Miyakogusa Predicted Gene

Lj0g3v0326839.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0326839.1 NODE_63401_length_1142_cov_56.246937.path2.1
         (164 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G15300.1 | Symbols:  | VQ motif-containing protein | chr3:514...   111   2e-25
AT1G28280.2 | Symbols:  | VQ motif-containing protein | chr1:988...   109   8e-25
AT1G28280.1 | Symbols:  | VQ motif-containing protein | chr1:988...   109   1e-24
AT5G53830.1 | Symbols:  | VQ motif-containing protein | chr5:218...    96   1e-20
AT2G33780.1 | Symbols:  | VQ motif-containing protein | chr2:142...    67   4e-12

>AT3G15300.1 | Symbols:  | VQ motif-containing protein |
           chr3:5147551-5148210 REVERSE LENGTH=219
          Length = 219

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/146 (52%), Positives = 86/146 (58%), Gaps = 19/146 (13%)

Query: 28  NFNIPPMKTA-PKKQQQQGFKLYERR---NYNNSLKNTLIINTFM-KPNSAEICRFXXXX 82
           NF IPP+KTA PKK    G KLYERR    +NN+LKN+L+INT M     A   RF    
Sbjct: 77  NFVIPPIKTAQPKKHS--GNKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRN 134

Query: 83  XXXXXXXXXDFPSLAL-SPVTPL-------NDDPFDKXXXXXXXXXXXXKAIADKGFYLH 134
                    DFP LAL SPVTPL         DPFDK            + IADKG+YLH
Sbjct: 135 QEILSPSCLDFPKLALNSPVTPLKQGTNGNEGDPFDKMSPLSEEE----RGIADKGYYLH 190

Query: 135 PSPMSTPRGFEPQLLPLFPVTSPRVT 160
            SP+STPR  EPQLLPLFPVTSPR++
Sbjct: 191 RSPISTPRDSEPQLLPLFPVTSPRLS 216


>AT1G28280.2 | Symbols:  | VQ motif-containing protein |
           chr1:9886297-9887395 REVERSE LENGTH=243
          Length = 243

 Score =  109 bits (272), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 94/173 (54%), Gaps = 19/173 (10%)

Query: 1   MLTGSSD------TTKPAPCSKLHLQDPVPSSRNFNIPPMKTAPKKQQQQ----GFKLYE 50
           MLTGS++      + KP P    H  DP  +  +F+IPP+K  P K+Q      GF+LYE
Sbjct: 73  MLTGSAERPKHGSSLKPNPTH--HQPDPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYE 130

Query: 51  RRNYNNSLKNTLIINTFMKPNSAEICRFXXXXXXXXXXXXXDFPSLALSPVTPLNDDPFD 110
           RRN   +LK   +   F   NSA    F             DFPSL LSPVTPL  DPFD
Sbjct: 131 RRNSMKNLKINPLNPVFNPVNSA----FSPRKPEILSPSILDFPSLVLSPVTPLIPDPFD 186

Query: 111 KXXXXXXX---XXXXXKAIADKGFYLHPSPMSTPRGFEPQLLPLFPVTSPRVT 160
           +               KA+ ++GFYLHPSP +TP   EP+LLPLFPVTSPRV+
Sbjct: 187 RSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSPRVS 239


>AT1G28280.1 | Symbols:  | VQ motif-containing protein |
           chr1:9886652-9887395 REVERSE LENGTH=247
          Length = 247

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/170 (44%), Positives = 91/170 (53%), Gaps = 15/170 (8%)

Query: 1   MLTGSSDTTKPA----PCSKLHLQDPVPSSRNFNIPPMKTAPKKQQQQ----GFKLYERR 52
           MLTGS++  K      P    H  DP  +  +F+IPP+K  P K+Q      GF+LYERR
Sbjct: 73  MLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERR 132

Query: 53  NYNNSLKNTLIINTFMKPNSAEICRFXXXXXXXXXXXXXDFPSLALSPVTPLNDDPFDKX 112
           N   +LK   +   F   NSA    F             DFPSL LSPVTPL  DPFD+ 
Sbjct: 133 NSMKNLKINPLNPVFNPVNSA----FSPRKPEILSPSILDFPSLVLSPVTPLIPDPFDRS 188

Query: 113 XXXXXX---XXXXXKAIADKGFYLHPSPMSTPRGFEPQLLPLFPVTSPRV 159
                         KA+ ++GFYLHPSP +TP   EP+LLPLFPVTSPRV
Sbjct: 189 GSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSPRV 238


>AT5G53830.1 | Symbols:  | VQ motif-containing protein |
           chr5:21857057-21857788 FORWARD LENGTH=243
          Length = 243

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 85/168 (50%), Gaps = 34/168 (20%)

Query: 18  HLQDPVPSSRN-----FNIPPMKTAPKKQQQQGFKLYERRNYNNSL--KNTLIINTFMKP 70
           H + P P + N     F+IPP+K      +   FKLYERR  NN++  KN L+INT    
Sbjct: 78  HHEAPSPVNNNNKGSSFSIPPIK------KTNSFKLYERRQNNNNMFAKNDLMINTLRLQ 131

Query: 71  NSAEIC------------RFXXXXXXXXXX-----XXXDFPSLAL-SPVTPL--NDDPFD 110
           NS  +             RF                  DFP L L SPVTPL  NDDPF+
Sbjct: 132 NSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSPSMLDFPKLGLNSPVTPLRSNDDPFN 191

Query: 111 KXX-XXXXXXXXXXKAIADKGFYLHPSPMSTPRGFEPQLLPLFPVTSP 157
           K             KAIADKGFYLHPSP+STPR  +P LLPLFPV SP
Sbjct: 192 KSSPLSLGNSSEEDKAIADKGFYLHPSPVSTPRDSQPLLLPLFPVASP 239


>AT2G33780.1 | Symbols:  | VQ motif-containing protein |
           chr2:14291117-14291731 REVERSE LENGTH=204
          Length = 204

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 68/135 (50%), Gaps = 24/135 (17%)

Query: 30  NIPPMKTAPKKQQQQGFKLYERRNYNNSLKNTLIIN-TFMKPNSAEICRFXXXXXXXXXX 88
           +IPP+K    K+Q   F+L ERRN   S+K+ L IN T   P   EI             
Sbjct: 73  SIPPIKAVTNKKQSSSFRLSERRN---SMKHYLNINPTHSGP--PEIL----------TP 117

Query: 89  XXXDFPSLALSPVTPLNDDPFDK--------XXXXXXXXXXXXKAIADKGFYLHPSPMST 140
              +FP+L LSP TPL  DPF +                    ++I +KGFYL PSP +T
Sbjct: 118 TILNFPALDLSPDTPLMSDPFYRPGSFSQSPSDSKPSFDDDQERSIKEKGFYLRPSPSTT 177

Query: 141 PRGFEPQLLPLFPVT 155
           PR  EP+LL LFP+T
Sbjct: 178 PRDTEPRLLSLFPMT 192