Miyakogusa Predicted Gene
- Lj0g3v0326859.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0326859.1 tr|B9P974|B9P974_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_793950 PE=4
SV=1,57.89,0.000000000000001,seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL;
coiled-coil,NULL,NODE_39419_length_2372_cov_32.270237.path2.1
(622 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G27500.1 | Symbols: PPI1 | proton pump interactor 1 | chr4:13... 422 e-118
AT3G15340.1 | Symbols: PPI2 | proton pump interactor 2 | chr3:51... 199 6e-51
AT5G36690.1 | Symbols: | AT5G36690 and AT5G36780 represent iden... 192 5e-49
AT5G36780.1 | Symbols: | AT5G36780 and AT5G36690 represent iden... 192 5e-49
AT3G15340.2 | Symbols: PPI2 | proton pump interactor 2 | chr3:51... 154 2e-37
AT1G20970.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 122 9e-28
AT1G53110.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 120 4e-27
>AT4G27500.1 | Symbols: PPI1 | proton pump interactor 1 |
chr4:13743614-13745900 FORWARD LENGTH=612
Length = 612
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/494 (48%), Positives = 322/494 (65%), Gaps = 35/494 (7%)
Query: 1 MTVEVV---GFEMVPGPVENIAEGEKSVSHETENGKLEQEPGAAEPVKSGSDGNEAAKAE 57
M VEVV GFE+ P P E E +NGKL+Q G P+ GS G AE
Sbjct: 1 MGVEVVNSGGFEVAPAPFEGKPE---------KNGKLDQGKGDDAPINFGSVGELPKNAE 51
Query: 58 VDG--VPDSSGPKDATEEWPAPQQIHSFYFVRFRPYDDPDIKSKVDKLDKEIYLTNQARF 115
+ V +S PK+A EEWP +QIHSFY V++R Y DP IK+K+D DKE+ N+AR
Sbjct: 52 ENNNKVVNSDAPKNAAEEWPVAKQIHSFYLVKYRSYADPKIKAKLDLADKELEKLNKART 111
Query: 116 QITEALKAKRSERAELISQIKSLRDDNRQFQSIVDEKIKEIEPLQQALGKLR-NANSSGQ 174
+ + L+AKR+ER+EL + L+ + + F ++ DEK KE+EPLQQALGKLR N S +
Sbjct: 112 GVLDKLRAKRAERSELFDLLDPLKSERKGFNTMFDEKRKEMEPLQQALGKLRSNDGGSAR 171
Query: 175 G-GLCSSEKELNDTIYSLQYRIQHESIPLTEEKQILREIKQLEGTRDKVIANASLRAKVQ 233
G +CSSE+ELN IYS QYRIQHESIPLTEEKQIL+EI+ LEGTRDKVIANA++RAK++
Sbjct: 172 GPAICSSEEELNSMIYSYQYRIQHESIPLTEEKQILKEIRLLEGTRDKVIANAAMRAKIK 231
Query: 234 DSVGPREDIHDQVKLIGGDLDGVKKERQVIRSKIKQLDDALKVIDRDLQSLQEELAAVTQ 293
+S+G ++DI QVKL+G LDGVKKERQ I ++I +L + LK ++ L+ EL V++
Sbjct: 232 ESMGQKDDIQGQVKLMGAGLDGVKKERQAISARINELSEKLKATKDEITVLENELKTVSE 291
Query: 294 KREKAFGSIQQLRKQRDEGNTHFFQSRTILSKAREVAAKKDIDALGELSQTEVEKFMSLW 353
KR+KA+ +I LR+QRDE N+ ++Q+RT+L+KAR++AA+K+I L L+ EVEKF+SLW
