Miyakogusa Predicted Gene
- Lj0g3v0324609.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0324609.1 Non Chatacterized Hit- tr|I1MIS0|I1MIS0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,80.78,0,TPR-like,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; no description,Tetratr,CUFF.22057.1
(588 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 682 0.0
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 236 4e-62
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 225 7e-59
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 225 7e-59
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 221 1e-57
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 6e-54
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 1e-52
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 4e-52
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 5e-52
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 202 6e-52
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 6e-52
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 7e-52
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 200 3e-51
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 9e-51
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 1e-50
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 5e-50
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 194 2e-49
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 4e-49
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 2e-48
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 3e-48
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 8e-48
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 3e-47
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 6e-47
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 6e-47
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 8e-47
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 6e-46
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 182 8e-46
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 181 1e-45
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 8e-45
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 4e-44
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 5e-44
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 7e-44
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 5e-43
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 172 6e-43
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 170 2e-42
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 6e-41
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 8e-41
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 164 2e-40
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 6e-39
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 9e-39
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 9e-39
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 6e-38
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 8e-38
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 154 1e-37
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 154 2e-37
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 3e-37
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 4e-37
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 8e-37
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 9e-37
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 150 2e-36
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 3e-36
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 4e-35
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 146 4e-35
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 144 2e-34
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 7e-34
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 1e-33
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 140 2e-33
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 140 2e-33
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 4e-33
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 5e-33
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 1e-32
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 1e-31
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 4e-31
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 132 5e-31
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 6e-31
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 130 4e-30
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 128 1e-29
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 128 1e-29
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 8e-28
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 9e-28
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 119 4e-27
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 119 5e-27
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 3e-25
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 113 4e-25
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 108 8e-24
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 100 3e-21
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 100 3e-21
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 100 5e-21
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 99 8e-21
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 97 3e-20
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 96 8e-20
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 96 9e-20
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 95 1e-19
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 95 1e-19
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 94 4e-19
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 92 1e-18
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 91 2e-18
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 90 4e-18
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 90 5e-18
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 89 6e-18
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 89 8e-18
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 88 2e-17
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 2e-17
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 86 5e-17
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 7e-17
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 85 1e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 85 1e-16
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 84 2e-16
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 84 3e-16
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 84 3e-16
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 83 6e-16
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 83 7e-16
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 83 7e-16
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 80 6e-15
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 80 6e-15
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 79 6e-15
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 79 1e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 77 5e-14
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 77 5e-14
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 75 9e-14
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 74 3e-13
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 73 4e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 73 4e-13
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 69 7e-12
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 68 2e-11
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 68 2e-11
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 68 2e-11
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 67 4e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 61 2e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 60 3e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 59 8e-09
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 59 8e-09
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 59 8e-09
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 57 3e-08
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-08
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 54 4e-07
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 53 5e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-05
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/590 (56%), Positives = 442/590 (74%), Gaps = 7/590 (1%)
Query: 2 VLIENQRQFI-DGVCAIIVKGHWGNLLKVN-NAPVLSSTTIHQVLLQLSL-NGYG-PSIS 57
+L N+ I +CA ++KG+W N+LK ++ +L S QV+ +LSL +GYG PS+S
Sbjct: 4 LLSANREALIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLS 63
Query: 58 FPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXX-XXXXXXXX 116
+ FF W +S P HSLQ SW MI IL K+KHFKTA Q+LDK+A R+
Sbjct: 64 WSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVG 123
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
+ +DPE S V SWL+I+YAK+ M D++ VFEQ+R LKPHL ACTVLL+SL+K
Sbjct: 124 GVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRL 183
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
T+ VWKI K++V+ GVV NI++YN L+HACSKS D E+A++LL+EMEEKGV PDIFTYNT
Sbjct: 184 TDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNT 243
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD-A 295
LIS+YCKK MH+EALS+QD+MER G+ +IV+YNS I+GF +EGRMREATR+F EIKD
Sbjct: 244 LISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDV 303
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
T NHVTYTTLIDGYC+ N++D+AL++RE+ME++G PGV TYNSILRKLC+DGRIR+AN+
Sbjct: 304 TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANR 363
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
LL EMS KK++ DNITCNTLINAY KI D+ SA+K K KM+ESGLK D ++YKALIHGFC
Sbjct: 364 LLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFC 423
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
K+ ELE+AKE LF M++ GF+P Y +YSW+VDG+ ++ D I L +EF +GLC D +
Sbjct: 424 KVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA 483
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+YR LIRR+CK+EQ++ A+ LF ME G+ GDSVI+T++AYAYW++GK + AS + + M
Sbjct: 484 LYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Query: 536 AKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVERGLMSRNTMRKIQQ 585
RRL++ K+Y S G+N V + FW HV +R L+S++ +R++ +
Sbjct: 544 YNRRLMVNLKLYKSISASYA-GDNDVLRFFWSHVGDRCLISKSILREMNR 592
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 254/497 (51%), Gaps = 4/497 (0%)
Query: 34 VLSSTTIHQVLLQLSLNGYG-PSIS-FPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFK 91
VL S ++H V+ ++ N P S F FFK++ S P + +++ + + + LA ++ F
Sbjct: 76 VLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFT 135
Query: 92 TAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQ 151
AQ +++ + R + ++ L+I Y DA+Q F
Sbjct: 136 EAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRL 195
Query: 152 MRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRD 211
R ++ + C LL ++K T +W + ++ G LN+Y++N L++ K +
Sbjct: 196 SRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGN 255
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNS 271
+ A+++ +E+ ++ + P + ++NTLI+ YCK G E ++ +ME+ D+ +Y++
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 272 LIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKG 329
LI CKE +M A +F E+ + PN V +TTLI G+ + E+D + + M +KG
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 330 LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
L P + YN+++ C++G + A +++ M + ++ D IT TLI+ + + GD+++AL
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETAL 435
Query: 390 KFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGY 449
+ + +M ++G++ D + AL+ G CK + A+ L ML AG P +Y+ ++D +
Sbjct: 436 EIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAF 495
Query: 450 CKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDS 509
CKK + L E S G Y L+ LCK+ Q++ A+ L M G+ D
Sbjct: 496 CKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDD 555
Query: 510 VIYTSLAYAYWKSGKTS 526
+ Y +L + + +S
Sbjct: 556 ITYNTLLEGHHRHANSS 572
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 156/277 (56%), Gaps = 2/277 (0%)
Query: 261 GINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQA 318
G L++ +N L+ FCKEG + +A ++F EI + P V++ TLI+GYCK LD+
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 319 LKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
+++ ME P V TY++++ LC++ ++ A+ L +EM ++ + +++ TLI+
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 379 YSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPS 438
+S+ G++ + KML GL+PD Y L++GFCK +L +A+ ++ GM+ G P
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 439 YCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFY 498
+Y+ ++DG+C+ +V+ L + E G+ LD + AL+ +CK ++ AE+
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 499 HMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
M GI D V YT + A+ K G +L+EM
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 36/250 (14%)
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
E+++A G V +N ++ K C++G I DA K+ +E++++ +Q ++ NTLIN Y K+
Sbjct: 230 EILDA-GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA------------------- 423
G+L + K++M +S +PD FTY ALI+ CK ++++ A
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348
Query: 424 ----------------KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
KE ML G P Y+ +V+G+CK ++ A + D +
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR 408
Query: 468 KGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSV 527
+GL D Y LI C+ +E A ++ M+ NGI D V +++L K G+
Sbjct: 409 RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468
Query: 528 ASNVLEEMAK 537
A L EM +
Sbjct: 469 AERALREMLR 478
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%)
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
N L+N + K G++ A K +++ + L+P ++ LI+G+CK+ L+ L M
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
+ P +YS +++ CK++ +D L DE +GL + ++ LI + +I+
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
++ + M G+ D V+Y +L + K+G A N+++ M +R L
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
C L++ K+ + F ++L++G + + + L++ FCK + A+++ +
Sbjct: 208 CGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEIT 267
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
P+ S++ +++GYCK N+D L + D Y ALI LCK +++
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFS 551
A LF M G+ + VI+T+L + + ++G+ + ++M + L +Y+ +
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYN--T 385
Query: 552 VPDG---HGENKVSQMFWDHVVERGL 574
+ +G +G+ ++ D ++ RGL
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGL 411
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 247/494 (50%), Gaps = 7/494 (1%)
Query: 60 FFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHR--DFXXXXXXXXXXXR 117
F W + PH +L+C + IL K+K +KTAQ + + +A + D
Sbjct: 68 FLNW--ANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQE 125
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG-T 176
+D S V +V Y++ + AL + + + P + + +L + ++
Sbjct: 126 TYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRN 185
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ + K +++ V N++ YN LI + +++ A L ++ME KG +P++ TYNT
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KD 294
LI YCK + + M +G+ +++SYN +I G C+EGRM+E + + +E+ +
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
+ + VTY TLI GYCK QAL + M GL P V TY S++ +C+ G + A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
+ L++M + + + T TL++ +S+ G + A + +M ++G P TY ALI+G
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
C ++E A +L M + G +P SYS ++ G+C+ +VD L + E + KG+ D
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
Y +LI+ C+ + + A L+ M G+ D YT+L AY G A + E
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 535 MAKRRLIITAKIYS 548
M ++ ++ YS
Sbjct: 546 MVEKGVLPDVVTYS 559
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 220/460 (47%), Gaps = 52/460 (11%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG--------- 175
N + L+ Y K R D ++ M L L+P+L + V+++ L ++G
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 176 -------------TTNVVWK-------------IHKRLVQDGVVLNIYIYNCLIHACSKS 209
T N + K +H +++ G+ ++ Y LIH+ K+
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 210 RDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSY 269
++ RA + L++M +G+ P+ TY TL+ + +KG EA + +M G + +V+Y
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 270 NSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEA 327
N+LI G C G+M +A + ++K+ +P+ V+Y+T++ G+C++ ++D+AL+V+ M
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 328 KGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKS 387
KG+ P TY+S+++ C+ R ++A L EM + D T LINAY GDL+
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 388 ALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVD 447
AL+ N+M+E G+ PD TY LI+G K AK LL + PS +Y +++
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 448 ---------------GYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
G+C K + + + L K D + Y +I C+ I
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVL 532
A L+ M +G +V +L A K GK + ++V+
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 142/299 (47%), Gaps = 19/299 (6%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
P+V S S ++ + +S +AL+V +M +KP + L+ + T
Sbjct: 448 PDVVS--YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+++ +++ G+ + + Y LI+A D+E+A QL NEM EKGV+PD+ TY+ LI+
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 242 CKKGMHYEALSIQDKMEREG---------------INLDIVSYNSLIYGFCKEGRMREAT 286
K+ EA + K+ E N++ S SLI GFC +G M EA
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 287 RMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL 344
++F + K+ P+ Y +I G+C+A ++ +A + + M G T ++++ L
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Query: 345 CQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD 403
++G++ + N ++ + ++ L+ + G++ L +M + G P+
Sbjct: 686 HKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 151/582 (25%), Positives = 267/582 (45%), Gaps = 74/582 (12%)
Query: 68 PHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQ 127
P++ H+ AMI IL + AQ L ++ R + N
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
V L+ Y ++R ++A + F +R + AC L+ SL++ G + W +++ +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
+ GV +N+Y N +++A K +E+ L++++EKGV PDI TYNTLIS Y KG+
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 248 YEALSIQD-----------------------------------KMEREGINLDIVSYNSL 272
EA + + +M R G++ D +Y SL
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 273 IYGFCKEGRMREATRMFSE-----------------------------------IKDA-- 295
+ CK+G + E ++FS+ +K+A
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P++V YT LI GYC+ + A+ +R M +G V TYN+IL LC+ + +A+K
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
L NEM+E+ + D+ T LI+ + K+G+L++A++ KM E ++ D TY L+ GF
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
K+ ++++AKE+ M+ P+ SYS +V+ C K ++ + DE +SK +
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ ++I+ C+ E M G D + Y +L Y + + S A ++++M
Sbjct: 587 ICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Query: 536 AKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVERGLMSR 577
+ + + +++ S+ HG + +QM VV R ++ R
Sbjct: 647 EEEQGGLVPDVFTYNSIL--HGFCRQNQMKEAEVVLRKMIER 686
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 180/342 (52%), Gaps = 4/342 (1%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+ +S AL F ++ L P T+L+ + G +V + ++Q G ++
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ YN ++H K + + A +L NEM E+ + PD +T LI +CK G A+ +
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKAN 313
KM+ + I LD+V+YN+L+ GF K G + A +++++ K+ P ++Y+ L++ C
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
L +A +V + M +K + P V NS+++ C+ G D L +M + D I+ N
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 374 TLINAYSKIGDLKSALKFKNKMLE--SGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
TLI + + ++ A KM E GL PD FTY +++HGFC+ ++++ A+ +L M+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLD 473
+ G P +Y+ +++G+ +DN+ + DE L +G D
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 203/400 (50%), Gaps = 4/400 (1%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
+ A +VF +M L P LL K G K+ + VV ++ ++ +
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
+ ++S ++++A N ++E G++PD Y LI YC+KGM A++++++M ++G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQALK 320
+D+V+YN++++G CK + EA ++F+E+ + P+ T T LIDG+CK L A++
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ + M+ K + V TYN++L + G I A ++ +M K++ I+ + L+NA
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
G L A + ++M+ +KP ++I G+C+ + L M+ GF P
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSK--GLCLDASVYRALIRRLCKIEQIECAEKLFY 498
SY+ ++ G+ +++N+ L + + GL D Y +++ C+ Q++ AE +
Sbjct: 622 SYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLR 681
Query: 499 HMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
M G++ D YT + + + A + +EM +R
Sbjct: 682 KMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 127/250 (50%), Gaps = 6/250 (2%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
+S L+ L+ + K Q+A+++F++M+ +++ + LL K G + +I
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 185 KRLVQDGVVLNIYIYNCLIHA-CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
+V ++ Y+ L++A CSK E A ++ +EM K + P + N++I YC+
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAE-AFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREA----TRMFSEIKDATPNH 299
G + S +KM EG D +SYN+LIYGF +E M +A +M E P+
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
TY +++ G+C+ N++ +A V M +G+ P +TY ++ + +A ++ +E
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 360 MSEKKVQADN 369
M ++ D+
Sbjct: 718 MLQRGFSPDD 727
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/552 (27%), Positives = 255/552 (46%), Gaps = 44/552 (7%)
Query: 25 NLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTP--HYTHSLQCSWAMIQ 82
N+L ++ L+ Q L+L ++G ++ F KWV P H +Q
Sbjct: 65 NILTIDRWGSLNHMDYRQARLRL-VHG---KLALKFLKWVVKQPGLETDHIVQLVCITTH 120
Query: 83 ILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMT 142
IL + + + A+ +L +++ + N V L+ Y + M
Sbjct: 121 ILVRARMYDPARHILKELSLMS-GKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMI 179
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
QD+L++F M LY P + C +L S++K G VW K +++ + ++ +N L
Sbjct: 180 QDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNIL 239
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
I+ E++ L+ +ME+ G P I TYNT++ YCKKG A+ + D M+ +G+
Sbjct: 240 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 299
Query: 263 NLDI-----------------------------------VSYNSLIYGFCKEGRMREATR 287
+ D+ V+YN+LI GF EG++ A++
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 359
Query: 288 MFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
+ +E+ +PNHVT+ LIDG+ +ALK+ +MEAKGL P +Y +L LC
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
++ A M V IT +I+ K G L A+ N+M + G+ PD
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
TY ALI+GFCK+ ++AKE++ + G +P+ YS ++ C+ + + + +
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKT 525
+ +G D + L+ LCK ++ AE+ M +GI ++V + L Y SG+
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599
Query: 526 SVASNVLEEMAK 537
A +V +EM K
Sbjct: 600 LKAFSVFDEMTK 611
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 209/453 (46%), Gaps = 11/453 (2%)
Query: 126 SQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK 185
+ VL W Y K + A+++ + M+ + + +L+ L + + + +
Sbjct: 272 NTVLHW----YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 327
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
+ + + N YN LI+ S V A QLLNEM G+ P+ T+N LI + +G
Sbjct: 328 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 387
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYT 303
EAL + ME +G+ VSY L+ G CK A + +K +TYT
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 304 TLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
+IDG CK LD+A+ + M G+ P + TY++++ C+ GR + A +++ +
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
+ + I +TLI ++G LK A++ M+ G D FT+ L+ CK ++ A
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
+E + M G P+ S+ +++GY ++ DE G Y +L++
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIIT 543
LCK + AEK + + D+V+Y +L A KSG + A ++ EM +R ++
Sbjct: 628 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687
Query: 544 AKIYSCFSVPDG---HGENKVSQMFWDHVVERG 573
+ Y+ S+ G G+ ++ +F RG
Sbjct: 688 SYTYT--SLISGLCRKGKTVIAILFAKEAEARG 718
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 169/356 (47%), Gaps = 2/356 (0%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
N +Y+ LI + ++ + ++ M G P ++T N ++ K G S
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKA 312
+M + I D+ ++N LI C EG +++ + +++ + P VTY T++ YCK
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
A+++ + M++KG+ V TYN ++ LC+ RI LL +M ++ + + +T
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
NTLIN +S G + A + N+ML GL P+ T+ ALI G + A ++ + M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
G TPS SY ++DG CK D G+C+ Y +I LCK ++
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
A L M +GI D V Y++L + K G+ A ++ + + L IYS
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 208/500 (41%), Gaps = 55/500 (11%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
A+I K FKTA++++ +I R+ P N + S L+ + +
Sbjct: 483 ALINGFCKVGRFKTAKEIVCRI---------------YRVGLSP--NGIIYSTLIYNCCR 525
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
++A++++E M L VL++SL K G + + + DG++ N
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
++CLI+ S + +A + +EM + G P FTY +L+ CK G EA +
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEI-------------------------- 292
+D V YN+L+ CK G + +A +F E+
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Query: 293 ------------KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSI 340
+ PN V YT +DG KA + + RE M+ G P + T N++
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765
Query: 341 LRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGL 400
+ + G+I N LL EM + + T N L++ YSK D+ ++ ++ +G+
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825
Query: 401 KPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILA 460
PD T +L+ G C+ + LE ++L + G +++ ++ C ++
Sbjct: 826 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 885
Query: 461 LPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYW 520
L S G+ LD A++ L + + + + + + M GIS +S Y L
Sbjct: 886 LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 945
Query: 521 KSGKTSVASNVLEEMAKRRL 540
+ G A V EEM ++
Sbjct: 946 RVGDIKTAFVVKEEMIAHKI 965
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 187/432 (43%), Gaps = 38/432 (8%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A Q+ +M + L P+ L+ + +G K+ + G+ + Y L+
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
K+ + + A+ M+ GV TY +I CK G EA+ + ++M ++GI+
Sbjct: 417 GLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDP 476
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVR 322
DIV+Y++LI GFCK GR + A + I +PN + Y+TLI C+ L +A+++
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
E M +G T+N ++ LC+ G++ +A + + M+ + + ++ + LIN Y
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNS 596
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL--------------- 427
G+ A ++M + G P FTY +L+ G CK L A++ L
Sbjct: 597 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 656
Query: 428 -------------------FG-MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
FG M+ P +Y+ ++ G C+K + E +
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 716
Query: 468 KGLCLDASV-YRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTS 526
+G L V Y + + K Q + M+ G + D V ++ Y + GK
Sbjct: 717 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776
Query: 527 VASNVLEEMAKR 538
+++L EM +
Sbjct: 777 KTNDLLPEMGNQ 788
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/542 (22%), Positives = 226/542 (41%), Gaps = 63/542 (11%)
Query: 49 LNGYGPS----ISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRD 104
+NGYG S +F F + H+ + ++++ L K H + A++ L +
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTKVGHHP-TFFTYGSLLKGLCKGGHLREAEKFLKSL---- 644
Query: 105 FXXXXXXXXXXXRIHDDPE-VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPA 163
H P V++ + + L+ KS A+ +F +M + P
Sbjct: 645 --------------HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690
Query: 164 CTVLLSSLLKDGTTNVVWKIHKRLVQDGVVL-NIYIYNCLIHACSKSRDVERAKQLLNEM 222
T L+S L + G T + K G VL N +Y C + K+ + +M
Sbjct: 691 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 750
Query: 223 EEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRM 282
+ G PDI T N +I Y + G + + +M + ++ +YN L++G+ K +
Sbjct: 751 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 810
Query: 283 REATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSI 340
+ ++ I P+ +T +L+ G C++N L+ LK+ + +G+ T+N +
Sbjct: 811 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 870
Query: 341 LRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGL 400
+ K C +G I A L+ M+ + D TC+ +++ ++ + + ++M + G+
Sbjct: 871 ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 930
Query: 401 KPDPFTYKALIHGFCKMDELESA---KE-------------------------------- 425
P+ Y LI+G C++ ++++A KE
Sbjct: 931 SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 990
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
LL ML P+ S++ ++ CK NV L L + GL LD Y LI LC
Sbjct: 991 LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1050
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYW-KSGKTSVASNVLEEMAKRRLIITA 544
+ A +L+ M+G+G ++ Y +L + S A +L+++ R I +
Sbjct: 1051 AKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSM 1110
Query: 545 KI 546
+
Sbjct: 1111 SL 1112
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 222/432 (51%), Gaps = 4/432 (0%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
P+V S S +V Y + ++ E M+ LKP+ ++ L +
Sbjct: 279 PDVIS--YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+ +++ G++ + +Y LI K D+ A + EM + + PD+ TY +IS +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNH 299
C+ G EA + +M +G+ D V++ LI G+CK G M++A R+ + + A +PN
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
VTYTTLIDG CK +LD A ++ M GL P + TYNSI+ LC+ G I +A KL+ E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
+ AD +T TL++AY K G++ A + +ML GL+P T+ L++GFC
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
LE ++LL ML G P+ +++ +V YC ++N+ A A+ + S+G+ D Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
L++ CK ++ A LF M+G G S Y+ L + K K A V ++M +
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 540 LIITAKIYSCFS 551
L +I+ FS
Sbjct: 697 LAADKEIFDFFS 708
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 238/500 (47%), Gaps = 17/500 (3%)
Query: 60 FFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRI- 118
FF W S +L+ +I + K K AQ ++ R +
Sbjct: 107 FFDWARS--RRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLL 164
Query: 119 -------HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSL 171
DP V LV + ++A +VFE+M Y L + +C V L+ L
Sbjct: 165 VYTYKDWGSDPRVFDVFFQVLV----DFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRL 220
Query: 172 LKDG-TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPD 230
KD T + + + GV N+ YN +IH + ++ A LL ME KG PD
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
+ +Y+T+++ YC+ G + + + M+R+G+ + Y S+I C+ ++ EA FS
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 291 EI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
E+ + P+ V YTTLIDG+CK ++ A K M ++ + P V TY +I+ CQ G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
+ +A KL +EM K ++ D++T LIN Y K G +K A + N M+++G P+ TY
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 409 ALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSK 468
LI G CK +L+SA ELL M G P+ +Y+ IV+G CK N++ + L EF +
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 469 GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
GL D Y L+ CK +++ A+++ M G G+ V + L + G
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 529 SNVLEEMAKRRLIITAKIYS 548
+L M + + A ++
Sbjct: 581 EKLLNWMLAKGIAPNATTFN 600
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 191/400 (47%), Gaps = 2/400 (0%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A + F +M + P T L+ K G K + + ++ Y +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
+ D+ A +L +EM KG+ PD T+ LI+ YCK G +A + + M + G +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKV 321
++V+Y +LI G CKEG + A + E+ PN TY ++++G CK+ +++A+K+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
EA GL TY +++ C+ G + A ++L EM K +Q +T N L+N +
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
G L+ K N ML G+ P+ T+ +L+ +C + L++A + M G P +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 442 YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
Y +V G+CK N+ L E KG + S Y LI+ K ++ A ++F M
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 502 GNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
G++ D I+ + +K + + ++E+ + L+
Sbjct: 694 REGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 222/432 (51%), Gaps = 4/432 (0%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
P+V S S +V Y + ++ E M+ LKP+ ++ L +
Sbjct: 279 PDVIS--YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+ +++ G++ + +Y LI K D+ A + EM + + PD+ TY +IS +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNH 299
C+ G EA + +M +G+ D V++ LI G+CK G M++A R+ + + A +PN
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
VTYTTLIDG CK +LD A ++ M GL P + TYNSI+ LC+ G I +A KL+ E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
+ AD +T TL++AY K G++ A + +ML GL+P T+ L++GFC
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
LE ++LL ML G P+ +++ +V YC ++N+ A A+ + S+G+ D Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
L++ CK ++ A LF M+G G S Y+ L + K K A V ++M +
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 540 LIITAKIYSCFS 551
L +I+ FS
Sbjct: 697 LAADKEIFDFFS 708
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 238/500 (47%), Gaps = 17/500 (3%)
Query: 60 FFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRI- 118
FF W S +L+ +I + K K AQ ++ R +
Sbjct: 107 FFDWARS--RRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLL 164
Query: 119 -------HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSL 171
DP V LV + ++A +VFE+M Y L + +C V L+ L
Sbjct: 165 VYTYKDWGSDPRVFDVFFQVLV----DFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRL 220
Query: 172 LKDG-TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPD 230
KD T + + + GV N+ YN +IH + ++ A LL ME KG PD
Sbjct: 221 SKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPD 280
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
+ +Y+T+++ YC+ G + + + M+R+G+ + Y S+I C+ ++ EA FS
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 291 EI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
E+ + P+ V YTTLIDG+CK ++ A K M ++ + P V TY +I+ CQ G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
+ +A KL +EM K ++ D++T LIN Y K G +K A + N M+++G P+ TY
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 409 ALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSK 468
LI G CK +L+SA ELL M G P+ +Y+ IV+G CK N++ + L EF +
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 469 GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
GL D Y L+ CK +++ A+++ M G G+ V + L + G
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 529 SNVLEEMAKRRLIITAKIYS 548
+L M + + A ++
Sbjct: 581 EKLLNWMLAKGIAPNATTFN 600
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 191/400 (47%), Gaps = 2/400 (0%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A + F +M + P T L+ K G K + + ++ Y +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
+ D+ A +L +EM KG+ PD T+ LI+ YCK G +A + + M + G +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKV 321
++V+Y +LI G CKEG + A + E+ PN TY ++++G CK+ +++A+K+
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
EA GL TY +++ C+ G + A ++L EM K +Q +T N L+N +
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
G L+ K N ML G+ P+ T+ +L+ +C + L++A + M G P +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 442 YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
Y +V G+CK N+ L E KG + S Y LI+ K ++ A ++F M
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 502 GNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
G++ D I+ + +K + + ++E+ + L+
Sbjct: 694 REGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLV 733
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 212/406 (52%), Gaps = 2/406 (0%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
LV K + + L++ ++M + P A + L+ L K G + KR+V G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
V N+++YN LI + K R A+ L + M + G+ P+ TY+ LI ++C++G AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGY 309
S +M G+ L + YNSLI G CK G + A +E+ K P VTYT+L+ GY
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
C ++++AL++ M KG+ P + T+ ++L L + G IRDA KL NEM+E V+ +
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
+T N +I Y + GD+ A +F +M E G+ PD ++Y+ LIHG C + AK + G
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
+ + Y+ ++ G+C++ ++ L++ E + +G+ LD Y LI K +
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 490 IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ L M G+ D VIYTS+ A K+G A + + M
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/544 (25%), Positives = 256/544 (47%), Gaps = 10/544 (1%)
Query: 4 IENQRQFIDGVCAIIV-KGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGY--GPSISFPF 60
I +QF+D V I+ K W ++ + L S + V ++ L G P + F
Sbjct: 35 IAEDKQFVDAVKRIVRGKRSW----EIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRF 90
Query: 61 FKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHD 120
F ++ + HS +I L K F A +L + R
Sbjct: 91 FNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEK 150
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNV 179
+S L+ HY +SR D + VF+ M L P + + LL L+K +
Sbjct: 151 CKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGL 210
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
++ +V G+ ++YIY +I + + +D+ RAK+++ ME G +I YN LI
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATP 297
CKK +EA+ I+ + + + D+V+Y +L+YG CK M E+ +P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
+ ++L++G K ++++AL + + + G+ P + YN+++ LC+ + +A L
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 358 NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
+ M + ++ +++T + LI+ + + G L +AL F +M+++GLK + Y +LI+G CK
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 418 DELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVY 477
++ +A+ + M++ P+ +Y+ ++ GYC K ++ L L E KG+ +
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 478 RALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
L+ L + I A KLF M + + V Y + Y + G S A L+EM +
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 538 RRLI 541
+ ++
Sbjct: 571 KGIV 574
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 222/528 (42%), Gaps = 107/528 (20%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N V + L+ K R +A +F++M L+P+ ++L+ + G +
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+V G+ L++Y YN LI+ K D+ A+ + EM K + P + TY +L+ YC K
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTY 302
G +AL + +M +GI I ++ +L+ G + G +R+A ++F+E+ + PN VTY
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYP---------------GVAT----------- 336
+I+GYC+ ++ +A + + M KG+ P G A+
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 337 ---------YNSILRKLCQDGRIRDANK-------------------------------- 355
Y +L C++G++ +A
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 356 ---LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
LL EM ++ ++ D++ ++I+A SK GD K A + M+ G P+ TY A+I+
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 413 GFCKMDELESAKELLFGM---------------LD--------------------AGFTP 437
G CK + A+ L M LD G
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
+ +Y+ ++ G+C++ ++ L + G+ D Y +I LC+ ++ A +L+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 498 YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAK 545
M GI D V Y +L + +G+ A+ + EM ++ LI K
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 2/289 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E+N + L+ + + ++AL V ++M + L VL+ LK + +
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFG 668
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ K + G+ + IY +I A SK+ D + A + + M +G VP+ TY +I+ C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCK-EGRMREATRMFSEI-KDATPNHV 300
K G EA + KM+ + V+Y + K E M++A + + I K N
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TY LI G+C+ +++A ++ M G+ P TY +++ +LC+ ++ A +L N M
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
+EK ++ D + NTLI+ G++ A + +N+ML GL P+ T +
Sbjct: 849 TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 134/292 (45%), Gaps = 8/292 (2%)
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P T + L+ G K A+++ M + G+ P V Y ++R LC+ + A ++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
+ M + + N LI+ K + A+ K + LKPD TY L++G CK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
+ E E E++ ML F+PS + S +V+G K+ ++ L L + G+ + V
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 477 YRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
Y ALI LCK + AE LF M G+ + V Y+ L + + GK A + L EM
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 537 KRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVERGLMSRNTMRKIQQMLI 588
L ++ +Y S+ +GH + F D G M+ +K++ ++
Sbjct: 430 DTGLKLS--VYPYNSLINGHCK------FGDISAAEGFMAEMINKKLEPTVV 473
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 151/529 (28%), Positives = 255/529 (48%), Gaps = 44/529 (8%)
Query: 35 LSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQ 94
L+ + +VL++L + P ++F FFKW + + HS++ + IL + + A
Sbjct: 106 LAPIWVPRVLVELKED---PKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDAN 162
Query: 95 QMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRL 154
+L ++ R P V L M ++A+Q F +M+
Sbjct: 163 SVLKEMVLSKADCDVFDVLWSTRNVCVPGFG--VFDALFSVLIDLGMLEEAIQCFSKMKR 220
Query: 155 YQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVER 214
+++ P +C LL K G T+ V
Sbjct: 221 FRVFPKTRSCNGLLHRFAKLGKTDDV---------------------------------- 246
Query: 215 AKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIY 274
K+ +M G P +FTYN +I CK+G A + ++M+ G+ D V+YNS+I
Sbjct: 247 -KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 275 GFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP 332
GF K GR+ + F E+KD P+ +TY LI+ +CK +L L+ M+ GL P
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 333 GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFK 392
V +Y++++ C++G ++ A K +M + + T +LI+A KIG+L A +
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 393 NKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKK 452
N+ML+ G++ + TY ALI G C + ++ A+EL M AG P+ SY+ ++ G+ K
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 453 DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
N+D L L +E +G+ D +Y I LC +E+IE A+ + M+ GI +S+IY
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 513 TSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKV 561
T+L AY+KSG + ++L+EM + L I + + + DG +NK+
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEM--KELDIEVTVVTFCVLIDGLCKNKL 592
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 217/450 (48%), Gaps = 38/450 (8%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
++ + K D + FE+M+ +P + L++ K G + + ++ + +G
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 362
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ N+ Y+ L+ A K +++A + +M G+VP+ +TY +LI CK G +A
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGY 309
+ ++M + G+ ++V+Y +LI G C RM+EA +F ++ A PN +Y LI G+
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
KA +D+AL++ ++ +G+ P + Y + + LC +I A ++NEM E ++A++
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 370 ITCNTLINAYSKIGDLKSALKF------------------------KNKML--------- 396
+ TL++AY K G+ L KNK++
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 397 ---ESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
+ GL+ + + A+I G CK +++E+A L M+ G P +Y+ ++DG K+
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
NV LAL D+ G+ LD Y +L+ L Q++ A M G GI D V+
Sbjct: 663 NVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCI 722
Query: 514 SLAYAYWKSGKTSVASNVLEEMAKRRLIIT 543
S+ +++ G A + + K +L+ +
Sbjct: 723 SVLKKHYELGCIDEAVELQSYLMKHQLLTS 752
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 159/346 (45%), Gaps = 38/346 (10%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S LV + K M Q A++ + MR L P+ T L+ + K G + +++ ++Q
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
GV N+ Y LI + ++ A++L +M+ GV+P++ +YN LI + K
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLID 307
AL + ++++ GI D++ Y + I+G C ++ A + +E+K+ N + YTTL+D
Sbjct: 491 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 550
Query: 308 GYCKANELDQALKVRELMEAK------------------------------------GLY 331
Y K+ + L + + M+ GL
Sbjct: 551 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 332 PGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
A + +++ LC+D ++ A L +M +K + D +L++ K G++ AL
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 670
Query: 392 KNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
++KM E G+K D Y +L+ G ++L+ A+ L M+ G P
Sbjct: 671 RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 221/430 (51%), Gaps = 5/430 (1%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
P+V++ + L+ ++ + A+ + E M Y L P T ++ +++G +
Sbjct: 187 PDVST--FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEME-EKGVVPDIFTYNTLISL 240
+I +++V+ G + N ++H K VE A + EM + G PD +T+NTL++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPN 298
CK G A+ I D M +EG + D+ +YNS+I G CK G ++EA + ++ +D +PN
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
VTY TLI CK N++++A ++ ++ +KG+ P V T+NS+++ LC R A +L
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD 418
EM K + D T N LI++ G L AL +M SG TY LI GFCK +
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 419 ELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
+ A+E+ M G + + +Y+ ++DG CK V+ L D+ + +G D Y
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
+L+ C+ I+ A + M NG D V Y +L K+G+ VAS +L + +
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 539 RLIITAKIYS 548
+ +T Y+
Sbjct: 605 GINLTPHAYN 614
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 211/417 (50%), Gaps = 4/417 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
E+ + L+ YA+ + + L V + M + LKP +L+ L+ + +V
Sbjct: 115 EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVE 174
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
H ++ G+ ++ +N LI A ++ + A +L +M G+VPD T+ T++ Y
Sbjct: 175 ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT---PN 298
++G AL I+++M G + VS N +++GFCKEGR+ +A E+ + P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
T+ TL++G CKA + A+++ ++M +G P V TYNS++ LC+ G +++A ++L+
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD 418
+M + + +T NTLI+ K ++ A + + G+ PD T+ +LI G C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 419 ELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
A EL M G P +Y+ ++D C K +D L + + G Y
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
LI CK + AE++F ME +G+S +SV Y +L KS + A+ ++++M
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 194/392 (49%), Gaps = 5/392 (1%)
Query: 126 SQVLSWLVIH-YAKSRMTQDALQVFEQMRLYQ-LKPHLPACTVLLSSLLKDGTTNVVWKI 183
S V +++H + K +DAL ++M P L++ L K G +I
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
++Q+G ++Y YN +I K +V+ A ++L++M + P+ TYNTLIS CK
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVT 301
+ EA + + +GI D+ ++NSLI G C R A +F E+ K P+ T
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
Y LID C +LD+AL + + ME G V TYN+++ C+ + R+A ++ +EM
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
V +++T NTLI+ K ++ A + ++M+ G KPD +TY +L+ FC+ +++
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
A +++ M G P +Y ++ G CK V+ L KG+ L Y +I
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Query: 482 RRLCKIEQIECAEKLFYHM-EGNGISGDSVIY 512
+ L + + A LF M E N D+V Y
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 198/456 (43%), Gaps = 62/456 (13%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNS--QVLSWLVIHY 136
++ L K H K A +++D + + DP+V + V+S L
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGY---------------DPDVYTYNSVISGL---- 340
Query: 137 AKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNI 196
K ++A++V +QM P+ L+S+L K+ ++ + L G++ ++
Sbjct: 341 CKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 400
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN--------------------- 235
+N LI +R+ A +L EM KG PD FTYN
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 236 --------------TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGR 281
TLI +CK EA I D+ME G++ + V+YN+LI G CK R
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 282 MREATRMFSE--IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNS 339
+ +A ++ + ++ P+ TY +L+ +C+ ++ +A + + M + G P + TY +
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
++ LC+ GR+ A+KLL + K + N +I + A+ +MLE
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 400 -LKPDPFTYKALIHGFCK-MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDA 457
PD +Y+ + G C + A + L +L+ GF P + S + +G +
Sbjct: 641 EAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET 700
Query: 458 ILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
++ L + + K + V ++++ L KI + + A
Sbjct: 701 LVKLVNMVMQKARFSEEEV--SMVKGLLKIRKFQDA 734
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 16/260 (6%)
Query: 290 SEIKDATPNHVTYTT----LIDGYCKANELDQALKVRELMEAK-GLYPGVATYNSILRKL 344
S I A+P+ ++ L+D + AL++ L K P A Y IL +L
Sbjct: 34 STISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRL 93
Query: 345 CQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML-ESGLKPD 403
+ G D K+L +M + + T LI +Y++ L + M+ E GLKPD
Sbjct: 94 GRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPD 153
Query: 404 PFTYKALIHGFC-----KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAI 458
Y +++ K+ E+ AK ++G+ P +++ ++ C+ +
Sbjct: 154 THFYNRMLNLLVDGNSLKLVEISHAKMSVWGI-----KPDVSTFNVLIKALCRAHQLRPA 208
Query: 459 LALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
+ + ++ S GL D + +++ + ++ A ++ M G S +V + +
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 519 YWKSGKTSVASNVLEEMAKR 538
+ K G+ A N ++EM+ +
Sbjct: 269 FCKEGRVEDALNFIQEMSNQ 288
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 233/505 (46%), Gaps = 12/505 (2%)
Query: 32 APVLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFK 91
P L STT+ ++ P+++F F ++ Y Q I +++K K
Sbjct: 70 TPSLVSTTLLSLV-------KTPNLAFNFVNHID---LYRLDFQTQCLAIAVISKLSSPK 119
Query: 92 TAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYA-KSRMTQDALQVFE 150
Q+L ++ HD E S +L L++ + RM +A++ F
Sbjct: 120 PVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFY 179
Query: 151 QMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSR 210
M+ P C +L+ L + W + + + + N+Y +N +I+ K
Sbjct: 180 LMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEG 239
Query: 211 DVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYN 270
+++AK L ME G+ P I TYNTL+ + +G A I +M+ +G D+ +YN
Sbjct: 240 KLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYN 299
Query: 271 SLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGL 330
++ C EGR E R EI P+ V+Y LI G +L+ A R+ M +G+
Sbjct: 300 PILSWMCNEGRASEVLREMKEI-GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM 358
Query: 331 YPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK 390
P TYN+++ L + +I A L+ E+ EK + D++T N LIN Y + GD K A
Sbjct: 359 VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFA 418
Query: 391 FKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYC 450
++M+ G++P FTY +LI+ C+ ++ A EL ++ G P + ++DG+C
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478
Query: 451 KKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSV 510
N+D +L E + D Y L+R LC + E A +L M+ GI D +
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 511 IYTSLAYAYWKSGKTSVASNVLEEM 535
Y +L Y K G T A V +EM
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEM 563
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 179/339 (52%), Gaps = 12/339 (3%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
D + + +LSW+ S +V +M+ L P + +L+ +G +
Sbjct: 294 DMQTYNPILSWMCNEGRAS-------EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
+ +V+ G+V Y YN LIH +E A+ L+ E+ EKG+V D TYN LI+
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPN 298
YC+ G +A ++ D+M +GI +Y SLIY C++ + REA +F ++ K P+
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
V TL+DG+C +D+A + + M+ + P TYN ++R LC +G+ +A +L+
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD 418
EM + ++ D+I+ NTLI+ YSK GD K A +++ML G P TY AL+ G K
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 419 ELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDA 457
E E A+ELL M G P+ S+ +++ N+DA
Sbjct: 587 EGELAEELLREMKSEGIVPNDSSFCSVIEAM---SNLDA 622
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 186/369 (50%), Gaps = 9/369 (2%)
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
H RL +L ++ L+ C + R V+ A + M+EKG P T N +++L +
Sbjct: 147 HDRLETKSTIL----FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSR 202
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVT 301
A M R I ++ ++N +I CKEG++++A E+ P VT
Sbjct: 203 LNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVT 262
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
Y TL+ G+ ++ A + M++KG P + TYN IL +C +GR A+++L EM
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMK 319
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
E + D+++ N LI S GDL+ A ++++M++ G+ P +TY LIHG +++E
Sbjct: 320 EIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE 379
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
+A+ L+ + + G +Y+ +++GYC+ + AL DE ++ G+ Y +LI
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 482 RRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
LC+ + A++LF + G G+ D V+ +L + G A ++L+EM +
Sbjct: 440 YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 542 ITAKIYSCF 550
Y+C
Sbjct: 500 PDDVTYNCL 508
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 175/349 (50%), Gaps = 7/349 (2%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
+ A + +M+ +P + +LS + +G + V + K + G+V + YN L
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVSYNIL 333
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI-SLYCKKGMHYEALSIQDKMEREG 261
I CS + D+E A +EM ++G+VP +TYNTLI L+ + + + I++ E+ G
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK-G 392
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
I LD V+YN LI G+C+ G ++A + E+ P TYT+LI C+ N+ +A
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
++ E + KG+ P + N+++ C G + A LL EM + D++T N L+
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
G + A + +M G+KPD +Y LI G+ K + + A + ML GF P+
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIE 488
+Y+ ++ G K + L E S+G+ + S + ++I + ++
Sbjct: 573 LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 115/224 (51%), Gaps = 2/224 (0%)
Query: 166 VLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEK 225
+L++ + G + +H ++ DG+ + Y LI+ + A +L ++ K
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461
Query: 226 GVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREA 285
G+ PD+ NTL+ +C G A S+ +M+ IN D V+YN L+ G C EG+ EA
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 286 TRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRK 343
+ E+K P+H++Y TLI GY K + A VR+ M + G P + TYN++L+
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKG 581
Query: 344 LCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKS 387
L ++ A +LL EM + + ++ + ++I A S + KS
Sbjct: 582 LSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKS 625
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 207/396 (52%), Gaps = 2/396 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
DA+ + ++M +P+ +L+ + K G T + ++ +++ + + L+ Y+
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I K ++ A L NEME KG DI TYNTLI +C G + + M +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
I+ ++V+++ LI F KEG++REA ++ E+ + PN +TY +LIDG+CK N L++A+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
++ +LM +KG P + T+N ++ C+ RI D +L EMS + V A+ +T NTL+ +
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
+ G L+ A K +M+ ++PD +YK L+ G C ELE A E+ + +
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
Y I+ G C VD L KG+ LDA Y +I LC+ + + A+ LF
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
M G + D + Y L A+ + A+ ++EEM
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 206/410 (50%), Gaps = 5/410 (1%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
DA+ +F M + P + L S++ K +V + K++ G+ +IY +
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I+ + R + A + ++ + G PD +NTL++ C + EAL + D+M G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQAL 319
+++ N+L+ G C G++ +A + + + PN VTY +++ CK+ + A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
++ ME + + Y+ I+ LC+DG + +A L NEM K +AD IT NTLI +
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
G K M++ + P+ T+ LI F K +L A +LL M+ G P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+Y+ ++DG+CK++ ++ + + D +SKG D + LI CK +I+ +LF
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL---IITAKI 546
M G+ ++V Y +L + +SGK VA + +EM RR+ I++ KI
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 209/413 (50%), Gaps = 2/413 (0%)
Query: 137 AKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNI 196
AK++ + L + +QM + + +++++ + + + ++++ G +
Sbjct: 99 AKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDT 158
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
I+N L++ V A +L++ M E G P + T NTL++ C G +A+ + D+
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANE 314
M G + V+Y ++ CK G+ A + ++ ++ + V Y+ +IDG CK
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
LD A + ME KG + TYN+++ C GR D KLL +M ++K+ + +T +
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
LI+++ K G L+ A + +M++ G+ P+ TY +LI GFCK + LE A +++ M+ G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
P +++ +++GYCK + +D L L E +G+ + Y L++ C+ ++E A+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
KLF M + D V Y L +G+ A + ++ K ++ + IY
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 209/422 (49%), Gaps = 2/422 (0%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
LS ++ + + R A ++ +P LL+ L + + ++ R+V
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ G + N L++ + V A L++ M E G P+ TY ++++ CK G
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTYTTLI 306
A+ + KME I LD V Y+ +I G CK+G + A +F+E IK + +TY TLI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
G+C A D K+ M + + P V T++ ++ ++G++R+A++LL EM ++ +
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
+ IT N+LI+ + K L+ A++ + M+ G PD T+ LI+G+CK + ++ EL
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
M G + +Y+ +V G+C+ ++ L E +S+ + D Y+ L+ LC
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 487 IEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKI 546
++E A ++F +E + + D IY + + + K A ++ + + + + A+
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 547 YS 548
Y+
Sbjct: 546 YN 547
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 180/384 (46%), Gaps = 37/384 (9%)
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
KS T A+++ +M +K ++++ L KDG+ + + + + G +I
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
YN LI + + +LL +M ++ + P++ T++ LI + K+G EA + +M
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANEL 315
+ GI + ++YNSLI GFCKE R+ EA +M + K P+ +T+ LI+GYCKAN +
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
D L++ M +G+ TYN++++ CQ G++ A KL EM ++V+ D ++ L
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHG---------------------- 413
++ G+L+ AL+ K+ +S ++ D Y +IHG
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 414 -------------FCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILA 460
C+ D L A L M + G P +Y+ ++ + D+
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE 599
Query: 461 LPDEFLSKGLCLDASVYRALIRRL 484
L +E S G D S + +I L
Sbjct: 600 LIEEMKSSGFPADVSTVKMVINML 623
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 2/290 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N S L+ + K ++A Q+ ++M + P+ L+ K+ ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
++ G +I +N LI+ K+ ++ +L EM +GV+ + TYNTL+ +C+
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP--NHVTY 302
G A + +M + DIVSY L+ G C G + +A +F +I+ + + Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+I G C A+++D A + + KG+ YN ++ +LC+ + A+ L +M+E
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
+ D +T N LI A+ D +A + +M SG D T K +I+
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 117/258 (45%), Gaps = 2/258 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N+ + L+ + K ++A+Q+ + M P + +L++ K + ++
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ + GV+ N YN L+ +S +E AK+L EM + V PDI +Y L+ C
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTY 302
G +AL I K+E+ + LDI Y +I+G C ++ +A +F +K + Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+I C+ + L +A + M +G P TYN ++R D A +L+ EM
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606
Query: 363 KKVQADNITCNTLINAYS 380
AD T +IN S
Sbjct: 607 SGFPADVSTVKMVINMLS 624
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%)
Query: 352 DANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI 411
DA L +M + + I N L +A +K + L +M G+ +T +I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 412 HGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC 471
+ FC+ +L A + ++ G+ P ++ +++G C + V L L D + G
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 472 LDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNV 531
L+ LC ++ A L M G + V Y + KSG+T++A +
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 532 LEEMAKRRLIITAKIYS 548
L +M +R + + A YS
Sbjct: 251 LRKMEERNIKLDAVKYS 267
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 130/534 (24%), Positives = 257/534 (48%), Gaps = 12/534 (2%)
Query: 14 VCAIIVKGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHS 73
+ +I K HW L ++ +++ QL + P + ++ W+ + S
Sbjct: 46 IADLIEKQHWSKL-----GVHVTDINPNELFRQLISSELDPDLCLRYYSWLVKNSDISVS 100
Query: 74 LQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLV 133
L+ ++ ++ LA K + + LD + D+ VNS + LV
Sbjct: 101 LELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLV 160
Query: 134 IHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVV 193
+ YA + + + F++ Y K +C L+ +LLK+ + V ++K +++ +
Sbjct: 161 LAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQ 220
Query: 194 LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK---KGMHYEA 250
N++ +N +I+A K+ + +A+ ++ +M+ G P++ +YNTLI YCK G Y+A
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDG 308
++ +M ++ ++ ++N LI GF K+ + + ++F E+ +D PN ++Y +LI+G
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQAD 368
C ++ +A+ +R+ M + G+ P + TYN+++ C++ +++A + + +
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 369 NITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLF 428
N LI+AY K+G + K +M G+ PD TY LI G C+ +E+AK+ LF
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK-LF 459
Query: 429 GMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIE 488
L + P ++ +++GYC+K L E GL Y +++ CK
Sbjct: 460 DQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 489 QIECAEKLFYHMEGN-GISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
++ A + ME + + Y L Y + GK A+ +L EM ++ L+
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 193/363 (53%), Gaps = 9/363 (2%)
Query: 123 EVNSQVLSWLVIHYA--KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
++ V ++ V+ A K+ A V E M++Y P++ + L+ K G +
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 181 WK---IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+K + K +V++ V N+ +N LI K ++ + ++ EM ++ V P++ +YN+L
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--A 295
I+ C G EA+S++DKM G+ ++++YN+LI GFCK ++EA MF +K A
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P Y LID YCK ++D ++E ME +G+ P V TYN ++ LC++G I A K
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
L ++++ K + D +T + L+ Y + G+ + A +M + GLKP TY ++ G+C
Sbjct: 458 LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 416 KMDELESAKELLFGM-LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
K L++A + M + + SY+ ++ GY +K ++ L +E L KGL +
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 475 SVY 477
Y
Sbjct: 577 ITY 579
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 166/322 (51%), Gaps = 18/322 (5%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+ +D N + L+ + K +++VF++M +KP++ + L++ L G
Sbjct: 288 VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKI 347
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ + ++V GV N+ YN LI+ K+ ++ A + ++ +G VP YN L
Sbjct: 348 SEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD-AT 296
I YCK G + +++++MEREGI D+ +YN LI G C+ G + A ++F ++
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P+ VT+ L++GYC+ E +A + + M GL P TYN +++ C++G ++ A +
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Query: 357 LNEMS-EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
+M E++++ + + N L+ YS+ G L+ A N+MLE GL P+ TY
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY-------- 579
Query: 416 KMDELESAKELLFGMLDAGFTP 437
E KE M+D GF P
Sbjct: 580 -----EIVKE---EMVDQGFVP 593
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 5/257 (1%)
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+E++ K + P V T+N ++ LC+ G++ A ++ +M + ++ NTLI+ Y K
Sbjct: 212 KEMIRRK-IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 382 IGD---LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPS 438
+G + A +M+E+ + P+ T+ LI GF K D L + ++ MLD P+
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 439 YCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFY 498
SY+ +++G C + +++ D+ +S G+ + Y ALI CK + ++ A +F
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 499 HMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVP-DGHG 557
++G G + +Y L AY K GK + EEM + ++ Y+C +G
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 558 ENKVSQMFWDHVVERGL 574
+ ++ +D + +GL
Sbjct: 451 NIEAAKKLFDQLTSKGL 467
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 125/235 (53%), Gaps = 4/235 (1%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ + K+ M ++AL +F ++ P +L+ + K G + + + + + ++G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+V ++ YNCLI ++ ++E AK+L +++ KG+ PD+ T++ L+ YC+KG +A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAA 490
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP---NHVTYTTLIDG 308
+ +M + G+ ++YN ++ G+CKEG ++ AT M ++++ N +Y L+ G
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
Y + +L+ A + M KGL P TY + ++ G + D L +S K
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTK 605
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 220/436 (50%), Gaps = 13/436 (2%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
+A+ + E+M + +P L +++ L K G ++ + ++ + + ++ IY+
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I + K R V+ A L EM+ KG+ PD+FTY++LIS C G +A + M
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
IN ++V++NSLI F KEG++ EA ++F E+ + PN VTY +LI+G+C + LD+A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
++ LM +K P V TYN+++ C+ ++ D +L +MS + + + +T TLI+ +
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
+ D +A +M+ G+ P+ TY L+ G CK +LE A + + + P
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+Y+ + +G CK V+ L KG+ D Y +I CK E A LF
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGEN 559
M+ +G DS Y +L A+ + G + ++ +++EM R A Y
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL---------- 595
Query: 560 KVSQMFWDHVVERGLM 575
V+ M D +++G +
Sbjct: 596 -VTDMLHDGRLDKGFL 610
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 213/414 (51%), Gaps = 2/414 (0%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
S L+ AK + + E+M + + +L ++++ L + + I +++
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMM 127
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ G +I N L++ + A L+++M E G PD T+ TL+ +
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLI 306
EA+++ ++M +G D+V+Y ++I G CK G A + ++++ + V Y+T+I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
D CK +D AL + M+ KG+ P V TY+S++ LC GR DA++LL++M E+K+
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
+ +T N+LI+A++K G L A K ++M++ + P+ TY +LI+GFC D L+ A+++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
M+ P +Y+ +++G+CK V + L + +GL + Y LI +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 487 IEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
+ A+ +F M +G+ + + Y +L K+GK A V E + K ++
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 194/393 (49%), Gaps = 7/393 (1%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
+I ++ L+ A +K + + +ME GV +++TYN +I+ C++ AL+I
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKA 312
KM + G IV+ NSL+ GFC R+ EA + ++ + P+ VT+TTL+ G +
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
N+ +A+ + E M KG P + TY +++ LC+ G A LLN+M + K++AD +
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
+T+I++ K + AL +M G++PD FTY +LI C A LL ML+
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
P+ +++ ++D + K+ + L DE + + + + Y +LI C ++++
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI-----ITAKIY 547
A+++F M D V Y +L + K+ K + +M++R L+ T I+
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 548 SCFSVPDGHGENKVSQMFWDHVVERGLMSRNTM 580
F D V + V +M+ NT+
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 179/357 (50%), Gaps = 2/357 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E + + S ++ K R DAL +F +M ++P + + L+S L G + +
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ +++ + N+ +N LI A +K + A++L +EM ++ + P+I TYN+LI+ +C
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
EA I M + D+V+YN+LI GFCK ++ + +F ++ + N V
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYTTLI G+ +A++ D A V + M + G++P + TYN++L LC++G++ A + +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ K++ D T N + K G ++ + G+KPD Y +I GFCK
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVY 477
E A L M + G P +Y+ ++ + + + A L E S DAS Y
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 175/371 (47%), Gaps = 19/371 (5%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
+I L KY+H A + ++ ++ I D S ++S L +Y +
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKG-------------IRPDVFTYSSLISCLC-NYGR 290
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
DA ++ M ++ P++ L+ + K+G K+ ++Q + NI
Sbjct: 291 ---WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
YN LI+ ++ A+Q+ M K +PD+ TYNTLI+ +CK + + + M
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDAT-PNHVTYTTLIDGYCKANELD 316
R G+ + V+Y +LI+GF + A +F + + D PN +TY TL+DG CK +L+
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+A+ V E ++ + P + TYN + +C+ G++ D L +S K V+ D I NT+I
Sbjct: 468 KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
+ + K G + A KM E G PD TY LI + + ++ EL+ M F
Sbjct: 528 SGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFA 587
Query: 437 PSYCSYSWIVD 447
+Y + D
Sbjct: 588 GDASTYGLVTD 598
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 163/339 (48%), Gaps = 19/339 (5%)
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP--N 298
+C +G+++ LS E+ +S N+L++ ++ EA +F E+ + P +
Sbjct: 17 FCLRGIYFSGLSYDGYREK-------LSRNALLHL-----KLDEAVDLFGEMVKSRPFPS 64
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
V ++ L+ K + D + E ME G+ + TYN ++ LC+ ++ A +L
Sbjct: 65 IVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILG 124
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD 418
+M + +T N+L+N + + A+ ++M+E G +PD T+ L+HG + +
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 184
Query: 419 ELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
+ A L+ M+ G P +Y +++G CK+ D L L ++ + D +Y
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
+I LCK ++ A LF M+ GI D Y+SL G+ S AS +L +M +R
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 539 RLIITAKIYSCFSVPDGHG-ENKV--SQMFWDHVVERGL 574
+ I + + S+ D E K+ ++ +D +++R +
Sbjct: 305 K--INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 112/222 (50%), Gaps = 5/222 (2%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ + K++ D +++F M L + T L+ + + + K++V DG
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
V NI YN L+ K+ +E+A + +++ + PDI+TYN + CK G +
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGY 309
+ + +G+ D+++YN++I GFCK+G EA +F ++K+ P+ TY TLI +
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
Query: 310 CK-ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
+ ++ A ++E+ + + G A+ ++ + DGR+
Sbjct: 566 LRDGDKAASAELIKEMRSCR--FAGDASTYGLVTDMLHDGRL 605
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 208/399 (52%), Gaps = 3/399 (0%)
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
+R +A+ +F +M+ + P + TVL+ SL + + K + + G+ NI+
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y LI + E+A++LL +M EKG++P++ TYN LI+ YCK+GM +A+ + + ME
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELD 316
++ + +YN LI G+CK + +A + +++ + P+ VTY +LIDG C++ D
Sbjct: 421 SRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
A ++ LM +GL P TY S++ LC+ R+ +A L + + +K V + + LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
+ Y K G + A KML P+ T+ ALIHG C +L+ A L M+ G
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
P+ + + ++ K + D + + LS G DA Y I+ C+ ++ AE +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 497 FYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
M NG+S D Y+SL Y G+T+ A +VL+ M
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 215/473 (45%), Gaps = 40/473 (8%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
+V Y K ++A Q ++ L P T L+ + + +K+ + G
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
N Y LIH +R ++ A L +M++ P + TY LI C EAL
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGY 309
++ +ME GI +I +Y LI C + + +A + ++ K PN +TY LI+GY
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
CK ++ A+ V ELME++ L P TYN +++ C+ + A +LN+M E+KV D
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDV 462
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
+T N+LI+ + G+ SA + + M + GL PD +TY ++I CK +E A +L
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSK--------------GLCLDAS 475
+ G P+ Y+ ++DGYCK VD + ++ LSK GLC D
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 476 VYRA---------------------LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTS 514
+ A LI RL K + A F M +G D+ YT+
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 515 LAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMFWD 567
Y + G+ A +++ +M R ++ +++ S+ G+G+ + +D
Sbjct: 643 FIQTYCREGRLLDAEDMMAKM--RENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 201/445 (45%), Gaps = 85/445 (19%)
Query: 167 LLSSLLKDGTTNVVWKIHKRLVQ--DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
LL+ L+ +G VV+KI +++ D V +Y+ + C K ER E++
Sbjct: 129 LLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYV----LDLCRKMNKDERF-----ELKY 179
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
K + I YNTL++ + G+ E + +M + + +I +YN ++ G+CK G + E
Sbjct: 180 KLI---IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236
Query: 285 ATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKG------------- 329
A + S+I +A P+ TYT+LI GYC+ +LD A KV M KG
Sbjct: 237 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296
Query: 330 ----------------------LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
+P V TY +++ LC R +A L+ EM E ++
Sbjct: 297 GLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA---- 423
+ T LI++ + A + +MLE GL P+ TY ALI+G+CK +E A
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 424 ---------------KELLFG---------------MLDAGFTPSYCSYSWIVDGYCKKD 453
EL+ G ML+ P +Y+ ++DG C+
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
N D+ L +GL D Y ++I LCK +++E A LF +E G++ + V+YT
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 514 SLAYAYWKSGKTSVASNVLEEMAKR 538
+L Y K+GK A +LE+M +
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSK 561
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/508 (22%), Positives = 209/508 (41%), Gaps = 92/508 (18%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y K M +DA+ V E M +L P+ L+ K + ++K +++
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNK-MLERK 457
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
V+ ++ YN LI +S + + A +LL+ M ++G+VPD +TY ++I CK EA
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGY 309
+ D +E++G+N ++V Y +LI G+CK G++ EA M ++ K+ PN +T+ LI G
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 310 CKANELDQALKVRELMEAKGLYPGVAT--------------------------------- 336
C +L +A + E M GL P V+T
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 337 --YNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG----------- 383
Y + ++ C++GR+ DA ++ +M E V D T ++LI Y +G
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 384 ------------------------------------------DLKSALKFKNKMLESGLK 401
+ + ++ KM+E +
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGM-LDAGFTPSYCSYSWIVDGYCKKDNVDAILA 460
P+ +Y+ LI G C++ L A+++ M + G +PS ++ ++ CK +
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817
Query: 461 LPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYW 520
+ D+ + G + LI L K + E +F ++ G D + + +
Sbjct: 818 VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVG 877
Query: 521 KSGKTSVASNVLEEMAKRRLIITAKIYS 548
K G + M K +++ YS
Sbjct: 878 KQGLVEAFYELFNVMEKNGCKFSSQTYS 905
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 193/482 (40%), Gaps = 92/482 (19%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N++ + L+ Y KS + A+ V +M ++ P + L+ + G + +++
Sbjct: 427 NTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ G+V + + Y +I + KS+ VE A L + +E+KGV P++ Y LI YCK
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE------------- 291
G EA + +KM + + +++N+LI+G C +G+++EAT + +
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 292 -------IKDATPNHV-----------------TYTTLIDGYCKANELDQALKVRELMEA 327
+KD +H TYTT I YC+ L A + M
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 328 KGLYPGVATYNSILRKLCQDG----------RIRDAN----------------------- 354
G+ P + TY+S+++ G R+RD
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 355 --------------------KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK-FKN 393
+LL +M E V + + LI ++G+L+ A K F +
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
G+ P + AL+ CK+ + A +++ M+ G P S ++ G KK
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
+ ++ L G D ++ +I + K +E +LF ME NG S Y+
Sbjct: 846 EKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYS 905
Query: 514 SL 515
L
Sbjct: 906 LL 907
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 171/426 (40%), Gaps = 42/426 (9%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSW--LVIHY 136
+MI L K K + A + D + + VN V+ + L+ Y
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKG-------------------VNPNVVMYTALIDGY 542
Query: 137 AKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNI 196
K+ +A + E+M P+ L+ L DG + +++V+ G+ +
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
LIH K D + A +M G PD TY T I YC++G +A + K
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLID------- 307
M G++ D+ +Y+SLI G+ G+ A + ++D P+ T+ +LI
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722
Query: 308 GYCKAN-----------ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
G K + E D +++ E M + P +Y ++ +C+ G +R A K+
Sbjct: 723 GKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKV 782
Query: 357 LNEMSEKK-VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
+ M + + + N L++ K+ A K + M+ G P + K LI G
Sbjct: 783 FDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
K E E + +L G+ ++ I+DG K+ V+A L + G +
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQ 902
Query: 476 VYRALI 481
Y LI
Sbjct: 903 TYSLLI 908
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 113/247 (45%)
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
Y TL++ + +D+ +V M + P + TYN ++ C+ G + +AN+ ++++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
E + D T +LI Y + DL SA K N+M G + + Y LIHG C ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
A +L M D P+ +Y+ ++ C + L L E G+ + Y LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 482 RRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
LC + E A +L M G+ + + Y +L Y K G A +V+E M R+L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 542 ITAKIYS 548
+ Y+
Sbjct: 426 PNTRTYN 432
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 148/345 (42%), Gaps = 21/345 (6%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
NS + L+ ++A + E+M L+P + T+L+ LLKDG + +
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
++++ G + + Y I + + A+ ++ +M E GV PD+FTY++LI Y
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLI-------YG--------FCKEGRMREATRMF 289
G A + +M G ++ SLI YG C M E +
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 290 SEIK-----DATPNHVTYTTLIDGYCKANELDQALKVRELMEA-KGLYPGVATYNSILRK 343
++ TPN +Y LI G C+ L A KV + M+ +G+ P +N++L
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 344 LCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD 403
C+ + +A K++++M +C LI K G+ + +L+ G D
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 865
Query: 404 PFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
+K +I G K +E+ EL M G S +YS +++G
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 203/378 (53%), Gaps = 2/378 (0%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
+ + + ++ + P++ T L+ K G + + + G+V N Y L
Sbjct: 180 EKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVL 239
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
I+ K+ ++ ++ +M+E GV P+++TYN +++ CK G +A + D+M G+
Sbjct: 240 INGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALK 320
+ +IV+YN+LI G C+E ++ EA ++ ++K PN +TY TLIDG+C +L +AL
Sbjct: 300 SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ ++++GL P + TYN ++ C+ G A K++ EM E+ ++ +T LI+ ++
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
+ +++ A++ + M E GL PD TY LIHGFC ++ A L M++ P+
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM 500
Y+ ++ GYCK+ + L L E K L + + YR +I LCK + + AE+L M
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Query: 501 EGNGISGDSVIYTSLAYA 518
+GI + I + ++ A
Sbjct: 540 IDSGIDPSTSILSLISRA 557
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 202/411 (49%), Gaps = 3/411 (0%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
++ Y +S+ ++ F +M P LL+ ++ + N W +
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSK 158
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
VVL++Y + LI C ++ ++E++ LL E+ E G P++ Y TLI CKKG +A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGY 309
+ +M + G+ + +Y LI G K G ++ M+ ++++ PN TY +++
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
CK A +V + M +G+ + TYN+++ LC++ ++ +ANK++++M + +
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
IT NTLI+ + +G L AL + GL P TY L+ GFC+ + A +++
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
M + G PS +Y+ ++D + + DN++ + L GL D Y LI C Q
Sbjct: 399 MEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 490 IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
+ A +LF M + VIY ++ Y K G + A +L+EM ++ L
Sbjct: 459 MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 184/358 (51%), Gaps = 37/358 (10%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N + + L+ K + A +F +M L + TVL++ L K+G ++++
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+++ +DGV N+Y YNC+++ K + A Q+ +EM E+GV +I TYNTLI C++
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLI------------------------------- 273
EA + D+M+ +GIN ++++YN+LI
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 274 ----YGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEA 327
GFC++G A +M E+++ P+ VTYT LID + +++ +++A+++R ME
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 328 KGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKS 387
GL P V TY+ ++ C G++ +A++L M EK + + + NT+I Y K G
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 388 ALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
ALK +M E L P+ +Y+ +I CK + + A+ L+ M+D+G PS S I
Sbjct: 497 ALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 206/429 (48%), Gaps = 18/429 (4%)
Query: 123 EVNSQVL-SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
+++SQ S ++HY T + RLY+ V+++S ++ + N+
Sbjct: 69 KIHSQFFTSSSLLHYLTESETSKT-----KFRLYE---------VIINSYVQSQSLNLSI 114
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+V +G V +N L+ S + NE + K VV D++++ LI
Sbjct: 115 SYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGC 173
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNH 299
C+ G ++ + ++ G + ++V Y +LI G CK+G + +A +F E+ N
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE 233
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
TYT LI+G K Q ++ E M+ G++P + TYN ++ +LC+DGR +DA ++ +E
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
M E+ V + +T NTLI + L A K ++M G+ P+ TY LI GFC + +
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
L A L + G +PS +Y+ +V G+C+K + + E +G+ Y
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
LI + + +E A +L ME G+ D Y+ L + + G+ + AS + + M ++
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 540 LIITAKIYS 548
IY+
Sbjct: 474 CEPNEVIYN 482
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 8/204 (3%)
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH---GFCKMDELESAKELLFGML 431
+IN+Y + L ++ + N+M+++G P + L+ G ++ S F
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS----FFNEN 155
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
+ S+ ++ G C+ ++ L E G + +Y LI CK +IE
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSC-F 550
A+ LF+ M G+ + YT L +K+G + E+M + + Y+C
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 551 SVPDGHGENKVSQMFWDHVVERGL 574
+ G K + +D + ERG+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGV 299
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 215/420 (51%), Gaps = 5/420 (1%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
P+ + V S L++ + + + ++AL V +M+ P AC +L+ L++ + VW
Sbjct: 128 PKFSIGVFSLLIMEFLEMGLFEEALWVSREMKC---SPDSKACLSILNGLVRRRRFDSVW 184
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++ ++ G+V +++IY L C K + ++LL+EM G+ P+++ Y I
Sbjct: 185 VDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDL 244
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNH 299
C+ EA + + M++ G+ ++ +Y+++I G+CK G +R+A ++ EI + PN
Sbjct: 245 CRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNV 304
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
V + TL+DG+CKA EL A + M G+ P + YN ++ C+ G + +A LL+E
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
M + D T LIN + A + KM + P TY +LIHG+CK
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
+E A +L M +G P+ ++S ++DGYC ++ A + L E KG+ D Y A
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
LI K ++ A +L+ M GI + + L +WK G+ SVA + +E ++R
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 197/371 (53%), Gaps = 2/371 (0%)
Query: 147 QVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHAC 206
++ ++M +KP++ T+ + L +D K+ + + + GV+ N+Y Y+ +I
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 207 SKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDI 266
K+ +V +A L E+ ++P++ + TL+ +CK A S+ M + G++ ++
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 267 VSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVREL 324
YN LI+G CK G M EA + SE++ + +P+ TYT LI+G C +++ +A ++ +
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGD 384
M+ + ++P ATYNS++ C++ + A L +EM+ V+ + IT +TLI+ Y + D
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 385 LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW 444
+K+A+ +M G+ PD TY ALI K ++ A L ML+AG P+ +++
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 445 IVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNG 504
+VDG+ K+ + + E + C + + LI LC+ I A + F M G
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Query: 505 ISGDSVIYTSL 515
I+ D Y S+
Sbjct: 580 ITPDICSYVSM 590
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 190/395 (48%), Gaps = 37/395 (9%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N + + ++ + ++A ++FE M+ + + P+L + ++ K G + ++
Sbjct: 233 NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY 292
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
K ++ ++ N+ ++ L+ K+R++ A+ L M + GV P+++ YN LI +CK
Sbjct: 293 KEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKS 352
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTY 302
G EA+ + +ME ++ D+ +Y LI G C E ++ EA R+F ++K+ P+ TY
Sbjct: 353 GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+LI GYCK ++QAL + M A G+ P + T+++++ C I+ A L EM+
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTI 472
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF-------- 414
K + D +T LI+A+ K ++K AL+ + MLE+G+ P+ T+ L+ GF
Sbjct: 473 KGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSV 532
Query: 415 ---------------------------CKMDELESAKELLFGMLDAGFTPSYCSYSWIVD 447
C+ + A M G TP CSY ++
Sbjct: 533 AIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLK 592
Query: 448 GYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
G+ ++ + + L + + G+ + V + L R
Sbjct: 593 GHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLAR 627
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 140/310 (45%), Gaps = 39/310 (12%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
DP N V + L+ + KS +A+ + +M L P + T+L++ L +
Sbjct: 336 DP--NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
++ +++ + + + YN LIH K ++E+A L +EM GV P+I T++TLI
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDG 453
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PN 298
YC A+ + +M +GI D+V+Y +LI KE M+EA R++S++ +A PN
Sbjct: 454 YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPN 513
Query: 299 -----------------------------------HVTYTTLIDGYCKANELDQALKVRE 323
HV +T LI+G C+ + +A +
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573
Query: 324 LMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
M + G+ P + +Y S+L+ Q+ RI D L +M + + + + L Y G
Sbjct: 574 DMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANG 633
Query: 384 DLKSALKFKN 393
+KSA N
Sbjct: 634 YVKSACFLTN 643
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 37/259 (14%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A ++F++M+ ++ P L+ K+ + + GV NI ++ LI
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
RD++ A L EM KG+VPD+ TY LI + K+ EAL + M GI+
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 264 ----------------------LDI-------------VSYNSLIYGFCKEGRMREATRM 288
+D V + LI G C+ G + A+R
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 289 FSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQ 346
FS+++ TP+ +Y +++ G+ + + + ++ M G+ P + + R
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQA 631
Query: 347 DGRIRDANKLLNEMSEKKV 365
+G ++ A L N K V
Sbjct: 632 NGYVKSACFLTNSSRLKTV 650
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 220/433 (50%), Gaps = 13/433 (3%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
+A+ + ++M +P L +++ L K G ++ + K++ + + ++ IY
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I A ++V A L EM+ KG+ P++ TYN+LI C G +A + M
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
IN ++V++++LI F KEG++ EA +++ E+ + P+ TY++LI+G+C + LD+A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+ ELM +K +P V TYN++++ C+ R+ + +L EMS++ + + +T NTLI
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
+ GD A K KM+ G+ PD TY L+ G CK +LE A + + + P
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+Y+ +++G CK V+ L KG+ + +Y +I C+ E A+ LF
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGEN 559
M+ +G +S Y +L A + G + ++ +++EM SC V D +
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR-----------SCGFVGDASTIS 609
Query: 560 KVSQMFWDHVVER 572
V M D +E+
Sbjct: 610 MVINMLHDGRLEK 622
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 216/434 (49%), Gaps = 37/434 (8%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
DA+ +F +M + P + LLS++ K ++V + +R+ + ++Y YN LI
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG--------------MHY- 248
+ + + A +L +M + G PDI T ++L++ YC M Y
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 249 --------------------EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRM 288
EA+++ D+M G D+ +Y +++ G CK G + A +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 289 FSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQ 346
+++ + V YTT+ID C ++ AL + M+ KG+ P V TYNS++R LC
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 347 DGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFT 406
GR DA++LL++M E+K+ + +T + LI+A+ K G L A K ++M++ + PD FT
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 407 YKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFL 466
Y +LI+GFC D L+ AK + M+ P+ +Y+ ++ G+CK V+ + L E
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 467 SKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTS 526
+GL + Y LI+ L + + A+K+F M +G+ D + Y+ L K GK
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 527 VASNVLEEMAKRRL 540
A V E + K ++
Sbjct: 483 KALVVFEYLQKSKM 496
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 167/374 (44%), Gaps = 37/374 (9%)
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNS 271
++ A L EM + +P I +N L+S K +S+ ++M+ I+ D+ SYN
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 272 LIYGFCKEG-----------------------------------RMREATRMFSE--IKD 294
LI FC+ R+ EA + + + +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
PN VT+ TLI G N+ +A+ + + M A+G P + TY +++ LC+ G I A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
LL +M + K++AD + T+I+A ++ AL +M G++P+ TY +LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
C A LL M++ P+ ++S ++D + K+ + L DE + + + D
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
Y +LI C ++++ A+ +F M + V Y +L + K+ + + E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 535 MAKRRLIITAKIYS 548
M++R L+ Y+
Sbjct: 421 MSQRGLVGNTVTYN 434
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 156/336 (46%), Gaps = 19/336 (5%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
++I+ L Y + A ++L + R +P V + S L+ + K
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKI---------------NPNVVT--FSALIDAFVK 337
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
+A +++++M + P + + L++ + + + ++ N+
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
YN LI K++ VE +L EM ++G+V + TYNTLI + G A I KM
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELD 316
+G+ DI++Y+ L+ G CK G++ +A +F ++ + P+ TY +I+G CKA +++
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+ + KG+ P V Y +++ C+ G +A+ L EM E ++ T NTLI
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
A + GD ++ + +M G D T +I+
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 120/235 (51%), Gaps = 3/235 (1%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
I D N + L+ + K++ ++ +++F +M L + L+ L + G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
++ KI K++V DGV +I Y+ L+ K +E+A + +++ + PDI+TYN +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK-DAT 296
I CK G + + + +G+ +++ Y ++I GFC++G EA +F E+K D T
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 297 -PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
PN TY TLI + + + ++ + M + G + G A+ S++ + DGR+
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG-FVGDASTISMVINMLHDGRL 620
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 2/223 (0%)
Query: 314 ELDQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
+LD A+ + E+++++ L P + +N +L + + + L M ++ D +
Sbjct: 60 KLDDAVDLFGEMVQSRPL-PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
N LIN + + L AL KM++ G +PD T +L++G+C + A L+ M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
+ P+ +++ ++ G + +AL D +++G D Y ++ LCK I+
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
A L ME I D VIYT++ A + A N+ EM
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 191/369 (51%), Gaps = 4/369 (1%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
T+ AL + +M +KP + + ++ L KDG + + +++ G+ N++ YNC
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 202 LIHA-CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMERE 260
+I CS R A++LL +M E+ + PD+ T+N LIS K+G +EA + D+M
Sbjct: 337 MIDGFCSFGR-WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 261 GINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALK 320
I D V+YNS+IYGFCK R +A MF + A+P+ VT+ T+ID YC+A +D+ ++
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM--ASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ + +GL TYN+++ C+ + A L EM V D ITCN L+ +
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
+ L+ AL+ + S + D Y +IHG CK +++ A +L + G P
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM 500
+Y+ ++ G+C K + L + G D S Y LIR K +I+ + +L M
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 501 EGNGISGDS 509
NG SGD+
Sbjct: 634 RSNGFSGDA 642
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 226/462 (48%), Gaps = 34/462 (7%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A+ ++ +M + ++ ++ + +L+ + +L + G ++ +N L+H
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 205 A-CSKSRDVE--------------RAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
C + R E A L ++M E G+ P + T+NTLI+ C +G E
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLID 307
A ++ +KM +G+++D+V+Y +++ G CK G + A + S++++ P+ V Y+ +ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
CK A + M KG+ P V TYN ++ C GR DA +LL +M E+++
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
D +T N LI+A K G L A K ++ML + PD TY ++I+GFCK + + AK
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH-- 422
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M D +P +++ I+D YC+ VD + L E +GL + + Y LI C++
Sbjct: 423 --MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
+ + A+ LF M +G+ D++ L Y + ++ K A + E + ++ + Y
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 548 SCFSVPDGHGENKVSQM--FWD-------HVVERGLMSRNTM 580
+ HG K S++ WD H VE + + N M
Sbjct: 541 NIII----HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 195/372 (52%), Gaps = 8/372 (2%)
Query: 167 LLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKG 226
+++ + K G T + ++ + + ++ IY+ +I K A+ L +EM EKG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 227 VVPDIFTYNTLISLYCKKGMHYEALSI-QDKMEREGINLDIVSYNSLIYGFCKEGRMREA 285
+ P++FTYN +I +C G +A + +D +ERE IN D++++N+LI KEG++ EA
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFEA 385
Query: 286 TRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRK 343
++ E+ + P+ VTY ++I G+CK N D A + +LM + P V T+N+I+
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDV 441
Query: 344 LCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD 403
C+ R+ + +LL E+S + + A+ T NTLI+ + ++ +L +A +M+ G+ PD
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 404 PFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPD 463
T L++GFC+ ++LE A EL + + +Y+ I+ G CK VD L
