Miyakogusa Predicted Gene
- Lj0g3v0326409.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0326409.1 Non Chatacterized Hit- tr|B9SJY8|B9SJY8_RICCO
ATP-dependent RNA helicase, putative OS=Ricinus
commun,77.38,0,SUBFAMILY NOT NAMED,NULL; ATP-DEPENDENT RNA
HELICASE,NULL; no description,NULL; no description,Doubl,CUFF.22199.1
(1096 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 1574 0.0
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 1413 0.0
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 1412 0.0
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 1273 0.0
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 855 0.0
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 573 e-163
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 514 e-145
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 357 3e-98
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 351 1e-96
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 345 9e-95
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 345 9e-95
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 338 1e-92
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 334 2e-91
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 323 3e-88
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 317 3e-86
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 313 4e-85
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 291 2e-78
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 248 1e-65
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 240 3e-63
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 199 1e-50
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 189 9e-48
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 167 3e-41
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 164 4e-40
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 145 2e-34
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 101 2e-21
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 1574 bits (4076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/1064 (71%), Positives = 886/1064 (83%), Gaps = 10/1064 (0%)
Query: 34 MAEWKHKLTMLLNDKSKQEEVSREKKDRRDFEQLAALAKIMGLYSHKYGKVVVFSKVPLP 93
+ +W + +MLL D KQE +SREKKDRRDF++LAALA +GLYSH Y KVVVFSK+PLP
Sbjct: 57 LDDWNKRFSMLLKDSLKQEVISREKKDRRDFDKLAALATTLGLYSHAYAKVVVFSKIPLP 116
Query: 94 NYRRDLDDKRPLREVNLHSTVLRRVDAYLEDYKTKKS-RMKKSFSELLSARPISSCGIGT 152
NYR DLDDK+P REVNLH+ +L+RV+AYL +Y +K S R+ + + +S S T
Sbjct: 117 NYRFDLDDKKPQREVNLHTDLLQRVEAYLTEYLSKSSNRIDRVPANSVSRTSSIS---ST 173
Query: 153 DEELYEQPELLISSKAVLETILWQKSLQMRDEQQAWQESPEGRRMLEFRCSLPAYKEKEA 212
DE EQP + ++K ILWQ+SLQ+RD QQ WQ S EG+RML+ R SLPA+K++ +
Sbjct: 174 DEWFSEQPLPISATK-----ILWQRSLQLRDRQQYWQASVEGQRMLDSRTSLPAFKQRHS 228
Query: 213 ILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVRGAVCNIICTQPRRISAISVSER 272
+L+AIS+NQV+VISGETGCGKTTQ+PQFILESEI + RGA +IICTQPRRISA+SVSER
Sbjct: 229 VLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRRISAMSVSER 288
Query: 273 VASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLVDRSLKGVTHIIVDEIHE 332
VA ERGE+LGESVGYKVRLEG+KGRDT LLFCTTGILLRRLLVDR+L+GVTH+IVDEIHE
Sbjct: 289 VAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHE 348
Query: 333 RGINEDFLLVVLKDLLARRRELKLILMSATLHADLFSSYFNGASIMKIPGFTYPVRTHFL 392
RG+NEDFLL++LKDLL+RR ELKLILMSATL A+LFSSYF GA ++ IPGFTYPVR+HFL
Sbjct: 349 RGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPVRSHFL 408
Query: 393 EDILETSGYRLTPENQIDDYGQERIWKMNKQAPRKRKSQIASAVEDALRDADFKDYSLQT 452
EDILE + YRLTP NQIDDYGQER WKMNKQ P+KRKSQI VEDALR ADFK++S +T
Sbjct: 409 EDILEMTRYRLTPYNQIDDYGQERTWKMNKQIPKKRKSQITFVVEDALRAADFKEFSPET 468
Query: 453 RESLSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDDISALKEKLLTHPVLGDPS 512
RESLSCW PDCIGFNLIE++LCNICENE PG +L+F+TGWDDIS+LKEKL HP+ G+P
Sbjct: 469 RESLSCWYPDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPD 528
Query: 513 QVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKESSY 572
V+LL CHGSM + EQRLIFEEP GVRKIVLATNIAETSITINDV FV+DCGKAKE+SY
Sbjct: 529 LVMLLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSY 588
Query: 573 DALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRCVYGAFAEYQLPEILRTPLQ 632
DALNNTPCLLP+WISKVS QQR+GRAGRV+PG+CYHLYP+CVY AFAEYQLPEILRTPL
Sbjct: 589 DALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLH 648
Query: 633 SLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYLTKFP 692
SLCLQIKSL LGSISEFLSRALQSPE+LAVQ AI +LKIIGALDENE+LT LG YL+K P
Sbjct: 649 SLCLQIKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLP 708
Query: 693 MEPKLGKMLIFGAIFNCLDPILTIAAGLSVRDPFLTPLDKKDLAEAAKSQFCHEYSDHLT 752
MEPKLGKMLI GAI CLDPILT+AAGLSVRDPFLTP DKKDLAEAAKSQF ++SDHL
Sbjct: 709 MEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLA 768
Query: 753 LVRAYEGWKDAEIDQAGQEYCWKNFLSAQSMKAIDGLRIEFLSLLKDIGLVDSNTTSCNS 812
LVRAYEGWK AE + A +YCWKNFLS QS++AID LR EF SLLKD GL+D N + CNS
Sbjct: 769 LVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNS 828
Query: 813 WSYDMYLIRAAVCYGLYPGICSVVHNEKSFSLKTMEDGQVLLHSNSVNARETKIPYPWLV 872
D L RA +CYG+YPGICSVVHNE+SFSLKTMEDGQVLL+SNS NARETKIPYPWLV
Sbjct: 829 EGNDANLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNSENARETKIPYPWLV 888
Query: 873 FNEKIKVNSVFLRDSTAVSDSVVLLFGGSISKGDTDGHLKMFGGYLEFFMKADVADMYLS 932
FNEKIKVNSVFLRDSTA SDS ++LFGGSISKGDTDGHLKM GGYLEFFMK DVA++Y +
Sbjct: 889 FNEKIKVNSVFLRDSTACSDSTLILFGGSISKGDTDGHLKMLGGYLEFFMKPDVAEIYQT 948
Query: 933 IRRELDIFIQSKLLSPMMGIHSFHELLSAVRFLISDNKGEGKFLFSCQLLGPSKPSTVSL 992
+++ELD IQ+KLL+P + + + ELLSA+R L+S++ +G+F+F Q+L P + S +S
Sbjct: 949 LKKELDELIQNKLLNPKVDMQAHRELLSAIRLLVSEDGCDGRFVFGHQILRPLEISALST 1008
Query: 993 PQALVSRTESGPGGDNSKSQLQTLLTRAGYDVPLYKTIQLKNNQFQSTVEFQGVQLMGQP 1052
+L SRTESGPGGDNSKSQLQT+LTRAGY VP+YKT QLKNN+FQ+TVEF Q+MGQP
Sbjct: 1009 KPSLFSRTESGPGGDNSKSQLQTILTRAGYTVPMYKTKQLKNNKFQTTVEFNETQIMGQP 1068
Query: 1053 CXXXXXXXXXXXXXXXXWLMSRSQTGNEYTNNMT-MLKKIKKDH 1095
C WL ++ +E N+M+ +LKK KKDH
Sbjct: 1069 CSNKKSAEKDAAAEAIQWLKGGAKESHEQVNHMSKLLKKGKKDH 1112
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 1413 bits (3658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/1089 (63%), Positives = 857/1089 (78%), Gaps = 12/1089 (1%)
Query: 10 SADLSSREFEVSSLSNQSGFPNDSMAEWKHKLTMLLNDKSKQEEVSREKKDRRDFEQLAA 69
S+D S R+ S +G D++ +W+ KLTMLL +K QE VSRE+KDRRDF+ ++A
Sbjct: 110 SSDESDRDVGSSQSQQMAGSTLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRRDFDHISA 169
Query: 70 LAKIMGLYSHKYGKVVVFSKVPLPNYRRDLDDKRPLREVNLHSTVLRRVDAYLEDYKTKK 129
LA MGL+S +Y K+VV SK PLPNYR DLDDKRP REV L + VDA+L + +K
Sbjct: 170 LATRMGLHSRQYSKIVVISKAPLPNYRPDLDDKRPQREVVLPFGLQSEVDAHLHSFLDQK 229
Query: 130 SRMKKSFSELLSARPISSCGIGTDEELYEQPELLISSKAVLETILWQKSLQMRDEQQAWQ 189
+ S+ +++ G G YE PE ++ + E IL +SLQ++ +QQ W
Sbjct: 230 KTLIPEMPRQNSSESLAN-GYGN----YETPETVMQNSLARERILRPRSLQLKSKQQQWV 284
Query: 190 ESPEGRRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSV 249
+SPEG++M+ FR +LPAYKEK+A+L AI+ NQV+V+SGETGCGKTTQLPQ+ILESEI +
Sbjct: 285 DSPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAA 344
Query: 250 RGAVCNIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGIL 309
RGA C+IICTQPRRISAISVSERVA+ERGE++GESVGYKVRLEGM+GRDT LLFCTTG+L
Sbjct: 345 RGATCSIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVL 404
Query: 310 LRRLLVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATLHADLFS 369
LRRLLVDRSLKGVTH++VDEIHERG+NEDFLL+VLKDLL RR +LKLILMSATL+A+LFS
Sbjct: 405 LRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFS 464
Query: 370 SYFNGASIMKIPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQERIWKMNKQAP-RKR 428
SYF GA M IPGFTYPVR HFLED LETSGYRLT NQIDDYG+E+ WKM KQA +KR
Sbjct: 465 SYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKR 524
Query: 429 KSQIASAVEDALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENERPGAVLVF 488
KS I+SAVEDAL ADFK Y+ +TR+SLSCW+PD IGFNLIE +LC+I + ERPGAVLVF
Sbjct: 525 KSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVLVF 584
Query: 489 MTGWDDISALKEKLLTHPVLGDPSQVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNI 548
MTGWDDI++LK +L H +LGDP++VLLL CHGSMASSEQRLIF+ P +G+RKIVLATN+
Sbjct: 585 MTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNM 644
Query: 549 AETSITINDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYH 608
AETSITINDVV+V+DCGKAKE+SYDALNNTPCLLP+WISK + +QR+GRAGRV PGECYH
Sbjct: 645 AETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYH 704
Query: 609 LYPRCVYGAFAEYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEY 668
