbjct: 942 TWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQVGTAEGEKNSLGYNENT 1001
Query: 584 FMLSLKTMMYMIRRPPKNFEDFVVGHFCSRAHDILVACKAYMDGAQVGCLVK-GGVQDVD 642
F+L+ KTMMY++R+PPK+FE+ + HF R + IL AC AYM G +G L K V D
Sbjct: 1002 FLLNCKTMMYLMRKPPKDFEELIKDHFRKRGYYILKACDAYMKGYLIGSLTKDASVIDER 1061
Query: 643 QGDKSCSKQFQYCLSALVNMLVKEFTQIGVKDCLKF 678
S S F+ L+ + L +++G DC +F
Sbjct: 1062 SSANSTSVGFKLMLAKIAPKLFSALSEVGA-DCNEF 1096
>AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | phosphate 2 |
chr2:14277785-14281482 REVERSE LENGTH=907
Length = 907
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/302 (50%), Positives = 202/302 (66%), Gaps = 16/302 (5%)
Query: 378 GNNGTSDSTVVAISDEARDEILRKFQNFKQFDTVEDTSDHHFLPTNSSM--KQYPKDWAK 435
G N T DST++ + +R+++ F+QFD V D SDHHFL ++ + Q K W K
Sbjct: 614 GINKTLDSTLL---ENSRNQV-----RFRQFDMVNDCSDHHFLSSDKGLAQSQVTKSWVK 665
Query: 436 RIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVP 495
++Q+EW LE NLP+TI+VRV E R+DLLRA ++GA GTPYHDGLFFFD+ P YP+ P
Sbjct: 666 KVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPHEP 725
Query: 496 PQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILNTK 555
P V+YHSGG+RLNPNLY G+VCLSLLNTWSGS E W G S+ILQ+L+S Q L+LN K
Sbjct: 726 PMVHYHSGGMRLNPNLYESGRVCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQALVLNEK 785
Query: 556 PYFNEPGYAHMSGSADGELRSPRDNEETFMLSLKTMMYMIRRPPKNFEDFVVGHFCSRAH 615
PYFNE GY G A+GE S NE F+++ K+M+ M+R+PPK+FE V HF RA
Sbjct: 786 PYFNEAGYDKQLGRAEGEKNSVSYNENAFLITCKSMISMLRKPPKHFEMLVKDHFTHRAQ 845
Query: 616 DILVACKAYMDGAQVGCLVKGGVQDVDQGDKSCSKQFQYCLSALVNMLVKEFTQIGVKDC 675
+L ACKAYM+G V G ++ + S F+ LS L L++ F++IGV DC
Sbjct: 846 HVLAACKAYMEGVPV-----GSSANLQGNSTTNSTGFKIMLSKLYPKLLEAFSEIGV-DC 899
Query: 676 LK 677
++
Sbjct: 900 VQ 901
>AT3G12775.1 | Symbols: | ubiquitin-conjugating enzyme family
protein | chr3:4059772-4060944 FORWARD LENGTH=362
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 95/238 (39%), Gaps = 61/238 (25%)
Query: 393 EARDEILRKFQNFKQFDTVEDTS--DHHFLPTNSSMKQYPKDWAK-RIQEEWKLLEKNLP 449
E D++ ++ FK+F+ V+ + DHHF Y A + W +LE+ L
Sbjct: 81 ELGDKVDLNYKRFKKFEAVDGGAPRDHHFYNYRCCYSSYLCVCASSTVDRLWGILERGLA 140
Query: 450 D------TIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVYYHSG 503
+ FVR Y+ R +L+R + + H+ L+FFD+ FP YP P YYH
Sbjct: 141 SREKEGVSFFVRTYKERKELMRVAVTVTDCYQNHN-LYFFDLKFPKEYPYQAPSFYYHPY 199
Query: 504 GLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPG--VSTILQVLVSIQGLIL-NTKPYFNE 560
LRL S +++K L I+ V + IQ ++L NT
Sbjct: 200 DLRL------------------STPEDQKSLRDKHCYNIVDVFLHIQEIVLMNTNK---- 237
Query: 561 PGYAHMSGSADGELRSPRDNEETFMLSLKTMMYMIRRPPKNFEDFVVGHFCSRAHDIL 618
S M+ ++ RP F+DFV+G+F + IL
Sbjct: 238 --------------------------SCNQMLDILERPLAGFQDFVIGYFRKKGPLIL 269
>AT1G14400.2 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein 1 |
chr1:4927294-4928136 REVERSE LENGTH=152
Length = 152
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 435 KRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNV 494
KR+ ++K L+++ P I ++ I L AVI G + TP+ G F + F YPN
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 495 PPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILNT 554
PP V + S +PN+Y G +CL +L +W P + + +L SIQ L+ +
Sbjct: 67 PPTVRFVSR--MFHPNIYADGSICLDILQN-------QWSP-IYDVAAILTSIQSLLCDP 116
Query: 555 KP 556
P
Sbjct: 117 NP 118
>AT1G14400.1 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein 1 |
chr1:4927294-4928136 REVERSE LENGTH=152
Length = 152