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 464 EFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
G+ D Y +I C I A LF+ M+ NG D+ Y +L K+G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 524 KTSVASNVLEEM 535
+ + ++ EM
Sbjct: 622 EIDKSIELISEM 633
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 133/306 (43%), Gaps = 22/306 (7%)
Query: 235 NTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD 294
N +I ++ + A+S+ KME I L+I S+N LI FC ++ + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 295 A--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
P+ VT+ TL+ G C + + +AL + M G VA
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA----------------- 212
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
L ++M E + IT NTLIN G + A NKM+ GL D TY +++
Sbjct: 213 ---LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 413 GFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL 472
G CKM + +SA LL M + P YS I+D CK + L E L KG+
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 473 DASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVL 532
+ Y +I C + A++L M I+ D + + +L A K GK A +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 533 EEMAKR 538
+EM R
Sbjct: 390 DEMLHR 395
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 17/251 (6%)
Query: 315 LDQALKVRELM-EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
LD A+ + M ++ Y V N ++ + R A L +M +++ + + N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
LI + L +L K+ + G +PD T+ L+HG C D + A L M++
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 434 GF---------------TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
GF TP +++ +++G C + V AL ++ + KGL +D Y
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
++ +CK+ + A L ME I D VIY+++ K G S A + EM ++
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 539 RLIITAKIYSC 549
+ Y+C
Sbjct: 326 GIAPNVFTYNC 336
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 118/274 (43%), Gaps = 24/274 (8%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
+MI K+ F A+ M D +A D + ++ Y +
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASPDVV---------------------TFNTIIDVYCR 444
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
++ + +Q+ ++ L + L+ + N + + ++ GV +
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
N L++ ++ +E A +L ++ + D YN +I CK EA + +
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELD 316
G+ D+ +YN +I GFC + + +A +F ++KD P++ TY TLI G KA E+D
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
+++++ M + G + G A ++ L DGR+
Sbjct: 625 KSIELISEMRSNG-FSGDAFTIKMVADLITDGRL 657
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 192/369 (52%), Gaps = 4/369 (1%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
T+ AL + +M +KP + + ++ L KDG + + +++ G+ N++ YNC
Sbjct: 277 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 202 LIHA-CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMERE 260
+I CS R + A++LL +M E+ + PD+ T+N LIS K+G +EA + D+M
Sbjct: 337 MIDGFCSFGRWSD-AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 261 GINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALK 320
I D V+YNS+IYGFCK R +A MF + A+P+ VT+ T+ID YC+A +D+ ++
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM--ASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ + +GL TYN+++ C+ + A L EM V D ITCN L+ +
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
+ L+ AL+ + S + D Y +IHG CK +++ A +L + G P
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM 500
+Y+ ++ G+C K + L + G D S Y LIR K +I+ + +L M
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 501 EGNGISGDS 509
NG SGD+
Sbjct: 634 RSNGFSGDA 642
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 226/462 (48%), Gaps = 34/462 (7%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A+ ++ +M + ++ ++ + +L+ + +L + G ++ +N L+H
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 205 A-CSKSRDVE--------------RAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
C + R E A L ++M E G+ P + T+NTLI+ C +G E
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLID 307
A ++ +KM +G+++D+V+Y +++ G CK G + A + S++++ P+ V Y+ +ID
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
CK A + M KG+ P V TYN ++ C GR DA +LL +M E+++
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
D +T N LI+A K G L A K ++ML + PD TY ++I+GFCK + + AK
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH-- 422
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M D +P +++ I+D YC+ VD + L E +GL + + Y LI C++
Sbjct: 423 --MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
+ + A+ LF M +G+ D++ L Y + ++ K A + E + ++ + Y
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 548 SCFSVPDGHGENKVSQM--FWD-------HVVERGLMSRNTM 580
+ HG K S++ WD H VE + + N M
Sbjct: 541 NIII----HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 195/373 (52%), Gaps = 8/373 (2%)
Query: 166 VLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEK 225
+++ + K G T + ++ + + ++ IY+ +I K A+ L +EM EK
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 226 GVVPDIFTYNTLISLYCKKGMHYEALSI-QDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
G+ P++FTYN +I +C G +A + +D +ERE IN D++++N+LI KEG++ E
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFE 384
Query: 285 ATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A ++ E+ + P+ VTY ++I G+CK N D A + +LM + P V T+N+I+
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIID 440
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
C+ R+ + +LL E+S + + A+ T NTLI+ + ++ +L +A +M+ G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALP 462
D T L++GFC+ ++LE A EL + + +Y+ I+ G CK VD L
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 463 DEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKS 522
G+ D Y +I C I A LF+ M+ NG D+ Y +L K+
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 523 GKTSVASNVLEEM 535
G+ + ++ EM
Sbjct: 621 GEIDKSIELISEM 633
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 33/312 (10%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI-----HKRLVQDGVVLNIY 197
DA ++ M ++ P + L+S+ +K+G K+ H+ + D V N
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 198 IY--------------------------NCLIHACSKSRDVERAKQLLNEMEEKGVVPDI 231
IY N +I +++ V+ QLL E+ +G+V +
Sbjct: 408 IYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 232 FTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE 291
TYNTLI +C+ A + +M G+ D ++ N L+YGFC+ ++ EA +F
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 292 IKDATPN--HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGR 349
I+ + + V Y +I G CK +++D+A + + G+ P V TYN ++ C
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 350 IRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
I DAN L ++M + + DN T NTLI K G++ +++ ++M +G D FT K
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Query: 410 LIHGFCKMDELE 421
C++ + E
Sbjct: 648 AEEIICRVSDEE 659
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 133/306 (43%), Gaps = 22/306 (7%)
Query: 235 NTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD 294
N +I ++ + A+S+ KME I L+I S+N LI FC ++ + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 295 A--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
P+ VT+ TL+ G C + + +AL + M G VA
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA----------------- 212
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
L ++M E + IT NTLIN G + A NKM+ GL D TY +++
Sbjct: 213 ---LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 413 GFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL 472
G CKM + +SA LL M + P YS I+D CK + L E L KG+
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 473 DASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVL 532
+ Y +I C + A++L M I+ D + + +L A K GK A +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 533 EEMAKR 538
+EM R
Sbjct: 390 DEMLHR 395
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 17/251 (6%)
Query: 315 LDQALKVRELM-EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
LD A+ + M ++ Y V N ++ + R A L +M +++ + + N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
LI + L +L K+ + G +PD T+ L+HG C D + A L M++
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 434 GF---------------TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
GF TP +++ +++G C + V AL ++ + KGL +D Y
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
++ +CK+ + A L ME I D VIY+++ K G S A + EM ++
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 539 RLIITAKIYSC 549
+ Y+C
Sbjct: 326 GIAPNVFTYNC 336
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 210/396 (53%), Gaps = 2/396 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
+A+ + ++M +P L V+++ L K G T++ + + ++ Q + + IYN
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I K + ++ A L EME KG+ P++ TY++LIS C G +A + M
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
IN D+ ++++LI F KEG++ EA +++ E+ + P+ VTY++LI+G+C + LD+A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
++ E M +K +P V TYN++++ C+ R+ + ++ EMS++ + + +T N LI
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
+ GD A + +M+ G+ P+ TY L+ G CK +LE A + + + P+
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+Y+ +++G CK V+ L KG+ D Y +I C+ E A+ LF
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
M+ +G +S Y +L A + G ++ +++EM
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 215/422 (50%), Gaps = 2/422 (0%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
S L+ AK + + EQM+ + + ++L++ + + + +++
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ G NI + L++ S+ + A L+++M G P+ T+NTLI
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLI 306
EA+++ D+M +G D+V+Y ++ G CK G A + ++++ P + Y T+I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
DG CK +D AL + + ME KG+ P V TY+S++ LC GR DA++LL++M E+K+
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
D T + LI+A+ K G L A K ++M++ + P TY +LI+GFC D L+ AK++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
M+ P +Y+ ++ G+CK V+ + + E +GL + Y LI+ L +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 487 IEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKI 546
+ A+++F M +G+ + + Y +L K+GK A V E + + ++ T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 547 YS 548
Y+
Sbjct: 504 YN 505
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 170/341 (49%), Gaps = 2/341 (0%)
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
K + DAL +F++M ++P++ + L+S L G + ++ +++ + +++
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
++ LI A K + A++L +EM ++ + P I TY++LI+ +C EA + + M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANEL 315
+ D+V+YN+LI GFCK R+ E +F E+ + N VTY LI G +A +
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
D A ++ + M + G+ P + TYN++L LC++G++ A + + K++ T N +
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
I K G ++ + G+KPD Y +I GFC+ E A L M + G
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
P+ Y+ ++ + + +A L E S G DAS
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 153/330 (46%), Gaps = 19/330 (5%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
++I L Y + A ++L + R +P+V + S L+ + K
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKI---------------NPDVFT--FSALIDAFVK 338
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
+A +++++M + P + + L++ + ++ + +V ++
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
YN LI K + VE ++ EM ++G+V + TYN LI + G A I +M
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELD 316
+G+ +I++YN+L+ G CK G++ +A +F ++ + P TY +I+G CKA +++
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+ + KG+ P V YN+++ C+ G +A+ L EM E ++ NTLI
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFT 406
A + GD +++ + +M G D T
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 134/301 (44%), Gaps = 19/301 (6%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
A+I K A+++ D++ R DP + + S L+ +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSI---------------DPSIVT--YSSLINGFCM 373
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
+A Q+FE M P + L+ K ++ + + Q G+V N
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
YN LI ++ D + A+++ EM GV P+I TYNTL+ CK G +A+ + + ++
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVTYTTLIDGYCKANELD 316
R + I +YN +I G CK G++ + +F +K P+ V Y T+I G+C+ +
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+A + + M+ G P YN+++R +DG + +L+ EM D T +
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 613
Query: 377 N 377
N
Sbjct: 614 N 614
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 147/301 (48%), Gaps = 7/301 (2%)
Query: 279 EGRMREATRMFSEIKDATP--NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVAT 336
E ++ +A +F E+ + P + + ++ L+ K N+ D + + E M+ G+ T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 337 YNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML 396
Y+ ++ C+ ++ A +L +M + + + +T ++L+N Y + A+ ++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 397 ESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
+G +P+ T+ LIHG ++ A L+ M+ G P +Y +V+G CK+ + D
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 457 AILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLA 516
L ++ L +Y +I LCK + ++ A LF ME GI + V Y+SL
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 517 YAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDG---HGENKVSQMFWDHVVERG 573
G+ S AS +L +M +R+ I +++ ++ D G+ ++ +D +V+R
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERK--INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 574 L 574
+
Sbjct: 357 I 357
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 115/221 (52%), Gaps = 3/221 (1%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ + K + ++ ++VF +M L + +L+ L + G ++ +I K +V DG
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
V NI YN L+ K+ +E+A + ++ + P I+TYN +I CK G +
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK-DAT-PNHVTYTTLIDGY 309
+ + +G+ D+V+YN++I GFC++G EA +F E+K D T PN Y TLI
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
+ + + + ++ + M + G + G A+ ++ + DGR+
Sbjct: 582 LRDGDREASAELIKEMRSCG-FAGDASTIGLVTNMLHDGRL 621
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 211/407 (51%), Gaps = 9/407 (2%)
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
N + +V+ + +I + L++ +K + + L + ++ GV D++T N L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-- 295
++ +C+ Y A S KM + G DIV++ SLI GFC RM EA M +++ +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ V YTT+ID CK ++ AL + + ME G+ P V Y S++ LC GR RDA+
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
LL M+++K++ D IT N LI+A+ K G A + N+M+ + P+ FTY +LI+GFC
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
++ A+++ + M G P +Y+ +++G+CK VD + + E KGL +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
Y LI+ ++ + A+++F HM G+ + Y L + +GK A + E+M
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 536 AKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVERGLMSRNTMRK 582
KR + A ++V HG + ++ +E+ LM MRK
Sbjct: 414 QKREMDGVAPNIWTYNVLL-HG------LCYNGKLEKALMVFEDMRK 453
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 193/384 (50%), Gaps = 5/384 (1%)
Query: 157 LKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAK 216
+P + T L++ + ++V+ G+ ++ +Y +I + K+ V A
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 217 QLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGF 276
L ++ME G+ PD+ Y +L++ C G +A S+ M + I D++++N+LI F
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 277 CKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGV 334
KEG+ +A +++E+ PN TYT+LI+G+C +D+A ++ LME KG +P V
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 335 ATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNK 394
Y S++ C+ ++ DA K+ EMS+K + + IT TLI + ++G A + +
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 395 MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA---GFTPSYCSYSWIVDGYCK 451
M+ G+ P+ TY L+H C +++ A + M G P+ +Y+ ++ G C
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 452 KDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVI 511
++ L + ++ + + + Y +I+ +CK +++ A LF + G+ + V
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 512 YTSLAYAYWKSGKTSVASNVLEEM 535
YT++ ++ G A + +M
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKM 521
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 181/369 (49%), Gaps = 5/369 (1%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
++A+ + QM +KP + T ++ SL K+G N + ++ G+ ++ +Y L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
++ S A LL M ++ + PD+ T+N LI + K+G +A + ++M R I
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMF--SEIKDATPNHVTYTTLIDGYCKANELDQALK 320
+I +Y SLI GFC EG + EA +MF E K P+ V YT+LI+G+CK ++D A+K
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ M KGL TY ++++ Q G+ A ++ + M + V + T N L++
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 381 KIGDLKSALKFKNKMLE---SGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
G +K AL M + G+ P+ +TY L+HG C +LE A + M
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
+Y+ I+ G CK V + L SKG+ + Y +I L + A LF
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 498 YHMEGNGIS 506
M+ +G+S
Sbjct: 519 RKMKEDGVS 527
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
+ ++AL + M P + + +L + + + L + + V D TCN
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
L+N + + A F KM++ G +PD T+ +LI+GFC + +E A ++ M++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
G P Y+ I+D CK +V+ L+L D+ + G+ D +Y +L+ LC + A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVP 553
+ L M I D + + +L A+ K GK A + EM R+ I I++ S+
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI--RMSIAPNIFTYTSLI 289
Query: 554 DGHGE----NKVSQMFW 566
+G ++ QMF+
Sbjct: 290 NGFCMEGCVDEARQMFY 306
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%)
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+AL L++ Y ILR + +A L M E + I L+
Sbjct: 20 KALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLL 79
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
N +K+ + + + G+ D +T L++ FC+ + A L M+ GF
Sbjct: 80 NVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFE 139
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
P +++ +++G+C + ++ +++ ++ + G+ D +Y +I LCK + A L
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 497 FYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
F ME GI D V+YTSL SG+ A ++L M KR++
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 209/405 (51%), Gaps = 2/405 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
+A+ + ++M +P+L V+++ L K G T++ + ++ + ++ I+N
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I + K R V+ A L EME KG+ P++ TY++LIS C G +A + M +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
IN ++V++N+LI F KEG+ EA +++ ++ + P+ TY +L++G+C + LD+A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
++ E M +K +P V TYN++++ C+ R+ D +L EMS + + D +T TLI
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
GD +A K +M+ G+ PD TY L+ G C +LE A E+ M +
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
Y+ +++G CK VD L KG+ + Y +I LC ++ A L
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITA 544
M+ +G +S Y +L A+ + G + ++ ++ EM R + A
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 610
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 216/443 (48%), Gaps = 37/443 (8%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
DA+ +F M + P + LLS++ K +VV + +++ + +V +Y YN L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG--------------MHY 248
I+ + + A LL +M + G P I T ++L++ YC M Y
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 249 ---------------------EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATR 287
EA+++ D+M + G ++V+Y ++ G CK G A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 288 MFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
+ ++++ A + V + T+ID CK +D AL + + ME KG+ P V TY+S++ LC
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
GR DA++LL++M EKK+ + +T N LI+A+ K G A K + M++ + PD F
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
TY +L++GFC D L+ AK++ M+ P +Y+ ++ G+CK V+ L E
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKT 525
+GL D Y LI+ L + A+K+F M +G+ D + Y+ L +GK
Sbjct: 427 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 486
Query: 526 SVASNVLEEMAKRRLIITAKIYS 548
A V + M K + + IY+
Sbjct: 487 EKALEVFDYMQKSEIKLDIYIYT 509
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 178/355 (50%), Gaps = 2/355 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E + + + ++ K R DAL +F++M ++P++ + L+S L G + +
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ +++ + N+ +N LI A K A++L ++M ++ + PDIFTYN+L++ +C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
+A + + M + D+V+YN+LI GFCK R+ + T +F E+ + + V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYTTLI G + D A KV + M + G+ P + TY+ +L LC +G++ A ++ + M
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ +++ D T+I K G + + G+KP+ TY +I G C L
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
+ A LL M + G P+ +Y+ ++ + + + A L E S DAS
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 611
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 130/301 (43%), Gaps = 19/301 (6%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
A+I K F A+++ D + R DP++ + + LV +
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSI---------------DPDIFTY--NSLVNGFCM 377
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
A Q+FE M P + L+ K ++ + + G+V +
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y LI D + A+++ +M GV PDI TY+ L+ C G +AL + D M+
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELD 316
+ I LDI Y ++I G CK G++ + +F + K PN VTY T+I G C L
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+A + + M+ G P TYN+++R +DG + +L+ EM + D T +
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVA 617
Query: 377 N 377
N
Sbjct: 618 N 618
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 35/262 (13%)
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
+LD A+ + M P + +N +L + + + L +M ++ T N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
LIN + + + AL KM++ G +P T +L++G+C + A L+ M++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 434 GF-----------------------------------TPSYCSYSWIVDGYCKKDNVDAI 458
G+ P+ +Y +V+G CK+ + D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 459 LALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
L L ++ + + D ++ +I LCK ++ A LF ME GI + V Y+SL
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 519 YWKSGKTSVASNVLEEMAKRRL 540
G+ S AS +L +M ++++
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKI 326
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%)
Query: 327 AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLK 386
+ G Y ILR D ++ DA L M + + + N L++A +K+
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 387 SALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
+ KM + +TY LI+ FC+ ++ A LL M+ G+ PS + S ++
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 447 DGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGIS 506
+GYC + +AL D+ + G D + LI L + A L M G
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 507 GDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
+ V Y + K G T +A N+L +M ++ I++
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 212/414 (51%), Gaps = 2/414 (0%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
S L+ AK + + EQM+ + +L ++L++ + ++ + +++
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ G +I N L++ + A L+ +M E G PD FT+NTLI +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLI 306
EA+++ D+M +G D+V+Y ++ G CK G + A + +++ P V Y T+I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
D C ++ AL + M+ KG+ P V TYNS++R LC GR DA++LL++M E+K+
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
+ +T + LI+A+ K G L A K ++M++ + PD FTY +LI+GFC D L+ AK +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
M+ P+ +Y+ ++ G+CK VD + L E +GL + Y LI +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 487 IEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
+ + A+ +F M +G+ D + Y+ L +GK A V E + + ++
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 212/405 (52%), Gaps = 2/405 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
+A+ + ++M + +P L ++++ L K G ++ + K++ Q + + IYN
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I A ++V A L EM+ KG+ P++ TYN+LI C G +A + M
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
IN ++V++++LI F KEG++ EA +++ E+ + P+ TY++LI+G+C + LD+A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+ ELM +K +P V TYN++++ C+ R+ + +L EMS++ + + +T TLI+ +
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
+ + +A +M+ G+ PD TY L+ G C ++E+A + + + P
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+Y+ +++G CK V+ L KG+ + Y ++ C+ E A+ LF
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITA 544
M+ G DS Y +L A+ + G + ++ ++ EM R + A
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 606
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 196/409 (47%), Gaps = 2/409 (0%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
L+ L+ + DA+ + QM +P L+ L + + + R+V
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV 213
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
G ++ Y +++ K D++ A LL +ME+ + P + YNT+I C
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLI 306
+AL++ +M+ +GI ++V+YNSLI C GR +A+R+ S++ + PN VT++ LI
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
D + K +L +A K+ + M + + P + TY+S++ C R+ +A + M K
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
+ +T NTLI + K + ++ +M + GL + TY LIHGF + E ++A+ +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
M+ G P +YS ++DG C V+ L + + + D Y +I +CK
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 487 IEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
++E LF + G+ + V YT++ + + G A + EM
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 167/336 (49%), Gaps = 2/336 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
DAL +F +M ++P++ L+ L G + ++ +++ + N+ ++
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
LI A K + A++L +EM ++ + PDIFTY++LI+ +C EA + + M +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
++V+YN+LI GFCK R+ E +F E+ + N VTYTTLI G+ +A E D A
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
V + M + G+ P + TY+ +L LC +G++ A + + K++ D T N +I
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
K G ++ + G+KP+ TY ++ GFC+ E A L M + G P
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
+Y+ ++ + + + A L E S DAS
Sbjct: 572 GTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 607
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 164/374 (43%), Gaps = 37/374 (9%)
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNS 271
++ A L +M + P I ++ L+S K +S+ ++M+ GI+ ++ +Y+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 272 LIYGFCKEGRMREATRMFSE-------------------------IKDAT---------- 296
LI FC+ ++ A + ++ I DA
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 297 --PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
P+ T+ TLI G + N +A+ + + M KG P + TY ++ LC+ G I A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
LL +M + K++ + NT+I+A ++ AL +M G++P+ TY +LI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
C A LL M++ P+ ++S ++D + K+ + L DE + + + D
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
Y +LI C ++++ A+ +F M + V Y +L + K+ + + E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 535 MAKRRLIITAKIYS 548
M++R L+ Y+
Sbjct: 422 MSQRGLVGNTVTYT 435
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 19/301 (6%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
A+I K A+++ D++ R DP++ + S L+ +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSI---------------DPDIFTY--SSLINGFCM 373
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
+A +FE M P++ L+ K + ++ + + Q G+V N
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y LIH ++R+ + A+ + +M GV+PDI TY+ L+ C G AL + + ++
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELD 316
R + DI +YN +I G CK G++ + +F + K PN VTYTT++ G+C+ +
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+A + M+ +G P TYN+++R +DG + +L+ EM + D T +
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVT 613
Query: 377 N 377
N
Sbjct: 614 N 614
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 115/236 (48%), Gaps = 5/236 (2%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
I D N + L+ + K++ + +++F +M L + T L+ +
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ + K++V DGV+ +I Y+ L+ + VE A + ++ + PDI+TYN +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--A 295
I CK G + + + +G+ ++V+Y +++ GFC++G EA +F E+K+
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 296 TPNHVTYTTLIDGYCK-ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
P+ TY TLI + + ++ A +RE+ + + G A+ ++ + DGR+
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR--FVGDASTIGLVTNMLHDGRL 621
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%)
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
+LD A+ + M +P + ++ +L + + + L +M + + T +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
LIN + + L AL KM++ G +PD T +L++GFC + + A L+ M++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
G+ P +++ ++ G + + +AL D + KG D Y ++ LCK I+ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
L ME I VIY ++ A + A N+ EM +
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 92/203 (45%)
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
D ++ DA L +M + + + + L++A +K+ + +M G+ + +
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
TY LI+ FC+ +L A +L M+ G+ P + + +++G+C + + ++L +
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKT 525
+ G D+ + LI L + + A L M G D V Y + K G
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 526 SVASNVLEEMAKRRLIITAKIYS 548
+A ++L++M + ++ IY+
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYN 260
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 204/396 (51%), Gaps = 2/396 (0%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A+ + ++M Y +P+ +L+ + K G T + ++ +++ + + L+ Y+ +I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
K ++ A L NEME KG+ +I TYN LI +C G + + M + IN
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKV 321
++V+++ LI F KEG++REA + E+ + P+ +TYT+LIDG+CK N LD+A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+LM +KG P + T+N ++ C+ RI D +L +MS + V AD +T NTLI + +
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
+G L A + +M+ + P+ TYK L+ G C E E A E+ + +
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 442 YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
Y+ I+ G C VD L KG+ Y +I LCK + AE LF ME
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 502 GNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
+G + D Y L A+ G + + ++EE+ +
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 218/433 (50%), Gaps = 2/433 (0%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
IH P S L AK++ L + +QM L + +L +++++ +
Sbjct: 80 IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKL 139
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ + ++++ G N ++ LI+ V A +L++ M E G PD+ T NTL
Sbjct: 140 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDA 295
++ C G EA+ + DKM G + V+Y ++ CK G+ A + ++ ++
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
+ V Y+ +IDG CK LD A + ME KG+ + TYN ++ C GR D K
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
LL +M ++K+ + +T + LI+++ K G L+ A + +M+ G+ PD TY +LI GFC
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
K + L+ A +++ M+ G P+ +++ +++GYCK + +D L L + +G+ D
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
Y LI+ C++ ++ A++LF M + + V Y L +G++ A + E++
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 536 AKRRLIITAKIYS 548
K ++ + IY+
Sbjct: 500 EKSKMELDIGIYN 512
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 196/415 (47%), Gaps = 2/415 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E N+ S L+ +AL++ ++M KP L L++ L G
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ ++V+ G N Y +++ KS A +LL +MEE+ + D Y+ +I C
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
K G A ++ ++ME +GI +I++YN LI GFC GR + ++ ++ + PN V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
T++ LID + K +L +A ++ + M +G+ P TY S++ C++ + AN++++ M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
K + T N LIN Y K + L+ KM G+ D TY LI GFC++ +L
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
AKEL M+ P+ +Y ++DG C + L + ++ + LD +Y +
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
I +C +++ A LF + G+ Y + K G S A + +M
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 166/344 (48%), Gaps = 2/344 (0%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
+A +F +M + + ++ +L+ G + K+ + +++ + N+ ++ L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
I + K + A++L EM +G+ PD TY +LI +CK+ +A + D M +G
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTYTTLIDGYCKANELDQALK 320
+ +I ++N LI G+CK R+ + +F + ++ + VTY TLI G+C+ +L+ A +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ + M ++ + P + TY +L LC +G A ++ ++ + K++ D N +I+
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
+ A + G+KP TY +I G CK L A+ L M + G P
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
+Y+ ++ + + + L +E G +DAS + +I L
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 3/274 (1%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
IH ++ + L+ + K A Q+ + M P++ +L++ K
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ ++ +++ GVV + YN LI + + AK+L EM + V P+I TY L
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDA 295
+ C G +AL I +K+E+ + LDI YN +I+G C ++ +A +F + K
Sbjct: 480 LDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P TY +I G CK L +A + ME G P TYN ++R DG + K
Sbjct: 540 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 599
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
L+ E+ D T +I+ S G LK +
Sbjct: 600 LIEELKRCGFSVDASTIKMVIDMLSD-GRLKKSF 632
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 20/277 (7%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
++I K H A QM+D + + DP N + + L+ Y K
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGC---------------DP--NIRTFNILINGYCK 415
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
+ D L++F +M L + L+ + G NV ++ + +V V NI
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y L+ + + E+A ++ ++E+ + DI YN +I C +A + +
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELD 316
+G+ + +YN +I G CK+G + EA +F ++++ P+ TY LI + +
Sbjct: 536 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDAT 595
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
+++K+ E ++ G +T ++ L DGR++ +
Sbjct: 596 KSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKS 631
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%)
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
+Y LR D + DA L +M + I + L +A +K L +M
Sbjct: 55 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
G+ + +T +I+ FC+ +L A + ++ G+ P+ ++S +++G C + V
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
L L D + G D L+ LC + A L M G ++V Y +
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
KSG+T++A +L +M +R + + A YS
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 218/427 (51%), Gaps = 7/427 (1%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
+++ + +++ K +A ++ +M + P L++ L K G + +
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM-EEKGVVPDIFTYNTLISLYCK 243
R+ + +V I+N LIH ++ AK +L++M G+VPD+ TYN+LI Y K
Sbjct: 346 YRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVT 301
+G+ AL + M +G ++ SY L+ GFCK G++ EA + +E+ PN V
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
+ LI +CK + + +A+++ M KG P V T+NS++ LC+ I+ A LL +M
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
+ V A+ +T NTLINA+ + G++K A K N+M+ G D TY +LI G C+ E++
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
A+ L ML G PS S + +++G C+ V+ + E + +G D + +LI
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 482 RRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
LC+ +IE +F ++ GI D+V + +L K G A +L+E + +
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 542 ITAKIYS 548
+ +S
Sbjct: 702 PNHRTWS 708
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 153/581 (26%), Positives = 245/581 (42%), Gaps = 72/581 (12%)
Query: 22 HWGNLLKVNNAPVLSSTTIHQV-------LLQLSLNGYGPSISFPFFKWVESTPHYTHSL 74
W LLK + L ++ H++ LL+L LN S S F W S Y HS
Sbjct: 56 EWEKLLKPFDLDSLRNS-FHKITPFQLYKLLELPLN---VSTSMELFSWTGSQNGYRHSF 111
Query: 75 QCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQ------- 127
+I L FKT ++L ++ R +D Q
Sbjct: 112 DVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLE 171
Query: 128 ----------------VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSL 171
VL LV + A VF M ++ P L V++ +
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILV----SGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAF 227
Query: 172 LKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDI 231
+ + + + + G V N IY LIH+ SK V A QLL EM G VPD
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
Query: 232 FTYNTLISLYCKKGMHYEALSIQDKMEREGINLD-------------------------- 265
T+N +I CK EA + ++M G D
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347
Query: 266 -----IVSYNSLIYGFCKEGRMREATRMFSEIKDA---TPNHVTYTTLIDGYCKANELDQ 317
IV +N+LI+GF GR+ +A + S++ + P+ TY +LI GY K +
Sbjct: 348 IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
AL+V M KG P V +Y ++ C+ G+I +A +LNEMS ++ + + N LI+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
A+ K + A++ +M G KPD +T+ +LI G C++DE++ A LL M+ G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
+ +Y+ +++ + ++ + L +E + +G LD Y +LI+ LC+ +++ A LF
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 498 YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
M +G + ++ L +SG A +EM R
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 182/382 (47%), Gaps = 7/382 (1%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRL-YQLKPHLPACTVLLSSLLKDGTTNVV 180
P+ + + L+ + DA V M Y + P + L+ K+G +
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
++ + G N+Y Y L+ K ++ A +LNEM G+ P+ +N LIS
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPN 298
+CK+ EA+ I +M R+G D+ ++NSLI G C+ ++ A + ++ + N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
VTY TLI+ + + E+ +A K+ M +G TYNS+++ LC+ G + A L
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD 418
+M NI+CN LIN + G ++ A++F+ +M+ G PD T+ +LI+G C+
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 419 ELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV-DAILALPDEFLSKGLCLDASVY 477
+E + + G P +++ ++ CK V DA L L DE + G + +
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL-DEGIEDGFVPNHRTW 707
Query: 478 RALIRRLCKIEQIECAEKLFYH 499
L++ + E ++ + FY+
Sbjct: 708 SILLQSIIPQETLD--RRRFYN 727
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 144/262 (54%), Gaps = 4/262 (1%)
Query: 120 DDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK-DGTTN 178
D + N+ + L+ + K +A+++F +M KP + L+S L + D +
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
+W + + ++ +GVV N YN LI+A + +++ A++L+NEM +G D TYN+LI
Sbjct: 513 ALWLL-RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDAT 296
C+ G +A S+ +KM R+G +S N LI G C+ G + EA E ++ +T
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P+ VT+ +LI+G C+A ++ L + ++A+G+ P T+N+++ LC+ G + DA L
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 357 LNEMSEKKVQADNITCNTLINA 378
L+E E ++ T + L+ +
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQS 713
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 9/223 (4%)
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS-----EKKVQADNITCNTLINAY 379
M+ +G+ + + SI+R + G +L+ EM E ++ N+ L++
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
K A ML + P FT+ ++ FC ++E++SA LL M G P+
Sbjct: 197 CH----KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNS 252
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
Y ++ K + V+ L L +E G DA + +I LCK ++I A K+
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLII 542
M G + D + Y L K G+ A ++ + K ++I
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI 355
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 192/397 (48%), Gaps = 5/397 (1%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
++ + E M + P + CT L+ + G T KI + L G V ++ YN +
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM 178
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
I K+ ++ A +L+ M V PD+ TYNT++ C G +A+ + D+M +
Sbjct: 179 ISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALK 320
D+++Y LI C++ + A ++ E++D TP+ VTY L++G CK LD+A+K
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
M + G P V T+N ILR +C GR DA KLL +M K +T N LIN
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
+ G L A+ KM + G +P+ +Y L+HGFCK +++ A E L M+ G P
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM 500
+Y+ ++ CK V+ + + ++ SKG Y +I L K + A KL M
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 501 EGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
+ D++ Y+SL + GK A E +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 194/383 (50%), Gaps = 5/383 (1%)
Query: 168 LSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGV 227
L +++ G +K + +V G V +I LI + +A ++L +E G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 228 VPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATR 287
VPD+ TYN +IS YCK G ALS+ D+M ++ D+V+YN+++ C G++++A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 288 MFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
+ + +D P+ +TYT LI+ C+ + + A+K+ + M +G P V TYN ++ +C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
++GR+ +A K LN+M Q + IT N ++ + G A K ML G P
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
T+ LI+ C+ L A ++L M G P+ SY+ ++ G+CK+ +D + +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKT 525
+S+G D Y ++ LCK ++E A ++ + G S + Y ++ K+GKT
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 526 SVASNVLEEMAKRRLIITAKIYS 548
A +L+EM + L YS
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYS 488
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 207/399 (51%), Gaps = 29/399 (7%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
+++ L K A ++LD++ RD V+++ ++ A
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCY-------------------PDVITYTILIEAT 249
Query: 139 SRMTQ--DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNI 196
R + A+++ ++MR P + VL++ + K+G + K + G N+
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 197 YIYNCLIHA-CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+N ++ + CS R ++ A++LL +M KG P + T+N LI+ C+KG+ A+ I +
Sbjct: 310 ITHNIILRSMCSTGRWMD-AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREAT----RMFSEIKDATPNHVTYTTLIDGYCK 311
KM + G + +SYN L++GFCKE +M A RM S + P+ VTY T++ CK
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS--RGCYPDIVTYNTMLTALCK 426
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
+++ A+++ + +KG P + TYN+++ L + G+ A KLL+EM K ++ D IT
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
++L+ S+ G + A+KF ++ G++P+ T+ +++ G CK + + A + L M+
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
+ G P+ SY+ +++G + L L +E +KGL
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 200/411 (48%), Gaps = 5/411 (1%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
+ L+ + + T+ A ++ E + P + V++S K G N + R+
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-- 198
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
V ++ YN ++ + S +++A ++L+ M ++ PD+ TY LI C+
Sbjct: 199 -SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLID 307
A+ + D+M G D+V+YN L+ G CKEGR+ EA + +++ + PN +T+ ++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
C A K+ M KG P V T+N ++ LC+ G + A +L +M + Q
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
++++ N L++ + K + A+++ +M+ G PD TY ++ CK ++E A E+L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
+ G +P +Y+ ++DG K + L DE +K L D Y +L+ L +
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
+++ A K F+ E GI ++V + S+ KS +T A + L M R
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 185/390 (47%), Gaps = 40/390 (10%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
++ Y K+ +AL V ++M + P + +L SL G ++ R++Q
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
++ Y LI A + V A +LL+EM ++G PD+ TYN L++ CK+G EA+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI------------------- 292
+ M G +++++N ++ C GR +A ++ +++
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 293 ------------------KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGV 334
PN ++Y L+ G+CK ++D+A++ E M ++G YP +
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 335 ATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNK 394
TYN++L LC+DG++ DA ++LN++S K IT NT+I+ +K G A+K ++
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 395 MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDN 454
M LKPD TY +L+ G + +++ A + G P+ +++ I+ G CK
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 455 VDAILALPDEFLSKGLCLDASVYRALIRRL 484
D + +++G + + Y LI L
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 3/198 (1%)
Query: 338 NSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLE 397
N+ LR++ + G + + K L M D I C TLI + ++G + A K +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 398 SGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDA 457
SG PD TY +I G+CK E+ +A +L M +P +Y+ I+ C +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 458 ILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAY 517
+ + D L + D Y LI C+ + A KL M G + D V Y L
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 518 AYWKSGKTSVASNVLEEM 535
K G+ A L +M
Sbjct: 283 GICKEGRLDEAIKFLNDM 300
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 207/402 (51%), Gaps = 2/402 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
+A+ + ++M +P+L V+++ L K G ++ + + ++ + ++ I+N
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I + K R V+ A L EME KG+ P++ TY++LIS C G +A + M +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
IN ++V++N+LI F KEG+ EA ++ ++ + P+ TY +LI+G+C + LD+A
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
++ E M +K +P + TYN++++ C+ R+ D +L EMS + + D +T TLI
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
GD +A K +M+ G+ PD TY L+ G C +LE A E+ M +
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
Y+ +++G CK VD L KG+ + Y +I LC ++ A L
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
M+ +G DS Y +L A+ + G + ++ ++ EM R +
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 532
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 212/414 (51%), Gaps = 2/414 (0%)
Query: 137 AKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNI 196
AK + + + E+M+ + +L +L++ + ++ + ++++ G +I
Sbjct: 21 AKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSI 80
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
+ L++ + + A L+++M E G PD T+ TLI EA+++ D+
Sbjct: 81 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 140
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANE 314
M + G ++V+Y ++ G CK G + A + ++++ A + V + T+ID CK
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+D AL + + ME KG+ P V TY+S++ LC GR DA++LL++M EKK+ + +T N
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
LI+A+ K G A K + M++ + PD FTY +LI+GFC D L+ AK++ M+
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
P +Y+ ++ G+CK V+ L E +GL D Y LI+ L + A+
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
K+F M +G+ D + Y+ L +GK A V + M K + + IY+
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 176/356 (49%), Gaps = 2/356 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E + + + ++ K R DAL +F++M ++P++ + L+S L G + +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ +++ + N+ +N LI A K A++L ++M ++ + PDIFTYN+LI+ +C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
+A + + M + D+ +YN+LI GFCK R+ + T +F E+ + + V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYTTLI G + D A KV + M + G+ P + TY+ +L LC +G++ A ++ + M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ +++ D T+I K G + + G+KP+ TY +I G C L
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
+ A LL M + G P +Y+ ++ + + + A L E S DAS
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 537
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 122/268 (45%), Gaps = 7/268 (2%)
Query: 117 RIHDD---PEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSL 171
++HDD ++ + ++ L+ + A Q+FE M P L L+
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 172 LKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDI 231
K ++ + + G+V + Y LI D + A+++ +M GV PDI
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 232 FTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE 291
TY+ L+ C G +AL + D M++ I LDI Y ++I G CK G++ + +F
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 292 I--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGR 349
+ K PN VTY T+I G C L +A + + M+ G P TYN+++R +DG
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 350 IRDANKLLNEMSEKKVQADNITCNTLIN 377
+ +L+ EM + D T + N
Sbjct: 516 KAASAELIREMRSCRFVGDASTIGLVAN 543
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 121/244 (49%)
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P+ + L+ K + D + + E M+ G+ + TYN ++ C+ +I A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
L +M + + +T ++L+N Y + A+ ++M+E G +PD T+ LIHG
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
++ A L+ M+ G P+ +Y +V+G CK+ ++D L ++ + + D +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 477 YRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
+ +I LCK ++ A LF ME GI + V Y+SL G+ S AS +L +M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 537 KRRL 540
++++
Sbjct: 248 EKKI 251
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 218/452 (48%), Gaps = 37/452 (8%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
Y + M ++ L+VF+ M L +C V L + K ++ +I +R+V GV +
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK----------- 244
+Y ++ + +VE++K+L+ E KG+ P+ +TYNT+I+ Y K+
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 245 ------------------------GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEG 280
G +A + D+M GI D+ Y SLI C++G
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 281 RMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYN 338
M+ A +F E+ K +P+ TY LIDG CK E+ A + M++KG+ +N
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 339 SILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES 398
+++ C+ G + +A+ + + M +K QAD TCNT+ + ++++ A ++ +M+E
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463
Query: 399 GLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAI 458
G+K +Y LI +CK +E AK L M G P+ +Y+ ++ YCK+ +
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 459 LALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
L + G+ D+ Y +LI C + ++ A +LF M G+ +SV YT +
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583
Query: 519 YWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
K+GK+ A + +EM ++ I K+Y+
Sbjct: 584 LSKAGKSDEAFGLYDEMKRKGYTIDNKVYTAL 615
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 181/372 (48%), Gaps = 37/372 (9%)
Query: 147 QVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHAC 206
++ ++ + +KP ++++ +K + V + K + +DGVV N Y L+
Sbjct: 245 KLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELS 304
Query: 207 SKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDI 266
K+ + A++L +EM E+G+ D+ Y +LIS C+KG A + D++ +G++
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Query: 267 VSYNSLIYGFCKEGRMREATRMFSEIKDATPN--HVTYTTLIDGYCKANELDQALKVREL 324
+Y +LI G CK G M A + +E++ N V + TLIDGYC+ +D+A + ++
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDV 424
Query: 325 MEAKGLYPGVATYNSI------LRKL-----------------------------CQDGR 349
ME KG V T N+I L++ C++G
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 350 IRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
+ +A +L EMS K VQ + IT N +I AY K G +K A K + M +G+ PD +TY +
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKG 469
LIHG C D ++ A L M G + +Y+ ++ G K D L DE KG
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Query: 470 LCLDASVYRALI 481
+D VY ALI
Sbjct: 605 YTIDNKVYTALI 616
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 146/336 (43%), Gaps = 54/336 (16%)
Query: 80 MIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKS 139
++++ K A+++ D++ R I D V + ++SW + K
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERG-------------IESDVHVYTSLISW---NCRKG 343
Query: 140 RMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIY 199
M + A +F+++ L P L+ + K G + + GV + ++
Sbjct: 344 NMKR-AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 200 NCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT----------------------- 236
N LI + V+ A + + ME+KG D+FT NT
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 237 ------------LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
LI +YCK+G EA + +M +G+ + ++YN +IY +CK+G+++E
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 285 ATRMFS--EIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A ++ + E P+ TYT+LI G C A+ +D+A+++ M KGL TY ++
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
L + G+ +A L +EM K DN LI +
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 108/238 (45%), Gaps = 5/238 (2%)
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
+ R +G + ++ + M +K + D +C + A K + L+ +M++SG
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAIL 459
+K ++ ++ G C+ E+E +K+L+ G P +Y+ I++ Y K+ + +
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 460 ALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAY 519
+ G+ + Y L+ K ++ AEKLF M GI D +YTSL
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 520 WKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDG---HGENKVSQMFWDHVVERGL 574
+ G A + +E+ ++ L ++ Y ++ DG GE +++ + + +G+
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYG--ALIDGVCKVGEMGAAEILMNEMQSKGV 395
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 217/443 (48%), Gaps = 37/443 (8%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
DA+ +F++M + +P L + L S + + ++V + K++ G+ N+Y + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
I+ C + R + A + ++ + G PD T++TLI+ C +G EAL + D+M G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVT------------------- 301
+++ N+L+ G C G++ +A + + + PN VT
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 302 ----------------YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
Y+ +IDG CK LD A + ME KG + Y +++R C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
GR D KLL +M ++K+ D + + LI+ + K G L+ A + +M++ G+ PD
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
TY +LI GFCK ++L+ A +L M+ G P+ +++ +++GYCK + +D L L +
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKT 525
+G+ D Y LI+ C++ ++E A++LF M + D V Y L +G+
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 526 SVASNVLEEMAKRRLIITAKIYS 548
A + E++ K ++ + IY+
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYN 496
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 215/428 (50%), Gaps = 4/428 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
DA+ + ++M +P+ +L + K G T + ++ +++ + + L+ Y+
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I K ++ A L NEME KG DI Y TLI +C G + + M +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
I D+V++++LI F KEG++REA + E+ + +P+ VTYT+LIDG+CK N+LD+A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+ +LM +KG P + T+N ++ C+ I D +L +MS + V AD +T NTLI +
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
++G L+ A + +M+ ++PD +YK L+ G C E E A E+ + +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
Y+ I+ G C VD L KG+ D Y +I LCK + A+ LF
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGEN 559
ME +G S + Y L A+ G + ++ ++EE+ +R + + V D +
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI--KRCGFSVDASTVKMVVDMLSDG 610
Query: 560 KVSQMFWD 567
++ + F D
Sbjct: 611 RLKKSFLD 618
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 196/415 (47%), Gaps = 2/415 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E ++ S L+ +AL++ ++M KP L L++ L +G +
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ R+V+ G N Y ++ KS A +LL +MEE+ + D Y+ +I C
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
K G A ++ ++ME +G DI+ Y +LI GFC GR + ++ ++ + TP+ V
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
++ LID + K +L +A ++ + M +G+ P TY S++ C++ ++ AN +L+ M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
K + T N LIN Y K + L+ KM G+ D TY LI GFC++ +L
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
E AKEL M+ P SY ++DG C + L + ++ + LD +Y +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
I +C +++ A LF + G+ D Y + K G S A + +M
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 170/357 (47%), Gaps = 2/357 (0%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S ++ K +A +F +M + K + T L+ G + K+ + +++
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
+ ++ ++ LI K + A++L EM ++G+ PD TY +LI +CK+ +
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTYTTLID 307
A + D M +G +I ++N LI G+CK + + +F + ++ + VTY TLI
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
G+C+ +L+ A ++ + M ++ + P + +Y +L LC +G A ++ ++ + K++
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
D N +I+ + A + G+KPD TY +I G CK L A L
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
M + G +P+ C+Y+ ++ + + + L +E G +DAS + ++ L
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 148/314 (47%), Gaps = 9/314 (2%)
Query: 267 VSYNSLIYGFCKEGRMREATRMFSEIKDATPNH--VTYTTLIDGYCKANELDQALKVREL 324
VSY + + + +A +F E+ + P + ++ L + + D L + +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGD 384
ME KG+ + T + ++ C+ ++ A + ++ + + D +T +TLIN G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 385 LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW 444
+ AL+ ++M+E G KP T AL++G C ++ A L+ M++ GF P+ +Y
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 445 IVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNG 504
++ CK + L + + + LDA Y +I LCK ++ A LF ME G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 505 ISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL----IITAKIYSCFSVPDGHGENK 560
D +IYT+L + +G+ + +L +M KR++ + + + CF G+ +
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV---KEGKLR 334
Query: 561 VSQMFWDHVVERGL 574
++ +++RG+
Sbjct: 335 EAEELHKEMIQRGI 348
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 3/262 (1%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
+ L+ + K A + + M P++ +L++ K + ++ +++
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
GVV + YN LI + +E AK+L EM + V PDI +Y L+ C G +
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLID 307
AL I +K+E+ + LDI YN +I+G C ++ +A +F + K P+ TY +I
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
G CK L +A + ME G P TYN ++R +G + KL+ E+
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595
Query: 368 DNITCNTLINAYSKIGDLKSAL 389
D T +++ S G LK +
Sbjct: 596 DASTVKMVVDMLSD-GRLKKSF 616
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 108/229 (47%), Gaps = 3/229 (1%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N + + L+ Y K+ + D L++F +M L + L+ + G V ++
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ +V V +I Y L+ + + E+A ++ ++E+ + DI YN +I C
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTY 302
+A + + +G+ D+ +YN +I G CK+G + EA +F ++++ +PN TY
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIR 351
LI + + ++ K+ E ++ G +T ++ L DGR++
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML-SDGRLK 613
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 93/216 (43%)
Query: 333 GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFK 392
G +Y LR D + DA L EM+ + + I + L + ++ L
Sbjct: 36 GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 393 NKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKK 452
+M G+ + +T +I+ C+ +L A + ++ G+ P ++S +++G C +
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 453 DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
V L L D + G AL+ LC ++ A L M G + V Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 513 TSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
+ KSG+T++A +L +M +R++ + A YS
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 240/523 (45%), Gaps = 56/523 (10%)
Query: 56 ISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXX 115
++ FF W + Y H ++M+++L+K K + ++++L + R
Sbjct: 189 VALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRG----------- 237
Query: 116 XRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
I+ PE S+V+ + Y+++ +DAL+V M+ ++P+L C + ++
Sbjct: 238 --IYRTPEAFSRVM----VSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRAN 291
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM------------- 222
+ +R+ G+V N+ YNC+I VE A +LL +M
Sbjct: 292 RLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYY 351
Query: 223 -----------------------EEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER 259
+E G+VPD TYNTLI + K EAL +
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQE 411
Query: 260 EGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPNHVTYTTLIDGYCKANELD 316
+G +D + Y+++++ CKEGRM EA + +E+ P+ VTYT +++G+C+ E+D
Sbjct: 412 KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVD 471
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+A K+ ++M G P +Y ++L +C+ G+ +A +++N E ++IT + ++
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIM 531
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
+ + G L A +M+ G P P L+ C+ A++ + L+ G
Sbjct: 532 HGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCA 591
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
+ +++ ++ G+C+ D +DA L++ D+ D Y L+ L K +I A +L
Sbjct: 592 INVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATEL 651
Query: 497 FYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
M GI V Y ++ + Y + GK +LE+M R+
Sbjct: 652 MKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ 694
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 196/415 (47%), Gaps = 11/415 (2%)
Query: 174 DGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKG-VVPDIF 232
D +W + K + G ++ Y+ ++HA K + AK L+NEM KG PD+
Sbjct: 397 DHADEALWFL-KDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455
Query: 233 TYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF--S 290
TY +++ +C+ G +A + M G + VSY +L+ G C+ G+ EA M S
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS 515
Query: 291 EIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
E +PN +TY+ ++ G + +L +A V M KG +PG N +L+ LC+DGR
Sbjct: 516 EEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRT 575
Query: 351 RDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
+A K + E K + + T+I+ + + +L +AL + M D FTY L
Sbjct: 576 HEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTL 635
Query: 411 IHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
+ K + A EL+ ML G P+ +Y ++ YC+ VD ++A+ ++ +S+
Sbjct: 636 VDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQK 695
Query: 471 CLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASN 530
C ++Y +I +LC + ++E A+ L + D+ +L Y K G A
Sbjct: 696 C--RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYK 753
Query: 531 VLEEMAKRRLIITAKIYSCFS---VPDGHGENKVSQMFWDHVVERGLMSRNTMRK 582
V M R LI K+ S V G + M +VERG +S ++++
Sbjct: 754 VACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLML--RLVERGHISPQSLKQ 806
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A V +M L P +LL SL +DG T+ K + + G +N+ + +I
Sbjct: 542 EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI 601
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
H ++ +++ A +L++M D+FTY TL+ KKG EA + KM +GI+
Sbjct: 602 HGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGID 661
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRE 323
V+Y ++I+ +C+ G++ + + ++ Y +I+
Sbjct: 662 PTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIE---------------- 705
Query: 324 LMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
KLC G++ +A+ LL ++ ++D TC L+ Y K G
Sbjct: 706 -------------------KLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKG 746
Query: 384 DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
SA K +M L PD + L +++ A +L+ +++ G
Sbjct: 747 VPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 205/415 (49%), Gaps = 2/415 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E+N +V + + + ++F +M + L LL L K G K
Sbjct: 178 EMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEK 237
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ ++++ GV+ N++ YN I + +++ A +++ + E+G PD+ TYN LI C
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHV 300
K EA KM EG+ D +YN+LI G+CK G ++ A R+ + P+
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TY +LIDG C E ++AL + KG+ P V YN++++ L G I +A +L NEM
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
SEK + + T N L+N K+G + A M+ G PD FT+ LIHG+ ++
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
E+A E+L MLD G P +Y+ +++G CK + ++ + KG + + L
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ LC+ +++ A L M+ ++ D+V + +L + K+G A + +M
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 224/488 (45%), Gaps = 26/488 (5%)
Query: 54 PSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXX 113
P + F + + H+L ++I+ L Y F+ +++L + R+
Sbjct: 20 PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL--VDMRE--------- 68
Query: 114 XXXRIHDDPEVNSQVLSWLVI----HYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLS 169
V + +L + + +Y + Q+A+ VFE+M Y +P + + ++S
Sbjct: 69 ---------NVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMS 119
Query: 170 SLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVP 229
L+ G + K++ R+ G+ ++Y + + + K+ A +LLN M +G
Sbjct: 120 VLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM 179
Query: 230 DIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF 289
++ Y T++ + ++ E + KM G++L + ++N L+ CK+G ++E ++
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 290 SEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD 347
++ + PN TY I G C+ ELD A+++ + +G P V TYN+++ LC++
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 348 GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
+ ++A L +M + ++ D+ T NTLI Y K G ++ A + + +G PD FTY
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 408 KALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
++LI G C E A L L G P+ Y+ ++ G + + L +E
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 468 KGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSV 527
KGL + + L+ LCK+ + A+ L M G D + L + Y K
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 528 ASNVLEEM 535
A +L+ M
Sbjct: 480 ALEILDVM 487
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 189/396 (47%), Gaps = 3/396 (0%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+++ E +S + L+ Y K M Q A ++ P L+ L +G T
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
N + + G+ N+ +YN LI S + A QL NEM EKG++P++ T+N L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--A 295
++ CK G +A + M +G DI ++N LI+G+ + +M A + + D
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ TY +L++G CK ++ + ++ + M KG P + T+N +L LC+ ++ +A
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES-GLKPDPFTYKALIHGF 414
LL EM K V D +T TLI+ + K GDL A KM E+ + TY +IH F
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
+ + A++L M+D P +Y +VDG+CK NV+ E + G
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSL 672
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSV 510
+ +I LC +++ A + + M G+ ++V
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 206/486 (42%), Gaps = 21/486 (4%)
Query: 80 MIQILAKYKHFKTAQQMLDKIAHRD-----FXXXXXXXXXXXR-------------IHDD 121
++++L K K +++LDK+ R F R I
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
P+ + + L+ K+ Q+A +M L+P L++ K G +
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+I V +G V + + Y LI + RA L NE KG+ P++ YNTLI
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNH 299
+GM EA + ++M +G+ ++ ++N L+ G CK G + +A + + K P+
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
T+ LI GY +++ AL++ ++M G+ P V TYNS+L LC+ + D +
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
M EK + T N L+ + + L AL +M + PD T+ LI GFCK +
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 420 LESAKELLFGMLDA-GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
L+ A L M +A + S +Y+ I+ + +K NV L E + + L D YR
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
++ CK + K M NG + + A+ ++ M ++
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 539 RLIITA 544
L+ A
Sbjct: 702 GLVPEA 707
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 176/370 (47%), Gaps = 12/370 (3%)
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNS 271
V+ A + M+ P +F+YN ++S+ G +A + +M GI D+ S+
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 272 LIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKG 329
+ FCK R A R+ + + + N V Y T++ G+ + N + ++ M A G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 330 LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
+ ++T+N +LR LC+ G +++ KLL+++ ++ V + T N I + G+L A+
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 390 KFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGY 449
+ ++E G KPD TY LI+G CK + + A+ L M++ G P +Y+ ++ GY
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 450 CKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDS 509
CK V + + + G D YR+LI LC + A LF G GI +
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 510 VIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS----------CFSVPDGHGEN 559
++Y +L G A+ + EM+++ LI + ++ C S DG +
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 560 KVSQMFWDHV 569
+S+ ++ +
Sbjct: 452 MISKGYFPDI 461
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 150/368 (40%), Gaps = 44/368 (11%)
Query: 249 EALSIQDKMERE-GINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHV---TYTT 304
+AL + + M +E G + +Y S+I G+ + ++++ NH+ Y
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG----------RIRD-- 352
+ Y + ++ +A+ V E M+ P V +YN+I+ L G R+RD
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 353 -----------------------ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
A +LLN MS + + + + T++ + +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 390 KFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGY 449
+ KML SG+ T+ L+ CK +++ ++LL ++ G P+ +Y+ + G
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 450 CKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDS 509
C++ +D + + + +G D Y LI LCK + + AE M G+ DS
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 510 VIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDG---HGENKVSQMFW 566
Y +L Y K G +A ++ + + Y S+ DG GE + +
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYR--SLIDGLCHEGETNRALALF 379
Query: 567 DHVVERGL 574
+ + +G+
Sbjct: 380 NEALGKGI 387
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 102/256 (39%), Gaps = 7/256 (2%)
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P HVT C+ + + + + G ++TY S++ KL G+ ++
Sbjct: 7 PKHVTAVI----KCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62
Query: 357 LNEMSEK--KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
L +M E + + + N Y + G ++ A+ +M +P F+Y A++
Sbjct: 63 LVDMRENVGNHMLEGVYVGAMKN-YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVL 121
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
+ A ++ M D G TP S++ + +CK A L L + S+G ++
Sbjct: 122 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 181
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
Y ++ + +LF M +G+S + L K G +L++
Sbjct: 182 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 241
Query: 535 MAKRRLIITAKIYSCF 550
+ KR ++ Y+ F
Sbjct: 242 VIKRGVLPNLFTYNLF 257
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 210/398 (52%), Gaps = 9/398 (2%)
Query: 126 SQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK 185
S+VLS + AKS+ + +F M + + L + ++++ L + + +
Sbjct: 73 SKVLSKI----AKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVG 128
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
++++ G ++ + LI+ + V A L+++MEE G PD+ YNT+I CK G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTYT 303
+ +A+ + D+MER+G+ D V+YNSL+ G C GR +A R+ + ++D PN +T+T
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 304 TLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
+ID + K + +A+K+ E M + + P V TYNS++ LC GR+ +A ++L+ M K
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
D +T NTLIN + K + K +M + GL D TY +I G+ + ++A
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
+E +F +D+ P+ +YS ++ G C V+ L L + + LD + Y +I
Sbjct: 369 QE-IFSRMDS--RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWK 521
+CKI +E A LF + G+ D V YT++ + +
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 197/386 (51%), Gaps = 11/386 (2%)
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
+++Q + +I ++ ++ +KS++ + L + ME G+ D+++YN +I+ C+
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYT 303
ALS+ KM + G D+V+ +SLI GFC+ R+ +A + S++++ P+ V Y
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 304 TLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
T+IDG CK ++ A+++ + ME G+ TYNS++ LC GR DA +L+ +M +
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
+ + IT +I+ + K G A+K +M + PD FTY +LI+G C ++ A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
K++L M+ G P +Y+ +++G+CK VD L E +GL D Y +I+
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIIT 543
+ + + A+++F M+ + Y+ L Y + + A + E M K + +
Sbjct: 359 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 544 AKIYSCFSVPDGHGENKVSQM--FWD 567
Y+ HG K+ + WD
Sbjct: 416 ITTYNIVI----HGMCKIGNVEDAWD 437
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 154/299 (51%), Gaps = 5/299 (1%)
Query: 141 MTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYN 200
+ DA+++F++M ++ L++ L G + ++ + +V +V N+ +
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 201 CLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMERE 260
+I K A +L EM + V PD+FTYN+LI+ C G EA + D M +
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 261 GINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQA 318
G D+V+YN+LI GFCK R+ E T++F E+ + + +TY T+I GY +A D A
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 319 LKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
++ M+++ P + TY+ +L LC + R+ A L M + +++ D T N +I+
Sbjct: 369 QEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 379 YSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
KIG+++ A + GLKPD +Y +I GFC+ + + + L M + G P
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 160/340 (47%), Gaps = 2/340 (0%)
Query: 209 SRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVS 268
S ++E L +M + +P I ++ ++S K + +S+ ME GI D+ S
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 269 YNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELME 326
YN +I C+ R A + ++ P+ VT ++LI+G+C+ N + A+ + ME
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 327 AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLK 386
G P V YN+I+ C+ G + DA +L + M V+AD +T N+L+ G
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 387 SALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
A + M+ + P+ T+ A+I F K + A +L M P +Y+ ++
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 447 DGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGIS 506
+G C VD + D ++KG D Y LI CK ++++ KLF M G+
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 507 GDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKI 546
GD++ Y ++ Y+++G+ A + M R I T I
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSI 386
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 210/407 (51%), Gaps = 2/407 (0%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
DA+ +F++M + P L + S++ + N+V K+L +G+ NIY N +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
+ + A +L ++ + G PD T+NTLI +G EA+ + D+M G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKV 321
D+V+YNS++ G C+ G A + ++ ++ + TY+T+ID C+ +D A+ +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+ ME KG+ V TYNS++R LC+ G+ D LL +M +++ + IT N L++ + K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
G L+ A + +M+ G+ P+ TY L+ G+C + L A +L M+ +P +
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 442 YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
++ ++ GYC VD + + +GL +A Y L++ C+ +I+ AE+LF M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 502 GNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
+G+ D + Y L +GK A + E++ K ++ + +Y+
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 195/380 (51%), Gaps = 2/380 (0%)
Query: 158 KPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQ 217
+P L+ L +G + + R+V++G ++ YN +++ +S D A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 218 LLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFC 277
LL +MEE+ V D+FTY+T+I C+ G A+S+ +ME +GI +V+YNSL+ G C
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 278 KEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVA 335
K G+ + + ++ ++ PN +T+ L+D + K +L +A ++ + M +G+ P +
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
TYN+++ C R+ +AN +L+ M K D +T +LI Y + + +K +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
+ GL + TY L+ GFC+ +++ A+EL M+ G P +Y ++DG C +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+ L + ++ + L +Y +I +CK ++E A LF + G+ + + YT +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 516 AYAYWKSGKTSVASNVLEEM 535
K G S A+ +L +M
Sbjct: 515 ISGLCKKGSLSEANILLRKM 534
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 183/380 (48%), Gaps = 2/380 (0%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
+V +S T AL + +M +K + + ++ SL +DG + + K + G
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ ++ YN L+ K+ LL +M + +VP++ T+N L+ ++ K+G EA
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGY 309
+ +M GI+ +I++YN+L+ G+C + R+ EA M + +P+ VT+T+LI GY
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
C +D +KV + +GL TY+ +++ CQ G+I+ A +L EM V D
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
+T L++ G L+ AL+ + +S + Y +I G CK ++E A L
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
+ G P+ +Y+ ++ G CKK ++ L + G + Y LIR +
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 490 IECAEKLFYHMEGNGISGDS 509
+ + KL M+ G S D+
Sbjct: 559 LTASAKLIEEMKSCGFSADA 578
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 174/342 (50%), Gaps = 2/342 (0%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A+ +F++M +K + L+ L K G N + K +V +V N+ +N L+
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
K ++ A +L EM +G+ P+I TYNTL+ YC + EA ++ D M R +
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVR 322
DIV++ SLI G+C R+ + ++F I + N VTY+ L+ G+C++ ++ A ++
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
+ M + G+ P V TY +L LC +G++ A ++ ++ + K+ + T+I K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSY 442
G ++ A + G+KP+ TY +I G CK L A LL M + G P+ C+Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 443 SWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
+ ++ + + ++ A L +E S G DAS + +I L
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 105/218 (48%), Gaps = 2/218 (0%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
+ L+ Y + D ++VF + L + ++L+ + G + ++ + +V
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
GV+ ++ Y L+ + +E+A ++ ++++ + I Y T+I CK G
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLI 306
+A ++ + +G+ ++++Y +I G CK+G + EA + ++++ PN TY TLI
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL 344
+ + +L + K+ E M++ G ++ ++ L
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N+ S LV + +S + A ++F++M + + P + +LL L +G +I
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ L + + L I +Y +I K VE A L + KGV P++ TY +IS CKK
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK 293
G EA + KME +G + +YN+LI ++G + + ++ E+K
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 207/442 (46%), Gaps = 38/442 (8%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQD-GVVLNIYIYNCLI 203
AL V++QM +++ P + C++++++ + G + K G+ LN+ YN LI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA------------- 250
+ + DVE ++L M E+GV ++ TY +LI YCKKG+ EA
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 251 ----------------------LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRM 288
+ + D M G+ + NSLI G+CK G++ EA ++
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 289 FSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQ 346
FS + D + P+H TY TL+DGYC+A +D+ALK+ + M K + P V TYN +L+ +
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 347 DGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFT 406
G D L M ++ V AD I+C+TL+ A K+GD A+K +L GL D T
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 407 YKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFL 466
+I G CKM+++ AKE+L + P+ +Y + GY K N+ A+ +
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 467 SKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTS 526
KG+ +Y LI K + L + G++ Y +L + G
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 527 VASNVLEEMAKRRLIITAKIYS 548
A EM ++ + + I S
Sbjct: 629 KAYATCFEMIEKGITLNVNICS 650
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 137/537 (25%), Positives = 241/537 (44%), Gaps = 54/537 (10%)
Query: 35 LSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQ 94
S ++ +L +L LN P F + + M+ IL++ ++++ +
Sbjct: 68 FSDELLNSILRRLRLN---PEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTK 124
Query: 95 QMLDKIA---HRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQ 151
L ++ H F R+ + + V ++ YA+ + ++AL VF+
Sbjct: 125 SYLCELVALNHSGFVVWGELV----RVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDN 180
Query: 152 MRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRD 211
M Y P L +C LLS+L++ G ++ V L++Y
Sbjct: 181 MGNYGRIPSLLSCNSLLSNLVRKG-------------ENFVALHVY-------------- 213
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMERE-GINLDIVSYN 270
++M V PD+FT + +++ YC+ G +A+ + E G+ L++V+YN
Sbjct: 214 --------DQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYN 265
Query: 271 SLIYGFCKEGR---MREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEA 327
SLI G+ G M R+ SE + + N VTYT+LI GYCK +++A V EL++
Sbjct: 266 SLINGYAMIGDVEGMTRVLRLMSE-RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKE 324
Query: 328 KGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKS 387
K L Y ++ C+ G+IRDA ++ + M E V+ + CN+LIN Y K G L
Sbjct: 325 KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE 384
Query: 388 ALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVD 447
A + ++M + LKPD TY L+ G+C+ ++ A +L M P+ +Y+ ++
Sbjct: 385 AEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK 444
Query: 448 GYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISG 507
GY + +L+L L +G+ D L+ L K+ A KL+ ++ G+
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLT 504
Query: 508 DSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQM 564
D++ + K K + A +L+ + R + Y S HG KV +
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALS----HGYYKVGNL 557
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 191/381 (50%), Gaps = 4/381 (1%)
Query: 117 RIHDDPEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKD 174
R+ + V+ V+++ L+ Y K + ++A VFE ++ +L VL+ +
Sbjct: 285 RLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRT 344
Query: 175 GTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTY 234
G ++H +++ GV N I N LI+ KS + A+Q+ + M + + PD TY
Sbjct: 345 GQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTY 404
Query: 235 NTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI-- 292
NTL+ YC+ G EAL + D+M ++ + +++YN L+ G+ + G + ++ +
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 293 KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
+ + ++ +TL++ K + ++A+K+ E + A+GL T N ++ LC+ ++ +
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
A ++L+ ++ + + T L + Y K+G+LK A K M G+ P Y LI
Sbjct: 525 AKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 413 GFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL 472
G K L +L+ + G TP+ +Y ++ G+C +D A E + KG+ L
Sbjct: 585 GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Query: 473 DASVYRALIRRLCKIEQIECA 493
+ ++ + L ++++I+ A
Sbjct: 645 NVNICSKIANSLFRLDKIDEA 665
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/506 (24%), Positives = 206/506 (40%), Gaps = 81/506 (16%)
Query: 117 RIHDD-----PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSL 171
R+HD+ N+ + + L+ Y KS +A Q+F +M + LKP L+
Sbjct: 352 RVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 172 LKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDI 231
+ G + K+ ++ Q VV + YN L+ S+ L M ++GV D
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 232 FTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE 291
+ +TL+ K G EA+ + + + G+ D ++ N +I G CK ++ EA +
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 292 IK--DATPNHVTYTTLIDGYCKANELDQALKVRELME----------------------- 326
+ P TY L GY K L +A V+E ME
Sbjct: 532 VNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRH 591
Query: 327 ------------AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
A+GL P VATY +++ C G I A EM EK + + C+
Sbjct: 592 LNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSK 651
Query: 375 LINAY-------------SKIGDL-------------------------KSALKFKNKML 396
+ N+ KI D K A +N
Sbjct: 652 IANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTP 711
Query: 397 ESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG-FTPSYCSYSWIVDGYCKKDNV 455
+ L P+ Y I G CK +LE A++L +L + F P +Y+ ++ G ++
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+ L DE KG+ + Y ALI+ LCK+ ++ A++L + + GI+ +++ Y +L
Sbjct: 772 NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTL 831
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLI 541
KSG + A + E+M ++ L+
Sbjct: 832 IDGLVKSGNVAEAMRLKEKMIEKGLV 857
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 209/415 (50%), Gaps = 2/415 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E ++ S LV + +A+ + ++M + +P L + L++ L G +
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ R+V+ G + Y +++ KS + A L +MEE+ + + Y+ +I C
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
K G +ALS+ ++ME +GI D+V+Y+SLI G C +G+ + +M E+ ++ P+ V
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
T++ LID + K +L +A ++ M +G+ P TYNS++ C++ + +AN++ + M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
K + D +T + LIN+Y K + ++ ++ GL P+ TY L+ GFC+ +L
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+AKEL M+ G PS +Y ++DG C ++ L + ++ + L +Y +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
I +C +++ A LF + G+ D V Y + K G S A + +M
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 203/400 (50%), Gaps = 3/400 (0%)
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
K R+++ AL + ++M Y +P +L+ L K G + + + +++ + + ++
Sbjct: 188 KGRVSE-ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
Y+ +I + K + A L NEME KG+ D+ TY++LI C G + + +M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANEL 315
I D+V++++LI F KEG++ EA +++E+ + P+ +TY +LIDG+CK N L
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
+A ++ +LM +KG P + TY+ ++ C+ R+ D +L E+S K + + IT NTL
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
+ + + G L +A + +M+ G+ P TY L+ G C EL A E+ M +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEK 495
T Y+ I+ G C VD +L KG+ D Y +I LCK + A+
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 496 LFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
LF M+ +G + D Y L A+ + ++EEM
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 178/352 (50%), Gaps = 2/352 (0%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
++ L++ V A L++ M E PD+ T +TLI+ C KG EAL + D+M
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMV 202
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELD 316
G D V+Y ++ CK G A +F ++ ++ + V Y+ +ID CK D
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFD 262
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
AL + ME KG+ V TY+S++ LC DG+ D K+L EM + + D +T + LI
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
+ + K G L A + N+M+ G+ PD TY +LI GFCK + L A ++ M+ G
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
P +YS +++ YCK VD + L E SKGL + Y L+ C+ ++ A++L
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 497 FYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
F M G+ V Y L +G+ + A + E+M K R+ + IY+
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 175/344 (50%), Gaps = 2/344 (0%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
DAL +F +M + +K + + L+ L DG + K+ + ++ ++ ++ ++ L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
I K + AK+L NEM +G+ PD TYN+LI +CK+ +EA + D M +G
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALK 320
DIV+Y+ LI +CK R+ + R+F EI K PN +TY TL+ G+C++ +L+ A +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ + M ++G+ P V TY +L LC +G + A ++ +M + ++ N +I+
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
+ A + + G+KPD TY +I G CK L A L M + G TP
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 561
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
+Y+ ++ + + + + L +E G D+S + +I L
Sbjct: 562 TYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ + K +A Q+F+ M +P + ++L++S K + ++ + + G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
++ N YN L+ +S + AK+L EM +GV P + TY L+ C G +AL
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGY 309
I +KM++ + L I YN +I+G C ++ +A +F + D P+ VTY +I G
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
CK L +A + M+ G P TYN ++R + + +L+ EM AD+
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595
Query: 370 ITCNTLINAYS 380
T +I+ S
Sbjct: 596 STIKMVIDMLS 606
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 1/279 (0%)
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P + + L + + D L + ME G+ + T ++ C+ ++ A +
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
L + + D IT +TL+N + G + A+ ++M+E +PD T LI+G C
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
+ A L+ M++ GF P +Y +++ CK N L L + + +
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 477 YRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
Y +I LCK + A LF ME GI D V Y+SL GK + +L EM
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 537 KRRLIITAKIYSCF-SVPDGHGENKVSQMFWDHVVERGL 574
R +I +S V G+ ++ ++ ++ RG+
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 1/239 (0%)
Query: 311 KANELDQAL-KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
KA+ Q L K L+ + +Y LR D ++ DA L M + +
Sbjct: 11 KASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTP 70
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
I N L +A ++ L F M +G++ D +T +I+ +C+ +L A +L
Sbjct: 71 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 130
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
G+ P ++S +V+G+C + V +AL D + D LI LC +
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 490 IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
+ A L M G D V Y + KSG +++A ++ +M +R + + YS
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 208/396 (52%), Gaps = 2/396 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
+A+ + +QM +P L +++ L K G ++ + K++ + + ++ IYN
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I K + ++ A L EM+ KG+ PD+FTY++LIS C G +A + M
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
IN ++V++++LI F KEG++ EA +++ E+ + P+ TY++LI+G+C + LD+A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+ ELM +K +P V TY+++++ C+ R+ + +L EMS++ + + +T TLI+ +
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
+ D +A +M+ G+ P+ TY L+ G CK +L A + + + P
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+Y+ +++G CK V+ L KG+ + Y +I C+ E A+ L
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
M+ +G +S Y +L A + G ++ +++EM
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 215/419 (51%), Gaps = 4/419 (0%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ AK + + + EQM+ + L ++ ++ + ++ + ++++ G
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+I + L++ S+ + A L+++M E G PD FT+ TLI EA+
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGY 309
++ D+M + G D+V+Y +++ G CK G + A + +++ + V Y T+IDG
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
CK +D AL + M+ KG+ P V TY+S++ LC GR DA++LL++M E+K+ +
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
+T + LI+A+ K G L A K ++M++ + PD FTY +LI+GFC D L+ AK +
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
M+ P+ +YS ++ G+CK V+ + L E +GL + Y LI +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 490 IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
+ A+ +F M G+ + + Y L K+GK + A V E + +R + IY+
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL--QRSTMEPDIYT 505
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 207/410 (50%), Gaps = 2/410 (0%)
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
LS L+ Y S+ DA+ + +QM KP T L+ L + + ++
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
VQ G ++ Y +++ K D++ A LL +ME+ + D+ YNT+I CK
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTL 305
+AL++ +M+ +GI D+ +Y+SLI C GR +A+R+ S++ + PN VT++ L
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
ID + K +L +A K+ + M + + P + TY+S++ C R+ +A + M K
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ +T +TLI + K ++ ++ +M + GL + TY LIHGF + + ++A+
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+ M+ G P+ +Y+ ++DG CK + + + + + D Y +I +C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
K ++E +LF ++ G+S + + Y ++ + + G A ++L++M
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 180/356 (50%), Gaps = 2/356 (0%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
+I +N L+ A +K E L +M+ G+ D++TY+ I+ +C++ AL++
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKA 312
KM + G DIV+ +SL+ G+C R+ +A + ++ + P+ T+TTLI G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
N+ +A+ + + M +G P + TY +++ LC+ G I A LL +M + K++AD +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
NT+I+ K + AL +M G++PD FTY +LI C A LL M++
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
P+ ++S ++D + K+ + L DE + + + D Y +LI C ++++
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 381
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
A+ +F M + V Y++L + K+ + + EM++R L+ Y+
Sbjct: 382 AKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 179/356 (50%), Gaps = 2/356 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E + + + ++ K + DAL +F +M ++P + + L+S L G + +
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ +++ + N+ ++ LI A K + A++L +EM ++ + PDIFTY++LI+ +C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
EA + + M + ++V+Y++LI GFCK R+ E +F E+ + N V
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYTTLI G+ +A + D A V + M + G++P + TYN +L LC++G++ A + +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
++ D T N +I K G ++ + + G+ P+ Y +I GFC+
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
E A LL M + G P+ +Y+ ++ + + +A L E S G DAS
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 19/301 (6%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
A+I K A+++ D++ R DP++ + S L+ +
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSI---------------DPDIFT--YSSLINGFCM 375
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
+A +FE M P++ + L+ K ++ + + Q G+V N
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y LIH ++RD + A+ + +M GV P+I TYN L+ CK G +A+ + + ++
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVTYTTLIDGYCKANELD 316
R + DI +YN +I G CK G++ + +F +K +PN + Y T+I G+C+ +
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+A + + M+ G P TYN+++R +DG + +L+ EM D T +
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVT 615
Query: 377 N 377
N
Sbjct: 616 N 616
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 132/262 (50%), Gaps = 2/262 (0%)
Query: 281 RMREATRMFSEIKDATP--NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYN 338
++ +A +F ++ + P + V + L+ K N+ + + + E M+ G+ + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 339 SILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES 398
+ C+ ++ A +L +M + + D +T ++L+N Y + A+ ++M+E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 399 GLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAI 458
G KPD FT+ LIHG ++ A L+ M+ G P +Y +V+G CK+ ++D
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 459 LALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
L+L + + D +Y +I LCK + ++ A LF M+ GI D Y+SL
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 519 YWKSGKTSVASNVLEEMAKRRL 540
G+ S AS +L +M +R++
Sbjct: 303 LCNYGRWSDASRLLSDMIERKI 324
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 3/220 (1%)
Query: 337 YNSILRKLCQDG-RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
Y ILR D ++ DA L +M + + + N L++A +K+ + + +M
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
G+ D +TY I+ FC+ +L A +L M+ G+ P + S +++GYC +
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+AL D+ + G D + LI L + A L M G D V Y ++
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDG 555
K G +A ++L++M K ++ IY+ ++ DG
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN--TIIDG 267
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 207/426 (48%), Gaps = 2/426 (0%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+H P + + L+ A R + + ++M LY + L + T+L+ +
Sbjct: 63 VHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRL 122
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ + ++++ G +I + L+H + A L+ M + G P++ YNTL
Sbjct: 123 SFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL 182
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDA 295
I CK G AL + ++ME++G+ D+V+YN+L+ G C GR +A RM ++ +
Sbjct: 183 IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ VT+T LID + K LD+A ++ + M + P TYNSI+ LC GR+ DA K
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
+ M+ K + +T NTLI+ + K + +K +M G D FTY LIHG+C
Sbjct: 303 TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC 362
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
++ +L A ++ M+ TP ++ ++ G C +++ L D+ +
Sbjct: 363 QVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIV 422
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
Y +I LCK +++E A +LF + G+ D+ YT + K+G A ++ M
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Query: 536 AKRRLI 541
+ +I
Sbjct: 483 KEEGII 488
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 156/330 (47%), Gaps = 2/330 (0%)
Query: 213 ERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSL 272
E A L EM +P I + L++ + + KME GI+ D+ S+ L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 273 IYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGL 330
I+ FC+ R+ A + ++ P+ VT+ +L+ G+C N + A + LM G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 331 YPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK 390
P V YN+++ LC++G + A +LLNEM +K + AD +T NTL+ G A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 391 FKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYC 450
M++ + PD T+ ALI F K L+ A+EL M+ + P+ +Y+ I++G C
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 451 KKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSV 510
+ D SKG + Y LI CK ++ KLF M G + D
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 511 IYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
Y +L + Y + GK VA ++ M RR+
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%)
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
R DA L EM + + L+ A + + ++ + F KM G+ D +++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 409 ALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSK 468