LYPRCVY AFA+YQ PE+LRTPLQSLCLQIKSL LGSISEFLSRALQ PE L+VQNA+EY
Sbjct: 705 LYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNAVEY 764
Query: 669 LKIIGALDENENLTILGHYLTKFPMEPKLGKMLIFGAIFNCLDPILTIAAGLSVRDPFLT 728
LKIIGALD++ENLT LG L+ P+EPKLGKMLI GAIFNCLDP++T+ AGLSVRDPFL
Sbjct: 765 LKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLM 824
Query: 729 PLDKKDLAEAAKSQFC-HEYSDHLTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQSMKAID 787
P DKKDLAE A+S+F +YSDHLTLVRAY GWKDAE +G +YCWKNFLS+Q++KA+D
Sbjct: 825 PFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMD 884
Query: 788 GLRIEFLSLLKDIGLVDSNTTSCNSWSYDMYLIRAAVCYGLYPGICSVVHNEKSFSLKTM 847
+R +F +LLK+ L+D N C+ S+D +L+RA +C G++PG+CSVV+ EKS +LKTM
Sbjct: 885 SMRKQFFNLLKEASLID-NIEGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTM 943
Query: 848 EDGQVLLHSNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSISKGDT 907
EDGQVLL+S+SVN IP+PWLVFN+K+KVNSVFLRDSTAVSDSV+LLFG IS G
Sbjct: 944 EDGQVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGF 1003
Query: 908 DGHLKMFGGYLEFFMKADVADMYLSIRRELDIFIQSKLLSPMMGIHSFHELLSAVRFLIS 967
DGHLKM GGYLEFFMK +A YLS++RELD IQ+KL++P + I + +L++A+R L+S
Sbjct: 1004 DGHLKMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLMTAIRLLVS 1063
Query: 968 DNKGEGKFLFSCQLLGPSKPSTVSLPQALVSRTESGPGGDNSKSQLQTLLTRAGYDVPLY 1027
+++ EG+F++ + L P+ + A + + GG+N+K+QLQTLL RAG+ P+Y
Sbjct: 1064 EDQCEGRFVYGRKALSPTPAKKLKDVGAQLQNS----GGENNKNQLQTLLARAGHGSPVY 1119
Query: 1028 KTIQLKNNQFQSTVEFQGVQLMGQPCXXXXXXXXXXXXXXXXWLMSRSQTGNEYTNNMTM 1087
KT QLKNNQF+S V F G+ MG+PC WL S++ N+M+M
Sbjct: 1120 KTRQLKNNQFRSMVTFNGLDFMGKPCGSKKNAEKDAAHEALLWLQGESKSSLNDLNHMSM 1179
Query: 1088 LKKIKKDHN 1096
L K K N
Sbjct: 1180 LLKKNKSKN 1188
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 1412 bits (3656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/1086 (63%), Positives = 856/1086 (78%), Gaps = 12/1086 (1%)
Query: 10 SADLSSREFEVSSLSNQSGFPNDSMAEWKHKLTMLLNDKSKQEEVSREKKDRRDFEQLAA 69
S+D S R+ S +G D++ +W+ KLTMLL +K QE VSRE+KDRRDF+ ++A
Sbjct: 110 SSDESDRDVGSSQSQQMAGSTLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRRDFDHISA 169
Query: 70 LAKIMGLYSHKYGKVVVFSKVPLPNYRRDLDDKRPLREVNLHSTVLRRVDAYLEDYKTKK 129
LA MGL+S +Y K+VV SK PLPNYR DLDDKRP REV L + VDA+L + +K
Sbjct: 170 LATRMGLHSRQYSKIVVISKAPLPNYRPDLDDKRPQREVVLPFGLQSEVDAHLHSFLDQK 229
Query: 130 SRMKKSFSELLSARPISSCGIGTDEELYEQPELLISSKAVLETILWQKSLQMRDEQQAWQ 189
+ S+ +++ G G YE PE ++ + E IL +SLQ++ +QQ W
Sbjct: 230 KTLIPEMPRQNSSESLAN-GYGN----YETPETVMQNSLARERILRPRSLQLKSKQQQWV 284
Query: 190 ESPEGRRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSV 249
+SPEG++M+ FR +LPAYKEK+A+L AI+ NQV+V+SGETGCGKTTQLPQ+ILESEI +
Sbjct: 285 DSPEGQKMVGFRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAA 344
Query: 250 RGAVCNIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGIL 309
RGA C+IICTQPRRISAISVSERVA+ERGE++GESVGYKVRLEGM+GRDT LLFCTTG+L
Sbjct: 345 RGATCSIICTQPRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVL 404
Query: 310 LRRLLVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATLHADLFS 369
LRRLLVDRSLKGVTH++VDEIHERG+NEDFLL+VLKDLL RR +LKLILMSATL+A+LFS
Sbjct: 405 LRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFS 464
Query: 370 SYFNGASIMKIPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQERIWKMNKQAP-RKR 428
SYF GA M IPGFTYPVR HFLED LETSGYRLT NQIDDYG+E+ WKM KQA +KR
Sbjct: 465 SYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKR 524
Query: 429 KSQIASAVEDALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENERPGAVLVF 488
KS I+SAVEDAL ADFK Y+ +TR+SLSCW+PD IGFNLIE +LC+I + ERPGAVLVF
Sbjct: 525 KSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVLVF 584
Query: 489 MTGWDDISALKEKLLTHPVLGDPSQVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNI 548
MTGWDDI++LK +L H +LGDP++VLLL CHGSMASSEQRLIF+ P +G+RKIVLATN+
Sbjct: 585 MTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNM 644
Query: 549 AETSITINDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYH 608
AETSITINDVV+V+DCGKAKE+SYDALNNTPCLLP+WISK + +QR+GRAGRV PGECYH
Sbjct: 645 AETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYH 704
Query: 609 LYPRCVYGAFAEYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEY 668
LYPRCVY AFA+YQ PE+LRTPLQSLCLQIKSL LGSISEFLSRALQ PE L+VQNA+EY
Sbjct: 705 LYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNAVEY 764
Query: 669 LKIIGALDENENLTILGHYLTKFPMEPKLGKMLIFGAIFNCLDPILTIAAGLSVRDPFLT 728
LKIIGALD++ENLT LG L+ P+EPKLGKMLI GAIFNCLDP++T+ AGLSVRDPFL
Sbjct: 765 LKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLM 824
Query: 729 PLDKKDLAEAAKSQFC-HEYSDHLTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQSMKAID 787
P DKKDLAE A+S+F +YSDHLTLVRAY GWKDAE +G +YCWKNFLS+Q++KA+D
Sbjct: 825 PFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMD 884
Query: 788 GLRIEFLSLLKDIGLVDSNTTSCNSWSYDMYLIRAAVCYGLYPGICSVVHNEKSFSLKTM 847
+R +F +LLK+ L+D N C+ S+D +L+RA +C G++PG+CSVV+ EKS +LKTM
Sbjct: 885 SMRKQFFNLLKEASLID-NIEGCSKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTM 943
Query: 848 EDGQVLLHSNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSISKGDT 907
EDGQVLL+S+SVN IP+PWLVFN+K+KVNSVFLRDSTAVSDSV+LLFG IS G
Sbjct: 944 EDGQVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGF 1003
Query: 908 DGHLKMFGGYLEFFMKADVADMYLSIRRELDIFIQSKLLSPMMGIHSFHELLSAVRFLIS 967
DGHLKM GGYLEFFMK +A YLS++RELD IQ+KL++P + I + +L++A+R L+S
Sbjct: 1004 DGHLKMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKLVNPKLDIQLYDKLMTAIRLLVS 1063
Query: 968 DNKGEGKFLFSCQLLGPSKPSTVSLPQALVSRTESGPGGDNSKSQLQTLLTRAGYDVPLY 1027
+++ EG+F++ + L P+ + A + + GG+N+K+QLQTLL RAG+ P+Y
Sbjct: 1064 EDQCEGRFVYGRKALSPTPAKKLKDVGAQLQNS----GGENNKNQLQTLLARAGHGSPVY 1119
Query: 1028 KTIQLKNNQFQSTVEFQGVQLMGQPCXXXXXXXXXXXXXXXXWLMSRSQTGNEYTNNMTM 1087
KT QLKNNQF+S V F G+ MG+PC WL S++ N+M+M
Sbjct: 1120 KTRQLKNNQFRSMVTFNGLDFMGKPCGSKKNAEKDAAHEALLWLQGESKSSLNDLNHMSM 1179
Query: 1088 LKKIKK 1093
L K K
Sbjct: 1180 LLKKNK 1185
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 1273 bits (3294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/1079 (58%), Positives = 811/1079 (75%), Gaps = 25/1079 (2%)
Query: 13 LSSREFEVSSLSNQSGFPNDSMAEWKHKLTMLLNDKSKQEEVSREKKDRRDFEQLAALAK 72
S E+E +++ ++ EWK KL +LL + S+QE VSR+K+DRRD+EQ++ LAK
Sbjct: 73 FSDDEYECEFEEHKASSSVANVDEWKWKLGILLANDSEQEIVSRDKRDRRDYEQISNLAK 132
Query: 73 IMGLYSHKYGKVVVFSKVPLPNYRRDLDDKRPLREVNLHSTVLRRVDAYLEDYKTKKSRM 132
MGLYS YGKVVV SKVPLPNYR DLDDKRP REV L ++ RRV+ L+++
Sbjct: 133 RMGLYSEIYGKVVVASKVPLPNYRPDLDDKRPQREVVLPLSLQRRVEGLLQEHLD----- 187
Query: 133 KKSFSELLSARPISSCGIGTD-----EELYEQPELLISSKAVLETILWQKSLQMRDEQQA 187
S+ LS+ + C + EEL ++ +V+E +L ++S++MR+ Q+
Sbjct: 188 ----SQQLSSGKANECVADSQPPKQTEELPDENSDSFLDGSVMEKVLQRRSMRMRNMQRT 243
Query: 188 WQESPEGRRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIG 247
WQESPEGR MLEFR +LP++K+KE +L AI+RNQV+V+SGETGCGKTTQLPQ+ILESEI
Sbjct: 244 WQESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIE 303
Query: 248 SVRGAVCNIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTG 307
S RGA CNIICTQPRRISA++VSERV++ERGE LGE+VG+KVRLEGM+G++THLLFCT+G
Sbjct: 304 SGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSG 363
Query: 308 ILLRRLLVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATLHADL 367
ILLRRLL DR+L GVTH+ VDEIHERG+NEDFL++VLK+LL RR +L+L+LMSATL+A+L
Sbjct: 364 ILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAEL 423
Query: 368 FSSYFNGASIMKIPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQERIWKMNKQ-APR 426
FS+Y+ GA + IPGFT+PV+ HFLED+LE +GY+LT NQ+DDYGQE+ WK KQ PR
Sbjct: 424 FSNYYGGAPTIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQVDDYGQEKTWKTQKQLMPR 483
Query: 427 KRKSQIASAVEDALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENERPGAVL 486
KRK+QI + VE+AL ++F+ Y+ +TR+SLS W PDCIGFNLIE +LC+IC ERPGAVL
Sbjct: 484 KRKNQITTLVEEALSKSNFESYNSRTRDSLSSWMPDCIGFNLIEAVLCHICRKERPGAVL 543
Query: 487 VFMTGWDDISALKEKLLTHPVLGDPSQVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLAT 546
VF+TGWDDI +L +++ HP+LGDP++VLLL CHGSMA++EQRLIFE +RKIVLAT
Sbjct: 544 VFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNIRKIVLAT 603
Query: 547 NIAETSITINDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGEC 606
N+AE SITINDVVFV+DCGKAKE++YDALNNTPCLLP+WIS+ S +QR+GRAGR+ PGEC
Sbjct: 604 NMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRLFPGEC 663
Query: 607 YHLYPRCVYGAFAEYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAI 666
YHLYP+CVY AFAEYQLPE+LRTPL SLCLQIKSL++ SI+EFLS ALQ+PE LAVQNAI