Sbjct: 292 KRDKAYSNIHDLRRQRDETNSEYYQNRTVLNKARDLAAQKNISELEALANAEVEKFISLW 351
Query: 354 NSDKSFRNDYEKRILPSLDMRQLSRDGRMRNPDERPLLE-EPKPA----AETEKLPKSSV 408
S K+FR DYEKRIL SLD RQLSRDGRMRNPDE+PL+ E P+ +ETE +PK+
Sbjct: 352 CSKKNFREDYEKRILQSLDSRQLSRDGRMRNPDEKPLIAPEAAPSKATPSETEVVPKAKA 411
Query: 409 XXXXXXXXXXXXXXTLPAPKVQKETKNKGKNLKPSLAINDVEDADE---YEYENPHKDAP 465
+ APK + K ++ + +V D D+ Y P K+
Sbjct: 412 -------KPQPKEEPVSAPKPDATVAQNTEKAKDAVKVKNVADDDDDEVYGLGKPQKE-- 462
Query: 466 VKEPEIDPAKLKQM 479
E +D A K+M
Sbjct: 463 --EKPVDAATAKEM 474
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 558 VQPSAPVKEKAVKEHVVRSRSRAKAPEAIPKAILKRRRSNDYWIWVASGA 607
VQ P KEK KE +R+R+R + PE IP+AILKR++S +YW++ A A
Sbjct: 548 VQEEKPQKEKVFKEKPIRNRTRGRGPETIPRAILKRKKSTNYWVYAAPAA 597
>AT3G15340.1 | Symbols: PPI2 | proton pump interactor 2 |
chr3:5160016-5162305 REVERSE LENGTH=589
Length = 589
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 204/343 (59%), Gaps = 14/343 (4%)
Query: 65 SGPKDATEEWPAPQQIHSFYFVRFRPYDDPDIKSKVDKLDKEIYLTNQARFQITEALKAK 124
S P ATEE ++ SFYFV+ YDDP+IK+K+D+ EI N+ R ++ A +++
Sbjct: 51 SSPGGATEEDFPEEKPFSFYFVKQPAYDDPEIKAKIDEAGHEINRYNKDRIVVSNAQESE 110
Query: 125 RSERAELISQIKSLRDDNRQFQSIVDEKIKEIEPLQQALGKLRNANSSGQGGLCSSEKEL 184
++E L Q+KSL + ++ +++EK E + L ++L RN S LC S++EL
Sbjct: 111 KAEILSLFGQMKSLVSKSEGYRVVIEEKKMEFDALHESL---RNLRCSTSDQLCFSKEEL 167
Query: 185 NDTIYSLQYRIQHESIPLTEEKQILREIKQLEGTRDKVIANASLRAKVQDSVGPREDIHD 244
+ IY Y+I+H SI EE +L+E ++ +G V++ +DS+ +E +
Sbjct: 168 DHLIYIAHYQIEHGSIGFEEEDWVLKETEKADGI---VLS--------EDSLAEKEASIN 216
Query: 245 QVKLIGGDLDGVKKERQVIRSKIKQLDDALKVIDRDLQSLQEELAAVTQKREKAFGSIQQ 304
+VK + +L+ VKKE I KI L D + +L+ L + A + ++R++++ I+
Sbjct: 217 RVKSMAVELNEVKKELDAITWKINHLSDKVGKSQNNLRVLDVKKAHILEERDRSYERIKM 276
Query: 305 LRKQRDEGNTHFFQSRTILSKAREVAAKKDIDALGELSQTEVEKFMSLWNSDKSFRNDYE 364
LR QRD+G F+QS ++ KARE+AA ++ L + +E ++FM+ WN DK+FR+DY
Sbjct: 277 LRIQRDKGKAAFYQSLPVMRKARELAASGNVRDLEVFASSEADRFMTQWNDDKAFRDDYV 336
Query: 365 KRILPSLDMRQLSRDGRMRNPDERPLLEEPKPAAETEKLPKSS 407
KRI PSL RQL++DGR+++P+ + + E+ P EK+ +++
Sbjct: 337 KRISPSLCERQLNQDGRIKDPEVQVVWEKKVPVKGGEKVHETN 379
>AT5G36690.1 | Symbols: | AT5G36690 and AT5G36780 represent
identical copies. The duplication within clone F27C7 is
believed an artifact with only one true copy existing. |
chr5:14415185-14417288 REVERSE LENGTH=576
Length = 576