LIH FC+ L A +L M+ G+ PS ++ ++ G+C + + +L +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 469 GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
G + VY LI LCK ++ A +L ME G+ D V Y +L SG+ S A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 529 SNVLEEMAKRRL 540
+ +L +M KR +
Sbjct: 231 ARMLRDMMKRSI 242
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 203/390 (52%), Gaps = 3/390 (0%)
Query: 159 PHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQL 218
P CT++L++L ++G N ++++ G N+ + LI K +++A ++
Sbjct: 250 PDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEM 309
Query: 219 LNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER-EGINLDIVSYNSLIYGFC 277
L EM G P+++T+ LI CK+G +A + K+ R + ++ +Y S+I G+C
Sbjct: 310 LEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYC 369
Query: 278 KEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVA 335
KE ++ A +FS +K+ PN TYTTLI+G+CKA +A ++ LM +G P +
Sbjct: 370 KEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIY 429
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
TYN+ + LC+ R +A +LLN+ ++AD +T LI K D+ AL F +M
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 489
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
++G + D LI FC+ +++ ++ L ++ G P+ +Y+ ++ YCK+ ++
Sbjct: 490 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 549
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
D L G D+ Y +LI LCK ++ A KL+ M G+S V +L
Sbjct: 550 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLIITAK 545
AY Y K ++ A +LE + K+ I T +
Sbjct: 610 AYEYCKRNDSANAMILLEPLDKKLWIRTVR 639
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 204/410 (49%), Gaps = 8/410 (1%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ-D 190
L+ K + A ++ E+M KP++ T L+ L K G T +++ +LV+ D
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA 250
N++ Y +I K + RA+ L + M+E+G+ P++ TY TLI+ +CK G A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDG 308
+ + M EG +I +YN+ I CK+ R EA + ++ + VTYT LI
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQAD 368
CK N+++QAL M G + N ++ C+ +++++ +L + +
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532
Query: 369 NITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLF 428
T ++I+ Y K GD+ ALK+ + M G PD FTY +LI G CK ++ A +L
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592
Query: 429 GMLDAGFTPSYCSYSWIVDGYCKK-DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M+D G +P + + YCK+ D+ +A++ L E L K L + R L+R+LC
Sbjct: 593 AMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILL--EPLDKKLWI--RTVRTLVRKLCSE 648
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
+++ A F + S D V + A +SGK ++ +++ E +++
Sbjct: 649 KKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISR 698
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 190/414 (45%), Gaps = 3/414 (0%)
Query: 127 QVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKR 186
+V+ ++ ++++ +A+ + M+ L P +L ++ G +
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
+ GVV + Y ++ C + ++ A + L M ++G +PD T +++ C+ G+
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTT 304
A+ KM G +++++ SLI G CK+G +++A M E+ PN T+T
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 305 LIDGYCKANELDQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
LIDG CK ++A ++ +L+ + P V TY S++ C++ ++ A L + M E+
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
+ + T TLIN + K G A + N M + G P+ +TY A I CK A
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
ELL G +Y+ ++ CK+++++ LA G D + LI
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
C+ ++++ +E+LF + G+ YTS+ Y K G +A M +
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 158/352 (44%), Gaps = 3/352 (0%)
Query: 200 NCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER 259
NC++ + +E A+ + +EM +GVVPD +Y ++ + G EA M +
Sbjct: 186 NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQ 245
Query: 260 EGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQ 317
G D + ++ C+ G + A F ++ D PN + +T+LIDG CK + Q
Sbjct: 246 RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 305
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI-TCNTLI 376
A ++ E M G P V T+ +++ LC+ G A +L ++ N+ T ++I
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMI 365
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
Y K L A ++M E GL P+ TY LI+G CK A EL+ M D GF
Sbjct: 366 GGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFM 425
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
P+ +Y+ +D CKK L ++ S GL D Y LI+ CK I A
Sbjct: 426 PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAF 485
Query: 497 FYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
F M G D + L A+ + K + + + + LI T + Y+
Sbjct: 486 FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYT 537
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 4/273 (1%)
Query: 120 DDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
D + N + ++ Y K A +F +M+ L P++ T L++ K G+
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHA-CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
+++ + +G + NIY YN I + C KSR E A +LLN+ G+ D TY LI
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE-AYELLNKAFSCGLEADGVTYTILI 470
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--AT 296
CK+ +AL+ +M + G D+ N LI FC++ +M+E+ R+F +
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P TYT++I YCK ++D ALK M+ G P TY S++ LC+ + +A KL
Sbjct: 531 PTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKL 590
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
M ++ + +T TL Y K D +A+
Sbjct: 591 YEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 623
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 3/259 (1%)
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
H ++ + + L++A+ + M+ +GL P T N +L + G I A + +
Sbjct: 147 HEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFD 206
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD 418
EMS + V D+ + ++ + G ++ A ++ M++ G PD T ++ C+
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 266
Query: 419 ELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
+ A M+D GF P+ +++ ++DG CKK ++ + +E + G + +
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNGISGDSV-IYTSLAYAYWKSGKTSVASNVLEEMAK 537
ALI LCK E A +LF + + +V YTS+ Y K K + A + M +
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386
Query: 538 RRLIITAKIYSCFSVPDGH 556
+ L Y+ ++ +GH
Sbjct: 387 QGLFPNVNTYT--TLINGH 403
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 207/401 (51%), Gaps = 2/401 (0%)
Query: 150 EQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKS 209
EQM+ + L ++ ++ + ++ + ++++ G +I + L++ S
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 210 RDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSY 269
+ + A L+++M E G PD FT+ TLI EA+++ D+M + G D+V+Y
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 270 NSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEA 327
+++ G CK G + A + ++++ A N V + T+ID CK ++ A+ + ME
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 328 KGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKS 387
KG+ P V TYNS++ LC GR DA++LL+ M EKK+ + +T N LI+A+ K G L
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 388 ALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVD 447
A K +M++ + PD TY LI+GFC + L+ AK++ M+ P+ +Y+ +++
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 448 GYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISG 507
G+CK V+ + L E +GL + Y +I+ + + A+ +F M N +
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466
Query: 508 DSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
D + Y+ L + GK A + + + K + + IY+
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 207/457 (45%), Gaps = 40/457 (8%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
LS L+ Y S+ DA+ + +QM KP T L+ L + + ++V
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
Q G ++ Y +++ K D++ A LLN+ME + ++ +NT+I CK
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---------------- 292
A+ + +ME +GI ++V+YNSLI C GR +A+R+ S +
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 293 ---------------------KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLY 331
+ P+ +TY LI+G+C N LD+A ++ + M +K
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 332 PGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
P + TYN+++ C+ R+ D +L EMS++ + + +T T+I + + GD SA
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 392 KNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK 451
+M+ + + D TY L+HG C +L++A + + + + Y+ +++G CK
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 452 KDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVI 511
V D F S + D Y +I LC ++ A+ LF M+ +G +S
Sbjct: 516 AGKVGEAW---DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Query: 512 YTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
Y +L A + + ++ +++EM + A S
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 172/409 (42%), Gaps = 72/409 (17%)
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLIS-------------------------------- 239
V+ A L +M + P I +N L+S
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 240 ---LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---- 292
+C++ AL++ KM + G DIV+ +SL+ G+C R+ +A + ++
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 293 ---------------------------------KDATPNHVTYTTLIDGYCKANELDQAL 319
+ P+ VTY T+++G CK ++D AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+ MEA + V +N+I+ LC+ + A L EM K ++ + +T N+LIN
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
G A + + MLE + P+ T+ ALI F K +L A++L M+ P
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+Y+ +++G+C + +D + +SK + Y LI CK +++E +LF
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
M G+ G++V YT++ ++++G A V ++M R+ YS
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 167/355 (47%), Gaps = 5/355 (1%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
+ N + + ++ K R + A+ +F +M ++P++ L++ L G + +
Sbjct: 255 KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR 314
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ +++ + N+ +N LI A K + A++L EM ++ + PD TYN LI+ +C
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
EA + M + +I +YN+LI GFCK R+ + +F E+ + N V
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYTT+I G+ +A + D A V + M + + + TY+ +L LC G++ A + +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ +++ + NT+I K G + A +KPD TY +I G C L
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDL---FCSLSIKPDVVTYNTMISGLCSKRLL 551
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
+ A +L M + G P+ +Y+ ++ + + A L E S G DAS
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAS 606
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 151/306 (49%), Gaps = 5/306 (1%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
DA ++ M ++ P++ L+ + K+G K+H+ ++Q + + YN LI
Sbjct: 311 DASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
+ ++ AKQ+ M K +P+I TYNTLI+ +CK + + + +M + G+
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSE-IKDATPNHV-TYTTLIDGYCKANELDQALKV 321
+ V+Y ++I GF + G A +F + + + P + TY+ L+ G C +LD AL +
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+ ++ + + YN+++ +C+ G++ +A L +S ++ D +T NT+I+
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCS 547
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
L+ A KM E G P+ TY LI + + ++ EL+ M +GF +
Sbjct: 548 KRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Query: 442 YSWIVD 447
S + +
Sbjct: 608 ISLVTN 613
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 142/290 (48%), Gaps = 7/290 (2%)
Query: 121 DPEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
+ ++N V+++ L+ + K +A ++ E+M + P +L++ +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
++ K +V + NI YN LI+ K + VE +L EM ++G+V + TY T+I
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP- 297
+ + G A + +M + DI++Y+ L++G C G++ A +F ++ +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 298 -NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
N Y T+I+G CKA ++ +A +L + + P V TYN+++ LC +++A+ L
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAW---DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFT 406
+M E ++ T NTLI A + D ++ + +M SG D T
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 41/269 (15%)
Query: 313 NELDQALKVRELMEAKG------LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
N L +KV + ++ G +P + +N +L + + + L +M +
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
D T + IN + + L AL KM++ G +PD T +L++G+C + A L
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 427 LFGMLDAGF-----------------------------------TPSYCSYSWIVDGYCK 451
+ M++ G+ P +Y +V+G CK
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 452 KDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVI 511
+ ++D L L ++ + + + ++ +I LCK +E A LF ME GI + V
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 512 YTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
Y SL G+ S AS +L M ++++
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 1/213 (0%)
Query: 337 YNSILRKLCQDG-RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
Y ILR D ++ DA L +M + + + N L++A +K+ + + +M
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
G+ D +TY I+ FC+ +L A +L M+ G+ P + S +++GYC +
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+AL D+ + G D + LI L + A L M G D V Y ++
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
K G +A N+L +M R+ I++
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 200/431 (46%), Gaps = 2/431 (0%)
Query: 119 HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
HD + + + L+ K + DA Q+F++M +L P L L+ K G
Sbjct: 207 HDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPE 266
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
+K+ +R+ D + ++ +N L+ K+ VE A+ +L EM++ G VPD FT++ L
Sbjct: 267 KSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILF 326
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDAT 296
Y AL + + G+ ++ + + L+ CKEG++ +A + K
Sbjct: 327 DGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
PN V Y T+IDGYC+ +L A E ME +G+ P YN ++R+ C+ G + +A K
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
+N+M K V T N LI Y + + +M ++G P+ +Y LI+ CK
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
+L A+ + M D G +P Y+ ++DG C K ++ E L KG+ L+
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 477 YRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
Y LI L ++ AE L + G+ D Y SL Y +G + EEM
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 537 KRRLIITAKIY 547
+ + T K Y
Sbjct: 627 RSGIKPTLKTY 637
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 202/413 (48%), Gaps = 6/413 (1%)
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
K+ M +DA V ++M+ P ++L + +++ V GV +N Y
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
+ L++A K +E+A+++L KG+VP+ YNT+I YC+KG A + M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTYTTLIDGYCKANEL 315
E++G+ D ++YN LI FC+ G M A + ++ +K +P+ TY LI GY + E
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
D+ + + ME G P V +Y +++ LC+ ++ +A + +M ++ V N L
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
I+ G ++ A +F +ML+ G++ + TY LI G +L A++LL + G
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEK 495
P +Y+ ++ GY NV +AL +E G+ Y LI LC E IE E+
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTER 654
Query: 496 LFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
LF M + D ++Y + + Y G A N+ ++M ++ + + Y+
Sbjct: 655 LFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 208/426 (48%), Gaps = 2/426 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
+S L+ L+ H K++ + + VF + +P + + +K ++
Sbjct: 143 SSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELF 202
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
R+ D + +++IYN LI K + + A+QL +EM + ++P + TYNTLI YCK
Sbjct: 203 NRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKA 262
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTY 302
G ++ ++++M+ + I ++++N+L+ G K G + +A + E+KD P+ T+
Sbjct: 263 GNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF 322
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+ L DGY + + AL V E G+ T + +L LC++G+I A ++L
Sbjct: 323 SILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMA 382
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
K + + + NT+I+ Y + GDL A M + G+KPD Y LI FC++ E+E+
Sbjct: 383 KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
A++ + M G +PS +Y+ ++ GY +K D + E G + Y LI
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 483 RLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLII 542
LCK ++ A+ + ME G+S IY L GK A +EM K+ + +
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 543 TAKIYS 548
Y+
Sbjct: 563 NLVTYN 568
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 183/376 (48%), Gaps = 7/376 (1%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
++A + +M+L + P + +L+ + + + I K + +G + N+ Y L
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
I+ K + A+ + +ME++GV P + YN LI C KG +A +M ++GI
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALK 320
L++V+YN+LI G G++ EA + EI K P+ TY +LI GY A + + +
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ E M+ G+ P + TY+ +L LC I +L EMS ++ D + N +++ Y+
Sbjct: 621 LYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYA 676
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
GD++ A + +M+E + D TY +LI G K+ +L + L+ M P
Sbjct: 677 VHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEAD 736
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM 500
+Y+ IV G+C+ + + E KG LD + L+ L + + + AE + M
Sbjct: 737 TYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Query: 501 EGNGISGDSVIYTSLA 516
G + GD + L+
Sbjct: 797 NGRML-GDVTVDEDLS 811
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 207/481 (43%), Gaps = 68/481 (14%)
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
S L Y+ + + AL V+E +K + C++LL++L K+G +I R
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
+ G+V N IYN +I + D+ A+ + ME++G+ PD YN LI +C+ G
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTL 305
A +KM+ +G++ + +YN LI G+ ++ + + E++D PN V+Y TL
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK---------- 355
I+ CK ++L +A V+ ME +G+ P V YN ++ C G+I DA +
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 356 -------------------------LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK 390
LL E+S K ++ D T N+LI+ Y G+++ +
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 391 FKNKMLESG-------------------------------LKPDPFTYKALIHGFCKMDE 419
+M SG LKPD Y ++H + +
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGD 680
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
+E A L M++ +Y+ ++ G K + + +L DE ++ + +A Y
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
+++ C+++ A + M+ G D I L + ++ A V+ EM R
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRM 800
Query: 540 L 540
L
Sbjct: 801 L 801
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 150/321 (46%), Gaps = 2/321 (0%)
Query: 232 FTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE 291
F+Y L L + M EA + + EGI S L+ K + R +F
Sbjct: 110 FSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 292 I--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGR 349
I D P+ Y I K +++ + L++ M+ +YP V YN ++ LC+ R
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 350 IRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
+ DA +L +EM +++ IT NTLI+ Y K G+ + + K + +M ++P T+
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKG 469
L+ G K +E A+ +L M D GF P ++S + DGY + +A L + + + G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 470 LCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVAS 529
+ ++A L+ LCK +IE AE++ G+ + VIY ++ Y + G A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 530 NVLEEMAKRRLIITAKIYSCF 550
+E M K+ + Y+C
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCL 430
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 111/228 (48%), Gaps = 8/228 (3%)
Query: 157 LKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAK 216
LKP + L+S G +++ + + G+ + Y+ LI C+K +E +
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK-EGIELTE 653
Query: 217 QLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGF 276
+L EM K PD+ YN ++ Y G +A ++Q +M + I LD +YNSLI G
Sbjct: 654 RLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Query: 277 CKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGV 334
K G++ E + E+ ++ P TY ++ G+C+ + A M+ KG V
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770
Query: 335 ATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
N ++ L ++ R ++A +++EM+ + + ++T + ++A K+
Sbjct: 771 CIGNELVSGLKEEWRSKEAEIVISEMNGRML--GDVTVDEDLSATEKL 816
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 135 HYAKSRMTQDALQVFEQMRLY---QLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
H S T++ +++ E RL+ LKP L +L G + + K++++
Sbjct: 638 HLLISLCTKEGIELTE--RLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS 695
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ L+ YN LI K + + L++EM + + P+ TYN ++ +C+ + A
Sbjct: 696 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAY 755
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVT 301
+M+ +G LD+ N L+ G +E R +EA + SE+ VT
Sbjct: 756 VWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVT 805
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 180/338 (53%), Gaps = 2/338 (0%)
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
L+ A SK + + L +M+ G+ ++ T N L++ +C+ ALS KM + G
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQAL 319
IV++ SL+ GFC+ R+ +A MF ++ PN V Y T+IDG CK+ ++D AL
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+ ME G+ P V TYNS++ LC GR DA ++++ M+++++ D T N LI+A
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
K G + A +F +M+ L PD TY LI+G C L+ A+E+ M+ G P
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDV 326
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+YS +++GYCK V+ + L E +G+ + Y LI+ C+ ++ AE++F
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
M G+ + + Y L + +GK A +L +M K
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 200/409 (48%), Gaps = 2/409 (0%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
S L+ +K + + ++EQM++ + +L C +LL+ + ++ +++
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ G +I + L++ + V A + ++M G P++ YNT+I CK
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLI 306
AL + ++ME++GI D+V+YNSLI G C GR +ATRM S + ++ P+ T+ LI
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
D K + +A + E M + L P + TY+ ++ LC R+ +A ++ M K
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
D +T + LIN Y K ++ +K +M + G+ + TY LI G+C+ +L A+E+
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
M+ G P+ +Y+ ++ G C ++ L + + G+ D Y +IR +CK
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 487 IEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
++ A ++ + G+ D YT++ +K G A + +M
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 157/346 (45%), Gaps = 37/346 (10%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ + + DAL +F+QM KP++ ++ L K + + R+ +DG
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ ++ YN LI S A ++++ M ++ + PD+FT+N LI K+G EA
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI------------------- 292
++M R ++ DIV+Y+ LIYG C R+ EA MF +
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 293 ------------------KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGV 334
+ N VTYT LI GYC+A +L+ A ++ M G++P +
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 335 ATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNK 394
TYN +L LC +G+I A +L +M + + AD +T N +I K G++ A
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 395 MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
+ GL PD +TY ++ G K A L M + G P+ C
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 114/251 (45%)
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
N T L++ +C+ ++L AL M G P + T+ S+L C+ R+ DA +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 358 NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
++M + + + NT+I+ K + +AL N+M + G+ PD TY +LI G C
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 418 DELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVY 477
A ++ M P +++ ++D K+ V +E + + L D Y
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 478 RALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
LI LC +++ AE++F M G D V Y+ L Y KS K + EM++
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 538 RRLIITAKIYS 548
R ++ Y+
Sbjct: 355 RGVVRNTVTYT 365
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%)
Query: 289 FSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
F + A N Y ++ + +LD +L + M P +A ++ +L + +
Sbjct: 36 FCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMK 95
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
+ L +M + + TCN L+N + + L AL F KM++ G +P T+
Sbjct: 96 KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFG 155
Query: 409 ALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSK 468
+L++GFC+ D + A + M+ G+ P+ Y+ I+DG CK VD L L +
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 469 GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
G+ D Y +LI LC + A ++ M I D + +L A K G+ S A
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 529 SNVLEEMAKRRL 540
EEM +R L
Sbjct: 276 EEFYEEMIRRSL 287
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 89/165 (53%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S L+ Y KS+ + +++F +M + + T+L+ + G NV +I +R+V
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
GV NI YN L+H + +E+A +L +M++ G+ DI TYN +I CK G +
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD 294
A I + +G+ DI +Y +++ G K+G REA +F ++K+
Sbjct: 450 AWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 219/443 (49%), Gaps = 37/443 (8%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
DA+ +F M + P + LLS++ K ++V + +++ + G+ N+Y YN L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG--------------MHY 248
I+ + + A LL +M + G P I T ++L++ YC M Y
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 249 ---------------------EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATR 287
EA+++ D+M + G ++V+Y ++ G CK G + A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 288 MFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
+ ++++ A N V Y+T+ID CK D AL + ME KG+ P V TY+S++ LC
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
R DA++LL++M E+K+ + +T N LI+A+ K G L A K ++M++ + PD F
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
TY +LI+GFC D L+ AK + M+ P+ +Y+ +++G+CK +D + L E
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKT 525
+GL + Y LI + + A+ +F M +G+ + + Y +L K+GK
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 526 SVASNVLEEMAKRRLIITAKIYS 548
A V E + + ++ T Y+
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYN 509
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 196/370 (52%), Gaps = 2/370 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
+A+ + ++M +P+L V+++ L K G ++ + + ++ + N+ IY+
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I + K R + A L EME KGV P++ TY++LIS C +A + M
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
IN ++V++N+LI F KEG++ EA +++ E+ + P+ TY++LI+G+C + LD+A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+ ELM +K +P V TYN+++ C+ RI + +L EMS++ + + +T TLI+ +
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
+ D +A +M+ G+ P+ TY L+ G CK +LE A + + + P+
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+Y+ +++G CK V+ L KG+ D +Y +I C+ E A+ LF
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 500 MEGNGISGDS 509
M +G DS
Sbjct: 566 MREDGPLPDS 575
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 200/410 (48%), Gaps = 2/410 (0%)
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
LS L+ Y + DA+ + +QM +P T L+ L + + R+
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
VQ G N+ Y +++ K D++ A LLN+ME + ++ Y+T+I CK
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTL 305
+AL++ +ME +G+ ++++Y+SLI C R +A+R+ S++ + PN VT+ L
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
ID + K +L +A K+ + M + + P + TY+S++ C R+ +A + M K
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ +T NTLIN + K + ++ +M + GL + TY LIHGF + + ++A+
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+ M+ G P+ +Y+ ++DG CK ++ + + + + Y +I +C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
K ++E LF + G+ D +IY ++ + + G A + +M
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 162/317 (51%), Gaps = 2/317 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E N + S ++ K R DAL +F +M ++P++ + L+S L + +
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ +++ + N+ +N LI A K + A++L +EM ++ + PDIFTY++LI+ +C
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
EA + + M + ++V+YN+LI GFCK R+ E +F E+ + N V
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYTTLI G+ +A + D A V + M + G++P + TYN++L LC++G++ A + +
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
K++ T N +I K G ++ + G+KPD Y +I GFC+
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 421 ESAKELLFGMLDAGFTP 437
E A L M + G P
Sbjct: 557 EEADALFRKMREDGPLP 573
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%)
Query: 327 AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLK 386
+ G Y ILR ++ DA L M + + N L++A +K+
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 387 SALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
+ KM G+ + +TY LI+ FC+ ++ A LL M+ G+ PS + S ++
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 447 DGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGIS 506
+GYC + +AL D+ + G D + LI L + A L M G
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 507 GDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
+ V Y + K G +A N+L +M ++ IYS
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 4/241 (1%)
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
+LD A+ + M P + +N +L + + + L +M + + T N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
LIN + + + AL KM++ G +P T +L++G+C + A L+ M++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
G+ P +++ ++ G + +AL D + +G + Y ++ LCK I+ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR----RLIITAKIYSC 549
L ME I + VIY+++ + K A N+ EM + +I + + SC
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 550 F 550
Sbjct: 305 L 305
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 244/521 (46%), Gaps = 60/521 (11%)
Query: 58 FPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXR 117
F +F+ P+ LQ +I++ K K F+ A+ LD + F
Sbjct: 137 FAYFETAGVAPN----LQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK----------- 181
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
P+V S S ++ AK+ DAL++F++M + P + +L+ LK+
Sbjct: 182 ----PDVFS--YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 178 NVVWKIHKRLVQDGVVL------------------------------------NIYIYNC 201
++ RL++D V ++Y Y+
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
LIH + +V++A+ + NE++E+ D+ TYNT++ +C+ G E+L + ME +
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
+++IVSYN LI G + G++ EAT ++ + K + TY I G C +++AL
Sbjct: 356 -SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
V + +E+ G + V Y SI+ LC+ R+ +A+ L+ EMS+ V+ ++ CN LI
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
+ L A F +M ++G +P +Y LI G CK + A + ML+ G+ P
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+YS ++ G C+ +D L L +FL GL D ++ LI LC + +++ A + +
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMAN 594
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
ME + + V Y +L ++K G ++ A+ + M K L
Sbjct: 595 MEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 237/513 (46%), Gaps = 25/513 (4%)
Query: 44 LLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHR 103
+L+L + P +F F P Y HS +++ L++ + ++++ I +
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 104 DFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMR-LYQLKPHLP 162
+ D +V V+ Y K+ M AL VF++MR ++ +P +
Sbjct: 73 ECKC-------------DEDVALSVIK----TYGKNSMPDQALDVFKRMREIFGCEPAIR 115
Query: 163 ACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM 222
+ LL++ ++ V + GV N+ YN LI K ++ E+A+ L+ M
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 223 EEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRM 282
++G PD+F+Y+T+I+ K G +AL + D+M G+ D+ YN LI GF KE
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 283 REATRMFSEIKDAT---PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNS 339
+ A ++ + + + PN T+ +I G K +D LK+ E M+ + TY+S
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
++ LC G + A + NE+ E+K D +T NT++ + + G +K +L+ +++E
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHK 354
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAIL 459
+ +Y LI G + +++ A + M G+ +Y + G C V+ L
Sbjct: 355 NSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 460 ALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAY 519
+ E S G LD Y ++I LCK +++E A L M +G+ +S + +L
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
Query: 520 WKSGKTSVASNVLEEMAK---RRLIITAKIYSC 549
+ + AS L EM K R +++ I C
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILIC 507
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 4/281 (1%)
Query: 166 VLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEK 225
+ + L +G N + + + G L++Y Y +I K + +E A L+ EM +
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 226 GVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREA 285
GV + N LI + EA +M + G +VSYN LI G CK G+ EA
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 286 TRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRK 343
+ E+ + P+ TY+ L+ G C+ ++D AL++ GL V +N ++
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 344 LCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD 403
LC G++ DA ++ M + A+ +T NTL+ + K+GD A M + GL+PD
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638
Query: 404 PFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW 444
+Y ++ G C + A E + G P+ Y+W
Sbjct: 639 IISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTV--YTW 677
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 159/344 (46%), Gaps = 9/344 (2%)
Query: 147 QVFEQMRLYQLKPH-----LPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
++ E + L+++ H + + +L+ LL++G + I + + G + Y
Sbjct: 340 KIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGI 399
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
IH + V +A ++ E+E G D++ Y ++I CKK EA ++ +M + G
Sbjct: 400 FIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHG 459
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
+ L+ N+LI G ++ R+ EA+ E+ P V+Y LI G CKA + +A
Sbjct: 460 VELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEAS 519
Query: 320 K-VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
V+E++E G P + TY+ +L LC+D +I A +L ++ + ++ D + N LI+
Sbjct: 520 AFVKEMLE-NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 379 YSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPS 438
+G L A+ M + TY L+ GF K+ + A + M G P
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638
Query: 439 YCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
SY+ I+ G C V + D+ + G+ + L+R
Sbjct: 639 IISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 117/243 (48%), Gaps = 2/243 (0%)
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
K + ++A + ++M + ++ + C L+ L++D + + ++G +
Sbjct: 441 KKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVV 500
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
YN LI K+ A + EM E G PD+ TY+ L+ C+ AL + +
Sbjct: 501 SYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVTYTTLIDGYCKANEL 315
+ G+ D++ +N LI+G C G++ +A + + E ++ T N VTY TL++G+ K +
Sbjct: 561 LQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDS 620
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
++A + M GL P + +YN+I++ LC + A + ++ + T N L
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNIL 680
Query: 376 INA 378
+ A
Sbjct: 681 VRA 683
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 200/412 (48%), Gaps = 3/412 (0%)
Query: 126 SQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK 185
+Q + L+ Y + + + ++ +M+ + ++ + G + + I K
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
++ G N+ IY LI ++ A ++L EM+E+G+ PDIF YN+LI K
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYT 303
EA S +M G+ + +Y + I G+ + A + E+++ PN V T
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 304 TLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
LI+ YCK ++ +A M +G+ TY ++ L ++ ++ DA ++ EM K
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
+ D + LIN +SK+G+++ A ++M+E GL P+ Y L+ GFC+ E+E A
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
KELL M G P+ +Y I+DGYCK ++ L DE KGL D+ VY L+
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
C++ +E A +F G + + + +L +K GKT + + VL +
Sbjct: 742 CCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 201/406 (49%), Gaps = 2/406 (0%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
AL++ E M L P VL+ L K + + GV L+ + Y+ LI
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
K R+ + AK L++EM G+ + Y+ I + K+G+ +A ++ D M G+
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVR 322
+Y SLI G+C+E +R+ + E+K + + TY T++ G C + +LD A +
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
+ M A G P V Y ++++ Q+ R DA ++L EM E+ + D N+LI SK
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSY 442
+ A F +M+E+GLKP+ FTY A I G+ + E SA + + M + G P+
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 443 SWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEG 502
+ +++ YCKK V + + +G+ DA Y L+ L K ++++ AE++F M G
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 503 NGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
GI+ D Y L + K G AS++ +EM + L IY+
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 202/437 (46%), Gaps = 54/437 (12%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A + ++M +P++ T L+ + L++ ++ K + + G+ +I+ YN LI
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS------------------------- 239
SK++ ++ A+ L EM E G+ P+ FTY IS
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 240 ----------LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF 289
YCKKG EA S M +GI D +Y L+ G K ++ +A +F
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 290 SEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD 347
E+ K P+ +Y LI+G+ K + +A + + M +GL P V YN +L C+
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 348 GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
G I A +LL+EMS K + + +T T+I+ Y K GDL A + ++M GL PD F Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 408 KALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
L+ G C+++++E A + FG G S ++ +++ K + L E L+
Sbjct: 736 TTLVDGCCRLNDVERAITI-FGTNKKGCASSTAPFNALINWVFKFGKTE----LKTEVLN 790
Query: 468 KGLCLDAS----------VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAY 517
+ +D S Y +I LCK +E A++LF+ M+ + + YTSL
Sbjct: 791 R--LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 518 AYWKSGKTSVASNVLEE 534
Y K G+ + V +E
Sbjct: 849 GYDKMGRRAEMFPVFDE 865
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 204/429 (47%), Gaps = 6/429 (1%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLY--QLKPHLPACTVLLSSLLKDGTTNVVW 181
+++ S L+ K R A + +M + +KP++ C + + S K+G
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMS--KEGVMEKAK 367
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+ ++ G++ Y LI + ++V + +LL EM+++ +V +TY T++
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNH 299
C G A +I +M G ++V Y +LI F + R +A R+ E+K+ P+
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
Y +LI G KA +D+A M GL P TY + + + A+K + E
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
M E V + + C LIN Y K G + A M++ G+ D TY L++G K D+
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
++ A+E+ M G P SY +++G+ K N+ ++ DE + +GL + +Y
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
L+ C+ +IE A++L M G+ ++V Y ++ Y KSG + A + +EM +
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 540 LIITAKIYS 548
L+ + +Y+
Sbjct: 728 LVPDSFVYT 736
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 201/421 (47%), Gaps = 45/421 (10%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N+ + Y ++ A + ++MR + P+ CT L++ K G +
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ +V G++ + Y L++ K+ V+ A+++ EM KG+ PD+F+Y LI+ + K
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTY 302
G +A SI D+M EG+ +++ YN L+ GFC+ G + +A + E +K PN VTY
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA--------- 353
T+IDGYCK+ +L +A ++ + M+ KGL P Y +++ C+ + A
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK 760
Query: 354 -----------------------------NKLLNEMSEKKVQADNITCNTLINAYSKIGD 384
N+L++ ++ + +++T N +I+ K G+
Sbjct: 761 GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 385 LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW 444
L++A + ++M + L P TY +L++G+ KM + + AG P + YS
Sbjct: 821 LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSV 880
Query: 445 IVDGYCKKDNVDAILALPDEFLSK-----GLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
I++ + K+ L L D+ +K G L S RAL+ K+ ++E AEK+ +
Sbjct: 881 IINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMEN 940
Query: 500 M 500
M
Sbjct: 941 M 941
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 169/362 (46%), Gaps = 45/362 (12%)
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
K+ DA ++F +MR + P + + VL++ K G I +V++G+ N+
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
IYN L+ +S ++E+AK+LL+EM KG+ P+ TY T+I YCK G EA + D+M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 258 EREGINLDIVSYNSLIYGFC----------------------------------KEGRMR 283
+ +G+ D Y +L+ G C K G+
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 284 EATRMFSEIKDAT------PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATY 337
T + + + D + PN VTY +ID CK L+ A ++ M+ L P V TY
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 338 NSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM-- 395
S+L + GR + + +E ++ D+I + +INA+ K G AL ++M
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 396 ---LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKK 452
++ G K T +AL+ GF K+ E+E A++++ M+ + P + +++ C
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCIS 963
Query: 453 DN 454
N
Sbjct: 964 SN 965
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 126/569 (22%), Positives = 224/569 (39%), Gaps = 96/569 (16%)
Query: 14 VCAIIVKGHWGNLLKVNNAPV-LSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTH 72
+ I+ + +W + L +N + ++ + VL ++ PS FF WV+S
Sbjct: 38 IAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDD--PSKLLSFFNWVDSQKVTEQ 95
Query: 73 SLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHD--DPEVNSQVLS 130
L + L + F+ A +++++ R++ + + +
Sbjct: 96 KLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFG 155
Query: 131 WLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQD 190
L Y ++A+ VF +L P L C VLL +LL+ ++ W ++K +V
Sbjct: 156 ILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV-- 213
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA 250
E+ VV D+ TY+ LI +C+ G
Sbjct: 214 ---------------------------------ERNVVFDVKTYHMLIIAHCRAGNVQLG 240
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYC 310
+ K E+E + AT N
Sbjct: 241 KDVLFKTEKE-------------------------------FRTATLN------------ 257
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
+D ALK++E M KGL P TY+ ++ LC+ R+ DA LL EM V DN
Sbjct: 258 ----VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNH 313
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
T + LI+ K + +A ++M+ G+ P+ Y I K +E AK L GM
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
+ +G P +Y+ +++GYC++ NV L E + + + Y +++ +C +
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 491 ECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
+ A + M +G + VIYT+L + ++ + A VL+EM ++ + Y+
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 551 SVPDGHGENKVSQM-----FWDHVVERGL 574
+ G +K +M F +VE GL
Sbjct: 494 II----GLSKAKRMDEARSFLVEMVENGL 518
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 212/432 (49%), Gaps = 39/432 (9%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
DA+ +F M + P + + LLS++ K ++V +++ G+ N+Y YN LI
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 204 HA------------------------------------CSKSRDVERAKQLLNEMEEKGV 227
+ C +R + A L+++M E G
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR-ISDAVALVDQMVEMGY 179
Query: 228 VPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATR 287
PD T+ TLI EA+++ D+M + G D+V+Y +++ G CK G A
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 288 MFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
+ ++++ A N V Y+T+ID CK D AL + ME KG+ P V TY+S++ LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
GR DA++LL++M E+K+ + +T + LI+A+ K G L A K +M++ + P+ F
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
TY +LI+GFC +D L AK++L M+ P+ +Y+ +++G+CK VD + L E
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKT 525
+GL + Y LI + + A+ +F M G+ + + Y L K+GK
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 526 SVASNVLEEMAK 537
+ A V E + +
Sbjct: 480 AKAMVVFEYLQR 491
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 186/368 (50%), Gaps = 4/368 (1%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
+P++ + L+ L+ + DA+ + +QM KP T L+ L +
Sbjct: 145 EPDIVT--LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
+ R+VQ G ++ Y +++ K D + A LLN+ME + ++ Y+T+I
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPN 298
CK +AL++ +ME +G+ ++++Y+SLI C GR +A+R+ S++ + PN
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
VT++ LID + K +L +A K+ E M + + P + TY+S++ C R+ +A ++L
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD 418
M K + +T NTLIN + K + ++ +M + GL + TY LIHGF +
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 419 ELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
+ ++A+ + M+ G P+ +Y+ ++DG CK + + + + + D Y
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502
Query: 479 ALIRRLCK 486
+I +CK
Sbjct: 503 IMIEGMCK 510
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 142/266 (53%), Gaps = 2/266 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E N + S ++ K R DAL +F +M ++P++ + L+S L G + +
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ +++ + N+ ++ LI A K + +A++L EM ++ + P+IFTY++LI+ +C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
EA + + M R+ ++V+YN+LI GFCK R+ + +F E+ + N V
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYTTLI G+ +A + D A V + M + G++P + TYN +L LC++G++ A + +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 361 SEKKVQADNITCNTLINAYSKIGDLK 386
++ D T N +I K G K
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 176/406 (43%), Gaps = 46/406 (11%)
Query: 211 DVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYN 270
+++ A L M + P I ++ L+S K +S +KME GI+ ++ +YN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 271 SLI-----------------------------------YGFCKEGRMREATRMFSEIKDA 295
LI GFC R+ +A + ++ +
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 296 --TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
P+ VT+TTLI G N+ +A+ + + M +G P + TY +++ LC+ G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 354 NKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHG 413
LLN+M K++A+ + +T+I++ K AL +M G++P+ TY +LI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 414 FCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLD 473
C A LL M++ P+ ++S ++D + KK + L +E + + + +
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 474 ASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLE 533
Y +LI C ++++ A+++ M + V Y +L + K+ + +
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 534 EMAKRRLI-----ITAKIYSCFSVPDGHGENKVSQMFWDHVVERGL 574
EM++R L+ T I+ F D +QM + +V G+
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDN----AQMVFKQMVSVGV 459
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 4/261 (1%)
Query: 288 MFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD 347
M ++I + V + ++ G L + R K Y Y +LR D
Sbjct: 1 MLAKISSSAKRFVHRSLVVRGNAATFPLSFSFCRRRAFSGKTSYD----YREVLRTGLSD 56
Query: 348 GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
+ DA L M++ + I + L++A +K+ + F KM G+ + +TY
Sbjct: 57 IELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTY 116
Query: 408 KALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
LI+ FC+ L A LL M+ G+ P + + +++G+C + + +AL D+ +
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176
Query: 468 KGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSV 527
G D + LI L + A L M G D V Y ++ K G T +
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 528 ASNVLEEMAKRRLIITAKIYS 548
A N+L +M ++ IYS
Sbjct: 237 ALNLLNKMEAAKIEANVVIYS 257
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
I D N + L+ + K++ +++F +M L + T L+ +
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ + K++V GV NI YN L+ K+ + +A + ++ + PDI+TYN +
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 238 ISLYCKKG 245
I CK G
Sbjct: 505 IEGMCKAG 512
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 220/425 (51%), Gaps = 8/425 (1%)
Query: 10 FIDGVCAIIVKGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPH 69
F++ + +++ W L K+++ L S + VLL++ + +S FF W ++
Sbjct: 56 FVNVAHSHLIQSDWDKLNKLSDH--LDSFRVKNVLLKIQKDYL---LSLEFFNWAKTRNP 110
Query: 70 YTHSLQCSWAMIQILAKYKHFKTAQQML-DKIAHRDFXXXXXXXXXXXRIHDDPEVNSQV 128
+HSL+ ++ L K + FK+A+ +L D + + + + + +V
Sbjct: 111 GSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV 170
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
L +A + ++A F QM+ Y P + +C +SSLL G ++ + ++ +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ + N Y N ++ +S +++ +LL +ME G +YNTLI+ +C+KG+
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLI 306
AL +++ M + G+ ++V++N+LI+GFC+ +++EA+++F E+K + PN VTY TLI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
+GY + + + A + E M G+ + TYN+++ LC+ + R A + + E+ ++ +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
++ T + LI + + M+ SG P+ T+ L+ FC+ ++ + A ++
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 427 LFGML 431
L M+
Sbjct: 471 LREMV 475
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 165/346 (47%), Gaps = 2/346 (0%)
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
+++ L + + A +M++ G +P + + N +S +G AL +M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANEL 315
R I+ + + N ++ G+C+ G++ + + +++ V+Y TLI G+C+ L
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
ALK++ +M GL P V T+N+++ C+ ++++A+K+ EM V + +T NTL
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
IN YS+ GD + A +F M+ +G++ D TY ALI G CK + A + + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEK 495
P+ ++S ++ G C + N D L + G + + L+ C+ E + A +
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 496 LFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
+ M I DS + GK + +L+EM ++ +
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 16/298 (5%)
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKA 312
++D + G++L +++L+Y + RE D+TP + +L +
Sbjct: 138 LRDVLVNGGVDLPAKVFDALLYSY------REC--------DSTPR--VFDSLFKTFAHL 181
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
+ A M+ G P V + N+ + L GR+ A + EM K+ + T
Sbjct: 182 KKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTL 241
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
N +++ Y + G L ++ M G + +Y LI G C+ L SA +L M
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGK 301
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
+G P+ +++ ++ G+C+ + + E + + + Y LI + E
Sbjct: 302 SGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEM 361
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
A + + M NGI D + Y +L + K KT A+ ++E+ K L+ + +S
Sbjct: 362 AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 220/425 (51%), Gaps = 8/425 (1%)
Query: 10 FIDGVCAIIVKGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPH 69
F++ + +++ W L K+++ L S + VLL++ + +S FF W ++
Sbjct: 56 FVNVAHSHLIQSDWDKLNKLSDH--LDSFRVKNVLLKIQKDYL---LSLEFFNWAKTRNP 110
Query: 70 YTHSLQCSWAMIQILAKYKHFKTAQQML-DKIAHRDFXXXXXXXXXXXRIHDDPEVNSQV 128
+HSL+ ++ L K + FK+A+ +L D + + + + + +V
Sbjct: 111 GSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV 170
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
L +A + ++A F QM+ Y P + +C +SSLL G ++ + ++ +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ + N Y N ++ +S +++ +LL +ME G +YNTLI+ +C+KG+
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLI 306
AL +++ M + G+ ++V++N+LI+GFC+ +++EA+++F E+K + PN VTY TLI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
+GY + + + A + E M G+ + TYN+++ LC+ + R A + + E+ ++ +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
++ T + LI + + M+ SG P+ T+ L+ FC+ ++ + A ++
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 427 LFGML 431
L M+
Sbjct: 471 LREMV 475
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 165/346 (47%), Gaps = 2/346 (0%)
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
+++ L + + A +M++ G +P + + N +S +G AL +M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANEL 315
R I+ + + N ++ G+C+ G++ + + +++ V+Y TLI G+C+ L
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
ALK++ +M GL P V T+N+++ C+ ++++A+K+ EM V + +T NTL
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
IN YS+ GD + A +F M+ +G++ D TY ALI G CK + A + + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEK 495
P+ ++S ++ G C + N D L + G + + L+ C+ E + A +
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 496 LFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
+ M I DS + GK + +L+EM ++ +
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 16/298 (5%)
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKA 312
++D + G++L +++L+Y + RE D+TP + +L +
Sbjct: 138 LRDVLVNGGVDLPAKVFDALLYSY------REC--------DSTPR--VFDSLFKTFAHL 181
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
+ A M+ G P V + N+ + L GR+ A + EM K+ + T
Sbjct: 182 KKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTL 241
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
N +++ Y + G L ++ M G + +Y LI G C+ L SA +L M
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGK 301
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
+G P+ +++ ++ G+C+ + + E + + + Y LI + E
Sbjct: 302 SGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEM 361
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
A + + M NGI D + Y +L + K KT A+ ++E+ K L+ + +S
Sbjct: 362 AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 214/430 (49%), Gaps = 20/430 (4%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
+VN ++S ++ Y K M +AL+ F++ R + V +L K G ++
Sbjct: 350 KVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFE 409
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ + + G+V ++ Y LI V A L++EM G+ PD+ TYN L+S
Sbjct: 410 LLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLA 469
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTY 302
+ G E L I ++M+ EG + V+ + +I G C +++EA FS ++ P +
Sbjct: 470 RNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPEN--K 527
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYP-GVATYNSILRKLCQDGRIRDANKLLNEMS 361
+ + GYC+A +A K +E YP + Y + LC +G + A+ +L +MS
Sbjct: 528 ASFVKGYCEAGLSKKAYKAFVRLE----YPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMS 583
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
+V+ C +I A+ K+ +++ A + M+E GL PD FTY +IH +C+++EL+
Sbjct: 584 AYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQ 643
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD-------NVDAILA------LPDEFLSK 468
A+ L M G P +Y+ ++D Y K D +V + + EF +
Sbjct: 644 KAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAA 703
Query: 469 GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
G+ LD Y LI R CK+ +E A +LF M +G+ D V YT+L +Y++ G +A
Sbjct: 704 GIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMA 763
Query: 529 SNVLEEMAKR 538
++ E++K+
Sbjct: 764 VTLVTELSKK 773
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 210/487 (43%), Gaps = 48/487 (9%)
Query: 127 QVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKR 186
+V LV Y M +A V Q + + AC L++ + + G ++ + K+
Sbjct: 147 RVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQ 206
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
L Q G+ N Y Y ++ A + ++E A LL E E +F Y T I+ C G
Sbjct: 207 LKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENE------SVFGYKTFINGLCVTGE 260
Query: 247 HYEA----LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTY 302
+A L + D+ G +L V ++ GFC E +M+ A + E+++ Y
Sbjct: 261 TEKAVALILELIDRKYLAGDDLRAV-LGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVY 319
Query: 303 TTL--IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
L ID YCK L +AL + M KGL + IL+ C+ +A + E
Sbjct: 320 ACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEF 379
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ + D + N +A SK+G ++ A + +M + G+ PD Y LI G+C ++
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
A +L+ M+ G +P +Y+ +V G + + + +L + + ++G +A +
Sbjct: 440 VDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVI 499
Query: 481 IRRLCKIEQIECAEKLFYHMEGN---------------GISGDSV-------------IY 512
I LC +++ AE F +E G+S + +Y
Sbjct: 500 IEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVY 559
Query: 513 TSLAYAYWKSGKTSVASNVLEEMAKRRL----IITAKIYSCFSVPDGHGENKVSQMFWDH 568
L ++ G A +VL++M+ R+ + K+ F + E +Q+ +D
Sbjct: 560 IKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVRE---AQVLFDT 616
Query: 569 VVERGLM 575
+VERGL+
Sbjct: 617 MVERGLI 623
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 218/437 (49%), Gaps = 4/437 (0%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+ D +N LS L+ Y + R T A V M ++ +LL L ++
Sbjct: 99 LETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLEC 158
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ + + ++ ++ +++ YN +I + +++E+A +L NEM+ G + T+ L
Sbjct: 159 GKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGIL 218
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDA 295
I +CK G EA+ +M+ G+ D+V Y SLI GFC G + +F E+ +
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
+P +TY TLI G+CK +L +A ++ E M +G+ P V TY ++ LC G+ ++A +
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
LLN M EK + + +T N +IN K G + A++ M + +PD TY L+ G C
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 416 KMDELESAKELLFGML-DAGFT-PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLD 473
+L+ A +LL+ ML D+ +T P SY+ ++ G CK++ + L + D + K D
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 474 ASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLE 533
L+ K + A +L+ + + I +S YT++ + K+G +VA +L
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 534 EMAKRRLIITAKIYSCF 550
+M L + Y+C
Sbjct: 519 KMRVSELQPSVFDYNCL 535
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 196/415 (47%), Gaps = 6/415 (1%)
Query: 127 QVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
+++W L+ + K+ +A+ ++M+ L+ L T L+ G + +
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+++ G YN LI K ++ A ++ M E+GV P+++TY LI C
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTY 302
G EAL + + M + + V+YN +I CK+G + +A + +K P+++TY
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLY--PGVATYNSILRKLCQDGRIRDANKLLNEM 360
L+ G C +LD+A K+ LM Y P V +YN+++ LC++ R+ A + + +
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
EK D +T N L+N+ K GD+ A++ ++ +S + + TY A+I GFCK L
Sbjct: 451 VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGML 510
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
AK LL M + PS Y+ ++ CK+ ++D L +E D + +
Sbjct: 511 NVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIM 570
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
I K I+ AE L M G+S D Y+ L + K G A + ++M
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 184/386 (47%), Gaps = 4/386 (1%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
L+ K G +I + +++ GV N+Y Y LI + A QLLN M E
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
K P+ TYN +I+ CK G+ +A+ I + M++ D ++YN L+ G C +G + E
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 285 ATRM-FSEIKDAT---PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSI 340
A+++ + +KD++ P+ ++Y LI G CK N L QAL + +L+ K T N +
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 341 LRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGL 400
L + G + A +L ++S+ K+ ++ T +I+ + K G L A KM S L
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Query: 401 KPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILA 460
+P F Y L+ CK L+ A L M P S++ ++DG K ++ + +
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 461 LPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYW 520
L GL D Y LI R K+ ++ A F M +G D+ I S+
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
Query: 521 KSGKTSVASNVLEEMAKRRLIITAKI 546
G+T + +++++ + +++ ++
Sbjct: 646 SQGETDKLTELVKKLVDKDIVLDKEL 671
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 178/397 (44%), Gaps = 47/397 (11%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ + K ++A ++FE M ++P++ T L+ L G T ++ +++
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
N YN +I+ K V A +++ M+++ PD TYN L+ C KG EA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 252 SIQDKMEREG--INLDIVSYNSLIYGFCKEGRMREA------------------------ 285
+ M ++ + D++SYN+LI+G CKE R+ +A
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 286 -----------TRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP 332
++ +I D+ N TYT +IDG+CK L+ A + M L P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 333 GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFK 392
V YN +L LC++G + A +L EM D ++ N +I+ K GD+KSA
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 393 NKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG---Y 449
M +GL PD FTY LI+ F K+ L+ A M+D+GF P + I D Y
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD----AHICDSVLKY 643
Query: 450 C-KKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
C + D + L + + K + LD + ++ +C
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 178/384 (46%), Gaps = 11/384 (2%)
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC---KKGMHYEALSI 253
+ N L+ +SR+ E A +M E + + + L+ Y K G + L++
Sbjct: 73 FAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLAL 132
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCK 311
M + G ++ ++N L+ G C+ +A + E++ + P+ +Y T+I G+C+
Sbjct: 133 ---MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
EL++AL++ M+ G + T+ ++ C+ G++ +A L EM ++AD +
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
+LI + G+L +++LE G P TY LI GFCK+ +L+ A E+ M+
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
+ G P+ +Y+ ++DG C L L + + K +A Y +I +LCK +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFS 551
A ++ M+ D++ Y L G AS +L M K + S +
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 552 VPDGH-GENKVSQMF--WDHVVER 572
+ G EN++ Q +D +VE+
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEK 453
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 2/191 (1%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
NS + ++ + K+ M A + +MR+ +L+P + LLSSL K+G+ + W++
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ + +D ++ +N +I K+ D++ A+ LL M G+ PD+FTY+ LI+ + K
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTY 302
G EA+S DKM G D +S++ +G + T + ++ KD +
Sbjct: 613 GYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELT 672
Query: 303 TTLIDGYCKAN 313
T++D C ++
Sbjct: 673 CTVMDYMCNSS 683
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/524 (25%), Positives = 240/524 (45%), Gaps = 15/524 (2%)
Query: 39 TIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKH------FKT 92
+ Q+L ++S+ G+GPS++ + + L+ + ++Q++ K+K + T
Sbjct: 116 ALDQILGEMSVAGFGPSVNTCIEMVLGCVK--ANKLREGYDVVQMMRKFKFRPAFSAYTT 173
Query: 93 AQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQM 152
+ H D + +P V + + L+ +AK AL + ++M
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQ--ELGYEPTV--HLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 153 RLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDV 212
+ L + V + S K G ++ WK + +G+ + Y +I K+ +
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRL 289
Query: 213 ERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSL 272
+ A ++ +E+ VP + YNT+I Y G EA S+ ++ +G +++YN +
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 273 IYGFCKEGRMREATRMFSEIK-DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLY 331
+ K G++ EA ++F E+K DA PN TY LID C+A +LD A ++R+ M+ GL+
Sbjct: 350 LTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 332 PGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
P V T N ++ +LC+ ++ +A + EM K D IT +LI+ K+G + A K
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 392 KNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK 451
KML+S + + Y +LI F E ++ M++ +P + +D K
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 452 KDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVI 511
+ A+ +E ++ DA Y LI L K +LFY M+ G D+
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 512 YTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDG 555
Y + + K GK + A +LEEM + T Y SV DG
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG--SVIDG 631
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/548 (24%), Positives = 249/548 (45%), Gaps = 23/548 (4%)
Query: 4 IENQRQFIDGVCAIIVKGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKW 63
E RQ ++ +C ++ G WG + N LS + ++ + + + +F+W
Sbjct: 29 FEGNRQTVNDICNVLETGPWGPSAE-NTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRW 87
Query: 64 VESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPE 123
E H + +++ ++A+ ++F Q+L +++ F P
Sbjct: 88 YERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGF---------------GPS 132
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
VN+ + +V+ K+ ++ V + MR ++ +P A T L+ + ++++ +
Sbjct: 133 VNTCI--EMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL 190
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
+++ + G ++++ LI +K V+ A LL+EM+ + DI YN I + K
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVT 301
G A ++E G+ D V+Y S+I CK R+ EA MF ++ P
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
Y T+I GY A + D+A + E AKG P V YN IL L + G++ +A K+ EM
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM- 369
Query: 362 EKKVQADNI-TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
KK A N+ T N LI+ + G L +A + ++ M ++GL P+ T ++ CK +L
Sbjct: 370 -KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+ A + M TP ++ ++DG K VD + ++ L ++ VY +L
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
I+ + E K++ M S D + + +K+G+ + EE+ RR
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 541 IITAKIYS 548
+ A+ YS
Sbjct: 549 VPDARSYS 556
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 191/423 (45%), Gaps = 2/423 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N + ++ +V KS+ +A +FE+M P L+ L K G + +K++
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
++++ N +Y LI E ++ +M + PD+ NT + K
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTY 302
G + ++ ++++ D SY+ LI+G K G E +F +K+ + Y
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+IDG+CK ++++A ++ E M+ KG P V TY S++ L + R+ +A L E
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
K+++ + + ++LI+ + K+G + A ++++ GL P+ +T+ +L+ K +E+
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
A M + TP+ +Y +++G CK + E +G+ Y +I
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 483 RLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLII 542
L K I A LF + NG DS Y ++ + A ++ EE +R L I
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPI 830
Query: 543 TAK 545
K
Sbjct: 831 HNK 833
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 157/355 (44%), Gaps = 2/355 (0%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+ D NS V + L+ ++ +D ++++ M P L + + K G
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ + + V + Y+ LIH K+ +L M+E+G V D YN +
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP 297
I +CK G +A + ++M+ +G +V+Y S+I G K R+ EA +F E K
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 298 --NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
N V Y++LIDG+ K +D+A + E + KGL P + T+NS+L L + I +A
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
M E K + +T LIN K+ A F +M + G+KP +Y +I G
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
K + A L G P Y+ +++G + +L +E +GL
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 129/278 (46%), Gaps = 2/278 (0%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
++++ + ++ + K A Q+ E+M+ +P + ++ L K + + +
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
+ + LN+ IY+ LI K ++ A +L E+ +KG+ P+++T+N+L+ K
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVT 301
EAL M+ + V+Y LI G CK + +A + E++ P+ ++
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
YTT+I G KA + +A + + +A G P A YN+++ L R DA L E
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
+ + N TC L++ K L+ A + E+G
Sbjct: 825 RRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 105/249 (42%)
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
+Y +L+ + D ++ M G P V T ++ + ++R+ ++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ K + TLI A+S + L +M E G +P + LI GF K +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+SA LL M + Y+ +D + K VD E + GL D Y ++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
I LCK +++ A ++F H+E N + Y ++ Y +GK A ++LE +
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 541 IITAKIYSC 549
I + Y+C
Sbjct: 340 IPSVIAYNC 348
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 227/509 (44%), Gaps = 52/509 (10%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
P N L+ + K A +F+ M ++P L A + L+ K G +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
K+ + + GV L++ +++ I KS D+ A + M +G+ P++ TY LI
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDATP--- 297
C+ G YEA + ++ + G+ IV+Y+SLI GFCK G +R ++ + IK P
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 298 ---------------------------------NHVTYTTLIDGYCKANELDQALKVREL 324
N V + +LIDG+C+ N D+ALKV L
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 325 MEAKGLYPGVATYNSILR------KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
M G+ P VAT+ +++R C+ + +L + M K+ AD CN +I+
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 379 YSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPS 438
K ++ A KF N ++E ++PD TY +I G+C + L+ A+ + + F P+
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 439 YCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFY 498
+ + ++ CK +++D + + KG +A Y L+ K IE + KLF
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 701
Query: 499 HMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGE 558
M+ GIS V Y+ + K G+ A+N+ + +L+ Y+ G
Sbjct: 702 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI----RGY 757
Query: 559 NKVSQ-----MFWDHVVERGLMSRNTMRK 582
KV + + ++H++ G+ + +++
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPDDLLQR 786
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 170/359 (47%), Gaps = 8/359 (2%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S L+ + K + ++E M P + VL+ L K G + +++
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL------YCK 243
+ LN+ ++N LI + + A ++ M G+ PD+ T+ T++ + +CK
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVT 301
L + D M+R I+ DI N +I+ K R+ +A++ F+ + + P+ VT
Sbjct: 550 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 609
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
Y T+I GYC LD+A ++ EL++ P T ++ LC++ + A ++ + M+
Sbjct: 610 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 669
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
EK + + +T L++ +SK D++ + K +M E G+ P +Y +I G CK ++
Sbjct: 670 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 729
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
A + +DA P +Y+ ++ GYCK + L + L G+ D + RAL
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 236/542 (43%), Gaps = 65/542 (11%)
Query: 5 ENQRQFIDGVCAIIVKGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKWV 64
++ + G+ I +G++ L L + VLL L P+ + +F+W
Sbjct: 37 DSAKALAAGISKAIKEGNFNLLDSSVYGSNLQRNETNLVLLSLESE---PNSALKYFRWA 93
Query: 65 EST---PHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIA---HRDFXXXXXXXXXXXRI 118
E + P + + + +L + F A ++ D++ +DF
Sbjct: 94 EISGKDPSF-------YTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR------ 140
Query: 119 HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTV--LLSSLLKDGT 176
D +++ V +L+ + M AL++F + QL +P +V +L+SL+
Sbjct: 141 --DRSLDADVCKFLMECCCRYGMVDKALEIF--VYSTQLGVVIPQDSVYRMLNSLIGSDR 196
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+++ +L + G+ E GV F +
Sbjct: 197 VDLIADHFDKLCRGGI------------------------------EPSGVSAHGFVLD- 225
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD-- 294
+L+CK G +AL + G + IVS N ++ G + ++ A+R+ S + D
Sbjct: 226 --ALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCG 281
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
PN VT+ TLI+G+CK E+D+A + ++ME +G+ P + Y++++ + G + +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
KL ++ K V+ D + ++ I+ Y K GDL +A +ML G+ P+ TY LI G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
C+ + A + +L G PS +YS ++DG+CK N+ + AL ++ + G D
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
+Y L+ L K + A + M G I + V++ SL + + + A V
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 535 MA 536
M
Sbjct: 522 MG 523
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 194/387 (50%), Gaps = 32/387 (8%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
N+ Y+ I KS +++ A + + M+ + P++ T+ LI YCK G A+S+
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKA 312
+M R ++L++V+Y +LI GFCK+G M+ A M+S + + PN + YTT+IDG+ +
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
+ D A+K M +G+ + Y I+ LC +G++++A +++ +M + + D +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL---------ESA 423
T++NAY K G +K+A+ +K++E G +PD +I G K +L E A
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA 401
Query: 424 KELLFGML---------------------DAGFTPSYCSYSWIVDGYCKKDNVDAILALP 462
++++ +L +AG P Y+ + G CK+ N+ L
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 463 DEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKS 522
+ +GL LD Y LI L + A ++F M +GIS DS ++ L AY K
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKE 521
Query: 523 GKTSVASNVLEEMAKRRLIITAKIYSC 549
G + AS++L +M +R L+ C
Sbjct: 522 GNMAAASDLLLDMQRRGLVTAVSDADC 548
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 172/327 (52%), Gaps = 6/327 (1%)
Query: 217 QLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGF 276
+ L + +G P ++N+++S CK G A I M R G D++SYNSLI G
Sbjct: 42 KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGH 101
Query: 277 CKEGRMREATRMFSEIKDA-----TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLY 331
C+ G +R A+ + ++ + P+ V++ +L +G+ K LD+ +M K
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCS 160
Query: 332 PGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
P V TY++ + C+ G ++ A K + M + + +T LI+ Y K GDL+ A+
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 392 KNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK 451
+M + + TY ALI GFCK E++ A+E+ M++ P+ Y+ I+DG+ +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 452 KDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVI 511
+ + D + + L++G+ LD + Y +I LC +++ A ++ ME + + D VI
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 512 YTSLAYAYWKSGKTSVASNVLEEMAKR 538
+T++ AY+KSG+ A N+ ++ +R
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIER 367
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 186/372 (50%), Gaps = 7/372 (1%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+ KS Q AL+ F M+ L P++ T L+ K G V ++K + + + LN
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ Y LI K +++RA+++ + M E V P+ Y T+I + ++G A+
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKAN 313
KM +G+ LDI +Y +I G C G+++EAT + +++ D P+ V +TT+++ Y K+
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
+ A+ + + +G P V ++++ + ++G++ +A ++ EK A+++
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFCIEK---ANDVMYT 407
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
LI+A K GD + +K+ E+GL PD F Y + I G CK L A +L M+
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
G +Y+ ++ G K + + DE L+ G+ D++V+ LIR K + A
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
Query: 494 EKLFYHMEGNGI 505
L M+ G+
Sbjct: 528 SDLLLDMQRRGL 539
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 206/477 (43%), Gaps = 69/477 (14%)
Query: 141 MTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYN 200
M ++ALQ ++R P C + L+ + K LV G + +N
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 201 CLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG-MHYEALSIQDKMER 259
++ K V+ A+ +++ M G PD+ +YN+LI +C+ G + +L ++
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 260 EGI--NLDIVSYNSLIYGF----------------------------------CKEGRMR 283
G DIVS+NSL GF CK G ++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 284 EATRMFSEIK-DA-TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSIL 341
A + F +K DA +PN VT+T LIDGYCKA +L+ A+ + + M + V TY +++
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 342 RKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK 401
C+ G ++ A ++ + M E +V+ +++ T+I+ + + GD +A+KF KML G++
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL 461
D Y +I G C +L+ A E++ M + P ++ +++ Y K + A + +
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 462 PDEFLSKG---------------------------LCLDAS---VYRALIRRLCKIEQIE 491
+ + +G C++ + +Y LI LCK
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
E+LF + G+ D +YTS K G A + M + L++ Y+
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYT 477
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 169/348 (48%), Gaps = 7/348 (2%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N + L+ Y K+ + A+ ++++MR ++ ++ T L+ K G +++
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
R+V+D V N +Y +I + D + A + L +M +G+ DI Y +IS C
Sbjct: 257 SRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGN 316
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTY 302
G EA I + ME+ + D+V + +++ + K GRM+ A M+ ++ + P+ V
Sbjct: 317 GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+T+IDG K +L +A+ + +A + Y ++ LC++G + +L +++SE
Sbjct: 377 STMIDGIAKNGQLHEAIVYFCIEKANDV-----MYTVLIDALCKEGDFIEVERLFSKISE 431
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
+ D + I K G+L A K K +M++ GL D Y LI+G +
Sbjct: 432 AGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVE 491
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
A+++ ML++G +P + ++ Y K+ N+ A L + +GL
Sbjct: 492 ARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 141/285 (49%), Gaps = 7/285 (2%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+ D E NS V + ++ + + + +A++ +M ++ + A V++S L +G
Sbjct: 260 VEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKL 319
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+I + + + +V ++ I+ +++A KS ++ A + +++ E+G PD+ +T+
Sbjct: 320 KEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM 379
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-- 295
I K G +EA+ + +E+ + V Y LI CKEG E R+FS+I +A
Sbjct: 380 IDGIAKNGQLHEAI-VYFCIEKA----NDVMYTVLIDALCKEGDFIEVERLFSKISEAGL 434
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ YT+ I G CK L A K++ M +GL + Y +++ L G + +A +
Sbjct: 435 VPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQ 494
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGL 400
+ +EM + D+ + LI AY K G++ +A M GL
Sbjct: 495 VFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 136/520 (26%), Positives = 235/520 (45%), Gaps = 21/520 (4%)
Query: 54 PSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXX 113
P I+F FF W++ S Q AM++ILA+ A + ++
Sbjct: 99 PEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLI 158
Query: 114 XXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK 173
+L W+ Y K M + L FE+M P + C ++L L
Sbjct: 159 DGSFDKLIALKLLDLLLWV---YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRD 215
Query: 174 DGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFT 233
N +++ +++ G++ + +N ++ +C K+ D+ER ++ EM+ + + T
Sbjct: 216 SRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVT 275
Query: 234 YNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK 293
YN LI+ + K G EA M R G + S+N LI G+CK+G +A + E+
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 294 DAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIR 351
+A P TY I C +D A REL+ + P V +YN+++ + G+
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDA---RELLSSMAA-PDVVSYNTLMHGYIKMGKFV 391
Query: 352 DANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI 411
+A+ L +++ + +T NTLI+ + G+L+ A + K +M + PD TY L+
Sbjct: 392 EASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Query: 412 HGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKG-L 470
GF K L A E+ ML G P +Y+ G + + D L +E ++
Sbjct: 452 KGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH 511
Query: 471 CLDASVYRALIRRLCK----IEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTS 526
D ++Y I LCK ++ IE K+F G+ D V YT++ Y ++G+
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR----VGLVPDHVTYTTVIRGYLENGQFK 567
Query: 527 VASNVLEEMAKRRLIITAKIYSCFSVPDGHGE-NKVSQMF 565
+A N+ +EM ++RL + Y F + GH + ++ Q F
Sbjct: 568 MARNLYDEMLRKRLYPSVITY--FVLIYGHAKAGRLEQAF 605
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 157/309 (50%), Gaps = 6/309 (1%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
+I YN LI +S ++E A++L EM + + PD+ TY TL+ + K G A +
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPNHVTYTTLIDGYCK 311
D+M R+GI D +Y + G + G +A R+ E+ P+ Y IDG CK
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
L +A++ + + GL P TY +++R ++G+ + A L +EM K++ IT
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
LI ++K G L+ A ++ +M + G++P+ T+ AL++G CK ++ A L M
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK---IE 488
+ G P+ SY+ ++ C + + ++ L E L K + D +RAL + L K
Sbjct: 648 EEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESR 707
Query: 489 QIECAEKLF 497
++E E+L
Sbjct: 708 EVEFLERLL 716
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 202/481 (41%), Gaps = 104/481 (21%)
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
SRM A V+E M + + P + +L S K G V KI + + + +
Sbjct: 216 SRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVT 275
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
YN LI+ SK+ +E A++ +M G +++N LI YCK+G+ +A + D+M
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 259 REGI-------NL------------------------DIVSYNSLIYGFCKEGRMREATR 287
GI N+ D+VSYN+L++G+ K G+ EA+
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 288 MFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
+F +++ D P+ VTY TLIDG C++ L+ A +++E M + ++P V TY ++++
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455
Query: 346 QDG--------------------------------RIRDANK---LLNEMSEKKVQADNI 370
++G R+ D++K L EM A ++
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 515
Query: 371 TC-NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
T N I+ K+G+L A++F+ K+ GL PD TY +I G+ + + + A+ L
Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575
Query: 430 MLDAGFTPSYCSYSWIVDGY-----------------------------------CKKDN 454
ML PS +Y ++ G+ CK N
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN 635
Query: 455 VDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTS 514
+D + +G+ + Y LI + C E+ E KL+ M I D + +
Sbjct: 636 IDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRA 695
Query: 515 L 515
L
Sbjct: 696 L 696
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 68/140 (48%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A ++++M +L P + VL+ K G ++ + + GV N+ +N L++
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
K+ +++ A + L +MEE+G+ P+ ++Y LIS C E + + +M + I
Sbjct: 629 GMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Query: 265 DIVSYNSLIYGFCKEGRMRE 284
D ++ +L K+ RE
Sbjct: 689 DGYTHRALFKHLEKDHESRE 708
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 202/412 (49%), Gaps = 11/412 (2%)
Query: 164 CTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEME 223
+ ++S+L + G + +I + G +Y ++ LI A +S E A + N M+
Sbjct: 236 ASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 224 EKGVVPDIFTYNTLISLYCKKGMHYEALS-IQDKMEREGINLDIVSYNSLIYGFCKEGRM 282
E G+ P++ TYN +I K GM ++ ++ D+M+R G+ D +++NSL+ C G +
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGL 354
Query: 283 REATR-MFSEIKDATPNH--VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNS 339
EA R +F E+ + +Y TL+D CK ++D A ++ M K + P V +Y++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
++ + GR +A L EM + D ++ NTL++ Y+K+G + AL +M G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAIL 459
+K D TY AL+ G+ K + + K++ M P+ +YS ++DGY K +
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 460 ALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAY 519
+ EF S GL D +Y ALI LCK + A L M GIS + V Y S+ A+
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Query: 520 WKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVE 571
G+++ + L ++ S + +G N+V Q+F E
Sbjct: 595 ---GRSATMDRSADYSNGGSLPFSSSALSALTETEG---NRVIQLFGQLTTE 640
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 172/332 (51%), Gaps = 3/332 (0%)
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT-NVVWKIHKR 186
S L+ Y +S + ++A+ VF M+ Y L+P+L ++ + K G V K
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
+ ++GV + +N L+ CS+ E A+ L +EM + + D+F+YNTL+ CK G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTT 304
A I +M + I ++VSY+++I GF K GR EA +F E++ + V+Y T
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
L+ Y K ++AL + M + G+ V TYN++L + G+ + K+ EM +
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
V + +T +TLI+ YSK G K A++ + +GL+ D Y ALI CK + SA
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 425 ELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
L+ M G +P+ +Y+ I+D + + +D
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 79/196 (40%), Gaps = 5/196 (2%)
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
E++ + +I+ + G + A + G + + ALI + + E
Sbjct: 226 ERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHE 285
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD--AILALPDEFLSKGLCLDASVYRA 479
A + M + G P+ +Y+ ++D C K ++ + DE G+ D + +
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
L+ + E A LF M I D Y +L A K G+ +A +L +M +R
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 540 LIITAKIYSCFSVPDG 555
++ YS +V DG
Sbjct: 405 IMPNVVSYS--TVIDG 418
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 209/448 (46%), Gaps = 37/448 (8%)
Query: 127 QVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKR 186
Q S L++ K R + + ++M LKP++ T+ + L + G N ++I KR
Sbjct: 224 QTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKR 283
Query: 187 LVQDGVVLNIYIYNCLIHA--------CSK---------------------------SRD 211
+ +G ++ Y LI A C+K +RD
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNS 271
++ KQ +EME+ G VPD+ T+ L+ CK G EA D M +GI ++ +YN+
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 272 LIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKG 329
LI G + R+ +A +F ++ P TY ID Y K+ + AL+ E M+ KG
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 330 LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
+ P + N+ L L + GR R+A ++ + + + D++T N ++ YSK+G++ A+
Sbjct: 464 IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523
Query: 390 KFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGY 449
K ++M+E+G +PD +LI+ K D ++ A ++ M + P+ +Y+ ++ G
Sbjct: 524 KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 450 CKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDS 509
K + + L + + KG + + L LCK +++ A K+ + M G D
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 510 VIYTSLAYAYWKSGKTSVASNVLEEMAK 537
Y ++ + K+G+ A +M K
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 196/417 (47%), Gaps = 2/417 (0%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
+N+ + L+ KSR +A++V+ +M L +P L + L+ L K + V +
Sbjct: 186 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGL 245
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
K + G+ N+Y + I ++ + A ++L M+++G PD+ TY LI C
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI-KDA-TPNHVT 301
A + +KM+ D V+Y +L+ F + + +SE+ KD P+ VT
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
+T L+D CKA +A ++M +G+ P + TYN+++ L + R+ DA +L M
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
V+ T I+ Y K GD SAL+ KM G+ P+ A ++ K
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
AK++ +G+ D G P +Y+ ++ Y K +D + L E + G D V +LI
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 482 RRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
L K ++++ A K+F M+ + V Y +L K+GK A + E M ++
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 201/459 (43%), Gaps = 45/459 (9%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ K+ Q+A+++FE M P+ L L K+ + K+ +++ G
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI------------- 238
V +++ YN +I K+ V+ A ++M+ K V PD T TL+
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAY 697
Query: 239 ------------------------SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIY 274
S+ + G+ A+S +++ GI D S I
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPII 756
Query: 275 GF-CKEGRMREATRMFSEI-KD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGL 330
+ CK + A +F + KD P TY LI G +A+ ++ A V +++ G
Sbjct: 757 RYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 331 YPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK 390
P VATYN +L + G+I + +L EMS + +A+ IT N +I+ K G++ AL
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 391 -FKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGY 449
+ + M + P TY LI G K L AK+L GMLD G P+ Y+ +++G+
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 450 CKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDS 509
K DA AL + +G+ D Y L+ LC + +++ F ++ +G++ D
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 510 VIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
V Y + KS + A + EM R IT +Y+
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSR-GITPDLYT 1034
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 164/362 (45%), Gaps = 5/362 (1%)
Query: 127 QVLSWLVIHYAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK 185
+L ++ + K A +FE+ + ++P LP +L+ LL+ + +
Sbjct: 750 SILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFL 809
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
++ G + ++ YN L+ A KS ++ +L EM + T+N +IS K G
Sbjct: 810 QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG 869
Query: 246 MHYEALSIQ-DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTY 302
+AL + D M + +Y LI G K GR+ EA ++F + D PN Y
Sbjct: 870 NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIY 929
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
LI+G+ KA E D A + + M +G+ P + TY+ ++ LC GR+ + E+ E
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES-GLKPDPFTYKALIHGFCKMDELE 421
+ D + N +IN K L+ AL N+M S G+ PD +TY +LI +E
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
A ++ + AG P+ +++ ++ GY + A+ ++ G + Y L
Sbjct: 1050 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLP 1109
Query: 482 RR 483
R
Sbjct: 1110 NR 1111
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 197/460 (42%), Gaps = 36/460 (7%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
Y+K +A+++ +M +P + L+++L K + WK+ R+ + +
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ YN L+ K+ ++ A +L M +KG P+ T+NTL CK AL +
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT-PNHVTYTTLIDGYCKANE 314
KM G D+ +YN++I+G K G+++EA F ++K P+ VT TL+ G KA+
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASL 692
Query: 315 LDQALKV-----------------RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
++ A K+ +L+ + G+ S +L +G RD + +L
Sbjct: 693 IEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSIL 752
Query: 358 NEMSEKKVQADNIT-CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
+ + +N++ TL ++K DL G++P TY LI G +
Sbjct: 753 VPIIRYSCKHNNVSGARTLFEKFTK--DL-------------GVQPKLPTYNLLIGGLLE 797
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
D +E A+++ + G P +Y++++D Y K +D + L E + +
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857
Query: 477 YRALIRRLCKIEQIECAEKLFYH-MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ +I L K ++ A L+Y M S + Y L KSG+ A + E M
Sbjct: 858 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Query: 536 AKRRLIITAKIYSCFSVPDGH-GENKVSQMFWDHVVERGL 574
IY+ G GE + + +V+ G+
Sbjct: 918 LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 174/410 (42%), Gaps = 37/410 (9%)
Query: 163 ACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM 222
C +L +L DG + + + + + + Y + + S +++A L +M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 223 EEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKE--- 279
E G V + ++YN LI L K EA+ + +M EG + +Y+SL+ G K
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 280 --------------------------------GRMREATRMFSEIKD--ATPNHVTYTTL 305
G++ EA + + D P+ VTYT L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
ID C A +LD A +V E M+ P TY ++L + + + + +EM +
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
D +T L++A K G+ A + M + G+ P+ TY LI G ++ L+ A E
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
L M G P+ +Y +D Y K + + L ++ +KG+ + A + L
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
K + A+++FY ++ G+ DSV Y + Y K G+ A +L EM
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 8/244 (3%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVF-EQMRLYQLKPHLPACTV--LLSSLLKDGTTNV 179
E N+ + ++ K+ DAL ++ + M P ACT L+ L K G
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP--TACTYGPLIDGLSKSGRLYE 909
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
++ + ++ G N IYN LI+ K+ + + A L M ++GV PD+ TY+ L+
Sbjct: 910 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA---T 296
C G E L +++ G+N D+V YN +I G K R+ EA +F+E+K + T
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P+ TY +LI A +++A K+ ++ GL P V T+N+++R G+ A +
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Query: 357 LNEM 360
M
Sbjct: 1090 YQTM 1093
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%)
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
T N +L L DG++ + + + M ++ ++ D T T+ + S G LK A KM
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
E G + ++Y LIH K A E+ M+ GF PS +YS ++ G K+ ++
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
D+++ L E + GL + + IR L + +I A ++ M+ G D V YT L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 516 AYAYWKSGKTSVASNVLEEMAKRR 539
A + K A V E+M R
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGR 323
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 122/302 (40%), Gaps = 37/302 (12%)
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLI 306
E + D M++ I D +Y ++ +G +++A ++++ N +Y LI
Sbjct: 136 EMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLI 195
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
K+ +A++V M +G P + TY+S++ L G+ RD + ++ + E
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL---GKRRDIDSVMGLLKE---- 248
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
M GLKP+ +T+ I + ++ A E+
Sbjct: 249 ----------------------------METLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
L M D G P +Y+ ++D C +D + ++ + D Y L+ R
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 487 IEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKI 546
++ ++ + ME +G D V +T L A K+G A + L+ M + ++
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 547 YS 548
Y+
Sbjct: 401 YN 402
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 152/593 (25%), Positives = 253/593 (42%), Gaps = 120/593 (20%)
Query: 50 NGYGPSISFPFFKWVESTPH---YTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFX 106
N P +++ FK + S+P + SL + + +IL + K + Q++ + I
Sbjct: 12 NTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQ 71
Query: 107 XXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFE--QMRLYQLKPHLPAC 164
S +LS + I +AKS A F+ + R + KP +
Sbjct: 72 KTKL---------------SSLLSVVSI-FAKSNHIDKAFPQFQLVRSRFPENKPSVYLY 115
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
+LL S +K+ V ++K +V G+ Y +N LI A S V+ A++L +EM E
Sbjct: 116 NLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE 175
Query: 225 KGVVPDIFT-----------------------------------YNTLISLYCKKGMHYE 249
KG P+ FT YNT++S +C++G + +
Sbjct: 176 KGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDD 235
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD------ATPNHVTYT 303
+ + +KM EG+ DIV++NS I CKEG++ +A+R+FS+++ PN +TY
Sbjct: 236 SEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYN 295
Query: 304 TLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
++ G+CK L+ A + E + + +YN L+ L + G+ +A +L +M++K
Sbjct: 296 LMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDK 355
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC-------- 415
+ + N L++ K+G L A M +G+ PD TY L+HG+C
Sbjct: 356 GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAA 415
Query: 416 ---------------------------KMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
KM + A+ELL M + G+ + + IVDG
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Query: 449 YCKKDNVD----------------------AILALPDEFLSKGLCL-DASVYRALIRRLC 485
C +D + + L D+ L + CL D Y L+ LC
Sbjct: 476 LCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLC 535
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
K + A+ LF M G + DSV Y + + K GK S A VL++M K+
Sbjct: 536 KAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 202/480 (42%), Gaps = 64/480 (13%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N LV Y K+ +T L++ M + + P+ ++SS ++G + K+
Sbjct: 181 NEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMV 240
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVV----PDIFTYNTLISL 240
+++ ++G+V +I +N I A K V A ++ ++ME + P+ TYN ++
Sbjct: 241 EKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKG 300
Query: 241 YCKKGM-----------------------------------HYEALSIQDKMEREGINLD 265
+CK G+ EA ++ +M +GI
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPS 360
Query: 266 IVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRE 323
I SYN L+ G CK G + +A + +K P+ VTY L+ GYC ++D A + +
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420
Query: 324 LMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
M P T N +L L + GRI +A +LL +M+EK D +TCN +++ G
Sbjct: 421 EMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480
Query: 384 DLKSALKF-----------------------KNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+L A++ + ++E+ PD TY L++G CK
Sbjct: 481 ELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRF 540
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
AK L M+ P +Y+ + +CK+ + + + + KG Y +L
Sbjct: 541 AEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
I L QI L M+ GIS + Y + + K A+N+L+EM ++ +
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 184/401 (45%), Gaps = 25/401 (6%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
P NS + ++ + K + +DA +FE +R L + + L L++ G
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+ K++ G+ +IY YN L+ K + AK ++ M+ GV PD TY L+ Y
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNH 299
C G A S+ +M R + + N L++ K GR+ EA + ++ K +
