Miyakogusa Predicted Gene

Lj0g3v0325939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0325939.1 Non Chatacterized Hit- tr|C6TA59|C6TA59_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57356
PE,66.99,0,PHOSPHOPENTOTHENOYLCYSTEINE DECARBOXYLASE,NULL;
HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE ,CUFF.22150.1
         (214 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48605.1 | Symbols: ATHAL3B, HAL3B, HAL3 | Flavoprotein | chr...   280   6e-76
AT3G18030.1 | Symbols: ATHAL3A, HAL3A, HAL3, ATHAL3 | HAL3-like ...   272   1e-73

>AT1G48605.1 | Symbols: ATHAL3B, HAL3B, HAL3 | Flavoprotein |
           chr1:17969395-17970080 REVERSE LENGTH=201
          Length = 201

 Score =  280 bits (716), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 125/192 (65%), Positives = 155/192 (80%)

Query: 21  VTRKPRILLAACGSTAAVKFPILCHTFSDWAEVRAVVTTTASRFIDKNTIPNNVVAFCDE 80
           VTRKPRILLAA GS A++KF  LCH FS+WAEV+AV + ++  F+DK ++P NV  + DE
Sbjct: 8   VTRKPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASKSSLNFVDKPSLPQNVTLYTDE 67

Query: 81  HEWICWNKIGDNLLHIELSTWADIMVIAPLSANTLAKIAGGLCDNLLTCIVRAWDYSKPM 140
            EW  WNKIGD +LHIEL  WAD+M+IAPLSANTLAKIAGGLCDNLLTCIVRAWDYSKP+
Sbjct: 68  DEWSSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIAGGLCDNLLTCIVRAWDYSKPL 127

Query: 141 FVAPSMNKFMWRNPFTEKHFMCIEELGVSLIPPVTTRSASGDHDTGAMADPTTIYSTVRF 200
           FVAP+MN  MW NPFTE+H + ++ELG++LIPP+  + A GD+  GAMA+P+ IYSTVR 
Sbjct: 128 FVAPAMNTLMWNNPFTERHLVLLDELGITLIPPIKKKLACGDYGNGAMAEPSLIYSTVRL 187

Query: 201 FFERQILKKKPG 212
           F+E Q  K++ G
Sbjct: 188 FWESQARKQRDG 199


>AT3G18030.1 | Symbols: ATHAL3A, HAL3A, HAL3, ATHAL3 | HAL3-like
           protein A | chr3:6167883-6168629 REVERSE LENGTH=209
          Length = 209

 Score =  272 bits (696), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 151/190 (79%)

Query: 23  RKPRILLAACGSTAAVKFPILCHTFSDWAEVRAVVTTTASRFIDKNTIPNNVVAFCDEHE 82
           RKPR+LLAA GS AA+KF  LCH F++WAEVRAVVT ++  F+DK ++P  V  + DE E
Sbjct: 18  RKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLDKLSLPQEVTLYTDEDE 77

Query: 83  WICWNKIGDNLLHIELSTWADIMVIAPLSANTLAKIAGGLCDNLLTCIVRAWDYSKPMFV 142
           W  WNKIGD +LHIEL  WAD++VIAPLSANTL KIAGGLCDNLLTCI+RAWDY+KP+FV
Sbjct: 78  WSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFV 137

Query: 143 APSMNKFMWRNPFTEKHFMCIEELGVSLIPPVTTRSASGDHDTGAMADPTTIYSTVRFFF 202
           AP+MN  MW NPFTE+H + ++ELG++LIPP+  R A GD+  GAMA+P+ IYSTVR F+
Sbjct: 138 APAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIYSTVRLFW 197

Query: 203 ERQILKKKPG 212
           E Q  ++  G
Sbjct: 198 ESQAHQQTGG 207