Miyakogusa Predicted Gene

Lj0g3v0326149.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0326149.2 tr|I3TAG7|I3TAG7_LOTJA Uroporphyrinogen
decarboxylase OS=Lotus japonicus PE=2 SV=1,100,0,UROPORPHYRINOGEN
DECARBOXYLASE,Uroporphyrinogen decarboxylase HemE;
METHYLTETRAHYDROFOLATE:HOMOCYSTE,CUFF.22185.2
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40490.1 | Symbols: HEME2 | Uroporphyrinogen decarboxylase | ...   281   2e-76
AT3G14930.2 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   190   4e-49
AT3G14930.1 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   190   4e-49
AT3G14930.3 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   189   6e-49

>AT2G40490.1 | Symbols: HEME2 | Uroporphyrinogen decarboxylase |
           chr2:16912961-16914988 FORWARD LENGTH=394
          Length = 394

 Score =  281 bits (718), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 136/157 (86%), Positives = 144/157 (91%)

Query: 1   MARYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKKTHPELPLILYAS 60
           M  YI+YQAD+GAQAVQIFDSWATELSPVDFEEFSLPYLKQIV+ VK+THP LPLILYAS
Sbjct: 236 MITYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVEAVKQTHPNLPLILYAS 295

Query: 61  GSGGLLERLALTGVDVVSLDWTVDMADGRRRLGPNITVQGNVDPGVLFGSKEIITDRIHD 120
           GSGGLLERLA TGVDVVSLDWTVDMA+GR RLG +I VQGNVDPGVLFGSKE IT RIHD
Sbjct: 296 GSGGLLERLARTGVDVVSLDWTVDMAEGRDRLGRDIAVQGNVDPGVLFGSKEFITSRIHD 355

Query: 121 TVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGI 157
           TV+KAGR KHILNLGHGI VGTPEENVAHFFEVA+ I
Sbjct: 356 TVKKAGRDKHILNLGHGIKVGTPEENVAHFFEVAQEI 392


>AT3G14930.2 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5020675-5022577 FORWARD LENGTH=418
          Length = 418

 Score =  190 bits (482), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 85/157 (54%), Positives = 114/157 (72%)

Query: 1   MARYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKKTHPELPLILYAS 60
           +  Y+ YQ ++GA  +QIFDSW  +L+P  +E +S PY+++I+  VKK  P+ P++ Y +
Sbjct: 241 ITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDTPIVFYIN 300

Query: 61  GSGGLLERLALTGVDVVSLDWTVDMADGRRRLGPNITVQGNVDPGVLFGSKEIITDRIHD 120
           G+GGLLER+  TG DV+ LDWTVDMADGRRRLG  ++VQGNVDP  LF     +T+ I  
Sbjct: 301 GNGGLLERMKGTGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLPALTEEIER 360

Query: 121 TVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGI 157
            V+ AG   HILNLGHG++VGTPEE VAHFFE A+ +
Sbjct: 361 VVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARNL 397


>AT3G14930.1 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5020675-5022577 FORWARD LENGTH=418
          Length = 418

 Score =  190 bits (482), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 85/157 (54%), Positives = 114/157 (72%)

Query: 1   MARYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKKTHPELPLILYAS 60
           +  Y+ YQ ++GA  +QIFDSW  +L+P  +E +S PY+++I+  VKK  P+ P++ Y +
Sbjct: 241 ITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDTPIVFYIN 300

Query: 61  GSGGLLERLALTGVDVVSLDWTVDMADGRRRLGPNITVQGNVDPGVLFGSKEIITDRIHD 120
           G+GGLLER+  TG DV+ LDWTVDMADGRRRLG  ++VQGNVDP  LF     +T+ I  
Sbjct: 301 GNGGLLERMKGTGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLPALTEEIER 360

Query: 121 TVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGI 157
            V+ AG   HILNLGHG++VGTPEE VAHFFE A+ +
Sbjct: 361 VVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARNL 397


>AT3G14930.3 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5021290-5022577 FORWARD LENGTH=341
          Length = 341

 Score =  189 bits (480), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 85/157 (54%), Positives = 114/157 (72%)

Query: 1   MARYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKKTHPELPLILYAS 60
           +  Y+ YQ ++GA  +QIFDSW  +L+P  +E +S PY+++I+  VKK  P+ P++ Y +
Sbjct: 164 ITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDTPIVFYIN 223

Query: 61  GSGGLLERLALTGVDVVSLDWTVDMADGRRRLGPNITVQGNVDPGVLFGSKEIITDRIHD 120
           G+GGLLER+  TG DV+ LDWTVDMADGRRRLG  ++VQGNVDP  LF     +T+ I  
Sbjct: 224 GNGGLLERMKGTGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLPALTEEIER 283

Query: 121 TVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGI 157
            V+ AG   HILNLGHG++VGTPEE VAHFFE A+ +
Sbjct: 284 VVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARNL 320