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDT 466
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKG-----------------------LYPGVAT 336
VT ++DG C + ELD+A+++ + M G P + T
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLIT 526
Query: 337 YNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML 396
Y+++L LC+ GR +A L EM +K+Q D++ N I+ + K G + SA + M
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 397 ESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
+ G TY +LI G +++ L+ M + G +P+ C+Y+ + C+ + V+
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 457 AILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
L DE + K + + ++ LI CK+ + A+++F
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 175/406 (43%), Gaps = 59/406 (14%)
Query: 141 MTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYN 200
M DA + M+ + P LL G + + + ++++ + N Y N
Sbjct: 376 MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Query: 201 CLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMERE 260
L+H+ K + A++LL +M EKG D T N ++ C G +A+ I M
Sbjct: 436 ILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVH 495
Query: 261 G-----------INL------------DIVSYNSLIYGFCKEGRMREATRMFSEI--KDA 295
G I L D+++Y++L+ G CK GR EA +F+E+ +
Sbjct: 496 GSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ V Y I +CK ++ A +V + ME KG + + TYNS++ L +I + +
Sbjct: 556 QPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHG 615
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
L++EM EK + + T NT I + ++ A ++M++ + P+ F++K LI FC
Sbjct: 616 LMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFC 675
Query: 416 KMDELESAKE----------------------------------LLFGMLDAGFTPSYCS 441
K+ + + A+E LL +LD GF
Sbjct: 676 KVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFL 735
Query: 442 YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
Y +V+ CKKD ++ + + + +G D + +I L K+
Sbjct: 736 YKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKM 781
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 169/381 (44%), Gaps = 59/381 (15%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A + ++M P+ C +LL SL K G + ++ +++ + G L+ N ++
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 205 ACSKSRDVERAKQLLNEME-----------------------EKGVVPDIFTYNTLISLY 241
S ++++A +++ M E +PD+ TY+TL++
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNH 299
CK G EA ++ +M E + D V+YN I+ FCK+G++ A R+ ++ K +
Sbjct: 535 CKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSL 594
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
TY +LI G N++ + + + M+ KG+ P + TYN+ ++ LC+ ++ DA LL+E
Sbjct: 595 ETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Query: 360 MSEKKVQADNITCNTLINAYSKI----------------------------------GDL 385
M +K + + + LI A+ K+ G L
Sbjct: 655 MMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQL 714
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
A + +L+ G + F YK L+ CK DELE A +L M+D G+ + +
Sbjct: 715 LKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPV 774
Query: 446 VDGYCKKDNVDAILALPDEFL 466
+DG K N + D+ +
Sbjct: 775 IDGLGKMGNKKEANSFADKMM 795
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 7/272 (2%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S L+ K+ +A +F +M +L+P A + + K G + +++ K + +
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
G ++ YN LI + L++EM+EKG+ P+I TYNT I C+ +
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED 647
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF-SEIKDATPNHVTYTTLIDG 308
A ++ D+M ++ I ++ S+ LI FCK A +F + + Y+ + +
Sbjct: 648 ATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNE 707
Query: 309 YCKANELDQALKVRELMEA---KGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
A +L LK EL+EA +G G Y ++ LC+ + A+ +L++M ++
Sbjct: 708 LLAAGQL---LKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGY 764
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLE 397
D +I+ K+G+ K A F +KM+E
Sbjct: 765 GFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 5/277 (1%)
Query: 159 PHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQL 218
P L + LL+ L K G + ++ + + + YN IH K + A ++
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 219 LNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCK 278
L +ME+KG + TYN+LI K +E + D+M+ +GI+ +I +YN+ I C+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 279 EGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVREL-MEAKGLYPGVA 335
++ +AT + E+ K+ PN ++ LI+ +CK + D A +V E + G G+
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL- 700
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
Y+ + +L G++ A +LL + ++ + L+ + K +L+ A +KM
Sbjct: 701 -YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKM 759
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
++ G DP +I G KM + A M++
Sbjct: 760 IDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%)
Query: 401 KPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILA 460
KP + Y L+ K +E L M+ G P +++ ++ C VDA
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 461 LPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYW 520
L DE KG + + L+R CK + +L ME G+ + VIY ++ ++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 521 KSGKTSVASNVLEEMAKRRLI 541
+ G+ + ++E+M + L+
Sbjct: 229 REGRNDDSEKMVEKMREEGLV 249
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 194/391 (49%), Gaps = 9/391 (2%)
Query: 155 YQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVER 214
+ + P+ T +SSL K+ N W I L+++ L +N L+ ++ D+ R
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 215 AKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG------INLDIVS 268
L+ +M+E + PD+ T LI+ CK EAL + +KM + I D +
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIH 372
Query: 269 YNSLIYGFCKEGRMREATRMFSEIK---DATPNHVTYTTLIDGYCKANELDQALKVRELM 325
+N+LI G CK GR++EA + +K PN VTY LIDGYC+A +L+ A +V M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 326 EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDL 385
+ + P V T N+I+ +C+ + A +M ++ V+ + +T TLI+A + ++
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
+ A+ + KMLE+G PD Y ALI G C++ A ++ + + GF+ +Y+ +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 446 VDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
+ +C K+N + + + + +G D+ Y LI K + E E++ M +G+
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 506 SGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
Y ++ AY G+ A + ++M
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 166/334 (49%), Gaps = 3/334 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N+ + L+ Y ++ + A +V +M+ ++KP++ ++ + + N+
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ ++GV N+ Y LIHAC +VE+A +M E G PD Y LIS C+
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTY 302
++A+ + +K++ G +LD+++YN LI FC + + M ++++ P+ +TY
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITY 584
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS- 361
TLI + K + + ++ E M GL P V TY +++ C G + +A KL +M
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
KV + + N LINA+SK+G+ AL K +M ++P+ TY AL + + E
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
+ +L+ M++ P+ + +++ D +
Sbjct: 705 TLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 136/273 (49%), Gaps = 5/273 (1%)
Query: 124 VNSQVLSWLVIHYAKSRMT--QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
V V++++ + +A ++ + A+ +E+M P L+S L + +
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++ ++L + G L++ YN LI + E+ ++L +ME++G PD TYNTLIS +
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPN 298
K + ++M +G++ + +Y ++I +C G + EA ++F ++ PN
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
V Y LI+ + K QAL ++E M+ K + P V TYN++ + L + + KL++
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
EM E+ + + IT L+ S +L KF
Sbjct: 712 EMVEQSCEPNQITMEILMERLSGSDELVKLRKF 744
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 231/499 (46%), Gaps = 44/499 (8%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+ D +N + L+ + K+ AL +F++M P+ +VL+ K+G
Sbjct: 331 LSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEM 390
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ +K++ G+ +++ + +I K + E A +L +E E G+ ++F NT+
Sbjct: 391 EKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTI 449
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDA 295
+S CK+G EA + KME GI ++VSYN+++ G C++ M A +FS I K
Sbjct: 450 LSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGL 509
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
PN+ TY+ LIDG + ++ AL+V M + + Y +I+ LC+ G+ A +
Sbjct: 510 KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARE 569
Query: 356 LLNEMSEKK------------------------------------VQADNITCNTLINAY 379
LL M E+K + + IT +L+N
Sbjct: 570 LLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
K + AL+ +++M G+K D Y ALI GFCK +ESA L +L+ G PS
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQ 689
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
Y+ ++ G+ N+ A L L + L GL D Y LI L K + A +L+
Sbjct: 690 PIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTE 749
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGH-GE 558
M+ G+ D +IYT + K G+ + EEM K + IY+ +V GH E
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN--AVIAGHYRE 807
Query: 559 NKVSQMFW--DHVVERGLM 575
+ + F D ++++G++
Sbjct: 808 GNLDEAFRLHDEMLDKGIL 826
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 222/452 (49%), Gaps = 40/452 (8%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
EVNS+ ++L+ Y+K R T A+ + QM + P P LS+L++ + +
Sbjct: 160 EVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKE 219
Query: 183 IHKRLVQDGV-------------------------VLNIYI----------YNCLIHACS 207
++ R+V GV VL+ I Y+ + AC
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 208 KSRDVERAKQLLNEMEEKGV-VPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDI 266
K+ D+ A LL EM+EK + VP TY ++I K+G +A+ ++D+M +GI++++
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 267 VSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVTYTTLIDGYCKANELDQALKVREL 324
V+ SLI G CK + A +F E + +PN VT++ LI+ + K E+++AL+ +
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGD 384
ME GL P V ++I++ + + +A KL +E E + A+ CNT+++ K G
Sbjct: 400 MEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGK 458
Query: 385 LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW 444
A + +KM G+ P+ +Y ++ G C+ ++ A+ + +L+ G P+ +YS
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSI 518
Query: 445 IVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM-EGN 503
++DG + + L + + S + ++ VY+ +I LCK+ Q A +L +M E
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
Query: 504 GISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ + Y S+ ++K G+ A EEM
Sbjct: 579 RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 193/391 (49%), Gaps = 7/391 (1%)
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
+LSWL K T +A ++ +M + P++ + ++ + ++ + +
Sbjct: 449 ILSWL----CKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
++ G+ N Y Y+ LI C ++ D + A +++N M + + Y T+I+ CK G
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 248 YEALSIQDKM-EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTT 304
+A + M E + + + +SYNS+I GF KEG M A + E+ +PN +TYT+
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
L++G CK N +DQAL++R+ M+ KG+ + Y +++ C+ + A+ L +E+ E+
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
+ N+LI+ + +G++ +AL KML+ GL+ D TY LI G K L A
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 425 ELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
EL M G P Y+ IV+G KK ++ + +E + + +Y A+I
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 485 CKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+ ++ A +L M GI D + L
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 127/528 (24%), Positives = 235/528 (44%), Gaps = 47/528 (8%)
Query: 58 FPFFKWVEST-------PHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXX 110
PFF +V T T + + M+ I + T Q+L + + R+
Sbjct: 195 IPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTT--QLLMRASLREEKPAEA 252
Query: 111 XXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQL-KPHLPACTVLLS 169
I E +S + S V K+ A + +M+ +L P T ++
Sbjct: 253 LEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVIL 312
Query: 170 SLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVP 229
+ +K G + ++ ++ DG+ +N+ LI K+ D+ A L ++ME++G P
Sbjct: 313 ASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSP 372
Query: 230 DIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF 289
+ T++ LI + K G +AL KME G+ + +++I G+ K + EA ++F
Sbjct: 373 NSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLF 432
Query: 290 SE-IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
E + N T++ CK + D+A ++ ME++G+ P V +YN+++ C+
Sbjct: 433 DESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQK 492
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
+ A + + + EK ++ +N T + LI+ + D ++AL+ N M S ++ + Y+
Sbjct: 493 NMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQ 552
Query: 409 ALIHGFCKMDELESAKELLFGMLDA----------------------------------- 433
+I+G CK+ + A+ELL M++
Sbjct: 553 TIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCG 612
Query: 434 -GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
G +P+ +Y+ +++G CK + +D L + DE +KG+ LD Y ALI CK +E
Sbjct: 613 NGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMES 672
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
A LF + G++ IY SL + G A ++ ++M K L
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGL 720
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 155/309 (50%), Gaps = 3/309 (0%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG-VVLNIYIYNC 201
Q+AL+V M ++ + +++ L K G T+ ++ ++++ + ++ YN
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I K +++ A EM G+ P++ TY +L++ CK +AL ++D+M+ +G
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
+ LDI +Y +LI GFCK M A+ +FSE+ + P+ Y +LI G+ + AL
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+ + M GL + TY +++ L +DG + A++L EM + D I ++N
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
SK G +K +M ++ + P+ Y A+I G + L+ A L MLD G P
Sbjct: 770 SKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG 829
Query: 440 CSYSWIVDG 448
++ +V G
Sbjct: 830 ATFDILVSG 838
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 166/338 (49%), Gaps = 5/338 (1%)
Query: 148 VFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACS 207
VF + LKP+ ++L+ ++ ++ + + +N +Y +I+
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 208 KSRDVERAKQLL-NEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDI 266
K +A++LL N +EEK + +YN++I + K+G A++ ++M GI+ ++
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 267 VSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKV-RE 323
++Y SL+ G CK RM +A M E+K+ + Y LIDG+CK + ++ A + E
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE 679
Query: 324 LMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
L+E +GL P YNS++ G + A L +M + ++ D T TLI+ K G
Sbjct: 680 LLE-EGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDG 738
Query: 384 DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYS 443
+L A + +M GL PD Y +++G K + ++ M TP+ Y+
Sbjct: 739 NLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798
Query: 444 WIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
++ G+ ++ N+D L DE L KG+ D + + L+
Sbjct: 799 AVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 183/414 (44%), Gaps = 20/414 (4%)
Query: 131 WLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQD 190
W++IH S +R P +VL+S L+ D + ++++ R
Sbjct: 110 WVLIHILVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLV-DSAKSFGFEVNSR---- 164
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA 250
+N L++A SK R + A ++N+M E V+P N +S ++ EA
Sbjct: 165 -------AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDG 308
+ +M G++ D V+ L+ +E + EA + S + A P+ + Y+ +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 309 YCKANELDQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
CK +L A + RE+ E K P TY S++ + G + DA +L +EM +
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
+ + +LI + K DL SAL +KM + G P+ T+ LI F K E+E A E
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M G TPS I+ G+ K + L L DE GL + V ++ LCK
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQ 456
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA----SNVLEEMAK 537
+ + A +L ME GI + V Y ++ + + +A SN+LE+ K
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLK 510
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 194/391 (49%), Gaps = 9/391 (2%)
Query: 155 YQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVER 214
+ + P+ T +SSL K+ N W I L+++ L +N L+ ++ D+ R
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 215 AKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG------INLDIVS 268
L+ +M+E + PD+ T LI+ CK EAL + ++M + I D +
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH 372
Query: 269 YNSLIYGFCKEGRMREATRMFSEIK---DATPNHVTYTTLIDGYCKANELDQALKVRELM 325
+N+LI G CK GR++EA + +K PN VTY LIDGYC+A +L+ A +V M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 326 EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDL 385
+ + P V T N+I+ +C+ + A +M ++ V+ + +T TLI+A + ++
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
+ A+ + KMLE+G PD Y ALI G C++ A ++ + + GF+ +Y+ +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 446 VDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
+ +C K+N + + + + +G D+ Y LI K + E E++ M +G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 506 SGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
Y ++ AY G+ A + ++M
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 158/311 (50%), Gaps = 3/311 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N+ + L+ Y ++ + A +V +M+ ++KP++ ++ + + N+
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ ++GV N+ Y LIHAC +VE+A +M E G PD Y LIS C+
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTY 302
++A+ + +K++ G +LD+++YN LI FC + + M ++++ P+ +TY
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS- 361
TLI + K + + ++ E M GL P V TY +++ C G + +A KL +M
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
KV + + N LINA+SK+G+ AL K +M ++P+ TY AL + + E
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 422 SAKELLFGMLD 432
+ +L+ M++
Sbjct: 705 TLLKLMDEMVE 715
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 124/244 (50%), Gaps = 5/244 (2%)
Query: 124 VNSQVLSWLVIHYAKSRMT--QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
V V++++ + +A ++ + A+ +E+M P L+S L + +
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++ ++L + G L++ YN LI + E+ ++L +ME++G PD TYNTLIS +
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPN 298
K + ++M +G++ + +Y ++I +C G + EA ++F ++ PN
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
V Y LI+ + K QAL ++E M+ K + P V TYN++ + L + + KL++
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 359 EMSE 362
EM E
Sbjct: 712 EMVE 715
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 194/391 (49%), Gaps = 9/391 (2%)
Query: 155 YQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVER 214
+ + P+ T +SSL K+ N W I L+++ L +N L+ ++ D+ R
Sbjct: 253 HGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISR 312
Query: 215 AKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG------INLDIVS 268
L+ +M+E + PD+ T LI+ CK EAL + ++M + I D +
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH 372
Query: 269 YNSLIYGFCKEGRMREATRMFSEIK---DATPNHVTYTTLIDGYCKANELDQALKVRELM 325
+N+LI G CK GR++EA + +K PN VTY LIDGYC+A +L+ A +V M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 326 EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDL 385
+ + P V T N+I+ +C+ + A +M ++ V+ + +T TLI+A + ++
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
+ A+ + KMLE+G PD Y ALI G C++ A ++ + + GF+ +Y+ +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 446 VDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
+ +C K+N + + + + +G D+ Y LI K + E E++ M +G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 506 SGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
Y ++ AY G+ A + ++M
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 166/334 (49%), Gaps = 3/334 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N+ + L+ Y ++ + A +V +M+ ++KP++ ++ + + N+
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ ++GV N+ Y LIHAC +VE+A +M E G PD Y LIS C+
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTY 302
++A+ + +K++ G +LD+++YN LI FC + + M ++++ P+ +TY
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS- 361
TLI + K + + ++ E M GL P V TY +++ C G + +A KL +M
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
KV + + N LINA+SK+G+ AL K +M ++P+ TY AL + + E
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
+ +L+ M++ P+ + +++ D +
Sbjct: 705 TLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 136/273 (49%), Gaps = 5/273 (1%)
Query: 124 VNSQVLSWLVIHYAKSRMT--QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
V V++++ + +A ++ + A+ +E+M P L+S L + +
Sbjct: 472 VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI 531
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++ ++L + G L++ YN LI + E+ ++L +ME++G PD TYNTLIS +
Sbjct: 532 RVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPN 298
K + ++M +G++ + +Y ++I +C G + EA ++F ++ PN
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
V Y LI+ + K QAL ++E M+ K + P V TYN++ + L + + KL++
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
EM E+ + + IT L+ S +L KF
Sbjct: 712 EMVEQSCEPNQITMEILMERLSGSDELVKLRKF 744
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 225/481 (46%), Gaps = 41/481 (8%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+ K ++A+++F +M + P++ ++ L G + + +++V+ G+
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ Y+ L+ ++++ + A +L EM +KG P++ YN LI + + G +A+ I+D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE------------------------ 291
M +G++L +YN+LI G+CK G+ A R+ E
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 292 -------------IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYN 338
+++ +P TTLI G CK + +AL++ KG T N
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 339 SILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES 398
++L LC+ G++ +A ++ E+ + D ++ NTLI+ L A F ++M++
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 399 GLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAI 458
GLKPD +TY LI G M+++E A + G P +YS ++DG CK + +
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 459 LALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
DE +SK + + VY LIR C+ ++ A +L M+ GIS +S YTSL
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 519 YWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVERGLMSRN 578
+ A + EEM R + ++ ++ DG+G K+ QM + R + S+N
Sbjct: 690 MSIISRVEEAKLLFEEM--RMEGLEPNVFHYTALIDGYG--KLGQMVKVECLLREMHSKN 745
Query: 579 T 579
Sbjct: 746 V 746
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 208/434 (47%), Gaps = 8/434 (1%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQD----ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
D E+ + +S L+I ++ +D AL VF + + P C +LL+SL++
Sbjct: 183 DEEIRRK-MSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE 241
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ +V GV ++Y++ I+A K VE A +L ++MEE GV P++ T+NT
Sbjct: 242 FQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNT 300
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KD 294
+I G + EA ++KM G+ +++Y+ L+ G + R+ +A + E+ K
Sbjct: 301 VIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 360
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
PN + Y LID + +A L++A+++++LM +KGL +TYN++++ C++G+ +A
Sbjct: 361 FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
+LL EM + + ++I SAL+F +ML + P LI G
Sbjct: 421 RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
CK + A EL F L+ GF + + ++ G C+ +D + E L +G +D
Sbjct: 481 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
Y LI C ++++ A M G+ D+ Y+ L + K A ++
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 535 MAKRRLIITAKIYS 548
+ ++ YS
Sbjct: 601 CKRNGMLPDVYTYS 614
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 196/408 (48%), Gaps = 2/408 (0%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S LV +++ DA V ++M P++ L+ S ++ G+ N +I +V
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
G+ L YN LI K+ + A++LL EM G + ++ ++I L C M
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLID 307
AL +M ++ +LI G CK G+ +A ++ + K + T L+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
G C+A +LD+A ++++ + +G +YN+++ C ++ +A L+EM ++ ++
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
DN T + LI + ++ A++F + +G+ PD +TY +I G CK + E +E
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M+ P+ Y+ ++ YC+ + L L ++ KG+ +++ Y +LI+ + I
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
++E A+ LF M G+ + YT+L Y K G+ +L EM
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 2/300 (0%)
Query: 167 LLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKG 226
LL L + G + ++I K ++ G V++ YN LI C + ++ A L+EM ++G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 227 VVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREAT 286
+ PD +TY+ LI EA+ D +R G+ D+ +Y+ +I G CK R E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 287 RMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL 344
F E+ K+ PN V Y LI YC++ L AL++RE M+ KG+ P ATY S+++ +
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 345 CQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDP 404
R+ +A L EM + ++ + LI+ Y K+G + +M + P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 405 FTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDE 464
TY +I G+ + + A LL M + G P +Y + GY K+ V DE
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 187/406 (46%), Gaps = 10/406 (2%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACT----VLLSSLLKDGTTNV 179
+ S + L+ Y K+ +A ++ ++M + + T +L S L+ D
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
V ++ R + G L + + L S+ +E Q LN KG V D T N L+
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN----KGFVVDTRTSNALLH 513
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATP 297
C+ G EA IQ ++ G +D VSYN+LI G C + ++ EA E+ + P
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
++ TY+ LI G N++++A++ + + G+ P V TY+ ++ C+ R + +
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 358 NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
+EM K VQ + + N LI AY + G L AL+ + M G+ P+ TY +LI G +
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 418 DELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVY 477
+E AK L M G P+ Y+ ++DGY K + + L E SK + + Y
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 478 RALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
+I + + A +L M GI DS+ Y Y Y K G
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 181/361 (50%), Gaps = 6/361 (1%)
Query: 222 MEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGR 281
+ KG+ P T N L++ + + D + + G++ D+ + + I FCK G+
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGK 275
Query: 282 MREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNS 339
+ EA ++FS++++A PN VT+ T+IDG D+A +E M +G+ P + TY+
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
+++ L + RI DA +L EM++K + I N LI+++ + G L A++ K+ M+ G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAIL 459
L TY LI G+CK + ++A+ LL ML GF + S++ ++ C D+ L
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 460 ALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAY 519
E L + + + LI LCK + A +L++ G D+ +L +
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 520 WKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQ--MFWDHVVERGLMSR 577
++GK A + +E+ R ++ Y+ + G+ K+ + MF D +V+RGL
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTL-ISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 578 N 578
N
Sbjct: 575 N 575
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 136/279 (48%), Gaps = 18/279 (6%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A ++M LKP ++L+ L + ++G++ ++Y Y+ +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
C K+ E ++ +EM K V P+ YN LI YC+ G AL +++ M+ +GI+
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKV 321
+ +Y SLI G R+ EA +F E++ PN YT LIDGY K L Q +KV
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK---LGQMVKV 734
Query: 322 REL---MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
L M +K ++P TY ++ +DG + +A++LLNEM EK + D+IT I
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 379 YSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
Y K G + A K D Y A+I G+ K+
Sbjct: 795 YLKQGGVLEAFK----------GSDEENYAAIIEGWNKL 823
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 119 HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
H NS + L+ + ++A +FE+MR+ L+P++ T L+ K G
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
V + + + V N Y +I ++ +V A +LLNEM EKG+VPD TY I
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLI 273
Y K+G EA D+ I I +N LI
Sbjct: 793 YGYLKQGGVLEAFKGSDEENYAAI---IEGWNKLI 824
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 225/481 (46%), Gaps = 41/481 (8%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+ K ++A+++F +M + P++ ++ L G + + +++V+ G+
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ Y+ L+ ++++ + A +L EM +KG P++ YN LI + + G +A+ I+D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE------------------------ 291
M +G++L +YN+LI G+CK G+ A R+ E
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 292 -------------IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYN 338
+++ +P TTLI G CK + +AL++ KG T N
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 339 SILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES 398
++L LC+ G++ +A ++ E+ + D ++ NTLI+ L A F ++M++
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 399 GLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAI 458
GLKPD +TY LI G M+++E A + G P +YS ++DG CK + +
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Query: 459 LALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
DE +SK + + VY LIR C+ ++ A +L M+ GIS +S YTSL
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 519 YWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVERGLMSRN 578
+ A + EEM R + ++ ++ DG+G K+ QM + R + S+N
Sbjct: 690 MSIISRVEEAKLLFEEM--RMEGLEPNVFHYTALIDGYG--KLGQMVKVECLLREMHSKN 745
Query: 579 T 579
Sbjct: 746 V 746
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 208/434 (47%), Gaps = 8/434 (1%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQD----ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
D E+ + +S L+I ++ +D AL VF + + P C +LL+SL++
Sbjct: 183 DEEIRRK-MSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANE 241
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ +V GV ++Y++ I+A K VE A +L ++MEE GV P++ T+NT
Sbjct: 242 FQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNT 300
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KD 294
+I G + EA ++KM G+ +++Y+ L+ G + R+ +A + E+ K
Sbjct: 301 VIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 360
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
PN + Y LID + +A L++A+++++LM +KGL +TYN++++ C++G+ +A
Sbjct: 361 FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
+LL EM + + ++I SAL+F +ML + P LI G
Sbjct: 421 RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
CK + A EL F L+ GF + + ++ G C+ +D + E L +G +D
Sbjct: 481 CKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDR 540
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
Y LI C ++++ A M G+ D+ Y+ L + K A ++
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 535 MAKRRLIITAKIYS 548
+ ++ YS
Sbjct: 601 CKRNGMLPDVYTYS 614
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 196/408 (48%), Gaps = 2/408 (0%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S LV +++ DA V ++M P++ L+ S ++ G+ N +I +V
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
G+ L YN LI K+ + A++LL EM G + ++ ++I L C M
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLID 307
AL +M ++ +LI G CK G+ +A ++ + K + T L+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 513
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
G C+A +LD+A ++++ + +G +YN+++ C ++ +A L+EM ++ ++
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
DN T + LI + ++ A++F + +G+ PD +TY +I G CK + E +E
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M+ P+ Y+ ++ YC+ + L L ++ KG+ +++ Y +LI+ + I
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
++E A+ LF M G+ + YT+L Y K G+ +L EM
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 2/300 (0%)
Query: 167 LLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKG 226
LL L + G + ++I K ++ G V++ YN LI C + ++ A L+EM ++G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 227 VVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREAT 286
+ PD +TY+ LI EA+ D +R G+ D+ +Y+ +I G CK R E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 287 RMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL 344
F E+ K+ PN V Y LI YC++ L AL++RE M+ KG+ P ATY S+++ +
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 345 CQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDP 404
R+ +A L EM + ++ + LI+ Y K+G + +M + P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750
Query: 405 FTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDE 464
TY +I G+ + + A LL M + G P +Y + GY K+ V DE
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 187/406 (46%), Gaps = 10/406 (2%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACT----VLLSSLLKDGTTNV 179
+ S + L+ Y K+ +A ++ ++M + + T +L S L+ D
Sbjct: 398 LTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
V ++ R + G L + + L S+ +E Q LN KG V D T N L+
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN----KGFVVDTRTSNALLH 513
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATP 297
C+ G EA IQ ++ G +D VSYN+LI G C + ++ EA E+ + P
Sbjct: 514 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
++ TY+ LI G N++++A++ + + G+ P V TY+ ++ C+ R + +
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 358 NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
+EM K VQ + + N LI AY + G L AL+ + M G+ P+ TY +LI G +
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 418 DELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVY 477
+E AK L M G P+ Y+ ++DGY K + + L E SK + + Y
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 478 RALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
+I + + A +L M GI DS+ Y Y Y K G
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 181/361 (50%), Gaps = 6/361 (1%)
Query: 222 MEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGR 281
+ KG+ P T N L++ + + D + + G++ D+ + + I FCK G+
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGK 275
Query: 282 MREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNS 339
+ EA ++FS++++A PN VT+ T+IDG D+A +E M +G+ P + TY+
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
+++ L + RI DA +L EM++K + I N LI+++ + G L A++ K+ M+ G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAIL 459
L TY LI G+CK + ++A+ LL ML GF + S++ ++ C D+ L
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 460 ALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAY 519
E L + + + LI LCK + A +L++ G D+ +L +
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 520 WKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQ--MFWDHVVERGLMSR 577
++GK A + +E+ R ++ Y+ + G+ K+ + MF D +V+RGL
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTL-ISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 578 N 578
N
Sbjct: 575 N 575
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 136/279 (48%), Gaps = 18/279 (6%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A ++M LKP ++L+ L + ++G++ ++Y Y+ +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
C K+ E ++ +EM K V P+ YN LI YC+ G AL +++ M+ +GI+
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKV 321
+ +Y SLI G R+ EA +F E++ PN YT LIDGY K L Q +KV
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK---LGQMVKV 734
Query: 322 REL---MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
L M +K ++P TY ++ +DG + +A++LLNEM EK + D+IT I
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 379 YSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
Y K G + A K D Y A+I G+ K+
Sbjct: 795 YLKQGGVLEAFK----------GSDEENYAAIIEGWNKL 823
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 119 HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
H NS + L+ + ++A +FE+MR+ L+P++ T L+ K G
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
V + + + V N Y +I ++ +V A +LLNEM EKG+VPD TY I
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLI 273
Y K+G EA D+ I I +N LI
Sbjct: 793 YGYLKQGGVLEAFKGSDEENYAAI---IEGWNKLI 824
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/538 (24%), Positives = 230/538 (42%), Gaps = 81/538 (15%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
P N L+ + K A +F+ M ++P L A + L+ K G +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
K+ + + GV L++ +++ I KS D+ A + M +G+ P++ TY LI
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDATP--- 297
C+ G YEA + ++ + G+ IV+Y+SLI GFCK G +R ++ + IK P
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 298 ---------------------------------NHVTYTTLIDGYCKANELDQALKVREL 324
N V + +LIDG+C+ N D+ALKV L
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDAN------------------------------ 354
M G+ P VAT+ +++R +GR+ +A
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 355 -----KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
+L + M K+ AD CN +I+ K ++ A KF N ++E ++PD TY
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKG 469
+I G+C + L+ A+ + + F P+ + + ++ CK +++D + + KG
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 470 LCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVAS 529
+A Y L+ K IE + KLF M+ GIS V Y+ + K G+ A+
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 761
Query: 530 NVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQ-----MFWDHVVERGLMSRNTMRK 582
N+ + +L+ Y+ G KV + + ++H++ G+ + +++
Sbjct: 762 NIFHQAIDAKLLPDVVAYAILI----RGYCKVGRLVEAALLYEHMLRNGVKPDDLLQR 815
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 208/471 (44%), Gaps = 72/471 (15%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+H +++ V S + Y KS A V+++M + P++ T+L+ L +DG
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ ++ ++++ G+ +I Y+ LI K ++ L +M + G PD+ Y L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCK------------------- 278
+ K+G+ A+ KM + I L++V +NSLI G+C+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 279 ----------------EGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALK 320
EGR+ EA +F + P+ + Y TLID +CK + L+
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ +LM+ + +A N ++ L + RI DA+K N + E K++ D +T NT+I Y
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 381 KI-----------------------------------GDLKSALKFKNKMLESGLKPDPF 405
+ D+ A++ + M E G KP+
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
TY L+ F K ++E + +L M + G +PS SYS I+DG CK+ VD + +
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLA 516
+ L D Y LIR CK+ ++ A L+ HM NG+ D ++ +L+
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALS 818
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 236/542 (43%), Gaps = 65/542 (11%)
Query: 5 ENQRQFIDGVCAIIVKGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKWV 64
++ + G+ I +G++ L L + VLL L P+ + +F+W
Sbjct: 37 DSAKALAAGISKAIKEGNFNLLDSSVYGSNLQRNETNLVLLSLESE---PNSALKYFRWA 93
Query: 65 EST---PHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIA---HRDFXXXXXXXXXXXRI 118
E + P + + + +L + F A ++ D++ +DF
Sbjct: 94 EISGKDPSF-------YTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR------ 140
Query: 119 HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTV--LLSSLLKDGT 176
D +++ V +L+ + M AL++F + QL +P +V +L+SL+
Sbjct: 141 --DRSLDADVCKFLMECCCRYGMVDKALEIF--VYSTQLGVVIPQDSVYRMLNSLIGSDR 196
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+++ +L + G+ E GV F +
Sbjct: 197 VDLIADHFDKLCRGGI------------------------------EPSGVSAHGFVLD- 225
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD-- 294
+L+CK G +AL + G + IVS N ++ G + ++ A+R+ S + D
Sbjct: 226 --ALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCG 281
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
PN VT+ TLI+G+CK E+D+A + ++ME +G+ P + Y++++ + G + +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
KL ++ K V+ D + ++ I+ Y K GDL +A +ML G+ P+ TY LI G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
C+ + A + +L G PS +YS ++DG+CK N+ + AL ++ + G D
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
+Y L+ L K + A + M G I + V++ SL + + + A V
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 535 MA 536
M
Sbjct: 522 MG 523
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 128/283 (45%), Gaps = 8/283 (2%)
Query: 277 CKEGRMREATRMF---SEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP- 332
C+ G + +A +F +++ P Y L + ++ +D + + G+ P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPS 215
Query: 333 GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFK 392
GV+ + +L L G + A + E+ + ++CN ++ S + ++ A +
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLL 274
Query: 393 NKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKK 452
+ +L+ G P+ T+ LI+GFCK E++ A +L M G P +YS ++DGY K
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 453 DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
+ L + L KG+ LD V+ + I K + A ++ M GIS + V Y
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 513 TSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDG 555
T L + G+ A + ++ KR + + YS S+ DG
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS--SLIDG 435
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 177/344 (51%), Gaps = 3/344 (0%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
+I ++ L+ A +K + L +M+ G+ +++TY+ I+ +C++ AL+I
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKA 312
KM + G IV+ NSL+ GFC R+ EA + ++ + P+ VT+TTL+ G +
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
N+ +A+ + E M KG P + TY +++ LC+ G A LLN+M + K++AD +
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
NT+I+ K + A NKM G+KPD FTY LI C A LL ML+
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL-DASVYRALIRRLCKIEQIE 491
P ++ ++D + K+ + L DE + C D Y LI+ CK +++E
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
++F M G+ G++V YT+L + ++++ A V ++M
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 197/399 (49%), Gaps = 3/399 (0%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
S L+ AK + + EQM+ + +L ++ ++ + ++ I +++
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ G +I N L++ + A L+++M E G PD T+ TL+ +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLI 306
EA+++ ++M +G D+V+Y ++I G CK G A + ++++ + V Y T+I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
DG CK +D A + ME KG+ P V TYN ++ LC GR DA++LL++M EK +
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESG-LKPDPFTYKALIHGFCKMDELESAKE 425
D + N LI+A+ K G L A K ++M++S PD Y LI GFCK +E E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+ M G + +Y+ ++ G+ + + D + + +S G+ D Y L+ LC
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGK 524
+E A +F +M+ + D V YT++ A K+GK
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 184/374 (49%), Gaps = 3/374 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
+A+ + E+M + +P L +++ L K G ++ + ++ + + ++ IYN
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+I K + ++ A L N+ME KG+ PD+FTYN LIS C G +A + M +
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPNHVTYTTLIDGYCKANELDQA 318
IN D+V +N+LI F KEG++ EA +++ E+ K P+ V Y TLI G+CK +++
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 319 LKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
++V M +GL TY +++ Q +A + +M V D +T N L++
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 379 YSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPS 438
G++++AL M + +K D TY +I CK ++E +L + G P+
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 439 YCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFY 498
+Y+ ++ G+C+K + AL E G ++ Y LIR + + +L
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIK 555
Query: 499 HMEGNGISGDSVIY 512
M G +GD+ +
Sbjct: 556 EMRSCGFAGDASTF 569
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 202/410 (49%), Gaps = 3/410 (0%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
L+ L+ + +A+ + +QM +P T L+ L + + + +R+V
Sbjct: 148 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 207
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
G ++ Y +I+ K + + A LLN+ME+ + D+ YNT+I CK
Sbjct: 208 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLI 306
+A + +KME +GI D+ +YN LI C GR +A+R+ S++ K+ P+ V + LI
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 307 DGYCKANELDQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
D + K +L +A K+ E++++K +P V YN++++ C+ R+ + ++ EMS++ +
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ +T TLI+ + + D +A +M+ G+ PD TY L+ G C +E+A
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+ M +Y+ +++ CK V+ L KG+ + Y ++ C
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ E A+ LF M+ +G +S Y +L A + G + ++ +++EM
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 163/347 (46%), Gaps = 15/347 (4%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E + + + ++ K + DA +F +M +KP + L+S L G W
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR----WS 302
Query: 183 IHKRLVQDGVVLNI----YIYNCLIHACSKSRDVERAKQLLNEM-EEKGVVPDIFTYNTL 237
RL+ D + NI +N LI A K + A++L +EM + K PD+ YNTL
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDAT 296
I +CK E + + +M + G+ + V+Y +LI+GF + A +F + + D
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 297 -PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ +TY L+DG C ++ AL V E M+ + + + TY +++ LC+ G++ D
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
L +S K V+ + +T T+++ + + G + A +M E G P+ TY LI
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIV----DGYCKKDNVDAI 458
+ + ++ EL+ M GF ++ + DG K +D +
Sbjct: 543 RDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDML 589
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 130/276 (47%), Gaps = 2/276 (0%)
Query: 266 IVSYNSLIYGFCKEGRMREATRMFSEIKDATPNH--VTYTTLIDGYCKANELDQALKVRE 323
IV ++ L+ K + + ++++ +H TY+ I+ +C+ ++L AL +
Sbjct: 75 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILG 134
Query: 324 LMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
M G P + T NS+L C RI +A L+++M E Q D +T TL++ +
Sbjct: 135 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 194
Query: 384 DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYS 443
A+ +M+ G +PD TY A+I+G CK E + A LL M Y+
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254
Query: 444 WIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGN 503
I+DG CK ++D L ++ +KG+ D Y LI LC + A +L M
Sbjct: 255 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314
Query: 504 GISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
I+ D V + +L A+ K GK A + +EM K +
Sbjct: 315 NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 126/262 (48%), Gaps = 2/262 (0%)
Query: 281 RMREATRMFSEIKDATP--NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYN 338
++ +A +F ++ + P + V ++ L+ K N+ D + + E M+ G+ + TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 339 SILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES 398
+ C+ ++ A +L +M + +T N+L+N + + A+ ++M+E
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 399 GLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAI 458
G +PD T+ L+HG + ++ A L+ M+ G P +Y +++G CK+ D
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 459 LALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
L L ++ + D +Y +I LCK + ++ A LF ME GI D Y L
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 519 YWKSGKTSVASNVLEEMAKRRL 540
G+ S AS +L +M ++ +
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNI 316
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 2/214 (0%)
Query: 342 RKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK 401
RK+ QD ++ DA L +M + + + + L++A +K+ + +M G+
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL 461
+ +TY I+ FC+ +L A +L M+ G+ PS + + +++G+C + + +AL
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 462 PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWK 521
D+ + G D + L+ L + + A L M G D V Y ++ K
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 522 SGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDG 555
G+ +A N+L +M K ++ IY+ ++ DG
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYN--TIIDG 259
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 203/418 (48%), Gaps = 37/418 (8%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
DA+ +F M + P + LLS+++K +VV + K++ G+ ++Y +N +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
I+ V A +L +M + G PD T +L++ +C++ +A+S+ DKM G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANE------ 314
DIV+YN++I CK R+ +A F EI K PN VTYT L++G C ++
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 315 --------------------LDQALKVRELMEAKGLY---------PGVATYNSILRKLC 345
LD +K +++EAK L+ P + TY+S++ LC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
RI +AN++ + M K AD ++ NTLIN + K ++ +K +M + GL +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
TY LI GF + +++ A+E M G +P +Y+ ++ G C ++ L + ++
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
+ + LD Y +IR +CK ++E A LF + G+ D V YT++ G
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 190/379 (50%), Gaps = 2/379 (0%)
Query: 172 LKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDI 231
L+D N + +V+ +I +N L+ A K + + L +ME G+ D+
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 232 FTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE 291
+T+N +I+ +C ALSI KM + G D V+ SL+ GFC+ R+ +A + +
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 292 IKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGR 349
+ + P+ V Y +ID CK ++ A + +E KG+ P V TY +++ LC R
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 350 IRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
DA +LL++M +KK+ + IT + L++A+ K G + A + +M+ + PD TY +
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKG 469
LI+G C D ++ A ++ M+ G SY+ +++G+CK V+ + L E +G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 470 LCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVAS 529
L + Y LI+ + ++ A++ F M+ GIS D Y L +G+ A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 530 NVLEEMAKRRLIITAKIYS 548
+ E+M KR + + Y+
Sbjct: 421 VIFEDMQKREMDLDIVTYT 439
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 183/363 (50%), Gaps = 2/363 (0%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
AL + +M +P L++ + + + ++V+ G +I YN +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
+ K++ V A E+E KG+ P++ TY L++ C +A + M ++ I
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVR 322
++++Y++L+ F K G++ EA +F E+ + P+ VTY++LI+G C + +D+A ++
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
+LM +KG V +YN+++ C+ R+ D KL EMS++ + ++ +T NTLI + +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSY 442
GD+ A +F ++M G+ PD +TY L+ G C ELE A + M +Y
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 443 SWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEG 502
+ ++ G CK V+ +L KGL D Y ++ LC + E L+ M+
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 503 NGI 505
G+
Sbjct: 499 EGL 501
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 171/350 (48%), Gaps = 2/350 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E + + LV + + DA+ + ++M KP + A ++ SL K N +
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
K + + G+ N+ Y L++ S A +LL++M +K + P++ TY+ L+ +
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
K G EA + ++M R I+ DIV+Y+SLI G C R+ EA +MF + K + V
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
+Y TLI+G+CKA ++ +K+ M +GL TYN++++ Q G + A + ++M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ D T N L+ G+L+ AL M + + D TY +I G CK ++
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
E A L + G P +Y+ ++ G C K + + AL + +GL
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 156/308 (50%), Gaps = 2/308 (0%)
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
K++ DA F+++ ++P++ T L++ L + ++ +++ + N+
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
Y+ L+ A K+ V AK+L EM + PDI TY++LI+ C EA + D M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANEL 315
+G D+VSYN+LI GFCK R+ + ++F E+ + N VTY TLI G+ +A ++
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
D+A + M+ G+ P + TYN +L LC +G + A + +M ++++ D +T T+
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
I K G ++ A + GLKPD TY ++ G C L + L M G
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 436 TPSYCSYS 443
+ C+ S
Sbjct: 502 MKNDCTLS 509
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 145/289 (50%), Gaps = 12/289 (4%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S L+ + K+ +A ++FE+M + P + + L++ L + ++ +V
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
G + ++ YN LI+ K++ VE +L EM ++G+V + TYNTLI + + G +
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLID 307
A +M+ GI+ DI +YN L+ G C G + +A +F ++ ++ + VTYTT+I
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
G CK ++++A + + KGL P + TY +++ LC G + + L +M ++ +
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
++ T + GD+ + + KML G P K + G CK
Sbjct: 504 NDCTLSD--------GDITLSAELIKKMLSCGYAPSLL--KDIKSGVCK 542
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 189/384 (49%), Gaps = 6/384 (1%)
Query: 171 LLKDGTTNVVWK----IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKG 226
+L++G N+ + + R+V + +I + L+ +K + L +M+ G
Sbjct: 54 ILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG 113
Query: 227 VVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREAT 286
+ P + T N ++ C A KM + G D+V++ SL+ G+C R+ +A
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI 173
Query: 287 RMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL 344
+F +I PN VTYTTLI CK L+ A+++ M G P V TYN+++ L
Sbjct: 174 ALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 345 CQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDP 404
C+ GR DA LL +M +++++ + IT LI+A+ K+G L A + N M++ + PD
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 405 FTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDE 464
FTY +LI+G C L+ A+++ + M G P+ Y+ ++ G+CK V+ + + E
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
Query: 465 FLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGK 524
KG+ + Y LI+ C + + + A+++F M D Y L +GK
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413
Query: 525 TSVASNVLEEMAKRRLIITAKIYS 548
A + E M KR + I Y+
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYT 437
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 204/432 (47%), Gaps = 2/432 (0%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+H P + + L+ AK + +FEQM++ + P L C +++ +
Sbjct: 75 VHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQP 134
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
++++ G ++ + L++ +E A L +++ G P++ TY TL
Sbjct: 135 CRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTL 194
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDA 295
I CK A+ + ++M G ++V+YN+L+ G C+ GR +A + ++ +
Sbjct: 195 IRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
PN +T+T LID + K +L +A ++ +M +YP V TY S++ LC G + +A +
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
+ M + + TLI+ + K ++ +K +M + G+ + TY LI G+C
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
+ + A+E+ M P +Y+ ++DG C V+ L + + + + ++
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
Y +I+ +CK+ ++E A LF + G+ + + YT++ + + G A ++ ++M
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Query: 536 AKRRLIITAKIY 547
+ + +Y
Sbjct: 495 KEDGFLPNESVY 506
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 167/338 (49%), Gaps = 2/338 (0%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
+DA+ +F+Q+ KP++ T L+ L K+ N ++ ++ +G N+ YN L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
+ + A LL +M ++ + P++ T+ LI + K G EA + + M + +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMF--SEIKDATPNHVTYTTLIDGYCKANELDQALK 320
D+ +Y SLI G C G + EA +MF E PN V YTTLI G+CK+ ++ +K
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ M KG+ TY +++ C GR A ++ N+MS ++ D T N L++
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
G ++ AL M + + + TY +I G CK+ ++E A +L + G P+
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
+Y+ ++ G+C++ + +L + G + SVY+
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%)
Query: 335 ATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNK 394
++Y ILR + + DA L M + I L++ +K+ + +
Sbjct: 49 SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 395 MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDN 454
M G+ P T ++H C + A L M+ GF P +++ +++GYC +
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 455 VDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTS 514
++ +AL D+ L G + Y LIR LCK + A +LF M NG + V Y +
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 515 LAYAYWKSGKTSVASNVLEEMAKRRL 540
L + G+ A+ +L +M KRR+
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRI 254
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 194/409 (47%), Gaps = 10/409 (2%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ + K DA +V ++MR P +++ SL G ++ K+ +L+ D
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ Y LI A V+ A +L++EM +G+ PD+FTYNT+I CK+GM A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREA----TRMFSEIKDATPNHVTYTTLID 307
+ +E +G D++SYN L+ +G+ E T+MFSE D PN VTY+ LI
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD--PNVVTYSILIT 341
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
C+ ++++A+ + +LM+ KGL P +Y+ ++ C++GR+ A + L M
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
D + NT++ K G AL+ K+ E G P+ +Y + + A ++
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M+ G P +Y+ ++ C++ VD L + S Y ++ CK
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSL----AYAYWKSGKTSVASNVL 532
+IE A + M GNG + YT L +A +++ +A++++
Sbjct: 522 HRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 184/362 (50%), Gaps = 5/362 (1%)
Query: 178 NVVWKIH--KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
N + +H + +V+ G ++ + LI R++ +A +++ E+ EK PD+F YN
Sbjct: 104 NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYN 162
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--K 293
LI+ +CK +A + D+M + + D V+YN +I C G++ A ++ +++
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 294 DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
+ P +TYT LI+ +D+ALK+ + M ++GL P + TYN+I+R +C++G + A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 354 NKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHG 413
+++ + K + D I+ N L+ A G + K KM P+ TY LI
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 414 FCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLD 473
C+ ++E A LL M + G TP SY ++ +C++ +D + + +S G D
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 474 ASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLE 533
Y ++ LCK + + A ++F + G S +S Y ++ A W SG A +++
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 534 EM 535
EM
Sbjct: 463 EM 464
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 179/394 (45%), Gaps = 3/394 (0%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
++L + E M P + CT L+ ++ + L + G +++ YN LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-DVFAYNALI 165
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
+ K ++ A ++L+ M K PD TYN +I C +G AL + +++ +
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKV 321
+++Y LI EG + EA ++ E+ + P+ TY T+I G CK +D+A ++
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+E KG P V +YN +LR L G+ + KL+ +M +K + +T + LI +
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
G ++ A+ M E GL PD ++Y LI FC+ L+ A E L M+ G P +
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 442 YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
Y+ ++ CK D L + + G ++S Y + L A + M
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 502 GNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
NGI D + Y S+ + G A +L +M
Sbjct: 466 SNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 123/273 (45%), Gaps = 3/273 (1%)
Query: 277 CKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGV 334
C+ G E+ + + K P+ + T LI G+ + +A++V E++E G P V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 335 ATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNK 394
YN+++ C+ RI DA ++L+ M K D +T N +I + G L ALK N+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 395 MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDN 454
+L +P TY LI ++ A +L+ ML G P +Y+ I+ G CK+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 455 VDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTS 514
VD + KG D Y L+R L + E EKL M + V Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 515 LAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
L + GK A N+L+ M ++ L A Y
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 122/242 (50%), Gaps = 4/242 (1%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
DP V S L+ + ++A+ + + M+ L P + L+++ ++G +V
Sbjct: 330 DPNV--VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
+ + ++ DG + +I YN ++ K+ ++A ++ ++ E G P+ +YNT+ S
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PN 298
G AL + +M GI+ D ++YNS+I C+EG + EA + +++ P+
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
VTY ++ G+CKA+ ++ A+ V E M G P TY ++ + G +A +L N
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 567
Query: 359 EM 360
++
Sbjct: 568 DL 569
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 1/239 (0%)
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
C++ ++L + E M KG P V +++ I A +++ E+ EK Q D
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
N LIN + K+ + A + ++M PD TY +I C +L+ A ++L
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
+L P+ +Y+ +++ + VD L L DE LS+GL D Y +IR +CK
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 490 IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
++ A ++ ++E G D + Y L A GK ++ +M + YS
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 216/463 (46%), Gaps = 38/463 (8%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
++S + + L++ + + +DAL+VF+ M + P+ + ++L+ L + G +
Sbjct: 228 LDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG 287
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ ++ + G + Y LI A +++A L +EM +G P++ TY LI C
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHV 300
+ G EA + KM ++ I +++YN+LI G+CK+GR+ A + + E + PN
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
T+ L++G C+ + +A+ + + M GL P + +YN ++ LC++G + A KLL+ M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ ++ D +T +INA+ K G A F ML G+ D T LI G CK+ +
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 421 ESAKELL-------------------------------FGMLDA----GFTPSYCSYSWI 445
A +L ML G PS +Y+ +
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 446 VDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
VDG + ++ + + G + Y +I LC+ ++E AEKL M+ +G+
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 506 SGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
S + V YT + Y +GK A + M +R + +IYS
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYS 690
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 189/379 (49%), Gaps = 37/379 (9%)
Query: 141 MTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYN 200
+ A +F++M KP++ TVL+ L +DG + +++V+D + ++ YN
Sbjct: 316 LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 201 CLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMERE 260
LI+ K V A +LL ME++ P++ T+N L+ C+ G Y+A+ + +M
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 261 GINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQA 318
G++ DIVSYN LI G C+EG M A ++ S + D P+ +T+T +I+ +CK + D A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 319 LKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA-------------------NKLLNE 359
LM KG+ T +++ +C+ G+ RDA N +L+
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 360 MSEK-KVQAD---------------NITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD 403
+S+ KV+ + +T TL++ + GD+ + + M SG P+
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 404 PFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPD 463
+ Y +I+G C+ +E A++LL M D+G +P++ +Y+ +V GY +D L
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Query: 464 EFLSKGLCLDASVYRALIR 482
+ +G L+ +Y +L++
Sbjct: 676 AMVERGYELNDRIYSSLLQ 694
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 164/324 (50%), Gaps = 3/324 (0%)
Query: 167 LLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM-EEK 225
++++L K+G T ++++ G VL+ +I L+ + ++ A ++ + M +E
Sbjct: 201 IVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEV 260
Query: 226 GVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREA 285
P+ +Y+ LI C+ G EA ++D+M +G +Y LI C G + +A
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKA 320
Query: 286 TRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRK 343
+F E+ + PN TYT LIDG C+ ++++A V M ++P V TYN+++
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 344 LCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD 403
C+DGR+ A +LL M ++ + + T N L+ ++G A+ +ML++GL PD
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 404 PFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPD 463
+Y LI G C+ + +A +LL M P +++ I++ +CK+ D A
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLG 500
Query: 464 EFLSKGLCLDASVYRALIRRLCKI 487
L KG+ LD LI +CK+
Sbjct: 501 LMLRKGISLDEVTGTTLIDGVCKV 524
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 166/351 (47%), Gaps = 3/351 (0%)
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA 250
G LN Y+ L+ + +K A ME G V + Y T+++ CK G A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI-KDAT--PNHVTYTTLID 307
K+ + G LD SL+ GFC+ +R+A ++F + K+ T PN V+Y+ LI
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
G C+ L++A +++ M KG P TY +++ LC G I A L +EM + +
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKP 334
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
+ T LI+ + G ++ A KM++ + P TY ALI+G+CK + A ELL
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M P+ +++ +++G C+ + L L GL D Y LI LC+
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
+ A KL M I D + +T++ A+ K GK VAS L M ++
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRK 505
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 149/320 (46%), Gaps = 37/320 (11%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y K A ++ M KP++ L+ L + G + KR++ +G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ +I YN LI + + A +LL+ M + PD T+ +I+ +CK+G A
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREA---------TRMFS------------ 290
+ M R+GI+LD V+ +LI G CK G+ R+A R+ +
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556
Query: 291 ----EIKDA------------TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGV 334
++K+ P+ VTYTTL+DG ++ ++ + ++ ELM+ G P V
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 335 ATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNK 394
Y I+ LCQ GR+ +A KLL+ M + V +++T ++ Y G L AL+
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 395 MLESGLKPDPFTYKALIHGF 414
M+E G + + Y +L+ GF
Sbjct: 677 MVERGYELNDRIYSSLLQGF 696
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 153/324 (47%), Gaps = 23/324 (7%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
T L+ + K G T I + LV+ ++ + N ++ SK V+ +L ++ +
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
G+VP + TY TL+ + G + I + M+ G ++ Y +I G C+ GR+ E
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 285 ATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A ++ S ++D+ +PNHVTYT ++ GY +LD+AL+ M +G Y+S+L+
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694
Query: 343 K--LCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF--------- 391
L Q G +++++ ++ + I N LI+ ++G S L
Sbjct: 695 GFVLSQKGIDNSEESTVSDIALRETDPECI--NELISVVEQLGGCISGLCIFLVTRLCKE 752
Query: 392 -----KNKMLESGLKPDPFTYKAL---IHGFCKMDELESAKELLFGMLDAGFTPSYCSYS 443
N ++++ L+ F KA+ + +C + EL+ +L +GF PS+ S+
Sbjct: 753 GRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFC 812
Query: 444 WIVDGYCKKDNVDAILALPDEFLS 467
++ G K+ + + L E L+
Sbjct: 813 LVIQGLKKEGDAERARELVMELLT 836
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 141/321 (43%), Gaps = 28/321 (8%)
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
RI P + +L L +K ++ L + ++ L P + T L+ L++ G
Sbjct: 541 RILTTPHSLNVILDML----SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
++I + + G + N+Y Y +I+ + VE A++LL+ M++ GV P+ TY
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGR----MREATRMFSEI 292
++ Y G AL M G L+ Y+SL+ GF + E+T +
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIAL 716
Query: 293 KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
++ P + NEL ++ + G G+ + ++ +LC++GR +
Sbjct: 717 RETDPECI------------NELISVVE-----QLGGCISGLCIF--LVTRLCKEGRTDE 757
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
+N L+ + E+ V + + ++ +Y ++ +L+SG P ++ +I
Sbjct: 758 SNDLVQNVLERGVFLEKAM-DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQ 816
Query: 413 GFCKMDELESAKELLFGMLDA 433
G K + E A+EL+ +L +
Sbjct: 817 GLKKEGDAERARELVMELLTS 837
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 13/233 (5%)
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN-----ITCNTLIN 377
EL E G Y+S+L L + D L ++ ++++AD I T++N
Sbjct: 149 ELREVFGFRLNYPCYSSLLMSLAK----LDLG-FLAYVTYRRMEADGFVVGMIDYRTIVN 203
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT- 436
A K G ++A F +K+L+ G D +L+ GFC+ L A ++ F ++ T
Sbjct: 204 ALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKV-FDVMSKEVTC 262
Query: 437 -PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEK 495
P+ SYS ++ G C+ ++ L D+ KG Y LI+ LC I+ A
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 496 LFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
LF M G + YT L + GK A+ V +M K R+ + Y+
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 211/455 (46%), Gaps = 38/455 (8%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT-NVVWKIHKRLVQD 190
L+ +A S ++A+ VF++M KP L V+L+ K GT N + + +++ D
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 191 GVVLNIYIYNCLIHAC-----------------------------------SKSRDVERA 215
G+ + Y YN LI C KS + A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 216 KQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYG 275
++LNEM G P I TYN+LIS Y + GM EA+ ++++M +G D+ +Y +L+ G
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 276 FCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPG 333
F + G++ A +F E+++A PN T+ I Y + + +K+ + + GL P
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
+ T+N++L Q+G + + + EM + T NTLI+AYS+ G + A+
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
+ML++G+ PD TY ++ + E ++++L M D P+ +Y ++ Y
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGK 573
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
+ + +L +E S + A + + L+ K + + AE+ F ++ G S D
Sbjct: 574 EIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN 633
Query: 514 SLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
S+ Y + + A+ VL+ M +R + Y+
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 197/417 (47%), Gaps = 2/417 (0%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
Y KS ++A++V +M L P + L+S+ +DG + ++ ++ + G +
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
++ Y L+ ++ VE A + EM G P+I T+N I +Y +G E + I D
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKAN 313
++ G++ DIV++N+L+ F + G E + +F E+K A P T+ TLI Y +
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
+QA+ V M G+ P ++TYN++L L + G + K+L EM + + + + +T
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
+L++AY+ ++ ++ ++P K L+ K D L A+ + +
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
GF+P + + +V Y ++ V + D +G + Y +L+ + +
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
E++ + GI D + Y ++ YAY ++ + AS + EM ++ Y+ F
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 222/458 (48%), Gaps = 43/458 (9%)
Query: 120 DDPE-VNSQVLSWL--VIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
D PE +S++L++L + + K + A F + + YQ +++S L K+G
Sbjct: 129 DKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGR 188
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ + L +DG L++Y Y LI A + S A + +MEE G P + TYN
Sbjct: 189 VSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNV 248
Query: 237 LISLYCKKGMHYEAL-SIQDKMEREGINLDIVSYNSLIYGFCKEGRM-REATRMFSEIKD 294
+++++ K G + + S+ +KM+ +GI D +YN+LI CK G + +EA ++F E+K
Sbjct: 249 ILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKA 307
Query: 295 A--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
A + + VTY L+D Y K++ +A+KV M G P + TYNS++ +DG + +
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDE 367
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
A +L N+M+EK + D T TL++ + + G ++SA+ +M +G KP+ T+ A I
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 413 ------GFCKM----DELE---------SAKELL--FG--------------MLDAGFTP 437
F +M DE+ + LL FG M AGF P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
+++ ++ Y + + + + + L G+ D S Y ++ L + E +EK+
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 498 YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
ME + + Y SL +AY + + ++ EE+
Sbjct: 548 AEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 175/403 (43%), Gaps = 38/403 (9%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ + ++ + A+ +FE+MR KP++ + G + KI + G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ +I +N L+ ++ + EM+ G VP+ T+NTLIS Y + G +A+
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGY 309
++ +M G+ D+ +YN+++ + G ++ ++ +E++D PN +TY +L+ Y
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 310 CKANE-----------------------------------LDQALKVRELMEAKGLYPGV 334
E L +A + ++ +G P +
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 335 ATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNK 394
T NS++ + + AN +L+ M E+ T N+L+ +S+ D + + +
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 395 MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDN 454
+L G+KPD +Y +I+ +C+ + A + M ++G P +Y+ + Y
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Query: 455 VDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
+ + + + G + + Y +++ CK+ + + A KLF
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA-KLF 791
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 165/340 (48%), Gaps = 39/340 (11%)
Query: 124 VNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
++ +++W L+ + ++ M + VF++M+ P L+S+ + G+
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+++R++ GV ++ YN ++ A ++ E+++++L EME+ P+ TY +L+ Y
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 242 CKKG----MHY-------------------------------EALSIQDKMEREGINLDI 266
MH EA +++ G + DI
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 267 VSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVREL 324
+ NS++ + + + +A + +K+ TP+ TY +L+ + ++ + ++ ++
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGD 384
+ AKG+ P + +YN+++ C++ R+RDA+++ +EM + D IT NT I +Y+
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Query: 385 LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
+ A+ M++ G +P+ TY +++ G+CK++ + AK
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
P++ + L+ +V Y + +M A V + M+ P + L+ +
Sbjct: 627 PDITT--LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+I + ++ G+ +I YN +I+A ++ + A ++ +EM G+VPD+ TYNT I Y
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPN 298
M EA+ + M + G + +YNS++ G+CK R EA ++++ P+
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPH 801
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 173/334 (51%), Gaps = 5/334 (1%)
Query: 218 LLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFC 277
L ++ME G+ D++++ LI +C+ AL++ KM + G IV+ SL+ GFC
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 278 KEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVA 335
+ R +EA + + PN V Y T+I+G CK +L+ AL+V ME KG+
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
TYN+++ L GR DA +LL +M ++K+ + I LI+ + K G+L A +M
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
+ + P+ FTY +LI+GFC L AK + M+ G P +Y+ ++ G+CK V
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+ + L E +GL DA Y LI C+ ++ A+K+F M G+S D V Y L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRL---IITAKI 546
+GK A ++E++ K + IIT I
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 206/442 (46%), Gaps = 39/442 (8%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
DA +F +M + P + T +L+ + K ++V ++ ++ G+ ++Y + LI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 204 HA------------------------------------CSKSRDVERAKQLLNEMEEKGV 227
H C +R + A L++ M+ G
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR-FQEAVSLVDSMDGFGF 180
Query: 228 VPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATR 287
VP++ YNT+I+ CK AL + ME++GI D V+YN+LI G GR +A R
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 288 MFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
+ ++ + PN + +T LID + K L +A + + M + + P V TYNS++ C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
G + DA + + M K D +T NTLI + K ++ +K +M GL D F
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
TY LIHG+C+ +L A+++ M+D G +P +Y+ ++D C ++ L + ++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKT 525
+ +D Y +I+ LC+ ++++ A LF + G+ D++ Y ++ + G
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 526 SVASNVLEEMAKRRLIITAKIY 547
A + M + + + +IY
Sbjct: 481 READKLCRRMKEDGFMPSERIY 502
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 160/316 (50%), Gaps = 2/316 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N + + ++ K+R +AL+VF M ++ L+S L G ++
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ +V+ + N+ + LI K ++ A+ L EM + VVP++FTYN+LI+ +C
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTY 302
G +A + D M +G D+V+YN+LI GFCK R+ + ++F E+ + + TY
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
TLI GYC+A +L+ A KV M G+ P + TYN +L LC +G+I A ++ ++ +
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
++ D IT N +I + LK A + G+KPD Y +I G C+
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 482
Query: 423 AKELLFGMLDAGFTPS 438
A +L M + GF PS
Sbjct: 483 ADKLCRRMKEDGFMPS 498
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 163/326 (50%), Gaps = 2/326 (0%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
L L+ + + Q+A+ + + M + P++ +++ L K+ N ++ +
Sbjct: 152 LGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 211
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ G+ + YN LI S S A +LL +M ++ + P++ + LI + K+G
Sbjct: 212 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLI 306
EA ++ +M R + ++ +YNSLI GFC G + +A MF + K P+ VTY TLI
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
G+CK+ ++ +K+ M +GL TYN+++ CQ G++ A K+ N M + V
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
D +T N L++ G ++ AL + +S + D TY +I G C+ D+L+ A L
Sbjct: 392 PDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKK 452
+ G P +Y ++ G C+K
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRK 477
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
DA +F+ M P + L++ K K+ + G+V + + YN LI
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
H ++ + A+++ N M + GV PDI TYN L+ C G +AL + + +++ ++
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKV 321
+DI++YN +I G C+ +++EA +F + K P+ + Y T+I G C+ +A K+
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 322 RELMEAKGLYPGVATYNSILR 342
M+ G P Y+ LR
Sbjct: 487 CRRMKEDGFMPSERIYDETLR 507
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 143/568 (25%), Positives = 245/568 (43%), Gaps = 51/568 (8%)
Query: 54 PSISFPFFKWVESTPHYTHSLQCSWAMIQI---LAKYKHFKTAQQML-DKIAHRDFXXXX 109
P FF+W +++ +I + L + F A+ +L I D
Sbjct: 55 PETLVSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSL 114
Query: 110 XXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLS 169
+H P + + + Y ALQ+F++M +LKP+L C LL
Sbjct: 115 CNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLI 174
Query: 170 SLLKDGTT---NVVWKIHKRLVQDGVVLNIYIYNCLIH---------------------- 204
L++ ++ + ++ +V+ GV LN+ +N L++
Sbjct: 175 GLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEF 234
Query: 205 --------------ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA 250
A SK + K+LL +M++ G+VP+ TYN L+ YCK G EA
Sbjct: 235 KVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA 294
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDG 308
I + M++ + D+ +YN LI G C G MRE + +K P+ VTY TLIDG
Sbjct: 295 FQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG 354
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE-KKVQA 367
+ +A K+ E ME G+ T+N L+ LC++ + + + E+ +
Sbjct: 355 CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSP 414
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
D +T +TLI AY K+GDL AL+ +M + G+K + T ++ CK +L+ A LL
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
GF +Y ++ G+ +++ V+ L + DE + S + +LI LC
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHH 534
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
+ E A + F + +G+ D + S+ Y K G+ A E K Y
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF--KPDNY 592
Query: 548 SCFSVPDG---HGENKVSQMFWDHVVER 572
+C + +G G + + F++ ++E
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFNTLIEE 620
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 214/467 (45%), Gaps = 42/467 (8%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
+N Q + LV Y +DAL + E+M +++ P +L ++ K G + + +
Sbjct: 202 LNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKE 261
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ + ++G+V N YN L++ K ++ A Q++ M++ V+PD+ TYN LI+ C
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLC 321
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYG--------------------------- 275
G E L + D M+ + D+V+YN+LI G
Sbjct: 322 NAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQV 381
Query: 276 --------FCKEGRMREATRMFSEIKDA---TPNHVTYTTLIDGYCKANELDQALKVREL 324
CKE + TR E+ D +P+ VTY TLI Y K +L AL++
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGD 384
M KG+ T N+IL LC++ ++ +A+ LLN ++ D +T TLI + +
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 385 LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW 444
++ AL+ ++M + + P T+ +LI G C + E A E + ++G P +++
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 445 IVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM-EGN 503
I+ GYCK+ V+ +E + D L+ LCK E A F + E
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 504 GISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
+ D+V Y ++ A+ K K A ++L EM ++ L Y+ F
Sbjct: 622 EV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 180/363 (49%), Gaps = 4/363 (1%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
++ L++ + M+ +L+P + L+ + G + K+ +++ DGV N +N
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNIS 386
Query: 203 IHACSKSRDVERAKQLLNEM-EEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+ K E + + E+ + G PDI TY+TLI Y K G AL + +M ++G
Sbjct: 387 LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG 446
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
I ++ ++ N+++ CKE ++ EA + + + + VTY TLI G+ + ++++AL
Sbjct: 447 IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKAL 506
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
++ + M+ + P V+T+NS++ LC G+ A + +E++E + D+ T N++I Y
Sbjct: 507 EMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGY 566
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
K G ++ A +F N+ ++ KPD +T L++G CK E A F L
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNF-FNTLIEEREVDT 625
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+Y+ ++ +CK + L E KGL D Y + I L + ++ ++L
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Query: 500 MEG 502
G
Sbjct: 686 FSG 688
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 150/301 (49%), Gaps = 6/301 (1%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
L WL + +T+ +V E + ++ P + L+ + LK G + ++ + +
Sbjct: 387 LKWLCKEEKREAVTR---KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
Q G+ +N N ++ A K R ++ A LLN ++G + D TY TLI + ++
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLI 306
+AL + D+M++ I + ++NSLI G C G+ A F E+ ++ P+ T+ ++I
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
GYCK +++A + P T N +L LC++G A N + E++ +
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-E 622
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
D +T NT+I+A+ K LK A ++M E GL+PD FTY + I + +L EL
Sbjct: 623 VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682
Query: 427 L 427
L
Sbjct: 683 L 683
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 44/272 (16%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK----DGTTNVVWKIHKRL 187
L+ Y K AL++ +M +K + +L +L K D N++ HKR
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR- 480
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
G +++ Y LI + VE+A ++ +EM++ + P + T+N+LI C G
Sbjct: 481 ---GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE---------------- 291
A+ D++ G+ D ++NS+I G+CKEGR+ +A ++E
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 292 --------------------IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLY 331
I++ + VTY T+I +CK +L +A + ME KGL
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLE 657
Query: 332 PGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
P TYNS + L +DG++ + ++LL + S K
Sbjct: 658 PDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 126/261 (48%), Gaps = 34/261 (13%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
V+ L++ + + + AL+++++M+ ++ P + L+ L G T + +
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
L + G++ + +N +I K VE+A + NE + PD +T N L++ CK
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603
Query: 244 KGMHYEALSIQDKM--EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNH 299
+GM +AL+ + + ERE +D V+YN++I FCK+ +++EA + SE+ K P+
Sbjct: 604 EGMTEKALNFFNTLIEERE---VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 300 VTYTTLI-----DGYCKANELDQALKV---------RELMEAKGLYPGVA---------- 335
TY + I DG K +E D+ LK R+L P +
Sbjct: 661 FTYNSFISLLMEDG--KLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEA 718
Query: 336 -TYNSILRKLCQDGRIRDANK 355
Y+ ++ +LC GR+++ ++
Sbjct: 719 IAYSDVIDELCSRGRLKEHSR 739
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 29/196 (14%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+ DD NS +++ Y K + A + + + + KP C +LL+ L K+G T
Sbjct: 553 LPDDSTFNS-----IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
L+++ V + YN +I A K + ++ A LL+EMEEKG+ PD FTYN+
Sbjct: 608 EKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Query: 238 ISLYCKKGMHYEALSIQDKME-----------------------REGINLDIVSYNSLIY 274
ISL + G E + K +E +N + ++Y+ +I
Sbjct: 667 ISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVID 726
Query: 275 GFCKEGRMREATRMFS 290
C GR++E +R ++
Sbjct: 727 ELCSRGRLKEHSRSYT 742
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 241/499 (48%), Gaps = 30/499 (6%)
Query: 56 ISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXX 115
++ FFK + ++ + H+ MI+ LA + Q +L ++ + F
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGF---------- 107
Query: 116 XRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
H ++ V+S Y + + + A+++F +++ + P + +L +LL +
Sbjct: 108 ---HCSEDLFISVISV----YRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGEN 160
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
+++ +++ + +DG N++ YN L+ A K+ V+ AK+LL EM KG PD +Y
Sbjct: 161 RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYT 220
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVS-YNSLIYGFCKEGRMREATRMFSEI-- 292
T+IS C+ G+ E + ++ E +VS YN+LI G CKE + A + E+
Sbjct: 221 TVISSMCEVGLVKEGRELAERFE------PVVSVYNALINGLCKEHDYKGAFELMREMVE 274
Query: 293 KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
K +PN ++Y+TLI+ C + +++ A M +G +P + T +S+++ G D
Sbjct: 275 KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD 334
Query: 353 ANKLLNEMSEK-KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI 411
A L N+M +Q + + NTL+ + G++ A+ + M E G P+ TY +LI
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 412 HGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC 471
+GF K L+ A + ML +G P+ Y+ +V+ C+ +L E +SK C
Sbjct: 395 NGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI-EIMSKENC 453
Query: 472 LDA-SVYRALIRRLCKIEQIECAEKLFYHME-GNGISGDSVIYTSLAYAYWKSGKTSVAS 529
+ + A I+ LC +++ AEK+F ME + + V Y L K+ + A
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 530 NVLEEMAKRRLIITAKIYS 548
+ E+ R + ++ Y+
Sbjct: 514 GLTREIFMRGVEWSSSTYN 532
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 188/409 (45%), Gaps = 10/409 (2%)
Query: 156 QLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERA 215
+ +P + L++ L K+ +++ + +V+ G+ N+ Y+ LI+ S +E A
Sbjct: 241 RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300
Query: 216 KQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMERE-GINLDIVSYNSLIY 274
L +M ++G P+I+T ++L+ +G ++AL + ++M R G+ ++V+YN+L+
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ 360
Query: 275 GFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP 332
GFC G + +A +FS +++ +PN TY +LI+G+ K LD A+ + M G P
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420
Query: 333 GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK-F 391
V Y +++ LC+ + ++A L+ MS++ T N I G L A K F
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 392 KNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK 451
+ + P+ TY L+ G K + +E A L + G S +Y+ ++ G C
Sbjct: 481 RQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540
Query: 452 KDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL--FYHMEGNGISGDS 509
L L + + G D +I CK + E A ++ D
Sbjct: 541 AGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDV 600
Query: 510 VIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS----CFSVPD 554
+ YT++ + +S +LE M ++ + +S CF + D
Sbjct: 601 ISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDD 649
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 8/323 (2%)
Query: 142 TQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYN 200
T DAL ++ QM R + L+P++ A L+ G + + + G NI Y
Sbjct: 332 TFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391
Query: 201 CLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMERE 260
LI+ +K ++ A + N+M G P++ Y ++ C+ EA S+ + M +E
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Query: 261 GINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD---ATPNHVTYTTLIDGYCKANELDQ 317
+ ++N+ I G C GR+ A ++F +++ PN VTY L+DG KAN +++
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
A + + +G+ +TYN++L C G A +L+ +M D IT N +I
Sbjct: 512 AYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIIL 571
Query: 378 AYSKIGDLKSALKFKNKMLESG---LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
AY K G + A + + ++ G +PD +Y +I G C+ + E LL M+ AG
Sbjct: 572 AYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAG 630
Query: 435 FTPSYCSYSWIVDGYCKKDNVDA 457
PS ++S +++ + D V A
Sbjct: 631 IVPSIATWSVLINCFILDDIVRA 653
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 193/413 (46%), Gaps = 15/413 (3%)
Query: 145 ALQVFEQMRLYQLKPHLP-ACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
AL F+ + L H P V++ L DG + V + +++ G + ++ +I
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
+ ERA ++ ++E G P + YN ++ + + M+R+G
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKV 321
++ +YN L+ CK ++ A ++ E+ K P+ V+YTT+I C+ + + ++
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
E E P V+ YN+++ LC++ + A +L+ EM EK + + I+ +TLIN
Sbjct: 239 AERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHG-FCK---MDELESAKELLFGMLDAGFTP 437
G ++ A F +ML+ G P+ +T +L+ G F + D L+ +++ G G P
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF---GLQP 350
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
+ +Y+ +V G+C N+ +++ G + Y +LI K ++ A ++
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 498 YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
M +G + V+YT++ A + K A +++E M+K + ++ F
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 463
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 168/359 (46%), Gaps = 8/359 (2%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S L+ S + A QM P++ + L+ GTT + ++++
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 190 D-GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
G+ N+ YN L+ ++ +A + + MEE G P+I TY +LI+ + K+G
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLI 306
A+ I +KM G ++V Y +++ C+ + +EA + + ++ P+ T+ I
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464
Query: 307 DGYCKANELDQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
G C A LD A KV R++ + P + TYN +L L + RI +A L E+ + V
Sbjct: 465 KGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ + T NTL++ G AL+ KM+ G PD T +I +CK + E A +
Sbjct: 525 EWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQ 584
Query: 426 LLFGMLDAG---FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
+L ++ G + P SY+ ++ G C+ + + + L + +S G+ + + LI
Sbjct: 585 ML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 205/415 (49%), Gaps = 9/415 (2%)
Query: 130 SWLVIH--YAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKR 186
S++V+ Y K+ + A+ +F +M ++ K + + +L+ ++ +G + + +
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 187 LVQDGVVLNI----YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+V + +NI +N +I A K R V+RA ++ M E+ +PD +TY TL+ C
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHV 300
K+ EA+ + D+M+ EG + V YN LI G CK+G + T++ +K PN V
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TY TLI G C +LD+A+ + E M + P TY +++ L + R DA +LL+ M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
E+ + + LI+ K G + A+ KM E G KP+ Y L+ G C+ +
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
AKE+L M+ +G P+ +YS ++ G+ K + + + E G + Y L
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
I LC + +++ A ++ M GI D+V Y+S+ G A + EM
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 190/422 (45%), Gaps = 6/422 (1%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N + ++ K R A++VF M + P L+ L K+ + +
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ +G + IYN LI K D+ R +L++ M KG VP+ TYNTLI C K
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTY 302
G +A+S+ ++M + V+Y +LI G K+ R +A R+ S +++ N Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+ LI G K + ++A+ + M KG P + Y+ ++ LC++G+ +A ++LN M
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
+ T ++L+ + K G + A++ +M ++G + F Y LI G C + ++
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSK---GLCLDASVYRA 479
A + ML G P +YS I+ G C ++DA L L E L + D Y
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVI-YTSLAYAYWKSGKTSVASNVLEEMAKR 538
L+ LC + I A L M G D + T L KS + LEE+ R
Sbjct: 546 LLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Query: 539 RL 540
L
Sbjct: 606 LL 607
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 197/419 (47%), Gaps = 14/419 (3%)
Query: 167 LLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM-EEK 225
++ S G + V K+ R+ + V+ + + A K+ ++A L + M +E
Sbjct: 83 MIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEF 142
Query: 226 GVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDI----VSYNSLIYGFCKEGR 281
+ ++N+++++ +G+++ L D + +N++I +S+N +I CK
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRF 202
Query: 282 MREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNS 339
+ A +F + + P+ TY TL+DG CK +D+A+ + + M+++G P YN
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
++ LC+ G + KL++ M K + +T NTLI+ G L A+ +M+ S
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAIL 459
P+ TY LI+G K A LL M + G+ + YS ++ G K+ + +
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 460 ALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAY 519
+L + KG + VY L+ LC+ + A+++ M +G ++ Y+SL +
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 520 WKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPD----GHGENKVSQMFWDHVVERGL 574
+K+G A V +EM K ++ C+SV G G K + M W ++ G+
Sbjct: 443 FKTGLCEEAVQVWKEMDKTG---CSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 21/306 (6%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
+N + S L+ K ++A+ ++ +M KP++ +VL+ L ++G N +I
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEI 419
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
R++ G + N Y Y+ L+ K+ E A Q+ EM++ G + F Y+ LI C
Sbjct: 420 LNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCG 479
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI-----KDATPN 298
G EA+ + KM GI D V+Y+S+I G C G M A +++ E+ + P+
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK-LL 357
VTY L+DG C ++ +A+ + M +G P V T N+ L L + D + L
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFL 599
Query: 358 NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
E+ + ++ ++ A ML L P T+ ++ CK
Sbjct: 600 EELVVRLLKRQRVS---------------GACTIVEVMLGKYLAPKTSTWAMIVREICKP 644
Query: 418 DELESA 423
++ +A
Sbjct: 645 KKINAA 650
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/544 (25%), Positives = 240/544 (44%), Gaps = 19/544 (3%)
Query: 5 ENQRQFIDGVCAIIVKGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKWV 64
E + +C + + W L + +++ L++ I +VL + P ++ F+ WV
Sbjct: 27 EPEDILFSALCLNLRQRRWNTLHQFSSS--LTNPLISRVLREFR---SSPKLALEFYNWV 81
Query: 65 ---ESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDD 121
+ + + S MI +L + F A ++ + + I
Sbjct: 82 LRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSY 141
Query: 122 PEVNSQ--VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
S V LV ++ Q A +V EQ R + A + LL +
Sbjct: 142 QACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDR 201
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
WK++K + G V N+ +N +I++ K + A + M + GV P++ ++N +I
Sbjct: 202 FWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMID 261
Query: 240 LYCKKGMHYEALSIQDKMEREGINL---DIVSYNSLIYGFCKEGRMREATRMFSEI--KD 294
CK G AL + KM N + V+YNS+I GFCK GR+ A R+ ++
Sbjct: 262 GACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSG 321
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
N TY L+D Y +A D+AL++ + M +KGL YNSI+ L +G I A
Sbjct: 322 VDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAM 381
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
+L +M+ K +Q D T ++ + G +K A++F+ ++ E L D + L+H F
Sbjct: 382 SVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHF 441
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
+ +L A ++L ML G + S+ ++DGY K+ ++ L + D + +
Sbjct: 442 VRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNL 501
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
+Y +++ L K AE + ME D V Y +L K+G A ++L +
Sbjct: 502 VIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSK 557
Query: 535 MAKR 538
M K+
Sbjct: 558 MQKQ 561
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 166/327 (50%), Gaps = 8/327 (2%)
Query: 167 LLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKG 226
L+ + + G+++ ++ + G+V+N IYN +++ D+E A +L +M K
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKN 391
Query: 227 VVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREAT 286
+ D FT ++ C+ G EA+ Q ++ + + DIV +N+L++ F ++ ++ A