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 435 KRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNV 494
KR+ ++K L+++ P I ++ I L AVI G + TP+ G F + F YPN
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 495 PPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILNT 554
PP V + S +PN+Y G +CL +L +W P + + +L SIQ L+ +
Sbjct: 67 PPTVRFVSR--MFHPNIYADGSICLDILQN-------QWSP-IYDVAAILTSIQSLLCDP 116
Query: 555 KP 556
P
Sbjct: 117 NP 118
>AT2G02760.1 | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enzyme
2 | chr2:774271-775149 FORWARD LENGTH=152
Length = 152
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 435 KRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNV 494
KR+ ++K L+++ P I ++ I L AVI G + TP+ G F + F YPN
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 495 PPQVYYHSGGLRLNPNLYNCGKVCLSLL-NTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP V + S +PN+Y G +CL +L N WS + + +L SIQ L+ +
Sbjct: 67 PPTVRFVSR--MFHPNIYADGSICLDILQNQWS---------PIYDVAAILTSIQSLLCD 115
Query: 554 TKP 556
P
Sbjct: 116 PNP 118
>AT4G27960.1 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 |
chr4:13916065-13917203 REVERSE LENGTH=148
Length = 148
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=148
Length = 148
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVAFRTK--VFHPNVNSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=148
Length = 148
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVAFRTK--VFHPNVNSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT5G41700.4 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=149
Length = 149
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 434 AKRIQEEWKLLEKNLPDT-IFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYP 492
+KRI +E K L+K+ P + IF + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 62
Query: 493 NVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLIL 552
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+
Sbjct: 63 FKPPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLT 112
Query: 553 NTKP 556
+ P
Sbjct: 113 DPNP 116
>AT5G53300.4 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT5G53300.2 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT5G53300.1 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT5G41700.5 | Symbols: UBC8 | ubiquitin conjugating enzyme 8 |
chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT5G41700.1 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT5G41700.2 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT3G08690.2 | Symbols: UBC11 | ubiquitin-conjugating enzyme 11 |
chr3:2641487-2642489 FORWARD LENGTH=148
Length = 148
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVSFKTK--VYHPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT3G08690.1 | Symbols: UBC11, ATUBC11 | ubiquitin-conjugating
enzyme 11 | chr3:2641487-2642489 FORWARD LENGTH=148
Length = 148
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVSFKTK--VYHPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT4G27960.2 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 |
chr4:13916065-13917293 REVERSE LENGTH=178
Length = 178
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 33 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 92
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + TI +VL+SI L+ +
Sbjct: 93 KPPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSPAL-TISKVLLSICSLLTD 142
Query: 554 TKP 556
P
Sbjct: 143 PNP 145
