Miyakogusa Predicted Gene

Lj0g3v0326889.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0326889.1 tr|B9NKJ8|B9NKJ8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_591069 PE=4 SV=1,60.53,0.00006,
,CUFF.22237.1
         (144 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G53035.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   199   7e-52
AT3G15358.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   187   2e-48

>AT1G53035.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 23 plant structures; EXPRESSED
           DURING: 13 growth stages; BEST Arabidopsis thaliana
           protein match is: unknown protein (TAIR:AT3G15358.1);
           Has 49 Blast hits to 49 proteins in 9 species: Archae -
           0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49;
           Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
           | chr1:19761866-19762318 REVERSE LENGTH=150
          Length = 150

 Score =  199 bits (505), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 93/144 (64%), Positives = 119/144 (82%)

Query: 1   MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
           M  S+F +IC LHS IAL+ G +M+FY+++ ++FG G E ASKL+GST HD+LLI+ S S
Sbjct: 7   MNPSLFRVICILHSIIALTSGTLMMFYTEKASIFGPGSEIASKLKGSTPHDELLIQISQS 66

Query: 61  FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
           FSGLLLFAIG++L MVS VKD++F SFFA G V+L+V MA+WR  FE KIEDLA +WP+ 
Sbjct: 67  FSGLLLFAIGLVLFMVSFVKDKEFHSFFAGGSVILYVLMAMWRVLFEWKIEDLAYEWPKQ 126

Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
           A+G+IALA+SWVFFLV+SWREKYD
Sbjct: 127 ALGDIALAISWVFFLVYSWREKYD 150


>AT3G15358.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; BEST Arabidopsis thaliana protein match is:
           unknown protein (TAIR:AT1G53035.1); Has 35333 Blast hits
           to 34131 proteins in 2444 species: Archae - 798;
           Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
           531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
           BLink). | chr3:5178205-5178639 FORWARD LENGTH=144
          Length = 144

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 89/144 (61%), Positives = 117/144 (81%)

Query: 1   MVSSVFTLICFLHSAIALSCGAMMIFYSKEITVFGRGPETASKLQGSTSHDQLLIKTSDS 60
           M S +F +IC LHS IAL+ G +M+FY+++ ++FG G + A+KL+GST HD+ LI+ S S
Sbjct: 1   MNSYLFRVICILHSIIALTSGTLMMFYTEKASIFGHGSDIANKLKGSTPHDEQLIQISQS 60

Query: 61  FSGLLLFAIGILLVMVSLVKDRDFQSFFAKGCVLLHVSMAVWRFFFERKIEDLASDWPRH 120
           FSGLLLFAIG++L MVS VKDR+F SFFA G V+L++ MA+WR  FE KIEDLA + P+ 
Sbjct: 61  FSGLLLFAIGLVLFMVSFVKDREFHSFFAAGSVILYMVMALWRVMFEWKIEDLAFECPKQ 120

Query: 121 AVGNIALAVSWVFFLVFSWREKYD 144
           A+G+IALAVSWVFFLV++WREKYD
Sbjct: 121 ALGDIALAVSWVFFLVYTWREKYD 144