Sbjct: 392 MQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACAD 451
Query: 287 RMFSE--IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL 344
++ ++ + + +++ TLIDGY K +L++AL++ + M + YNSI+ L
Sbjct: 452 QILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGL 511
Query: 345 CQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML-ESGLKPD 403
+ G A ++N M K D +T NTL+N K G+++ A +KM + G K
Sbjct: 512 SKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSV 567
Query: 404 PF-TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALP 462
T+ +I+ CK E AKE+L M++ G P +Y ++ + K + + ++ L
Sbjct: 568 SLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELH 627
Query: 463 DEFLSKGLCLDASVYRALIRRLCKIEQ 489
D + +G+ +Y +++R L E
Sbjct: 628 DYLILQGVTPHEHIYLSIVRPLLDREN 654
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 162/318 (50%), Gaps = 6/318 (1%)
Query: 222 MEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGR 281
M E G PD+ T+ TL++ C +G +AL++ D+M EG Y ++I G CK G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 282 MREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNS 339
A + S++++ + V Y +ID CK A + M KG++P V TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
++ C+ GR DA +LL +M E+++ D +T + LINA K G + A + ML G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAIL 459
+ P TY ++I GFCK D L AK +L M +P ++S +++GYCK VD +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 460 ALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAY 519
+ E +G+ + Y LI C++ ++ A+ L M +G++ + + + S+ +
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 520 WKSGKTSVASNVLEEMAK 537
+ A +LE++ K
Sbjct: 297 CSKKELRKAFAILEDLQK 314
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 153/271 (56%), Gaps = 5/271 (1%)
Query: 160 HLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLL 219
H P T++ + L K G T + ++ + + ++ IYN +I K A+ L
Sbjct: 41 HQPYGTII-NGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLF 99
Query: 220 NEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS-IQDKMEREGINLDIVSYNSLIYGFCK 278
EM +KG+ PD+ TY+ +I +C+ G +A ++D +ER+ IN D+V++++LI K
Sbjct: 100 TEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ-INPDVVTFSALINALVK 158
Query: 279 EGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVAT 336
EG++ EA ++ ++ + P +TY ++IDG+CK + L+ A ++ + M +K P V T
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Query: 337 YNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML 396
+++++ C+ R+ + ++ EM + + A+ +T TLI+ + ++GDL +A N M+
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Query: 397 ESGLKPDPFTYKALIHGFCKMDELESAKELL 427
SG+ P+ T+++++ C EL A +L
Sbjct: 279 SSGVAPNYITFQSMLASLCSKKELRKAFAIL 309
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 134/254 (52%), Gaps = 10/254 (3%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG----TTNVVWKIHKRLVQDGVVLNIY 197
T+ AL + +M +K H+ ++ L KDG N+ ++H + G+ ++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK----GIFPDVI 112
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
Y+ +I + +S A+QLL +M E+ + PD+ T++ LI+ K+G EA I M
Sbjct: 113 TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDM 172
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANEL 315
R GI ++YNS+I GFCK+ R+ +A RM + K +P+ VT++TLI+GYCKA +
Sbjct: 173 LRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
D +++ M +G+ TY +++ CQ G + A LLN M V + IT ++
Sbjct: 233 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSM 292
Query: 376 INAYSKIGDLKSAL 389
+ + +L+ A
Sbjct: 293 LASLCSKKELRKAF 306
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 107/203 (52%), Gaps = 3/203 (1%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S ++ + +S DA Q+ M Q+ P + + L+++L+K+G + +I+ +++
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
G+ YN +I K + AK++L+ M K PD+ T++TLI+ YCK
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLID 307
+ I +M R GI + V+Y +LI+GFC+ G + A + + + PN++T+ +++
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 308 GYCKANELDQALKVRE-LMEAKG 329
C EL +A + E L +++G
Sbjct: 295 SLCSKKELRKAFAILEDLQKSEG 317
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 207/471 (43%), Gaps = 54/471 (11%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A V+ +M P+L +L+ L K G T+ K+ + G+ N Y LI
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
+ + A++L EM+ G PD +N L+ +CK G EA + E++G L
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVR 322
+ Y+SLI G + R +A +++ + K+ P+ + YT LI G KA +++ ALK+
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
M +KG+ P YN++++ LC G + + L EMSE + D T LI + +
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM------------ 430
G ++ A + ++ +SG P T+ ALI G CK EL+ A+ LL M
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 431 ---------------------------LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPD 463
D G +P SY+ +++G+C+ ++D L L +
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 464 EFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
KGL D+ Y LI L ++ + E A KLFY + +Y SL +
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFY--AKDDFRHSPAVYRSLMTWSCRKR 599
Query: 524 KTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVERGL 574
K VA N+ + K+ SC D N++ Q F + ER L
Sbjct: 600 KVLVAFNLWMKYLKK--------ISCL---DDETANEIEQCFKEGETERAL 639
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 181/403 (44%), Gaps = 41/403 (10%)
Query: 166 VLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEK 225
+++ L +D ++ W+ + L GV ++ Y + LI A +K E+A + M+E
Sbjct: 97 LVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEF 156
Query: 226 GVVPDIFTYNTLI---------------------------SLYC---------KKGMHYE 249
PD+FTYN ++ +LY KKG +
Sbjct: 157 DCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSD 216
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLID 307
A + D M GI+ + V+Y LI G C+ G +A ++F E++ + P+ V + L+D
Sbjct: 217 AQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLD 276
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
G+CK + +A ++ L E G G+ Y+S++ L + R A +L M +K ++
Sbjct: 277 GFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP 336
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
D I LI SK G ++ ALK + M G+ PD + Y A+I C LE + L
Sbjct: 337 DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQ 396
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M + P C+++ ++ C+ V + E G + + ALI LCK
Sbjct: 397 LEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASN 530
+++ A L + ME + + ++ L+++ +S T V S
Sbjct: 457 GELKEARLLLHKME---VGRPASLFLRLSHSGNRSFDTMVESG 496
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 165/371 (44%), Gaps = 43/371 (11%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
DA ++F +M+ P A LL K G +++ + +DG VL + Y+ LI
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
++R +A +L M +K + PDI Y LI K G +AL + M +GI+
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKV 321
D YN++I C G + E + E+ ++ P+ T+T LI C+ + +A ++
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM--------------------- 360
+E G P VAT+N+++ LC+ G +++A LL++M
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFD 490
Query: 361 ------------------SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
++ D ++ N LIN + + GD+ ALK N + GL P
Sbjct: 491 TMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSP 550
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALP 462
D TY LI+G ++ E A +L + D +P+ Y ++ C+K V L
Sbjct: 551 DSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRKVLVAFNLW 608
Query: 463 DEFLSKGLCLD 473
++L K CLD
Sbjct: 609 MKYLKKISCLD 619
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 193/463 (41%), Gaps = 88/463 (19%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S L+ ++R A +++ M +KP + T+L+ L K G K+ +
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
G+ + Y YN +I A +E + L EM E PD T+ LI C+ G+ E
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK---------------- 293
A I ++E+ G + + ++N+LI G CK G ++EA + +++
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 294 -------------------------DATPNHVTYTTLIDGYCKANELDQALKVRELMEAK 328
++P+ V+Y LI+G+C+A ++D ALK+ +++ K
Sbjct: 487 RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLK 546
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE-------------------------- 362
GL P TYN+++ L + GR +A KL +
Sbjct: 547 GLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFN 606
Query: 363 ------KKVQA-DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFT---YKALIH 412
KK+ D+ T N + + K G+ + AL+ +++E + D T Y +
Sbjct: 607 LWMKYLKKISCLDDETANEIEQCF-KEGETERALR---RLIELDTRKDELTLGPYTIWLI 662
Query: 413 GFCKMDELESAKELLFGMLDAG---FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKG 469
G C+ A ++F +L TP C ++ G CK++ +DA + + L
Sbjct: 663 GLCQSGRFHEAL-MVFSVLREKKILVTPPSCVK--LIHGLCKREQLDAAIEVFLYTLDNN 719
Query: 470 LCLDASVYRALIRRLCK-IEQIECAEKLFYHMEGNGISGDSVI 511
L V L+ L + E++E +L ME G + DS++
Sbjct: 720 FKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERAGYNVDSML 762
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 1/238 (0%)
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI-RDANKLLNEM 360
+ LI Y K ++A++ M+ P V TYN ILR + ++ A + NEM
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEM 189
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ + T L++ K G A K + M G+ P+ TY LI G C+
Sbjct: 190 LKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSA 249
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+ A++L + M +G P +++ ++DG+CK + L F G L Y +L
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
I L + + A +L+ +M I D ++YT L K+GK A +L M +
Sbjct: 310 IDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK 367
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/545 (25%), Positives = 236/545 (43%), Gaps = 66/545 (12%)
Query: 54 PSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXX 113
P I++ FF W YTH+L+C +++ +LA K + + +I +F
Sbjct: 132 PDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEF-------- 183
Query: 114 XXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK 173
+ + L+ + K M ++ L V+ +M+ ++P L L++ L+
Sbjct: 184 ---------PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVS 234
Query: 174 DGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFT 233
+ ++ + + + +I YN +I K+ ++A + L +ME +G D T
Sbjct: 235 AMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKIT 294
Query: 234 YNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI- 292
Y T+I +++ +M+ +GI + +++ +I G CKEG++ E +F +
Sbjct: 295 YMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMI 354
Query: 293 -KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIR 351
K + PN YT LIDGY K+ ++ A+++ M +G P V TY+ ++ LC++GR+
Sbjct: 355 RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 352 -----------------------------------DANKLLNEMSEKKVQADNITCNTLI 376
+A +L EMSEK D+ N LI
Sbjct: 415 EALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALI 474
Query: 377 NAYSKIGDLKSALK-FKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
+A++K + A+ FK E G +TY L+ G K E A +L M+D G
Sbjct: 475 DAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGI 534
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEK 495
TP+ + + G C V + DE G+ LDA+ +I LCK +I+ A K
Sbjct: 535 TPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACK 593
Query: 496 LFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVL--------EEMA--KRRLIITAK 545
L + G I T + A K GK +A ++ E M KRR+ T
Sbjct: 594 LADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTL 653
Query: 546 IYSCF 550
+ +CF
Sbjct: 654 LETCF 658
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 188/433 (43%), Gaps = 41/433 (9%)
Query: 194 LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
+ + N LI + K VE + +M+E G+ P ++TYN L++ A +
Sbjct: 185 MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV 244
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVTYTTLIDGYCK 311
+ ME I DIV+YN++I G+CK G+ ++A E + + +TY T+I
Sbjct: 245 FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYA 304
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
++ + + + M+ KG+ ++ ++ LC++G++ + + M K + +
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
LI+ Y+K G ++ A++ ++M++ G KPD TY +++G CK +E A +
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
G + YS ++DG K VD L +E KG D+ Y ALI K +++
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 492 CAEKLFYHME------------------------------------GNGISGDSVIYTSL 515
A LF ME GI+ + + +L
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVERGLM 575
+ SGK + A +L+E+A +I+ A + G K + D + ERG
Sbjct: 545 STGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERG-- 602
Query: 576 SRNTMRKIQQMLI 588
R +I+ ++I
Sbjct: 603 -REVPGRIRTVMI 614
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 190/377 (50%), Gaps = 18/377 (4%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
+ A V +M P + +L+ L + + + + + + G+V ++Y Y +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
+ + K+ +E+A++ NEM E G P++ TY LI Y K A + + M EG
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDAT---------------PNHVTYTT 304
+IV+Y++LI G CK G++ +A ++F + KD PN VTY
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
L+DG+CK++ +++A K+ + M +G P Y++++ LC+ G++ +A ++ EMSE
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
A T ++LI+ Y K+ A K +KMLE+ P+ Y +I G CK+ + + A
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 425 ELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
+L+ M + G P+ +Y+ ++DG+ ++ L L + SKG+ + YR LI
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 485 CKIEQIECAEKLFYHME 501
CK ++ A L M+
Sbjct: 825 CKNGALDVAHNLLEEMK 841
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 186/385 (48%), Gaps = 18/385 (4%)
Query: 171 LLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPD 230
L G + + + ++ G + + Y+ +++ + +E A L EM+ G+V D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
++TY ++ +CK G+ +A ++M G ++V+Y +LI+ + K ++ A +F
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 291 EI--KDATPNHVTYTTLIDGYCKANELDQALKVRELM----------------EAKGLYP 332
+ + PN VTY+ LIDG+CKA ++++A ++ E M + P
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 333 GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFK 392
V TY ++L C+ R+ +A KLL+ MS + + + I + LI+ K+G L A + K
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 393 NKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKK 452
+M E G +TY +LI + K+ + A ++L ML+ P+ Y+ ++DG CK
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 453 DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
D L KG + Y A+I I +IE +L M G++ + V Y
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 513 TSLAYAYWKSGKTSVASNVLEEMAK 537
L K+G VA N+LEEM +
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 214/474 (45%), Gaps = 57/474 (12%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
D S+VL++L S+M + A +FE+M+ L + T+++ S K G
Sbjct: 482 DTSTYSKVLNYLC---NASKM-ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
K + + G N+ Y LIHA K++ V A +L M +G +P+I TY+ LI
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 241 YCKKGMHYEALSIQDKM--EREGINLD--------------IVSYNSLIYGFCKEGRMRE 284
+CK G +A I ++M ++ ++D +V+Y +L+ GFCK R+ E
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 285 ATRMFS--EIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A ++ ++ PN + Y LIDG CK +LD+A +V+ M G + TY+S++
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
+ + R A+K+L++M E + + +I+ K+G A K M E G +P
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD------ 456
+ TY A+I GF + ++E+ ELL M G P+Y +Y ++D CK +D
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 837
Query: 457 -----------------AILALPDEFLSKGLCLDA----------SVYRALIRRLCKIEQ 489
I EF+ LD SVYR LI L K ++
Sbjct: 838 EEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQR 897
Query: 490 IECAEKLFYHME--GNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
+E A +L + + S Y SL + + K A + EM K+ +I
Sbjct: 898 LEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 194/406 (47%), Gaps = 27/406 (6%)
Query: 160 HLPACTV---LLSSLLKDGTT------NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSR 210
H+P V L+ S+ D + ++ K + ++ GVVLN + +
Sbjct: 403 HMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAG 462
Query: 211 DVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYN 270
E+A ++ EM +G +PD TY+ +++ C A + ++M+R G+ D+ +Y
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 271 SLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAK 328
++ FCK G + +A + F+E+++ TPN VTYT LI Y KA ++ A ++ E M ++
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK---------VQADN-------ITC 372
G P + TY++++ C+ G++ A ++ M K Q D+ +T
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
L++ + K ++ A K + M G +P+ Y ALI G CK+ +L+ A+E+ M +
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
GF + +YS ++D Y K D + + L + +Y +I LCK+ + +
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
A KL ME G + V YT++ + GK +LE M +
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 201/441 (45%), Gaps = 24/441 (5%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ ++ + ++A+ +MR P++ + LL L ++ ++ +G
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC--KKGMHYE 249
+ I+N L+HA S D A +LL +M + G +P YN LI C K ++ +
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427
Query: 250 ALSIQDKMERE----GINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYT 303
L + +K E G+ L+ ++ +S C G+ +A + E+ + P+ TY+
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 304 TLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
+++ C A++++ A + E M+ GL V TY ++ C+ G I A K NEM E
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
+ +T LI+AY K + A + ML G P+ TY ALI G CK ++E A
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 424 KELLFGML----------------DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
++ M D P+ +Y ++DG+CK V+ L D
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 468 KGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSV 527
+G + VY ALI LCK+ +++ A+++ M +G Y+SL Y+K + +
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 528 ASNVLEEMAKRRLIITAKIYS 548
AS VL +M + IY+
Sbjct: 728 ASKVLSKMLENSCAPNVVIYT 748
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 178/408 (43%), Gaps = 24/408 (5%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
T L+S L + R+ + N+ Y+ L+ C + + R K++LN M
Sbjct: 306 TKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMM 365
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGR--- 281
+G P +N+L+ YC G H A + KM + G V YN LI C +
Sbjct: 366 EGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425
Query: 282 ---MREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVAT 336
+ A + +SE+ A N + ++ C A + ++A V M +G P +T
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485
Query: 337 YNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML 396
Y+ +L LC ++ A L EM + AD T +++++ K G ++ A K+ N+M
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 397 ESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
E G P+ TY ALIH + K ++ A EL ML G P+ +YS ++DG+CK V+
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 457 AILAL----------PD------EFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM 500
+ PD ++ + Y AL+ CK ++E A KL M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 501 EGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
G + ++Y +L K GK A V EM++ T YS
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 205/511 (40%), Gaps = 65/511 (12%)
Query: 54 PSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXX 113
PS FF W Y H+ A++ ++ + K ++ L +I RD
Sbjct: 145 PSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQI--RD--------- 193
Query: 114 XXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK 173
DD EV + L+ LV + ++ AL+ +++ ++ +P
Sbjct: 194 ------DDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRST---------- 237
Query: 174 DGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFT 233
YNCLI A K+ ++ A + EM + D FT
Sbjct: 238 -------------------------YNCLIQAFLKADRLDSASLIHREMSLANLRMDGFT 272
Query: 234 YNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK 293
CK G EAL++ +E E D V Y LI G C+ EA + ++
Sbjct: 273 LRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR 329
Query: 294 DAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIR 351
+ PN VTY+TL+ G +L + +V +M +G YP +NS++ C G
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389
Query: 352 DANKLLNEMSEKKVQADNITCNTLINAYSKIGD------LKSALKFKNKMLESGLKPDPF 405
A KLL +M + + N LI + D L A K ++ML +G+ +
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
+ C + E A ++ M+ GF P +YS +++ C ++ L +E
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKT 525
GL D Y ++ CK IE A K F M G + + V YT+L +AY K+ K
Sbjct: 510 KRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKV 569
Query: 526 SVASNVLEEMAKRRLIITAKIYSCFSVPDGH 556
S A+ + E M + YS ++ DGH
Sbjct: 570 SYANELFETMLSEGCLPNIVTYS--ALIDGH 598
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 37/274 (13%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S L+ Y K + A +V +M P++ T ++ L K G T+ +K+ + + +
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
G N+ Y +I +E +LL M KGV P+ TY LI CK G
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 832
Query: 250 ALSIQDKMER--------------EGINLDIVS-------------------YNSLIYGF 276
A ++ ++M++ EG N + + Y LI
Sbjct: 833 AHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892
Query: 277 CKEGRMREATRMFSEIKDATPNHV----TYTTLIDGYCKANELDQALKVRELMEAKGLYP 332
K R+ A R+ E+ + V TY +LI+ C AN+++ A ++ M KG+ P
Sbjct: 893 IKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP 952
Query: 333 GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
+ ++ S+++ L ++ +I +A LL+ +S ++Q
Sbjct: 953 EMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 175/352 (49%), Gaps = 2/352 (0%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
++ L+ A +K E L +E G+ D++++ TLI +C+ ALS KM
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELD 316
+ G IV++ SL+ GFC R EA + +I PN V Y T+ID C+ +++
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
AL V + M+ G+ P V TYNS++ +L G + ++L++M + D IT + LI
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
+ Y K G L A K N+M++ + P+ TY +LI+G C L+ AK++L ++ GF
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
P+ +Y+ +++GYCK VD + + G+ D Y L + C+ + AEK+
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV 381
Query: 497 FYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
M G+ D + L GK A LE++ K + ++ Y+
Sbjct: 382 LGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYN 433
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 187/389 (48%), Gaps = 2/389 (0%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLV 188
S L+I AK + + +F + + + L + T L+ + ++ +++
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ G +I + L++ A L++++ G P++ YNT+I C+KG
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLI 306
AL + M++ GI D+V+YNSLI G + R+ S++ +P+ +T++ LI
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
D Y K +L +A K M + + P + TYNS++ LC G + +A K+LN + K
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
+ +T NTLIN Y K + +K M G+ D FTY L G+C+ + +A+++
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV 381
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
L M+ G P +++ ++DG C + L ++ + Y +I+ LCK
Sbjct: 382 LGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441
Query: 487 IEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+++E A LF + G+S D + Y ++
Sbjct: 442 ADKVEDAWYLFCSLALKGVSPDVITYITM 470
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 158/309 (51%), Gaps = 2/309 (0%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
N+ IYN +I + + V A +L M++ G+ PD+ TYN+LI+ G + I
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKA 312
M R GI+ D++++++LI + KEG++ EA + ++E+ + PN VTY +LI+G C
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
LD+A KV ++ +KG +P TYN+++ C+ R+ D K+L MS V D T
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
NTL Y + G +A K +M+ G+ PD +T+ L+ G C ++ A L +
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
+ +Y+ I+ G CK D V+ L KG+ D Y ++ L +
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWRE 482
Query: 493 AEKLFYHME 501
A +L+ M+
Sbjct: 483 AHELYRKMQ 491
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 13/356 (3%)
Query: 215 AKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIY 274
A L +M E +P I ++ L+ K + +S+ +E GI+ D+ S+ +LI
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 275 GFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP 332
FC+ R+ A ++ P+ VT+ +L++G+C N +A+ + + + G P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 333 GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFK 392
V YN+I+ LC+ G++ A +L M + ++ D +T N+LI G + +
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 393 NKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKK 452
+ M+ G+ PD T+ ALI + K +L AK+ M+ P+ +Y+ +++G C
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIH 302
Query: 453 DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
+D + + +SKG +A Y LI CK ++++ K+ M +G+ GD+ Y
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Query: 513 TSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMFWDH 568
+L Y ++GK S A VL M SC PD + N + DH
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMV-----------SCGVHPDMYTFNILLDGLCDH 407
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 148/306 (48%), Gaps = 2/306 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E N + + ++ + AL V + M+ ++P + L++ L GT V +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
I +++ G+ ++ ++ LI K + AK+ NEM ++ V P+I TYN+LI+ C
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI-KDATP-NHV 300
G+ EA + + + +G + V+YN+LI G+CK R+ + ++ + +D +
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TY TL GYC+A + A KV M + G++P + T+N +L LC G+I A L ++
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ K IT N +I K ++ A + G+ PD TY ++ G +
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480
Query: 421 ESAKEL 426
A EL
Sbjct: 481 REAHEL 486
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 123/249 (49%), Gaps = 4/249 (1%)
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
R+ P+V + S L+ Y K +A + + +M + P++ L++ L G
Sbjct: 247 RMGISPDVIT--FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL 304
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ K+ LV G N YN LI+ K++ V+ ++L M GV D FTYNT
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT 296
L YC+ G A + +M G++ D+ ++N L+ G C G++ +A +++ +
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 297 P--NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
+TY +I G CKA++++ A + + KG+ P V TY +++ L + R+A+
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAH 484
Query: 355 KLLNEMSEK 363
+L +M ++
Sbjct: 485 ELYRKMQKE 493
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 2/228 (0%)
Query: 331 YPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK 390
+ G + Y LR + DA L +M+E + + L+ A +K+ ++ +
Sbjct: 41 FSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVIS 100
Query: 391 FKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYC 450
+ G+ D +++ LI FC+ L A L M+ GF PS ++ +V+G+C
Sbjct: 101 LFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFC 160
Query: 451 KKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSV 510
+ ++L D+ + G + +Y +I LC+ Q+ A + HM+ GI D V
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVV 220
Query: 511 IYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGE 558
Y SL + SG V++ +L +M R+ I+ + + ++ D +G+
Sbjct: 221 TYNSLITRLFHSGTWGVSARILSDMM--RMGISPDVITFSALIDVYGK 266
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 233/508 (45%), Gaps = 28/508 (5%)
Query: 56 ISFPFFKWVESTPH---YTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXX 112
I F W+ S +++ CS + +++LA+Y+ F + +L + + +
Sbjct: 79 IGVKLFDWLSSEKKDEFFSNGFACS-SFLKLLARYRIFNEIEDVLGNLRNENV------- 130
Query: 113 XXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSL 171
++ + LS ++ YA+S A+++++ + LY P + AC LLS L
Sbjct: 131 ----------KLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLL 180
Query: 172 LKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDI 231
+K K++ + G ++ Y L+ VE ++L+ KG +P+I
Sbjct: 181 VKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNI 240
Query: 232 FTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE 291
YNT+I YCK G A + +++ +G + ++ ++I GFCKEG + R+ SE
Sbjct: 241 VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300
Query: 292 IKDATPNHVTY--TTLIDG-YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
+K+ + +ID Y ++D A + ++ A P VATYN ++ +LC++G
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII-ANDCKPDVATYNILINRLCKEG 359
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
+ A L+E S+K + +N++ LI AY K + A K +M E G KPD TY
Sbjct: 360 KKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYG 419
Query: 409 ALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSK 468
LIHG ++ A + ++D G +P Y+ ++ G CK L E L +
Sbjct: 420 ILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR 479
Query: 469 GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
+ DA VY LI + + A K+F G+ D V + ++ + +SG A
Sbjct: 480 NILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Query: 529 SNVLEEMAKRRLIITAKIYSCFSVPDGH 556
+ M + L+ YS ++ DG+
Sbjct: 540 LACMNRMNEEHLVPDKFTYS--TIIDGY 565
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 157/297 (52%), Gaps = 2/297 (0%)
Query: 158 KPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQ 217
KP + +L++ L K+G V + G++ N Y LI A KS++ + A +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 218 LLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFC 277
LL +M E+G PDI TY LI G +A++++ K+ G++ D YN L+ G C
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 278 KEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVA 335
K GR A +FSE+ D P+ Y TLIDG+ ++ + D+A KV L KG+ V
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
+N++++ C+ G + +A +N M+E+ + D T +T+I+ Y K D+ +A+K M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKK 452
++ KP+ TY +LI+GFC + + A+E M P+ +Y+ ++ K+
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 170/373 (45%), Gaps = 17/373 (4%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y KS+ A ++ QM KP + +L+ L+ G + + +L+ G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
V + IYN L+ K+ AK L +EM ++ ++PD + Y TLI + + G EA
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGY 309
+ +G+ +D+V +N++I GFC+ G + EA + + + P+ TY+T+IDGY
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
K ++ A+K+ ME P V TY S++ C G + A + EM + + +
Sbjct: 566 VKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNV 625
Query: 370 ITCNTLINAYSK-IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK------MDELES 422
+T TLI + +K L+ A+ + M+ + P+ T+ L+ GF K + E +
Sbjct: 626 VTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDG 685
Query: 423 AK--------ELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
+ E M G++ +Y+ + C V D+ + KG D
Sbjct: 686 SNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDP 745
Query: 475 SVYRALIRRLCKI 487
+ A++ C +
Sbjct: 746 VSFAAILHGFCVV 758
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT----NVVWKIHKRLVQDGVVLNIYIYN 200
A + F++M+L L P++ T L+ SL K+ +T W++ ++ + V N +N
Sbjct: 609 AEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL---MMTNKCVPNEVTFN 665
Query: 201 CLIHACSKSRDVERA--------------KQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
CL+ K + + + M+ G YN+ + C GM
Sbjct: 666 CLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGM 725
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRM 288
A QDKM ++G + D VS+ ++++GFC G ++ M
Sbjct: 726 VKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNM 767
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 196/390 (50%), Gaps = 11/390 (2%)
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQ-MRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKR 186
V S ++ + K + AL FE + L P+L T L+S+L + G + V + +R
Sbjct: 173 VCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR 232
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
L +G + Y+ IH K + A EM EKG+ D+ +Y+ LI K+G
Sbjct: 233 LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 292
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTT 304
EAL + KM +EG+ ++++Y ++I G CK G++ EA +F+ I + Y T
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
LIDG C+ L++A + ME +G+ P + TYN+++ LC GR+ +A+++ K
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKG 407
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
V D IT +TL+++Y K+ ++ + L+ + + LE+ + D L+ F M A
Sbjct: 408 VVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEAD 467
Query: 425 ELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
L M + TP +Y+ ++ GYCK ++ L + +E L K A Y +I L
Sbjct: 468 ALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE-LRKSSVSAAVCYNRIIDAL 526
Query: 485 CKIEQIECAEKLFYHMEGNGISGDSVIYTS 514
CK ++ A ++ + G+ D I+TS
Sbjct: 527 CKKGMLDTATEVLIELWEKGLYLD--IHTS 554
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 175/358 (48%), Gaps = 20/358 (5%)
Query: 197 YIYNCLIHACSKSRDVERAKQLL---NEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
++ + LIH S +RD + +K LL + + G P T+ +LI + +KG A+ +
Sbjct: 98 HMLDSLIHGFSITRD-DPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEV 156
Query: 254 QDKMEREGIN--LDIVSYNSLIYGFCKEGRMREATRMFSEIKDA---TPNHVTYTTLIDG 308
+ M + +N D +++I GFCK G+ A F D+ PN VTYTTL+
Sbjct: 157 LEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSA 216
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQAD 368
C+ ++D+ + +E +G Y++ + + G + DA EM EK + D
Sbjct: 217 LCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRD 276
Query: 369 NITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLF 428
++ + LI+ SK G+++ AL KM++ G++P+ TY A+I G CKM +LE A L
Sbjct: 277 VVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFN 336
Query: 429 GMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIE 488
+L G Y ++DG C+K N++ ++ + +G+ Y +I LC
Sbjct: 337 RILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAG 396
Query: 489 QIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKI 546
++ A+++ G+ GD + Y++L +Y K N+ + RR + AKI
Sbjct: 397 RVSEADEV-----SKGVVGDVITYSTLLDSYIK------VQNIDAVLEIRRRFLEAKI 443
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 180/385 (46%), Gaps = 43/385 (11%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTV---LLSSLLKDGTT 177
D ++ + ++ Y K+ ++AL++F ++R K + A ++ +L K G
Sbjct: 477 DLTPDTATYATMIKGYCKTGQIEEALEMFNELR----KSSVSAAVCYNRIIDALCKKGML 532
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ ++ L + G+ L+I+ L+H+ + + L+ +E+ + N
Sbjct: 533 DTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDA 592
Query: 238 ISLYCKKGMHYEALSIQDKMEREGI----------------------------------N 263
I L CK+G A+ + M R+G+ +
Sbjct: 593 ILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSS 652
Query: 264 LDIVSYNSLIYGFCKEGRMREATRM--FSEIKDATPNHVTYTTLIDGYCKANELDQALKV 321
+D++ Y +I G CKEG + +A + F++ + T N +TY +LI+G C+ L +AL++
Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+ +E GL P TY ++ LC++G DA KLL+ M K + + I N++++ Y K
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
+G + A++ ++ + + PD FT ++I G+CK ++E A + D + +
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 442 YSWIVDGYCKKDNVDAILALPDEFL 466
+ +++ G+C K ++ L E L
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREML 857
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 226/529 (42%), Gaps = 82/529 (15%)
Query: 124 VNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
+N V+S+ L+ +K ++AL + +M ++P+L T ++ L K G +
Sbjct: 273 MNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAF 332
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+ R++ G+ ++ ++Y LI + ++ RA +L +ME++G+ P I TYNT+I+
Sbjct: 333 VLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGL 392
Query: 242 CKKGMHYEA------------------------------LSIQDKMEREGINLDIVSYNS 271
C G EA L I+ + I +D+V N
Sbjct: 393 CMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNI 452
Query: 272 LIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKG 329
L+ F G EA ++ + D TP+ TY T+I GYCK ++++AL++ +
Sbjct: 453 LLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSS 512
Query: 330 LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKS-- 387
+ V YN I+ LC+ G + A ++L E+ EK + D T TL+++ G K
Sbjct: 513 VSAAVC-YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGIL 571
Query: 388 ALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS------ 441
L + + L S + L+ CK E+A E+ M G T ++ S
Sbjct: 572 GLVYGLEQLNSDVCLGMLNDAILL--LCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTL 629
Query: 442 ----------------------------YSWIVDGYCKKDNVDAILALPDEFLSKGLCLD 473
Y+ I++G CK+ + L L S+G+ L+
Sbjct: 630 VDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLN 689
Query: 474 ASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLE 533
Y +LI LC+ + A +LF +E G+ V Y L K G A +L+
Sbjct: 690 TITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLD 749
Query: 534 EMAKRRLIITAKIYSCFSVPDGH---GENKVSQMFWDHVVERGLMSRNT 579
M + L+ IY+ S+ DG+ G+ + + VV R +M R T
Sbjct: 750 SMVSKGLVPNIIIYN--SIVDGYCKLGQTEDAM----RVVSRKMMGRVT 792
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 172/377 (45%), Gaps = 11/377 (2%)
Query: 134 IH-YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGV 192
IH Y K DAL +M + + + ++L+ L K+G + +++++GV
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 193 VLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
N+ Y +I K +E A L N + G+ D F Y TLI C+KG A S
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKA 312
+ ME+ GI I++YN++I G C GR+ EA + K + +TY+TL+D Y K
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVS---KGVVGDVITYSTLLDSYIKV 425
Query: 313 NELDQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
+D L++ R +EAK + + N +L+ G +A+ L M E + D T
Sbjct: 426 QNIDAVLEIRRRFLEAK-IPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTAT 484
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
T+I Y K G ++ AL+ N++ +S + Y +I CK L++A E+L +
Sbjct: 485 YATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELW 543
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILAL--PDEFLSKGLCLDASVYRALIRRLCKIEQ 489
+ G + ++ IL L E L+ +CL + I LCK
Sbjct: 544 EKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCL--GMLNDAILLLCKRGS 601
Query: 490 IECAEKLFYHMEGNGIS 506
E A +++ M G++
Sbjct: 602 FEAAIEVYMIMRRKGLT 618
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 176/442 (39%), Gaps = 72/442 (16%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
+ LL S +K + V +I +R ++ + +++ + N L+ A A L M E
Sbjct: 416 STLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPE 475
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
+ PD TY T+I YCK G EAL + +++ + ++ V YN +I CK+G +
Sbjct: 476 MDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVS-AAVCYNRIIDALCKKGMLDT 534
Query: 285 ATRMFSEIKDA-------TPNHVTYTTLIDG----------------------------- 308
AT + E+ + T + ++ +G
Sbjct: 535 ATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAIL 594
Query: 309 -YCKANELDQALKVRELMEAKGL---YPG------------------------------- 333
CK + A++V +M KGL +P
Sbjct: 595 LLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMD 654
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
V Y I+ LC++G + A L + + V + IT N+LIN + G L AL+ +
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
+ GL P TY LI CK A++LL M+ G P+ Y+ IVDGYCK
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
+ + + + + DA ++I+ CK +E A +F + IS D +
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 514 SLAYAYWKSGKTSVASNVLEEM 535
L + G+ A +L EM
Sbjct: 835 FLIKGFCTKGRMEEARGLLREM 856
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 176/402 (43%), Gaps = 16/402 (3%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
T L + + P L + L L + N + + + +L + +N IY+
Sbjct: 7 TSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSI 66
Query: 202 LIHACSKSRDVERAKQLLN-EMEEKGVVPDIFTYNTLISLYC------KKGMHYEALSIQ 254
+ A E A++ +N + + + P ++LI + KG+ L ++
Sbjct: 67 VSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGL----LILR 122
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNH----VTYTTLIDGYC 310
D + G +++ SLIY F ++G M A + + + N+ + +I G+C
Sbjct: 123 DCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFC 182
Query: 311 KANELDQALKVRELMEAKG-LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
K + + AL E G L P + TY +++ LCQ G++ + L+ + ++ + D
Sbjct: 183 KIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDC 242
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
+ + I+ Y K G L AL +M+E G+ D +Y LI G K +E A LL
Sbjct: 243 VFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGK 302
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
M+ G P+ +Y+ I+ G CK ++ L + LS G+ +D +Y LI +C+
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN 362
Query: 490 IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNV 531
+ A + ME GI + Y ++ +G+ S A V
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV 404
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 65/320 (20%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
T++++ L K+G + GV LN YN LI+ + + A +L + +E
Sbjct: 659 TIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLEN 718
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
G+VP TY LI CK+G+ +A + D M +G+ +I+ YNS++ G+CK G+ +
Sbjct: 719 IGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTED 778
Query: 285 ATRMFSE--IKDATPNHVTYTTLIDGYCKANELDQALKV--------------------- 321
A R+ S + TP+ T +++I GYCK ++++AL V
Sbjct: 779 AMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIK 838
Query: 322 -----RELMEAKGLYPGVATYNSILR--------------------KLCQDGRIRDANKL 356
+ EA+GL + S+++ +LC+ GR+ A K+
Sbjct: 839 GFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKI 898
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK-----ALI 411
L+E+S +T+ + +G + L+F N + E +K + + + +
Sbjct: 899 LDEIS-----------STIYPSGKNLGSYQR-LQFLNDVNEEEIKKKDYVHDFHSLHSTV 946
Query: 412 HGFCKMDELESAKELLFGML 431
C +LE A E + +L
Sbjct: 947 SSLCTSGKLEQANEFVMSVL 966
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 2/207 (0%)
Query: 194 LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
+++ Y +I+ K + +A L + + +GV + TYN+LI+ C++G EAL +
Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRL 712
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCK 311
D +E G+ V+Y LI CKEG +A ++ + K PN + Y +++DGYCK
Sbjct: 713 FDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK 772
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
+ + A++V + P T +S+++ C+ G + +A + E +K + AD
Sbjct: 773 LGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLES 398
LI + G ++ A +ML S
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREMLVS 859
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 228/530 (43%), Gaps = 73/530 (13%)
Query: 34 VLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTA 93
+S TT+ Q L + + P+ FF WV S ++H Q + M++ L + ++ A
Sbjct: 65 TISRTTVLQTLRLIKV----PADGLRFFDWV-SNKGFSHKEQSFFLMLEFLGRARNLNVA 119
Query: 94 QQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMR 153
+ L I R + ++ + + L+ Y + + Q+++++F+ M+
Sbjct: 120 RNFLFSIERRS--------------NGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMK 165
Query: 154 LYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVE 213
+ P + LLS LLK G T +
Sbjct: 166 QMGISPSVLTFNSLLSILLKRGRTGM---------------------------------- 191
Query: 214 RAKQLLNEMEEK-GVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSL 272
A L +EM GV PD +T+NTLI+ +CK M EA I ME N D+V+YN++
Sbjct: 192 -AHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTI 250
Query: 273 IYGFCKEGRMREA----TRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAK 328
I G C+ G+++ A + M + D PN V+YTTL+ GYC E+D+A+ V M ++
Sbjct: 251 IDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSR 310
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLL--NEMSEKKVQADNITCNTLINAYSKIGDLK 386
GL P TYN++++ L + R + +L + D T N LI A+ G L
Sbjct: 311 GLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLD 370
Query: 387 SALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA---------KELLFGMLDAGFTP 437
+A+K +ML L PD +Y LI C +E + A KE+L G + P
Sbjct: 371 AAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC--KP 428
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
+Y+ + + C + + + +G+ D Y+ LI C+ + + A +L
Sbjct: 429 LAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYELL 487
Query: 498 YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
M D Y L K G+ +A + L+ M + + A +
Sbjct: 488 VLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTF 537
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
+ +LI Y A +++K+ + M+ G+ P V T+NS+L L + GR A+ L +EM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 362 EK-KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
V D+ T NTLIN + K + A + M PD TY +I G C+ ++
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 421 ESAKELLFGMLDAG--FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
+ A +L GML P+ SY+ +V GYC K +D + + + LS+GL +A Y
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNG----ISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
LI+ L + + + + + + GN + D+ + L A+ +G A V +E
Sbjct: 321 TLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQE 378
Query: 535 MAKRRLIITAKIYS 548
M +L + YS
Sbjct: 379 MLNMKLHPDSASYS 392
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 139/590 (23%), Positives = 242/590 (41%), Gaps = 121/590 (20%)
Query: 44 LLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHR 103
+++L L+ S + F+W + P + HS A+ L ++ F T Q+LD++
Sbjct: 46 IVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDS 105
Query: 104 DFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPA 163
I P+ + ++ + ++R+ + + V + + + +KP L
Sbjct: 106 --------------IGLPPD--DAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKV 149
Query: 164 CTVLLSSLLKD--------------------------------GTTNVV---WKIHKRLV 188
+L L+K+ TN + +K+ + +
Sbjct: 150 FNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMK 209
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEK----------------------- 225
GV N +YN L+HA K+ V RA+ L++EM+E
Sbjct: 210 TSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMV 269
Query: 226 --------GVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFC 277
G VPD+ T ++ + C +G EAL + +++E +G +D+V+ N+L+ G+C
Sbjct: 270 LLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 329
Query: 278 KEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVA 335
G+MR A R F E+ K PN TY LI GYC LD AL M+ + A
Sbjct: 330 ALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFA 389
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEK-KVQADNITC-NTLINAYSKIGDLKSALKF-- 391
T+N+++R L GR D K+L M + V I N +I + K + AL+F
Sbjct: 390 TFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLL 449
Query: 392 -------------------------------KNKMLESGLKPDPFTYKALIHGFCKMDEL 420
++M+ G P LIH + + ++
Sbjct: 450 KMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKI 509
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
E + EL+ M+ G+ P +++ ++ G+CK+D V + ++ +G D Y L
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASN 530
+ LC I+ A LF M I D +++SL + S KT++ N
Sbjct: 570 LEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCL--SQKTAIHVN 617
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 152/357 (42%), Gaps = 11/357 (3%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEK-GVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
Y L H R + QLL+EM + G+ PD + T+I + + + +S+ D +
Sbjct: 79 YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLV 138
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNH---VTYTTLIDGYCKANE 314
+ GI + +NS++ KE + A F+ A+ H TY L+ G N
Sbjct: 139 SKFGIKPSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+ K+ ++M+ G+ P YN++L LC++G++ A L++EM E +++T N
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNI 253
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
LI+AY L ++ K G PD T ++ C + A E+L + G
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
+ + +V GYC + E KG + Y LI C + ++ A
Sbjct: 314 GKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSAL 373
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKI--YSC 549
F M+ + I + + +L G+T +LE M + A+I Y+C
Sbjct: 374 DTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNC 430
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 119/284 (41%), Gaps = 7/284 (2%)
Query: 268 SYNSLIYGFCKEGRMREATRMFSEIKDAT---PNHVTYTTLIDGYCKANELDQALKVREL 324
+Y +L + C R ++ E+ D+ P+ + T+I G+ +A + + + V +L
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGD 384
+ G+ P + +NSIL L ++ +M + D T L+ S
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 385 LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW 444
+ K M SG+ P+ Y L+H CK ++ A+ L+ M + P+ +++
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNI 253
Query: 445 IVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNG 504
++ YC + + + L ++ S G D ++ LC ++ A ++ +E G
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Query: 505 ISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
D V +L Y GK VA EM ++ + + Y+
Sbjct: 314 GKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYN 357
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 221/489 (45%), Gaps = 42/489 (8%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
LV Y K AL +F +M L P +V++ K+ + + R+
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ + + + +I C K+ E A ++ N+ E + F N + L+CK+G A
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG-FMCNKIFLLFCKQGKVDAAT 469
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGY 309
S ME++GI ++V YN+++ C+ M A +FSE+ K PN+ TY+ LIDG+
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL-NEMSEKKVQAD 368
K + A V M A YN+I+ LC+ G+ A ++L N + EK+
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 369 NITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFT---------------------- 406
+ N++I+ + K+GD SA++ +M E+G P+ T
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649
Query: 407 -------------YKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
Y ALI GFCK +++++A L + + G P+ Y+ ++ G+
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLG 709
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
+DA + L + ++ G+ D Y +I L K I A L+ + GI D +++
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHM 769
Query: 514 SLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMF--WDHVVE 571
L K G+ AS +LEEM K+ + +YS + H E +++ F D ++E
Sbjct: 770 VLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTV-IAGHHREGNLNEAFRLHDEMLE 828
Query: 572 RGLMSRNTM 580
+G++ +T+
Sbjct: 829 KGIVHDDTV 837
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 208/470 (44%), Gaps = 76/470 (16%)
Query: 142 TQDALQVFEQMRLYQLKPHLPAC----TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
T D + + +R + K +PA T ++ + +K+G ++ +V G+ +++
Sbjct: 287 TPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVI 346
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
L++ K ++ +A L N MEE+G+ PD ++ ++ +CK +A+ +M
Sbjct: 347 AATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRM 406
Query: 258 EREGINLDIVSYNSLIYG----------------------------------FCKEGRMR 283
+ I V +++I G FCK+G++
Sbjct: 407 KSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVD 466
Query: 284 EAT--------------------------RM---------FSEI--KDATPNHVTYTTLI 306
AT RM FSE+ K PN+ TY+ LI
Sbjct: 467 AATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILI 526
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL-NEMSEKKV 365
DG+ K + A V M A YN+I+ LC+ G+ A ++L N + EK+
Sbjct: 527 DGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRY 586
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ N++I+ + K+GD SA++ +M E+G P+ T+ +LI+GFCK + ++ A E
Sbjct: 587 SMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALE 646
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+ M +Y ++DG+CKK+++ L E GL + SVY +LI
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ +++ A L+ M +GIS D YT++ K G ++AS++ E+
Sbjct: 707 NLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 756
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 172/355 (48%), Gaps = 5/355 (1%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A +F +M L+P+ ++L+ K+ W + ++ N IYN +I+
Sbjct: 503 ARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIIN 562
Query: 205 ACSKSRDVERAKQLL-NEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
K +AK++L N ++EK +YN++I + K G A+ +M G +
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS 622
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKV 321
++V++ SLI GFCK RM A M E+K + + Y LIDG+CK N++ A +
Sbjct: 623 PNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+ GL P V+ YNS++ G++ A L +M + D T T+I+ K
Sbjct: 683 FSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLK 742
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
G++ A +++L+ G+ PD + L++G K + A ++L M TP+
Sbjct: 743 DGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLL 802
Query: 442 YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
YS ++ G+ ++ N++ L DE L KG+ D +V+ L+ ++E+ A K+
Sbjct: 803 YSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS--GRVEKPPAASKI 855
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 194/420 (46%), Gaps = 4/420 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E+ + ++L+ Y +++ A+ F M ++ P +P +LSSL++ + +
Sbjct: 166 ELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKE 225
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
I+ ++V GV + L+ A + R E A ++ + +G PD ++ + C
Sbjct: 226 IYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAAC 285
Query: 243 KKGMHYEALSIQDKME-REGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDATPNHV 300
K AL + +M + G+ +Y S+I F KEG M EA R+ E + P V
Sbjct: 286 KTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSV 345
Query: 301 -TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
T+L++GYCK NEL +AL + ME +GL P ++ ++ C++ + A +
Sbjct: 346 IAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMR 405
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
M ++ ++ +T+I K ++AL+ N ES + F + FCK +
Sbjct: 406 MKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIA-HGFMCNKIFLLFCKQGK 464
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
+++A L M G P+ Y+ ++ +C+ N+D ++ E L KGL + Y
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
LI K + + A + M + + VIY ++ K G+TS A +L+ + K +
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 172/380 (45%), Gaps = 6/380 (1%)
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA 250
G L +N L++A +++ ++ A M ++ VVP + N ++S + + EA
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDG 308
I +KM G+ D V+ L+ +E + EA ++F + + A P+ + ++ +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 309 YCKANELDQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
CK +L AL + RE+ G+ TY S++ ++G + +A ++++EM +
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
I +L+N Y K +L AL N+M E GL PD + ++ FCK E+E A E
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M PS ++ G K ++ +A L + ++ + + + CK
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIA-HGFMCNKIFLLFCKQ 462
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
+++ A ME GI + V Y ++ A+ + +A ++ EM ++ L Y
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522
Query: 548 SCFSVPDGHGENKVSQMFWD 567
S DG +NK Q WD
Sbjct: 523 SILI--DGFFKNKDEQNAWD 540
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 209/447 (46%), Gaps = 34/447 (7%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQ-VFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
+S++ + L+ + + + D + ++ +M + P + A VL+ S K G + +
Sbjct: 92 DSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL 151
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
+ V + ++ YN +I + + A Q L+EM + G++PD +YNTLI +CK
Sbjct: 152 LRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCK 208
Query: 244 KGMHYEALSIQDK----------------------------MEREGINLDIVSYNSLIYG 275
G A ++ D+ M G + D+V+++S+I
Sbjct: 209 VGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINR 268
Query: 276 FCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPG 333
CK G++ E + E+++ + PNHVTYTTL+D KAN AL + M +G+
Sbjct: 269 LCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 328
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
+ Y ++ L + G +R+A K + E + +T L++ K GDL SA
Sbjct: 329 LVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIIT 388
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
+MLE + P+ TY ++I+G+ K LE A LL M D P+ +Y ++DG K
Sbjct: 389 QMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAG 448
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
+ + L E G+ + + AL+ L +I +I+ + L M G++ D + YT
Sbjct: 449 KEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYT 508
Query: 514 SLAYAYWKSGKTSVASNVLEEMAKRRL 540
SL ++K G A EEM +R +
Sbjct: 509 SLIDVFFKGGDEEAALAWAEEMQERGM 535
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 160/323 (49%), Gaps = 38/323 (11%)
Query: 166 VLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEK 225
VL+S +LK G W +K + + G+ +I +N ++++ K D E +L ++M+
Sbjct: 544 VLISGMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC 602
Query: 226 GVVPDIFTYNTLISLYCKKGMHYEALSIQDKM----------------------ERE--- 260
G+ P + + N ++ + C+ G EA+ I ++M +R
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 662
Query: 261 ----------GINLDIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVTYTTLIDG 308
GI L YN+LI CK G ++A + E + P+ VT+ +L+ G
Sbjct: 663 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 722
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQAD 368
Y + + +AL +M G+ P VATYN+I+R L G I++ +K L+EM + ++ D
Sbjct: 723 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 782
Query: 369 NITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLF 428
+ T N LI+ +KIG++K ++ +M+ GL P TY LI F + ++ A+ELL
Sbjct: 783 DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLK 842
Query: 429 GMLDAGFTPSYCSYSWIVDGYCK 451
M G +P+ +Y ++ G CK
Sbjct: 843 EMGKRGVSPNTSTYCTMISGLCK 865
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 179/363 (49%), Gaps = 6/363 (1%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
T+LLSS + + + ++ +V G ++ ++ +I+ K V LL EMEE
Sbjct: 231 TILLSSYY---NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEE 287
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
V P+ TY TL+ K ++ AL++ +M GI +D+V Y L+ G K G +RE
Sbjct: 288 MSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLRE 347
Query: 285 ATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A + F + + PN VTYT L+DG CKA +L A + M K + P V TY+S++
Sbjct: 348 AEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMIN 407
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
+ G + +A LL +M ++ V + T T+I+ K G + A++ +M G++
Sbjct: 408 GYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEE 467
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALP 462
+ + AL++ ++ ++ K L+ M+ G T +Y+ ++D + K + +A LA
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWA 527
Query: 463 DEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKS 522
+E +G+ D Y LI + K ++ A+ + M GI D + + + K
Sbjct: 528 EEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQ 586
Query: 523 GKT 525
G +
Sbjct: 587 GDS 589
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 201/451 (44%), Gaps = 38/451 (8%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N S ++ Y K M ++A+ + +M + P+ ++ L K G + ++
Sbjct: 398 NVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 457
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
K + GV N YI + L++ + ++ K L+ +M KGV D Y +LI ++ K
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 517
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE--ATRMFSEIKDATPNHVTY 302
G AL+ ++M+ G+ D+VSYN LI G K G++ A + E K P+ T+
Sbjct: 518 GDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMRE-KGIEPDIATF 576
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM-- 360
+++ K + + LK+ + M++ G+ P + + N ++ LC++G++ +A +LN+M
Sbjct: 577 NIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML 636
Query: 361 ----------------SEKKVQADNI-----------------TCNTLINAYSKIGDLKS 387
S K +AD I NTLI K+G K
Sbjct: 637 MEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKK 696
Query: 388 ALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVD 447
A M G PD T+ +L+HG+ + A M++AG +P+ +Y+ I+
Sbjct: 697 AAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR 756
Query: 448 GYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISG 507
G + + E S+G+ D Y ALI KI ++ + ++ M +G+
Sbjct: 757 GLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816
Query: 508 DSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
+ Y L + GK A +L+EM KR
Sbjct: 817 KTSTYNVLISEFANVGKMLQARELLKEMGKR 847
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 171/373 (45%), Gaps = 45/373 (12%)
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
I+ +++ GV +++ N LIH+ K V R ++ + + + D TYNT+IS C
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCK---VGRLSFAISLLRNRVISIDTVTYNTVISGLC 172
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTY 302
+ G+ EA +M + GI D VSYN+LI GFCK G A + EI + N +T+
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL--NLITH 230
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
T L+ Y + +++A + M G P V T++SI+ +LC+ G++ + LL EM E
Sbjct: 231 TILLSSYYNLHAIEEAYRD---MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEE 287
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
V +++T TL+++ K + AL ++M+ G+ D Y L+ G K +L
Sbjct: 288 MSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLRE 347
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
A++ +L+ P+ +Y+ +VD
Sbjct: 348 AEKTFKMLLEDNQVPNVVTYTALVD----------------------------------- 372
Query: 483 RLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLII 542
LCK + AE + M + + V Y+S+ Y K G A ++L +M + ++
Sbjct: 373 GLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVP 432
Query: 543 TAKIYSCFSVPDG 555
Y +V DG
Sbjct: 433 NGFTYG--TVIDG 443
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 168/335 (50%), Gaps = 9/335 (2%)
Query: 215 AKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS-IQDKMEREGINLDIVSYNSLI 273
A + L+ M GVVPD +N+LI + G+ ++ +S I KM G++ D+ + N LI
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136
Query: 274 YGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPG 333
+ FCK GR+ A + + + + VTY T+I G C+ D+A + M G+ P
Sbjct: 137 HSFCKVGRLSFAISLLRN-RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPD 195
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
+YN+++ C+ G A L++E+SE + IT L+++Y + ++ A +
Sbjct: 196 TVSYNTLIDGFCKVGNFVRAKALVDEISELNL----ITHTILLSSYYNLHAIEEAYR--- 248
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
M+ SG PD T+ ++I+ CK ++ LL M + P++ +Y+ +VD K +
Sbjct: 249 DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKAN 308
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
LAL + + +G+ +D VY L+ L K + AEK F + + + V YT
Sbjct: 309 IYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYT 368
Query: 514 SLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
+L K+G S A ++ +M ++ +I YS
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 176/395 (44%), Gaps = 3/395 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E N+ +L LV H + ++ + + M + T L+ K G
Sbjct: 466 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALA 525
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ + + G+ ++ YN LI K V A M EKG+ PDI T+N +++
Sbjct: 526 WAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQR 584
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHV 300
K+G L + DKM+ GI ++S N ++ C+ G+M EA + ++ + + PN
Sbjct: 585 KQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLT 644
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TY +D K D K E + + G+ YN+++ LC+ G + A ++ +M
Sbjct: 645 TYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 704
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ D +T N+L++ Y ++ AL + M+E+G+ P+ TY +I G +
Sbjct: 705 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 764
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+ + L M G P +Y+ ++ G K N+ + + E ++ GL S Y L
Sbjct: 765 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 824
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
I + ++ A +L M G+S ++ Y ++
Sbjct: 825 ISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTM 859
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 186/439 (42%), Gaps = 75/439 (17%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
++A + F+ + P++ T L+ L K G + I ++++ V+ N+ Y+ +
Sbjct: 346 REAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSM 405
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME---- 258
I+ K +E A LL +ME++ VVP+ FTY T+I K G A+ + +M
Sbjct: 406 INGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGV 465
Query: 259 -------------------------------REGINLDIVSYNSLIYGFCKEGRMREATR 287
+G+ LD ++Y
Sbjct: 466 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINY------------------ 507
Query: 288 MFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD 347
T+LID + K + + AL E M+ +G+ V +YN ++ + +
Sbjct: 508 ---------------TSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKF 552
Query: 348 GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
G++ A+ M EK ++ D T N ++N+ K GD + LK +KM G+KP +
Sbjct: 553 GKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSC 611
Query: 408 KALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
++ C+ ++E A +L M+ P+ +Y +D K DAI + LS
Sbjct: 612 NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLS 671
Query: 468 KGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSV 527
G+ L VY LI LCK+ + A + ME G D+V + SL + Y+ V
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYF------V 725
Query: 528 ASNVLEEMAKRRLIITAKI 546
S+V + ++ +++ A I
Sbjct: 726 GSHVRKALSTYSVMMEAGI 744
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 233/554 (42%), Gaps = 48/554 (8%)
Query: 5 ENQRQFIDGVCAIIVKGHWGNLL-----KVNN-APVLSSTTIHQVLLQLSLNGYGPSISF 58
+N + +D +C+ + + LL +V + P L I +VLL+ + S +
Sbjct: 41 QNPSKIVDVICSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDA---SRAI 97
Query: 59 PFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQML-DKIAHRDFXXXXXXXXXXXR 117
FFKWV+ ++ ++ IL K F A Q L + I
Sbjct: 98 TFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVS 157
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
D+ + V LV Y K + ++ +VF ++ + C LL+ LLK
Sbjct: 158 ATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLM 217
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
W+++ + + G+ N Y +N L + + L +MEE+G PD+ TYNTL
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--A 295
+S YC++G EA + M R + D+V+Y SLI G CK+GR+REA + F + D
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ ++Y TLI YCK + Q+ K+ M + P T I+ ++GR+ A
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVN 397
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML-ESGLKPDPFTYKALIHGF 414
+ E+ KV C+ LI + + G +A ++++ E G + P TY LI
Sbjct: 398 FVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESL 457
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
+ D +E A L L + ++ LDA
Sbjct: 458 SRCDAIEEA-----------------------------------LVLKGKLKNQNQVLDA 482
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
YRALI LC+I + AE L M + + DS I +L Y Y K A +L
Sbjct: 483 KTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSL 542
Query: 535 MAKRRLIITAKIYS 548
A I + Y+
Sbjct: 543 FAMEFRIFDPESYN 556
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 193/405 (47%), Gaps = 8/405 (1%)
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNI- 196
K+ + A Q+FE M+ + P+ L+SS + G + + L+Q V
Sbjct: 115 KAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL---LLQSFEVEGCC 171
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
+ N L++ K VE A +L +E D T+N LI C G +AL +
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT---PNHVTYTTLIDGYCKAN 313
M G DIV+YN+LI GFCK + +A+ MF ++K + P+ VTYT++I GYCKA
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
++ +A + + M G+YP T+N ++ + G + A ++ +M D +T
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
+LI+ Y ++G + + +M G+ P+ FTY LI+ C + L A+ELL +
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
P Y+ ++DG+CK V+ + +E K D + LI C ++ A
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
+F+ M G S D + +SL K+G A + L ++A++
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARK 515
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 174/349 (49%), Gaps = 7/349 (2%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG-MHYEALSI 253
+ + YN L + K+ + A Q+ M+ GV P+ L+S + +KG +H+ +
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDATPNHV-TYTTLIDGYCK 311
E EG + + NSL+ K R+ +A ++F E ++ + N T+ LI G C
Sbjct: 162 LQSFEVEGCCMVV---NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV-QADNI 370
+ ++AL++ +M G P + TYN++++ C+ + A+++ ++ V D +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
T ++I+ Y K G ++ A + ML G+ P T+ L+ G+ K E+ +A+E+ M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
+ G P +++ ++DGYC+ V L +E ++G+ +A Y LI LC ++
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 491 ECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
A +L + I +Y + + K+GK + A+ ++EEM K++
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 156/326 (47%), Gaps = 3/326 (0%)
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
+TYN L CK G+H A + + M+ +G++ + L+ F ++G++ AT +
Sbjct: 103 FWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLL 162
Query: 291 EIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
+ + + +L++ K + ++ A+K+ + T+N ++R LC G+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 351 RDANKLLNEMSEKKVQADNITCNTLINAYSKIGDL-KSALKFKNKMLESGLKPDPFTYKA 409
A +LL MS + D +T NTLI + K +L K++ FK+ S PD TY +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKG 469
+I G+CK ++ A LL ML G P+ +++ +VDGY K + + + +S G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 470 LCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVAS 529
D + +LI C++ Q+ +L+ M G+ ++ Y+ L A + A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 530 NVLEEMAKRRLIITAKIYSCFSVPDG 555
+L ++A + +I +Y+ V DG
Sbjct: 403 ELLGQLASKDIIPQPFMYN--PVIDG 426
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 4/241 (1%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
++ Y K+ ++A + + M + P VL+ K G +I +++ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
++ + LI + V + +L EM +G+ P+ FTY+ LI+ C + +A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGY 309
+ ++ + I YN +I GFCK G++ EA + E+ K P+ +T+T LI G+
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
C + +A+ + M A G P T +S+L L + G ++A LN+++ +K Q++N
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIA-RKGQSNN 520
Query: 370 I 370
+
Sbjct: 521 V 521
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 193/405 (47%), Gaps = 8/405 (1%)
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNI- 196
K+ + A Q+FE M+ + P+ L+SS + G + + L+Q V
Sbjct: 115 KAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL---LLQSFEVEGCC 171
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
+ N L++ K VE A +L +E D T+N LI C G +AL +
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT---PNHVTYTTLIDGYCKAN 313
M G DIV+YN+LI GFCK + +A+ MF ++K + P+ VTYT++I GYCKA
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
++ +A + + M G+YP T+N ++ + G + A ++ +M D +T
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
+LI+ Y ++G + + +M G+ P+ FTY LI+ C + L A+ELL +
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
P Y+ ++DG+CK V+ + +E K D + LI C ++ A
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
+F+ M G S D + +SL K+G A + L ++A++
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARK 515
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 174/349 (49%), Gaps = 7/349 (2%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG-MHYEALSI 253
+ + YN L + K+ + A Q+ M+ GV P+ L+S + +KG +H+ +
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDATPNHV-TYTTLIDGYCK 311
E EG + + NSL+ K R+ +A ++F E ++ + N T+ LI G C
Sbjct: 162 LQSFEVEGCCMVV---NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV-QADNI 370
+ ++AL++ +M G P + TYN++++ C+ + A+++ ++ V D +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
T ++I+ Y K G ++ A + ML G+ P T+ L+ G+ K E+ +A+E+ M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
+ G P +++ ++DGYC+ V L +E ++G+ +A Y LI LC ++
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 491 ECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
A +L + I +Y + + K+GK + A+ ++EEM K++
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 156/326 (47%), Gaps = 3/326 (0%)
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
+TYN L CK G+H A + + M+ +G++ + L+ F ++G++ AT +
Sbjct: 103 FWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLL 162
Query: 291 EIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
+ + + +L++ K + ++ A+K+ + T+N ++R LC G+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 351 RDANKLLNEMSEKKVQADNITCNTLINAYSKIGDL-KSALKFKNKMLESGLKPDPFTYKA 409
A +LL MS + D +T NTLI + K +L K++ FK+ S PD TY +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKG 469
+I G+CK ++ A LL ML G P+ +++ +VDGY K + + + +S G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 470 LCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVAS 529
D + +LI C++ Q+ +L+ M G+ ++ Y+ L A + A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 530 NVLEEMAKRRLIITAKIYSCFSVPDG 555
+L ++A + +I +Y+ V DG
Sbjct: 403 ELLGQLASKDIIPQPFMYN--PVIDG 426
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 117/241 (48%), Gaps = 4/241 (1%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
++ Y K+ ++A + + M + P VL+ K G +I +++ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
++ + LI + V + +L EM +G+ P+ FTY+ LI+ C + +A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGY 309
+ ++ + I YN +I GFCK G++ EA + E+ K P+ +T+T LI G+
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
C + +A+ + M A G P T +S+L L + G ++A LN+++ +K Q++N
Sbjct: 463 CMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIA-RKGQSNN 520
Query: 370 I 370
+
Sbjct: 521 V 521
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 196/446 (43%), Gaps = 41/446 (9%)
Query: 120 DDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
+D E N+++L L + ++T DA ++ E M + PH P+C+ L+ L + +
Sbjct: 102 NDEETNNEILHNLC---SNGKLT-DACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDK 157
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT--- 236
I + +V G V + YN +I K + A LL +M G PD+ TYNT
Sbjct: 158 AMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIR 217
Query: 237 --------------------------------LISLYCKKGMHYEALSIQDKMEREGINL 264
L+ L C+ A+ + + M EG
Sbjct: 218 CMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYP 277
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVR 322
DIV+YNSL+ C+ G + E + I N VTY TL+ C D+ ++
Sbjct: 278 DIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL 337
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
+M P V TYN ++ LC+ + A +M E+K D +T NT++ A SK
Sbjct: 338 NIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKE 397
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSY 442
G + A++ + + P TY ++I G K ++ A EL MLDAG P +
Sbjct: 398 GMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITR 457
Query: 443 SWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEG 502
++ G+C+ + V+ + E ++G + S YR +I+ LCK ++IE A ++ M
Sbjct: 458 RSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLT 517
Query: 503 NGISGDSVIYTSLAYAYWKSGKTSVA 528
G D IYT++ + G S A
Sbjct: 518 GGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 2/274 (0%)
Query: 270 NSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELMEA 327
N +++ C G++ +A ++ + + P+ + + L+ G + ++LD+A+ + +M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 328 KGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKS 387
G P TYN I+ LC+ G IR A LL +MS D IT NT+I G+ +
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 388 ALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVD 447
A++F L++G P TY L+ C+ A E+L M G P +Y+ +V+
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 448 GYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISG 507
C++ N++ + ++ LS GL L+ Y L+ LC E + E++ M
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 508 DSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
+ Y L K+ S A + +M +++ +
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 118/302 (39%), Gaps = 2/302 (0%)
Query: 233 TYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI 292
T N ++ C G +A + + M R S ++L+ G + ++ +A + +
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 293 --KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
P+ +TY +I CK + AL + E M G P V TYN+++R + G
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 351 RDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
A + + + IT L+ + A++ M G PD TY +L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 411 IHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
++ C+ LE ++ +L G + +Y+ ++ C + D + + +
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 471 CLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASN 530
C Y LI LCK + A FY M D V Y ++ A K G A
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIE 405
Query: 531 VL 532
+L
Sbjct: 406 LL 407
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 95/236 (40%), Gaps = 6/236 (2%)
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
T N IL LC +G++ DA KL+ M+ +C+ L+ ++I L A+ M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
+ SG PD TY +I CK + +A LL M +G P +Y+ ++ N
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+ + + L G Y L+ +C+ A ++ M G D V Y SL
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVE 571
+ G ++V++ + L + Y+ + S +WD V E
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL------HSLCSHEYWDEVEE 335
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%)
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ D T N +++ G L A K M P + L+ G ++D+L+ A
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+L M+ +G P +Y+ I+ CKK ++ L L ++ G D Y +IR +
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
E A + + NG + YT L + ++ A VLE+MA
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMA 271
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 137/575 (23%), Positives = 238/575 (41%), Gaps = 37/575 (6%)
Query: 4 IENQRQFIDGVCAIIVKGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKW 63
I+ R ++ + ++VK +W + + L T+ ++L L SI FF+W
Sbjct: 76 IDVPRDCVETIRNVLVKHNWIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLYFFRW 135
Query: 64 VESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHD--- 120
E HS + MI IL A ML + + + +
Sbjct: 136 SELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRI 195
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
D V V S L+ + R AL++ ++ + + P C LL +L+ +
Sbjct: 196 DRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELA 255
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
+ + ++ G LN + + I ++ +LL M+ G+ PDI + I
Sbjct: 256 REFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDK 315
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRM------------ 288
CK G EA S+ K++ GI+ D VS +S+I GFCK G+ EA ++
Sbjct: 316 LCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFV 375
Query: 289 --------------------FSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELME 326
F EI + P+ V YTT+IDGYC D+A + +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 327 AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLK 386
G P + T ++ + G I DA + M + ++ D +T N L++ Y K L
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 387 SALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
+ ++M +G+ PD TY LIH ++ A E++ ++ GF PS +++ ++
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 447 DGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGIS 506
G+ K+ + L + D AL+ CK +++E A LF + G+
Sbjct: 556 GGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 507 GDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
D V+Y +L + Y G A ++ M +R ++
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 184/393 (46%), Gaps = 36/393 (9%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG----TTNV 179
+N+ VLS + Y ++ M+ Y ++P + A TV + L K G T+V
Sbjct: 269 LNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSV 328
Query: 180 VWKIHK-RLVQDGVVL---------------------------NIYIYNCLIHACSKSRD 211
++K+ + QD V + NI++Y+ + + D
Sbjct: 329 LFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGD 388
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNS 271
+ RA + E+ E G++PD Y T+I YC G +A + + G N ++ ++
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTST 447
Query: 272 LIYGFCKE-GRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAK 328
++ G C G + +A +F +K + VTY L+ GY K ++L++ ++ + M +
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSA 388
G+ P VATYN ++ + G I +AN++++E+ + + +I +SK GD + A
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 389 LKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
M + +KPD T AL+HG+CK +E A L +LDAG P Y+ ++ G
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 449 YCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
YC +++ L + +G+ + S + AL+
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 137/575 (23%), Positives = 238/575 (41%), Gaps = 37/575 (6%)
Query: 4 IENQRQFIDGVCAIIVKGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKW 63
I+ R ++ + ++VK +W + + L T+ ++L L SI FF+W
Sbjct: 76 IDVPRDCVETIRNVLVKHNWIQKYESGFSTELDQYTVIRILDDLFEETLDASIVLYFFRW 135
Query: 64 VESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHD--- 120
E HS + MI IL A ML + + + +
Sbjct: 136 SELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRI 195
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
D V V S L+ + R AL++ ++ + + P C LL +L+ +
Sbjct: 196 DRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELA 255
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
+ + ++ G LN + + I ++ +LL M+ G+ PDI + I
Sbjct: 256 REFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDK 315
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRM------------ 288
CK G EA S+ K++ GI+ D VS +S+I GFCK G+ EA ++
Sbjct: 316 LCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFV 375
Query: 289 --------------------FSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELME 326
F EI + P+ V YTT+IDGYC D+A + +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 327 AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLK 386
G P + T ++ + G I DA + M + ++ D +T N L++ Y K L
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 387 SALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
+ ++M +G+ PD TY LIH ++ A E++ ++ GF PS +++ ++
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 447 DGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGIS 506
G+ K+ + L + D AL+ CK +++E A LF + G+
Sbjct: 556 GGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLK 615
Query: 507 GDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
D V+Y +L + Y G A ++ M +R ++
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 184/393 (46%), Gaps = 36/393 (9%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG----TTNV 179
+N+ VLS + Y ++ M+ Y ++P + A TV + L K G T+V
Sbjct: 269 LNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSV 328
Query: 180 VWKIHK-RLVQDGVVL---------------------------NIYIYNCLIHACSKSRD 211
++K+ + QD V + NI++Y+ + + D
Sbjct: 329 LFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGD 388
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNS 271
+ RA + E+ E G++PD Y T+I YC G +A + + G N ++ ++
Sbjct: 389 MLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-NPPSLTTST 447
Query: 272 LIYGFCKE-GRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAK 328
++ G C G + +A +F +K + VTY L+ GY K ++L++ ++ + M +
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSA 388
G+ P VATYN ++ + G I +AN++++E+ + + +I +SK GD + A
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 389 LKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
M + +KPD T AL+HG+CK +E A L +LDAG P Y+ ++ G
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 449 YCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
YC +++ L + +G+ + S + AL+
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 186/391 (47%), Gaps = 46/391 (11%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
V+ +L + Y + D+L+VF +M+ + P A +L+ L+++ N+ +K
Sbjct: 84 VSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKF 143
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
+K M E G+ P + + N LI C+
Sbjct: 144 YK-----------------------------------NMREIGLPPTVASLNVLIKALCR 168
Query: 244 KGMHYEA-LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHV 300
+A L I +M + G + D +Y +LI G C+ GR+ EA ++F+E+ KD P V
Sbjct: 169 NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV 228
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYT+LI+G C + +D+A++ E M++KG+ P V TY+S++ LC+DGR A +L M
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM 288
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ + + +T TLI K ++ A++ ++M GLKPD Y +I GFC + +
Sbjct: 289 MARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKF 348
Query: 421 ESAKELLFGMLDAGFTPSYCSYSW-------IVDGYCKKDNVDAILALPDEFLSKGLCLD 473
A L M+ G TP+ +++ +V G C A L S+G+ ++
Sbjct: 349 REAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRA-FTLYLSMRSRGISVE 407
Query: 474 ASVYRALIRRLCKIEQIECAEKLFYHMEGNG 504
+L++ LCK + + A +L + +G
Sbjct: 408 VETLESLVKCLCKKGEFQKAVQLVDEIVTDG 438
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 161/334 (48%), Gaps = 10/334 (2%)
Query: 210 RDVERAKQLLNEMEEK---GVVPD--IFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
+DVE++ + + + G V D F Y L + K E L ++ K+E ++
Sbjct: 27 KDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSE 86
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVR 322
DI+ S+ G+ + R ++ R+F ++KD P+ Y T++ + N+L+ A K
Sbjct: 87 DILL--SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFY 144
Query: 323 ELMEAKGLYPGVATYNSILRKLCQ-DGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+ M GL P VA+ N +++ LC+ DG + K+ EM ++ D+ T TLI+ +
Sbjct: 145 KNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCR 204
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
G + A K +M+E P TY +LI+G C ++ A L M G P+ +
Sbjct: 205 FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFT 264
Query: 442 YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
YS ++DG CK + L + +++G + Y LI LCK ++I+ A +L M
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Query: 502 GNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
G+ D+ +Y + + K A+N L+EM
Sbjct: 325 LQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 145/300 (48%), Gaps = 13/300 (4%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDA-LQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
P V S L+ L+ ++ T DA L++F +M P L+S L + G +
Sbjct: 154 PTVAS--LNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEA 211
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
K+ +V+ + Y LI+ S++V+ A + L EM+ KG+ P++FTY++L+
Sbjct: 212 KKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDG 271
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPN 298
CK G +A+ + + M G ++V+Y +LI G CKE +++EA + ++ P+
Sbjct: 272 LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPD 331
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPG-------VATYNSILRKLCQDGRIR 351
Y +I G+C ++ +A + M G+ P V T N ++R LC + R
Sbjct: 332 AGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSR 391
Query: 352 DANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI 411
A L M + + + T +L+ K G+ + A++ ++++ G P T+K LI
Sbjct: 392 -AFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 3/268 (1%)
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTL 305
+++L + KM+ + +Y +++ +E ++ A + + +++ P + L
Sbjct: 103 FDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVL 162
Query: 306 IDGYCKAN-ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
I C+ + +D LK+ M +G P TY +++ LC+ GRI +A KL EM EK
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
+T +LIN ++ A+++ +M G++P+ FTY +L+ G CK A
Sbjct: 223 CAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAM 282
Query: 425 ELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
EL M+ G P+ +Y+ ++ G CK+ + + L D +GL DA +Y +I
Sbjct: 283 ELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGF 342
Query: 485 CKIEQIECAEKLFYHMEGNGISGDSVIY 512
C I + A M GI+ + + +
Sbjct: 343 CAISKFREAANFLDEMILGGITPNRLTW 370
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 8/252 (3%)
Query: 327 AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS-EKKVQADNITCNTLINAYSKIGDL 385
A G +++ ++ +L + + A L+ M E V +++I ++ Y ++
Sbjct: 44 ANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILL-SICRGYGRVHRP 102
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
+L+ +KM + P Y ++ + ++L A + M + G P+ S + +
Sbjct: 103 FDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVL 162
Query: 446 VDGYCKKDN-VDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNG 504
+ C+ D VDA L + E +G D+ Y LI LC+ +I+ A+KLF M
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222
Query: 505 ISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDG---HGENKV 561
+ V YTSL S A LEEM + I +++ S+ DG G +
Sbjct: 223 CAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG--IEPNVFTYSSLMDGLCKDGRSLQ 280
Query: 562 SQMFWDHVVERG 573
+ ++ ++ RG
Sbjct: 281 AMELFEMMMARG 292
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/494 (23%), Positives = 214/494 (43%), Gaps = 55/494 (11%)
Query: 80 MIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKS 139
++IL + + A ++LDKI +++ ++ + + ++ Y+++
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYL-----------------LDVRAYTTILHAYSRT 223
Query: 140 RMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT-NVVWKIHKRLVQDGVVLNIYI 198
+ A+ +FE+M+ P L V+L K G + + + + G+ + +
Sbjct: 224 GKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFT 283
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
+ ++ AC++ + AK+ E++ G P TYN L+ ++ K G++ EALS+ +ME
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME 343
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELD 316
D V+YN L+ + + G +EA + + K PN +TYTT+ID Y KA + D
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD------------------------ 352
+ALK+ M+ G P TYN++L L + R +
Sbjct: 404 EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Query: 353 -----------ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK 401
N++ EM + D T NTLI+AY + G A K +M +G
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL 461
TY AL++ + + S + ++ M GF P+ SYS ++ Y K N I +
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 462 PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWK 521
+ + + R L+ K + +E+ F + +G D VI+ S+ + +
Sbjct: 584 ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTR 643
Query: 522 SGKTSVASNVLEEM 535
+ A +LE +
Sbjct: 644 NNMYDQAEGILESI 657
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 177/387 (45%), Gaps = 5/387 (1%)
Query: 166 VLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEK 225
+ + L ++ +V K+ ++ +L++ Y ++HA S++ E+A L M+E
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 226 GVVPDIFTYNTLISLYCKKGMHY-EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
G P + TYN ++ ++ K G + + L + D+M +G+ D + ++++ +EG +RE
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 285 ATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A F+E+K P VTY L+ + KA +AL V + ME TYN ++
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
+ G ++A ++ M++K V + IT T+I+AY K G ALK M E+G P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAIL-AL 461
+ TY A++ K ++L M G +P+ +++ ++ C +D + +
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRV 478
Query: 462 PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWK 521
E S G D + LI + A K++ M G + Y +L A +
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 522 SGKTSVASNVLEEMAKRRLIITAKIYS 548
G NV+ +M + T YS
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYS 565
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 162/340 (47%), Gaps = 6/340 (1%)
Query: 147 QVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHAC 206
+VF +M+ +P L+S+ + G+ K++ + + G + YN L++A
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 207 SKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDI 266
++ D + ++++M+ KG P +Y+ ++ Y K G + I+++++ I
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
Query: 267 VSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVREL 324
+ +L+ K + + R F+ K P+ V + +++ + + N DQA + E
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGD 384
+ GL P + TYNS++ + G A ++L + + +++ D ++ NT+I + + G
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL 716
Query: 385 LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW 444
++ A++ ++M E G++P FTY + G+ M ++++ M P+ ++
Sbjct: 717 MQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKM 776
Query: 445 IVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
+VDGYC+ + +F+SK D I+RL
Sbjct: 777 VVDGYCRAGKYSEAM----DFVSKIKTFDPCFDDQSIQRL 812
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 186/421 (44%), Gaps = 10/421 (2%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTV----LLSSLLKDGTTNVVWKIHKRLVQDG 191
+ K+ + +AL V ++M + PA +V L+++ ++ G + + + + + G
Sbjct: 326 FGKAGVYTEALSVLKEME----ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
V+ N Y +I A K+ + A +L M+E G VP+ TYN ++SL KK E +
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGY 309
+ M+ G + + ++N+++ +G + R+F E+K P+ T+ TLI Y
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
+ A K+ M G V TYN++L L + G R ++++M K +
Sbjct: 502 GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTE 561
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
+ + ++ Y+K G+ + +N++ E + P + L+ K L ++
Sbjct: 562 TSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTL 621
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
G+ P ++ ++ + + + D + + GL D Y +L+ + +
Sbjct: 622 FKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGE 681
Query: 490 IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSC 549
AE++ +E + + D V Y ++ + + G A +L EM +R + Y+
Sbjct: 682 CWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNT 741
Query: 550 F 550
F
Sbjct: 742 F 742
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 176/413 (42%), Gaps = 2/413 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N+ + ++ Y K+ +AL++F M+ P+ +LS L K +N + K+
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ +G N +N ++ C + ++ EM+ G PD T+NTLIS Y +
Sbjct: 445 CDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRC 504
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTY 302
G +A + +M R G N + +YN+L+ ++G R + S++K P +Y
Sbjct: 505 GSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY 564
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+ ++ Y K ++ ++ ++P ++L + + + + +
Sbjct: 565 SLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKK 624
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
+ D + N++++ +++ A + E GL PD TY +L+ + + E
Sbjct: 625 HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWK 684
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
A+E+L + + P SY+ ++ G+C++ + + + E +G+ Y +
Sbjct: 685 AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Query: 483 RLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ E + M N + + + + Y ++GK S A + + ++
Sbjct: 745 GYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+ ++ M A + E +R L P L L+ ++ G +I K L + + +
Sbjct: 641 FTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ YN +I + ++ A ++L+EM E+G+ P IFTYNT +S Y GM E + +
Sbjct: 701 LVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIE 760
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANEL 315
M + + +++ ++ G+C+ G+ EA S+IK P C ++
Sbjct: 761 CMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDP------------CFDDQS 808
Query: 316 DQ--ALKVRELMEA 327
Q AL+VRE +E+
Sbjct: 809 IQRLALRVRENLES 822
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 145/290 (50%), Gaps = 2/290 (0%)
Query: 164 CTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEME 223
CT+L+ S K+G ++ K + Q V + +YN +I S ++ A + +M
Sbjct: 268 CTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMV 327
Query: 224 EKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMR 283
++GV PD+FTYNTLIS CK+G EA + M+ G+ D +SY +I G C G +
Sbjct: 328 KRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 284 EATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSIL 341
A + ++ P + + +IDGY + + AL V LM + G+ P V T N+++
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Query: 342 RKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK 401
+ GR+ DA + NEM K+ D T N L+ A +G L+ A + ++ML G +
Sbjct: 448 HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQ 507
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK 451
PD TY L+ G C L+ A+ LL + G T + + + Y +
Sbjct: 508 PDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTR 557
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 178/416 (42%), Gaps = 41/416 (9%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
AL + ++M + P L LL+ L K G + + + + G N YN LI
Sbjct: 140 ALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIK 199
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM------------------ 246
+V++A L N M + G+ P+ T N ++ C+KG+
Sbjct: 200 GLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQA 259
Query: 247 ---------------------HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREA 285
+AL + +M ++ + D V YN +I G C G M A
Sbjct: 260 NAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAA 319
Query: 286 TRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRK 343
++ + P+ TY TLI CK + D+A + M+ G+ P +Y I++
Sbjct: 320 YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQG 379
Query: 344 LCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD 403
LC G + AN+ L M + + + + N +I+ Y + GD SAL N ML G+KP+
Sbjct: 380 LCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPN 439
Query: 404 PFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPD 463
+T ALIHG+ K L A + M P +Y+ ++ C ++ L D
Sbjct: 440 VYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYD 499
Query: 464 EFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAY 519
E L +G D Y L+R LC +++ AE L ++ GI+ D V + LA Y
Sbjct: 500 EMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKY 555
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 181/385 (47%), Gaps = 10/385 (2%)
Query: 164 CTVLLSSLLKD----GTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLL 219
C + SS+++D G + + K+++ GV+ + +N L++ K+ +E+A L+
Sbjct: 120 CLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLV 179
Query: 220 NEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKE 279
EM E G P+ +YNTLI C +AL + + M + GI + V+ N +++ C++
Sbjct: 180 REMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQK 239
Query: 280 GRM-REATRMFSEIKDATPNH-----VTYTTLIDGYCKANELDQALKVRELMEAKGLYPG 333
G + ++ EI D++ + V T L+D K + QAL+V + M K +
Sbjct: 240 GVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPAD 299
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
YN I+R LC G + A + +M ++ V D T NTLI+A K G A
Sbjct: 300 SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHG 359
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
M G+ PD +YK +I G C ++ A E L ML + P ++ ++DGY +
Sbjct: 360 TMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYG 419
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