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 220/394 (55%), Gaps = 42/394 (10%)
Query: 7 GFEMVPGPVEN---IAEGEKSVSHETENGKLEQEPGAAEPVKSGSDGNEAAKAEVDGVPD 63
GFE+VP P N + E ++S+++ +E E+E + + SG D + AE D
Sbjct: 10 GFEVVPSPEINDLILYECDQSLTN-SEVTTDEEE----DTIFSGGDSSSGLAAE----ED 60
Query: 64 SSGPKDATEEWPAPQQIHSFYFVRFRPYDDPDIKSKVDKLDKEIYLTNQARFQITEALKA 123
SSG K P SFY V+ YD+P+IK+K+D+ ++EI+ N+ R + A K+
Sbjct: 61 SSGDK------PL-----SFYIVKQPVYDNPEIKAKIDEANQEIFRCNELRINVLSAKKS 109
Query: 124 KRSERAELISQIKSLRDDNRQFQSIVDEKIKEIEPLQQALGKLRNANSSGQGGLCSSEKE 183
+ +E + L +Q++SL + ++ +++EK KE + L +AL RN + LC +++E
Sbjct: 110 ELAEVSSLYTQMESLVPQSEGYRMVIEEKKKEFDTLLEAL---RNLRCTTSDQLCFTKEE 166
Query: 184 LNDTIYSLQYRIQHESIPLTEEKQILREIKQLEGTRDKVIANASLRAKVQDSVGPREDIH 243
L+ Y QY+I++ SI L EE +L+E ++ +G + +E
Sbjct: 167 LDHLSYIAQYQIEYGSIGLEEEDWMLKETEKPDGI----------------ILSEKEASI 210
Query: 244 DQVKLIGGDLDGVKKERQVIRSKIKQLDDALKVIDRDLQSLQEELAAVTQKREKAFGSIQ 303
++VK + +L+ VK E I KI L D L +++ L E A + +KR++ + I+
Sbjct: 211 NRVKSMALELNEVKNELDAITWKINDLSDKLWKSQNNIRVLDLEKAHILEKRDRFYARIK 270
Query: 304 QLRKQRDEGNTHFFQSRTILSKAREVAAKKDIDALGELSQTEVEKFMSLWNSDKSFRNDY 363
LR QRD+GN FFQS +++ KA+E+AA ++ L + +EV++FM+LWN DK+FR DY
Sbjct: 271 MLRIQRDKGNAAFFQSLSVMCKAKELAASGNVRELEVFASSEVDRFMTLWNDDKAFREDY 330
Query: 364 EKRILPSLDMRQLSRDGRMRNPDERPLLEEPKPA 397
+RI SL R+L+ DGR+++ D + E+ P
Sbjct: 331 VRRISHSLCERELNEDGRIKDADLQIFWEKKVPV 364
>AT5G36780.1 | Symbols: | AT5G36780 and AT5G36690 represent
identical copies. The duplication within clone F27C7 is
believed an artifact with only one true copy existing. |
chr5:14474485-14476588 REVERSE LENGTH=576
Length = 576
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 220/394 (55%), Gaps = 42/394 (10%)
Query: 7 GFEMVPGPVEN---IAEGEKSVSHETENGKLEQEPGAAEPVKSGSDGNEAAKAEVDGVPD 63
GFE+VP P N + E ++S+++ +E E+E + + SG D + AE D
Sbjct: 10 GFEVVPSPEINDLILYECDQSLTN-SEVTTDEEE----DTIFSGGDSSSGLAAE----ED 60
Query: 64 SSGPKDATEEWPAPQQIHSFYFVRFRPYDDPDIKSKVDKLDKEIYLTNQARFQITEALKA 123
SSG K P SFY V+ YD+P+IK+K+D+ ++EI+ N+ R + A K+
Sbjct: 61 SSGDK------PL-----SFYIVKQPVYDNPEIKAKIDEANQEIFRCNELRINVLSAKKS 109
Query: 124 KRSERAELISQIKSLRDDNRQFQSIVDEKIKEIEPLQQALGKLRNANSSGQGGLCSSEKE 183
+ +E + L +Q++SL + ++ +++EK KE + L +AL RN + LC +++E
Sbjct: 110 ELAEVSSLYTQMESLVPQSEGYRMVIEEKKKEFDTLLEAL---RNLRCTTSDQLCFTKEE 166