Sbjct: 664 YHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQAPESLAVQNAI 723
Query: 667 EYLKIIGALDENENLTILGHYLTKFPMEPKLGKMLIFGAIFNCLDPILTIAAGLSVRDPF 726
+LK+IGALDE ENLT LG L+ P++PKLGKMLI GAIF C DPILTI +GLSVRDPF
Sbjct: 724 GFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTIVSGLSVRDPF 783
Query: 727 LTPLDKKDLAEAAKSQF-CHEYSDHLTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQSMKA 785
L P DKKDLA +AK +F +YSDH+ LVRA+EGWKDAE + + E+CW+NFLSAQ+++A
Sbjct: 784 LLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWKDAEREGSAYEFCWRNFLSAQTLQA 843
Query: 786 IDGLRIEFLSLLKDIGLVDSNTTSCNSWSYDMYLIRAAVCYGLYPGICSVVHNEKSFSLK 845
I LR +F +LK+ GLV + N S++ L+RA +C GL+PGI SVVH E S S K
Sbjct: 844 IHSLRKQFNYILKEAGLVHDDLALNNKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFK 903
Query: 846 TMEDGQVLLHSNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSISKG 905
TM+DGQV L++NSVN+R IPYPWLVF EK+KVN+V +RDST V DS ++LFGGS+S G
Sbjct: 904 TMDDGQVSLYANSVNSRFPTIPYPWLVFGEKVKVNAVLIRDSTGVPDSSLILFGGSLSTG 963
Query: 906 DTDGHLKMFGGYLEFFMKADVADMYLSIRRELDIFIQSKLLSPMMGIHSFHE-LLSAVRF 964
GHLKM GY++FFM ++A+ Y+ ++ ELD +Q KL P M IH + L+ AV+
Sbjct: 964 VQVGHLKMLDGYIDFFMDPNLAESYVKLKEELDKLLQKKLEDPSMDIHKEGKYLMLAVQE 1023
Query: 965 LISDNKGEGKFLFSCQLLGPSKPSTVSLPQALVSRTESGPGGDNSKSQLQTLLTRAGYDV 1024
L++ ++ EG+F+F PS+P + + G N KS LQTLL RAG+
Sbjct: 1024 LVAGDQCEGRFVFGRDTKRPSQPQ--------IGENKHSKDGTNPKSLLQTLLMRAGHSP 1075
Query: 1025 PLYKTIQLKNNQFQSTVEFQGVQLMGQPCXXXXXXXXXXXXXXXXWLMSRSQTGNEYTN 1083
P YKT LK N+F++ VEF+G+Q +G+P WL S N
Sbjct: 1076 PKYKTKHLKTNEFRALVEFKGMQFVGKPQRNKTLAEKDAAVEALAWLTHTSDNSTGQHN 1134
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/923 (47%), Positives = 613/923 (66%), Gaps = 19/923 (2%)
Query: 36 EWKHKLTMLLNDKSKQEEVSREKKDRRDFEQLAALAKIMGLYSHKY--GKVVVFSKVPLP 93
EW +K+ +QE + + R D + L+ +A MGLY H Y GK +V SKVPLP
Sbjct: 66 EWWNKIEQW-KTGGEQEMLIKRNFSRGDQQTLSDMALQMGLYFHAYNKGKALVVSKVPLP 124
Query: 94 NYRRDLDDKR--PLREVNLHSTVLRRVDAYLEDYKTKKSRMKKSFSELLSARPISSCGIG 151
+YR DLD++ +E+ + + R++ + L+ + S + + S+ G+
Sbjct: 125 DYRADLDERHGSTQKEIKMSTETERKLGSLLKTTQESGSSGASASAFNDQQDRTSTLGLK 184
Query: 152 TDEELYEQPELLISSKAVLETILWQKSLQMRDEQQAWQESPEGRRMLEFRCSLPAYKEKE 211
+ + P+ L K S +++ Q+ + + + + FR LPA+K KE
Sbjct: 185 RPDSASKLPDSLEKEKF---------SFALKERQEKLKATESVKALKAFREKLPAFKMKE 235
Query: 212 AILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVRGAVCNIICTQPRRISAISVSE 271
L+++S+NQVLV+SGETGCGKTTQLPQFILE EI S+RGA CNIICTQPRRISAISV+
Sbjct: 236 EFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVAS 295
Query: 272 RVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLVDRSLKGVTHIIVDEIH 331
R+++ERGE +GESVGY++RLE + T LLFCTTG+LLRRL+ D +L V+H++VDEIH
Sbjct: 296 RISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIH 355
Query: 332 ERGINEDFLLVVLKDLLARRRELKLILMSATLHADLFSSYFNGASIMKIPGFTYPVRTHF 391
ERG+NEDFLL++L+DLL RR +L+LILMSAT++AD+FS+YF + M IPGFT+PV F
Sbjct: 356 ERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELF 415
Query: 392 LEDILETSGYRLTPENQIDDYGQERIWKMNKQAPRKRKSQIASAVEDALRDADFKDYSLQ 451
LED+LE S Y + + + G R ++ +K + + ED ++ +K YS
Sbjct: 416 LEDVLEKSRYNIKSSDSGNYQGSSR---GRRRESESKKDDLTTLFEDIDINSHYKSYSSA 472
Query: 452 TRESLSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDDISALKEKLLTHPVLGDP 511
TR SL W+ I +L+E + +IC E GA+LVF+TGWD+IS L EK+ + LGD
Sbjct: 473 TRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDS 532
Query: 512 SQVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKESS 571
S+ L+L HGSM + QR IF+ P RKIVLATNIAE+SITI+DVV+V+DCGKAKE+S
Sbjct: 533 SKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETS 592
Query: 572 YDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRCVYGAFAEYQLPEILRTPL 631
YDALN CLLP+WISK S QR+GRAGRVQ G CY LYP+ +Y AF +YQLPEI+RTPL
Sbjct: 593 YDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPL 652
Query: 632 QSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYLTKF 691
Q LCL IKSL++GSI FL++ALQ P+ LAV+NAIE LK IGAL++ E LT LG +L
Sbjct: 653 QELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTL 712
Query: 692 PMEPKLGKMLIFGAIFNCLDPILTIAAGLSVRDPFLTPLDKKDLAEAAKSQFCHEY-SDH 750
P++P +GKML+ GAIF C++P LTIAA L+ R PF+ PL++K+ A+ AK F + SDH
Sbjct: 713 PVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDH 772
Query: 751 LTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQSMKAIDGLRIEFLSLLKDIGLVD-SNTTS 809
+ L++AYEG++DA+ +++CW+NFLS +++ ++ +R +FL LL DIG VD S +
Sbjct: 773 IALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNA 832
Query: 810 CNSWSYDMYLIRAAVCYGLYPGICSVVHNEKSFSLKTMEDGQVLLHSNSVNARETKIPYP 869
N +SYDM +I A +C GLYP + K + T E G+V +H SVNAR P
Sbjct: 833 YNQYSYDMEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPGSVNARVNLFSLP 892
Query: 870 WLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSISKGDTDGHLKMFGGYLEFFMKADVADM 929
+LV++EK+K SV++RDST +SD +L+FGG++ T ++M GGYL F ++ ++
Sbjct: 893 YLVYSEKVKTTSVYIRDSTNISDYALLMFGGNLIPSKTGEGIEMLGGYLHFSASKNILEL 952
Query: 930 YLSIRRELDIFIQSKLLSPMMGI 952
+R E+D + K+ P + I
Sbjct: 953 IQRLRGEVDKLLNKKIEDPSLDI 975
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 573 bits (1476), Expect = e-163, Method: Compositional matrix adjust.
Identities = 351/893 (39%), Positives = 515/893 (57%), Gaps = 91/893 (10%)
Query: 165 SSKAVLETILWQKSLQMRDEQQAWQESPEGRRMLEFRCSLPAYKEKEAILSAISRNQVLV 224
+++A ++ + + L ++ +Q+ + + + + ML+ R +LP + K IL + VLV
Sbjct: 575 NNRAKRDSYIEAECLSLQRKQENKKRTQKYKDMLKTRTALPISEVKNGILQHLKEKDVLV 634
Query: 225 ISGETGCGKTTQLPQFILESEIGSVRGAVCNIICTQPRRISAISVSERVASERGEK---L 281
+ GETG GKTTQ+PQFIL+ I S G CNIICTQPRRI+AISV++RVA ER E L
Sbjct: 635 VCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRIAAISVAQRVADERCESSPGL 694
Query: 282 GES-VGYKVRLEGMKGRDTHLLFCTTGILLRRLLVDRSLKGVTHIIVDEIHERGINEDFL 340
+S VGY+VRLE + T LLFCTTGILLR+L DR+L VTHIIVDE+HER + DFL
Sbjct: 695 DDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFL 754
Query: 341 LVVLKDLLARR------RELKLILMSATLHADLFSSYFNGASIMKIPGFTYPVRTHFLED 394
L++LK L+ ++ R+LK+ILMSAT+ ADLFS YF ++ G T+PV THFLE+
Sbjct: 755 LIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGHCPVITAQGRTHPVTTHFLEE 814
Query: 395 ILETSGYRLTPEN----QIDDYGQERIWKMNKQAPRKRKSQIASA-------VEDALR-- 441
I E+ Y L P++ + D ++++ +N + R +K+ + + ED L
Sbjct: 815 IYESINYLLAPDSPAALRSDTSIKDKLGSVNDR--RGKKNLVLAGWGDDYLLSEDCLNPF 872
Query: 442 --DADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDDISALK 499
+++ YS QT+++L N D I + L+E ++C+I + GA+L+F+ G +I L
Sbjct: 873 YVSSNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLL 932
Query: 500 EKLLTHPVLGDPSQVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVV 559
+ L P+ LL H S+ASSEQR +F P G+RK++ ATNIAETSITI+DVV
Sbjct: 933 DMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVV 992
Query: 560 FVLDCGKAKESSYDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRCVYGAFA 619
+V+D GK KE+ Y+ ++ WIS+ + +QR GRAGRV+PG C+ LY R +
Sbjct: 993 YVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLM 1052
Query: 620 E-YQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDEN 678
YQ+PE+LR PL LCLQIK L LG I FLSRAL+ P A+ +AI L +GA++ +
Sbjct: 1053 RPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGD 1112
Query: 679 ENLTILGHYLTKFPMEPKLGKMLIFGAIFNCLDPILTIAAGLSVRDPFLTPLDKKDLAEA 738
E LT LGH+L K P++ +GKML++G IF CL PIL+IAA LS + PF+ P D+K +
Sbjct: 1113 EELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDR 1172
Query: 739 AKSQFCHE-------------YSDHLTLVRAYEGWKDAEIDQ-----AGQEYCWKNFLSA 780
K + SDHL ++ AY+ W +I Q A Q +C FLS+
Sbjct: 1173 VKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKW--VKILQERGMKAAQRFCESKFLSS 1230
Query: 781 QSMKAIDGLRIEFLSLLKDIGLVDSNTT---------SCNSW------SYDMY-----LI 820
M+ I +R++F +LL DIGL++ T + + W ++MY ++
Sbjct: 1231 SVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKENLDVWFSDPTQPFNMYSQQPEVV 1290
Query: 821 RAAVCYGLYPGICSVVHNEKSFSLKTME----------------DG--QVLLHSNSVNAR 862
+A +C GLYP I + N+K + T DG +V +H +S+N+
Sbjct: 1291 KAILCAGLYPNIAA---NDKGITETTFNSLTKQGNQTKSYSAWYDGRREVHIHPSSINSN 1347
Query: 863 ETKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSISKGDTDGHLKMFGGYLEFFM 922
P+LVF EK++ N V+LRD+T VS +LLFGGSI+ G + + G+L+
Sbjct: 1348 FKAFQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFGGSINVHHQSGSVTI-DGWLKVAA 1406
Query: 923 KADVADMYLSIRRELDIFIQSKLLSP-MMGIHSFHELLSAVRFLISDNKGEGK 974
A A ++ +R L ++ + P GI + S V LI + K + K
Sbjct: 1407 PAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSMVHLLIEEGKPQHK 1459
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 514 bits (1324), Expect = e-145, Method: Compositional matrix adjust.