+ + L++ + LS G+ + ALI K ++ A + M I D+ Y
Sbjct: 420 DTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYN 479
Query: 514 SLAYAYWKSGKTSVASNVLEEMAKR 538
L A G +A + +EM +R
Sbjct: 480 LLLGAACTLGHLRLAFQLYDEMLRR 504
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 162/391 (41%), Gaps = 49/391 (12%)
Query: 232 FTYNTLISLY-------CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
F Y+ +S++ C +G AL ++ KM G+ ++++N L+ G CK G + +
Sbjct: 115 FDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEK 174
Query: 285 ATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A + E+++ +PN V+Y TLI G C N +D+AL + M G+ P T N I+
Sbjct: 175 ADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVH 234
Query: 343 KLCQDGRIRDANKLL---------------------------------------NEMSEK 363
LCQ G I + NK L EMS+K
Sbjct: 235 ALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQK 294
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
V AD++ N +I G++ +A F M++ G+ PD FTY LI CK + + A
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
+L M + G P SY I+ G C +V+ L L + ++ +I
Sbjct: 355 CDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIIT 543
+ A + M G+ + +L + Y K G+ A V EM ++
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 474
Query: 544 AKIYS-CFSVPDGHGENKVSQMFWDHVVERG 573
Y+ G +++ +D ++ RG
Sbjct: 475 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 127 QVLSWLVI--HYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
+VL W V+ Y + T AL V M Y +KP++ L+ +K G W +
Sbjct: 404 EVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVK 463
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ + + YN L+ A + A QL +EM +G PDI TY L+ C K
Sbjct: 464 NEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWK 523
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREA 285
G +A S+ +++ GI +D V + L + + R EA
Sbjct: 524 GRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 181/372 (48%), Gaps = 9/372 (2%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
+P+V S + L+ ++ DA++++ M + P AC L+ L ++
Sbjct: 146 EPDVVSYTI--LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Query: 181 WKIHKRLVQDGVV-LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
+++ ++ V L+ +YN LI K+ +E+A+ L + M + G PD+ TYN L++
Sbjct: 204 YEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLN 263
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP-- 297
Y M A + +M R GI LD SYN L+ C+ + +K+ P
Sbjct: 264 YYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM--VKEMEPRG 321
Query: 298 --NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
+ V+Y+TLI+ +C+A+ +A ++ E M KG+ V TY S+++ ++G A K
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
LL++M+E + D I T+++ K G++ A N M+E + PD +Y +LI G C
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
+ + A +L M P ++ +I+ G + + A + D+ + KG LD
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRD 501
Query: 476 VYRALIRRLCKI 487
V LI+ C +
Sbjct: 502 VSDTLIKASCSM 513
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 194/419 (46%), Gaps = 3/419 (0%)
Query: 133 VIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGV 192
+ + KS M +A+QVF++MR + + L+++ + I+ + G
Sbjct: 16 IANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGF 75
Query: 193 VLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
L + Y+ I K + + LL++ME G +PDI+ +N + L C++ A+
Sbjct: 76 SLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQ 135
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYC 310
M + G D+VSY LI G + G++ +A +++ + +P++ L+ G C
Sbjct: 136 TFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLC 195
Query: 311 KANELDQALK-VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
A ++D A + V E +++ + YN+++ C+ GRI A L + MS+ + D
Sbjct: 196 HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL 255
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
+T N L+N Y LK A +M+ SG++ D ++Y L+ C++ + +
Sbjct: 256 VTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK 315
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
++ SYS +++ +C+ N L +E KG+ ++ Y +LI+ +
Sbjct: 316 EMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGN 375
Query: 490 IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
A+KL M G+S D + YT++ KSG A V +M + + A Y+
Sbjct: 376 SSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 181/379 (47%), Gaps = 7/379 (1%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A+Q F M +P + + T+L++ L + G +I +++ GV + L+
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVV 192
Query: 205 ACSKSRDVERAKQLL-NEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
+R V+ A +++ E++ V YN LIS +CK G +A +++ M + G
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCE 252
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQA--L 319
D+V+YN L+ + ++ A + +E+ + +Y L+ +C+ + D+
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF 312
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
V+E ME +G + V +Y++++ C+ R A +L EM +K + + +T +LI A+
Sbjct: 313 MVKE-MEPRG-FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
+ G+ A K ++M E GL PD Y ++ CK ++ A + M++ TP
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
SY+ ++ G C+ V + L ++ K C D ++ +I L + +++ A K++
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQ 490
Query: 500 MEGNGISGDSVIYTSLAYA 518
M G + D + +L A
Sbjct: 491 MMDKGFTLDRDVSDTLIKA 509
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 167/381 (43%), Gaps = 6/381 (1%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y I KS ++ A Q+ +EM F YN I + ++ A +I M+
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELD 316
G +L +Y+ I G CK + + S+++ P+ + +D C+ N++
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
A++ M +G P V +Y ++ L + G++ DA ++ N M V DN C L+
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 377 NAYSKIGDLKSALKFKNKMLESG-LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
+ A + + ++S +K Y ALI GFCK +E A+ L M G
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE-CAE 494
P +Y+ +++ Y + + + E + G+ LDA Y L++R C++ + C
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY-SCFSVP 553
+ ME G D V Y++L + ++ T A + EEM ++ +++ Y S
Sbjct: 312 FMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 554 DGHGENKVSQMFWDHVVERGL 574
G + V++ D + E GL
Sbjct: 371 LREGNSSVAKKLLDQMTELGL 391
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 116/286 (40%), Gaps = 36/286 (12%)
Query: 299 HVTYTTLIDGYCKANELDQALKVRELME--------------------------AKGLYP 332
+ Y + I K+ +D A++V + M A+ +Y
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 333 GVA---------TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
+ TY+ + LC+ + + LL++M D N ++ +
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 384 DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYS 443
+ A++ M++ G +PD +Y LI+G + ++ A E+ M+ +G +P + +
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 444 WIVDGYCKKDNVD-AILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEG 502
+V G C VD A + +E S + L VY ALI CK +IE AE L +M
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 503 NGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
G D V Y L Y+ + A V+ EM + + + A Y+
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 200/429 (46%), Gaps = 11/429 (2%)
Query: 135 HYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVL 194
HYA +A QVF +RL + C ++ K G ++ + G
Sbjct: 696 HYA------EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHF 749
Query: 195 NIY-IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
+Y +I A K + ++A+ ++ + + G PD+ T+N+L+S Y + G + A +I
Sbjct: 750 ACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAI 809
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCK 311
+ M R+G + + S N L++ C +GR+ E + E++D + + ++D + +
Sbjct: 810 FNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFAR 869
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
A + + K+ M+A G P + Y ++ LC+ R+RDA +++EM E + +
Sbjct: 870 AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAI 929
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
N+++ Y+ I D K ++ ++ E+GL+PD TY LI +C+ E L+ M
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
+ G P +Y ++ + K+ ++ L +E LSKGL LD S Y +++
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFS 551
AEKL M+ GI L +Y SG A VL + + +T YS S
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYS--S 1107
Query: 552 VPDGHGENK 560
V D + +K
Sbjct: 1108 VIDAYLRSK 1116
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 208/444 (46%), Gaps = 42/444 (9%)
Query: 127 QVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG--TTNVVWKIH 184
QV + ++ Y++S A ++ + MR P L + L+++ LK G T N+ ++
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ G+ + YN L+ ACS+ +++ A ++ +ME PD++TYN +IS+Y +
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTY 302
G+ EA + ++E +G D V+YNSL+Y F +E + ++ +++ + +TY
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 303 TTLIDGYCKANELDQALKVRELMEA-KGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
T+I Y K +LD AL++ + M+ G P TY ++ L + R +A L++EM
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
+ ++ T + LI Y+K G + A + ML SG KPD Y ++ + +E
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL-----------PDEF---LS 467
A L M+ G TPSY Y ++ G K++ D I P E L
Sbjct: 526 KAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLV 585
Query: 468 KGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSV 527
KG C D + Q++ A Y +E + + S+ +Y SG+ S
Sbjct: 586 KGECFDLAA-----------RQLKVAITNGYELENDTL-------LSILGSYSSSGRHSE 627
Query: 528 ASNVLEEM-----AKRRLIITAKI 546
A +LE + +RLI A I
Sbjct: 628 AFELLEFLKEHASGSKRLITEALI 651
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 183/399 (45%), Gaps = 7/399 (1%)
Query: 143 QDALQVFEQMRLYQL-KPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
Q AL+VFE + L P+ +L L + ++ +I R + V + +YN
Sbjct: 172 QRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTR-AEPTVGDRVQVYNA 230
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ--DKMER 259
++ S+S +A++L++ M ++G VPD+ ++NTLI+ K G L+++ D +
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRN 290
Query: 260 EGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQ 317
G+ D ++YN+L+ ++ + A ++F +++ P+ TY +I Y + +
Sbjct: 291 SGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAE 350
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
A ++ +E KG +P TYNS+L ++ ++ +M + D +T NT+I+
Sbjct: 351 AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH 410
Query: 378 AYSKIGDLKSALK-FKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
Y K G L AL+ +K+ SG PD TY LI K + A L+ MLD G
Sbjct: 411 MYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIK 470
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
P+ +YS ++ GY K + L G D Y ++ L + + A L
Sbjct: 471 PTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGL 530
Query: 497 FYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ M +G + +Y + K ++ + +M
Sbjct: 531 YRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 156/353 (44%), Gaps = 2/353 (0%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ YA+ + A +F M P + + +LL +L DG ++ + + L G
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMG 852
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
++ ++ A +++ ++ K++ + M+ G +P I Y +I L CK +A
Sbjct: 853 FKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAE 912
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGY 309
+ +ME +++ +NS++ + ++ +++ IK+ P+ TY TLI Y
Sbjct: 913 IMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMY 972
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
C+ ++ + + M GL P + TY S++ + + A +L E+ K ++ D
Sbjct: 973 CRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDR 1032
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
+T++ G A K M +G++P T L+ + + A+++L
Sbjct: 1033 SFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSN 1092
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
+ D + YS ++D Y + + ++ + E +GL D ++ +R
Sbjct: 1093 LKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVR 1145
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 150/317 (47%), Gaps = 3/317 (0%)
Query: 148 VFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACS 207
V E+++ K + ++L + + G V KI+ + G + I +Y +I
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 208 KSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIV 267
K + V A+ +++EMEE ++ +N+++ +Y + + + + +++ G+ D
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDET 963
Query: 268 SYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELM 325
+YN+LI +C++ R E + ++++ P TY +LI + K L+QA ++ E +
Sbjct: 964 TYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
Query: 326 EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDL 385
+KGL + Y+++++ G A KLL M ++ T + L+ +YS G+
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
+ A K + + ++ ++ Y ++I + + + S E L M G P + ++
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCF 1143
Query: 446 VDGYC-KKDNVDAILAL 461
V K+ ++ +L L
Sbjct: 1144 VRAASFSKEKIEVMLLL 1160
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 121/244 (49%), Gaps = 2/244 (0%)
Query: 194 LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
+ + I+N ++ + D ++ Q+ ++E G+ PD TYNTLI +YC+ E +
Sbjct: 925 VELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLL 984
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCK 311
+M G++ + +Y SLI F K+ + +A ++F E+ K + Y T++
Sbjct: 985 MQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRD 1044
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
+ +A K+ ++M+ G+ P +AT + ++ G ++A K+L+ + + +V+ +
Sbjct: 1045 SGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLP 1104
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
+++I+AY + D S ++ +M + GL+PD + + E LL +
Sbjct: 1105 YSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALE 1164
Query: 432 DAGF 435
D GF
Sbjct: 1165 DIGF 1168
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 130/270 (48%), Gaps = 4/270 (1%)
Query: 285 ATRMFSEIKDATPNHV-TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRK 343
A +F+ + + V Y ++ Y ++ + +A ++ + M +G P + ++N+++
Sbjct: 210 AVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINA 269
Query: 344 LCQDGRIRD--ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK 401
+ G + A +LL+ + ++ D IT NTL++A S+ +L A+K M +
Sbjct: 270 RLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQ 329
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL 461
PD +TY A+I + + A+ L + GF P +Y+ ++ + ++ N + + +
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEV 389
Query: 462 PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEG-NGISGDSVIYTSLAYAYW 520
+ G D Y +I K Q++ A +L+ M+G +G + D++ YT L +
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 521 KSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
K+ +T A+ ++ EM + T + YS
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSAL 479
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 177/443 (39%), Gaps = 37/443 (8%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ-D 190
L+ +A+ R T+ +V++QM+ ++ K G ++ +++K +
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA 250
G + Y LI + K+ A L++EM + G+ P + TY+ LI Y K G EA
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDA-TPNHVTYTTLIDG 308
M R G D ++Y+ ++ + R+A ++ + I D TP++ Y +I G
Sbjct: 493 EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILG 552
Query: 309 YCKANELDQALK-VRELMEAKGLYP--------------------GVATYN--------- 338
K N D K +R++ E G+ P VA N
Sbjct: 553 LMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTL 612
Query: 339 -SILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK--FKNKM 395
SIL GR +A +LL + E + + LI + K+ +L +AL F +
Sbjct: 613 LSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPC 672
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
+ Y+ L+H + A ++ + +G S +V YCK
Sbjct: 673 VHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFP 732
Query: 456 DAILALPDEFLSKGLCLDAS-VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTS 514
+ + ++ +KG S +Y +I K + + AE + ++ +G + D + S
Sbjct: 733 ETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNS 792
Query: 515 LAYAYWKSGKTSVASNVLEEMAK 537
L AY + G A + M +
Sbjct: 793 LMSAYAQCGCYERARAIFNTMMR 815
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/609 (22%), Positives = 256/609 (42%), Gaps = 61/609 (10%)
Query: 20 KGHWGNLL--KVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCS 77
+ HWG + ++N ++ + + +VL G +++ FF W Y H
Sbjct: 106 RNHWGPSVVSELNKLRRVTPSIVAEVLKL----GNDAAVAAKFFHWAGKQKGYKHDFAAY 161
Query: 78 WAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYA 137
A L + HF+ A Q+ + + + R+H D L ++Y
Sbjct: 162 NAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNR------RGLRVYY- 214
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
V+E+M+ + KP + ++ +L+K+G ++ +++ +DG+V
Sbjct: 215 ----------VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEEST 264
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
+ L+ K+ +E ++L M E PD+F Y +I +G +L + D+M
Sbjct: 265 TFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEM 324
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANEL 315
R+ I D+++Y +L+ G CK+GR+ +F E+K + Y LI+G+ ++
Sbjct: 325 RRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKV 384
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
A + E + G + YN++++ LC ++ A KL E++++ D T + +
Sbjct: 385 RSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPI 444
Query: 376 INAY-------------SKIGDLK--------------SALKFKNKM-------LESGLK 401
+ AY +IG+L A + KN M L++
Sbjct: 445 MVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGH 504
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL 461
Y L+ KM +++ + L + M GF P SYS + + +K +V A +
Sbjct: 505 GSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSF 564
Query: 462 PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAY-W 520
++ + + Y +L + LC+I +I+ L GN SG +L +
Sbjct: 565 HEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVC 624
Query: 521 KSGKTSVASNVLEEMAKRRLIITAKIY-SCFSVPDGHGENKVSQMFWDHVVERGLMSRNT 579
K V++EM + + I IY + S HG KV++ + + +R +M+
Sbjct: 625 KGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEAD 684
Query: 580 MRKIQQMLI 588
M ++MLI
Sbjct: 685 MVVYEEMLI 693
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 10/215 (4%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
++ +YN L+ A K D++++ L EM + G PD +Y+ I + +KG A S
Sbjct: 506 SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFH 565
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPNHVTYTTLIDGYCK 311
+K+ I +Y SL G C+ G + + E ++ P Y + CK
Sbjct: 566 EKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCK 625
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV--QADN 369
+ ++ +KV + M +G++ Y +I+ + + G I+ A ++ E+ ++KV +AD
Sbjct: 626 GSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADM 685
Query: 370 ITCNTLI--NAYSKIGDLK-SALKFKNKMLESGLK 401
+ ++ K DL S +KF LES L+
Sbjct: 686 VVYEEMLIEQTKKKTADLVLSGIKFFG--LESKLR 718
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 207/435 (47%), Gaps = 16/435 (3%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV--W- 181
S++ + L+ YA R +AL +M+ ++ L +V++ K G W
Sbjct: 343 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 402
Query: 182 ----KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+IHK LN IY +I+A ++ ++ERA+ L+ EMEE+G+ I Y+T+
Sbjct: 403 DEAKRIHK-------TLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTM 455
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP 297
+ Y + L + +++ G +V+Y LI + K G++ +A + +K+
Sbjct: 456 MDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGV 515
Query: 298 NH--VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
H TY+ +I+G+ K + A V E M +G+ P V YN+I+ C G + A +
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQ 575
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
+ EM + + + T +I+ Y+K GD++ +L+ + M G P T+ LI+G
Sbjct: 576 TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
+ ++E A E+L M AG + + +Y+ I+ GY + ++GL +D
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
Y AL++ CK +++ A + M I +S +Y L + + G A++++++M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 536 AKRRLIITAKIYSCF 550
K + Y+ F
Sbjct: 756 KKEGVKPDIHTYTSF 770
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 180/370 (48%), Gaps = 2/370 (0%)
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ KRL + G + Y CLI+ +K + +A ++ M+E+GV ++ TY+ +I+ +
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHV 300
K A ++ + M +EG+ D++ YN++I FC G M A + E++ P
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
T+ +I GY K+ ++ ++L+V ++M G P V T+N ++ L + ++ A ++L+EM
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
+ V A+ T ++ Y+ +GD A ++ ++ GL D FTY+AL+ CK +
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+SA + M + Y+ ++DG+ ++ +V L + +G+ D Y +
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
I K + A + ME G+ + YT+L + ++ A + EEM +
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 541 IITAKIYSCF 550
+Y C
Sbjct: 831 KPDKAVYHCL 840
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 182/369 (49%), Gaps = 4/369 (1%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y K AL+V M+ +K +L +++++ +K + + + +V++G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ ++ +YN +I A +++RA Q + EM++ P T+ +I Y K G +L
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGY 309
+ D M R G + ++N LI G ++ +M +A + E+ A + N TYT ++ GY
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
+ +A + ++ +GL + TY ++L+ C+ GR++ A + EMS + + ++
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
N LI+ +++ GD+ A +M + G+KPD TY + I K ++ A + +
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
M G P+ +Y+ ++ G+ + + L+ +E + G+ D +VY L+ L + +
Sbjct: 790 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL--LSR 847
Query: 490 IECAEKLFY 498
AE Y
Sbjct: 848 ASIAEAYIY 856
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 151/367 (41%), Gaps = 37/367 (10%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
+ ++ + D+ RA++ M +G+ P Y +LI Y EALS KM+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNH----------------- 299
EGI + +V+Y+ ++ GF K G A F E K T N
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 300 ------------------VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSIL 341
Y T++DGY + + L V + ++ G P V TY ++
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 342 RKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK 401
+ G+I A ++ M E+ V+ + T + +IN + K+ D +A M++ G+K
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL 461
PD Y +I FC M ++ A + + M P+ ++ I+ GY K ++ L +
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 462 PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWK 521
D G + LI L + Q+E A ++ M G+S + YT + Y
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 522 SGKTSVA 528
G T A
Sbjct: 672 VGDTGKA 678
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 15/231 (6%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
N + ++ YA T A + F +++ L + LL + K G +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
K + + N ++YN LI ++ DV A L+ +M+++GV PDI TY + IS K
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVT 301
G A ++ME G+ +I +Y +LI G+ + +A + E+K P+
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
Y L+ + +A +Y GV T I +++ + G I D
Sbjct: 837 YHCLLTSLLSRASIAEAY----------IYSGVMT---ICKEMVEAGLIVD 874
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
++ Y + GD+ A + +M G+ P Y +LIH + +++ A + M + G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
S +YS IV G+ K + +A DE L+AS+Y +I C+ +E AE
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVP 553
L ME GI IY ++ Y T VA K+ L++ ++ C P
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGY-----TMVADE------KKGLVVFKRLKECGFTP 482
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/307 (17%), Positives = 120/307 (39%), Gaps = 39/307 (12%)
Query: 293 KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
K + P+ + ++ Y + ++ +A + E M A+G+ P Y S++ + +
Sbjct: 303 KISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDE 362
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIG----------------------------- 383
A + +M E+ ++ +T + ++ +SK G
Sbjct: 363 ALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIY 422
Query: 384 ------DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
+++ A +M E G+ Y ++ G+ + + + + + + GFTP
Sbjct: 423 AHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
+ +Y +++ Y K + L + +G+ + Y +I K++ A +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 498 YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHG 557
M G+ D ++Y ++ A+ G A ++EM K R T + + +P HG
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF----MPIIHG 598
Query: 558 ENKVSQM 564
K M
Sbjct: 599 YAKSGDM 605
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 215/481 (44%), Gaps = 22/481 (4%)
Query: 56 ISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXX 115
+S FFK + + HS + + +LA + FK Q +L+++ +
Sbjct: 66 LSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKW----- 120
Query: 116 XRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
E V L+ ++ RM D+L + ++M+ L + +L +
Sbjct: 121 -------ESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRE-- 171
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
T+ +W ++K + N + Y+ ++ + + +E A L E K + P + ++N
Sbjct: 172 -TDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFN 226
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK-- 293
+++S YCK G A S + + G+ + S+N LI G C G + EA + S++
Sbjct: 227 SIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKH 286
Query: 294 DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
P+ VTY L G+ + A +V M KGL P V TY +L CQ G I
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMG 346
Query: 354 NKLLNEMSEKKVQADNIT-CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
LL +M + + ++I C+ +++ K G + AL N+M GL PD Y +IH
Sbjct: 347 LVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIH 406
Query: 413 GFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL 472
G CK+ + + A L M D P+ ++ ++ G C+K + +L D +S G L
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 473 DASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVL 532
D +Y +I K IE A +LF + GI+ + SL Y Y K+ + A +L
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 533 E 533
+
Sbjct: 527 D 527
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 212/474 (44%), Gaps = 50/474 (10%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N S +V + + +DA+ + P + + ++S K G ++
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+++ G+V ++Y +N LI+ + A +L ++M + GV PD TYN L +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 245 GMHYEALSIQDKMEREGINLDIVSY------------------------------NSLI- 273
GM A + M +G++ D+++Y NS+I
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 274 -----YGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELME 326
G CK GR+ EA +F+++K +P+ V Y+ +I G CK + D AL + + M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 327 AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLK 386
K + P T+ ++L LCQ G + +A LL+ + D + N +I+ Y+K G ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 387 SALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
AL+ ++E+G+ P T+ +LI+G+CK + A+++L + G PS SY+ ++
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 447 DGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE-----CAEKLF---- 497
D Y N +I L E ++G+ Y + + LC+ + E E++F
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
Query: 498 ---YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
ME GI D + Y ++ + S A LE M R L ++ Y+
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYN 659
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 198/423 (46%), Gaps = 15/423 (3%)
Query: 141 MTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI-Y 199
M A +V M L P + T+LL + G ++ + K ++ G LN I
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 200 NCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER 259
+ ++ K+ ++ A L N+M+ G+ PD+ Y+ +I CK G AL + D+M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 260 EGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQ 317
+ I + ++ +L+ G C++G + EA + + + T + V Y +IDGY K+ +++
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
AL++ +++ G+ P VAT+NS++ C+ I +A K+L+ + + ++ TL++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK----------MDE--LESAKE 425
AY+ G+ KS + + +M G+ P TY + G C+ + E E K+
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
L M G P +Y+ I+ C+ ++ + S+ L ++ Y LI LC
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAK 545
I A+ Y ++ +S YT+L A+ G +A + ++ R ++ +
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Query: 546 IYS 548
YS
Sbjct: 727 DYS 729
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 176/385 (45%), Gaps = 15/385 (3%)
Query: 123 EVNSQV-LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
E+NS + S ++ K+ +AL +F QM+ L P L A ++++ L K G ++
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++ + ++ N + L+ + + A+ LL+ + G DI YN +I Y
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNH 299
K G EAL + + GI + ++NSLIYG+CK + EA ++ IK P+
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
V+YTTL+D Y ++R M+A+G+ P TY+ I + LC+ + + N +L E
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Query: 360 ------------MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
M + + D IT NT+I ++ L A F M L TY
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 408 KALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
LI C + A ++ + + + S +Y+ ++ +C K + + + L + L
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718
Query: 468 KGLCLDASVYRALIRRLCKIEQIEC 492
+G + Y A+I RLC+ + C
Sbjct: 719 RGFNVSIRDYSAVINRLCRRHLMNC 743
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 182/366 (49%), Gaps = 14/366 (3%)
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL-SIQDK 256
+++ L+ S+ R V+ + +L +M+++ + +YN+++ + + ++ I+DK
Sbjct: 126 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK 185
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMF--SEIKDATPNHVTYTTLIDGYCKANE 314
E +Y++++ G C++ ++ +A SE KD P+ V++ +++ GYCK
Sbjct: 186 NEH--------TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+D A + GL P V ++N ++ LC G I +A +L ++M++ V+ D++T N
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
L + +G + A + ML+ GL PD TY L+ G C++ ++ LL ML G
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 435 FT-PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
F S S ++ G CK +D L+L ++ + GL D Y +I LCK+ + + A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVP 553
L+ M I +S + +L + G A ++L+ + + +Y+ V
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI--VI 475
Query: 554 DGHGEN 559
DG+ ++
Sbjct: 476 DGYAKS 481
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 215/481 (44%), Gaps = 22/481 (4%)
Query: 56 ISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXX 115
+S FFK + + HS + + +LA + FK Q +L+++ +
Sbjct: 66 LSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKW----- 120
Query: 116 XRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
E V L+ ++ RM D+L + ++M+ L + +L +
Sbjct: 121 -------ESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRE-- 171
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
T+ +W ++K + N + Y+ ++ + + +E A L E K + P + ++N
Sbjct: 172 -TDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFN 226
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK-- 293
+++S YCK G A S + + G+ + S+N LI G C G + EA + S++
Sbjct: 227 SIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKH 286
Query: 294 DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
P+ VTY L G+ + A +V M KGL P V TY +L CQ G I
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMG 346
Query: 354 NKLLNEMSEKKVQADNIT-CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
LL +M + + ++I C+ +++ K G + AL N+M GL PD Y +IH
Sbjct: 347 LVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIH 406
Query: 413 GFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL 472
G CK+ + + A L M D P+ ++ ++ G C+K + +L D +S G L
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 473 DASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVL 532
D +Y +I K IE A +LF + GI+ + SL Y Y K+ + A +L
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 533 E 533
+
Sbjct: 527 D 527
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 212/474 (44%), Gaps = 50/474 (10%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N S +V + + +DA+ + P + + ++S K G ++
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+++ G+V ++Y +N LI+ + A +L ++M + GV PD TYN L +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 245 GMHYEALSIQDKMEREGINLDIVSY------------------------------NSLI- 273
GM A + M +G++ D+++Y NS+I
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 274 -----YGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELME 326
G CK GR+ EA +F+++K +P+ V Y+ +I G CK + D AL + + M
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 327 AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLK 386
K + P T+ ++L LCQ G + +A LL+ + D + N +I+ Y+K G ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 387 SALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
AL+ ++E+G+ P T+ +LI+G+CK + A+++L + G PS SY+ ++
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 447 DGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE-----CAEKLF---- 497
D Y N +I L E ++G+ Y + + LC+ + E E++F
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
Query: 498 ---YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
ME GI D + Y ++ + S A LE M R L ++ Y+
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYN 659
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 198/423 (46%), Gaps = 15/423 (3%)
Query: 141 MTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI-Y 199
M A +V M L P + T+LL + G ++ + K ++ G LN I
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC 366
Query: 200 NCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER 259
+ ++ K+ ++ A L N+M+ G+ PD+ Y+ +I CK G AL + D+M
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 260 EGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQ 317
+ I + ++ +L+ G C++G + EA + + + T + V Y +IDGY K+ +++
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
AL++ +++ G+ P VAT+NS++ C+ I +A K+L+ + + ++ TL++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK----------MDE--LESAKE 425
AY+ G+ KS + + +M G+ P TY + G C+ + E E K+
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
L M G P +Y+ I+ C+ ++ + S+ L ++ Y LI LC
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC 666
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAK 545
I A+ Y ++ +S YT+L A+ G +A + ++ R ++ +
Sbjct: 667 VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIR 726
Query: 546 IYS 548
YS
Sbjct: 727 DYS 729
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 176/385 (45%), Gaps = 15/385 (3%)
Query: 123 EVNSQV-LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
E+NS + S ++ K+ +AL +F QM+ L P L A ++++ L K G ++
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++ + ++ N + L+ + + A+ LL+ + G DI YN +I Y
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNH 299
K G EAL + + GI + ++NSLIYG+CK + EA ++ IK P+
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
V+YTTL+D Y ++R M+A+G+ P TY+ I + LC+ + + N +L E
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598
Query: 360 ------------MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
M + + D IT NT+I ++ L A F M L TY
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Query: 408 KALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
LI C + A ++ + + + S +Y+ ++ +C K + + + L + L
Sbjct: 659 NILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLH 718
Query: 468 KGLCLDASVYRALIRRLCKIEQIEC 492
+G + Y A+I RLC+ + C
Sbjct: 719 RGFNVSIRDYSAVINRLCRRHLMNC 743
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 182/366 (49%), Gaps = 14/366 (3%)
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL-SIQDK 256
+++ L+ S+ R V+ + +L +M+++ + +YN+++ + + ++ I+DK
Sbjct: 126 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK 185
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMF--SEIKDATPNHVTYTTLIDGYCKANE 314
E +Y++++ G C++ ++ +A SE KD P+ V++ +++ GYCK
Sbjct: 186 NEH--------TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+D A + GL P V ++N ++ LC G I +A +L ++M++ V+ D++T N
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
L + +G + A + ML+ GL PD TY L+ G C++ ++ LL ML G
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 435 FT-PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
F S S ++ G CK +D L+L ++ + GL D Y +I LCK+ + + A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVP 553
L+ M I +S + +L + G A ++L+ + + +Y+ V
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI--VI 475
Query: 554 DGHGEN 559
DG+ ++
Sbjct: 476 DGYAKS 481
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 197/434 (45%), Gaps = 42/434 (9%)
Query: 40 IHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDK 99
+H + +LS P + FKW E P +T S +++ L K + F+ A ++
Sbjct: 104 VHALFDRLS---SSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLV-- 158
Query: 100 IAHRDFXXXXXXXXXXXRIHDDPE---VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQ 156
R+ D V++ L+ YA++ M Q A++ FE R Y+
Sbjct: 159 ---------------FDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYE 203
Query: 157 LKPHLPACT---------VLLSSLLKDGTTNVVWKIHKRL---VQDGVVLNIYIYNCLIH 204
P C VLL +L K+G +R+ + V ++ I+N L++
Sbjct: 204 -----PVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLN 258
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
+SR +++A++L EM+ V P + TY TLI YC+ A+ + ++M+ + +
Sbjct: 259 GWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEI 318
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTYTTLIDGYCKANELDQALKVR 322
+ + +N +I G + GR+ EA M + ++ P VTY +L+ +CKA +L A K+
Sbjct: 319 NFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKIL 378
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
++M +G+ P TYN + + + + L ++ E D +T + ++ +
Sbjct: 379 KMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCED 438
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSY 442
G L A++ +M G+ PD T LIH C+++ LE A E + G P Y ++
Sbjct: 439 GKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF 498
Query: 443 SWIVDGYCKKDNVD 456
I +G K D
Sbjct: 499 KMIDNGLRSKGMSD 512
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 153/330 (46%), Gaps = 19/330 (5%)
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLD------IVSYNSLIYGFCKEGRMREATRMFS 290
L+ CK+G H S+ +ER G +D + +N L+ G+ + ++++A +++
Sbjct: 218 LLDALCKEG-HVREASMY--LERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWE 274
Query: 291 EIK--DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
E+K + P VTY TLI+GYC+ + A++V E M+ + +N I+ L + G
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
R+ +A ++ + +T N+L+ + K GDL A K M+ G+ P TY
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 409 ALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSK 468
F K ++ E L F +++AG +P +Y I+ C+ + + + E ++
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 469 GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
G+ D LI LC++E +E A + F + GI Y +K +
Sbjct: 455 GIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQ--------YITFKMIDNGLR 506
Query: 529 SNVLEEMAKRRLIITAKIYSCFSVPDGHGE 558
S + +MAKR + + + +P+ + E
Sbjct: 507 SKGMSDMAKRLSSLMSSLPHSKKLPNTYRE 536
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM---EEKGVVPDIFTYNTLISLYCKK 244
++ G L+ +++ ++++ K+R+ E A L+ + +E + T+ LI Y +
Sbjct: 127 MKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARA 186
Query: 245 GMHYEALSI------QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI-----K 293
GM +A+ + + + L ++ L+ CKEG +REA+ I
Sbjct: 187 GMVQQAIRAFEFARSYEPVCKSATELRLLEV--LLDALCKEGHVREASMYLERIGGTMDS 244
Query: 294 DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
+ P+ + L++G+ ++ +L QA K+ E M+A + P V TY +++ C+ R++ A
Sbjct: 245 NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIA 304
Query: 354 NKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML--ESGLKPDPFTYKALI 411
++L EM +++ + + N +I+ + G L AL + ESG P TY +L+
Sbjct: 305 MEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESG--PTIVTYNSLV 362
Query: 412 HGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC 471
FCK +L A ++L M+ G P+ +Y+ + K + + + L + + G
Sbjct: 363 KNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHS 422
Query: 472 LDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAY 517
D Y +++ LC+ ++ A ++ M+ GI D + T L +
Sbjct: 423 PDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIH 468
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 192/444 (43%), Gaps = 41/444 (9%)
Query: 29 VNNAPVLSSTTIHQVLLQLSLNGYGPSISFP---FFKWVESTPHYTHSLQCSWAMIQILA 85
V +P +SS + QVL + ++ FP FF W P + HSL+ +++IL
Sbjct: 60 VAYSPRVSSNLVEQVLKRCK------NLGFPAHRFFLWARRIPDFAHSLESYHILVEILG 113
Query: 86 KYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIH-YAKSRMTQD 144
K F L I R++ E++S+V W+V Y+++ + +
Sbjct: 114 SSKQFALLWDFL--IEAREYNYF--------------EISSKVF-WIVFRAYSRANLPSE 156
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A + F +M + +KP + LL SL N + + G+V + Y+ L+
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVR 216
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
++ RD A+++ +EM E+ V D+ YN L+ CK G + +M G+
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVR 322
D S+ I+ +C G + A ++ +K D PN T+ +I CK ++D A +
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
+ M KG P TYNSI+ C + A KLL+ M K D T N ++ +I
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFC-KMDELESAKELLFGMLDAGFTPSYCS 441
G A + M E P TY +IHG K +LE A M+D G P
Sbjct: 397 GRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP---- 452
Query: 442 YSWIVD-------GYCKKDNVDAI 458
YS V+ G+ + D VD +
Sbjct: 453 YSTTVEMLRNRLVGWGQMDVVDVL 476
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN---KLLNEMS 361
L+ C ++ A + + G+ P TY+ ++R RIRDA+ K+ +EM
Sbjct: 179 LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGW---ARIRDASGARKVFDEML 235
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
E+ D + N L++A K GD+ K +M GLKPD +++ IH +C ++
Sbjct: 236 ERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVH 295
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
SA ++L M P+ +++ I+ CK + VD L DE + KG D Y +++
Sbjct: 296 SAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Query: 482 RRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
C ++ A KL M+ D Y + + G+ A+ + E M++R+
Sbjct: 356 AYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
Query: 542 ITAKIYS 548
T Y+
Sbjct: 416 PTVATYT 422
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 11/258 (4%)
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
Y +AN +A + M G+ P V + +L LC + A + + +
Sbjct: 147 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 206
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
T + L+ +++I D A K ++MLE D Y AL+ CK +++ ++
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 266
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M + G P S++ + YC +V + + D L + + +I+ LCK
Sbjct: 267 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 326
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
E+++ A L M G + D+ Y S+ + + + A+ +L M + + +
Sbjct: 327 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL------ 380
Query: 548 SCFSVPDGHGENKVSQMF 565
PD H N V ++
Sbjct: 381 -----PDRHTYNMVLKLL 393
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%)
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+ AYS+ A + N+M+E G+KP L+H C + A+E G
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFG 203
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
PS +YS +V G+ + + + DE L + +D Y AL+ LCK ++
Sbjct: 204 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 263
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
K+F M G+ D+ + +AY +G A VL+ M + L+
Sbjct: 264 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLV 310
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 191/375 (50%), Gaps = 4/375 (1%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
T L++ L++ G I L+++G ++ Y L+ A ++ + L++++E+
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
G+ PD +N +I+ + G +A+ I +KM+ G ++N+LI G+ K G++ E
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 285 ATRMFSE-IKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSIL 341
++R+ ++D PN T L+ +C ++++A + M++ G+ P V T+N++
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 342 RKLCQDGRIRDA-NKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGL 400
+ + G A + ++ M KV+ + TC T++N Y + G ++ AL+F +M E G+
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 401 KPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILA 460
P+ F + +LI GF +++++ E++ M + G P ++S +++ + ++
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 461 LPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYW 520
+ + L G+ D + L + + + E AE++ M G+ + VIYT + +
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Query: 521 KSGKTSVASNVLEEM 535
+G+ A V ++M
Sbjct: 683 SAGEMKKAMQVYKKM 697
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 193/406 (47%), Gaps = 46/406 (11%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
Q+A +F + KP L T L+++L + + + + ++ ++G+ + ++N +
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD------- 255
I+A S+S ++++A ++ +M+E G P T+NTLI Y K G E+ + D
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 256 -----------------------------KMEREGINLDIVSYNSLIYGFCKEGRMREAT 286
KM+ G+ D+V++N+L + + G A
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 287 RMF------SEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSI 340
M +++K PN T T+++GYC+ ++++AL+ M+ G++P + +NS+
Sbjct: 516 DMIIPRMLHNKVK---PNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 341 LRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGL 400
++ + ++++ M E V+ D +T +TL+NA+S +GD+K + MLE G+
Sbjct: 573 IKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Query: 401 KPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILA 460
PD + L G+ + E E A+++L M G P+ Y+ I+ G+C + +
Sbjct: 633 DPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQ 692
Query: 461 LPDEFLS-KGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
+ + GL + + Y LI + +Q AE+L MEG +
Sbjct: 693 VYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNV 738
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 175/340 (51%), Gaps = 4/340 (1%)
Query: 213 ERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSL 272
+ A + N + E+G P + TY TL++ ++ + LS+ K+E+ G+ D + +N++
Sbjct: 336 QEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 273 IYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELM-EAKG 329
I + G + +A ++F ++K++ P T+ TLI GY K +L+++ ++ ++M +
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 330 LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
L P T N +++ C +I +A ++ +M V+ D +T NTL AY++IG +A
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 390 KFK-NKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
+ML + +KP+ T +++G+C+ ++E A + M + G P+ ++ ++ G
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 449 YCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGD 508
+ +++D + + D G+ D + L+ + ++ E+++ M GI D
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 509 SVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
++ LA Y ++G+ A +L +M K + IY+
Sbjct: 636 IHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYT 675
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 160/345 (46%), Gaps = 40/345 (11%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVV-LNIYIYNCLI 203
A+++FE+M+ KP L+ K G ++ +++D ++ N N L+
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS-IQDKMEREGI 262
A R +E A ++ +M+ GV PD+ T+NTL Y + G A I +M +
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALK 320
++ + +++ G+C+EG+M EA R F +K+ PN + +LI G+ N++D +
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 321 VRELMEAKGLYPGVATYNSILR--------KLCQD------------------------- 347
V +LME G+ P V T+++++ K C++
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYA 647
Query: 348 --GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLE-SGLKPDP 404
G A ++LN+M + V+ + + +I+ + G++K A++ KM GL P+
Sbjct: 648 RAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNL 707
Query: 405 FTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGY 449
TY+ LI GF + + A+ELL M P+ + I DG+
Sbjct: 708 TTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 134/298 (44%), Gaps = 39/298 (13%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQ---------------------------- 156
N + + LV + R ++A + +M+ Y
Sbjct: 459 NDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI 518
Query: 157 --------LKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSK 208
+KP++ C +++ ++G + R+ + GV N++++N LI
Sbjct: 519 IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
Query: 209 SRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVS 268
D++ ++++ MEE GV PD+ T++TL++ + G I M GI+ DI +
Sbjct: 579 INDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHA 638
Query: 269 YNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKV-RELM 325
++ L G+ + G +A ++ ++++ PN V YT +I G+C A E+ +A++V +++
Sbjct: 639 FSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMC 698
Query: 326 EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
GL P + TY +++ + + A +LL +M K V T + + + IG
Sbjct: 699 GIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+H+ + N + +V Y + ++AL+ F +M+ + P+L L+ L
Sbjct: 523 LHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDM 582
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ V ++ + + GV ++ ++ L++A S D++R +++ +M E G+ PDI ++ L
Sbjct: 583 DGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE---IKD 294
Y + G +A I ++M + G+ ++V Y +I G+C G M++A +++ + I
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVG 702
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP 332
+PN TY TLI G+ +A + +A ++ + ME K + P
Sbjct: 703 LSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 113/229 (49%), Gaps = 8/229 (3%)
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
V + ++ L + GR ++A+ + N + E+ + IT TL+ A ++ S L +
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLIS 378
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
K+ ++GLKPD + A+I+ + L+ A ++ M ++G P+ +++ ++ GY K
Sbjct: 379 KVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 454 NVDAILALPDEFL-SKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
++ L D L + L + L++ C +IE A + Y M+ G+ D V +
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 513 TSLAYAYWKSGKTSVASNVLEEMAKRRLI---ITAKIYSCFSVPDGHGE 558
+LA AY + G T A E+M R++ + + +C ++ +G+ E
Sbjct: 499 NTLAKAYARIGSTCTA----EDMIIPRMLHNKVKPNVRTCGTIVNGYCE 543
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/535 (22%), Positives = 209/535 (39%), Gaps = 90/535 (16%)
Query: 55 SISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXX 114
++ FFKW ++ H +I+ L + + + + + ++ +
Sbjct: 107 NVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVS------- 159
Query: 115 XXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKD 174
V+ VLS LV +++M AL VF Q + + KP ++ L+++
Sbjct: 160 ---------VSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQE 210
Query: 175 GTTNVVWKIHKRLVQDG----------VVLNIY--------------------------I 198
G V +++ + +G +++ Y I
Sbjct: 211 GQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI 270
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y L+ K VE+A L EM+ G P ++TY LI K G EA M
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML 330
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEI-------------------------- 292
R+G+ D+V N+L+ K GR+ E T +FSE+
Sbjct: 331 RDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHV 390
Query: 293 ------------KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSI 340
+P+ TY+ LIDGYCK N +++AL + E M+ KG P A Y S+
Sbjct: 391 SEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 450
Query: 341 LRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGL 400
+ L + R AN+L E+ E + +I + K G L A+ N+M G
Sbjct: 451 INALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS 510
Query: 401 KPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILA 460
PD + Y AL+ G K + A LL M + G S++ I++G+ + +
Sbjct: 511 GPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIE 570
Query: 461 LPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+ + G+ D Y L+ E A ++ M+ G D++ Y+S+
Sbjct: 571 MFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSI 625
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 164/368 (44%), Gaps = 41/368 (11%)
Query: 127 QVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKR 186
++ + L+ Y K + AL +FE+M+ P + T L+ L K G + + +K
Sbjct: 269 KIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKD 328
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM--------------------EEKG 226
+++DG+ ++ N L++ K VE + +EM E K
Sbjct: 329 MLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKA 388
Query: 227 ----------------VVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYN 270
V P FTY+ LI YCK +AL + ++M+ +G +Y
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 271 SLIYGFCKEGRMREATRMFSEIKDATPN--HVTYTTLIDGYCKANELDQALKVRELMEAK 328
SLI K R A +F E+K+ N Y +I + K +L +A+ + M+ +
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSA 388
G P V YN+++ + + G I +AN LL +M E +AD + N ++N +++ G + A
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 389 LKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
++ + SG+KPD TY L+ F E A ++ M D GF +YS I+D
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Query: 449 YCKKDNVD 456
NVD
Sbjct: 629 V---GNVD 633
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 82/150 (54%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
V+S+V + ++ H+ K +A+ +F +M+ P + A L+S ++K G N +
Sbjct: 477 VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
+++ ++G +I +N +++ +++ RA ++ ++ G+ PD TYNTL+ +
Sbjct: 537 LRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAH 596
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLI 273
GM EA + +M+ +G D ++Y+S++
Sbjct: 597 AGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 96/246 (39%), Gaps = 34/246 (13%)
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+ L+ +A + +AL V + + P +TYNS++ L Q+G+ +++ EM
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM-- 223
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
CN E PD TY ALI + K+ +S
Sbjct: 224 ---------CN-----------------------EGDCFPDTITYSALISSYEKLGRNDS 251
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
A L M D P+ Y+ ++ Y K V+ L L +E G Y LI+
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311
Query: 483 RLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLII 542
L K +++ A + M +G++ D V +L K G+ +NV EM R
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP 371
Query: 543 TAKIYS 548
T Y+
Sbjct: 372 TVVSYN 377
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 153/286 (53%), Gaps = 2/286 (0%)
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNH--VTYTTLIDGYCKAN 313
KM + GI DIV+ +SL+ GFC +++A + +++ V T LID CK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
+ AL+V + M+ +G+ P V TY+S++ LC+ GR+ DA + L+EM KK+ + IT +
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
LI+AY+K G L M++ + P+ FTY +LI+G C + ++ A ++L M+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
G TP+ +YS + +G+ K VD + L D+ +G+ + LI+ + +I+ A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
+F +M NG+ + Y + + +G+ A + E M K R
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTR 288
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 161/298 (54%), Gaps = 4/298 (1%)
Query: 157 LKPHLPACTVLLSSL-LKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERA 215
++P + + L++ L + + V+ + ++ + G+ ++ + LI K+R V A
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVY-VAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 216 KQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYG 275
++L M+++G+ P++ TY++LI+ CK G +A +M+ + IN +++++++LI
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 276 FCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPG 333
+ K G++ + ++ + + PN TY++LI G C N +D+A+K+ +LM +KG P
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
V TY+++ + R+ D KLL++M ++ V A+ ++CNTLI Y + G + AL
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK 451
M +GL P+ +Y ++ G E+E A M +Y+ ++ G CK
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCK 305
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 167/340 (49%), Gaps = 2/340 (0%)
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
++++ G+ +I + L++ S ++ A + +ME+ G+ D+ LI CK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYT 303
+ AL + +M+ GI+ ++V+Y+SLI G CK GR+ +A R E+ K PN +T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 304 TLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
LID Y K +L + V ++M + P V TY+S++ LC R+ +A K+L+ M K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
+ +T +TL N + K + +K + M + G+ + + LI G+ + +++ A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
+ M G P+ SY+ ++ G V+ L+ + LD Y +I
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
+CK ++ A LFY ++ + D YT + ++G
Sbjct: 303 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 164/319 (51%), Gaps = 2/319 (0%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S LV + S +DA+ V QM +K + T+L+ +L K+ ++ KR+
Sbjct: 17 SSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKD 76
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
G+ N+ Y+ LI KS + A++ L+EM+ K + P++ T++ LI Y K+G +
Sbjct: 77 RGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSK 136
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLID 307
S+ M + I+ ++ +Y+SLIYG C R+ EA +M + K TPN VTY+TL +
Sbjct: 137 VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLAN 196
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
G+ K++ +D +K+ + M +G+ + N++++ Q G+I A + M+ +
Sbjct: 197 GFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP 256
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
+ + N ++ G+++ AL M ++ D TY +IHG CK ++ A +L
Sbjct: 257 NIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLF 316
Query: 428 FGMLDAGFTPSYCSYSWIV 446
+ + P + +Y+ ++
Sbjct: 317 YKLKFKRVEPDFKAYTIMI 335
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 121/246 (49%), Gaps = 2/246 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N S L+ KS DA + +M ++ P++ + L+ + K G + V ++
Sbjct: 82 NVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVY 141
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
K ++Q + N++ Y+ LI+ V+ A ++L+ M KG P++ TY+TL + + K
Sbjct: 142 KMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKS 201
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTY 302
+ + + D M + G+ + VS N+LI G+ + G++ A +F + PN +Y
Sbjct: 202 SRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSY 261
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
++ G E+++AL E M+ + TY ++ +C+ +++A L ++
Sbjct: 262 NIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKF 321
Query: 363 KKVQAD 368
K+V+ D
Sbjct: 322 KRVEPD 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 117 RIH--DDPEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLL 172
R+H D ++N V+++ L+ YAK V++ M + P++ + L+ L
Sbjct: 105 RLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLC 164
Query: 173 KDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIF 232
+ K+ ++ G N+ Y+ L + KS V+ +LL++M ++GV +
Sbjct: 165 MHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTV 224
Query: 233 TYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI 292
+ NTLI Y + G AL + M G+ +I SYN ++ G G + +A F +
Sbjct: 225 SCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Query: 293 KDATPNH--VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
+ + +TYT +I G CKA + +A + ++ K + P Y ++ +L + G +
Sbjct: 285 QKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG-M 343
Query: 351 RDANKLLNEMSEKKVQ 366
R LN +K V+
Sbjct: 344 RTEADALNRFYQKHVR 359
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 134/241 (55%), Gaps = 2/241 (0%)
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
Q + ++ I ++ K + A+ L EM EKG+ P++ TYN +I +C G
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLI 306
+A + M + IN DIV++++LI F KE ++ EA ++ E+ + P +TY ++I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
DG+CK + +D A ++ + M +KG P V T+++++ C+ R+ + ++ EM + +
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
A+ +T TLI+ + ++GDL +A N+M+ G+ PD T+ ++ G C EL A +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 427 L 427
L
Sbjct: 243 L 243
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 133/246 (54%), Gaps = 2/246 (0%)
Query: 222 MEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGR 281
M + + D+ ++ CK G H A ++ +M +GI ++++YN +I FC GR
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 282 MREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNS 339
+A ++ + K P+ VT++ LI+ + K ++ +A ++ + M ++P TYNS
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
++ C+ R+ DA ++L+ M+ K D +T +TLIN Y K + + ++ +M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAIL 459
+ + TY LIHGFC++ +L++A++LL M+ G P Y ++ ++ G C K +
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 460 ALPDEF 465
A+ ++
Sbjct: 241 AILEDL 246
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 119/238 (50%)
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
V T ++D CK A + M KG++P V TYN ++ C GR DA++LL
Sbjct: 11 VISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRH 70
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
M EK++ D +T + LINA+ K + A + +ML + P TY ++I GFCK D
Sbjct: 71 MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 130
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
++ AK +L M G +P ++S +++GYCK VD + + E +G+ + Y
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
LI C++ ++ A+ L M G++ D + + + + A +LE++ K
Sbjct: 191 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 122/236 (51%), Gaps = 2/236 (0%)
Query: 156 QLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERA 215
+K + T ++ L KDG + + + G+ N+ YNC+I + S A
Sbjct: 5 HIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDA 64
Query: 216 KQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYG 275
QLL M EK + PDI T++ LI+ + K+ EA I +M R I ++YNS+I G
Sbjct: 65 DQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDG 124
Query: 276 FCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPG 333
FCK+ R+ +A RM + K +P+ VT++TLI+GYCKA +D +++ M +G+
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
TY +++ CQ G + A LLNEM V D IT + ++ +L+ A
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 20/249 (8%)
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
V +I+ +LC+DG +A L EM EK + + +T N +I+++ G A +
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
M+E + PD T+ ALI+ F K ++ A+E+ ML P+ +Y+ ++DG+CK+D
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
VD + D SKG D + LI CK ++++ ++F M GI ++V YT
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 189
Query: 514 SLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVERG 573
+L + + + G A ++L EM SC PD H + G
Sbjct: 190 TLIHGFCQVGDLDAAQDLLNEM-----------ISCGVAPD---------YITFHCMLAG 229
Query: 574 LMSRNTMRK 582
L S+ +RK
Sbjct: 230 LCSKKELRK 238
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 119/236 (50%), Gaps = 2/236 (0%)
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANE 314
M + I D+V +++ CK+G A +F+E+ K PN +TY +ID +C +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
A ++ M K + P + T+++++ ++ ++ +A ++ EM + IT N+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+I+ + K + A + + M G PD T+ LI+G+CK +++ E+ M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
+ +Y+ ++ G+C+ ++DA L +E +S G+ D + ++ LC +++
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 236
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 117/223 (52%), Gaps = 2/223 (0%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A +F +M + P++ ++ S G + ++ + +++ + +I ++ LI
Sbjct: 28 NAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALI 87
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
+A K R V A+++ EM + P TYN++I +CK+ +A + D M +G +
Sbjct: 88 NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCS 147
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKV 321
D+V++++LI G+CK R+ +F E+ + N VTYTTLI G+C+ +LD A +
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 207
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
M + G+ P T++ +L LC +R A +L ++ + +
Sbjct: 208 LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
++ + S DA Q+ M Q+ P + + L+++ +K+ + +I+K +++
Sbjct: 51 MIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWS 110
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ YN +I K V+ AK++L+ M KG PD+ T++TLI+ YCK +
Sbjct: 111 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 170
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGY 309
I +M R GI + V+Y +LI+GFC+ G + A + +E+ P+++T+ ++ G
Sbjct: 171 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Query: 310 CKANELDQALKVRELME 326
C EL +A + E ++
Sbjct: 231 CSKKELRKAFAILEDLQ 247
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/182 (18%), Positives = 91/182 (50%), Gaps = 2/182 (1%)
Query: 121 DPEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
+ ++N ++++ L+ + K R +A +++++M + + P ++ K +
Sbjct: 73 EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVD 132
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
++ + G ++ ++ LI+ K++ V+ ++ EM +G+V + TY TLI
Sbjct: 133 DAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPN 298
+C+ G A + ++M G+ D ++++ ++ G C + +R+A + +++ + +
Sbjct: 193 HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDH 252
Query: 299 HV 300
H+
Sbjct: 253 HL 254
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 198/442 (44%), Gaps = 23/442 (5%)
Query: 36 SSTTIHQVLLQLSLN--GYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTA 93
S + L++ LN G ++ + FF W P Y HS++ +M++IL+K + F
Sbjct: 107 SGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAV 166
Query: 94 QQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMR 153
+++++ R + + ++ LV +A + M + A++V ++M
Sbjct: 167 WGLIEEM----------------RKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMP 210
Query: 154 LYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVE 213
+ +P LL +L K G+ K+ + + V N+ + L++ + +
Sbjct: 211 KFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFTSLLYGWCRVGKMM 269
Query: 214 RAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLI 273
AK +L +M E G PDI Y L+S Y G +A + M R G + Y LI
Sbjct: 270 EAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLI 329
Query: 274 YGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLY 331
CK RM EA ++F E++ + + VTYT L+ G+CK ++D+ V + M KGL
Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 389
Query: 332 PGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
P TY I+ + + +L+ +M + + D N +I K+G++K A++
Sbjct: 390 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Query: 392 KNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF--TPSYCSYSWIVDGY 449
N+M E+GL P T+ +I+G L A + M+ G Y + +++
Sbjct: 450 WNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTV 509
Query: 450 CKKDNVDAILALPDEFLSKGLC 471
K ++ + SKG C
Sbjct: 510 LKDKKLEMAKDVWSCITSKGAC 531
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 169/355 (47%), Gaps = 6/355 (1%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKG---VVPDIFTYNTLISLYCKKGMHYEAL 251
+I +Y ++ SK R L+ EM ++ + P++F L+ + M +A+
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRFASADMVKKAI 203
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTY-TTLIDGYC 310
+ D+M + G D + L+ CK G +++A ++F +++ P ++ Y T+L+ G+C
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWC 263
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
+ ++ +A V M G P + Y ++L G++ DA LL +M + + +
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN 323
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
LI A K+ ++ A+K +M + D TY AL+ GFCK +++ +L M
Sbjct: 324 CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDM 383
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
+ G PS +Y I+ + KK++ + L L ++ D +Y +IR CK+ ++
Sbjct: 384 IKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEV 443
Query: 491 ECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAK 545
+ A +L+ ME NG+S + + G AS+ +EM R L ++
Sbjct: 444 KEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQ 498
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 3/209 (1%)
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK-FKNKMLES 398
++++ ++ A ++L+EM + + D L++A K G +K A K F++ +
Sbjct: 189 LVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRF 248
Query: 399 GLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAI 458
+ FT +L++G+C++ ++ AK +L M +AGF P Y+ ++ GY +
Sbjct: 249 PVNLRYFT--SLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306
Query: 459 LALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
L + +G +A+ Y LI+ LCK++++E A K+F ME D V YT+L
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
Query: 519 YWKSGKTSVASNVLEEMAKRRLIITAKIY 547
+ K GK VL++M K+ L+ + Y
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTY 395
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 142/301 (47%), Gaps = 7/301 (2%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ YA + DA + MR +P+ TVL+ +L K K+ + +
Sbjct: 293 LLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYE 352
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
++ Y L+ K +++ +L++M +KG++P TY ++ + KK E L
Sbjct: 353 CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECL 412
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGY 309
+ +KM + + DI YN +I CK G ++EA R+++E+++ +P T+ +I+G
Sbjct: 413 ELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNS---ILRKLCQDGRIRDANKLLNEMSEKKVQ 366
L +A + M +GL+ V+ Y + +L + +D ++ A + + ++ K
Sbjct: 473 ASQGCLLEASDHFKEMVTRGLF-SVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGAC 531
Query: 367 ADNITCNTL-INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
N+ T+ I+A G K A + +M+E P P T+ L+ G K+ E A E
Sbjct: 532 ELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGE 591
Query: 426 L 426
+
Sbjct: 592 I 592
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV-DAILAL 461
+P + L+ F D ++ A E+L M GF P + ++D CK +V DA
Sbjct: 182 EPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLF 241
Query: 462 PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWK 521
D + ++ + +L+ C++ ++ A+ + M G D V YT+L Y
Sbjct: 242 ED--MRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYAN 299
Query: 522 SGKTSVASNVLEEMAKRRLIITAKIYS 548
+GK + A ++L +M +R A Y+
Sbjct: 300 AGKMADAYDLLRDMRRRGFEPNANCYT 326
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 184/377 (48%), Gaps = 41/377 (10%)
Query: 132 LVIHYAKSRMTQDALQVFEQMR-LYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQD 190
L+ H+++S + +++F ++ + ++KP L A + L+ L+ G N+ K+ +
Sbjct: 130 LMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHN 189
Query: 191 -GVVLNIYIYNCLIHACSKSRDVERAKQLLNEME-------------------------- 223
G+ N I+N L+ K+ D+ A ++ EM+
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 224 -----------EKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSL 272
++G+ PD T+N +I+ +C+ G A I D M++ G N ++ +Y++L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 273 IYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGL 330
+ GFCK G+++EA + F E+K + V YTTL++ +C+ E D+A+K+ M+A
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 331 YPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK 390
TYN ILR L +GR +A ++L++ + V + + ++NA G+L+ A+K
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVK 429
Query: 391 FKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYC 450
F + M E G+ P T+ L+ C+ E +L G L G P S+ +V+ C
Sbjct: 430 FLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESIC 489
Query: 451 KKDNVDAILALPDEFLS 467
K+ + + L D +S
Sbjct: 490 KERKLVHVFELLDSLVS 506
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 158/336 (47%), Gaps = 11/336 (3%)
Query: 208 KSRDVERAKQLLNEM-EEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDI 266
+ RD + + N+ ++KG + TY+ L+ + +I +M+ E
Sbjct: 65 RERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQE 124
Query: 267 VSYNSLIYGFCKEGRMREATRMFSEIK---DATPNHVTYTTLIDGYCKANELDQALKVRE 323
+ +L+ F + + MF+ I+ P+ +T ++ + E++ + K+
Sbjct: 125 SLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKL-- 182
Query: 324 LMEAK---GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN-ITCNTLINAY 379
L+ AK GL P +N +++ C++G I A ++ EM + N IT +TL++
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 380 SKIGDLKSALK-FKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPS 438
K A++ F++ + + G+ PDP T+ +I+GFC+ E+E AK++L M G P+
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 439 YCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFY 498
+YS +++G+CK + DE GL LD Y L+ C+ + + A KL
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 499 HMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
M+ + D++ Y + G++ A +L++
Sbjct: 363 EMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 99/233 (42%), Gaps = 37/233 (15%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S L+ + K Q+A Q F++++ LK T L++ ++G T
Sbjct: 307 SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGET------------ 354
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
+ A +LL EM+ D TYN ++ +G E
Sbjct: 355 -----------------------DEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEE 391
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLID 307
AL + D+ EG++L+ SY ++ C G + +A + S + + P+H T+ L+
Sbjct: 392 ALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVV 451
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
C++ + ++V GL PG ++ +++ +C++ ++ +LL+ +
Sbjct: 452 RLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 150/299 (50%), Gaps = 3/299 (1%)
Query: 155 YQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVER 214
+ + P++ C +L+ +L K +K+ + G+V N+ Y ++ D+E
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 215 AKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIY 274
AK++L EM ++G PD TY L+ YCK G EA ++ D ME+ I + V+Y +I
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 275 GFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP 332
CKE + EA MF E+ + P+ +ID C+ +++D+A + M P
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 333 GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFK 392
A ++++ LC++GR+ +A KL +E EK +T NTLI + G+L A +
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 393 NKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK 451
+ M E KP+ FTY LI G K ++ +L ML+ G P+ ++ + +G K
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 183/376 (48%), Gaps = 4/376 (1%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQD- 190
L+ +Y + + ++++F ++ + +K + + LL+ L+++ ++V + K +
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA 250
G+ NI+ N L+ A K D+E A ++L+E+ G+VP++ TY T++ Y +G A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDG 308
+ ++M G D +Y L+ G+CK GR EA + +++ + PN VTY +I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQAD 368
CK + +A + + M + P + ++ LC+D ++ +A L +M + D
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 369 NITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLF 428
N +TLI+ K G + A K ++ E G P TY LI G C+ EL A L
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 429 GMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIE 488
M + P+ +Y+ +++G K NV + + +E L G + + + L L K+
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLG 484
Query: 489 QIECAEKLFYHMEGNG 504
+ E A K+ NG
Sbjct: 485 KEEDAMKIVSMAVMNG 500
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 153/357 (42%), Gaps = 39/357 (10%)
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLL-NEMEEKGVVPDIFTYNTLISL 240
+I R+ GV ++ N L++ +++ + + N E G+ P+IFT N L+
Sbjct: 141 RIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKA 200
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PN 298
CKK A + D++ G+ ++V+Y +++ G+ G M A R+ E+ D P+
Sbjct: 201 LCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPD 260
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
TYT L+DGYCK +A V + ME + P TY ++R LC++ + +A + +
Sbjct: 261 ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFD 320
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD 418
EM E+ D+ C +I+A + + A KML++ PD LIH CK
Sbjct: 321 EMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Query: 419 ELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
+ A++L F + G PS + Y
Sbjct: 381 RVTEARKL-FDEFEKGSIPSLLT-----------------------------------YN 404
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
LI +C+ ++ A +L+ M ++ Y L K+G VLEEM
Sbjct: 405 TLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 461
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 158/364 (43%), Gaps = 8/364 (2%)
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL---YCKKGMH 247
G N Y+ ++ S++R + + L+ ++ P N I L Y G +
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADLR-NSYPPIKCGENLFIDLLRNYGLAGRY 136
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA---TPNHVTYTT 304
++ I ++ G+ + S N+L+ + R MF K++ TPN T
Sbjct: 137 ESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNL 196
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
L+ CK N+++ A KV + + + GL P + TY +IL G + A ++L EM ++
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
D T L++ Y K+G A + M ++ ++P+ TY +I CK + A+
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316
Query: 425 ELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
+ ML+ F P ++D C+ VD L + L D ++ LI L
Sbjct: 317 NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWL 376
Query: 485 CKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITA 544
CK ++ A KLF E I + Y +L + G+ + A + ++M +R+ A
Sbjct: 377 CKEGRVTEARKLFDEFEKGSIPS-LLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNA 435
Query: 545 KIYS 548
Y+
Sbjct: 436 FTYN 439
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 15/296 (5%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
+ A +V E+M P TVL+ K G + + + ++ + N Y +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
I A K + A+ + +EM E+ +PD +I C+ EA + KM +
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEI-KDATPNHVTYTTLIDGYCKANELDQALKV 321
D ++LI+ CKEGR+ EA ++F E K + P+ +TY TLI G C+ EL +A ++
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRL 422
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+ M + P TYN ++ L ++G +++ ++L EM E + T L K
Sbjct: 423 WDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
+G + A+K + + +G K D +++ + F G LD G P
Sbjct: 483 LGKEEDAMKIVSMAVMNG-KVDKESWELFLKKFA-------------GELDKGVLP 524
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 55/245 (22%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
MI+ L K K A+ M D++ R F
Sbjct: 301 VMIRALCKEKKSGEARNMFDEMLERSFM-------------------------------- 328
Query: 139 SRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
P C ++ +L +D + + ++++++ + + +
Sbjct: 329 --------------------PDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNAL 368
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
+ LIH K V A++L +E EKG +P + TYNTLI+ C+KG EA + D M
Sbjct: 369 LSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMY 427
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELD 316
+ +YN LI G K G ++E R+ E+ + PN T+ L +G K + +
Sbjct: 428 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEE 487
Query: 317 QALKV 321
A+K+
Sbjct: 488 DAMKI 492
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 222/514 (43%), Gaps = 85/514 (16%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
++ +++ L+ + + + + VF Q+ +KP ++ +L+K + ++ +
Sbjct: 143 ISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLK 202
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
+++ DG + + YN LIH K V+ A +L+ +ME++G P++FTY LI +
Sbjct: 203 FQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLI 262
Query: 244 KGMHYEALSIQDKMER---------------EGI---------------------NLDIV 267
G EAL Q +M R GI NL V
Sbjct: 263 AGRVDEALK-QLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRV 321
Query: 268 SYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELM 325
Y++++Y +E + +I + P+ T+ + K ++L + ++ +
Sbjct: 322 GYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGF 381
Query: 326 EAKGLYPG-----------------------------------VATYNSILRKLCQDGRI 350
++G+ PG V +YN+++ LC+ RI
Sbjct: 382 VSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRI 441
Query: 351 RDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
+A L EM ++ + + +T NT ++ YS GD+K K+L G KPD T+ +
Sbjct: 442 ENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLI 501
Query: 411 IHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
I+ C+ E++ A + ML+ G P+ +Y+ ++ C + D + L + GL
Sbjct: 502 INCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGL 561
Query: 471 CLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASN 530
D Y A I+ CK+ +++ AE+L M G+ D+ Y++L A +SG+ S A
Sbjct: 562 SPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEA-- 619
Query: 531 VLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQM 564
R + + + + C VPD + + V ++
Sbjct: 620 -------REMFSSIERHGC--VPDSYTKRLVEEL 644
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 159/385 (41%), Gaps = 26/385 (6%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
+VL ++L + G + ++ K + G ++ + LI + + + + ++
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISF 173
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
G+ P YN +I K A +M +G D +YN LI+G CK+G + E
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 285 ATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A R+ +++ PN TYT LIDG+ A +D+ALK E+M + L P AT + +
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVH 293
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
+ + A ++L EK + + ++ S K +F K+ E G P
Sbjct: 294 GIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIP 353
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV------------DGYC 450
D T+ A + K +L + G + G P + Y +V D Y
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYL 413
Query: 451 KKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSV 510
K+ VD +L+ Y A+I LCK +IE A M+ GIS + V
Sbjct: 414 KQMGVDGLLS------------SVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLV 461
Query: 511 IYTSLAYAYWKSGKTSVASNVLEEM 535
+ + Y G VLE++
Sbjct: 462 TFNTFLSGYSVRGDVKKVHGVLEKL 486
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/522 (23%), Positives = 219/522 (41%), Gaps = 45/522 (8%)
Query: 23 WGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQ 82
W L ++ LS + I +LL+ N + FF W T + H ++ I
Sbjct: 63 WETLSTKFSSIDLSDSLIETILLRFK-NPETAKQALSFFHWSSHTRNLRHGIKSYALTIH 121
Query: 83 ILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQ---VLSWLVIHYAKS 139
IL K + A+ +++ + D E++S V LV YAK
Sbjct: 122 ILVKARLLIDARALIES----SLLNSPPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKI 177
Query: 140 RMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIY 199
R + VF KRL G L++
Sbjct: 178 RYLELGFDVF-----------------------------------KRLCDCGFTLSVITL 202
Query: 200 NCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER 259
N LIH SKS+ + ++ +K + P+ T +I + CK+G E + + D++
Sbjct: 203 NTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICG 262
Query: 260 EGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQ 317
+ ++ SL++ +E R+ E+ + + K+ + + Y+ ++ K +L
Sbjct: 263 KRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVS 322
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
A KV + M +G Y +R C+ G +++A +LL+EM E V + T N LI
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
+++ G + L++ M+ GL P + ++ K++ + A E+L +D GF P
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVP 442
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
+YS ++ G+ + +++D L L E + + V+R+LI LC ++E EK
Sbjct: 443 DEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYL 502
Query: 498 YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
M+ I ++ IY +L A+ K G + A V EM R
Sbjct: 503 KIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEMISVR 544
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 4/252 (1%)
Query: 291 EIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
EI +TP + + L+ Y K L+ V + + G V T N+++ +I
Sbjct: 158 EISSSTP--LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIH-YSSKSKI 214
Query: 351 RDANKLLNEMS-EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
D + E + +K++ + IT +I K G LK + +++ P +
Sbjct: 215 DDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTS 274
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKG 469
L+ + +E + LL +L YS +V K+ ++ + + DE L +G
Sbjct: 275 LVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRG 334
Query: 470 LCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVAS 529
++ VY +R C+ ++ AE+L ME +G+S + L + + G
Sbjct: 335 FSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGL 394
Query: 530 NVLEEMAKRRLI 541
E M R L+
Sbjct: 395 EYCEVMVTRGLM 406
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 152/295 (51%), Gaps = 6/295 (2%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
T ++ +L + + K+ +V+DG N YN LIH+ ++ + A + N+M+E
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
G PD TY TLI ++ K G A+ + +M+ G++ D +Y+ +I K G +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 285 ATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A ++F E+ D TPN VTY ++D + KA ALK+ M+ G P TY+ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
L G + +A + EM +K D L++ + K G+++ A ++ ML +GL+P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV----DGYCKKD 453
+ T +L+ F +++++ A ELL ML G PS +Y+ ++ DG K D
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 169/362 (46%), Gaps = 30/362 (8%)
Query: 6 NQRQFIDGVCAIIVKGHWGNLLK---VNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFK 62
N ++ V +++ + WG + N + + +QVL Q+ N YG ++ F F
Sbjct: 297 NSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQM--NDYGNALGF--FY 352
Query: 63 WVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDP 122
W++ P + H M+ L + K F ++LD++ + D
Sbjct: 353 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM-----------------VRDGC 395
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
+ N+ + L+ Y ++ +A+ VF QM+ KP L+ K G ++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+++R+ G+ + + Y+ +I+ K+ + A +L EM ++G P++ TYN ++ L+
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSL--IYGFCKEGRMREATRMFSEI--KDATPN 298
K + AL + M+ G D V+Y+ + + G C G + EA +F+E+ K+ P+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPD 573
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
Y L+D + KA +++A + + M GL P V T NS+L + +I +A +LL
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 359 EM 360
M
Sbjct: 634 NM 635
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 150/321 (46%), Gaps = 16/321 (4%)
Query: 211 DVERAKQLLNEMEEKGVVPDIF--------------TYNTLISLYCKKGMHYEALSIQDK 256
D +A Q+L +M + G F TY T++ + + D+
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDE 389
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANE 314
M R+G + V+YN LI+ + + + EA +F+++++A P+ VTY TLID + KA
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
LD A+ + + M+A GL P TY+ I+ L + G + A+KL EM ++ + +T N
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+++ ++K + ++ALK M +G +PD TY ++ LE A+ + M
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
+ P Y +VD + K NV+ L GL + +L+ ++ +I A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 495 KLFYHMEGNGISGDSVIYTSL 515
+L +M G+ YT L
Sbjct: 630 ELLQNMLALGLRPSLQTYTLL 650
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%)
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYTT++ +A + K+ + M G P TYN ++ + + +A + N+M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
E + D +T TLI+ ++K G L A+ +M GL PD FTY +I+ K L
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+A +L M+D G TP+ +Y+ ++D + K N L L + + G D Y +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
+ L +E AE +F M+ D +Y L + K+G A
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%)
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
TY +++ L + + NKLL+EM Q + +T N LI++Y + L A+ N+M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
E+G KPD TY LI K L+ A ++ M G +P +YS I++ K ++
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
A L E + +G + Y ++ K + A KL+ M+ G D V Y+ +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
G A V EM ++ I +Y
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 14/280 (5%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+AK+R Q+AL+++ M+ +P ++++ L G + + Q + +
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+Y L+ K+ +VE+A Q M G+ P++ T N+L+S + + EA +
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTL-IDGYCKA 312
M G+ + +Y +L+ C +GR + ++ +T P H+ + G
Sbjct: 634 NMLALGLRPSLQTY-TLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGE 692
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI-- 370
N + A +LM ++ ++++ L + G+ +A + ++K V D +
Sbjct: 693 NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALRE 752
Query: 371 -TCNT-LINAY-----SKIGDLKSALK-FKNKMLESGLKP 402
+C+ LIN + + + L L F+ +ML SG P
Sbjct: 753 KSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCP 792
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 152/295 (51%), Gaps = 6/295 (2%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
T ++ +L + + K+ +V+DG N YN LIH+ ++ + A + N+M+E
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
G PD TY TLI ++ K G A+ + +M+ G++ D +Y+ +I K G +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 285 ATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A ++F E+ D TPN VTY ++D + KA ALK+ M+ G P TY+ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
L G + +A + EM +K D L++ + K G+++ A ++ ML +GL+P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV----DGYCKKD 453
+ T +L+ F +++++ A ELL ML G PS +Y+ ++ DG K D
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 169/362 (46%), Gaps = 30/362 (8%)
Query: 6 NQRQFIDGVCAIIVKGHWGNLLK---VNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFK 62
N ++ V +++ + WG + N + + +QVL Q+ N YG ++ F F
Sbjct: 297 NSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQM--NDYGNALGF--FY 352
Query: 63 WVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDP 122
W++ P + H M+ L + K F ++LD++ + D
Sbjct: 353 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM-----------------VRDGC 395
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
+ N+ + L+ Y ++ +A+ VF QM+ KP L+ K G ++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+++R+ G+ + + Y+ +I+ K+ + A +L EM ++G P++ TYN ++ L+
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSL--IYGFCKEGRMREATRMFSEI--KDATPN 298
K + AL + M+ G D V+Y+ + + G C G + EA +F+E+ K+ P+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPD 573
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
Y L+D + KA +++A + + M GL P V T NS+L + +I +A +LL
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 359 EM 360
M
Sbjct: 634 NM 635
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 150/321 (46%), Gaps = 16/321 (4%)
Query: 211 DVERAKQLLNEMEEKGVVPDIF--------------TYNTLISLYCKKGMHYEALSIQDK 256
D +A Q+L +M + G F TY T++ + + D+
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDE 389
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANE 314
M R+G + V+YN LI+ + + + EA +F+++++A P+ VTY TLID + KA
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
LD A+ + + M+A GL P TY+ I+ L + G + A+KL EM ++ + +T N
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+++ ++K + ++ALK M +G +PD TY ++ LE A+ + M
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
+ P Y +VD + K NV+ L GL + +L+ ++ +I A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 495 KLFYHMEGNGISGDSVIYTSL 515
+L +M G+ YT L
Sbjct: 630 ELLQNMLALGLRPSLQTYTLL 650
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%)
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYTT++ +A + K+ + M G P TYN ++ + + +A + N+M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
E + D +T TLI+ ++K G L A+ +M GL PD FTY +I+ K L
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+A +L M+D G TP+ +Y+ ++D + K N L L + + G D Y +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
+ L +E AE +F M+ D +Y L + K+G A
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%)
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
TY +++ L + + NKLL+EM Q + +T N LI++Y + L A+ N+M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
E+G KPD TY LI K L+ A ++ M G +P +YS I++ K ++
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
A L E + +G + Y ++ K + A KL+ M+ G D V Y+ +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
G A V EM ++ I +Y
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 14/280 (5%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+AK+R Q+AL+++ M+ +P ++++ L G + + Q + +
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+Y L+ K+ +VE+A Q M G+ P++ T N+L+S + + EA +
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTL-IDGYCKA 312
M G+ + +Y +L+ C +GR + ++ +T P H+ + G
Sbjct: 634 NMLALGLRPSLQTY-TLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGE 692
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI-- 370
N + A +LM ++ ++++ L + G+ +A + ++K V D +
Sbjct: 693 NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALRE 752
Query: 371 -TCNT-LINAY-----SKIGDLKSALK-FKNKMLESGLKP 402
+C+ LIN + + + L L F+ +ML SG P
Sbjct: 753 KSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCP 792
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 152/295 (51%), Gaps = 6/295 (2%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
T ++ +L + + K+ +V+DG N YN LIH+ ++ + A + N+M+E
Sbjct: 368 TTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE 427
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
G PD TY TLI ++ K G A+ + +M+ G++ D +Y+ +I K G +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 285 ATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A ++F E+ D TPN VTY ++D + KA ALK+ M+ G P TY+ ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
L G + +A + EM +K D L++ + K G+++ A ++ ML +GL+P
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV----DGYCKKD 453
+ T +L+ F +++++ A ELL ML G PS +Y+ ++ DG K D
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 169/362 (46%), Gaps = 30/362 (8%)
Query: 6 NQRQFIDGVCAIIVKGHWGNLLK---VNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFK 62
N ++ V +++ + WG + N + + +QVL Q+ N YG ++ F F
Sbjct: 297 NSGHIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQM--NDYGNALGF--FY 352
Query: 63 WVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDP 122
W++ P + H M+ L + K F ++LD++ + D
Sbjct: 353 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM-----------------VRDGC 395
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
+ N+ + L+ Y ++ +A+ VF QM+ KP L+ K G ++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+++R+ G+ + + Y+ +I+ K+ + A +L EM ++G P++ TYN ++ L+
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSL--IYGFCKEGRMREATRMFSEI--KDATPN 298
K + AL + M+ G D V+Y+ + + G C G + EA +F+E+ K+ P+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPD 573
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
Y L+D + KA +++A + + M GL P V T NS+L + +I +A +LL
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 359 EM 360
M
Sbjct: 634 NM 635
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 150/321 (46%), Gaps = 16/321 (4%)
Query: 211 DVERAKQLLNEMEEKGVVPDIF--------------TYNTLISLYCKKGMHYEALSIQDK 256
D +A Q+L +M + G F TY T++ + + D+
Sbjct: 330 DAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDE 389
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANE 314
M R+G + V+YN LI+ + + + EA +F+++++A P+ VTY TLID + KA
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
LD A+ + + M+A GL P TY+ I+ L + G + A+KL EM ++ + +T N
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+++ ++K + ++ALK M +G +PD TY ++ LE A+ + M
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
+ P Y +VD + K NV+ L GL + +L+ ++ +I A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 495 KLFYHMEGNGISGDSVIYTSL 515
+L +M G+ YT L
Sbjct: 630 ELLQNMLALGLRPSLQTYTLL 650
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%)
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYTT++ +A + K+ + M G P TYN ++ + + +A + N+M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
E + D +T TLI+ ++K G L A+ +M GL PD FTY +I+ K L
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+A +L M+D G TP+ +Y+ ++D + K N L L + + G D Y +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
+ L +E AE +F M+ D +Y L + K+G A
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%)
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
TY +++ L + + NKLL+EM Q + +T N LI++Y + L A+ N+M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
E+G KPD TY LI K L+ A ++ M G +P +YS I++ K ++
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
A L E + +G + Y ++ K + A KL+ M+ G D V Y+ +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
G A V EM ++ I +Y
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 123/280 (43%), Gaps = 14/280 (5%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+AK+R Q+AL+++ M+ +P ++++ L G + + Q + +
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+Y L+ K+ +VE+A Q M G+ P++ T N+L+S + + EA +
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQ 633
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTL-IDGYCKA 312
M G+ + +Y +L+ C +GR + ++ +T P H+ + G
Sbjct: 634 NMLALGLRPSLQTY-TLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGE 692
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI-- 370
N + A +LM ++ ++++ L + G+ +A + ++K V D +
Sbjct: 693 NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALRE 752
Query: 371 -TCNT-LINAY-----SKIGDLKSALK-FKNKMLESGLKP 402
+C+ LIN + + + L L F+ +ML SG P
Sbjct: 753 KSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCP 792
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 180/387 (46%), Gaps = 30/387 (7%)
Query: 54 PSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXX 113
P + F W+ P++ H++ +++ +L +Q++ ++
Sbjct: 40 PQTALSFSDWISRIPNFKHNVTSYASLVTLLC-------SQEIPYEVPKITILMIK---- 88
Query: 114 XXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK 173
NS + V+ + ++ D+ ++ Y+L P LLSSL +
Sbjct: 89 ---------SCNSVRDALFVVDFCRTMRKGDSFEI-----KYKLTPK--CYNNLLSSLAR 132
Query: 174 DGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFT 233
G + +++ +++D V +IY +N L++ K V AKQ + + + G PD FT
Sbjct: 133 FGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFT 192
Query: 234 YNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK 293
Y + I+ +C++ A + +M + G + + VSY LIYG + ++ EA + ++K
Sbjct: 193 YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMK 252
Query: 294 D--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIR 351
D PN TYT LID C + + +A+ + + M G+ P Y +++ C +
Sbjct: 253 DDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLD 312
Query: 352 DANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI 411
+A+ LL M E + + IT N LI + K ++ A+ +KMLE L PD TY LI
Sbjct: 313 EASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLI 371
Query: 412 HGFCKMDELESAKELLFGMLDAGFTPS 438
G C L+SA LL M ++G P+
Sbjct: 372 AGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 140/274 (51%), Gaps = 3/274 (1%)
Query: 234 YNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK 293
YN L+S + G+ E + +M + ++ DI ++N+L+ G+CK G + EA + + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 294 DA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIR 351
