Miyakogusa Predicted Gene

Lj0g3v0325929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0325929.1 CUFF.22151.1
         (201 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08500.1 | Symbols: ENODL18, AtENODL18 | early nodulin-like p...   102   2e-22
AT3G27200.1 | Symbols:  | Cupredoxin superfamily protein | chr3:...    54   8e-08

>AT1G08500.1 | Symbols: ENODL18, AtENODL18 | early nodulin-like
           protein 18 | chr1:2689110-2689881 FORWARD LENGTH=228
          Length = 228

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 78/127 (61%), Gaps = 6/127 (4%)

Query: 25  GYHNHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVY 84
            Y N+TVG + GWF      +PSANY  WA +++F+LGDFLIFNT+SN +V+QTY+   Y
Sbjct: 26  AYKNYTVGESTGWF--DIQERPSANYQKWADSKSFSLGDFLIFNTDSNHSVVQTYDFKTY 83

Query: 85  RNCTADDSDNG-TFIYSGGGASFSE--ALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAF 141
           ++C  D+++N  T  +S    S +    +++ VPL   G NY+FS    DG QC+ G  F
Sbjct: 84  KDCDYDNNENNDTTEWSAANPSATSPVPVSISVPLVKEGSNYFFS-GNYDGEQCKFGQHF 142

Query: 142 EIKVQRG 148
            I V  G
Sbjct: 143 MINVTHG 149


>AT3G27200.1 | Symbols:  | Cupredoxin superfamily protein |
           chr3:10043738-10044340 REVERSE LENGTH=174
          Length = 174

 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 21/118 (17%)

Query: 28  NHTVGGAAGWFFNTTTSKPSANYSSWASTQTFNLGDFLIFNTNSNQTVIQTYNETVYRNC 87
            H +GG+ GW       + S ++ SW+S Q+F +GD ++F  +   +V++  +ET Y++C
Sbjct: 25  RHVIGGSQGW-------EQSVDFDSWSSDQSFKVGDQIVFKYSELHSVVELGSETAYKSC 77

Query: 88  TADDSDNGTFIYSGGGASFSEALTVRVPLTIVGPNYYFSDAAGDGIQCRSGMAFEIKV 145
               S N          S S    V V L+  G  Y+     G    C  GM  ++ V
Sbjct: 78  DLGTSVN----------SLSSGNDV-VKLSKTGTRYFACGTVG---HCEQGMKIKVNV 121