Identities = 323/849 (38%), Positives = 476/849 (56%), Gaps = 68/849 (8%)
Query: 181 MRDEQQAWQESPEGRRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQF 240
++ +Q+ ++ + + ML+ R +LP + K+ IL + VLV+ GETG GKTTQ+PQF
Sbjct: 574 LKQKQENKKKMQKYKDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQF 633
Query: 241 ILESEIGSVRGAVCNIICTQPRRISAISVSERVASERGEKL----GESVGYKVRLEGMKG 296
IL+ I S G CNIICTQPR AI+V++RVA ER E V Y+VR + +
Sbjct: 634 ILDDMIDSGHGGYCNIICTQPR---AITVAQRVADERCEPPPGFDNSVVAYQVRHQNARS 690
Query: 297 RDTHLLFCTTGILLRRLLVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRR---- 352
T LLFCTTGILLR+L+ D +LK VTHIIVDE+HER + DFLL++LK L+ ++
Sbjct: 691 DKTRLLFCTTGILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNA 750
Query: 353 --ELKLILMSATLHADLFSSYFNGASIMKIPGFTYPVRTHFLEDILETSGYRLTPENQI- 409
+LK+ILMSAT+ A FS YF I+ G T+PV T+FLEDI E + Y L ++
Sbjct: 751 LPKLKVILMSATVDAHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAA 810
Query: 410 ---DDYGQERIWKMNKQAPRKRKSQIASAVEDALRDADFKDYSLQTR-ESLSCWNPDCIG 465
D +++ +N PR +K+ + + D+ + SL T +S+ +
Sbjct: 811 LSSDTSITDKLGSVN--VPRGKKNLMLAGWGDSYL---VSEDSLNTSYDSIKYIASAVVD 865
Query: 466 FNLIEYILCNICENERPGAVLVFMTGWDDISALKEKLLTHPVLGDPSQVLLLTCHGSMAS 525
++L+E ++C+I + GA+LVF+ G +I+ L +L S LL H S+AS
Sbjct: 866 YDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIAS 925
Query: 526 SEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKESSYDALNNTPCLLPTW 585
+EQ+ +F P G+RK+++ATNIAETSITI DVV+V+D GK KE+ Y+ ++ W
Sbjct: 926 TEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDW 985
Query: 586 ISKVSVQQRKGRAGRVQPGECYHLYPRCVYGAFAE-YQLPEILRTPLQSLCLQIKSLKLG 644
+SK + +QR GRAGRV+PG C+ LY R + YQ+PE+LR PL LCL IK L LG
Sbjct: 986 VSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLG 1045
Query: 645 SISEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYLTKFPMEPKLGKMLIFG 704
I FLS+AL+ P A+ +AI L +GAL+ +E LT LGH+L K P++ +GKML++G
Sbjct: 1046 QIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYG 1105
Query: 705 AIFNCLDPILTIAAGLS-VRDPFLTPLDKKD------------LAEAAKSQFCHEYSDHL 751
IF CL PIL+IAA LS + PF+ D+++ L ++ SDHL
Sbjct: 1106 GIFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHL 1165
Query: 752 TLVRAYEGWKDAEIDQ---AGQEYCWKNFLSAQSMKAIDGLRIEFLSLLKDIGLVD---- 804
+V AYE W +Q A + +C FL++ M+ + R+EF LL DIGL++
Sbjct: 1166 LMVVAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIGLINLPKG 1225
Query: 805 -------------SNTTSCNSWSYDMYLIRAAVCYGLYPGICSVVHN------EKSFSLK 845
T N +S + +++A +C GL P I + N E++
Sbjct: 1226 KGRRKENFDVWFSDKTQPFNMYSQEPEVVKAILCAGLCPNIAEGLVNRLTKPAEETQRYA 1285
Query: 846 TMEDG--QVLLHSNSVNARETKIPYPWLVFNEKIKVNS-VFLRDSTAVSDSVVLLFGGSI 902
DG +V +H NS+N YP++VF EK++ V+L+D+T VS +LLFGGSI
Sbjct: 1286 VWHDGKREVHIHRNSINKNCKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLFGGSI 1345
Query: 903 SKGDTDGHLKMFGGYLEFFMKADVADMYLSIRRELDIFIQSKLLSP-MMGIHSFHELLSA 961
+ G + + G+L+ A A ++ +R L ++ + P GI + S
Sbjct: 1346 NVHHQSGSVTI-DGWLKLTAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKSM 1404
Query: 962 VRFLISDNK 970
V LI + K
Sbjct: 1405 VHLLIEEGK 1413
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 357 bits (915), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 248/724 (34%), Positives = 382/724 (52%), Gaps = 106/724 (14%)
Query: 188 WQESPEGRR---MLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILES 244
W P +R +LE R +LP + +KE L ++ NQ L++ GETG GKTTQ+PQF++++
Sbjct: 42 WNGKPYSQRYYDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDA 101
Query: 245 ---EIGSVRGAVCNIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHL 301
E R + CTQPRR++A+SVS RVA E +GE VGY +R E T L
Sbjct: 102 VDAETSDKRRKWL-VGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVL 160
Query: 302 LFCTTGILLRRLLVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSA 361
+ T G+LLR + D L+ II+DE HER + D L +LK++L R +LKL++MSA
Sbjct: 161 KYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSA 220
Query: 362 TLHADLFSSYFNGASIMKIPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQERIWKMN 421
TL A+ F YF+GA +MK+PG R H +E Y PE DY
Sbjct: 221 TLEAEKFQDYFSGAPLMKVPG-----RLHPVEIF-----YTQEPER---DY--------- 258
Query: 422 KQAPRKRKSQIASAVEDALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENER 481
+E A+R +++ +C E
Sbjct: 259 --------------LEAAIR-------------------------TVVQIHMC-----EP 274
Query: 482 PGAVLVFMTGWDDISALKEKLLTH-PVLGD---PSQVLLLTCHGSMASSEQRLIFEEPED 537
PG +LVF+TG ++I K+ LGD P +V+ L + ++ + Q+ IF+ +
Sbjct: 275 PGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPL--YSTLPPAMQQKIFDPAPE 332
Query: 538 GV-------RKIVLATNIAETSITINDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVS 590
V RKIV++TNIAETS+TI+ +V+V+D G AK+ Y+ LL + ISK S
Sbjct: 333 PVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKAS 392
Query: 591 VQQRKGRAGRVQPGECYHLYPRCVYGAFAEYQ-LPEILRTPLQSLCLQIKSLKLGSISEF 649
QR GRAGR +PG+C+ LY + + Q PEILR+ L + L +K L + + F
Sbjct: 393 AHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 452
Query: 650 LSRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYLTKFPMEPKLGKMLIFGAIFNC 709
+PE L A+E L +GALD++ NLT G +++FP++P++ KMLI FNC
Sbjct: 453 DFMDPPAPETL--MRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNC 510
Query: 710 LDPILTIAAGLSVRDPFLTPLDKKDLAEAAKSQFCHEYSDHLTLVRAYEGWKDAEIDQAG 769
+ IL+++A LSV + F+ P + + A+ AK++F H DHLTL+ Y +K D
Sbjct: 511 SNEILSVSAMLSVPNCFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNED--- 567
Query: 770 QEYCWKNFLSAQSMKAIDGLRIEFLSLLKDIGLVDSNTTSCNSWSYDMYL-IRAAVCYGL 828
+C++NF++ ++MK+ D +R + + ++ L S + S D Y+ IR A+ G
Sbjct: 568 PNWCYENFINNRAMKSADNVRQQLVRIMSRFNL---KMCSTDFNSRDYYINIRKAMLAGY 624
Query: 829 YPGICSVVHNEKSFSLKTMEDGQVL-LH-SNSVNARETKIPYPWLVFNEKIKVNSVFLRD 886
+ V H E++ T++D QV+ LH SN ++ + W+++NE + + F+R
Sbjct: 625 F---MQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPE-----WVIYNEYVLTSRNFIRT 676
Query: 887 STAV 890
T +
Sbjct: 677 VTDI 680
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 351 bits (901), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 244/711 (34%), Positives = 376/711 (52%), Gaps = 101/711 (14%)
Query: 197 MLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIG--SVRGAVC 254
+LE R LP + +K+ L+ ++ NQ L++ GETG GKTTQ+PQF+L++ + S +G
Sbjct: 58 ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKW 117
Query: 255 NIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLL 314
+ CTQPRR++A+SVS RVA E +GE VGY +R E T L + T G+LLR +
Sbjct: 118 LVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAM 177
Query: 315 VDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATLHADLFSSYFNG 374
D L+ II+DE HER + D L +LK++L R +LKL++MSATL A+ F YF+G
Sbjct: 178 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSG 237
Query: 375 ASIMKIPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQERIWKMNKQAPRKRKSQIAS 434
A +MK+ P R H +E Y PE DY
Sbjct: 238 APLMKV-----PGRLHPVEIF-----YTQEPER---DY---------------------- 262
Query: 435 AVEDALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDD 494
+E A+R +++ +C E PG +LVF+TG ++
Sbjct: 263 -LEAAIR-------------------------TVVQIHMC-----EPPGDILVFLTGEEE 291
Query: 495 ISALKEKLLTH-PVLGD---PSQVLLLTCHGSMASSEQRLIFE-------EPEDGVRKIV 543
I K+ LGD P +V+ L + ++ + Q+ IF+ E RKIV
Sbjct: 292 IEDACRKINKEVSNLGDQVGPVKVVPL--YSTLPPAMQQKIFDPAPVPLTEGGPAGRKIV 349
Query: 544 LATNIAETSITINDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSVQQRKGRAGRVQP 603
++TNIAETS+TI+ +V+V+D G AK+ Y+ LL + ISK S QR GRAGR +P
Sbjct: 350 VSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRP 409
Query: 604 GECYHLYPRCVYGAFAEYQ-LPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEILAV 662
G+C+ LY + + Q PEILR+ L + L +K L + + F +PE L
Sbjct: 410 GKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETL-- 467
Query: 663 QNAIEYLKIIGALDENENLTILGHYLTKFPMEPKLGKMLIFGAIFNCLDPILTIAAGLSV 722
A+E L +GALD+ NLT G +++FP++P++ KMLI FNC + IL+++A LSV
Sbjct: 468 MRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSV 527
Query: 723 RDPFLTPLDKKDLAEAAKSQFCHEYSDHLTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQS 782
+ F+ P + + A+ AK++F H DHLTL+ Y +K D +C++NF++ ++
Sbjct: 528 PNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED---PNWCFENFVNNRA 584
Query: 783 MKAIDGLRIEFLSLLKDIGLVDSNTTSCNSWSYDMYL-IRAAVCYGLYPGICSVVHNEKS 841
MK+ D +R + + ++ L S + S D Y+ IR A+ G + V H E++
Sbjct: 585 MKSADNVRQQLVRIMSRFNL---KMCSTDFNSRDYYVNIRKAMLAGYF---MQVAHLERT 638
Query: 842 FSLKTMEDGQVL-LH-SNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAV 890
T++D QV+ LH SN ++ + W+++NE + F+R T +
Sbjct: 639 GHYLTVKDNQVVHLHPSNCLDHKPE-----WVIYNEYVLTTRNFIRTVTDI 684
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 345 bits (886), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 236/722 (32%), Positives = 368/722 (50%), Gaps = 97/722 (13%)
Query: 175 WQKSLQMRDEQQAWQESPEGRRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKT 234
++ ++ + + Q E + E R SLP Y ++ +L A+ +QVLVI G+TG GKT
Sbjct: 365 YEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKT 424
Query: 235 TQLPQFILESEIGSVRGAVCNIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGM 294
TQ+PQ++ E+ + RG V CTQPRR++A+SV+ RVA E G KLG VGY +R E
Sbjct: 425 TQIPQYLHEAGY-TKRGKVG---CTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDC 480
Query: 295 KGRDTHLLFCTTGILLRRLLVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRREL 354
T L + T G+LLR LL + L + +IVDE HER ++ D L ++KD+ R +L
Sbjct: 481 TSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDL 540