Query: 184 LNDTIYSLQYRIQHESIPLTEEKQILREIKQLEGTRDKVIANASLRAKVQDSVGPREDIH 243
L+ Y QY+I++ SI L EE +L+E ++ +G + +E
Sbjct: 167 LDHLSYIAQYQIEYGSIGLEEEDWMLKETEKPDGI----------------ILSEKEASI 210
Query: 244 DQVKLIGGDLDGVKKERQVIRSKIKQLDDALKVIDRDLQSLQEELAAVTQKREKAFGSIQ 303
++VK + +L+ VK E I KI L D L +++ L E A + +KR++ + I+
Sbjct: 211 NRVKSMALELNEVKNELDAITWKINDLSDKLWKSQNNIRVLDLEKAHILEKRDRFYARIK 270
Query: 304 QLRKQRDEGNTHFFQSRTILSKAREVAAKKDIDALGELSQTEVEKFMSLWNSDKSFRNDY 363
LR QRD+GN FFQS +++ KA+E+AA ++ L + +EV++FM+LWN DK+FR DY
Sbjct: 271 MLRIQRDKGNAAFFQSLSVMCKAKELAASGNVRELEVFASSEVDRFMTLWNDDKAFREDY 330
Query: 364 EKRILPSLDMRQLSRDGRMRNPDERPLLEEPKPA 397
+RI SL R+L+ DGR+++ D + E+ P
Sbjct: 331 VRRISHSLCERELNEDGRIKDADLQIFWEKKVPV 364
>AT3G15340.2 | Symbols: PPI2 | proton pump interactor 2 |
chr3:5160016-5161874 REVERSE LENGTH=469
Length = 469
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 162/273 (59%), Gaps = 14/273 (5%)
Query: 135 IKSLRDDNRQFQSIVDEKIKEIEPLQQALGKLRNANSSGQGGLCSSEKELNDTIYSLQYR 194
+KSL + ++ +++EK E + L ++L RN S LC S++EL+ IY Y+
Sbjct: 1 MKSLVSKSEGYRVVIEEKKMEFDALHESL---RNLRCSTSDQLCFSKEELDHLIYIAHYQ 57
Query: 195 IQHESIPLTEEKQILREIKQLEGTRDKVIANASLRAKVQDSVGPREDIHDQVKLIGGDLD 254
I+H SI EE +L+E ++ +G V++ +DS+ +E ++VK + +L+
Sbjct: 58 IEHGSIGFEEEDWVLKETEKADGI---VLS--------EDSLAEKEASINRVKSMAVELN 106
Query: 255 GVKKERQVIRSKIKQLDDALKVIDRDLQSLQEELAAVTQKREKAFGSIQQLRKQRDEGNT 314
VKKE I KI L D + +L+ L + A + ++R++++ I+ LR QRD+G
Sbjct: 107 EVKKELDAITWKINHLSDKVGKSQNNLRVLDVKKAHILEERDRSYERIKMLRIQRDKGKA 166
Query: 315 HFFQSRTILSKAREVAAKKDIDALGELSQTEVEKFMSLWNSDKSFRNDYEKRILPSLDMR 374
F+QS ++ KARE+AA ++ L + +E ++FM+ WN DK+FR+DY KRI PSL R
Sbjct: 167 AFYQSLPVMRKARELAASGNVRDLEVFASSEADRFMTQWNDDKAFRDDYVKRISPSLCER 226
Query: 375 QLSRDGRMRNPDERPLLEEPKPAAETEKLPKSS 407
QL++DGR+++P+ + + E+ P EK+ +++
Sbjct: 227 QLNQDGRIKDPEVQVVWEKKVPVKGGEKVHETN 259
>AT1G20970.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plasma membrane, vacuole; EXPRESSED IN: guard cell,
cultured cell; BEST Arabidopsis thaliana protein match
is: proton pump interactor 1 (TAIR:AT4G27500.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink). | chr1:7314338-7319246 FORWARD
LENGTH=1364
Length = 1364
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 170/328 (51%), Gaps = 20/328 (6%)
Query: 69 DATEEWPAPQQIHS--FYFV-RFRPYDDPDIKSKVDKLDKEIYLTNQARFQITEALKAKR 125