>AT5G62540.1 | Symbols: UBC3 | ubiquitin-conjugating enzyme 3 |
chr5:25104679-25105465 FORWARD LENGTH=150
Length = 150
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 435 KRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNV 494
KR+ ++K L+K+ P I ++ I A+I G E TP+ G F + F YPN
Sbjct: 7 KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNK 66
Query: 495 PPQVYYHSGGLRLNPNLYNCGKVCLSLL-NTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP V + S +PN+Y G +CL +L N WS + + VL SIQ L+ +
Sbjct: 67 PPIVRFVSR--MFHPNIYADGSICLDILQNQWS---------PIYDVAAVLTSIQSLLCD 115
Query: 554 TKP 556
P
Sbjct: 116 PNP 118
>AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 |
Ubiquitin-conjugating enzyme family protein |
chr3:4423569-4424797 REVERSE LENGTH=182
Length = 182
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
KRIQ E L + P + A IIG GTPY G+FF D+ FPS YP
Sbjct: 38 GKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPF 97
Query: 494 VPPQVYYHSGGLRLNPNLYNC-----GKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQ 548
PP++ + + +Y+C G + +++L + W P + TI +VL +I+
Sbjct: 98 KPPKLVFKT-------RIYHCNVDTAGDLSVNIL-------RDSWSPAL-TITKVLQAIR 142
Query: 549 GLILNTKPY 557
+ L +PY
Sbjct: 143 SIFLKPEPY 151
>AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=157
Length = 157
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 19/132 (14%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRV---------YESRIDLLRAVIIGAEGTPYHDGLFFFD 484
+KRI +E K L+K+ P + V + +A I+G +PY G+F
Sbjct: 3 SKRILKELKDLQKDPPTSCSAEVSGHCYGTCPVAEDMFHWQATIMGPSDSPYSGGVFLVT 62
Query: 485 VFFPSGYPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVL 544
+ FP YP PP+V + + +PN+ + G +CL +L E+W P + TI +VL
Sbjct: 63 IHFPPDYPFKPPKVAFRTK--VFHPNVNSNGSICLDIL-------KEQWSPAL-TISKVL 112
Query: 545 VSIQGLILNTKP 556
+SI L+ + P
Sbjct: 113 LSICSLLTDPNP 124
>AT5G50870.1 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |
chr5:20699626-20700998 REVERSE LENGTH=192
Length = 192
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 436 RIQEEWKLLEKNLPDTIFVRVYESRIDLLR--AVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
RIQ+E + E+N D+ +RV +L R I G GTPY G F D+ P GYP
Sbjct: 6 RIQKELQDCERN-QDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPF 64
Query: 494 VPPQVYYHSGGLRLNPNLYN-CGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLIL 552
PP++ + + +PN+ + G +CL +L ++W P + T+ LVSIQ L+
Sbjct: 65 EPPKMQFSTK--VWHPNISSQSGAICLDIL-------KDQWSPAL-TLKTALVSIQALLS 114
Query: 553 NTKP 556
+P
Sbjct: 115 APEP 118
>AT5G50870.2 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |
chr5:20699626-20700998 REVERSE LENGTH=203
Length = 203
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 436 RIQEEWKLLEKNLPDTIFVRVYESRIDLLR--AVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
RIQ+E + E+N D+ +RV +L R I G GTPY G F D+ P GYP
Sbjct: 6 RIQKELQDCERN-QDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPF 64
Query: 494 VPPQVYYHSGGLRLNPNLYN-CGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLIL 552
PP++ + + +PN+ + G +CL +L ++W P + T+ LVSIQ L+
Sbjct: 65 EPPKMQFSTK--VWHPNISSQSGAICLDIL-------KDQWSPAL-TLKTALVSIQALLS 114
Query: 553 NTKP 556
+P
Sbjct: 115 APEP 118
>AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 |
Ubiquitin-conjugating enzyme family protein |
chr3:4423828-4424797 REVERSE LENGTH=170
Length = 170
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 435 KRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNV 494
KRIQ E L + P + A IIG GTPY G+FF D+ FPS YP