Query: 355 KLILMSATLHADLFSSYFNGASIMKIPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQ 414
KL++ SAT+ A+ FS YF+ A I PG YPV + Y PE
Sbjct: 541 KLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEIN----------YTSAPE-------- 582
Query: 415 ERIWKMNKQAPRKRKSQIASAVEDALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILC 474
AD+ D ++ T +
Sbjct: 583 ----------------------------ADYMDAAIVT--------------------IL 594
Query: 475 NICENERPGAVLVFMTGWDDISALKEKLLTHPVLGDPSQVL-LLTC--HGSMASSEQRLI 531
I E G +LVF TG ++I +E +L H + G +++ L+ C + ++ S Q I
Sbjct: 595 TIHVREPLGDILVFFTGQEEIETAEE-ILKHRIRGLGTKIRELIICPIYANLPSELQAKI 653
Query: 532 FEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSV 591
FE +G RK+VLATNIAETS+TI+ + +V+D G +K SY+ LL T ISK S
Sbjct: 654 FEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASA 713
Query: 592 QQRKGRAGRVQPGECYHLYPRCVYGA-FAEYQLPEILRTPLQSLCLQIKSLKLGSISEFL 650
QR GRAGR PG+CY LY Y E +PE+ RT L S+ L +KSL + + F
Sbjct: 714 TQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINF- 772
Query: 651 SRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYLTKFPMEPKLGKMLIFGAIFNCL 710
+ P A+ ++E L +GAL++ LT G + +FP++P L KM++ + C
Sbjct: 773 -DFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCS 831
Query: 711 DPILTIAAGLSVRDP-FLTPLDKKDLAEAAKSQF-CHEYSDHLTLVRAYEGWKDAEIDQA 768
D I++IAA LS+ F P DK+ A+ A+ F DH+ L++ Y WK+
Sbjct: 832 DEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNF--- 888
Query: 769 GQEYCWKNFLSAQSMKAIDGLRIEFLSLLKDIGL-VDSNTTSCNSWSYDMYLIRAAVCYG 827
++C++N++ +SMK +R + LL+ + + + SN +S +R ++ G
Sbjct: 889 STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDS-------VRKSIVAG 941
Query: 828 LYPGICSVVHNEKSFSLKTMEDGQ-VLLHSNSVNARETKIPYPWLVFNEKIKVNSVFLRD 886
+P + +K+ S +T++ Q V +H NS +++ W+V++E + + ++R
Sbjct: 942 FFPHTAKL---QKNGSYRTVKHPQTVHIHPNSGL---SQVLPRWVVYHELVLTSKEYMRQ 995
Query: 887 ST 888
T
Sbjct: 996 VT 997
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 345 bits (886), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 236/722 (32%), Positives = 368/722 (50%), Gaps = 97/722 (13%)
Query: 175 WQKSLQMRDEQQAWQESPEGRRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKT 234
++ ++ + + Q E + E R SLP Y ++ +L A+ +QVLVI G+TG GKT
Sbjct: 375 YEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKT 434
Query: 235 TQLPQFILESEIGSVRGAVCNIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGM 294
TQ+PQ++ E+ + RG V CTQPRR++A+SV+ RVA E G KLG VGY +R E
Sbjct: 435 TQIPQYLHEAGY-TKRGKVG---CTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDC 490
Query: 295 KGRDTHLLFCTTGILLRRLLVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRREL 354
T L + T G+LLR LL + L + +IVDE HER ++ D L ++KD+ R +L
Sbjct: 491 TSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDL 550
Query: 355 KLILMSATLHADLFSSYFNGASIMKIPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQ 414
KL++ SAT+ A+ FS YF+ A I PG YPV + Y PE
Sbjct: 551 KLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEIN----------YTSAPE-------- 592
Query: 415 ERIWKMNKQAPRKRKSQIASAVEDALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILC 474
AD+ D ++ T +
Sbjct: 593 ----------------------------ADYMDAAIVT--------------------IL 604
Query: 475 NICENERPGAVLVFMTGWDDISALKEKLLTHPVLGDPSQVL-LLTC--HGSMASSEQRLI 531
I E G +LVF TG ++I +E +L H + G +++ L+ C + ++ S Q I
Sbjct: 605 TIHVREPLGDILVFFTGQEEIETAEE-ILKHRIRGLGTKIRELIICPIYANLPSELQAKI 663
Query: 532 FEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSV 591
FE +G RK+VLATNIAETS+TI+ + +V+D G +K SY+ LL T ISK S
Sbjct: 664 FEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASA 723
Query: 592 QQRKGRAGRVQPGECYHLYPRCVYGA-FAEYQLPEILRTPLQSLCLQIKSLKLGSISEFL 650
QR GRAGR PG+CY LY Y E +PE+ RT L S+ L +KSL + + F
Sbjct: 724 TQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINF- 782
Query: 651 SRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYLTKFPMEPKLGKMLIFGAIFNCL 710
+ P A+ ++E L +GAL++ LT G + +FP++P L KM++ + C
Sbjct: 783 -DFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCS 841
Query: 711 DPILTIAAGLSVRDP-FLTPLDKKDLAEAAKSQF-CHEYSDHLTLVRAYEGWKDAEIDQA 768
D I++IAA LS+ F P DK+ A+ A+ F DH+ L++ Y WK+
Sbjct: 842 DEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNF--- 898
Query: 769 GQEYCWKNFLSAQSMKAIDGLRIEFLSLLKDIGL-VDSNTTSCNSWSYDMYLIRAAVCYG 827
++C++N++ +SMK +R + LL+ + + + SN +S +R ++ G
Sbjct: 899 STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDS-------VRKSIVAG 951
Query: 828 LYPGICSVVHNEKSFSLKTMEDGQ-VLLHSNSVNARETKIPYPWLVFNEKIKVNSVFLRD 886
+P + +K+ S +T++ Q V +H NS +++ W+V++E + + ++R
Sbjct: 952 FFPHTAKL---QKNGSYRTVKHPQTVHIHPNSGL---SQVLPRWVVYHELVLTSKEYMRQ 1005
Query: 887 ST 888
T
Sbjct: 1006 VT 1007
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 338 bits (868), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 232/697 (33%), Positives = 361/697 (51%), Gaps = 95/697 (13%)
Query: 199 EFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVRGAVCNIIC 258
E R +LP Y ++ +L+A+ +QVL+I GETG GKTTQ+PQ++ E+ G + + + C
Sbjct: 399 EDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEA--GYTK--LGKVGC 454
Query: 259 TQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLVDRS 318
TQPRR++A+SV+ RVA E G KLG VGY +R E T L + T G+LLR LL +
Sbjct: 455 TQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPD 514
Query: 319 LKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATLHADLFSSYFNGASIM 378
L + IIVDE HER + D L ++KD+ R +LKL++ SAT+ A+ FS +F+ A I
Sbjct: 515 LGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIF 574
Query: 379 KIPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQERIWKMNKQAPRKRKSQIASAVED 438
+ PG YPV DI T+ AP
Sbjct: 575 RFPGRRYPV------DICFTT------------------------AP------------- 591
Query: 439 ALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDDISAL 498
+AD+ D ++ T + I E G VLVF+ G ++I A+
Sbjct: 592 ---EADYMDAAITT--------------------VLTIHVKEPLGDVLVFLPGQEEIEAV 628
Query: 499 KEKLLTHPVLGDPSQVL-LLTC--HGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITI 555
+E L H + G +++ L+ C + ++ S Q IFE +G RK+VLATNIAETS+TI
Sbjct: 629 EENL-KHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTI 687
Query: 556 NDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRC-V 614
+ + +V+D G +K SY+ LL T ISK S QR GRAGR PG+CY LY
Sbjct: 688 DGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNY 747
Query: 615 YGAFAEYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKIIGA 674
Y + +PEI RT L S+ L +KSL + ++ F + P A+ ++E L +GA
Sbjct: 748 YNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNF--DFMDPPPSEALIKSLELLFALGA 805
Query: 675 LDENENLTILGHYLTKFPMEPKLGKMLIFGAIFNCLDPILTIAAGLSVRDP-FLTPLDKK 733
L++ LT G + +FP++P L KM++ + C D I++IAA LS+ F P DK+
Sbjct: 806 LNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQ 865
Query: 734 DLAEAAKSQF-CHEYSDHLTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQSMKAIDGLRIE 792
A+ A F DH+ ++ Y WK+ ++C++N++ +SMK +R +
Sbjct: 866 VHADNAMKNFHVGNVGDHIAFLKIYNSWKETNY---STQWCYENYIQVRSMKRARDIRDQ 922
Query: 793 FLSLLKDIGL-VDSNTTSCNSWSYDMYLIRAAVCYGLYPGICSVVHNEKSFSLKTMEDGQ 851
LL+ + + V SN +S IR ++ G +P + +K+ S +T++ Q
Sbjct: 923 LEGLLERVEIDVSSNANELDS-------IRKSIVAGFFPHTAKL---QKNGSYRTVKHPQ 972
Query: 852 VLLHSNSVNARETKIPYPWLVFNEKIKVNSVFLRDST 888
+H + + +P W+V+++ + + ++R T
Sbjct: 973 T-VHIHPASGLSQVLPR-WVVYHQLVLTSKEYMRQVT 1007
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 334 bits (857), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 229/713 (32%), Positives = 363/713 (50%), Gaps = 92/713 (12%)
Query: 126 KTKKSRMKKSFSELLSARPISSCGIGTDEELYEQPELLISSKAVLETILWQKSLQMRDEQ 185
K ++ ++ F EL + + GI E + ++ ++ K Q +
Sbjct: 480 KQSANKSRQRFWELAGSNLGNILGIEKSAEQIDADTAVVGDDGEVDFKGEAKFAQHMKKG 539
Query: 186 QAWQESPEGRRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESE 245
+A E + M E R LP + ++ +L I NQV+V+ GETG GKTTQL Q++ E
Sbjct: 540 EAVSEFAMSKTMAEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHED- 598
Query: 246 IGSVRGAVCNII--CTQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLF 303
G N I CTQPRR++A+SV++RV+ E +LG+ +GY +R E + G +T + +
Sbjct: 599 -----GYTINGIVGCTQPRRVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKY 653
Query: 304 CTTGILLRRLLVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATL 363
T G+LLR L D L +++DE HER +N D L +LK ++ARRR+ KLI+ SATL
Sbjct: 654 MTDGVLLRETLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATL 713
Query: 364 HADLFSSYFNGASIMKIPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQERIWKMNKQ 423
+A FS++F +P F P RT F +IL Y TP +DY
Sbjct: 714 NAQKFSNFFGS-----VPIFNIPGRT-FPVNIL----YSKTP---CEDY----------- 749
Query: 424 APRKRKSQIASAVEDALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENERPG 483
+ +AV+ A+ ++ +P PG
Sbjct: 750 --------VEAAVKQAM--------------TIHITSP--------------------PG 767
Query: 484 AVLVFMTGWDDISA----LKEKL--LTHPVLGDPSQVLLLTCHGSMASSEQRLIFEEPED 537
+L+FMTG D+I A LKE++ L + + +L+L + + + Q IF++PED
Sbjct: 768 DILIFMTGQDEIEAACFSLKERMEQLVSSSSREITNLLILPIYSQLPADLQAKIFQKPED 827
Query: 538 GVRKIVLATNIAETSITINDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSVQQRKGR 597
G RK ++ATNIAETS+T++ + +V+D G K ++ L IS+ + QR GR
Sbjct: 828 GARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGR 887
Query: 598 AGRVQPGECYHLYPRCVY-GAFAEYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQS 656
AGR PG CY LY Y +PEI RT L ++ L +KSLK+ ++ +F +