A P++ TYT+ I G+C+ E+D A KV + M G + +Y ++ L + +I
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 352 DANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI 411
+A LL +M + + T LI+A G A+ +M ESG+KPD Y LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 412 HGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC 471
FC D L+ A LL ML+ G P+ +Y+ ++ G+CKK NV + L + L + L
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLV 361
Query: 472 LDASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
D Y LI C ++ A +L ME +G+
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 9/300 (3%)
Query: 250 ALSIQDKMER-EGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDG 308
ALS D + R ++ SY SL+ C + E ++ + + + N V +
Sbjct: 43 ALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKI-TILMIKSCNSVRDALFVVD 101
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQAD 368
+C+ + +++ + K YN++L L + G + + +L EM E V D
Sbjct: 102 FCRTMRKGDSFEIKYKLTPK-------CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPD 154
Query: 369 NITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLF 428
T NTL+N Y K+G + A ++ ++++G PD FTY + I G C+ E+++A ++
Sbjct: 155 IYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFK 214
Query: 429 GMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIE 488
M G + SY+ ++ G + +D L+L + C + Y LI LC
Sbjct: 215 EMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSG 274
Query: 489 QIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
Q A LF M +GI D +YT L ++ AS +LE M + L+ Y+
Sbjct: 275 QKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYN 334
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 3/207 (1%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
+ + + + A +VF++M + + T L+ L + + + ++ D
Sbjct: 196 FITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDN 255
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
N+ Y LI A S A L +M E G+ PD Y LI +C EA
Sbjct: 256 CCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEAS 315
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGY 309
+ + M G+ ++++YN+LI GFCK+ + +A + S++ ++ P+ +TY TLI G
Sbjct: 316 GLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQ 374
Query: 310 CKANELDQALKVRELMEAKGLYPGVAT 336
C + LD A ++ LME GL P T
Sbjct: 375 CSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 141/318 (44%), Gaps = 21/318 (6%)
Query: 230 DIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSL-----IYGFCKEGRMRE 284
++ +Y +L++L C + + YE I M I S NS+ + FC+ R +
Sbjct: 59 NVTSYASLVTLLCSQEIPYEVPKITILM--------IKSCNSVRDALFVVDFCRTMRKGD 110
Query: 285 ATRMFSEIK-DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRK 343
+ EIK TP Y L+ + +++ ++ M + P + T+N+++
Sbjct: 111 SF----EIKYKLTPK--CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNG 164
Query: 344 LCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD 403
C+ G + +A + + + + D T + I + + ++ +A K +M ++G +
Sbjct: 165 YCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRN 224
Query: 404 PFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPD 463
+Y LI+G + +++ A LL M D P+ +Y+ ++D C + L
Sbjct: 225 EVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFK 284
Query: 464 EFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
+ G+ D +Y LI+ C + ++ A L HM NG+ + + Y +L + K
Sbjct: 285 QMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN 344
Query: 524 KTSVASNVLEEMAKRRLI 541
A +L +M ++ L+
Sbjct: 345 -VHKAMGLLSKMLEQNLV 361
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 195/408 (47%), Gaps = 25/408 (6%)
Query: 43 VLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHF-----------K 91
++ LS G ++ + FF W P Y HS + +M+ IL+K + F K
Sbjct: 100 IIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRK 159
Query: 92 TAQQMLDK----IAHRDFXXXXXXXXXXXRIHDDP----EVNSQVLSWLVIHYAKSRMTQ 143
T ++++ + R F + + P E + V L+ K+ +
Sbjct: 160 TNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVK 219
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A +VFE MR + P+L T LL ++G ++ ++ + G+ +I ++ L+
Sbjct: 220 EASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLL 278
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY-EALSIQDKMEREGI 262
+ + + A L+N+M ++G P++ Y LI C+ EA+ + +MER G
Sbjct: 279 SGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGC 338
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALK 320
DIV+Y +LI GFCK G + + + ++ K P+ VTY ++ + K + ++ L+
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ E M+ +G +P + YN ++R C+ G +++A +L NEM + T +IN ++
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
Query: 381 KIGDLKSALKFKNKMLESGL--KPDPFTYKALIHGFCKMDELESAKEL 426
G L A +M+ G+ P T K+L++ + D+LE AK++
Sbjct: 459 SQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 174/356 (48%), Gaps = 9/356 (2%)
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKG---VVPDIFTYNTLISLYCKKG 245
Q G + + ++ SK R L+ EM + + P++F L+ +
Sbjct: 124 QPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRRFASAN 181
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTY-TT 304
M +A+ + D+M + G+ D + L+ CK G ++EA+++F ++++ P ++ Y T+
Sbjct: 182 MVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTS 241
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
L+ G+C+ +L +A +V M+ GL P + + ++L G++ DA L+N+M ++
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 365 VQADNITCNT-LINAYSKIGD-LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
+ N+ C T LI A + + A++ +M G + D TY ALI GFCK ++
Sbjct: 302 FEP-NVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
+L M G PS +Y I+ + KK+ + L L ++ +G D +Y +IR
Sbjct: 361 GYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIR 420
Query: 483 RLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
CK+ +++ A +L+ ME NG+S + + + G A N +EM R
Sbjct: 421 LACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSR 476
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 150/297 (50%), Gaps = 7/297 (2%)
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK-DGTTNVVWKIHKR 186
V + L+ YA + DA + MR +P++ TVL+ +L + + + ++
Sbjct: 273 VFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVE 332
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
+ + G +I Y LI K +++ +L++M +KGV+P TY ++ + KK
Sbjct: 333 MERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQ 392
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTT 304
E L + +KM+R G + D++ YN +I CK G ++EA R+++E++ +P T+
Sbjct: 393 FEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVI 452
Query: 305 LIDGYCKANELDQALKVRELMEAKGLY--PGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+I+G+ L +A + M ++G++ P T S+L L +D ++ A + + +S
Sbjct: 453 MINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISN 512
Query: 363 KKVQAD-NITCNTL-INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
K + N++ T+ I+A G +K A + M+E L P P TY L+ G K+
Sbjct: 513 KTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKL 569
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 189/418 (45%), Gaps = 3/418 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N + + ++ + + L+VF++M + + + T L+++ ++G ++
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSR-DVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
R+ + + +I YN +I+AC++ D E L EM +G+ PDI TYNTL+S
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVT 301
+G+ EA + M GI D+ +Y+ L+ F K R+ + + E+ P+ +
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
Y L++ Y K+ + +A+ V M+A G P TY+ +L Q GR D +L EM
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
D T N LI + + G K + + M+E ++PD TY+ +I K E
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
A+++L M PS +Y+ +++ + + + L + G + +L+
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 482 RRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
+ ++ +E + + +GI + + + AY + GK A +M K R
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 166/355 (46%), Gaps = 6/355 (1%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
N +IY +I + +++ ++ +EM +GV +F+Y LI+ Y + G + +L +
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREAT-RMFSEIK--DATPNHVTYTTLIDGYCK 311
D+M+ E I+ I++YN++I + G E +F+E++ P+ VTY TL+
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
D+A V M G+ P + TY+ ++ + R+ LL EM+ D +
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
N L+ AY+K G +K A+ ++M +G P+ TY L++ F + + ++L M
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
+ P +Y+ +++ + + ++ L + + + + D Y +I K E
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG---KTSVASNVLEEMAKRRLIIT 543
A K+ +M N I S YT + A+ ++ + VA N + E+ I T
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 211/477 (44%), Gaps = 44/477 (9%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAK 138
A+I + ++T+ ++LD++ + +++ +L++ + A
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNE-------------------KISPSILTYNTVINAC 221
Query: 139 SRMTQD---ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+R D L +F +MR ++P + LLS+ G + + + + G+V +
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ Y+ L+ K R +E+ LL EM G +PDI +YN L+ Y K G EA+ +
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKAN 313
+M+ G + +Y+ L+ F + GR + ++F E+K + P+ TY LI+ + +
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
+ + + M + + P + TY I+ + G DA K+L M+ + +
Sbjct: 402 YFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYT 461
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
+I A+ + + AL N M E G P T+ +L++ F + ++ ++ +L ++D+
Sbjct: 462 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDS 521
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILAL----------PDEFLSKGLCLDASVYRALIRR 483
G + +++ ++ Y + + + PDE + L SVY R
Sbjct: 522 GIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE---RTLEAVLSVYS--FAR 576
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
L EC E+ F M+ + I + Y + Y K+ + + +LEEM R+
Sbjct: 577 LVD----ECREQ-FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRV 628
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 177/386 (45%), Gaps = 11/386 (2%)
Query: 124 VNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
V+ V S+ L+ Y ++ + +L++ ++M+ ++ P + ++++ + G + W
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG---LDW 228
Query: 182 K----IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ + + +G+ +I YN L+ AC+ + A+ + M + G+VPD+ TY+ L
Sbjct: 229 EGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHL 288
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-- 295
+ + K + + +M G DI SYN L+ + K G ++EA +F +++ A
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC 348
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
TPN TY+ L++ + ++ D ++ M++ P ATYN ++ + G ++
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
L ++M E+ ++ D T +I A K G + A K M + + P Y +I F
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
+ E A M + G PS ++ ++ + + V A+ + G+ +
Sbjct: 469 QAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRD 528
Query: 476 VYRALIRRLCKIEQIECAEKLFYHME 501
+ A I + + E A K + ME
Sbjct: 529 TFNAQIEAYKQGGKFEEAVKTYVDME 554
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 109/255 (42%), Gaps = 3/255 (1%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
+S+ + ++ + ++ + ++AL F M P + LL S + G I
Sbjct: 456 SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL 515
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
RLV G+ N +N I A + E A + +ME+ PD T ++S+Y
Sbjct: 516 SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFA 575
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDATPN-HVTY 302
+ E ++M+ I I+ Y ++ + K R + + E + + N H
Sbjct: 576 RLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVI 635
Query: 303 TTLIDGYCKANELDQALK-VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
+I G + Q ++ V + + ++G G+ YN++L L G+ A ++LNE +
Sbjct: 636 GQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEAT 695
Query: 362 EKKVQADNITCNTLI 376
++ + + N L+
Sbjct: 696 KRGLFPELFRKNKLV 710
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 209/430 (48%), Gaps = 21/430 (4%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
++ ++LV K A+Q+ E+M + + L+ L G+ N +
Sbjct: 140 DASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFV 199
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+RL+Q G+ N + Y+ L+ A K R + A +LL+E+ KG P++ +YN L++ +CK+
Sbjct: 200 ERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKE 259
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTY 302
G +A+++ ++ +G ++VSYN L+ C +GR EA + +E+ D P+ VTY
Sbjct: 260 GRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTY 319
Query: 303 TTLIDGYCKANELDQALKV-RELMEAKGLYPGVAT-YNSILRKLCQDGRIRDANKLLNEM 360
LI+ +QAL+V +E+ + + AT YN ++ +LC++G++ K L+EM
Sbjct: 320 NILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 379
Query: 361 SEKKVQADNITCN---TLINAYSKIGD---LKSALKFKNKMLESGLKPDPFTYKALIHGF 414
++ + + T N +L SK+ + + +L K K YK++I
Sbjct: 380 IYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF------YKSVITSL 433
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDA---ILALPDEFLSKGLC 471
C+ +A +LL+ M GF P +YS ++ G C + +L++ +E S+
Sbjct: 434 CRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEE--SENCK 491
Query: 472 LDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNV 531
+ A+I LCKI + + A ++F M + Y L + +A V
Sbjct: 492 PTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEV 551
Query: 532 LEEMAKRRLI 541
L+E+ R++I
Sbjct: 552 LDELRLRKVI 561
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 186/421 (44%), Gaps = 19/421 (4%)
Query: 120 DDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
DDP + LS D+ E + KP++ T LL L K
Sbjct: 78 DDPRSDEPNLS-------------DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKK 124
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
++ + +V G++ + Y L++ K +V A QL+ +ME+ G + TYN L+
Sbjct: 125 AIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVR 184
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATP 297
C G ++L +++ ++G+ + +Y+ L+ KE EA ++ EI K P
Sbjct: 185 GLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEP 244
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
N V+Y L+ G+CK D A+ + + AKG V +YN +LR LC DGR +AN LL
Sbjct: 245 NLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Query: 358 NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG--LKPDPFTYKALIHGFC 415
EM +T N LIN+ + G + AL+ +M + + +Y +I C
Sbjct: 305 AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLC 364
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDN-VDAILALPDEFLSKGLCLDA 474
K +++ + L M+ P+ +Y+ I C+ ++ V + +K C
Sbjct: 365 KEGKVDLVVKCLDEMIYRRCKPNEGTYNAI-GSLCEHNSKVQEAFYIIQSLSNKQKCCTH 423
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
Y+++I LC+ A +L Y M G D+ Y++L G + A VL
Sbjct: 424 DFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSI 483
Query: 535 M 535
M
Sbjct: 484 M 484
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 210/461 (45%), Gaps = 8/461 (1%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
+ L+ K+ + A++V E M + P A T L++ L K G ++ +++
Sbjct: 110 TQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMED 169
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
G N YN L+ + ++ Q + + +KG+ P+ FTY+ L+ K+ E
Sbjct: 170 HGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDE 229
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLID 307
A+ + D++ +G ++VSYN L+ GFCKEGR +A +F E+ K N V+Y L+
Sbjct: 230 AVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLR 289
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ- 366
C ++A + M+ P V TYN ++ L GR A ++L EMS+ Q
Sbjct: 290 CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQF 349
Query: 367 -ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD-ELESAK 424
+ N +I K G + +K ++M+ KP+ TY A I C+ + +++ A
Sbjct: 350 RVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAF 408
Query: 425 ELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
++ + + ++ Y ++ C+K N A L E G DA Y ALIR L
Sbjct: 409 YIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGL 468
Query: 485 CKIEQIECAEKLFYHMEGNGISGDSVI-YTSLAYAYWKSGKTSVASNVLEEMAKRRLIIT 543
C A ++ ME + +V + ++ K +T +A V E M +++ +
Sbjct: 469 CLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPN 528
Query: 544 AKIYSCFSVPDGH-GENKVSQMFWDHVVERGLMSRNTMRKI 583
Y+ H E ++++ D + R ++ +N + +I
Sbjct: 529 ETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRI 569
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 131/254 (51%), Gaps = 2/254 (0%)
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
PN T L+ CKAN L +A++V ELM + G+ P + Y ++ +LC+ G + A +L
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
+ +M + ++ +T N L+ +G L +L+F ++++ GL P+ FTY L+ K
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
+ A +LL ++ G P+ SY+ ++ G+CK+ D +AL E +KG +
Sbjct: 224 ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVS 283
Query: 477 YRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
Y L+R LC + E A L M+G + V Y L + G+T A VL+EM+
Sbjct: 284 YNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMS 343
Query: 537 K--RRLIITAKIYS 548
K + +TA Y+
Sbjct: 344 KGNHQFRVTATSYN 357
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 199/439 (45%), Gaps = 59/439 (13%)
Query: 36 SSTTIHQVLLQLSLNGYGPS--ISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTA 93
S + Q +++ LN + + +++ FF+W E HY HS++ MI+ AK + +K
Sbjct: 94 SGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLM 153
Query: 94 QQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMR 153
+++ + + +N + ++ YA+++ +A+ F M
Sbjct: 154 WDLINAMRKKKM------------------LNVETFCIVMRKYARAQKVDEAIYAFNVME 195
Query: 154 LYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVE 213
Y L P+L A +N L+ A KS++V
Sbjct: 196 KYDLPPNLVA-----------------------------------FNGLLSALCKSKNVR 220
Query: 214 RAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLI 273
+A+++ M ++ PD TY+ L+ + K+ +A + +M G + DIV+Y+ ++
Sbjct: 221 KAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMV 279
Query: 274 YGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLY 331
CK GR+ EA + + + P Y+ L+ Y N L++A+ ME G+
Sbjct: 280 DILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMK 339
Query: 332 PGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
VA +NS++ C+ R+++ ++L EM K V ++ +CN ++ + G+ A
Sbjct: 340 ADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV 399
Query: 392 KNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK 451
KM++ +PD TY +I FC+ E+E+A ++ M G PS ++S +++G C+
Sbjct: 400 FRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCE 458
Query: 452 KDNVDAILALPDEFLSKGL 470
+ L +E + G+
Sbjct: 459 ERTTQKACVLLEEMIEMGI 477
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 176/344 (51%), Gaps = 7/344 (2%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
++ Y+ +I + +K R + L+N M +K ++ ++ T+ ++ Y + EA+
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAF 191
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-TPNHVTYTTLIDGYCKAN 313
+ ME+ + ++V++N L+ CK +R+A +F ++D TP+ TY+ L++G+ K
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEP 251
Query: 314 ELDQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
L +A +V RE+++A G +P + TY+ ++ LC+ GR+ +A ++ M +
Sbjct: 252 NLPKAREVFREMIDA-GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
+ L++ Y L+ A+ +M SG+K D + +LI FCK + +++ +L M
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC-LDASVYRALIRRLCKIEQIE 491
G TP+ S + I+ ++ D + + + +C DA Y +I+ C+ +++E
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK--VCEPDADTYTMVIKMFCEKKEME 428
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
A+K++ +M G+ ++ L + T A +LEEM
Sbjct: 429 TADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEM 472
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 157/345 (45%), Gaps = 4/345 (1%)
Query: 193 VLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
+LN+ + ++ ++++ V+ A N ME+ + P++ +N L+S CK +A
Sbjct: 165 MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQE 224
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYC 310
+ + M R+ D +Y+ L+ G+ KE + +A +F E+ DA P+ VTY+ ++D C
Sbjct: 225 VFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILC 283
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
KA +D+AL + M+ P Y+ ++ + R+ +A EM ++AD
Sbjct: 284 KAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVA 343
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
N+LI A+ K +K+ + +M G+ P+ + ++ + E + A ++ M
Sbjct: 344 VFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 403
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
+ P +Y+ ++ +C+K ++ + KG+ + LI LC+
Sbjct: 404 IKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTT 462
Query: 491 ECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ A L M GI V + L K + V + E+M
Sbjct: 463 QKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 114/240 (47%), Gaps = 1/240 (0%)
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
N T+ ++ Y +A ++D+A+ +ME L P + +N +L LC+ +R A ++
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 358 NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
M ++ D+ T + L+ + K +L A + +M+++G PD TY ++ CK
Sbjct: 227 ENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 418 DELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVY 477
++ A ++ M + P+ YS +V Y ++ ++ + E G+ D +V+
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 478 RALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
+LI CK +++ ++ M+ G++ +S + + G+ A +V +M K
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK 405
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 167/328 (50%), Gaps = 5/328 (1%)
Query: 208 KSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIV 267
K ++E+ K+ L+ ++E G PD TYN LI + G +AL + D+M ++ + V
Sbjct: 130 KCGELEKMKERLSSIDEFGK-PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 268 SYNSLIYGFCKEGRMREATRM---FSEIKDATPNHVTYTTLIDGYCKANELDQALKVREL 324
++ +LI+G CK+ R++EA +M ++ P Y +LI C+ EL A K+++
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE 248
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGD 384
+ A Y++++ L + GR + + +L EMSEK + D +T N LIN + D
Sbjct: 249 AYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEND 308
Query: 385 LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW 444
+SA + ++M+E GLKPD +Y ++ F ++ + E A L M G +P SY
Sbjct: 309 SESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRI 368
Query: 445 IVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNG 504
+ DG C+ + + DE L KG +++LC+ ++E K+ + G
Sbjct: 369 VFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RG 427
Query: 505 ISGDSVIYTSLAYAYWKSGKTSVASNVL 532
I+GD+ +++ + K S + ++L
Sbjct: 428 IAGDADVWSVMIPTMCKEPVISDSIDLL 455
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 180/369 (48%), Gaps = 10/369 (2%)
Query: 124 VNSQVLSWLVIHY-AKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
V ++++ VI++ + ++ AL +F++M Y+ + + + LLS+LLK G + K
Sbjct: 80 VPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGE---LEK 136
Query: 183 IHKRL--VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
+ +RL + + + YN LIH CS+S + A +L +EM +K V P T+ TLI
Sbjct: 137 MKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHG 196
Query: 241 YCKKGMHYEALSIQ-DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TP 297
CK EAL ++ D ++ G+ + Y SLI C+ G + A ++ E +
Sbjct: 197 LCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV 256
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
+ Y+TLI KA ++ + E M KG P TYN ++ C + AN++L
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 358 NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
+EM EK ++ D I+ N ++ + +I + A M G PD +Y+ + G C+
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 418 DELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVY 477
+ E A +L ML G+ P + C+ ++ IL+ L +G+ DA V+
Sbjct: 377 LQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLE-ILSKVISSLHRGIAGDADVW 435
Query: 478 RALIRRLCK 486
+I +CK
Sbjct: 436 SVMIPTMCK 444
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 168/381 (44%), Gaps = 38/381 (9%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEME-EKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
++ Y+ +I S+ + Q+L ++ + +VP + +I+ + + + AL +
Sbjct: 46 SLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHM 105
Query: 254 QDKMER----------------------------------EGINLDIVSYNSLIYGFCKE 279
D+M + E D +YN LI+G +
Sbjct: 106 FDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQS 165
Query: 280 GRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVR-ELMEAKGLYPGVAT 336
G +A ++F E+ K P VT+ TLI G CK + + +ALK++ ++++ G+ P V
Sbjct: 166 GCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHI 225
Query: 337 YNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML 396
Y S+++ LCQ G + A KL +E E K++ D +TLI++ K G +M
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMS 285
Query: 397 ESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
E G KPD TY LI+GFC ++ ESA +L M++ G P SY+ I+ + + +
Sbjct: 286 EKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWE 345
Query: 457 AILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLA 516
L ++ +G D YR + LC+ Q E A + M G
Sbjct: 346 EATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFL 405
Query: 517 YAYWKSGKTSVASNVLEEMAK 537
+SGK + S V+ + +
Sbjct: 406 QKLCESGKLEILSKVISSLHR 426
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ D T N LI+ S+ G ALK ++M++ +KP T+ LIHG CK ++ A +
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 426 LLFGMLDA-GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
+ ML G P+ Y+ ++ C+ + L DE + +DA++Y LI L
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 485 CKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
K + + M G D+V Y L + + A+ VL+EM ++ L
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 78/190 (41%), Gaps = 1/190 (0%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
+V++ + S L+ K+ + + + E+M KP VL++ + + +
Sbjct: 255 KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANR 314
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ +V+ G+ ++ YN ++ + + E A L +M +G PD +Y + C
Sbjct: 315 VLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 374
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHV-T 301
+ EA I D+M +G + C+ G++ +++ S +
Sbjct: 375 EGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADV 434
Query: 302 YTTLIDGYCK 311
++ +I CK
Sbjct: 435 WSVMIPTMCK 444
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
K ELE KE L + + G P C+Y+ ++ G + D L L DE + K +
Sbjct: 130 KCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 476 VYRALIRRLCKIEQIECAEKLFYHM-EGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
+ LI LCK +++ A K+ + M + G+ IY SL A + G+ S A + +E
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE 248
Query: 535 MAKRRLIITAKIYSCF--SVPDGHGENKVSQMFWDHVVERG 573
+ ++ + A IYS S+ N+VS M + + E+G
Sbjct: 249 AYEGKIKVDAAIYSTLISSLIKAGRSNEVS-MILEEMSEKG 288
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 166/346 (47%), Gaps = 19/346 (5%)
Query: 56 ISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXX 115
+++ FF W + H++ +++I A+ +K +++D++
Sbjct: 131 LAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEM--------------- 175
Query: 116 XRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
+ D ++ + L+ ++ + + A+ F + + + +P + +L+SLL
Sbjct: 176 --VQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVK 233
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
++ ++K++++DG ++ YN L+ + ++R +L +EM G PD +TYN
Sbjct: 234 QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYN 293
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA 295
L+ + K AL+ + M+ GI+ ++ Y +LI G + G + E+ A
Sbjct: 294 ILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKA 353
Query: 296 --TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
P+ V YT +I GY + ELD+A ++ M KG P V TYNS++R LC G R+A
Sbjct: 354 GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREA 413
Query: 354 NKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
LL EM + + + +TL++ K G L A K +M++ G
Sbjct: 414 CWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 2/308 (0%)
Query: 233 TYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF--S 290
+Y+ L+ ++ + G + + D+M ++G ++N LI + G ++A F S
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 291 EIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
+ + P +Y +++ + V + M G P V TYN +L + G++
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 351 RDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
++L +EM+ D+ T N L++ K +AL N M E G+ P Y L
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 411 IHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
I G + LE+ K L M+ AG P Y+ ++ GY +D + E KG
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 471 CLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASN 530
+ Y ++IR LC + A L ME G + + V+Y++L K+GK S A
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 531 VLEEMAKR 538
V+ EM K+
Sbjct: 451 VIREMVKK 458
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Query: 147 QVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHAC 206
++F++M P +LL L K + + G+ ++ Y LI
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 207 SKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDI 266
S++ ++E K L+EM + G PD+ Y +I+ Y G +A + +M +G ++
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 267 VSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVREL 324
+YNS+I G C G REA + E+ + PN V Y+TL+ KA +L +A KV
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Query: 325 MEAKGLY 331
M KG Y
Sbjct: 455 MVKKGHY 461
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 192/417 (46%), Gaps = 6/417 (1%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVL- 194
Y R AL FE M+ +++P +++ L K G ++ + + +
Sbjct: 258 YKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 317
Query: 195 -NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
++ + ++H S ++E + + M +G+ P+I +YN L+ Y GM ALS+
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 254 QDKMEREGINLDIVSYNSLI--YGFCKE-GRMREATRMFSEIKDATPNHVTYTTLIDGYC 310
+++ GI D+VSY L+ YG ++ G+ +E M + + PN VTY LID Y
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK-ERRKPNVVTYNALIDAYG 436
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
L +A+++ ME G+ P V + ++L + + + + +L+ + + +
Sbjct: 437 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 496
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
N+ I +Y +L+ A+ M + +K D T+ LI G C+M + A L M
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
D + YS ++ Y K+ V ++ ++ G D Y +++ E+
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 616
Query: 491 ECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
A +LF ME NGI DS+ ++L A+ K G+ S +++ M ++ + T ++
Sbjct: 617 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVF 673
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 195/421 (46%), Gaps = 12/421 (2%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+A+ A +F +M+ + KP L+++ + G + +++ + +
Sbjct: 153 HARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPS 212
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY-EALSIQ 254
YN LI+AC S + A ++ +M + GV PD+ T+N ++S Y K G Y +ALS
Sbjct: 213 RSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQYSKALSYF 271
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK----DATPNHVTYTTLIDGYC 310
+ M+ + D ++N +IY K G+ +A +F+ ++ + P+ VT+T+++ Y
Sbjct: 272 ELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYS 331
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
E++ V E M A+GL P + +YN+++ G A +L ++ + + D +
Sbjct: 332 VKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 391
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
+ L+N+Y + A + M + KP+ TY ALI + L A E+ M
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 431 LDAGFTP---SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
G P S C+ KK NVD +L+ S+G+ L+ + Y + I
Sbjct: 452 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ---SRGINLNTAAYNSAIGSYINA 508
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
++E A L+ M + DSV +T L + K A + L+EM + +T ++Y
Sbjct: 509 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 568
Query: 548 S 548
S
Sbjct: 569 S 569
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 175/390 (44%), Gaps = 10/390 (2%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y +SR A +VF MR + KP++ L+ + +G +I +++ QDG
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ N+ L+ ACS+S+ +L+ + +G+ + YN+ I Y +A+
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD-ATP-NHVTYTTLIDGY 309
++ M ++ + D V++ LI G C+ + EA E++D + P Y++++ Y
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
K ++ +A + M+ G P V Y S+L + A +L EM ++ D+
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 635
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL--L 427
I C+ L+ A++K G + + M E K PFT F + L+ K L
Sbjct: 636 IACSALMRAFNKGGQPSNVFVLMDLMRE---KEIPFTGAVFFEIFSACNTLQEWKRAIDL 692
Query: 428 FGMLDAGFTPSYCS--YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
M+D + PS + ++ + K V+A++ L + ++ G+ ++ Y L+ L
Sbjct: 693 IQMMDP-YLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 751
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+ ++ M G GI + +Y +
Sbjct: 752 AVGNWRKYIEVLEWMSGAGIQPSNQMYRDI 781
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 157/352 (44%), Gaps = 37/352 (10%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y + +A+++F QM +KP++ + LL++ + V + G
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 490
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ LN YN I + + ++E+A L M +K V D T+ LIS C+ + EA+
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 550
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGY 309
S +ME I L Y+S++ + K+G++ EA +F+++K A P+ + YT+++ Y
Sbjct: 551 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
+ + +A ++ MEA G+ P ++++R + G+ + L++ M EK++
Sbjct: 611 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTG 670
Query: 370 I-------TCNTL----------------------------INAYSKIGDLKSALKFKNK 394
CNTL ++ + K G +++ +K K
Sbjct: 671 AVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYK 730
Query: 395 MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
++ SG+ + TY L+ + E+L M AG PS Y I+
Sbjct: 731 IIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 782
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 192/417 (46%), Gaps = 6/417 (1%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVL- 194
Y R AL FE M+ +++P +++ L K G ++ + + +
Sbjct: 126 YKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 185
Query: 195 -NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
++ + ++H S ++E + + M +G+ P+I +YN L+ Y GM ALS+
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 254 QDKMEREGINLDIVSYNSLI--YGFCKE-GRMREATRMFSEIKDATPNHVTYTTLIDGYC 310
+++ GI D+VSY L+ YG ++ G+ +E M + + PN VTY LID Y
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK-ERRKPNVVTYNALIDAYG 304
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
L +A+++ ME G+ P V + ++L + + + + +L+ + + +
Sbjct: 305 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 364
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
N+ I +Y +L+ A+ M + +K D T+ LI G C+M + A L M
Sbjct: 365 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
D + YS ++ Y K+ V ++ ++ G D Y +++ E+
Sbjct: 425 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 484
Query: 491 ECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
A +LF ME NGI DS+ ++L A+ K G+ S +++ M ++ + T ++
Sbjct: 485 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVF 541
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 195/421 (46%), Gaps = 12/421 (2%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+A+ A +F +M+ + KP L+++ + G + +++ + +
Sbjct: 21 HARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPS 80
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY-EALSIQ 254
YN LI+AC S + A ++ +M + GV PD+ T+N ++S Y K G Y +ALS
Sbjct: 81 RSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQYSKALSYF 139
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK----DATPNHVTYTTLIDGYC 310
+ M+ + D ++N +IY K G+ +A +F+ ++ + P+ VT+T+++ Y
Sbjct: 140 ELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYS 199
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
E++ V E M A+GL P + +YN+++ G A +L ++ + + D +
Sbjct: 200 VKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVV 259
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
+ L+N+Y + A + M + KP+ TY ALI + L A E+ M
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 431 LDAGFTP---SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
G P S C+ KK NVD +L+ S+G+ L+ + Y + I
Sbjct: 320 EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ---SRGINLNTAAYNSAIGSYINA 376
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
++E A L+ M + DSV +T L + K A + L+EM + +T ++Y
Sbjct: 377 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 436
Query: 548 S 548
S
Sbjct: 437 S 437
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 175/390 (44%), Gaps = 10/390 (2%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y +SR A +VF MR + KP++ L+ + +G +I +++ QDG
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ N+ L+ ACS+S+ +L+ + +G+ + YN+ I Y +A+
Sbjct: 324 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 383
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD-ATP-NHVTYTTLIDGY 309
++ M ++ + D V++ LI G C+ + EA E++D + P Y++++ Y
Sbjct: 384 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 443
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
K ++ +A + M+ G P V Y S+L + A +L EM ++ D+
Sbjct: 444 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 503
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL--L 427
I C+ L+ A++K G + + M E K PFT F + L+ K L
Sbjct: 504 IACSALMRAFNKGGQPSNVFVLMDLMRE---KEIPFTGAVFFEIFSACNTLQEWKRAIDL 560
Query: 428 FGMLDAGFTPSYCS--YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
M+D + PS + ++ + K V+A++ L + ++ G+ ++ Y L+ L
Sbjct: 561 IQMMDP-YLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 619
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+ ++ M G GI + +Y +
Sbjct: 620 AVGNWRKYIEVLEWMSGAGIQPSNQMYRDI 649
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 157/352 (44%), Gaps = 37/352 (10%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y + +A+++F QM +KP++ + LL++ + V + G
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 358
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ LN YN I + + ++E+A L M +K V D T+ LIS C+ + EA+
Sbjct: 359 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 418
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGY 309
S +ME I L Y+S++ + K+G++ EA +F+++K A P+ + YT+++ Y
Sbjct: 419 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 478
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
+ + +A ++ MEA G+ P ++++R + G+ + L++ M EK++
Sbjct: 479 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTG 538
Query: 370 I-------TCNTL----------------------------INAYSKIGDLKSALKFKNK 394
CNTL ++ + K G +++ +K K
Sbjct: 539 AVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYK 598
Query: 395 MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
++ SG+ + TY L+ + E+L M AG PS Y I+
Sbjct: 599 IIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII 650
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 171/347 (49%), Gaps = 21/347 (6%)
Query: 56 ISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXX 115
+++ FF W ++ H+ C +++I A+ +K +++D++
Sbjct: 134 LAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEM--------------- 178
Query: 116 XRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
I D + + L+ ++ + +D ++ F + + + +P+ + +L SLL
Sbjct: 179 --IKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVK 236
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
++ +++++++DG ++ YN ++ A + +R +LL+EM + G PD++TYN
Sbjct: 237 QYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYN 296
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IK 293
L+ AL++ + M G+ ++ + +LI G + G++ EA + F + +K
Sbjct: 297 ILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYFMDETVK 355
Query: 294 -DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
TP+ V YT +I GY EL++A ++ + M KG P V TYNS++R C G+ ++
Sbjct: 356 VGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKE 415
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
A LL EM + + + +TL+N G + A + M+E G
Sbjct: 416 ACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 133/307 (43%), Gaps = 2/307 (0%)
Query: 234 YNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF--SE 291
Y+ L+ ++ + G + + D+M ++G ++N LI + G R+ F S+
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 292 IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIR 351
+ P +Y ++ + V E M G P V TYN ++ + G+
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 352 DANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI 411
+LL+EM + D T N L++ + +AL N M E G++P + LI
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 412 HGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC 471
G + +LE+ K + + G TP Y+ ++ GY ++ + E KG
Sbjct: 335 DGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
Query: 472 LDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNV 531
+ Y ++IR C + + A L ME G + + V+Y++L +GK A V
Sbjct: 395 PNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEV 454
Query: 532 LEEMAKR 538
+++M ++
Sbjct: 455 VKDMVEK 461
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 217 QLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGF 276
+L++EM + G T+N LI + G+ + + K + SYN++++
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSL 232
Query: 277 CKEGRMREATRMFSE-IKDA-TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGV 334
+ + ++ + ++D TP+ +TY ++ + + D+ ++ + M G P +
Sbjct: 233 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 335 ATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNK 394
TYN +L L + A LLN M E V+ I TLI+ S+ G L++ F ++
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDE 352
Query: 395 MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDN 454
++ G PD Y +I G+ ELE A+E+ M + G P+ +Y+ ++ G+C
Sbjct: 353 TVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGK 412
Query: 455 VDAILALPDEFLSKGLCLDASVYRALIRRL 484
AL E S+G + VY L+ L
Sbjct: 413 FKEACALLKEMESRGCNPNFVVYSTLVNNL 442
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 8/285 (2%)
Query: 269 YNSLIYGFCKEGRMREATRMFSE-IKDATPNHV-TYTTLIDGYCKANELDQALKVRE-LM 325
Y+ L+ F + G + R+ E IKD P T+ LI C E A V E +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFI 211
Query: 326 EAKGL--YPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
++K P +YN+IL L + + + + +M E D +T N ++ A ++G
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 384 DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYS 443
+ ++M++ G PD +TY L+H ++ +A LL M + G P ++
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 444 WIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGN 503
++DG + ++A DE + G D Y +I ++E AE++F M
Sbjct: 332 TLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEK 391
Query: 504 GISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
G + Y S+ + +GK A +L+EM R +YS
Sbjct: 392 GQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYS 436
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 200/422 (47%), Gaps = 58/422 (13%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVF-EQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
P +++++L+ V K R + A + + +RL L P + L+ + +
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVL-PDVITYNTLIKGYTRFIGIDEA 67
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
+ + +R+ + G+ ++ YN LI +K+ + R QL +EM G+ PD+++YNTL+S
Sbjct: 68 YAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127
Query: 241 YCKKGMHYEALSIQ--------------------DKMEREG---------------INLD 265
Y K G H EA I D + + G + +
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPE 187
Query: 266 IVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRE 323
+++YN LI G CK R+ M E+K + TPN VTYTT++ Y K +++ L++
Sbjct: 188 LMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFL 247
Query: 324 LMEAKG-LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC-NTLINAYSK 381
M+ +G + G A +++ L + GR +A + ++E+ ++ +I NTL+N Y K
Sbjct: 248 KMKKEGYTFDGFANC-AVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFK 306
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
G+L + ++ GLKPD +T+ +++G + A++ L + + G PS +
Sbjct: 307 DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVT 366
Query: 442 YSWIVDGYCKKDNVD------AILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEK 495
+ ++DG CK +VD A + + DEF Y +++ LCK ++ CA K
Sbjct: 367 CNCLIDGLCKAGHVDRAMRLFASMEVRDEF----------TYTSVVHNLCKDGRLVCASK 416
Query: 496 LF 497
L
Sbjct: 417 LL 418
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 168/355 (47%), Gaps = 5/355 (1%)
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
++ GV+ ++ YN LI ++ ++ A + M E G+ PD+ TYN+LIS K M
Sbjct: 40 IRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLML 99
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE---IKDATPNHVTYTT 304
L + D+M G++ D+ SYN+L+ + K GR EA ++ E + P TY
Sbjct: 100 NRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNI 159
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
L+D CK+ D A+++ + ++++ + P + TYN ++ LC+ R+ + ++ E+ +
Sbjct: 160 LLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG 218
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
+ +T T++ Y K ++ L+ KM + G D F A++ K E A
Sbjct: 219 YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAY 278
Query: 425 ELLFGMLDAGF-TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
E + ++ +G + SY+ +++ Y K N+DA+ L +E KGL D + ++
Sbjct: 279 ECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNG 338
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
L I AEK + G+ V L K+G A + M R
Sbjct: 339 LLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR 393
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 159/347 (45%), Gaps = 40/347 (11%)
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
+ N +++ K R++ERA+ LL + GV+PD+ TYNTLI Y + EA ++ +M
Sbjct: 15 LLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 74
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANEL 315
GI D+ +YNSLI G K + ++F E+ +P+ +Y TL+ Y K
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 316 DQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+A K+ E + GL PG+ TYN +L LC+ G +A +L + +
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR----------- 183
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+KP+ TY LI+G CK + S ++ + +G
Sbjct: 184 -------------------------VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG 218
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
+TP+ +Y+ ++ Y K ++ L L + +G D A++ L K + E A
Sbjct: 219 YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAY 278
Query: 495 KLFYHMEGNGI-SGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
+ + + +G S D V Y +L Y+K G ++LEE+ + L
Sbjct: 279 ECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGL 325
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 140/302 (46%), Gaps = 8/302 (2%)
Query: 150 EQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKS 209
E + L L P + +LL +L K G T+ ++ K L + V + YN LI+ KS
Sbjct: 143 EDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKS 201
Query: 210 RDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSY 269
R V ++ E+++ G P+ TY T++ +Y K + L + KM++EG D +
Sbjct: 202 RRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFAN 261
Query: 270 NSLIYGFCKEGRMREATRMFSE-IKDATPNH--VTYTTLIDGYCKANELDQALKVRELME 326
+++ K GR EA E ++ T + V+Y TL++ Y K LD + E +E
Sbjct: 262 CAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIE 321
Query: 327 AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLK 386
KGL P T+ I+ L G A K L + E +Q +TCN LI+ K G +
Sbjct: 322 MKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVD 381
Query: 387 SALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
A++ + S D FTY +++H CK L A +LL + G + ++
Sbjct: 382 RAMR----LFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVL 437
Query: 447 DG 448
G
Sbjct: 438 SG 439
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 8/231 (3%)
Query: 321 VRELMEAKGLYPGVAT--YNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
VR LM+ +PG++T N + LC+ + A LL + V D IT NTLI
Sbjct: 2 VRGLMK----FPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKG 57
Query: 379 YSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPS 438
Y++ + A +M E+G++PD TY +LI G K L +L ML +G +P
Sbjct: 58 YTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPD 117
Query: 439 YCSYSWIVDGYCK-KDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
SY+ ++ Y K + +A L ++ GL Y L+ LCK + A +LF
Sbjct: 118 MWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF 177
Query: 498 YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
H++ + + + Y L KS + ++ E+ K A Y+
Sbjct: 178 KHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYT 227
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 202/432 (46%), Gaps = 14/432 (3%)
Query: 137 AKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW--KIHKRLVQDGVVL 194
A++ + AL + +MR + ++++ SL + + V +++K + +D + L
Sbjct: 208 ARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLEL 267
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
++ + N +I +KS D +A QLL + G+ T ++IS G EA ++
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKA 312
+++ + GI +YN+L+ G+ K G +++A M SE+ + +P+ TY+ LID Y A
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
+ A V + MEA + P ++ +L G + ++L EM V+ D
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
N +I+ + K L A+ ++ML G++PD T+ LI CK A+E+ M
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI----E 488
G P +Y+ +++ Y ++ D + L + S+G+ + + L+ K +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 489 QIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
IEC E+ M+ G+ S +Y +L AY + G + A N M L + +
Sbjct: 568 AIECLEE----MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL--KPSLLA 621
Query: 549 CFSVPDGHGENK 560
S+ + GE++
Sbjct: 622 LNSLINAFGEDR 633
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 185/419 (44%), Gaps = 2/419 (0%)
Query: 119 HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
D E++ Q+++ +++ +AKS ALQ+ + L ++S+L G T
Sbjct: 262 RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTL 321
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
+ + L Q G+ YN L+ K+ ++ A+ +++EME++GV PD TY+ LI
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--AT 296
Y G A + +ME + + ++ L+ GF G ++ ++ E+K
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P+ Y +ID + K N LD A+ + M ++G+ P T+N+++ C+ GR A ++
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
M + T N +IN+Y + KM G+ P+ T+ L+ + K
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
A E L M G PS Y+ +++ Y ++ + + S GL
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 477 YRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+LI + + A + +M+ NG+ D V YT+L A + K V EEM
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 175/389 (44%), Gaps = 10/389 (2%)
Query: 137 AKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNI 196
A S T +A +FE++R +KP A LL +K G + + + GV +
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
+ Y+ LI A + E A+ +L EME V P+ F ++ L++ + +G + + +
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 257 MEREGINLDIVSYNSLIYGF----CKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKA 312
M+ G+ D YN +I F C + M RM SE P+ VT+ TLID +CK
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE--GIEPDRVTWNTLIDCHCKH 492
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
A ++ E ME +G P TYN ++ R D +LL +M + + + +T
Sbjct: 493 GRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH 552
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
TL++ Y K G A++ +M GLKP Y ALI+ + + E A M
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS 612
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
G PS + + +++ + + A+ G+ D Y L++ L ++++ +
Sbjct: 613 DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Query: 493 AEKLFYHMEGNGISGD----SVIYTSLAY 517
++ M +G D S++ ++L Y
Sbjct: 673 VPVVYEEMIMSGCKPDRKARSMLRSALRY 701
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 175/403 (43%), Gaps = 39/403 (9%)
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
L+ L YN LI AC+++ D+E+A L+ +M + G D Y+ +I +
Sbjct: 188 LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK 247
Query: 247 --HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF--SEIKDATPNHVTY 302
L + ++ER+ + LD+ N +I GF K G +A ++ ++ + T
Sbjct: 248 IDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATL 307
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
++I + +A + E + G+ P YN++L+ + G ++DA +++EM +
Sbjct: 308 VSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 367
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
+ V D T + LI+AY G +SA +M ++P+ F + L+ GF E +
Sbjct: 368 RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQK 427
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
++L M G P Y+ ++D + K + +D + D LS+G+ D + LI
Sbjct: 428 TFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Query: 483 RLCKIEQIECAEKLFYHME-----------------------------------GNGISG 507
CK + AE++F ME GI
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 547
Query: 508 DSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
+ V +T+L Y KSG+ + A LEEM L ++ +Y+
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 590
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 9/355 (2%)
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
+Y+ LIHA +S + A L +++ + P TYN LI + +AL++ KM
Sbjct: 169 LYSILIHALGRSEKLYEAFLL---SQKQTLTP--LTYNALIGACARNNDIEKALNLIAKM 223
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREAT--RMFSEI-KDATPNHVTYTT-LIDGYCKAN 313
++G D V+Y+ +I + ++ R++ EI +D V +I G+ K+
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
+ +AL++ + +A GL AT SI+ L GR +A L E+ + ++ N
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
L+ Y K G LK A ++M + G+ PD TY LI + ESA+ +L M
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
P+ +S ++ G+ + + E S G+ D Y +I K ++ A
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
F M GI D V + +L + K G+ VA + E M +R + A Y+
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYN 518
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
LV Y KS DA++ E+M+ LKP L+++ + G + + + DG
Sbjct: 555 LVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG 614
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ ++ N LI+A + R A +L M+E GV PD+ TY TL+ +AL
Sbjct: 615 LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM----------KAL 664
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGR 281
DK ++ V Y +I CK R
Sbjct: 665 IRVDKFQKVP-----VVYEEMIMSGCKPDR 689
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 145/284 (51%), Gaps = 2/284 (0%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
T ++ +L + + K+ +V+DG N YN LIH+ ++ ++ A + N+M+E
Sbjct: 363 TTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQE 422
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
G PD TY TLI ++ K G A+ + +M+ G++ D +Y+ +I K G +
Sbjct: 423 AGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPA 482
Query: 285 ATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A R+F E+ + TPN VT+ +I + KA + ALK+ M+ G P TY+ ++
Sbjct: 483 AHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVME 542
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
L G + +A + EM K D L++ + K G++ A ++ ML++GL+P
Sbjct: 543 VLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRP 602
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
+ T +L+ F ++ + A LL ML G PS +Y+ ++
Sbjct: 603 NVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 148/321 (46%), Gaps = 16/321 (4%)
Query: 211 DVERAKQLLNEME--------------EKGVVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
D +A Q+L +M+ + G D TY T++ + E + D+
Sbjct: 325 DAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDE 384
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANE 314
M R+G + V+YN LI+ + + ++EA +F+++++A P+ VTY TLID + KA
Sbjct: 385 MVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGF 444
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
LD A+ + + M+ GL P TY+ I+ L + G + A++L EM + + +T N
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+I ++K + ++ALK M +G +PD TY ++ LE A+ + M
Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN 564
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
+ P Y +VD + K NVD L GL + +L+ ++ ++ A
Sbjct: 565 WVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAY 624
Query: 495 KLFYHMEGNGISGDSVIYTSL 515
L M G+ YT L
Sbjct: 625 NLLQSMLALGLHPSLQTYTLL 645
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 170/362 (46%), Gaps = 30/362 (8%)
Query: 6 NQRQFIDGVCAIIVKGHWGNLLKV---NNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFK 62
N ++ V +I+ + WG+ + N + + +QVL Q+ + Y ++ F F
Sbjct: 292 NPGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQM--DNYANALGF--FY 347
Query: 63 WVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDP 122
W++ P + H M+ L + K F ++LD++ + D
Sbjct: 348 WLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEM-----------------VRDGC 390
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
+ N+ + L+ Y ++ ++A+ VF QM+ +P L+ K G ++
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMD 450
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+++R+ + G+ + + Y+ +I+ K+ + A +L EM +G P++ T+N +I+L+
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSL--IYGFCKEGRMREATRMFSEI--KDATPN 298
K + AL + M+ G D V+Y+ + + G C G + EA +F+E+ K+ P+
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPD 568
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
Y L+D + KA +D+A + + M GL P V T NS+L + R+ +A LL
Sbjct: 569 EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
Query: 359 EM 360
M
Sbjct: 629 SM 630
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%)
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
TYTT++ +A + + K+ + M G P TYN ++ + +++A + N+M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
E + D +T TLI+ ++K G L A+ +M E+GL PD FTY +I+ K L
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+A L M+ G TP+ +++ ++ + K N + L L + + G D Y +
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
+ L +E AE +F M+ D +Y L + K+G A
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%)
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
TY +++ L + + + NKLL+EM + + +T N LI++Y + LK A+ N+M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
E+G +PD TY LI K L+ A ++ M +AG +P +YS I++ K ++
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
A L E + +G + + +I K E A KL+ M+ G D V Y+ +
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
G A V EM ++ + +Y
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYG 573
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%)
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
D T T++ + K ++M+ G KP+ TY LIH + + + L+ A +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M +AG P +Y ++D + K +D + + GL D Y +I L K
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ A +LF M G G + + V + + + K+ A + +M
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM 525
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 172/369 (46%), Gaps = 7/369 (1%)
Query: 119 HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
HD P +S L+ AKSR Q+ +R ++ L+ K G+ +
Sbjct: 79 HDYPSYSS-----LIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVD 133
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
+ ++ V I N LI+ + ++E+AK + ++ + P+ ++N LI
Sbjct: 134 KAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILI 193
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDAT 296
+ K A + D+M + +V+YNSLI C+ M +A + ++ K
Sbjct: 194 KGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIR 253
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
PN VT+ L+ G C E ++A K+ ME +G PG+ Y ++ L + GRI +A L
Sbjct: 254 PNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLL 313
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
L EM +++++ D + N L+N + A + +M G KP+ TY+ +I GFC+
Sbjct: 314 LGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCR 373
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
+++ +S +L ML + P+ ++ +V G K N+D + + K L +
Sbjct: 374 IEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGA 433
Query: 477 YRALIRRLC 485
++ L+ LC
Sbjct: 434 WQNLLSDLC 442
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 146/344 (42%), Gaps = 2/344 (0%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y+ LI+ +KSR+ + Q+L + + V + LI Y K G +A+ + K+
Sbjct: 84 YSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKIT 143
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELD 316
I S N+LI G + +A F KD PN V++ LI G+ + +
Sbjct: 144 SFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWE 203
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
A KV + M + P V TYNS++ LC++ + A LL +M +K+++ + +T L+
Sbjct: 204 AACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLM 263
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
G+ A K M G KP Y L+ K ++ AK LL M
Sbjct: 264 KGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIK 323
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
P Y+ +V+ C + V + E KG +A+ YR +I C+IE + +
Sbjct: 324 PDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNV 383
Query: 497 FYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
M + + + K G A VLE M K+ L
Sbjct: 384 LNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 159/404 (39%), Gaps = 55/404 (13%)
Query: 70 YTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRD-------FXXXXXXXXXXXRIHDDP 122
+ H ++I LAK ++F Q+L + +R+ F +
Sbjct: 77 FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAI 136
Query: 123 EVNSQVLSWLVIHYAKSRMT-----------QDALQVFEQMRLYQLKPHLPACTVLLSSL 171
+V ++ S+ + +S T + A F+ + +L+P+ + +L+
Sbjct: 137 DVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGF 196
Query: 172 LKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDI 231
L K+ +++ V ++ YN LI ++ D+ +AK LL +M +K + P+
Sbjct: 197 LDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNA 256
Query: 232 FTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE 291
T+ L+ C KG + EA + ME G +V+Y L+ K GR+ EA + E
Sbjct: 257 VTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGE 316
Query: 292 IKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGR 349
+K P+ V Y L++ C + +A +V M+ KG P ATY
Sbjct: 317 MKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATY------------ 364
Query: 350 IRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
+I+ + +I D S L N ML S P P T+
Sbjct: 365 -----------------------RMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVC 401
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
++ G K L+ A +L M + ++ ++ C KD
Sbjct: 402 MVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKD 445
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 187/388 (48%), Gaps = 11/388 (2%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
T L+ KD + +++ R+V+ L+ I+N LIH K +++ + + ++M +
Sbjct: 276 TCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIK 335
Query: 225 KGVVPDIFTYNTLISLYCKKG-MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMR 283
KGV ++FTY+ +I YCK+G + Y + E I+ ++ Y +LI+GF K+G M
Sbjct: 336 KGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMD 395
Query: 284 EATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSIL 341
+A + + D P+H+TY L+ K +EL A+ + + + L G ++
Sbjct: 396 KAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSI----LDNGCGINPPVI 451
Query: 342 RKLCQDGRIR-DANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGL 400
L G I LL E++ K + + A + +AL KM+ G
Sbjct: 452 DDL---GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGC 508
Query: 401 KPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILA 460
P PF+Y ++I + + +E L+ + + F P +Y +V+ CKK++ DA A
Sbjct: 509 TPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFA 568
Query: 461 LPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYW 520
+ D GL ++Y ++I L K ++ AE+ F M +GI D + Y + Y
Sbjct: 569 IIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYA 628
Query: 521 KSGKTSVASNVLEEMAKRRLIITAKIYS 548
++G+ A+ ++EE+ K L ++ Y+
Sbjct: 629 RNGRIDEANELVEEVVKHFLRPSSFTYT 656
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 143/330 (43%), Gaps = 37/330 (11%)
Query: 214 RAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLI 273
+ + LL E+ K + + C + + ALS +KM G SYNS+I
Sbjct: 460 KVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVI 519
Query: 274 YGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLY 331
+E + + + + I+ D P+ TY +++ CK N+ D A + + ME GL
Sbjct: 520 KCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLR 579
Query: 332 PGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
P VA Y+SI+ L + GR+ +A + +M E +Q D I +IN Y++ G + A +
Sbjct: 580 PTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANEL 639
Query: 392 KNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK 451
++++ L+P FTY LI GF KM +E + L ML+ G +P+ Y+
Sbjct: 640 VEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYT-------- 691
Query: 452 KDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVI 511
AL FL KG + + LF M N I D +
Sbjct: 692 --------ALIGHFLKKG-------------------DFKFSFTLFGLMGENDIKHDHIA 724
Query: 512 YTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
Y +L W++ V+ E K +L+
Sbjct: 725 YITLLSGLWRAMARKKKRQVIVEPGKEKLL 754
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 165/384 (42%), Gaps = 44/384 (11%)
Query: 193 VLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
V ++ Y +++ K D + A +++ MEE G+ P + Y+++I K+G EA
Sbjct: 544 VPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEE 603
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYC 310
KM GI D ++Y +I + + GR+ EA + E+ P+ TYT LI G+
Sbjct: 604 TFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV 663
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
K +++ + + M GL P V Y +++ + G + + L M E ++ D+I
Sbjct: 664 KMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHI 723
Query: 371 TCNTLINAY-----------------------------------SKIGDLKS---ALKFK 392
TL++ S +G+ S A++
Sbjct: 724 AYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVI 783
Query: 393 NKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKK 452
K+ +S + P+ + + +I G+C L+ A L M G P+ +Y+ ++ + +
Sbjct: 784 GKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEA 842
Query: 453 DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
++++ + D F D +Y L++ LC ++ A L M+ +GI+ + Y
Sbjct: 843 GDIESAI---DLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSY 899
Query: 513 TSLAYAYWKSGKTSVASNVLEEMA 536
L S T A V+++MA
Sbjct: 900 EKLLQCLCYSRLTMEAVKVVKDMA 923
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 186/429 (43%), Gaps = 27/429 (6%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
P+V++ ++ +V K A + + M L+P + + ++ SL K G
Sbjct: 545 PDVDTYLI--VVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+ ++++ G+ + Y +I+ +++ ++ A +L+ E+ + + P FTY LIS +
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNH 299
K GM + DKM +G++ ++V Y +LI F K+G + + +F + D +H
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDH 722
Query: 300 VTYTTLIDGYCKANELDQALKV----------RELMEAKGLYPGVATYNSILRKLCQDGR 349
+ Y TL+ G +A + +V + L+ K L SI L G
Sbjct: 723 IAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLV-------SIPSSLGNYGS 775
Query: 350 IRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
A +++ ++ +K + + NT+I Y G L A M + G+ P+ TY
Sbjct: 776 KSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTI 834
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK-KDNVDAILALPDEFLSK 468
L+ + ++ESA +L G P YS ++ G C K +DA LAL E
Sbjct: 835 LMKSHIEAGDIESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDA-LALMLEMQKS 890
Query: 469 GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
G+ + Y L++ LC A K+ M I S+ +T L Y + K A
Sbjct: 891 GINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREA 950
Query: 529 SNVLEEMAK 537
+ M +
Sbjct: 951 RALFAIMVQ 959
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 5/333 (1%)
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNE-MEEKGVVPDIFTYNTLISLYCKKGM 246
V +G+ L+ Y LI ++ A+ N+ + G+VPD ++++ K
Sbjct: 87 VDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRR 146
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTT-- 304
EA + D++ G S + ++ C + R EA F ++K+ +
Sbjct: 147 FDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKR 206
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYP-GVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
L G C L++A+ + + + P V Y S+ C+ G +A L + M
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
D + L+ Y K ++ A++ +M+E + DP + LIHGF K+ L+
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL-PDEFLSKGLCLDASVYRALIR 482
+ + M+ G + +Y ++ YCK+ NVD L L + S+ + + Y LI
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 483 RLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
K ++ A L M NGI D + Y L
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVL 419
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 154/359 (42%), Gaps = 7/359 (1%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
YA++ +A ++ E++ + L+P TVL+S +K G + ++++DG+ N
Sbjct: 627 YARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPN 686
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ +Y LI K D + + L M E + D Y TL+S + + +
Sbjct: 687 VVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIV 746
Query: 256 KMEREGINLDIVSYNSLIY---GFCKEGRMREATRMFSEIKDAT-PNHVTYTTLIDGYCK 311
+ +E + ++ L+ G A + ++K + PN + T+I GYC
Sbjct: 747 EPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCA 806
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
A LD+A E M+ +G+ P + TY +++ + G I A L + + D +
Sbjct: 807 AGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTN---CEPDQVM 863
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
+TL+ AL +M +SG+ P+ +Y+ L+ C A +++ M
Sbjct: 864 YSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMA 923
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
P +++W++ C++ + AL + G L L++ L + +Q+
Sbjct: 924 ALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTKPGLLKMLNQNQQL 982
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 46/257 (17%)
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKN-KMLESGLKPDPFTYKALIHGFCKMDEL 420
+ ++ D+ LI +++G A F N +++ +G+ PD +++ K+
Sbjct: 88 DNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRF 147
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF--------------L 466
+ A+ L ++ +G+ PS S S +VD C +D ++ L
Sbjct: 148 DEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRL 207
Query: 467 SKGLC----------------------LDASVYRALIRRLCKIEQIECAEKLFYHMEGNG 504
KGLC L ++Y++L CK AE LF HME +G
Sbjct: 208 FKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDG 267
Query: 505 ISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKV--- 561
D V+YT L Y K ++A + M +R + I++ HG K+
Sbjct: 268 YYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI----HGFMKLGML 323
Query: 562 --SQMFWDHVVERGLMS 576
++ + ++++G+ S
Sbjct: 324 DKGRVMFSQMIKKGVQS 340
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 202/424 (47%), Gaps = 43/424 (10%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A VF+ + +P L + T LL+++ + I + Q G L+ +N +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG-- 261
+A S+S ++E A Q L +M+E G+ P TYNTLI Y G + + D M EG
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 262 -INLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQA 318
+ +I ++N L+ +CK+ ++ EA + ++++ P+ VTY T+ Y + E +A
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 319 LK--VRELMEAKGLYPGVATYNSILRKLCQDGRIRDA-------------------NKLL 357
V +++ + P T ++ C++GR+RD N L+
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 358 NE----------------MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK 401
N M E V+AD IT +T++NA+S G ++ A + +M+++G+K
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL 461
PD Y L G+ + E + A+ELL ++ P+ ++ ++ G+C ++D + +
Sbjct: 363 PDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRV 421
Query: 462 PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWK 521
++ G+ + + L+ +++Q AE++ M G G+ ++ + LA A+
Sbjct: 422 FNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRV 481
Query: 522 SGKT 525
+G T
Sbjct: 482 AGLT 485
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 150/364 (41%), Gaps = 82/364 (22%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
+++S + ++ +++S +DA+Q +M+ L P L+ G +
Sbjct: 112 KLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSE 171
Query: 183 IHKRLVQDG---VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL-- 237
+ ++++G V NI +N L+ A K + VE A +++ +MEE GV PD TYNT+
Sbjct: 172 LLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIAT 231
Query: 238 -----------------------------------ISLYCKKGMHYEALSIQDKMEREGI 262
+ YC++G + L +M+ +
Sbjct: 232 CYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 263 NLDIVSYNSLIYGFCK-----------------------------------EGRMREATR 287
++V +NSLI GF + G M +A +
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 288 MFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRE--LMEAKGLYPGVATYNSILRK 343
+F E+ A P+ Y+ L GY +A E +A ++ E ++E++ P V + +++
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR---PNVVIFTTVISG 408
Query: 344 LCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD 403
C +G + DA ++ N+M + V + T TL+ Y ++ A + M G+KP+
Sbjct: 409 WCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 468
Query: 404 PFTY 407
T+
Sbjct: 469 NSTF 472
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 33/220 (15%)
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+A V + + G P + +Y ++L + + + +++E+ + + D+I N +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
NA+S+ G+++ A++ KM E GL P TY LI G+ + E + ELL ML+ G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG-- 180
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
NVD + + + L++ CK +++E A ++
Sbjct: 181 -----------------NVD-------------VGPNIRTFNVLVQAWCKKKKVEEAWEV 210
Query: 497 FYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA-SNVLEEM 535
ME G+ D+V Y ++A Y + G+T A S V+E+M
Sbjct: 211 VKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKM 250
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 121/244 (49%), Gaps = 3/244 (1%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N + +V Y + +D L+ +M+ +++ +L L++ ++ + + ++
Sbjct: 259 NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVL 318
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ + V ++ Y+ +++A S + +E+A Q+ EM + GV PD Y+ L Y +
Sbjct: 319 TLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRA 378
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTY 302
+A + + + E ++V + ++I G+C G M +A R+F+++ +PN T+
Sbjct: 379 KEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 437
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
TL+ GY + + +A +V ++M G+ P +T+ + G ++NK +N +
Sbjct: 438 ETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKC 497
Query: 363 KKVQ 366
K ++
Sbjct: 498 KDIE 501
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 184/386 (47%), Gaps = 40/386 (10%)
Query: 136 YAKSRMTQDALQVFEQMRLYQ--LKPHLPACTVLLSSLLK--DGTTNVVWKIHKRLVQDG 191
Y + D +++F+ + Q +P +LLS + D + + V ++ +V +G
Sbjct: 95 YGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNG 154
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK-KGMHYEA 250
+ + + + + ++ V+ AK L+ E+ EK PD +TYN L+ CK K +H
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH--- 211
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYC 310
++Y F E R + D P+ V++T LID C
Sbjct: 212 ---------------------VVYEFVDEMR---------DDFDVKPDLVSFTILIDNVC 241
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
+ L +A+ + + G P YN+I++ C + +A + +M E+ V+ D I
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
T NTLI SK G ++ A + M+++G +PD TY +L++G C+ E A LL M
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEM 361
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
G P+ C+Y+ ++ G CK +D + L + S G+ L+++ Y L+R L K ++
Sbjct: 362 EARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKV 421
Query: 491 ECAEKLF-YHMEGNGISGDSVIYTSL 515
A ++F Y ++ +S D+ Y++L
Sbjct: 422 AEAYEVFDYAVDSKSLS-DASAYSTL 446
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 3/295 (1%)
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANE 314
M G+ D V+ + + C+ GR+ EA + E+ K + P+ TY L+ CK +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 315 LDQALK-VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
L + V E+ + + P + ++ ++ +C +R+A L++++ + D N
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
T++ + + A+ KM E G++PD TY LI G K +E A+ L M+DA
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
G+ P +Y+ +++G C+K L+L +E ++G + Y L+ LCK ++
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKG 389
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
+L+ M+ +G+ +S Y +L + KSGK + A V + + + A YS
Sbjct: 390 MELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYS 444
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 130/284 (45%), Gaps = 7/284 (2%)
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPN----HVTYTTLIDGYCKA--NEL 315
I LD+ +NS++ + + + ++F I + PN T+ L+ C+A + +
Sbjct: 81 IPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSI 140
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
+V LM GL P T + +R LC+ GR+ +A L+ E++EK D T N L
Sbjct: 141 SNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFL 200
Query: 376 INAYSKIGDLKSALKFKNKMLES-GLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+ K DL +F ++M + +KPD ++ LI C L A L+ + +AG
Sbjct: 201 LKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
F P Y+ I+ G+C + + + +G+ D Y LI L K ++E A
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
M G D+ YTSL + G++ A ++LEEM R
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEAR 364
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 45/287 (15%)
Query: 118 IHDDPEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
+ DD +V ++S+ L+ + S+ ++A+ + ++ KP ++
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
+ ++K++ ++GV + YN LI SK+ VE A+ L M + G PD TY
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA 295
+L++ C+KG ALS+ ++ME G + +YN+L++G
Sbjct: 340 SLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL------------------- 380
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
CKA +D+ +++ E+M++ G+ Y +++R L + G++ +A +
Sbjct: 381 --------------CKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYE 426
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
+ + + K +D +AYS L++ LK+ K E GL P
Sbjct: 427 VFDYAVDSKSLSD-------ASAYST---LETTLKWLKKAKEQGLVP 463
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 213/483 (44%), Gaps = 27/483 (5%)
Query: 57 SFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXX 116
S WV YT S+ +++ + + K F A + D++ R
Sbjct: 138 SLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAP--------- 188
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVL--LSSLLKD 174
+ S L+ + K M AL ++M ++ L + L LS L D
Sbjct: 189 --------DRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD 240
Query: 175 GTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTY 234
+ + I RL + G+ ++ YN +I+ K++ A+ L+ EM E GV+P+ +Y
Sbjct: 241 YSKAI--SIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSY 298
Query: 235 NTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK- 293
+TL+S+Y + EALS+ +M+ LD+ + N +I + + ++EA R+F ++
Sbjct: 299 STLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRK 358
Query: 294 -DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
D PN V+Y T++ Y +A +A+ + LM+ K + V TYN++++ +
Sbjct: 359 MDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEK 418
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
A L+ EM + ++ + IT +T+I+ + K G L A K+ SG++ D Y+ +I
Sbjct: 419 ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIV 478
Query: 413 GFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL 472
+ ++ + AK LL + P + + + K + + + G
Sbjct: 479 AYERVGLMGHAKRLLHELKLPDNIPRETAITIL----AKAGRTEEATWVFRQAFESGEVK 534
Query: 473 DASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVL 532
D SV+ +I + ++ ++F M G DS + + AY K + A V
Sbjct: 535 DISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVY 594
Query: 533 EEM 535
EM
Sbjct: 595 REM 597
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 190/394 (48%), Gaps = 8/394 (2%)
Query: 159 PHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQL 218
P + A V+L ++L+ ++ + + Q + + Y Y+ LI + K + A
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 219 LNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCK 278
L +ME+ V D+ Y+ LI L + + +A+SI +++R GI D+V+YNS+I + K
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 279 EGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVAT 336
REA + E+ +A PN V+Y+TL+ Y + ++ +AL V M+ + T
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 337 YNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML 396
N ++ Q +++A++L + + ++ + ++ NT++ Y + A+ M
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 397 ESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
++ + TY +I + K E E A L+ M G P+ +YS I+ + K +D
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452
Query: 457 AILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME-GNGISGDSVIYTSL 515
L + S G+ +D +Y+ +I ++ + A++L + ++ + I ++ I T L
Sbjct: 453 RAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI-TIL 511
Query: 516 AYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSC 549
A K+G+T A+ V + + + ++ C
Sbjct: 512 A----KAGRTEEATWVFRQAFESGEVKDISVFGC 541
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 165/406 (40%), Gaps = 72/406 (17%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
Y + M ++A ++F +R ++P++ + +L + + + + + + N
Sbjct: 340 YGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQN 399
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ YN +I K+ + E+A L+ EM+ +G+ P+ TY+T+IS++ K G A ++
Sbjct: 400 VVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQ 459
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANEL 315
K+ G+ +D V Y ++I + + G M A R+ E+K P+++ T I KA
Sbjct: 460 KLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK--LPDNIPRETAITILAKAGRT 517
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
++A + R+ + G ++D + +
Sbjct: 518 EEA-------------------TWVFRQAFESGEVKDIS----------------VFGCM 542
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
IN YS+ + ++ KM +G PD +++ + K E E A + M + G
Sbjct: 543 INLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG- 601
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEK 495
C + PDE + L L +S + E E
Sbjct: 602 ----CVF-------------------PDEVHFQMLSLYSSK-----------KDFEMVES 627
Query: 496 LFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
LF +E + ++ +A Y ++ K + AS V+ M +R ++
Sbjct: 628 LFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGIL 673
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 172/408 (42%), Gaps = 24/408 (5%)
Query: 56 ISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXX 115
S FF+W+ S YT + L K K A+ LD +
Sbjct: 95 FSLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKP----------- 143
Query: 116 XRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
+P + Q + L ++ + ++A++V+ ++ + + C +L LK
Sbjct: 144 -----EPTLLEQYVKCL----SEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKAR 194
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
+ W++HK +V+ + CLI A DV +LL + ++G+ P + Y
Sbjct: 195 KLDRFWELHKEMVES--EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYA 252
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA 295
LIS +C+ G + + M + Y +I G C + EA +F +KD
Sbjct: 253 KLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDK 312
Query: 296 --TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
P+ V YTT+I G+C+ L A K+ M KG+ P YN ++ + G I
Sbjct: 313 GYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLV 372
Query: 354 NKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHG 413
NEM ++CNT+I + G A + M E+G+ P+ TY ALI G
Sbjct: 373 EAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKG 432
Query: 414 FCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL 461
FCK +++E +L + G PS +Y+ +V D+V L L
Sbjct: 433 FCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 4/306 (1%)
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNS 271
VE A ++ N +++ G+ + T N+++ L C K + K E D
Sbjct: 161 VEEAIEVYNVLKDMGISSSVVTCNSVL-LGCLKARKLDRFWELHKEMVES-EFDSERIRC 218
Query: 272 LIYGFCKEGRMREATRMFSE--IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKG 329
LI C G + E + + + P Y LI G+C+ +V M A
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 330 LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
+P + Y I++ LC + + +A + + +K D + T+I + + G L SA
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 390 KFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGY 449
K +M++ G++P+ F Y +IHG K E+ + ML G+ + S + ++ G+
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 450 CKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDS 509
C D + G+ +A Y ALI+ CK ++E KL+ ++ G+
Sbjct: 399 CSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSG 458
Query: 510 VIYTSL 515
+ Y +L
Sbjct: 459 MAYAAL 464
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 139/336 (41%), Gaps = 47/336 (13%)
Query: 267 VSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGY--CKANE--LDQALKVR 322
VS N +++G +G+ +A + F + P TL++ Y C + E +++A++V
Sbjct: 114 VSLN-ILFGALLDGKAVKAAKSFLDTTGFKPE----PTLLEQYVKCLSEEGLVEEAIEVY 168
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
+++ G+ V T NS+L + ++ +L EM E + ++ I C LI A
Sbjct: 169 NVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRC--LIRALCDG 226
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML----------- 431
GD+ + + L+ GL P + Y LI GFC++ E+L M+
Sbjct: 227 GDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIY 286
Query: 432 ------------------------DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
D G+ P Y+ ++ G+C+K + + L E +
Sbjct: 287 QKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIK 346
Query: 468 KGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSV 527
KG+ + Y +I K +I E + M NG G + ++ + GK+
Sbjct: 347 KGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDE 406
Query: 528 ASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQ 563
A + + M++ + A Y+ + ENKV +
Sbjct: 407 AFEIFKNMSETGVTPNAITYNAL-IKGFCKENKVEK 441
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 37/380 (9%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
YN +I K R + A L++ M+ + V I T+ LI Y + G+ EA+ ++ME
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-TPNHVTYTTLIDGYCKANELDQ 317
G D ++++ +I ++ R EA F +KD P+ + YT L+ G+C+A E+ +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISE 273
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
A KV + M+ G+ P V TY+ ++ LC+ G+I A+ + +M + + IT N L+
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 333
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL---------- 427
+ K G + L+ N+M + G +PD TY LI C+ + LE+A ++L
Sbjct: 334 VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEV 393
Query: 428 -------------------------FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALP 462
M++A P+ +Y+ ++ + + D +L +
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMK 453
Query: 463 DEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM-EGNGISGDSVIYTSLAYAYWK 521
E K + + + YR L+ C + A KLF M E ++ +Y + +
Sbjct: 454 KEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513
Query: 522 SGKTSVASNVLEEMAKRRLI 541
+G+ ++E+M ++ L+
Sbjct: 514 AGQLKKHEELVEKMIQKGLV 533
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/512 (21%), Positives = 209/512 (40%), Gaps = 109/512 (21%)
Query: 18 IVKGHW-GNLLKVNNAPVLSSTTIHQVLL---QLSLNGYGPSI----------------- 56
I+K H+ N N+A + S T+H + L Q+ + PS+
Sbjct: 71 IIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPL 130
Query: 57 --SFPFFKWVESTPHYTHSLQCSW-AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXX 113
S FF W S Y H + MI + K + F A ++D + R+
Sbjct: 131 HQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNV-------- 182
Query: 114 XXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSL-- 171
E++ + + L+ Y ++ + +A+ F +M Y P A ++++S+L
Sbjct: 183 ---------EISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSR 233
Query: 172 -------------LKDGT-------TNVV--W----------KIHKRLVQDGVVLNIYIY 199
LKD TN+V W K+ K + G+ N+Y Y
Sbjct: 234 KRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTY 293
Query: 200 NCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER 259
+ +I A + + RA + +M + G P+ T+N L+ ++ K G + L + ++M++
Sbjct: 294 SIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKK 353
Query: 260 EGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQAL 319
G D ++YN LI C++ + A ++ + T+I C+ N
Sbjct: 354 LGCEPDTITYNFLIEAHCRDENLENAVKVLN-------------TMIKKKCEVN------ 394
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+T+N+I R + + + A+++ ++M E K + + +T N L+ +
Sbjct: 395 --------------ASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF 440
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG-FTPS 438
LK K +M + ++P+ TY+ L+ FC M +A +L M++ TPS
Sbjct: 441 VGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPS 500
Query: 439 YCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
Y ++ + + L ++ + KGL
Sbjct: 501 LSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 147/305 (48%), Gaps = 4/305 (1%)
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
+ + KRL+ DG N+ +YN +++ KS D+++A + M ++ PD+ T+N LI
Sbjct: 178 LAFDTMKRLI-DGKP-NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILI 235
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--AT 296
+ YC+ AL + +M+ +G ++VS+N+LI GF G++ E +M E+ +
Sbjct: 236 NGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCR 295
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
+ T L+DG C+ +D A + + K + P Y S++ KLC + + A ++
Sbjct: 296 FSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEM 355
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
+ E+ +K I C TL+ K G + A F KM+ +G+ PD T+ L+ C
Sbjct: 356 MEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCS 415
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
D A L G+ P +Y +V G+ K+ L +E L K + D
Sbjct: 416 SDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFT 475
Query: 477 YRALI 481
Y L+
Sbjct: 476 YNRLM 480
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 171/394 (43%), Gaps = 11/394 (2%)
Query: 58 FPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXR 117
F F W + + H M + LA F ++L +A
Sbjct: 97 FAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVA-------ANPCPCSSG 149
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGT 176
I PE+ + + Y ++R AL F+ M RL KP++ +++ +K G
Sbjct: 150 IFSCPEL-EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGD 208
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ + ++R+ ++ ++ +N LI+ +S + A L EM+EKG P++ ++NT
Sbjct: 209 MDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNT 268
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KD 294
LI + G E + + +M G + L+ G C+EGR+ +A + ++ K
Sbjct: 269 LIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKR 328
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
P+ Y +L++ C N+ +A+++ E + KG P +++ L + GR A+
Sbjct: 329 VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKAS 388
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
+ +M + D++T N L+ A + + G +PD TY L+ GF
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
K + + L+ MLD P +Y+ ++DG
Sbjct: 449 TKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDG 482
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 148/313 (47%), Gaps = 7/313 (2%)
Query: 234 YNTLISLYCK-KGMHYEALSIQDKMER--EGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
+ + I YC+ + M Y L+ D M+R +G ++ YN+++ G+ K G M +A R +
Sbjct: 160 FRSAIDAYCRARKMDYALLAF-DTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 291 EI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
+ + A P+ T+ LI+GYC++++ D AL + M+ KG P V ++N+++R G
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
+I + K+ EM E + TC L++ + G + A +L + P F Y
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 409 ALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSK 468
+L+ C ++ A E++ + G TP + + + +V+G K + ++ ++
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 469 GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
G+ D+ + L+R LC + A +L G D Y L + K G+
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEG 457
Query: 529 SNVLEEMAKRRLI 541
++ EM + ++
Sbjct: 458 EVLVNEMLDKDML 470
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y +S AL +F +M+ +P++ + L+ L G K+ +++ G
Sbjct: 234 LINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELG 293
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ L+ + V+ A L+ ++ K V+P F Y +L+ C + A+
Sbjct: 294 CRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAM 353
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGY 309
+ +++ ++G ++ +L+ G K GR +A+ ++ +A P+ VT+ L+
Sbjct: 354 EMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDL 413
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
C ++ A ++R L +KG P TY+ ++ ++GR ++ L+NEM +K + D
Sbjct: 414 CSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDI 473
Query: 370 ITCNTLINAYSKIG 383
T N L++ S G
Sbjct: 474 FTYNRLMDGLSCTG 487
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 2/190 (1%)
Query: 163 ACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM 222
C +L+ L ++G + + L+ V+ + + Y L+ RA +++ E+
Sbjct: 300 TCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEEL 359
Query: 223 EEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRM 282
+KG P TL+ K G +A +KM GI D V++N L+ C
Sbjct: 360 WKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHS 419
Query: 283 REATRM--FSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSI 340
+A R+ + K P+ TY L+ G+ K + + M K + P + TYN +
Sbjct: 420 TDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRL 479
Query: 341 LRKLCQDGRI 350
+ L G+
Sbjct: 480 MDGLSCTGKF 489
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A+++ E++ P ACT L+ L K G T ++++ G++ + +N L+
Sbjct: 352 AMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLR 411
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
S A +L KG PD TY+ L+S + K+G E + ++M + +
Sbjct: 412 DLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Query: 265 DIVSYNSLIYGFCKEGRM-REATRMF 289
DI +YN L+ G G+ R+ RM
Sbjct: 472 DIFTYNRLMDGLSCTGKFSRKQVRML 497
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 174/371 (46%), Gaps = 25/371 (6%)
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
R+H P V W +IH +MR ++ P ++ G
Sbjct: 103 RLHLHPTV------WSLIH---------------RMRSLRIGPSPKTFAIVAERYASAGK 141
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ K+ + + G ++ +N ++ KS+ VE+A +L + + V D TYN
Sbjct: 142 PDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNV 200
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--D 294
+++ +C +AL + +M GIN ++ +YN+++ GF + G++R A F E+K D
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRD 260
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
+ VTYTT++ G+ A E+ +A V + M +G+ P VATYN++++ LC+ + +A
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAV 320
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
+ EM + + + T N LI G+ + +M G +P+ TY +I +
Sbjct: 321 VMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYY 380
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG-YCKKDNVDAILALPDEFLSKGLCLD 473
+ E+E A L M P+ +Y+ ++ G + +K + D ++A F + L L
Sbjct: 381 SECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQ 440
Query: 474 ASVYRALIRRL 484
+ L+R+
Sbjct: 441 SKSGSRLLRKF 451
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 143/311 (45%), Gaps = 3/311 (0%)
Query: 228 VPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATR 287
V D +++ I + + +H S+ +M I ++ + + G+ +A +
Sbjct: 88 VHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVK 147
Query: 288 MFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
+F + + + ++ T++D CK+ +++A ++ + + TYN IL C
Sbjct: 148 LFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWC 206
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
R A ++L EM E+ + + T NT++ + + G ++ A +F +M + + D
Sbjct: 207 LIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVV 266
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
TY ++HGF E++ A+ + M+ G PS +Y+ ++ CKKDNV+ + + +E
Sbjct: 267 TYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEM 326
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKT 525
+ +G + + Y LIR L + E+L ME G + Y + Y + +
Sbjct: 327 VRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 386
Query: 526 SVASNVLEEMA 536
A + E+M
Sbjct: 387 EKALGLFEKMG 397
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 86/194 (44%), Gaps = 1/194 (0%)
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
L++ M ++ T + Y+ G A+K M E G D ++ ++ C
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
K +E A EL F L F+ +Y+ I++G+C L + E + +G+ + +
Sbjct: 173 KSKRVEKAYEL-FRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
Y +++ + QI A + F M+ D V YT++ + + +G+ A NV +EM
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 536 AKRRLIITAKIYSC 549
+ ++ + Y+
Sbjct: 292 IREGVLPSVATYNA 305
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 142/285 (49%), Gaps = 12/285 (4%)
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
R+ + GV +Y LI A + +V +A++ + K +VPD+FTY +I+ YC+
Sbjct: 590 RMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLN 649
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTL 305
+A ++ + M+R + D+V+Y+ L+ + RE E D P+ V YT +
Sbjct: 650 EPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREM-----EAFDVIPDVVYYTIM 704
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
I+ YC N+L + + + M+ + + P V TY +L+ + L EM V
Sbjct: 705 INRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPERNLSREMKAFDV 757
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ D LI+ KIGDL A + ++M+ESG+ PD Y ALI CKM L+ AK
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKM 817
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
+ M+++G P Y+ ++ G C+ V + L E L KG+
Sbjct: 818 IFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 168/394 (42%), Gaps = 15/394 (3%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
+N ++S ++ Y + +A +F++ R + V +L K G ++
Sbjct: 359 INCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIEL 418
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
+ + G+ ++ Y LI C A L+ EM+ G PDI YN L
Sbjct: 419 FREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLAT 478
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYT 303
G+ EA ME G+ V++N +I G G + +A + ++ + +
Sbjct: 479 NGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREN--DA 536
Query: 304 TLIDGYCKANELDQALKVRELMEAKGLYP-GVATYNSILRKLC-QDGRIRDANKLLNEMS 361
+++ G+C A LD A + +E +P + Y ++ LC + I A LL+ M
Sbjct: 537 SMVKGFCAAGCLDHAFERFIRLE----FPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMW 592
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
+ V+ + LI A+ ++ +++ A +F ++ + PD FTY +I+ +C+++E +
Sbjct: 593 KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
A L M P +YS ++ N D L + E + + D Y +I
Sbjct: 653 QAYALFEDMKRRDVKPDVVTYSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIMI 705
Query: 482 RRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
R C + ++ LF M+ I D V YT L
