Miyakogusa Predicted Gene

Lj0g3v0325879.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0325879.1 Non Chatacterized Hit- tr|I1MDL1|I1MDL1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2934
PE=,92.04,0,SUBFAMILY NOT NAMED,NULL; NFRKB-RELATED,Nuclear factor
related to kappa-B-binding protein; seg,NULL,CUFF.22146.1
         (338 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G45830.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   422   e-118

>AT3G45830.1 | Symbols:  | unknown protein; FUNCTIONS IN:
            molecular_function unknown; INVOLVED IN:
            biological_process unknown; LOCATED IN:
            cellular_component unknown; EXPRESSED IN: 24 plant
            structures; EXPRESSED DURING: 15 growth stages; BEST
            Arabidopsis thaliana protein match is: unknown protein
            (TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in
            100 species: Archae - 0; Bacteria - 7; Metazoa - 236;
            Fungi - 15; Plants - 108; Viruses - 2; Other Eukaryotes -
            131 (source: NCBI BLink). | chr3:16841277-16845173
            FORWARD LENGTH=1298
          Length = 1298

 Score =  422 bits (1085), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/332 (68%), Positives = 252/332 (75%), Gaps = 15/332 (4%)

Query: 1    MLVKLVDSFANWLKCGQETLQQIGSLPAPPLALMQVNLDEKERFRDLRAQKSLNTINPNS 60
            MLVKLVDSFANWLK GQETLQQIGSLP PPL+LMQ NLDEKERF+DLRAQKSL+TI  +S
Sbjct: 974  MLVKLVDSFANWLKTGQETLQQIGSLPEPPLSLMQCNLDEKERFKDLRAQKSLSTITQSS 1033

Query: 61   EEVRTYFRKEEVLRYSIPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPP 120
            EE R YFRKEE LRYSIPDRAF YTAADGKKSIVAPLRR GGKPTSKARDHFMLKR+RPP
Sbjct: 1034 EEARAYFRKEEFLRYSIPDRAFVYTAADGKKSIVAPLRRGGGKPTSKARDHFMLKRERPP 1093

Query: 121  HVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYIVEEVSDAQINQVVSGALDRLHYERD 180
            HVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYIVE+VSD+Q+NQVVSGALDRLHYERD
Sbjct: 1094 HVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYIVEDVSDSQVNQVVSGALDRLHYERD 1153

Query: 181  PCVQFDGERKLWVYLHXXXXXXXXXXXGTSSTKKWKRQKK-DPADLTDQGAVTVAQQGTE 239
            PCVQFD ERKLWVYLH           GTSSTKKWKR KK       +Q AVTVA  G E
Sbjct: 1154 PCVQFDSERKLWVYLHRDREQEDFEDDGTSSTKKWKRPKKEAAEQTEEQEAVTVAFLGNE 1213

Query: 240  EQSGYDLCSDLNVDPPV-IDDDKG-VEFLSSDTRPNAEDHVDVNPASEEGNVCEGNS-MA 296
            EQ+  ++ S+     P  +D D+G  + L ++T   AE+        +  N  +GN    
Sbjct: 1214 EQTETEMGSEPKTGEPTGLDGDQGATDQLCNETEQAAEEQ-------DGENTAQGNEPTI 1266

Query: 297  WE---ALSLNPTATGE-LCQENSTNEDFDEES 324
            WE   A+  NP      +CQENS N+DFD+E+
Sbjct: 1267 WEPDPAVVSNPVEDNTFICQENSVNDDFDDET 1298