Sbjct: 888 AGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDF--DFMDP 945
Query: 657 PEILAVQNAIEYLKIIGALDENENLTILGHYLTKFPMEPKLGKMLIFGAIFNCLDPILTI 716
P + N++ L ++GAL+ LT LG + +FP++P L KML+ G +C+D +LTI
Sbjct: 946 PPQENILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLTI 1005
Query: 717 AAGLSVRDPFLTPLDKKDLAEAAKSQFCHEYSDHLTLVRAYEGWKDAEIDQAGQEYCWKN 776
+ LSV F P ++ + ++AA+ +F SDHLTL+ Y+ WK E D G ++C +
Sbjct: 1006 VSMLSVPSVFFRPKERAEESDAAREKFFVPESDHLTLLNVYQQWK--EHDYRG-DWCNDH 1062
Query: 777 FLSAQSMKAIDGLRIEFLSLLKDIGLVDSNTTSCNSWSYDMYLIRAAVCYGLY 829
+L + ++ +R + L +LK + + SC D ++R A+C +
Sbjct: 1063 YLQVKGLRKAREVRSQLLDILKQLKI---ELRSCGP---DWDIVRKAICSAYF 1109
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 323 bits (829), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/464 (36%), Positives = 266/464 (57%), Gaps = 12/464 (2%)
Query: 456 LSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDDISALKEKLLTHPVLGDPSQVL 515
++ NP+ + +LI+ ++ IC + GA+LVF+ GWDDI+ +++LL +P D ++
Sbjct: 525 MATINPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFD 584
Query: 516 LLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKESSYDAL 575
++ H + + EQ+ +F P G RKIVLATNIAE+++TI+DVV+V+D G+ KE SYD
Sbjct: 585 IICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPY 644
Query: 576 NNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRCVYGAFAEYQLPEILRTPLQSLC 635
NN L +W+SK + +QR+GRAGR QPG CYHLY R + ++++PEI R P++ LC
Sbjct: 645 NNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELC 704
Query: 636 LQIKSLKLG-SISEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYLTKFPME 694
LQ+K L ++FL + L P ++ NA+ L+ IGAL E LT LG P+
Sbjct: 705 LQVKILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVH 764
Query: 695 PKLGKMLIFGAIFNCLDPILTIAAGLSVRDPFLTPLDKKD-----LAEAAKSQFCHEYSD 749
P + KML F + NCLDP LT+A ++PF P+ + A+ + C SD
Sbjct: 765 PLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSD 824
Query: 750 HLTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQSMKAIDGLRIEFLSLLKDIGLVDSNTTS 809
HL +V A+E WK+A+ E+C + F+S +MK +D +R + S LK G++ ++ +S
Sbjct: 825 HLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISS 884
Query: 810 CNSWSYDMYLIRAAVCYGLYPGI---CSVVHNEKSFSLKTMEDGQVLLH--SNSVNARET 864
C+ S D ++RA + GLYP + C N + ++T +V +H SN+ N
Sbjct: 885 CSQNSRDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSK 944
Query: 865 KIPYPWLVFNEKIKVN-SVFLRDSTAVSDSVVLLFGGSISKGDT 907
K LVF+E + + + +R+ T D +LL I+ T
Sbjct: 945 KYDESLLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIAVAPT 988
Score = 239 bits (611), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 124/246 (50%), Positives = 170/246 (69%), Gaps = 14/246 (5%)
Query: 154 EELYEQPELLISSKAVLETILWQKSLQMRDEQQAWQESPEGRRMLEFRCSLPAYKEKEAI 213
++ + +P+ ISS+ +LE + S +D +A +E + + R LP K+AI
Sbjct: 147 DDFFRKPQ--ISSEEILEKVASLSSRLKKD--KALKE------ITKLRSKLPITSFKDAI 196
Query: 214 LSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVRGAVCNIICTQPRRISAISVSERV 273
SA+ NQV++ISGETGCGKTTQ+PQ++L+ S R C I+CTQPRRISA+SVSER+
Sbjct: 197 TSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKR-ETCKIVCTQPRRISAMSVSERI 255
Query: 274 ASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLVDRSLKGV---THIIVDEI 330
+ ERGE +GE++GYKVRL+ GR + ++FCT GILLR L+ S+ V THIIVDEI
Sbjct: 256 SCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVSDITHIIVDEI 315
Query: 331 HERGINEDFLLVVLKDLLARRRELKLILMSATLHADLFSSYFNGASIMKIPGFTYPVRTH 390
HER DF+L +++DLL L+LILMSATL A+ FS YF G ++++PGFTYPVRT
Sbjct: 316 HERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFTYPVRTL 375
Query: 391 FLEDIL 396
+LED+L
Sbjct: 376 YLEDVL 381
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 317 bits (812), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 269/467 (57%), Gaps = 12/467 (2%)
Query: 456 LSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDDISALKEKLLTHPVLGDPSQVL 515
++ P+ + LI ++ IC + + GA+LVF+ GW++IS KEKLL ++ +
Sbjct: 549 MATIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFI 608
Query: 516 LLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKESSYDAL 575
+L H + + EQ+ +F P G RKIVLATNIAE+++TI+DVV+V+D G+ KE SYD
Sbjct: 609 ILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPY 668
Query: 576 NNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRCVYGAFAEYQLPEILRTPLQSLC 635
N+ L +W+SK + +QR GRAGR Q G CYHLY + + EY++PE++R P+ LC
Sbjct: 669 NDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELC 728
Query: 636 LQIKSLKLG-SISEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYLTKFPME 694
LQ+K L ++++FL + + P +++NA+ LK IGAL E LT LG + P+
Sbjct: 729 LQVKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVH 788
Query: 695 PKLGKMLIFGAIFNCLDPILTIAAGLSVRDPFLTPLDKKDL--AEAAKSQFCH---EYSD 749
P++ KM+ F + NCLDP L +A +DPF PL D A AAK + ++SD
Sbjct: 789 PRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSD 848
Query: 750 HLTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQSMKAIDGLRIEFLSLLKDIGLVDSNTTS 809
HL V A++ WK+A+ +E+C K F+S MK +D L + L G++ S++++
Sbjct: 849 HLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSN 908
Query: 810 CNSWSYDMYLIRAAVCYGLYP---GICSVVHNEKSFSLKTMEDGQVLLH--SNSVNARET 864
C+ ++D ++RA + GLYP +C + N ++T+ +V + SN+V+ T
Sbjct: 909 CSLNAHDPGILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRVPSLSNNVDMSST 968
Query: 865 KIPYPWLVFNEKIKVN-SVFLRDSTAVSDSVVLLFGGSISKGDTDGH 910
K +VF+E + + V +R T + VLLF I+ T+ +
Sbjct: 969 KFDEALIVFDEITRGDWGVVIRSCTVLPTIPVLLFSREIAVSTTESY 1015
Score = 240 bits (612), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 154/205 (75%), Gaps = 4/205 (1%)
Query: 195 RRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVRGAVC 254
R + E R LP ++AI+SA+ NQV++I+GETGCGKTTQ+PQ++L+ S + A C
Sbjct: 208 REIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEA-C 266
Query: 255 NIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLL 314
IICTQPRRISAISVS+R++ ERGE +G +VGYKVRL+ GR++ ++FCT GILLR L+
Sbjct: 267 KIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLI 326
Query: 315 ---VDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATLHADLFSSY 371
V+ S+ +THIIVDEIHER DF+L++L+DLL L+LILMSATL A+ FS Y
Sbjct: 327 GKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEY 386
Query: 372 FNGASIMKIPGFTYPVRTHFLEDIL 396
F G ++++PGFTYPVRT FL+D L
Sbjct: 387 FGGCPVVRVPGFTYPVRTFFLDDAL 411
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 313 bits (802), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 224/699 (32%), Positives = 351/699 (50%), Gaps = 73/699 (10%)
Query: 201 RCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVRGAVCNIICTQ 260
R LP YK + IL + + +I GETG GKTTQ+PQ++ E+ G G I CTQ
Sbjct: 45 RQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEA--GWAEGGRV-IACTQ 101
Query: 261 PRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRD-THLLFCTTGILLRRLLVDRSL 319
PRR++ +VS RVA E G LGE VGY +R E T + F T G+L+R ++ D L
Sbjct: 102 PRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLL 161
Query: 320 KGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATLHADLFSSYFNGASIMK 379
+ I++DE HER I+ D LL +LK + RR EL+LI+ SAT+ A S++FN +
Sbjct: 162 TKYSVIMIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRH 221
Query: 380 IPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQERIWKMNKQAPRKRKSQIASAVEDA 439
P + P G +L P I + + + + V D
Sbjct: 222 APEGSTP-------------GPKLEPA----------ILSVEGRGFSVKIHYVEEPVSDY 258
Query: 440 LRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDDISALK 499
+R +++ IL I E E PG VLVF+TG +DI
Sbjct: 259 IR-------------------------SVVSTILL-INEREPPGDVLVFLTGQEDIETAI 292
Query: 500 EKLL---THPVLGDPSQVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITIN 556
KLL H + S +L L + ++ SEQ LIF G RK++L+TNIAETS+T+
Sbjct: 293 -KLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLE 351
Query: 557 DVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRCVY- 615
VV+V+D G +K+ Y+ +++ L+ ISK S +QR GRAGRV+PG+CY LY +
Sbjct: 352 GVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDYFL 411
Query: 616 GAFAEYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKIIGAL 675
+PE+ R+ L S +Q+K+L + +I F A S E A+ A+E L + L
Sbjct: 412 NQMPGEGIPEMQRSNLVSTVIQLKALGIDNILGFDWPAPPSSE--AMIRALEVLYSLQIL 469
Query: 676 DENENLTI-LGHYLTKFPMEPKLGKMLIFGAIFNCLDPILTIAAGLSVRDPFLTPLDKKD 734
D++ LT G + + P++P + KM++ + C I+TIAA LSV+ ++ +
Sbjct: 470 DDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLSVQSVWIIARGVQK 529
Query: 735 LAEAAKSQFCHEYSDHLTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQSMKAIDGLRIEFL 794
+ AK +F DH+T + Y+G+ ++ + ++C+KNFL+ QSMK + +R +
Sbjct: 530 EQDEAKLRFAAAEGDHVTFLNVYKGFLES---KKPTQWCYKNFLNYQSMKKVVEIRDQLK 586
Query: 795 SLLKDIGLVDSNTTSCNSWSYDMYLIRAAVCYGLYPGICSVVHNEKSFSLKTMEDGQVLL 854
+ + +G+ SC+ DM +R AV G + C + + +V +
Sbjct: 587 RIARRLGI---TLKSCDG---DMEAVRKAVTAGFFANACRLEPHSNGVYKTIRGSEEVYI 640
Query: 855 HSNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAVSDS 893
H +SV R + W+V+ + ++R+ ++ S
Sbjct: 641 HPSSVLFR---VNPKWVVYQSIVSTERQYMRNVVTINPS 676
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 291 bits (745), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 225/755 (29%), Positives = 353/755 (46%), Gaps = 145/755 (19%)
Query: 195 RRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVR-GAV 253
+++ E R SLP ++ ++ + +N +L+I GETG GKTTQLPQF+ + G R G +
Sbjct: 32 QKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNA--GFCREGKM 89
Query: 254 CNIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRL 313