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 495 PPQVYYHSGGLRLNPNLYNC-----GKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQG 549
PP++ + + +Y+C G + +++L + W P + TI +VL +I+
Sbjct: 99 PPKLVFKT-------RIYHCNVDTAGDLSVNIL-------RDSWSPAL-TITKVLQAIRS 143
Query: 550 LILNTKP 556
+ L +P
Sbjct: 144 IFLKPEP 150
>AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | sumo
conjugation enzyme 1 | chr3:21428831-21430110 REVERSE
LENGTH=160
Length = 160
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 436 RIQEEWKLLEKNLPDTIFVRVYESRID------LLRAVIIGAEGTPYHDGLFFFDVFFPS 489
R+ EE K KN P FV E+ D + I G GT + G F + F
Sbjct: 9 RLAEERKSWRKNHPHG-FVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSE 67
Query: 490 GYPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQG 549
YP+ PP+ + G +PN+Y G VCLS+LN ++ W P + T+ Q+LV IQ
Sbjct: 68 DYPSKPPKCKFPQG--FFHPNVYPSGTVCLSILN-----EDYGWRPAI-TVKQILVGIQD 119
Query: 550 LILNTKP 556
L+ P
Sbjct: 120 LLDTPNP 126
>AT2G16740.1 | Symbols: UBC29 | ubiquitin-conjugating enzyme 29 |
chr2:7267880-7268737 FORWARD LENGTH=148
Length = 148
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+RI +E K L+++ P + + +A I+G +PY G+F ++ FP YP
Sbjct: 3 TRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L ++W P + TI +VL+SI L+ +
Sbjct: 63 KPPKVVFRTK--VFHPNINSNGNICLDIL-------KDQWSPAL-TISKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT5G56150.2 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |
chr5:22729756-22730964 FORWARD LENGTH=148
Length = 148
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E + L+++ P + + +A I+G +P+ G+F + FP YP
Sbjct: 3 SKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + T+ +VL+SI L+ +
Sbjct: 63 KPPKVAFRTK--VYHPNINSNGSICLDIL-------KEQWSPAL-TVSKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT5G56150.1 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |
chr5:22729756-22730964 FORWARD LENGTH=148
Length = 148
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E + L+++ P + + +A I+G +P+ G+F + FP YP
Sbjct: 3 SKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILN 553
PP+V + + +PN+ + G +CL +L E+W P + T+ +VL+SI L+ +
Sbjct: 63 KPPKVAFRTK--VYHPNINSNGSICLDIL-------KEQWSPAL-TVSKVLLSICSLLTD 112
Query: 554 TKP 556
P
Sbjct: 113 PNP 115
>AT1G64230.5 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=190
Length = 190
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 465 RAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNT 524
+A I+G +PY G+F + FP YP PP+V + + +PN+ + G +CL +L
Sbjct: 76 QATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKV--FHPNVNSNGSICLDIL-- 131
Query: 525 WSGSKNEKWLPGVSTILQVLVSIQGLILNTKP 556
E+W P + TI +VL+SI L+ + P
Sbjct: 132 -----KEQWSPAL-TISKVLLSICSLLTDPNP 157
>AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=190
Length = 190
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 465 RAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNT 524
+A I+G +PY G+F + FP YP PP+V + + +PN+ + G +CL +L
Sbjct: 76 QATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKV--FHPNVNSNGSICLDIL-- 131
Query: 525 WSGSKNEKWLPGVSTILQVLVSIQGLILNTKP 556
E+W P + TI +VL+SI L+ + P
Sbjct: 132 -----KEQWSPAL-TISKVLLSICSLLTDPNP 157
>AT1G78870.2 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enzyme
35 | chr1:29650589-29652203 FORWARD LENGTH=153
Length = 153
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 437 IQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPP 496
I+E +LL + P I E + +I+G +PY G+F ++F P YP P