DA+E +I FYF+ R YDD + ++ ++++ Q R + ++ R
Sbjct: 768 DASEGLTVAAEIEKRPFYFLPRVPRYDDEKLAEQLKHAEEQVDQKTQNRDALRADIQKIR 827
Query: 126 SERAELISQIKSLRDDNRQFQSIVDEKIKEIEPLQQALGKLRNANSSGQGGLCSSEKELN 185
+ + K++ + R + + K +EIE LQ + ++++A +S +++
Sbjct: 828 AICKDYDISYKAVMAEERSARKAMHSKRQEIEALQSMISRVKSA---------ASVDDID 878
Query: 186 DTIYSLQYRIQHESIPLTEEKQILREIKQLEGTRDKVIANASLRAKVQDSVGPREDIHDQ 245
+ ++++ +QH ++ L EEK +REIKQL+ R+++ ++ + +V+ ++ +E ++
Sbjct: 879 SRVRNMEHTMQHTTLSLNEEKGFMREIKQLKQLREQISSSMGTKDEVKQALDEKEKTEER 938
Query: 246 VKLIGGDLDGVK----KERQVIRSKIKQLDDALKVIDRDLQSLQEELAAVTQKREKAFGS 301
+K++ +LD ++ K ++ ++ K+ D + + LQE+ A R++AF
Sbjct: 939 LKVLRKELDALRNDLSKAEEITKAAKKKCDGEWEAQSK----LQEQFRAADAVRQEAFVH 994
Query: 302 IQQLRKQRDEGNTHFFQSRTILSKAREVAAKKDIDALGELSQTEVEKFMSLWNSDKSFRN 361
+Q L+KQ+ E N +FF+ R A E+A KKD AL L +VE FM++WN+D FR
Sbjct: 995 LQDLKKQQREKNKYFFKYRDNSRAASEMALKKDRAALQSLCSDQVENFMNMWNNDDEFRK 1054
Query: 362 DYEKRILPSLDMRQLSRDGRMRNPDERP 389
Y K S R + DGR PDE P
Sbjct: 1055 YYVKSNTRSTFRRLGTLDGRSLGPDEEP 1082
>AT1G53110.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: proton pump interactor 2 (TAIR:AT3G15340.1); Has
9980 Blast hits to 7312 proteins in 825 species: Archae
- 146; Bacteria - 1301; Metazoa - 3338; Fungi - 830;
Plants - 588; Viruses - 42; Other Eukaryotes - 3735
(source: NCBI BLink). | chr1:19790434-19792016 FORWARD
LENGTH=439
Length = 439
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 98/137 (71%)
Query: 248 LIGGDLDGVKKERQVIRSKIKQLDDALKVIDRDLQSLQEELAAVTQKREKAFGSIQQLRK 307
L+ ++ V+KE++V+R +I +L + L I +++ L ++A V +R+KA I+ LR
Sbjct: 107 LMSMKINEVEKEQEVVRGRIYRLGERLSEIKMEIELLDVQMACVLNQRDKAVERIKFLRM 166
Query: 308 QRDEGNTHFFQSRTILSKAREVAAKKDIDALGELSQTEVEKFMSLWNSDKSFRNDYEKRI 367
QRD+GN F+QSR ++ KA E+AA ++ L EL+ +EVEKFMS WN+DK+FR++Y+KRI
Sbjct: 167 QRDKGNAAFYQSRVVMKKAIELAASGNVRDLEELADSEVEKFMSRWNNDKAFRDNYKKRI 226
Query: 368 LPSLDMRQLSRDGRMRN 384
LPS++ R+L D ++R+
Sbjct: 227 LPSVNERKLRCDVQIRD 243
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 72 EEWPAPQQIHSFYFVRFRPYDDPDIKSKVDKLDKEIYLTNQARFQITEALKAKRSERAEL 131
EEW + FYFV+ YDDP+IK+K+D+ D E+Y N R I LK+KR+ R L
Sbjct: 42 EEWCGESS-YCFYFVKQFAYDDPEIKAKIDEADHEVYHCNTDRIHIANRLKSKRAARLSL 100
Query: 132 ISQIKSLRDDNRQFQSIVDEKIKEIEPLQQAL 163
++ +++L + KI E+E Q+ +
Sbjct: 101 VASMETL----------MSMKINEVEKEQEVV 122