I TQPRRI+A++V++RVA E +LG+ VGY +R + T L + T G+LLR
Sbjct: 90 IGI--TQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREA 147
Query: 314 LVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRE-------------------- 353
L+D L + IIVDE H+R ++ D LL +LK + R +
Sbjct: 148 LLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTR 207
Query: 354 ---------------------LKLILMSATLHADLFSSYFNGASIMKIPGFTYPVRTHFL 392
LKLI+MSA+L A +FS YF GA + + G +PV
Sbjct: 208 DANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPV----- 262
Query: 393 EDILETSGYRLTPENQIDDYGQERIWKMNKQAPRKRKSQIASAVEDALRDADFKDYSLQT 452
DIL Y + PE +D+ D +L T
Sbjct: 263 -DIL----YTVHPE------------------------------------SDYVDATLVT 281
Query: 453 RESLSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDDISAL----KEKLLTHPVL 508
+ I E+PG +LVF+TG D+I ++ +E+L P
Sbjct: 282 --------------------IFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIP-- 319
Query: 509 GDPSQVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAK 568
D ++L L ++ S +Q +F G RK++LATNIAETSITI + +V+D G K
Sbjct: 320 EDKRKLLPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVK 379
Query: 569 ESSYDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRCVYGAFAEYQLPEILR 628
SYD L SK QR GRAGR PG+ + LYP + + PEI R
Sbjct: 380 ARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKR 439
Query: 629 TPLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDENENL-TILGHY 687
L ++ LQ+K+L + I F + P A+ A+ L +GAL ++ L +G+
Sbjct: 440 CNLSNIILQLKALGIDDIVGF--DFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQ 497
Query: 688 LTKFPMEPKLGKMLIFGAIFNCLDPILTIAAGLSVRDPFLTPLDKKDLAEAAKSQFCHEY 747
+++ P+EP K LI FNCL+ +L A LSV F P +K++ A +K+ F
Sbjct: 498 MSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVE 557
Query: 748 SDHLTLVRAY-------EGWKDA----EIDQAGQEYCWKNFLSAQSMKAIDGLRIEFLSL 796
DHLT + Y E K A ID+ +++C +N+++++S+K + +
Sbjct: 558 GDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREH 617
Query: 797 LKDIGLVDSNTTSCNSWSYDMYLIRAAVCYGLYPGICSVVHNEKSFSLKTMEDGQVL-LH 855
++ IG N +SC + DM R + + + + + +E G+V+ +H
Sbjct: 618 VEQIGF---NVSSCGN---DMLAFRRCLAASFF---LKAAQRQLDGTYRALESGEVVHIH 668
Query: 856 SNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAV 890
SV R ++FNE ++ + ++++ T +
Sbjct: 669 PTSVLFRAKP---ECVIFNELMQTSKKYIKNLTII 700
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 299/602 (49%), Gaps = 88/602 (14%)
Query: 193 EGRRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVRGA 252
E RR+ + LP Y + IL I R Q++V+ GETG GK+TQL QF+ +S + +
Sbjct: 298 ECRRLED---GLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASE-- 352
Query: 253 VCNIICTQPRRISAISVSERVASERGEKLGE-SVGYKVRLEGMKGRDTHLLFCTTGILLR 311
+I+CTQPR+I+A+++++RV E E +V + + +++ T LL+
Sbjct: 353 --SIVCTQPRKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQ 410
Query: 312 RLLVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATLHADLFSSY 371
+ DRSL G++ +I+DE HER +N D LL +LK LL+RR +L+L++MSAT A S Y
Sbjct: 411 HYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQY 470
Query: 372 FNGASIMKIPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQERIWKMNKQAPRKRKSQ 431
F I+ + G +PV E + S T EN +
Sbjct: 471 FFSCGILLVNGRNFPV-----EIVYSPSD---TEENSV-------------------VGG 503
Query: 432 IASAVEDALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTG 491
IAS V D ++ A I + E+ G +L F+T
Sbjct: 504 IASYVGDVVKMA------------------------------VEIHKTEKEGTILAFLTS 533
Query: 492 WDDISALKEKLLTHPVLGDPSQVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAET 551
++ E+ +T PS + L HG ++ EQ +F+ G RK++ ATNIAET
Sbjct: 534 QAEVEWACERFIT------PSAIAL-PLHGKLSFEEQFRVFQN-HPGRRKVIFATNIAET 585
Query: 552 SITINDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYP 611
S+TI V +V+D G KES Y+ L +S+ S +QR GRAGR +PG CY LY
Sbjct: 586 SLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYS 645
Query: 612 RCVYGAFAEYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKI 671
+ + + Q PEI R L L++ +L + +I+EF PE +A+ A++ L
Sbjct: 646 KNDFDSMNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAM--AVQNLVQ 703
Query: 672 IGALDEN---ENLTILGHYLTKFPMEPKLGKMLI------FGAIFNCLDPILTIAAGLSV 722
+GA+ E LT GH L K +EPKLGK+++ G L ++ A+ +
Sbjct: 704 LGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFC 763
Query: 723 RDPFLTPLDKKDLAEAAKSQFCHEYSDHLTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQS 782
R + D K A+ K QFC++ D TL+ Y+ W ++ + +CW+N L+A+S
Sbjct: 764 R---VGNFDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNK-WCWENSLNAKS 819
Query: 783 MK 784
M+
Sbjct: 820 MR 821
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 240 bits (613), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 190/602 (31%), Positives = 298/602 (49%), Gaps = 88/602 (14%)
Query: 193 EGRRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVRGA 252
E RR+ + LP Y + IL I Q++V+ GETG GK+TQL QF+ +S + +
Sbjct: 295 ECRRLED---GLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASE-- 349
Query: 253 VCNIICTQPRRISAISVSERVASERGEKLGE-SVGYKVRLEGMKGRDTHLLFCTTGILLR 311
+I+CTQPR+I+A+++++RV E E +V + + +++ T LL+
Sbjct: 350 --SIVCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQ 407
Query: 312 RLLVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATLHADLFSSY 371
+ DRSL G++ +I+DE HER +N D LL +L+ LL+RR +L+L++MSAT A+ S Y
Sbjct: 408 HYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQY 467
Query: 372 FNGASIMKIPGFTYPVRTHFLEDILETSGYRLTPENQIDDYGQERIWKMNKQAPRKRKSQ 431
I+ + G +PV E + SG T EN + +
Sbjct: 468 LFDCGILHVNGRNFPV-----EIVYSPSG---TEENSV-------------------VGR 500
Query: 432 IASAVEDALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTG 491
IAS D ++ A I + E+ G +L F+T
Sbjct: 501 IASYAGDVVKMA------------------------------VEIHKTEKEGTILAFLTS 530
Query: 492 WDDISALKEKLLTHPVLGDPSQVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAET 551
++ E+ + PS + L HG ++ EQ ++F+ G RK++ ATNIAET
Sbjct: 531 QAEVEWACERFVA------PSAIAL-PLHGKLSFEEQFMVFQN-YPGRRKVIFATNIAET 582
Query: 552 SITINDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYP 611
S+TI V +V+D G KES Y+ L +S+ S +QR GRAGR +PG CY LY
Sbjct: 583 SLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYS 642
Query: 612 RCVYGAFAEYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKI 671
+ + + Q PEI R L L++ +L + +I+ F PE +A+ AI+ L
Sbjct: 643 KTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAM--AIQNLVQ 700
Query: 672 IGALDENEN---LTILGHYLTKFPMEPKLGKMLI------FGAIFNCLDPILTIAAGLSV 722
+GA+ E LT GH L K +EPKLGK+++ G L ++ A+ +
Sbjct: 701 LGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFC 760
Query: 723 RDPFLTPLDKKDLAEAAKSQFCHEYSDHLTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQS 782
R + D K A+ K QFC++ D TL+ Y+ W D+ + +CW+N L+A+S
Sbjct: 761 R---VGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNK-WCWENSLNAKS 816
Query: 783 MK 784
M+
Sbjct: 817 MR 818
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 199 bits (505), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/433 (30%), Positives = 225/433 (51%), Gaps = 23/433 (5%)
Query: 462 DCIGFNLIEYILCNICENERPGAVLVFMTGWDDISALKEKLLTH-PVLG-DPSQVLLLTC 519
D + LI + ++ E E G +LVF+TG ++I + + L LG + ++++L
Sbjct: 705 DYLDAALITVLQIHLTEPE--GDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPV 762
Query: 520 HGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKESSYDALNNTP 579
+ ++ S Q IF+ P G RK+V+ATNIAE S+TI+ + +V+D G AK++ Y+
Sbjct: 763 YSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLE 822
Query: 580 CLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRCVY-GAFAEYQLPEILRTPLQSLCLQI 638
L+ T IS+ S +QR GRAGR PG+CY LY Y +PEI R L L +
Sbjct: 823 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTM 882
Query: 639 KSLKLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYLTKFPMEPKLG 698
K++ + + F + P+ A+ +A+E L +GALDE LT LG + +FP+EP L
Sbjct: 883 KAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLS 940
Query: 699 KMLIFGAIFNCLDPILTIAAGLSVRDPFLTPLDKKDLAEAAKSQFCHEYSDHLTLVRAYE 758
KML+ C D ILT+ A + + F P +K+ A+ +++F DHLTL+ YE
Sbjct: 941 KMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYE 1000
Query: 759 GWKDAEIDQAGQEYCWKNFLSAQSMKAIDGLRIEFLSLLKDIGLVDSNTTSCNSWSYDMY 818
WK +C++NF+ ++S++ +R + LS++ L D T N
Sbjct: 1001 AWKAKNFSGP---WCFENFIQSRSLRRAQDVRKQLLSIMDKYKL-DVVTAGKN-----FT 1051
Query: 819 LIRAAVCYGLYPGICSVVHNEKSFSLKTMEDGQVLLH-SNSVNARETKIPYPWLVFNEKI 877
IR A+ G + E +L +E+ V +H S+++ R+ W+++++ +
Sbjct: 1052 KIRKAITAGFFFHGARKDPQEGYRTL--VENQPVYIHPSSALFQRQPD----WVIYHDLV 1105
Query: 878 KVNSVFLRDSTAV 890
++R+ T +
Sbjct: 1106 MTTKEYMREVTVI 1118
Score = 176 bits (447), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 129/189 (68%), Gaps = 4/189 (2%)
Query: 199 EFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVRGAVCNIIC 258
E R SLP YK K+ ++ A+ NQVLV+ GETG GKTTQ+ Q++ E+ + +G I C
Sbjct: 510 EQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGY-TTKG---KIGC 565
Query: 259 TQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLVDRS 318
TQPRR++A+SV++RVA E G +LGE VGY +R E G DT + + T G+LLR +L+D +
Sbjct: 566 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 625
Query: 319 LKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATLHADLFSSYFNGASIM 378
L + I++DE HER I+ D L +LK L+ RR +L+LI+ SATL A+ FS YF +I
Sbjct: 626 LSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIF 685
Query: 379 KIPGFTYPV 387
IPG T+PV
Sbjct: 686 TIPGRTFPV 694