Sbjct: 11 IKETQRLLSEPAPG-ISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAP 69
Query: 497 QVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLI 551
+V + + +PN+ G++CL +L +KW P + I VL+SIQ L+
Sbjct: 70 KVRFLTKI--YHPNIDKLGRICLDIL-------KDKWSPALQ-IRTVLLSIQALL 114
>AT3G08700.1 | Symbols: UBC12 | ubiquitin-conjugating enzyme 12 |
chr3:2643482-2644545 FORWARD LENGTH=149
Length = 149
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 434 AKRIQEEWKLLEKNLPDTIFV-RVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYP 492
+KRI E + ++++ P V E I +A I+G +PY G+F + F S YP
Sbjct: 3 SKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYP 62
Query: 493 NVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLIL 552
PP+V + + +PN+ + G +CL +L E+W P +T +VL+SI L+
Sbjct: 63 FKPPKVNFKTK--VYHPNIDSKGSICLDIL-------KEQWSPAPTT-SKVLLSICSLLT 112
Query: 553 NTKPYFNEP 561
+ P N+P
Sbjct: 113 DPNP--NDP 119
>AT5G05080.2 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating
enzyme 22 | chr5:1498727-1499972 REVERSE LENGTH=251
Length = 251
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 424 SSMKQYPKDWAKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFF 483
+S + P + K++ +E K L+++ PD I V V + + A I G GTPY +GLF
Sbjct: 2 ASNENLPPNVIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRM 61
Query: 484 DVFFPSGYPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQV 543
+ +P+ PP+ Y+ + +PN+ + G++C++ L + W P + + V
Sbjct: 62 KLALSHDFPHSPPKGYFMTK--IFHPNVASNGEICVNTL-------KKDWNPSLG-LRHV 111
Query: 544 LVSIQGLILNTKP 556
L ++ L++ P
Sbjct: 112 LSVVRCLLIEPFP 124
>AT5G05080.1 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating
enzyme 22 | chr5:1498727-1499972 REVERSE LENGTH=251
Length = 251
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 424 SSMKQYPKDWAKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFF 483
+S + P + K++ +E K L+++ PD I V V + + A I G GTPY +GLF
Sbjct: 2 ASNENLPPNVIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRM 61
Query: 484 DVFFPSGYPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQV 543
+ +P+ PP+ Y+ + +PN+ + G++C++ L + W P + + V
Sbjct: 62 KLALSHDFPHSPPKGYFMTK--IFHPNVASNGEICVNTL-------KKDWNPSLG-LRHV 111
Query: 544 LVSIQGLILNTKP 556
L ++ L++ P
Sbjct: 112 LSVVRCLLIEPFP 124
>AT1G16890.3 | Symbols: UBC36 | ubiquitin-conjugating enzyme 36 |
chr1:5776550-5778327 REVERSE LENGTH=162
Length = 162
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 458 ESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVYYHSGGLRLNPNLYNCGKV 517
E + +I+G +PY G+F ++F P YP P+V + + +PN+ G++
Sbjct: 40 EENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKI--YHPNIDKLGRI 97
Query: 518 CLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLI 551
CL +L +KW P + I VL+SIQ L+
Sbjct: 98 CLDIL-------KDKWSPALQ-IRTVLLSIQALL 123
>AT5G41700.3 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677021 FORWARD LENGTH=145
Length = 145
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQ 548
PP+V + + +PN+ + G +CL +L E+W P + TI +V + Q
Sbjct: 63 KPPKVAFRTKV--FHPNINSNGSICLDIL-------KEQWSPAL-TISKVTLIFQ 107
>AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enzyme
36 | chr1:5776550-5778327 REVERSE LENGTH=153
Length = 153
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 437 IQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPP 496
I+E +LL + P I E + +I+G +PY G+F ++F P YP P
Sbjct: 11 IKETQRLLSEPAPG-ISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAP 69
