Miyakogusa Predicted Gene

Lj0g3v0324759.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324759.1 Non Chatacterized Hit- tr|G7J5G4|G7J5G4_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,69.12,8e-19,RST,RST domain of plant C-terminal,CUFF.22066.1
         (75 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62520.1 | Symbols: SRO5 | similar to RCD one 5 | chr5:250980...    64   2e-11
AT3G47720.1 | Symbols: SRO4 | similar to RCD one 4 | chr3:175927...    61   1e-10
AT1G32230.2 | Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE prote...    50   3e-07
AT1G32230.1 | Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE prote...    50   3e-07
AT1G23550.1 | Symbols: SRO2 | similar to RCD one 2 | chr1:835091...    49   5e-07
AT1G32230.3 | Symbols: AtRCD1 | WWE protein-protein interaction ...    49   7e-07

>AT5G62520.1 | Symbols: SRO5 | similar to RCD one 5 |
           chr5:25098071-25099264 FORWARD LENGTH=309
          Length = 309

 Score = 63.5 bits (153), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 41/58 (70%)

Query: 1   MPFPTLISALSKVLPQPDIALLSRLHKAKQERKISRQELIQKVRQIAGDKLLTAVIKS 58
           M FP LI ALSK LP   I ++ + +K +Q R+I+R ELIQ+VR I GDKLL  +IK+
Sbjct: 245 MAFPVLIKALSKFLPPSQILVIQKHYKDQQNRRITRSELIQRVRSITGDKLLVHIIKA 302


>AT3G47720.1 | Symbols: SRO4 | similar to RCD one 4 |
           chr3:17592771-17593966 FORWARD LENGTH=316
          Length = 316

 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 41/58 (70%)

Query: 1   MPFPTLISALSKVLPQPDIALLSRLHKAKQERKISRQELIQKVRQIAGDKLLTAVIKS 58
           + FP LI+++SK L Q  I L+ + +K  Q+R+ISR ELIQ++R I GD LL  +IKS
Sbjct: 250 ISFPVLINSISKFLNQSQIRLIHKHYKEHQDRRISRCELIQRLRSITGDSLLVQIIKS 307


>AT1G32230.2 | Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE
           protein-protein interaction domain protein family |
           chr1:11613427-11615894 FORWARD LENGTH=588
          Length = 588

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 43/64 (67%)

Query: 1   MPFPTLISALSKVLPQPDIALLSRLHKAKQERKISRQELIQKVRQIAGDKLLTAVIKSYR 60
           MPFPTL +A+S  + + D+ L++  ++  +++K++R E ++K+R I GD LL + I + +
Sbjct: 507 MPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDDLLRSTITTLQ 566

Query: 61  AKKK 64
            + K
Sbjct: 567 NQPK 570


>AT1G32230.1 | Symbols: RCD1, CEO, CEO1, ATP8, AtRCD1 | WWE
           protein-protein interaction domain protein family |
           chr1:11613427-11615894 FORWARD LENGTH=589
          Length = 589

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 43/64 (67%)

Query: 1   MPFPTLISALSKVLPQPDIALLSRLHKAKQERKISRQELIQKVRQIAGDKLLTAVIKSYR 60
           MPFPTL +A+S  + + D+ L++  ++  +++K++R E ++K+R I GD LL + I + +
Sbjct: 508 MPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDDLLRSTITTLQ 567

Query: 61  AKKK 64
            + K
Sbjct: 568 NQPK 571


>AT1G23550.1 | Symbols: SRO2 | similar to RCD one 2 |
           chr1:8350912-8352232 FORWARD LENGTH=323
          Length = 323

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 41/62 (66%)

Query: 3   FPTLISALSKVLPQPDIALLSRLHKAKQERKISRQELIQKVRQIAGDKLLTAVIKSYRAK 62
           F +L+S LS  +    + L+ R +   ++RKI R +L++K+R++AGD LL  +IK+++ +
Sbjct: 259 FASLMSMLSTSMDPSRMNLIIRTYDDFRKRKIRRDQLVRKMREVAGDNLLAEIIKNHKNR 318

Query: 63  KK 64
            K
Sbjct: 319 NK 320


>AT1G32230.3 | Symbols: AtRCD1 | WWE protein-protein interaction
           domain protein family | chr1:11613427-11615748 FORWARD
           LENGTH=570
          Length = 570

 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 40/58 (68%)

Query: 1   MPFPTLISALSKVLPQPDIALLSRLHKAKQERKISRQELIQKVRQIAGDKLLTAVIKS 58
           MPFPTL +A+S  + + D+ L++  ++  +++K++R E ++K+R I GD LL + I +
Sbjct: 507 MPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVGDDLLRSTITT 564