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 189 bits (480), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 208/432 (48%), Gaps = 16/432 (3%)
Query: 472 ILCNICENERPGAVLVFMTGWDDISALKEKL---LTHPVLGDPSQVLLLTCHGSMASSEQ 528
+ +I E G +L+FMTG DDI L +L + G ++ HGS+ Q
Sbjct: 203 VAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQ 262
Query: 529 RLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKESSYDALNNTPCLLPTWISK 588
+F P R+ +++TNIAETS+T++ VV+V+D G K+ Y+ + L ISK
Sbjct: 263 VRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISK 322
Query: 589 VSVQQRKGRAGRVQPGECYHLYPRCVY-GAFAEYQLPEILRTPLQSLCLQIKSLKLGSIS 647
V QR GRAGR +PG+CY LYP VY F + +PEI RT L L +KSL L I
Sbjct: 323 VQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDID 382
Query: 648 EFLSRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYLTKFPMEPKLGKMLIFGAIF 707
L +P ++++A++ L I A+DEN +T +G ++ P+EP L + LI
Sbjct: 383 ILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANET 442
Query: 708 NCLDPILTIAAGLSVRDPFL----TPLDKK-DLAEAAKSQFCHEYSDHLTLVRAYEGWKD 762
CL LT+ A LS L P +KK E + Y DH+ L++ +E W
Sbjct: 443 GCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDR 502
Query: 763 AEIDQAGQEYCWKNFLSAQSMKAIDGLRIEFLSLLKDIG--LVDSNTTSCNSWSYDMYL- 819
D +C +N + + M + +R + +++ I ++ S S D Y
Sbjct: 503 TNYDPV---WCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRK 559
Query: 820 IRAAVCYGLYPGICSVVHNEKSFSLKTMEDGQVLLHSNSVNARETKIPYP-WLVFNEKIK 878
+R A+C G I + + + + V +H +SV + + P ++V++E I
Sbjct: 560 LRKALCVGNANQIAERMLRHNGYRTLSFQSQLVQVHPSSVLSADNDGMMPNYVVYHELIS 619
Query: 879 VNSVFLRDSTAV 890
F+R+ AV
Sbjct: 620 TTRPFMRNVCAV 631
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 5/187 (2%)
Query: 202 CSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVRGAVCNIICTQP 261
+LP + +E I+ + +N V+VI GETG GK+TQL Q + G + V I TQP
Sbjct: 2 ANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRH--GYTKSGV--IAITQP 57
Query: 262 RRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLVDRSLKG 321
RR++A+SV+ RVA E LGE VGY +R E T + + T G+LLR L + L
Sbjct: 58 RRVAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDD 117
Query: 322 VTHIIVDEIHERGINEDFLLVVLKDLL-ARRRELKLILMSATLHADLFSSYFNGASIMKI 380
+ II+DE HER +N D LL ++K L+ R K+++ SATL + S +F+G ++ +
Sbjct: 118 YSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNV 177
Query: 381 PGFTYPV 387
PG YPV
Sbjct: 178 PGKLYPV 184
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 134/218 (61%), Gaps = 14/218 (6%)
Query: 185 QQAWQESPEGRRMLEFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILES 244
+ A +++ EGR EF LP + +E +L I NQVLVI GETG GKTTQ+PQ++ E+
Sbjct: 202 KTAAEKAREGR---EF---LPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEA 255
Query: 245 EIGSVRGAVCNIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFC 304
+ RG I CTQPRR++A+SV+ RVA E G KLG VGY +R E T + +
Sbjct: 256 GY-TKRG---KIGCTQPRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYM 311
Query: 305 TTGILLRRLLVDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATLH 364
T G+LLR LL++ L + II+DE HER ++ D L ++KD+ R +L+LI+ SATL
Sbjct: 312 TDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLE 371
Query: 365 ADLFSSYFNGASIMKIPGFTYPVRTHFLE----DILET 398
A FS YF+ A I IPG YPV F + D LET
Sbjct: 372 AKKFSEYFDSARIYLIPGRRYPVEKLFRKCPEPDYLET 409
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 122/229 (53%), Gaps = 13/229 (5%)
Query: 458 CWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDDI----SALKEKLLTHPVLGDPSQ 513
C PD + + + I + E G +LVF+TG ++I + LK +++ G S+
Sbjct: 401 CPEPDYL--ETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKG--SE 456
Query: 514 VLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKESSYD 573
+++ + ++ + Q +FE G RK+VLATNIAETS+TI+ V +V+D G K +SY+
Sbjct: 457 IIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYN 516
Query: 574 ALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRCVYGAFAEYQLPEILRTPLQS 633
LL T ISK S QR GR+GR PG+C+ LY +PEI R L S
Sbjct: 517 PRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYN---IKDLEPTTIPEIQRANLAS 573
Query: 634 LCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDENENLT 682
+ L +KSL + + F + P A+ A+E L +GALDE +T
Sbjct: 574 VVLTLKSLGIQDVFNF--DFMDPPPENALLKALELLYALGALDEIGEIT 620
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 164 bits (415), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 143/506 (28%), Positives = 236/506 (46%), Gaps = 63/506 (12%)
Query: 203 SLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGSVRGAVCNIICTQPR 262
SLP K I+ I N+V +I GE GCGK++Q+PQF+LE+ + I+CTQPR
Sbjct: 25 SLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAP-------ILCTQPR 77
Query: 263 RISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLVDRSLKGV 322
R + ++V++ VA R LG +GY + + + +LF T G+LL +L D+ L +
Sbjct: 78 RFAVVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEML-DKGLNAL 136
Query: 323 TH--IIVDEIHERGINEDFLLVVLKDLLARRRELKLILMSATL----HADLFSSYFNGAS 376
+ II+DE+HER + D +LV +K L + +L+++LMSAT + D F G
Sbjct: 137 KYKVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKELGRGER 196
Query: 377 IMKIPGFTYPVRTHFLEDIL--ETSGYRLTPENQIDDYGQERIWKMNKQAPRKRKSQIAS 434
+ + + RT F +L E L + + Y +P ++I
Sbjct: 197 VEVVAIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAY-------CPGPSPSSADTEIKP 249
Query: 435 AVEDALRDADFKDYSLQTRESLSCWNPDCIGFNLIEYILCNICENERPGAVLVFMTGWDD 494
+++ + D LI YI + E + ++LVF+ +
Sbjct: 250 ELQNLIHD-------------------------LILYI--HEKEPDIEKSILVFLPTYYS 282
Query: 495 ISALKEKLLTHPVLGDPSQVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSIT 554
+ +L P +L H S+ +EQ L + RK++LATNIAE+S+T
Sbjct: 283 LEQQYHQL--EPFFASFEVHIL---HRSI-DTEQALAAMKICRSRRKVILATNIAESSVT 336
Query: 555 INDVVFVLDCGKAKESSYDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRCV 614
I V +V+D ++ + +D + W+S+ +QR+GR GR GE Y L P
Sbjct: 337 IPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRRGRTGRTCDGEVYRLVPSAF 396
Query: 615 YGAFAEYQLPEILRTPLQSLCLQI---KSLKLGSISEFLSRALQSPEILAVQNAIEYLKI 671
+ E++ P IL+ L+ L I +S + + L++A+ P+ V +A+ L
Sbjct: 397 FNKLEEHEPPSILKLSLRQQVLHICCTESRAINDANALLAKAMDPPDPDVVDDALRMLLS 456
Query: 672 IGALDENE----NLTILGHYLTKFPM 693
I AL ++ T G L FP+
Sbjct: 457 IQALRKSPRGRYEPTFYGRLLASFPL 482
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 162/341 (47%), Gaps = 42/341 (12%)
Query: 511 PSQVLLLTCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKES 570
P ++ +L + ++ + Q +FEE E R +V+ATN+AETS+TI + +V+D G+ K
Sbjct: 644 PGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVK 703
Query: 571 SYDALNNTPCLLPTWISKVSVQQRKGRAGRVQPGECYHLYPRCVY-GAFAEYQLPEILRT 629
+YD+ WIS+ S QR GRAGR PG CY LY V+ F E LPEI++
Sbjct: 704 NYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKV 763
Query: 630 PLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYLT 689
P+ + L +KS+ + + F PE A++ A LK + ALD N LT LG ++
Sbjct: 764 PVDGVILLMKSMNIPKVENFPFPT--PPEPSAIREAERCLKALEALDSNGGLTPLGKAMS 821
Query: 690 KFPMEPKLGKMLI-----------FGAIFNCLDPILTIAAGLSVRDPFLTPL-------- 730
+PM P+ +ML+ + L + A LS+ +P +
Sbjct: 822 HYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKNES 881
Query: 731 ----------------DKKDLAEAAKSQFCHEYSDHLTLVRAYEGWKDAEIDQAGQEYCW 774
D+K+ +AA+ +F + SD LT+ A + E+ + G +C
Sbjct: 882 KDADKTVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAYALHSF---EVSENGMGFCE 938
Query: 775 KNFLSAQSMKAIDGLRIEFLSLLKDIGLVDSNTTSCNSWSY 815
N L ++M + L+ + L L+ + S T SW++
Sbjct: 939 ANGLHLKTMDEMSKLKDQLLRLVFNC-CKPSETEDSFSWTH 978
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 127/224 (56%), Gaps = 33/224 (14%)
Query: 199 EFRCSLPAYKEKEAILSAISRNQVLVISGETGCGKTTQLPQFILESEIGS----VRGAVC 254
E R LP ++ I+ AI+R+ ++ISG+TGCGKTTQ+PQF+ E+ GS R +
Sbjct: 236 ETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGII 295
Query: 255 NIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLL 314
I TQPRR++ ++ ++RVA E G +LG+ VG++VR + G ++ + F T GILLR +
Sbjct: 296 GI--TQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQ 353
Query: 315 VDRSLKGVTHIIVDEIHERGINEDFLLVVLKDLLARRRE--------------------- 353
D L+ + II+DE HER +N D L+ +L ++ R+E
Sbjct: 354 NDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQI 413
Query: 354 --LKLILMSATLHADLFSS----YFNGASIMKIPGFTYPVRTHF 391
LKLILMSATL + F S + N ++++P YPV HF
Sbjct: 414 TPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHF 457
>AT5G14900.1 | Symbols: | helicase associated (HA2)
domain-containing protein | chr5:4822676-4823581 REVERSE
LENGTH=301
Length = 301
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 136/265 (51%), Gaps = 16/265 (6%)
Query: 629 TPLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTILGHYL 688
T L + L +K L + ++ F +P+ LA A++ L +GALD++ NLT G +
Sbjct: 2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLA--RALDDLYHLGALDDDCNLTKTGEMM 59
Query: 689 TKFPMEPKLGKMLIFGAIFNCLDPILTIAAGLSVRDPFLTPL-DKKDLAEAAKSQFCHEY 747
++FP++P++ KMLI FNC + IL+I+A LSV + F+ P + + A+ AKS F H
Sbjct: 60 SEFPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHID 119
Query: 748 SDHLTLVRAYEGWKDAEIDQAGQEYCWKNFLSAQSMKAIDGLRIEFLSLLKDIGLVDSNT 807
DHLTL+ + + D +C F++ ++MK+ +R + + ++ +
Sbjct: 120 GDHLTLLNLFHAFLQNNQD---PNWCCTKFINYRAMKSAVSVREQLVRIMLRFQI---KL 173
Query: 808 TSCNSWSYDMYL-IRAAVCYGLYPGICSVVHNEKSFSLKTMEDGQVLLH-SNSVNARETK 865
S + S D Y+ IR A+ G + + + + + +D V LH SN ++ +
Sbjct: 174 CSPDFNSRDYYVNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCLDHKPE- 232
Query: 866 IPYPWLVFNEKIKVNSVFLRDSTAV 890
W+V+NE + + F+R T +
Sbjct: 233 ----WVVYNEYVFTSRNFIRTVTHI 253