Query: 497 QVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLILNTKP 556
+V + + +PN+ G++CL +L +KW P + I VL+SIQ L+ P
Sbjct: 70 KVRFLTK--IYHPNIDKLGRICLDIL-------KDKWSPALQ-IRTVLLSIQALLSAPNP 119
>AT5G59300.1 | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein 7 |
chr5:23919868-23921304 REVERSE LENGTH=203
Length = 203
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 456 VYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVYYHSGGLRLNPNLYNCG 515
V E I IIG T Y G F + FP YPN PP V + S +PN+Y+ G
Sbjct: 66 VDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSD--MWHPNVYSDG 123
Query: 516 KVCLSLL----NTWSGSK--NEKWLPGVSTILQVLVSIQGLI 551
+VC+S+L + SG + +E+W P V T+ +++SI ++
Sbjct: 124 RVCISILHPPGDDPSGYELASERWTP-VHTVESIMLSIISML 164
>AT3G46460.1 | Symbols: UBC13 | ubiquitin-conjugating enzyme 13 |
chr3:17096120-17097315 REVERSE LENGTH=166
Length = 166
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 456 VYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVYYHSGGLRLNPNLYNCG 515
V E I IIG T Y G F+ + FP YPN PP V + S +PN+Y G
Sbjct: 29 VDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSD--IWHPNVYPDG 86
Query: 516 KVCLSLL----NTWSGSK--NEKWLPGVSTILQVLVSIQGLI 551
+VC+S+L + SG + +E+W P V T+ +++SI ++
Sbjct: 87 RVCISILHPPGDDPSGYELASERWTP-VHTVESIMLSIISML 127
>AT5G53300.3 | Symbols: | ubiquitin-conjugating enzyme 10 |
chr5:21633187-21633989 REVERSE LENGTH=109
Length = 109
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 434 AKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPN 493
+KRI +E K L+K+ P + + +A I+G +PY G+F + FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 494 VPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVS 538
PP+V + + +PN+ + G +CL +L E+W P ++
Sbjct: 63 KPPKVAFRTK--VFHPNINSNGSICLDIL-------KEQWSPALT 98
>AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enzyme
36 | chr1:5776550-5777903 REVERSE LENGTH=120
Length = 120
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 466 AVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTW 525
+I+G +PY G+F ++F P YP P+V + + +PN+ G++CL +L
Sbjct: 6 VMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTK--IYHPNIDKLGRICLDIL--- 60
Query: 526 SGSKNEKWLPGVSTILQVLVSIQGLI 551
+KW P + I VL+SIQ L+
Sbjct: 61 ----KDKWSPALQ-IRTVLLSIQALL 81
>AT1G17280.2 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |
chr1:5917146-5919162 REVERSE LENGTH=237
Length = 237
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 431 KDWAKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSG 490
K KR+Q+E++ L K + R + I V+ G+EGTP+ G ++ + FP
Sbjct: 4 KACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 491 YPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGL 550
YP PP + + N K+CLS+ + S N W VS+IL L+S
Sbjct: 64 YPYKPPGITMTTP----NGRFMTQKKICLSMSDFHPESWNPMW--SVSSILTGLLS---F 114
Query: 551 ILNTKP 556
+++T P
Sbjct: 115 MMDTSP 120
>AT1G17280.1 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |
chr1:5917146-5919162 REVERSE LENGTH=237
Length = 237
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 431 KDWAKRIQEEWKLLEKNLPDTIFVRVYESRIDLLRAVIIGAEGTPYHDGLFFFDVFFPSG 490
K KR+Q+E++ L K + R + I V+ G+EGTP+ G ++ + FP
Sbjct: 4 KACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 491 YPNVPPQVYYHSGGLRLNPNLYNCGKVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGL 550
YP PP + + N K+CLS+ + S N W VS+IL L+S
Sbjct: 64 YPYKPPGITMTTP----NGRFMTQKKICLSMSDFHPESWNPMW--SVSSILTGLLS---F 114
Query: 551 ILNTKP 556
+++T P
Sbjct: 115 MMDTSP 120