Miyakogusa Predicted Gene

Lj0g3v0326149.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0326149.1 tr|I3TAG7|I3TAG7_LOTJA Uroporphyrinogen
decarboxylase OS=Lotus japonicus PE=2 SV=1,99.44,0,UROPORPHYRINOGEN
DECARBOXYLASE,Uroporphyrinogen decarboxylase HemE;
METHYLTETRAHYDROFOLATE:HOMOCYSTE,CUFF.22185.1
         (178 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40490.1 | Symbols: HEME2 | Uroporphyrinogen decarboxylase | ...   238   2e-63
AT3G14930.2 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   157   3e-39
AT3G14930.1 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   157   3e-39
AT3G14930.3 | Symbols: HEME1 | Uroporphyrinogen decarboxylase | ...   134   4e-32

>AT2G40490.1 | Symbols: HEME2 | Uroporphyrinogen decarboxylase |
           chr2:16912961-16914988 FORWARD LENGTH=394
          Length = 394

 Score =  238 bits (606), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 114/149 (76%), Positives = 130/149 (87%), Gaps = 1/149 (0%)

Query: 31  ISCTLPGT-VAEPKLTAAAEPLLLNAVRGLDVERPPVWLMRQAGRYMKSYQTICEKHPSF 89
           + C++ GT V E K++A +EPLLL AV+G  V+RPPVWLMRQAGRYMKSYQT+CEK+PSF
Sbjct: 34  VRCSVEGTTVTERKVSATSEPLLLRAVKGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSF 93

Query: 90  RERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPIHSA 149
           R+RSEN DLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGP+IF+P  SA
Sbjct: 94  RDRSENADLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSA 153

Query: 150 AQVDQVTEFIPQGSVPYVGEALTILRKEI 178
           A V QV EF+P+ SVPYVGEAL  LR E+
Sbjct: 154 ADVAQVREFVPEESVPYVGEALRRLRNEV 182


>AT3G14930.2 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5020675-5022577 FORWARD LENGTH=418
          Length = 418

 Score =  157 bits (397), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 73/134 (54%), Positives = 100/134 (74%), Gaps = 1/134 (0%)

Query: 45  TAAAEPLLLNAVRGLDVERPPVWLMRQAGRYMKSYQTICEKHPSFRERSENVDLVVEISL 104
           +++++PLL+ A +G  + RPP W+MRQAGRYM  YQ + +KHPSFRERSEN DL+VEISL
Sbjct: 55  SSSSDPLLVKAAKGQAISRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISL 114

Query: 105 QPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPIHSAAQVDQVTEFIPQGSV 164
           QPW+ F+PDGVI+FSDILTPL    +PFDI + KGPVI  PI +   + ++   I    +
Sbjct: 115 QPWQAFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRLHP-IDFEKL 173

Query: 165 PYVGEALTILRKEI 178
            +VG++L ILR+E+
Sbjct: 174 QFVGDSLKILRREV 187


>AT3G14930.1 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5020675-5022577 FORWARD LENGTH=418
          Length = 418

 Score =  157 bits (397), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 73/134 (54%), Positives = 100/134 (74%), Gaps = 1/134 (0%)

Query: 45  TAAAEPLLLNAVRGLDVERPPVWLMRQAGRYMKSYQTICEKHPSFRERSENVDLVVEISL 104
           +++++PLL+ A +G  + RPP W+MRQAGRYM  YQ + +KHPSFRERSEN DL+VEISL
Sbjct: 55  SSSSDPLLVKAAKGQAISRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISL 114

Query: 105 QPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPIHSAAQVDQVTEFIPQGSV 164
           QPW+ F+PDGVI+FSDILTPL    +PFDI + KGPVI  PI +   + ++   I    +
Sbjct: 115 QPWQAFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRLHP-IDFEKL 173

Query: 165 PYVGEALTILRKEI 178
            +VG++L ILR+E+
Sbjct: 174 QFVGDSLKILRREV 187


>AT3G14930.3 | Symbols: HEME1 | Uroporphyrinogen decarboxylase |
           chr3:5021290-5022577 FORWARD LENGTH=341
          Length = 341

 Score =  134 bits (336), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 83/111 (74%), Gaps = 1/111 (0%)

Query: 68  LMRQAGRYMKSYQTICEKHPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLSG 127
           +MRQAGRYM  YQ + +KHPSFRERSEN DL+VEISLQPW+ F+PDGVI+FSDILTPL  
Sbjct: 1   MMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQPWQAFRPDGVIIFSDILTPLPA 60

Query: 128 MNIPFDIVKGKGPVIFDPIHSAAQVDQVTEFIPQGSVPYVGEALTILRKEI 178
             +PFDI + KGPVI  PI +   + ++   I    + +VG++L ILR+E+
Sbjct: 61  FGVPFDIEEVKGPVIQSPIRTEEDMKRLHP-IDFEKLQFVGDSLKILRREV 110