Sbjct: 706 NRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVL 739
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 121/544 (22%), Positives = 203/544 (37%), Gaps = 132/544 (24%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK----DGT 176
DP+V V S ++ + K+ A+ VF +M LK V++SS+L+ G
Sbjct: 323 DPDV--YVYSAIIEGHRKNMNIPKAVDVFNKM----LKKRKRINCVIVSSILQCYCQMGN 376
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ + + K + + L+ YN A K VE A +L EM KG+ PD+ Y T
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREA--TRMFSEIKD 294
LI C +G +A + +M+ G DIV YN L G G +EA T E +
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRG 496
Query: 295 ATPNHVTYTTLIDG-------------------------------YCKANELDQAL---- 319
P +VT+ +I+G +C A LD A
Sbjct: 497 VKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFI 556
Query: 320 --------------------------KVRELMEAK---GLYPGVATYNSILRKLCQDGRI 350
K ++L++ G+ P + Y ++ C+ +
Sbjct: 557 RLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNV 616
Query: 351 RDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
R A + + KK+ D T +IN Y ++ + K A M +KPD TY L
Sbjct: 617 RKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVL 676
Query: 411 ----------------------------IHGFCKMDELESAKELLFGMLDAGFTPSYCS- 441
I+ +C +++L+ L M P +
Sbjct: 677 LNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTY 736
Query: 442 ---------------------------YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
Y+ ++D CK ++ + D+ + G+ DA
Sbjct: 737 TVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDA 796
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
+ Y ALI CK+ ++ A+ +F M +G+ D V YT+L ++G A +++E
Sbjct: 797 APYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKE 856
Query: 535 MAKR 538
M ++
Sbjct: 857 MLEK 860
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 141/319 (44%), Gaps = 16/319 (5%)
Query: 206 CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLD 265
C++ + +A+ LL+ M + GV P+ Y LI +C+ +A + + + I D
Sbjct: 575 CAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Query: 266 IVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRE 323
+ +Y +I +C+ ++A +F ++K D P+ VTY+ L++ D L ++
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKR 687
Query: 324 LMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
MEA + P V Y ++ + C ++ L +M +++ D +T L+
Sbjct: 688 EMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN----- 742
Query: 384 DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYS 443
K +M +KPD F Y LI CK+ +L AK + M+++G P Y+
Sbjct: 743 --KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYT 800
Query: 444 WIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGN 503
++ CK + + D + G+ D Y ALI C+ + A KL M
Sbjct: 801 ALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEK 860
Query: 504 GISGDSVIYTSLAYAYWKS 522
GI +++ YA K+
Sbjct: 861 GIKPTKASLSAVHYAKLKA 879
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 15/333 (4%)
Query: 127 QVLSWLVIHYAKSRMTQDALQVFEQMRLYQL--KPHLPACTVLLSSLLKDGTTNVVWKIH 184
+V + LV YA M +A+ +F + Y L P + A L+S ++ G +++V
Sbjct: 147 RVSTALVKAYANLDMFDEAIDIFFRA-YYSLGRAPDIKALNFLISRMIASGRSDMVVGFF 205
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM---EEKGVVPDIFTYNTLISLY 241
+ + G+ + + Y ++ A ++ D E ++LL+ + E + P +F N + L
Sbjct: 206 WEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRN--PCVFYLNFIEGL- 262
Query: 242 CKKGMHYEALSIQDKMEREGINLDI----VSYNSLIYGFCKEGRMREATRMFSEIKD--A 295
C M A + + I +D ++Y ++ G C E R+ +A + +++
Sbjct: 263 CLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGI 322
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ Y+ +I+G+ K + +A+ V M K +SIL+ CQ G +A
Sbjct: 323 DPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYD 382
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
L E E + D + N +A K+G ++ A++ +M G+ PD Y LI G C
Sbjct: 383 LFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCC 442
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
+ A +L+ M G TP Y+ + G
Sbjct: 443 LQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGG 475
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 127/271 (46%), Gaps = 12/271 (4%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ + + + A + FE + ++ P L T+++++ + + + + + +
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRD 665
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
V ++ Y+ L+++ D++R EME V+PD+ Y +I+ YC +
Sbjct: 666 VKPDVVTYSVLLNS-DPELDMKR------EMEAFDVIPDVVYYTIMINRYCHLNDLKKVY 718
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCK 311
++ M+R I D+V+Y L+ + RE D P+ YT LID CK
Sbjct: 719 ALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAF-----DVKPDVFYYTVLIDWQCK 773
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
+L +A ++ + M G+ P A Y +++ C+ G +++A + + M E V+ D +
Sbjct: 774 IGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVP 833
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
LI + G + A+K +MLE G+KP
Sbjct: 834 YTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 130/320 (40%), Gaps = 8/320 (2%)
Query: 226 GVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREA 285
G PDI N LIS G + ++ER G++ D +Y ++ + E
Sbjct: 177 GRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEEL 236
Query: 286 TRMFSE--IKDATPNHVTYTTLIDGYCKANELDQA-LKVRELMEAKGLYP----GVATYN 338
++ S I + V Y I+G C D A ++ L +A L G+A Y
Sbjct: 237 EKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIA-YR 295
Query: 339 SILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES 398
++R LC + RI DA ++ +M + + D + +I + K ++ A+ NKML+
Sbjct: 296 KVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKK 355
Query: 399 GLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAI 458
+ + +++ +C+M A +L + + Y+ D K V+
Sbjct: 356 RKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEA 415
Query: 459 LALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
+ L E KG+ D Y LI C + A L M+G G + D VIY LA
Sbjct: 416 IELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGG 475
Query: 519 YWKSGKTSVASNVLEEMAKR 538
+G A L+ M R
Sbjct: 476 LATNGLAQEAFETLKMMENR 495
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%)
Query: 151 QMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSR 210
+M+ + +KP + TVL+ K G +I ++++ GV + Y LI C K
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 211 DVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYN 270
++ AK + + M E GV PD+ Y LI+ C+ G +A+ + +M +GI S +
Sbjct: 811 YLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Query: 271 SLIYGFCKEGRMR 283
++ Y K +R
Sbjct: 871 AVHYAKLKAKGLR 883
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 128/345 (37%), Gaps = 56/345 (16%)
Query: 215 AKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIY 274
A L +E +P + Y T+I + C G+ + + ++ R G S L+
Sbjct: 74 ALSFLKRIEGNVTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLK 133
Query: 275 GFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVR-ELMEAKGLYPG 333
G M ++ + + T L+ Y + D+A+ + + G P
Sbjct: 134 AI---GEMEQSLVLLIRVS---------TALVKAYANLDMFDEAIDIFFRAYYSLGRAPD 181
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
+ N ++ ++ GR + ++ + +I L
Sbjct: 182 IKALNFLISRMIASGR----------------------SDMVVGFFWEIERL-------- 211
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
GL D TY ++ + D+ E ++LL +L + Y ++G C
Sbjct: 212 -----GLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQ 266
Query: 454 NVDAILALPDEFLSKGLCLDAS----VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDS 509
D L + +D S YR ++R LC +IE AE + ME +GI D
Sbjct: 267 MTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDV 326
Query: 510 VIYTSLAYAYWKSGKTSVASNVLEEMAKRR----LIITAKIYSCF 550
+Y+++ + K+ A +V +M K+R +I + I C+
Sbjct: 327 YVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCY 371
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 161/343 (46%), Gaps = 25/343 (7%)
Query: 32 APVLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFK 91
+P+ S T + +++ S P ++ F + P++ HS +I L + ++F
Sbjct: 46 SPIGSPTRVQKLIASQS----DPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFN 101
Query: 92 TAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSW-------------------L 132
+L K + +++ + ++ +VLS L
Sbjct: 102 LIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRIL 161
Query: 133 VIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGV 192
+ + Q A ++F+ RL+ + P+ + +L+ + + ++ +++ ++++ V
Sbjct: 162 DVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDV 221
Query: 193 VLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
V ++ Y LI + V A +LL++M KG VPD +Y TL++ C+K EA
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYK 281
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYC 310
+ +M+ +G N D+V YN++I GFC+E R +A ++ ++ +PN V+Y TLI G C
Sbjct: 282 LLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLC 341
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
D+ K E M +KG P + N +++ C G++ +A
Sbjct: 342 DQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 158/349 (45%), Gaps = 3/349 (0%)
Query: 166 VLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEK 225
+L+ L + N++ + + G L I+ LI ++++ E+ +M E
Sbjct: 89 ILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEF 148
Query: 226 GVVPDIFTYNTLIS-LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
P N ++ L +G +A + G+ + SYN L+ FC +
Sbjct: 149 NFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSI 208
Query: 285 ATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
A ++F ++ +D P+ +Y LI G+C+ +++ A+++ + M KG P +Y ++L
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
LC+ ++R+A KLL M K D + NT+I + + A K + ML +G P
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALP 462
+ +Y+ LI G C + K+ L M+ GF+P + + +V G+C V+ +
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVV 388
Query: 463 DEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVI 511
+ + G L + + +I +C ++ E + I+GD+ I
Sbjct: 389 EVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRI 437
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%)
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
L +A ++ + G+ P +YN +++ C + + A +L +M E+ V D +
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
LI + + G + A++ + ML G PD +Y L++ C+ +L A +LL M G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
P Y+ ++ G+C++D + D+ LS G ++ YR LI LC + +
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
K M G S + L + GK A +V+E + K
Sbjct: 351 KYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 393
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 112/274 (40%), Gaps = 10/274 (3%)
Query: 287 RMFSEIKDATPNHVT---------YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATY 337
R F+ I D H + +T LI Y +A ++ L M P
Sbjct: 98 RYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHL 157
Query: 338 NSILRKLC-QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML 396
N IL L G ++ A +L V + + N L+ A+ DL A + KML
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 397 ESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
E + PD +YK LI GFC+ ++ A ELL ML+ GF P SY+ +++ C+K +
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 457 AILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLA 516
L KG D Y +I C+ ++ A K+ M NG S +SV Y +L
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 517 YAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
G LEEM + + +C
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCL 371
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 165/356 (46%), Gaps = 7/356 (1%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y+ + K++ +R K+ + M +V + T ++ + G EA+ I D++
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVT-LNTVAKIMRRFAGAGEWEEAVGIFDRLG 182
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD-ATPNHVTYTTLIDGYCKANELDQ 317
G+ + S N L+ CKE R+ +A + ++K TPN T+ I G+CKAN +++
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
AL + M+ G P V +Y +I+R CQ ++L+EM ++IT T+++
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL-FGMLDAGFT 436
+ + + + AL+ +M SG KPD Y LIH + LE A+ + M + G +
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC-LDASVYRALIRRLCKIEQIECAEK 495
+ +Y+ ++ YC D D + L E S LC D Y+ L+R K + K
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 496 LFYHM-EGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
L M + +S D YT L ++ A + EEM + IT + +C
Sbjct: 423 LLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD--ITPRHRTCL 476
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 185/441 (41%), Gaps = 80/441 (18%)
Query: 35 LSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQ 94
LS +H++L + + + KW ES + HS + IL K K + +
Sbjct: 85 LSDGLVHKLLHRFRDDWRS---ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMK 141
Query: 95 QMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRL 154
+ ++ R+ D V ++ ++ +A + ++A+ +F+++
Sbjct: 142 EFVE------------------RMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 155 YQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVL---------NIYIYNCLIHA 205
+ L+ + + +LL +L K+ KR+ Q VVL N + +N IH
Sbjct: 184 FGLEKNTESMNLLLDTLCKE----------KRVEQARVVLLQLKSHITPNAHTFNIFIHG 233
Query: 206 CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK--------------------- 244
K+ VE A + EM+ G P + +Y T+I YC++
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 245 GMHY--------------EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
+ Y EAL + +M+R G D + YN LI+ + GR+ EA R+F
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
Query: 291 -EIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGL-YPGVATYNSILRKLCQ 346
E+ + + N TY ++I YC +E D+A+++ + ME+ L P V TY +LR +
Sbjct: 354 VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 347 DGRIRDANKLLNEMSEK-KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
G + + KLL EM K + D T LI + + A +M+ + P
Sbjct: 414 RGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHR 473
Query: 406 TYKALIHGFCKMDELESAKEL 426
T L+ K + ESA+ +
Sbjct: 474 TCLLLLEEVKKKNMHESAERI 494
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 165/356 (46%), Gaps = 7/356 (1%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y+ + K++ +R K+ + M +V + T ++ + G EA+ I D++
Sbjct: 124 YDMAVDILGKAKKWDRMKEFVERMRGDKLVT-LNTVAKIMRRFAGAGEWEEAVGIFDRLG 182
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD-ATPNHVTYTTLIDGYCKANELDQ 317
G+ + S N L+ CKE R+ +A + ++K TPN T+ I G+CKAN +++
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
AL + M+ G P V +Y +I+R CQ ++L+EM ++IT T+++
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL-FGMLDAGFT 436
+ + + + AL+ +M SG KPD Y LIH + LE A+ + M + G +
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC-LDASVYRALIRRLCKIEQIECAEK 495
+ +Y+ ++ YC D D + L E S LC D Y+ L+R K + K
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 496 LFYHM-EGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
L M + +S D YT L ++ A + EEM + IT + +C
Sbjct: 423 LLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQD--ITPRHRTCL 476
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 185/441 (41%), Gaps = 80/441 (18%)
Query: 35 LSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQ 94
LS +H++L + + + KW ES + HS + IL K K + +
Sbjct: 85 LSDGLVHKLLHRFRDDWRS---ALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMK 141
Query: 95 QMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRL 154
+ ++ R+ D V ++ ++ +A + ++A+ +F+++
Sbjct: 142 EFVE------------------RMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 155 YQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVL---------NIYIYNCLIHA 205
+ L+ + + +LL +L K+ KR+ Q VVL N + +N IH
Sbjct: 184 FGLEKNTESMNLLLDTLCKE----------KRVEQARVVLLQLKSHITPNAHTFNIFIHG 233
Query: 206 CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK--------------------- 244
K+ VE A + EM+ G P + +Y T+I YC++
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 245 GMHY--------------EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
+ Y EAL + +M+R G D + YN LI+ + GR+ EA R+F
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
Query: 291 -EIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGL-YPGVATYNSILRKLCQ 346
E+ + + N TY ++I YC +E D+A+++ + ME+ L P V TY +LR +
Sbjct: 354 VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 347 DGRIRDANKLLNEMSEK-KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
G + + KLL EM K + D T LI + + A +M+ + P
Sbjct: 414 RGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHR 473
Query: 406 TYKALIHGFCKMDELESAKEL 426
T L+ K + ESA+ +
Sbjct: 474 TCLLLLEEVKKKNMHESAERI 494
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 207/458 (45%), Gaps = 39/458 (8%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
T+D ++ + LK + LL + L+ + + ++ + + G L+I+ YN
Sbjct: 184 TEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNM 243
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
L+ A +K E+A Q+ +M+++ D +TY +I + G EA+ + ++M EG
Sbjct: 244 LLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEG 300
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANEL---D 316
+ L++V YN+L+ K + +A ++FS + + PN TY+ L++ +L D
Sbjct: 301 LTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLD 360
Query: 317 QALKVRELMEAKGLYPGVA-----------------------------TYNSILRKLCQD 347
+++ + +G+Y + +Y S+L LC
Sbjct: 361 GVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA 420
Query: 348 GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
G+ +A ++L+++ EK V D + NT+ +A K+ + KM + G PD FTY
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480
Query: 408 KALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
LI F ++ E++ A + + + P SY+ +++ K +VD E
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 468 KGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSV 527
KGL D Y L+ K E++E A LF M G + V Y L K+G+T+
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 528 ASNVLEEMAKRRLIITAKIYSCFSVPD--GHGENKVSQ 563
A ++ +M ++ L + Y+ HG++++ +
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSRIRR 638
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 75/153 (49%)
Query: 120 DDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
D P + + L+ + + +A+ +FE++ KP + + L++ L K+G +
Sbjct: 471 DGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDE 530
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
K + + G+ ++ Y+ L+ K+ VE A L EM KG P+I TYN L+
Sbjct: 531 AHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD 590
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSL 272
K G EA+ + KM+++G+ D ++Y L
Sbjct: 591 CLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 201/428 (46%), Gaps = 15/428 (3%)
Query: 122 PEVNSQV--LSWL--VIHYAKS-RMTQDALQVFEQMRLYQLKP-HLPA--CTVLLSSLLK 173
PE+ +Q+ L ++ ++H +S ++ ++ R + +P +LP+ C V+L L
Sbjct: 157 PELETQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLN 216
Query: 174 DGTTNV-VWKIHKRLVQDGVV---LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVP 229
G V + + + +VQD L+ YN +I +K+ +E A + +E G
Sbjct: 217 QGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKI 276
Query: 230 DIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF 289
D TYN L+ L+ KG+ Y+A I + ME+ LD +Y +I K GR+ A ++F
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 290 SEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD 347
++K+ P+ +++L+D KA LD ++KV M+ G P + S++ +
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 348 GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
G++ A +L +EM + + + +I +++K G L+ A+ M ++G P P TY
Sbjct: 397 GKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Query: 408 KALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
L+ +++SA ++ M +AG P SY ++ K VD + E +
Sbjct: 457 SCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 516
Query: 468 KGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSV 527
G +D L+ + K ++ A K M +GI ++ I L + K+G
Sbjct: 517 MGYSVDVCASDVLMIYI-KDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDS 575
Query: 528 ASNVLEEM 535
A +LE +
Sbjct: 576 ARPLLETL 583
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 190/460 (41%), Gaps = 56/460 (12%)
Query: 60 FFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIH 119
F+W + P Y S +C + L + + F Q + +++ H
Sbjct: 191 LFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSS------------H 238
Query: 120 DDPEVNS--QVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
D N+ QV+ +L AK+ + A F++ + K L+ L G
Sbjct: 239 GDLSFNAYNQVIQYL----AKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLP 294
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
++I++ + + +L+ Y +I + +KS ++ A +L +M+E+ + P +++L
Sbjct: 295 YKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSL 354
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-- 295
+ K G ++ + +M+ G + SLI + K G++ A R++ E+K +
Sbjct: 355 VDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGF 414
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
PN YT +I+ + K+ +L+ A+ V + ME G P +TY+ +L
Sbjct: 415 RPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLL-------------- 460
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
EM Q D SA+K N M +GL+P +Y +L+
Sbjct: 461 ---EMHAGSGQVD------------------SAMKIYNSMTNAGLRPGLSSYISLLTLLA 499
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
++ A ++L M G++ C+ S ++ Y K +VD L S G+ +
Sbjct: 500 NKRLVDVAGKILLEMKAMGYSVDVCA-SDVLMIYIKDASVDLALKWLRFMGSSGIKTNNF 558
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+ R L K + A L + + D V+YTS+
Sbjct: 559 IIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSI 598
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 4/282 (1%)
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPG---VATYNSILRKLCQDGRIRDA 353
P+ Y L DG + + + E M G YN +++ L + ++ A
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVA 262
Query: 354 NKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHG 413
+ E + D T N L+ + G A + M ++ D TY+ +I
Sbjct: 263 FCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPS 322
Query: 414 FCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLD 473
K L++A +L M + PS+ +S +VD K +D + + E G
Sbjct: 323 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 474 ASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLE 533
A+++ +LI K +++ A +L+ M+ +G + +YT + ++ KSGK VA V +
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Query: 534 EMAKRRLIITAKIYSC-FSVPDGHGENKVSQMFWDHVVERGL 574
+M K + T YSC + G G+ + ++ + GL
Sbjct: 443 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/546 (21%), Positives = 236/546 (43%), Gaps = 44/546 (8%)
Query: 5 ENQRQFIDGVCAIIVKGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKWV 64
+N + D +C ++ W L+ N+ L H ++ + + FF+W
Sbjct: 82 QNHEKLEDTICRMMDNRAWTTRLQ-NSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWT 140
Query: 65 ESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEV 124
E + H MI++L + A+ +L D PE
Sbjct: 141 ERSGLIRHDRDTHMKMIKMLGEVSKLNHARCIL---------------------LDMPEK 179
Query: 125 ----NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
+ + L+ Y K+ + Q+++++F++M+ ++ + + L +L+ G +
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMA 239
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
+ ++V +GV + YN ++ S +E A + +M+ +G+ PD T+NT+I+
Sbjct: 240 KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 299
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPN 298
+C+ EA + +M+ I +VSY ++I G+ R+ + R+F E++ + PN
Sbjct: 300 FCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPN 359
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL----CQDGRIRDAN 354
TY+TL+ G C A ++ +A + + M AK + P NSI KL + G + A
Sbjct: 360 ATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP---KDNSIFLKLLVSQSKAGDMAAAT 416
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLE--------SGLKPDPFT 406
++L M+ V A+ LI K A+K + ++E L+ +P
Sbjct: 417 EVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSA 476
Query: 407 YKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFL 466
Y +I C + A E+LF L + + ++ G+ K+ N D+ +
Sbjct: 477 YNPIIEYLCNNGQTAKA-EVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMS 535
Query: 467 SKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTS 526
+G+ +++ Y LI+ + A+ M +G DS ++ S+ + ++ G+
Sbjct: 536 RRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQ 595
Query: 527 VASNVL 532
AS V+
Sbjct: 596 TASRVM 601
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 124/236 (52%), Gaps = 1/236 (0%)
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
+ LI+ Y KA + +++K+ + M+ G+ + +YNS+ + + + GR A + N+M
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
+ V+ T N ++ + L++AL+F M G+ PD T+ +I+GFC+ +++
Sbjct: 248 SEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
A++L M PS SY+ ++ GY D VD L + +E S G+ +A+ Y L+
Sbjct: 308 EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
Query: 482 RRLCKIEQIECAEKLFYHMEGNGIS-GDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
LC ++ A+ + +M I+ D+ I+ L + K+G + A+ VL+ MA
Sbjct: 368 PGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMA 423
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 6/269 (2%)
Query: 285 ATRMFSEIKDATP--NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP-GVATYNSIL 341
TR+ + I+D P +H ++ G A +L+ AL+ E GL T+ ++
Sbjct: 101 TTRLQNSIRDLVPEWDHSLVYNVLHG---AKKLEHALQFFRWTERSGLIRHDRDTHMKMI 157
Query: 342 RKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK 401
+ L + ++ A +L +M EK V D LI +Y K G ++ ++K KM + G++
Sbjct: 158 KMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVE 217
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL 461
+Y +L + AK M+ G P+ +Y+ ++ G+ ++ L
Sbjct: 218 RTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRF 277
Query: 462 PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWK 521
++ ++G+ D + + +I C+ ++++ AEKLF M+GN I V YT++ Y
Sbjct: 278 FEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLA 337
Query: 522 SGKTSVASNVLEEMAKRRLIITAKIYSCF 550
+ + EEM + A YS
Sbjct: 338 VDRVDDGLRIFEEMRSSGIEPNATTYSTL 366
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 163/345 (47%), Gaps = 3/345 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
T++A+ VF++M+ + KP ++++ K + + WK++ + NI Y
Sbjct: 267 TEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTA 326
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
L++A ++ E+A+++ +++E G+ PD++ YN L+ Y + G Y A I M+ G
Sbjct: 327 LVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG 386
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQAL 319
D SYN ++ + + G +A +F E+K P ++ L+ Y KA ++ +
Sbjct: 387 CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCE 446
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+ + M G+ P NS+L + G+ K+L EM AD T N LIN Y
Sbjct: 447 AIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIY 506
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
K G L+ + ++ E +PD T+ + I + + E+ M+D+G P
Sbjct: 507 GKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDG 566
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
+ ++ ++ V+ + ++ + KG+ + + V + + + L
Sbjct: 567 GTAKVLLSACSSEEQVEQVTSVL-RTMHKGVTVSSLVPKLMAKSL 610
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 171/386 (44%), Gaps = 7/386 (1%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVL---LSSLLK-DGTTNVVWKIHKRL 187
L+ Y + + + A V +M+ + + P TV + L+K G T + +R+
Sbjct: 218 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 277
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
+D YN +I+ K+ + +L EM P+I TY L++ + ++G+
Sbjct: 278 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 337
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTL 305
+A I ++++ +G+ D+ YN+L+ + + G A +FS ++ P+ +Y +
Sbjct: 338 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 397
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
+D Y +A A V E M+ G+ P + ++ +L + + ++ EMSE V
Sbjct: 398 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 457
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ D N+++N Y ++G K +M D TY LI+ + K LE +E
Sbjct: 458 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEE 517
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
L + + F P +++ + Y +K L + +E + G D + L+
Sbjct: 518 LFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACS 577
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVI 511
EQ+E + M G++ S++
Sbjct: 578 SEEQVEQVTSVLRTMH-KGVTVSSLV 602
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 10/349 (2%)
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
W + K Q V+ +N LI A + + A+ L ++ E VP TY LI
Sbjct: 166 WILRKSSFQPDVI----CFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKA 221
Query: 241 YCKKGMHYEALSIQDKMEREGIN---LDIVSYNSLIYGFCK-EGRMREATRMFSEIKD-- 294
YC G+ A + +M+ ++ + + YN+ I G K +G EA +F +K
Sbjct: 222 YCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR 281
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
P TY +I+ Y KA++ + K+ M + P + TY +++ ++G A
Sbjct: 282 CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAE 341
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
++ ++ E ++ D N L+ +YS+ G A + + M G +PD +Y ++ +
Sbjct: 342 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 401
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
+ A+ + M G P+ S+ ++ Y K +V A+ E G+ D
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 461
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
V +++ ++ Q EK+ ME + D Y L Y K+G
Sbjct: 462 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 510
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 6/313 (1%)
Query: 229 PDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRM 288
PD+ +N LI Y +K + EA S+ ++ +Y LI +C G + A +
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 289 FSEIKD--ATPNHV---TYTTLIDGYCK-ANELDQALKVRELMEAKGLYPGVATYNSILR 342
E+++ +P + Y I+G K ++A+ V + M+ P TYN ++
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
+ + + KL EM + + + T L+NA+++ G + A + ++ E GL+P
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALP 462
D + Y AL+ + + A E+ M G P SY+ +VD Y + A+
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 463 DEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKS 522
+E G+ + L+ K + E + M NG+ D+ + S+ Y +
Sbjct: 415 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 474
Query: 523 GKTSVASNVLEEM 535
G+ + +L EM
Sbjct: 475 GQFTKMEKILAEM 487
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 10/265 (3%)
Query: 119 HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
D E + V + L+ Y+++ A ++F M+ +P + +++ + + G +
Sbjct: 349 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
+ + + + G+ + + L+ A SK+RDV + + ++ EM E GV PD F N+++
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT-- 296
+LY + G + I +ME DI +YN LI + K G + +F E+K+
Sbjct: 469 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR 528
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P+ VT+T+ I Y + + L+V E M G P T +L + ++ +
Sbjct: 529 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSV 588
Query: 357 LNEMSE--------KKVQADNITCN 373
L M + K+ A ++T N
Sbjct: 589 LRTMHKGVTVSSLVPKLMAKSLTVN 613
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 6/287 (2%)
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANE 314
+ + D++ +N LI + ++ + +EA ++ ++ ++ P TY LI YC A
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 315 LDQALKVRELMEAKGLYP---GVATYNSILRKLCQ-DGRIRDANKLLNEMSEKKVQADNI 370
+++A V M+ + P GV YN+ + L + G +A + M + +
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
T N +IN Y K + K +M KP+ TY AL++ F + E A+E+ +
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
+ G P Y+ +++ Y + + G D + Y ++ +
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 491 ECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
AE +F M+ GI+ + L AY K+ + +++EM++
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 454
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 8/255 (3%)
Query: 297 PNHVTYTTLIDGYCKANELDQALKVR-ELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ + + LID Y + + +A + +L+E++ + P TY +++ C G I A
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV-PTEDTYALLIKAYCMAGLIERAEV 233
Query: 356 LLNEMSEKKVQADNITCNTLINAY-----SKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
+L EM V I T+ NAY + G+ + A+ +M KP TY +
Sbjct: 234 VLVEMQNHHVSPKTIGV-TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 292
Query: 411 IHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
I+ + K + + +L M P+ C+Y+ +V+ + ++ + + ++ GL
Sbjct: 293 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Query: 471 CLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASN 530
D VY AL+ + A ++F M+ G D Y + AY ++G S A
Sbjct: 353 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 412
Query: 531 VLEEMAKRRLIITAK 545
V EEM + + T K
Sbjct: 413 VFEEMKRLGIAPTMK 427
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 163/345 (47%), Gaps = 3/345 (0%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
T++A+ VF++M+ + KP ++++ K + + WK++ + NI Y
Sbjct: 245 TEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTA 304
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
L++A ++ E+A+++ +++E G+ PD++ YN L+ Y + G Y A I M+ G
Sbjct: 305 LVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG 364
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQAL 319
D SYN ++ + + G +A +F E+K P ++ L+ Y KA ++ +
Sbjct: 365 CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCE 424
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+ + M G+ P NS+L + G+ K+L EM AD T N LIN Y
Sbjct: 425 AIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIY 484
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
K G L+ + ++ E +PD T+ + I + + E+ M+D+G P
Sbjct: 485 GKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDG 544
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
+ ++ ++ V+ + ++ + KG+ + + V + + + L
Sbjct: 545 GTAKVLLSACSSEEQVEQVTSVL-RTMHKGVTVSSLVPKLMAKSL 588
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 171/386 (44%), Gaps = 7/386 (1%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVL---LSSLLK-DGTTNVVWKIHKRL 187
L+ Y + + + A V +M+ + + P TV + L+K G T + +R+
Sbjct: 196 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 255
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
+D YN +I+ K+ + +L EM P+I TY L++ + ++G+
Sbjct: 256 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 315
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTL 305
+A I ++++ +G+ D+ YN+L+ + + G A +FS ++ P+ +Y +
Sbjct: 316 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 375
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
+D Y +A A V E M+ G+ P + ++ +L + + ++ EMSE V
Sbjct: 376 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 435
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ D N+++N Y ++G K +M D TY LI+ + K LE +E
Sbjct: 436 EPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEE 495
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
L + + F P +++ + Y +K L + +E + G D + L+
Sbjct: 496 LFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACS 555
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVI 511
EQ+E + M G++ S++
Sbjct: 556 SEEQVEQVTSVLRTMH-KGVTVSSLV 580
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 10/349 (2%)
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
W + K Q V+ +N LI A + + A+ L ++ E VP TY LI
Sbjct: 144 WILRKSSFQPDVI----CFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKA 199
Query: 241 YCKKGMHYEALSIQDKMEREGIN---LDIVSYNSLIYGFCK-EGRMREATRMFSEIKD-- 294
YC G+ A + +M+ ++ + + YN+ I G K +G EA +F +K
Sbjct: 200 YCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDR 259
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
P TY +I+ Y KA++ + K+ M + P + TY +++ ++G A
Sbjct: 260 CKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAE 319
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
++ ++ E ++ D N L+ +YS+ G A + + M G +PD +Y ++ +
Sbjct: 320 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 379
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
+ A+ + M G P+ S+ ++ Y K +V A+ E G+ D
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
V +++ ++ Q EK+ ME + D Y L Y K+G
Sbjct: 440 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 488
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 6/313 (1%)
Query: 229 PDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRM 288
PD+ +N LI Y +K + EA S+ ++ +Y LI +C G + A +
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 289 FSEIKD--ATPNHV---TYTTLIDGYCK-ANELDQALKVRELMEAKGLYPGVATYNSILR 342
E+++ +P + Y I+G K ++A+ V + M+ P TYN ++
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
+ + + KL EM + + + T L+NA+++ G + A + ++ E GL+P
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALP 462
D + Y AL+ + + A E+ M G P SY+ +VD Y + A+
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 463 DEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKS 522
+E G+ + L+ K + E + M NG+ D+ + S+ Y +
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 523 GKTSVASNVLEEM 535
G+ + +L EM
Sbjct: 453 GQFTKMEKILAEM 465
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 2/244 (0%)
Query: 119 HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
D E + V + L+ Y+++ A ++F M+ +P + +++ + + G +
Sbjct: 327 EDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
+ + + + G+ + + L+ A SK+RDV + + ++ EM E GV PD F N+++
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT-- 296
+LY + G + I +ME DI +YN LI + K G + +F E+K+
Sbjct: 447 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR 506
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P+ VT+T+ I Y + + L+V E M G P T +L + ++ +
Sbjct: 507 PDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSV 566
Query: 357 LNEM 360
L M
Sbjct: 567 LRTM 570
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 6/287 (2%)
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANE 314
+ + D++ +N LI + ++ + +EA ++ ++ ++ P TY LI YC A
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 315 LDQALKVRELMEAKGLYP---GVATYNSILRKLCQ-DGRIRDANKLLNEMSEKKVQADNI 370
+++A V M+ + P GV YN+ + L + G +A + M + +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
T N +IN Y K + K +M KP+ TY AL++ F + E A+E+ +
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
+ G P Y+ +++ Y + + G D + Y ++ +
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 491 ECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
AE +F M+ GI+ + L AY K+ + +++EM++
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 432
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 8/255 (3%)
Query: 297 PNHVTYTTLIDGYCKANELDQALKVR-ELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ + + LID Y + + +A + +L+E++ + P TY +++ C G I A
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV-PTEDTYALLIKAYCMAGLIERAEV 211
Query: 356 LLNEMSEKKVQADNITCNTLINAY-----SKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
+L EM V I T+ NAY + G+ + A+ +M KP TY +
Sbjct: 212 VLVEMQNHHVSPKTIGV-TVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 270
Query: 411 IHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
I+ + K + + +L M P+ C+Y+ +V+ + ++ + + ++ GL
Sbjct: 271 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 471 CLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASN 530
D VY AL+ + A ++F M+ G D Y + AY ++G S A
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 390
Query: 531 VLEEMAKRRLIITAK 545
V EEM + + T K
Sbjct: 391 VFEEMKRLGIAPTMK 405
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 193/424 (45%), Gaps = 33/424 (7%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A VF+ + +P L + T LL+++ + I + Q G L+ +N +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG-- 261
+A S+S ++E A Q L +M+E G+ P TYNTLI Y G + + D M EG
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 262 -INLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQA 318
+ +I ++N L+ +CK+ ++ EA + ++++ P+ VTY T+ Y + E +A
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 319 LK--VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
V +++ + P T ++ C++GR+RD + + M E +V+A+ + N+LI
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 377 NAYSK-------------------------IGDLKSALKFKNKMLESGLKPDPFTYKALI 411
N + + +G+ K ++ M E +K D TY ++
Sbjct: 303 NGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVM 362
Query: 412 HGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC 471
+ + +E A ++ M+ AG P +YS + GY + L + + +
Sbjct: 363 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR- 421
Query: 472 LDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNV 531
+ ++ +I C ++ A ++F M G+S + + +L + Y + + A V
Sbjct: 422 PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 481
Query: 532 LEEM 535
L+ M
Sbjct: 482 LQMM 485
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 130/266 (48%), Gaps = 18/266 (6%)
Query: 147 QVFEQMRLYQ-LKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHA 205
+V E+M + + KP+ C +++ ++G + +R+ + V N+ ++N LI+
Sbjct: 245 EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 206 CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLD 265
+ D + ++E + + ++N + L + M + L++ M+ + D
Sbjct: 305 FVEVMD-------RDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTL---MKECNVKAD 354
Query: 266 IVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRE 323
+++Y++++ + G M +A ++F E+ A P+ Y+ L GY +A E +A ++ E
Sbjct: 355 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLE 414
Query: 324 --LMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
++E++ P V + +++ C +G + DA ++ N+M + V + T TL+ Y +
Sbjct: 415 TLIVESR---PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE 471
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTY 407
+ A + M G+KP+ T+
Sbjct: 472 VKQPWKAEEVLQMMRGCGVKPENSTF 497
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 92/177 (51%), Gaps = 3/177 (1%)
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
V ++ Y+ +++A S + +E+A Q+ EM + GV PD Y+ L Y + +A
Sbjct: 351 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 410
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGY 309
+ + + E ++V + ++I G+C G M +A R+F+++ +PN T+ TL+ GY
Sbjct: 411 ELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 469
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
+ + +A +V ++M G+ P +T+ + G ++NK +N + K ++
Sbjct: 470 LEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDIE 526
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 182/443 (41%), Gaps = 56/443 (12%)
Query: 136 YAKSRMTQDALQVF-EQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVL 194
Y + ++ AL VF E + L H+ T+L+ S K G + +++ + L + + L
Sbjct: 224 YCNTGKSERALSVFNEILSRGWLDEHIS--TILVVSFCKWGQVDKAFELIEMLEERDIRL 281
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
N Y LIH K +++A QL +M G+ DI Y+ LI CK ALS+
Sbjct: 282 NYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLY 341
Query: 255 DKMEREGINLD---------------------------------IVSYNSLIYGFCKEGR 281
+++R GI D ++ Y SL GF +
Sbjct: 342 LEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDL 401
Query: 282 MREATRMF------------SEI--------KDATPNHVTYTTLIDGYCKANELDQALKV 321
+ EA SEI K P+ + + +I+ KAN++D A+ +
Sbjct: 402 VHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTL 461
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+ GL PG YN+I+ +C++GR ++ KLL EM + V+ T N + ++
Sbjct: 462 LHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAE 521
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
D AL KM G +P L+ C+ A + L + GF +
Sbjct: 522 RCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVA 581
Query: 442 YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
+ +DG K + VD L L + + G C D Y LI+ LCK + A+ LF M
Sbjct: 582 STAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMV 641
Query: 502 GNGISGDSVIYTSLAYAYWKSGK 524
G+ Y S+ + K G+
Sbjct: 642 SKGLKPTVATYNSMIDGWCKEGE 664
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 129/262 (49%), Gaps = 6/262 (2%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
AL + ++MR Y +P + T L+ L ++G K + +G + ++ I
Sbjct: 528 ALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
K+ V+R +L ++ G PD+ Y+ LI CK EA + ++M +G+
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 265 DIVSYNSLIYGFCKEGRMREA----TRMFSEIKDATPNHVTYTTLIDGYCKANELDQALK 320
+ +YNS+I G+CKEG + RM+ + K+ P+ +TYT+LI G C + +A+
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKN--PDVITYTSLIHGLCASGRPSEAIF 705
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
M+ K YP T+ ++++ LC+ G +A EM EK+++ D+ +L++++
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFL 765
Query: 381 KIGDLKSALKFKNKMLESGLKP 402
++ + +M+ G P
Sbjct: 766 SSENINAGFGIFREMVHKGRFP 787
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 157/382 (41%), Gaps = 37/382 (9%)
Query: 159 PHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQL 218
P + +++++ L+K ++ + +VQ+G++ +YN +I K E + +L
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 219 LNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCK 278
L EM++ GV P FT N + ++ AL + KM G I L+ C+
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 279 EGRMREATRMFSEIK-DATPNH-VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVAT 336
GR +A + ++ + H V T IDG K +D+ L++ + A G P V
Sbjct: 557 NGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIA 616
Query: 337 YNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML 396
Y+ +++ LC+ R +A+ L NEM K
Sbjct: 617 YHVLIKALCKACRTMEADILFNEMVSK--------------------------------- 643
Query: 397 ESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
GLKP TY ++I G+CK E++ + M + P +Y+ ++ G C
Sbjct: 644 --GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPS 701
Query: 457 AILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLA 516
+ +E K + + ALI+ LCK A F ME + DS +Y SL
Sbjct: 702 EAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLV 761
Query: 517 YAYWKSGKTSVASNVLEEMAKR 538
++ S + + EM +
Sbjct: 762 SSFLSSENINAGFGIFREMVHK 783
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 2/210 (0%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
++LV ++ DA + + + H+ A T + L+K+ + ++ + +
Sbjct: 548 TFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICA 607
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
+G ++ Y+ LI A K+ A L NEM KG+ P + TYN++I +CK+G
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR 667
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLID 307
LS +M + N D+++Y SLI+G C GR EA ++E+ KD PN +T+ LI
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQ 727
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATY 337
G CK +AL ME K + P A Y
Sbjct: 728 GLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 155/354 (43%), Gaps = 26/354 (7%)
Query: 175 GTTNVVWKIHKRLVQDGV-VLNIYIYNCLIHACSKSRD--VERAKQLLNEMEEKGVVPDI 231
G + + R+ + G+ V N Y YNCL+ A SKS VE + L EM + G D
Sbjct: 155 GLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDK 214
Query: 232 FTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS- 290
FT ++ +YC G ALS+ +++ G LD L+ FCK G++ +A +
Sbjct: 215 FTLTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCKWGQVDKAFELIEM 273
Query: 291 -EIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGR 349
E +D N+ TY LI G+ K + +D+A ++ E M G+ +A Y+ ++ LC+
Sbjct: 274 LEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKD 333
Query: 350 IRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
+ A L E+ + D L+ ++S+ +L + ++ K YK+
Sbjct: 334 LEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDK--KSVMLLYKS 391
Query: 410 LIHGFCKMDELESAKELLFGML------------------DAGFTPSYCSYSWIVDGYCK 451
L GF + D + A + ++ + P S S +++ K
Sbjct: 392 LFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVK 451
Query: 452 KDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
+ VD + L + + GL +Y +I +CK + E + KL M+ G+
Sbjct: 452 ANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGV 505
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 146/305 (47%), Gaps = 20/305 (6%)
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK-------GMHYE 249
++++ LI +C S++++ A ++ ++ +G+ I T N LI+ ++ M+ E
Sbjct: 163 FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYRE 222
Query: 250 ALSIQDKMEREG------INLDIVSYNSLIYGFCKEGRMREATRMFSEIKD---ATPNHV 300
+ D E I + ++NS++ F +EG R++ E+++ +PN
Sbjct: 223 VFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY 282
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
+Y L++ YC + +A KV E M+ +G+ + YN+++ LC + + A +L +M
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE- 419
K ++ +T L+N Y K GD+ S L +M G + D T +AL+ G C +
Sbjct: 343 GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDG 402
Query: 420 ---LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
+E+A + + +A F PS Y +V C+ +D L + E + KG
Sbjct: 403 QRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQET 462
Query: 477 YRALI 481
YRA I
Sbjct: 463 YRAFI 467
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 194/439 (44%), Gaps = 29/439 (6%)
Query: 20 KGHWGNLLKVNNAPVLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWA 79
K W L + + + + ++ L L N P +S FF + +H
Sbjct: 55 KSRWSTLRSLQPSG-FTPSQFSEITLCLRNN---PHLSLRFFLFTRRYSLCSHDTHSCST 110
Query: 80 MIQILAKYKHFKTAQQMLD---KIAHRDFXXXXXXXXXXXRIHDDPEVNSQ--VLSWLVI 134
+I IL++ + A +++ ++A D I S V L+
Sbjct: 111 LIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIK 170
Query: 135 HYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ-DGVV 193
S+ A+ V ++R + + C L++ + + + +K+++ + D V
Sbjct: 171 SCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVS 230
Query: 194 L------------NIYIYNCLIHACSKSRDVERAKQLLNEMEEK-GVVPDIFTYNTLISL 240
+ N +N ++ + + + E +++ EMEE+ G P++++YN L+
Sbjct: 231 VDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEA 290
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPN 298
YC +G+ EA + ++M+ G+ DIV+YN++I G C + +A +F + +K
Sbjct: 291 YCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECT 350
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD---GRIRDANK 355
+TY L++GYCKA ++D L V M+ KG T +++ LC D R+ +A
Sbjct: 351 CLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAAD 410
Query: 356 LLNEMSEKKVQADNITC-NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
++ + + + + C L+ + G + AL + +M+ G KP TY+A I G+
Sbjct: 411 IVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGY 470
Query: 415 CKMDELESAKELLFGMLDA 433
+ + E++ L M ++
Sbjct: 471 GIVGDEETSALLAIEMAES 489
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 198/466 (42%), Gaps = 68/466 (14%)
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
+ L+ Y + R + A +VF++MR+ ++P+ +VL+ LK R
Sbjct: 199 TFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLK-----------MRD 247
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIF--------------- 232
V+ G L ++ + + S L++ M +G DIF
Sbjct: 248 VETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVE 307
Query: 233 -TYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE 291
Y +I C+ ++ A I M+ +G+ SYN++I+G CK+G A ++ E
Sbjct: 308 FAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE 367
Query: 292 IKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAK--------------GL----- 330
+ P+ TY L++ CK + +A V ELM K GL
Sbjct: 368 GSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDN 427
Query: 331 ----------------YPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA-DNITCN 373
P T N+++ LC+ GR+ DA K+L++M K A D +T N
Sbjct: 428 PTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLN 487
Query: 374 TLINAYSKIGDLKSALKFKNK-MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
T++ G + AL N+ M E+ +KP Y A+I G K+ + + A + FG L+
Sbjct: 488 TVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSV-FGQLE 546
Query: 433 -AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
A T +Y+ I+DG C + VD D+ + DA VY A ++ LC+ +
Sbjct: 547 KASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLS 606
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
A Y + +G + V Y ++ +SG A +LEEM K
Sbjct: 607 DACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRK 652
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 152/342 (44%), Gaps = 20/342 (5%)
Query: 208 KSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK-KGMHYEALSIQDKMEREGINLDI 266
KS DVE + + + V D + I C + EAL I D + G D
Sbjct: 31 KSDDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDS 90
Query: 267 VSYNSLIYGFCKEGRMREATRMF------SEIKDATPNHVTYTTLIDGYCKANELDQALK 320
++ +S+I+ C GR EA R F I D +V L+ Y ++ +
Sbjct: 91 LNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLL--YSRSPVSTLGVI 148
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
R + K P + YN ++ +LC R+ DA+KL+ +M + D +T TLI Y
Sbjct: 149 HRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYC 208
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL-----FGMLDAGF 435
+I +L+ A K ++M G++P+ T LI GF KM ++E+ ++L+ + +
Sbjct: 209 EIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDT 268
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV---YRALIRRLCKIEQIEC 492
+ +++ +VD C++ + I + + LC +V Y +I LC+ +
Sbjct: 269 SMKAAAFANLVDSMCREGYFNDIFEIAENM---SLCESVNVEFAYGHMIDSLCRYRRNHG 325
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
A ++ Y M+ G+ Y ++ + K G A +LEE
Sbjct: 326 AARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE 367
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 181/461 (39%), Gaps = 51/461 (11%)
Query: 159 PHLPACTVLLSSLLKDGTTNVVWKIHKRLV--QDGVVLNIYIYNCLIHACSKSRDVERAK 216
P C V+++ LL + + RL+ + V ++ YN L++ V A
Sbjct: 123 PDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAH 182
Query: 217 QLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGF 276
+L+ +M +G +PD+ T+ TLI YC+ A + D+M GI + ++ + LI GF
Sbjct: 183 KLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGF 242
Query: 277 CKEGRMREATRMFSEI-------KDATPNHVTYTTLIDGYCKANELDQALKVRE------ 323
K + ++ E+ D + + L+D C+ + ++ E
Sbjct: 243 LKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCE 302
Query: 324 -----------------------------LMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
+M++KGL P +YN+I+ LC+DG A
Sbjct: 303 SVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAY 362
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
+LL E SE + T L+ + K D A ML Y + G
Sbjct: 363 QLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGL 422
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
C MD +L ML P + + +++G CK VD + + D+ ++ C
Sbjct: 423 CVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPD 482
Query: 475 SVY--RALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVL 532
+V + L + E + L M N I V Y ++ +K K A +V
Sbjct: 483 AVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVF 542
Query: 533 EEMAKRRLIITAKIYSCFSVPDGHG-ENKV--SQMFWDHVV 570
++ K + + Y+ + DG NKV ++ FWD V+
Sbjct: 543 GQLEKASVTADSTTYAI--IIDGLCVTNKVDMAKKFWDDVI 581
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEM-EEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
Y N +I+ K V+ A ++L++M K PD T NT++ +G EAL + +
Sbjct: 448 YTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLN 507
Query: 256 K-MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKA 312
+ M I +V+YN++I G K + EA +F +++ A T + TY +IDG C
Sbjct: 508 RVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVT 567
Query: 313 NELDQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
N++D A K +++ G + Y + L+ LCQ G + DA L ++++ + +
Sbjct: 568 NKVDMAKKFWDDVIWPSGRHDAF-VYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVC 626
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
NT+I S+ G + A + +M ++G PD T++ L
Sbjct: 627 YNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 129/340 (37%), Gaps = 39/340 (11%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A Q+ E+ ++ P +L+ SL K+ T + + +++ IYN +
Sbjct: 361 AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLR 420
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI-QDKMEREGIN 263
+ +L M + PD +T NT+I+ CK G +A+ + D M +
Sbjct: 421 GLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCA 480
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPNHVTYTTLIDGYCKANELDQALK 320
D V+ N+++ G +GR EA + + + P V Y +I G K ++ D+A+
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS 540
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
V +E + TY I+ LC ++
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKV------------------------------ 570
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
A KF + ++ + D F Y A + G C+ L A L+ + D+G P+
Sbjct: 571 -----DMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVV 625
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
Y+ ++ + + +E G DA +R L
Sbjct: 626 CYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 185/402 (46%), Gaps = 26/402 (6%)
Query: 29 VNNAPV-LSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKY 87
+N A V LS I +VL +LS G ++ FKW E+ + H+ A+I+ L K
Sbjct: 85 LNEASVKLSPALIEEVLKKLSNAGV---LALSVFKWAENQKGFKHTTSNYNALIESLGKI 141
Query: 88 KHFK---------TAQQMLDK----IAHRDFXXXXXXXXXXXRIHDDPE----VNSQVLS 130
K FK A+++L K + R + H E + S +
Sbjct: 142 KQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFN 201
Query: 131 WLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQD 190
++ +KSR DA +VF++M+ + +P + + T+LL ++ V ++++ + +
Sbjct: 202 RMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDE 261
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA 250
G ++ Y +I+A K++ E A + NEME++ P + +LI+ + +A
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA 321
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTYTTLIDG 308
L ++ + G L+ +YN+L+ +C RM +A + E +K PN TY ++
Sbjct: 322 LEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHH 381
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQAD 368
+ +A +V + M + P V+TY ++R C R+ A K+ +EM K V
Sbjct: 382 LIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPG 438
Query: 369 NITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
++LI A L A ++ N+ML+ G++P + L
Sbjct: 439 MHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 171/380 (45%), Gaps = 12/380 (3%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQD---GVVLNIYIYNCLIHACSKSRDVERAKQLLNE 221
L+ SL K ++W LV D +L+ + + +++R V+ A ++
Sbjct: 132 NALIESLGKIKQFKLIWS----LVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHK 187
Query: 222 MEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGR 281
MEE G + +N ++ K +A + DKM+++ DI SY L+ G+ +E
Sbjct: 188 MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 247
Query: 282 MREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNS 339
+ + E+KD P+ V Y +I+ +CKA + ++A++ ME + P + S
Sbjct: 248 LLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 307
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
++ L + ++ DA + + T N L+ AY ++ A K ++M G
Sbjct: 308 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAIL 459
+ P+ TY ++H +M + A E+ M P+ +Y +V +C K+ +D +
Sbjct: 368 VGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAI 424
Query: 460 ALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAY 519
+ DE KG+ ++ +LI LC +++ A + F M GI +++ L
Sbjct: 425 KIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTL 484
Query: 520 WKSGKTSVASNVLEEMAKRR 539
G+ ++++ +M + R
Sbjct: 485 LDEGRKDKVTDLVVKMDRLR 504
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 143/379 (37%), Gaps = 66/379 (17%)
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
Q G YN LI + K + + L+++M+ K ++ T+ + Y +
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVK 179
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDG 308
EA+ KME G ++ +N ++ D
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRML---------------------------------DT 206
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQAD 368
K+ + A KV + M+ K P + +Y +L Q+ + +++ EM ++ + D
Sbjct: 207 LSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPD 266
Query: 369 NITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLF 428
+ +INA+ K + A++F N+M + KP P + +LI+G +L A E
Sbjct: 267 VVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFE 326
Query: 429 GMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA-------------- 474
+GF +Y+ +V YC ++ DE KG+ +A
Sbjct: 327 RSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQ 386
Query: 475 ------------------SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLA 516
S Y ++R C E+++ A K++ M+G G+ +++SL
Sbjct: 387 RSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 446
Query: 517 YAYWKSGKTSVASNVLEEM 535
A K A EM
Sbjct: 447 TALCHENKLDEACEYFNEM 465
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 175/389 (44%), Gaps = 21/389 (5%)
Query: 57 SFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXX 116
+F FF W + H + +M+ ILAK + F+T +L+++ +
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL----------- 226
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
+ + + + +A ++ + A+ +FE M+ Y+ K + LL SL +
Sbjct: 227 -------LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKL 279
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ +L ++ N+ Y L++ + R++ A ++ N+M ++G+ PDI +N
Sbjct: 280 GKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNV 338
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA- 295
++ + +A+ + M+ +G ++ SY +I FCK+ M A F ++ D+
Sbjct: 339 MLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 296 -TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
P+ YT LI G+ +LD ++ + M+ KG P TYN++++ + A
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHAT 458
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
++ N+M + +++ T N ++ +Y + + +M++ G+ PD +Y LI G
Sbjct: 459 RIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGL 518
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYS 443
+ A L MLD G Y+
Sbjct: 519 IGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 172/386 (44%), Gaps = 41/386 (10%)
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ G + YN ++ +K+R E +L EM KG++ + T+ + +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERK 246
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-TPNHVTYTTLID 307
+A+ I + M++ + + + N L+ + +EA +F ++K+ TPN +TYT L++
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 306
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
G+C+ L +A ++ M +GL P + +N +L L + + DA KL + M K
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
+ + +I + K +++A+++ + M++SGL+PD Y LI GF +L++ ELL
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 428 FGMLDAG-----------------------------------FTPSYCSYSWIVDGYCKK 452
M + G PS +++ I+ Y
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 453 DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
N + A+ +E + KG+C D + Y LIR L + A + M G+ + Y
Sbjct: 487 RNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDY 546
Query: 513 TSLAYAYWKSGKTSVASNVLEEMAKR 538
A + + G+ + EE+A+R
Sbjct: 547 NKFAADFHRGGQ----PEIFEELAQR 568
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 102/246 (41%), Gaps = 33/246 (13%)
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
+SR DA+++F M+ P++ + T+++ K + + +V G+ +
Sbjct: 345 RSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 404
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
+Y CLI + ++ +LL EM+EKG PD TYN LI L + M A I +KM
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKM 464
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQ 317
+ I P+ T+ ++ Y A +
Sbjct: 465 IQNEIE---------------------------------PSIHTFNMIMKSYFMARNYEM 491
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
V E M KG+ P +Y ++R L +G+ R+A + L EM +K ++ I N
Sbjct: 492 GRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAA 551
Query: 378 AYSKIG 383
+ + G
Sbjct: 552 DFHRGG 557
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 2/225 (0%)
Query: 326 EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDL 385
E +G TYNS++ L + + +L EM K + T + A++ +
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKER 245
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
K A+ M + K T L+ + +L ++LF L FTP+ +Y+ +
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVL 304
Query: 446 VDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
++G+C+ N+ + ++ + +GL D + ++ L + + A KLF+ M+ G
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 506 SGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
+ YT + + K A ++M L A +Y+C
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 188/435 (43%), Gaps = 24/435 (5%)
Query: 57 SFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXX 116
+F FF W + H+ + +M+ ILAK + F+T +L+++ +
Sbjct: 178 AFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL----------- 226
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
+ + + + +A ++ + A+ +FE M+ Y+ K + LL SL +
Sbjct: 227 -------LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKL 279
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ +L ++ N+ Y L++ + R++ A ++ N+M + G+ PDI +N
Sbjct: 280 GKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNV 338
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA- 295
++ + +A+ + M+ +G ++ SY +I FCK+ M A F ++ D+
Sbjct: 339 MLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 296 -TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
P+ YT LI G+ +LD ++ + M+ KG P TYN++++ +
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 458
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
++ N+M + +++ T N ++ +Y + + ++M++ G+ PD +Y LI G
Sbjct: 459 RIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 518
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
+ A L MLD G Y+ + + + L G A
Sbjct: 519 ISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAA 578
Query: 475 SVY---RALIRRLCK 486
++ + RR CK
Sbjct: 579 EIFARWAQMTRRRCK 593
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 168/376 (44%), Gaps = 41/376 (10%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
YN ++ +K+R E +L EM KG++ + T+ + + +A+ I + M+
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-TPNHVTYTTLIDGYCKANELDQ 317
+ + + + N L+ + +EA +F ++K+ TPN +TYT L++G+C+ L +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIE 316
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
A ++ M GL P + +N +L L + + DA KL + M K + + +I
Sbjct: 317 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIR 376
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG--- 434
+ K +++A+++ + M++SGL+PD Y LI GF +L++ ELL M + G
Sbjct: 377 DFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP 436
Query: 435 --------------------------------FTPSYCSYSWIVDGYCKKDNVDAILALP 462
PS +++ I+ Y N + A+
Sbjct: 437 DGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVW 496
Query: 463 DEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKS 522
DE + KG+C D + Y LIR L + A + M G+ + Y A + +
Sbjct: 497 DEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRG 556
Query: 523 GKTSVASNVLEEMAKR 538
G+ + EE+A+R
Sbjct: 557 GQ----PEIFEELAQR 568
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 2/225 (0%)
Query: 326 EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDL 385
E +G TYNS++ L + + +L EM K + T + A++ +
Sbjct: 187 ERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKER 245
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
K A+ M + K T L+ + +L ++LF L FTP+ +Y+ +
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVL 304
Query: 446 VDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
++G+C+ N+ + ++ + GL D + ++ L + + A KLF+ M+ G
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 364
Query: 506 SGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
+ YT + + K A ++M L A +Y+C
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 164/360 (45%), Gaps = 7/360 (1%)
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEME--EKGVVPDIFTYNTLISLYCKKGM 246
Q G V + + YN ++ K R+ + +L+NEM E+ + + T + ++ K G
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 218
Query: 247 HYEALSIQDKMERE-GINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT-PNHVTYTT 304
+ +A+ +ME+ G+ D ++ NSL+ KE + A +F ++ D P+ T+
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNI 278
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
LI G+CKA + D A + +LM+ P V TY S + C++G R N++L EM E
Sbjct: 279 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
+ +T ++++ K + AL KM E G PD Y +LIH K + A
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAA 398
Query: 425 ELLFGMLDAGFTPSYCSYSWIVDG---YCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
E+ M + G Y+ ++ + + + +L ++ + + Y L+
Sbjct: 399 EIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Query: 482 RRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
+ C ++++ L +HM N +S D Y L SGK A EE ++ ++
Sbjct: 459 KMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMV 518
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 200/468 (42%), Gaps = 58/468 (12%)
Query: 34 VLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTA 93
V++ + + QVL + S NG+ + + FF W S Y HS AM+ +L K ++F
Sbjct: 129 VVTESLVLQVLRRFS-NGWNQA--YGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLM 185
Query: 94 QQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMR 153
++++++ + + V +S ++ AKS A+ F +M
Sbjct: 186 WELVNEMNKNE---------------ESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEME 230
Query: 154 LYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVE 213
K + GV + N L+ A K +E
Sbjct: 231 ----KSY------------------------------GVKTDTIAMNSLMDALVKENSIE 256
Query: 214 RAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLI 273
A ++ ++ + + PD T+N LI +CK +A ++ D M+ D+V+Y S +
Sbjct: 257 HAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFV 315
Query: 274 YGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLY 331
+CKEG R M E+++ PN VTYT ++ K+ ++ +AL V E M+ G
Sbjct: 316 EAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCV 375
Query: 332 PGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
P Y+S++ L + GR +DA ++ +M+ + V+ D + NT+I+A + AL+
Sbjct: 376 PDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRL 435
Query: 392 KNKMLES---GLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
+M + P+ TY L+ C +++ LL M+ + +Y ++ G
Sbjct: 436 LKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRG 495
Query: 449 YCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
C V+ +E + KG+ S + L+ L K E K+
Sbjct: 496 LCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKI 543
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 133/282 (47%), Gaps = 5/282 (1%)
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
++ D + +++ + L+ + K+R DA + + M++ + P + T + + K+G
Sbjct: 264 KLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
V ++ + + ++G N+ Y ++H+ KS+ V A + +M+E G VPD Y++
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA- 295
LI + K G +A I + M +G+ D++ YN++I R A R+ ++D
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 296 ----TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIR 351
+PN TY L+ C ++ + M + V+TY ++R LC G++
Sbjct: 444 GESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVE 503
Query: 352 DANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
+A E K + + TC L++ K ++ LK ++
Sbjct: 504 EACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQS 545
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 176/389 (45%), Gaps = 30/389 (7%)
Query: 57 SFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXX 116
+F FF W Y S++ +MI IL K + F TA ++D++ R F
Sbjct: 144 AFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSL------- 194
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK--- 173
VNSQ L ++ Y A+ F + ++L+ + LLS+L +
Sbjct: 195 -------VNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKN 247
Query: 174 -DGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIF 232
++++ + D NI + N + R+ ER + EM GV D+
Sbjct: 248 VSDAGHLIFCNKDKYPFDAKSFNI-VLNGWCNVIGSPREAER---VWMEMGNVGVKHDVV 303
Query: 233 TYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREA---TRMF 289
+Y+++IS Y K G + L + D+M++E I D YN++++ K + EA +
Sbjct: 304 SYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTM 363
Query: 290 SEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGR 349
E K PN VTY +LI CKA + ++A +V + M KGL+P + TY++ +R L + G
Sbjct: 364 EEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG- 421
Query: 350 IRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
+ +LL +M + + T LI + D + L ++M E + PD +Y
Sbjct: 422 -EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIV 480
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPS 438
+IHG ++E A M D G P+
Sbjct: 481 MIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 129/266 (48%), Gaps = 11/266 (4%)
Query: 264 LDIVSYNSLIYGFCKE-GRMREATRMFSEIKDATPNH--VTYTTLIDGYCKANELDQALK 320
D S+N ++ G+C G REA R++ E+ + H V+Y+++I Y K L++ LK
Sbjct: 264 FDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 323
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK-VQADNITCNTLINAY 379
+ + M+ + + P YN+++ L + + +A L+ M E+K ++ + +T N+LI
Sbjct: 324 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 383
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK-MDELESAKELLFGMLDAGFTPS 438
K + A + ++MLE GL P TY H F + + E ELL M G P+
Sbjct: 384 CKARKTEEAKQVFDEMLEKGLFPTIRTY----HAFMRILRTGEEVFELLAKMRKMGCEPT 439
Query: 439 YCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFY 498
+Y ++ C+ + D +L L DE K + D S Y +I L +IE A +
Sbjct: 440 VETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYK 499
Query: 499 HMEGNGISGDSVIYTSLAYAYWKSGK 524
M+ G+ + + + W SGK
Sbjct: 500 EMKDKGMRPNENVEDMI--QSWFSGK 523
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 173/413 (41%), Gaps = 23/413 (5%)
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL---ISLYCKKG 245
Q G V ++ Y+ +I K R + A L++EM + P + TL I YC
Sbjct: 154 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVH 211
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP-NHVTYTT 304
+A++ +R + + I + SL+ C+ + +A + KD P + ++
Sbjct: 212 DVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNI 271
Query: 305 LIDGYCKA-NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
+++G+C +A +V M G+ V +Y+S++ + G + KL + M ++
Sbjct: 272 VLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKE 331
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLES-GLKPDPFTYKALIHGFCKMDELES 422
++ D N +++A +K + A M E G++P+ TY +LI CK + E
Sbjct: 332 CIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEE 391
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
AK++ ML+ G P+ +Y + + V +LA + G Y LIR
Sbjct: 392 AKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLA---KMRKMGCEPTVETYIMLIR 448
Query: 483 RLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL-- 540
+LC+ + L+ M+ + D Y + + + +GK A +EM + +
Sbjct: 449 KLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 508
Query: 541 ----------IITAKIYSCFSVPDGHGENKVSQMFWDHVVERGLMSRNTMRKI 583
+ K Y+ + D GE + E+ + + +RK+
Sbjct: 509 NENVEDMIQSWFSGKQYAEQRITDSKGEVNKGAIVKKSEREKNFLQQPEVRKV 561
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 120/298 (40%), Gaps = 41/298 (13%)
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTL---IDGYCKANE 314
+++G + Y+S+I K + A + E++ +P+ V TL I YC ++
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHD 212
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+ +A+ + L G+ + S+L LC+ + DA L I CN
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHL-------------IFCN- 258
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK-MDELESAKELLFGMLDA 433
K F D ++ +++G+C + A+ + M +
Sbjct: 259 -----------KDKYPF-----------DAKSFNIVLNGWCNVIGSPREAERVWMEMGNV 296
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
G SYS ++ Y K +++ +L L D + + D VY A++ L K + A
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 494 EKLFYHMEGN-GISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
L ME GI + V Y SL K+ KT A V +EM ++ L T + Y F
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAF 414
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 187/435 (42%), Gaps = 24/435 (5%)
Query: 57 SFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXX 116
+F FF W + H + +M+ ILAK + F+T +L+++ +
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL----------- 225
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
+ + + + +A ++ + A+ +FE M+ Y+ K + LL SL +
Sbjct: 226 -------LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKL 278
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ +L ++ N+ Y L++ + R++ A ++ N+M + G+ PDI +N
Sbjct: 279 GKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNV 337
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA- 295
++ + +A+ + M+ +G ++ SY +I FCK+ M A F ++ D+
Sbjct: 338 MLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 397
Query: 296 -TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
P+ YT LI G+ +LD ++ + M+ KG P TYN++++ +
Sbjct: 398 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 457
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
++ N+M + +++ T N ++ +Y + + ++M++ G+ PD +Y LI G
Sbjct: 458 RIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 517
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
+ A L MLD G Y+ + + + L G A
Sbjct: 518 ISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAA 577
Query: 475 SVY---RALIRRLCK 486
++ + RR CK
Sbjct: 578 EIFARWAQMTRRRCK 592
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 171/386 (44%), Gaps = 41/386 (10%)
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ G + YN ++ +K+R E +L EM KG++ + T+ + +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERK 245
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-TPNHVTYTTLID 307
+A+ I + M++ + + + N L+ + +EA +F ++K+ TPN +TYT L++
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 305
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
G+C+ L +A ++ M GL P + +N +L L + + DA KL + M K
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 365
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
+ + +I + K +++A+++ + M++SGL+PD Y LI GF +L++ ELL
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 428 FGMLDAG-----------------------------------FTPSYCSYSWIVDGYCKK 452
M + G PS +++ I+ Y
Sbjct: 426 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 485
Query: 453 DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
N + A+ DE + KG+C D + Y LIR L + A + M G+ + Y
Sbjct: 486 RNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDY 545
Query: 513 TSLAYAYWKSGKTSVASNVLEEMAKR 538
A + + G+ + EE+A+R
Sbjct: 546 NKFAADFHRGGQ----PEIFEELAQR 567
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 2/225 (0%)
Query: 326 EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDL 385
E +G TYNS++ L + + +L EM K + T + A++ +
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKER 244
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
K A+ M + K T L+ + +L ++LF L FTP+ +Y+ +
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVL 303
Query: 446 VDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
++G+C+ N+ + ++ + GL D + ++ L + + A KLF+ M+ G
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 363
Query: 506 SGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
+ YT + + K A ++M L A +Y+C
Sbjct: 364 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 189/420 (45%), Gaps = 62/420 (14%)
Query: 57 SFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXX 116
+ FF WVE + H+ + +I IL KY F+ + +++++
Sbjct: 64 ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRM---------------- 107
Query: 117 RIHDDPEVNSQVLSWLVI-HYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
I + V + V +V Y + + Q+A+ ++++ + L+ D
Sbjct: 108 -IGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR---------------DE 151
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLL---NEMEEKGVVPDIF 232
T+ YN L+ A + + V A++L N + V +
Sbjct: 152 TS--------------------FYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTK 190
Query: 233 TYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI 292
+N ++ + K G + KM+ EG+ D+ SY+ + CK G+ +A +++ E+
Sbjct: 191 IHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEM 250
Query: 293 KDATP--NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
K + V Y T+I + ++ ++V M +G P VAT+N+I++ LC+DGR+
Sbjct: 251 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRM 310
Query: 351 RDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
RDA ++L+EM ++ Q D+IT L +S++ L +M+ SG++P TY L
Sbjct: 311 RDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVML 367
Query: 411 IHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
+ F + L+ + M ++G TP +Y+ ++D +K +D +E + +GL
Sbjct: 368 MRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 96/225 (42%), Gaps = 4/225 (1%)
Query: 294 DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
++ PNHVT+ + Y A+ + +A+ + ++ L + YN ++ LC+ + +A
Sbjct: 112 ESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEA 170
Query: 354 NKLL---NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
+L N + ++ N ++ +SK+G ++ KM G+ D F+Y
Sbjct: 171 EELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIY 230
Query: 411 IHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
+ CK + A +L M +Y+ ++ V+ + + E +G
Sbjct: 231 MDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGC 290
Query: 471 CLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSL 515
+ + + +I+ LC+ ++ A ++ M G DS+ Y L
Sbjct: 291 EPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL 335
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 151/321 (47%), Gaps = 12/321 (3%)
Query: 157 LKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAK 216
L P + +L+ L+ + +I + + G V++ +Y+ L+ C K+ D +
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 217 QLLNEMEEK--GVVPDIFTYNTLISLYCKKGMHYEALSIQDKM--EREGINLDIVSYNSL 272
+L E++EK G V D Y L+ Y K M EA+ ++ E + + ++YN +
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 273 IYGFCKEGRMREATRMFSEIKDA--TPNHV-----TYTTLIDGYCKANELDQALKVRELM 325
+ + G+ EA ++F +K P H+ T+ +++GYC + ++A++V M
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 326 EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDL 385
P ++N+++ +LC + + +A KL EM EK V+ D T L++ K G +
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKI 436
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
+ M+ES L+P+ Y L K +L+ AK F M+ + +Y +I
Sbjct: 437 DEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKS-FFDMMVSKLKMDDEAYKFI 495
Query: 446 VDGYCKKDNVDAILALPDEFL 466
+ + +D +L + DE L
Sbjct: 496 MRALSEAGRLDEMLKIVDEML 516
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 159/387 (41%), Gaps = 48/387 (12%)
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY--CKKG----MHY- 248
I+ N ++ A + QL + + G+ P+I TYN + Y +K HY
Sbjct: 130 IFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYK 189
Query: 249 -----------------------------EALSIQDKMEREGINLDIVSYNSLIYGFCKE 279
+A+ I++ M +G +D V Y+ L+ G K
Sbjct: 190 LFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKN 249
Query: 280 GRMREATRMFSEIKDA----TPNHVTYTTLIDGYCKANELDQALKVRE--LMEAKGLYPG 333
+++ E+K+ + V Y L+ GY +A++ E + E +
Sbjct: 250 SDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMS 309
Query: 334 VATYNSILRKLCQDGRIRDANKLLN----EMSEKKVQADNI-TCNTLINAYSKIGDLKSA 388
YN +L L ++G+ +A KL + E + + A N+ T N ++N Y G + A
Sbjct: 310 AMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEA 369
Query: 389 LKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
++ +M + PD ++ L++ C + L A++L M + P +Y ++D
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDT 429
Query: 449 YCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGD 508
K+ +D A + L + +VY L +L K +++ A K F+ M + + D
Sbjct: 430 CFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA-KSFFDMMVSKLKMD 488
Query: 509 SVIYTSLAYAYWKSGKTSVASNVLEEM 535
Y + A ++G+ +++EM
Sbjct: 489 DEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 137/332 (41%), Gaps = 12/332 (3%)
Query: 229 PDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFC---KEGRMREA 285
P IFT NT+++ ++ + L + + + GI +I++YN + + K E
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 286 TRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
++F + P+ T+ L+ G + L++A++++E M KG Y+ ++
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 346 QDGRIRDANKLLNEMSEK--KVQADNITCNTLINAYSKIGDLKSALK-FKNKMLE-SGLK 401
++ KL E+ EK D + L+ Y K A++ ++ + E S ++
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC-----SYSWIVDGYCKKDNVD 456
Y ++ + + + A +L + P + +++ +V+GYC +
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFE 367
Query: 457 AILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLA 516
+ + + D + L+ +LC E + AEKL+ ME + D Y L
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Query: 517 YAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
+K GK + + M + L +Y+
Sbjct: 428 DTCFKEGKIDEGAAYYKTMVESNLRPNLAVYN 459
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
Query: 119 HDDPE---VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
H+ P VN + +V Y ++A++VF QM ++ P + L++ L +
Sbjct: 340 HNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNE 399
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
K++ + + V + Y Y L+ C K ++ M E + P++ YN
Sbjct: 400 LLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYN 459
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD 294
L K G +A S D M + + +D +Y ++ + GR+ E ++ E+ D
Sbjct: 460 RLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLD 517
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 145/291 (49%), Gaps = 7/291 (2%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N+ V + L+ Y KS ++ +F +MR LKP +L+ + + ++V +
Sbjct: 378 NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLL 437
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDV-ERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
+ + G+ N+ Y CLI A +++ + + A M++ G+ P +Y LI Y
Sbjct: 438 REMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSV 497
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEG---RMREATR-MFSEIKDATPNH 299
G H +A + ++M +EGI + +Y S++ F + G ++ E + M E T
Sbjct: 498 SGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGT--R 555
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
+TY TL+DG+ K +A V GL P V TYN ++ + G+ +LL E
Sbjct: 556 ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKE 615
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
M+ ++ D+IT +T+I A+ ++ D K A + M++SG PDP +Y+ L
Sbjct: 616 MAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 163/367 (44%), Gaps = 6/367 (1%)
Query: 137 AKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG-TTNVVWKIHKRLVQDGVVLN 195
+ S+ DA +V+E M + P C +L+++L K G + VW+I +++ + GV +
Sbjct: 284 SASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWS 343
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
++ L+ + E A + EME+KG+ + YNTL+ Y K E +
Sbjct: 344 QDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFT 403
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKAN 313
+M +G+ +YN L+ + + + + E++D PN +YT LI Y +
Sbjct: 404 EMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTK 463
Query: 314 EL-DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
++ D A M+ GL P +Y +++ G A EM ++ ++ T
Sbjct: 464 KMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETY 523
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
++++A+ + GD ++ ML +K TY L+ GF K A++++
Sbjct: 524 TSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSK 583
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
G PS +Y+ +++ Y + + L E + L D+ Y +I ++ +
Sbjct: 584 MGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKR 643
Query: 493 AEKLFYH 499
A FYH
Sbjct: 644 A--FFYH 648
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 181/424 (42%), Gaps = 9/424 (2%)
Query: 133 VIHYAKSRMTQDALQVFEQMRLYQLKPHLP-ACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
++ +S + L +E M L + P AC+VL + L ++ + + + L
Sbjct: 209 LVMMGESGFVKSCLYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKE 268
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY-EA 250
++ +YN I S S+ + A ++ M++ V PD T LI+ K G E
Sbjct: 269 EFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEV 328
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDG 308
I +KM +G+ + L+ FC EG EA + +E+ K N + Y TL+D
Sbjct: 329 WEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDA 388
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQAD 368
Y K+N +++ + M KGL P ATYN ++ + + LL EM + ++ +
Sbjct: 389 YNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 369 NITCNTLINAYS---KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ LI+AY K+ D+ + + K + GLKP +Y ALIH + E A
Sbjct: 449 VKSYTCLISAYGRTKKMSDMAADAFLRMKKV--GLKPSSHSYTALIHAYSVSGWHEKAYA 506
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
M G PS +Y+ ++D + + + ++ + L + + Y L+
Sbjct: 507 SFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFA 566
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAK 545
K A + G+ + Y L AY + G+ + +L+EMA L +
Sbjct: 567 KQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSI 626
Query: 546 IYSC 549
YS
Sbjct: 627 TYST 630
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 83/235 (35%), Gaps = 37/235 (15%)
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG-DLKSALKFK 392
V YN+ + L R DA ++ M + V DN+TC LI K G K +
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIF 332
Query: 393 NKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKK 452
KM E G+K + L+ FC D G
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFC----------------DEGLK---------------- 360
Query: 453 DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
+ L + E KG+ + VY L+ K IE E LF M G+ + Y
Sbjct: 361 ---EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATY 417
Query: 513 TSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMFWD 567
L AY + + + +L EM L K Y+C G + K+S M D
Sbjct: 418 NILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTK-KMSDMAAD 471
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 202/478 (42%), Gaps = 68/478 (14%)
Query: 35 LSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILA----KYKHF 90
L++ + ++L +L Y +F FF W HY+H MI IL+ K K F
Sbjct: 123 LTTPVVCKILQRLQ---YEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQF 179
Query: 91 KTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFE 150
+ MLD + ++ V VL ++ Y + +T +Q F
Sbjct: 180 RIVIDMLDYMKR----------------NNKTVVLVDVLLEILRKYCERYLTH--VQKFA 221
Query: 151 QMRLYQLK--PHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSK 208
+ + ++K P + A +LL +L K G + +R+ + V + +N L +
Sbjct: 222 KRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCR 280
Query: 209 SRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVS 268
RD ++A +LL EM E G P+ FTY I +C+ GM EA + D M +G + +
Sbjct: 281 VRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT 340
Query: 269 YNS---LIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRE 323
+ +I K + E + + P+ TY +I+G C A ++D+A K +
Sbjct: 341 AKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLD 400
Query: 324 LMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
M KG P + TYN LR LC++ + +A KL M E + T N LI+ + ++
Sbjct: 401 EMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMD 460
Query: 384 DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYS 443
D A +M + D TY A+I+G + + AKE F
Sbjct: 461 DPDGAFNTWTEMDKRDCVQDVETYCAMING---LFDCHRAKEACF--------------- 502
Query: 444 WIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
L +E ++KGL L V+ + + RL ++ ++ K+ HM+
Sbjct: 503 -----------------LLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMK 543
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 146/344 (42%), Gaps = 12/344 (3%)
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD-ATPNH 299
YC++ + + + K R +I ++N L+ CK G ++E + ++ P+
Sbjct: 209 YCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDA 268
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
T+ L G+C+ + +A+K+ E M G P TY + + CQ G + +A L +
Sbjct: 269 NTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDF 328
Query: 360 MSEKKVQADNITCNT---LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
M K T T +I A +K + + +M+ +G PD TYK +I G C
Sbjct: 329 MITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCM 388
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
++++ A + L M + G+ P +Y+ + C+ D L L +
Sbjct: 389 AEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQT 448
Query: 477 YRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
Y LI +++ + A + M+ D Y ++ + + A +LEE+
Sbjct: 449 YNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVV 508
Query: 537 KRRLIITAKIYSCF-----SVPDGHGENKVSQ---MFWDHVVER 572
+ L + +++ F V + +KVS+ F++H + R
Sbjct: 509 NKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMAR 552
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 134/314 (42%), Gaps = 6/314 (1%)
Query: 229 PDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRM 288
P+I +N L+ CK G+ E ++ +M R + D ++N L +G+C+ ++A ++
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 289 FSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLY---PGVATYNSILRK 343
E+ +A P + TY ID +C+A +D+A + + M KG P T+ ++
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 344 LCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD 403
L ++ + + +L+ M D T +I + A KF ++M G PD
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 404 PFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPD 463
TY + C+ + + A +L M+++ PS +Y+ ++ + + D+ D
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 470
Query: 464 EFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
E + D Y A+I L + + A L + G+ ++ S + G
Sbjct: 471 EMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVG 530
Query: 524 KTSVASNVLEEMAK 537
V E M K
Sbjct: 531 NLKAIHKVSEHMKK 544
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 42/283 (14%)
Query: 332 PGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
P + +N +L LC+ G +++ LL M + V+ D T N L + ++ D K A+K
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 392 KNKMLESGLKPDPFTYKALIHGFC------------------------------------ 415
+M+E+G KP+ FTY A I FC
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 416 --KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLD 473
K D+ E EL+ M+ G P +Y +++G C + VD DE +KG D
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 474 ASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLE 533
Y +R LC+ + + A KL+ M + + Y L +++ A N
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 470
Query: 534 EMAKRRLIITAKIYSCF--SVPDGHGENKVSQMFWDHVVERGL 574
EM KR + + Y + D H K + + VV +GL
Sbjct: 471 EMDKRDCVQDVETYCAMINGLFDCH-RAKEACFLLEEVVNKGL 512
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 185/396 (46%), Gaps = 38/396 (9%)
Query: 151 QMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSR 210
Q+ Y L+ L + + +SL+ + N ++ +++ N+ +N ++ + +K
Sbjct: 110 QIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLG 169
Query: 211 DVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYN 270
V+ A LL+EME G+ PDI T+N+L+S Y KG+ +A+++ +M+ G+ S +
Sbjct: 170 YVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSIS 229
Query: 271 SLIYGFCKEGRMREATRMFSEIKDATPNHVTY--TTLIDGYCKANELDQALKVRELMEAK 328
SL+ + G ++ + I + Y TTLID Y K L A V ++M+AK
Sbjct: 230 SLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK 289
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSA 388
+ +NS++ L ++DA L+ M ++ ++ D IT N+L + Y+ +G + A
Sbjct: 290 ----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKA 345
Query: 389 LKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI--- 445
L KM E G+ P+ ++ A+ G K +A ++ M + G P+ + S +
Sbjct: 346 LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405
Query: 446 ------------VDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
V G+C L K L DA V AL+ K ++ A
Sbjct: 406 LGCLSLLHSGKEVHGFC---------------LRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVAS 529
++F+ ++ ++ + + + YA + G+ +A+
Sbjct: 451 IEIFWGIKNKSLASWNCML--MGYAMFGRGEEGIAA 484
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 167/361 (46%), Gaps = 13/361 (3%)
Query: 130 SW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
SW ++ Y K DA+ + ++M + LKP + LLS G + + KR+
Sbjct: 157 SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
G+ + + L+ A ++ ++ K + + + D++ TLI +Y K G
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF--SEIKDATPNHVTYTTL 305
A + D M+ + +IV++NSL+ G +++A + E + P+ +T+ +L
Sbjct: 277 PYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
GY + ++AL V M+ KG+ P V ++ +I ++G R+A K+ +M E+ V
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ T +TL+ + L S + L L D + AL+ + K +L+SA E
Sbjct: 393 GPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIE 452
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+ +G+ + S S++ ++ GY + +A L G+ DA + +++ +C
Sbjct: 453 IFWGIKN----KSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL-SVC 507
Query: 486 K 486
K
Sbjct: 508 K 508
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 147/340 (43%), Gaps = 41/340 (12%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
+N ++ +S + E+A +L EM+ G T L+ + K E I +
Sbjct: 57 WNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVL 116
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQA 318
R G+ ++ NSLI + + G++ + ++F+ +KD N ++ +++ Y K +D A
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR--NLSSWNSILSSYTKLGYVDDA 174
Query: 319 LKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
+ + + ME GL P + T+NS+L G +DA +L M ++ + ++L+ A
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 379 YSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPS 438
++ G LK +L + L D + LI + K L A+ ++F M+DA
Sbjct: 235 VAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYAR-MVFDMMDA----- 288
Query: 439 YCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFY 498
N+ A + +L+ L ++ AE L
Sbjct: 289 --------------KNIVA-------------------WNSLVSGLSYACLLKDAEALMI 315
Query: 499 HMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
ME GI D++ + SLA Y GK A +V+ +M ++
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK 355
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 157/392 (40%), Gaps = 106/392 (27%)
Query: 128 VLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK 185
+++W L+ YA +++DA+ V ++M++ LKP + + LL ++ + G + IH
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHG 249
Query: 186 RLVQDGVVLNIYI-------------------------------YNCLIHACSKSRDVER 214
++++ + ++Y+ +N L+ S + ++
Sbjct: 250 YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKD 309
Query: 215 AKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIY 274
A+ L+ ME++G+ PD T+N+L S Y G +AL + KM+ +G+ ++VS+ ++
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369
Query: 275 GFCKEGRMREATRMFSEIKD--ATPNHVTYTT---------------------------- 304
G K G R A ++F ++++ PN T +T
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429
Query: 305 -------LIDGYCKANELDQALKVR-------------------------------ELME 326
L+D Y K+ +L A+++ +M
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 327 AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT-CNTLINAYSKIGDL 385
G+ P T+ S+L G +++ K + M + I C+ +++ + G L
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
A F M LKPD + A + CK+
Sbjct: 550 DEAWDFIQTM---SLKPDATIWGAFLSS-CKI 577
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 174/392 (44%), Gaps = 24/392 (6%)
Query: 159 PHLPACTVLLSSLL----KDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVER 214
P P T ++L+ K G N + +++ GV ++ +N +IH C +
Sbjct: 299 PRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSE 358
Query: 215 AKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIY 274
A+ LL +MEEKG+ PD TYN L+SL+ G AL K+ + G+ D V++ ++++
Sbjct: 359 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH 418
Query: 275 GFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP-- 332
C+ +M +E++ + ID + + + +++AK L+
Sbjct: 419 ILCQR-------KMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF 471
Query: 333 ------GVATYNSILRKLCQDGRIRDANKLL---NEMSEKKVQADNITCNTLINAYSKIG 383
T +++ + G +A + MS ++ D + N +I AY K
Sbjct: 472 QLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQR--NDVLEYNVMIKAYGKAK 529
Query: 384 DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYS 443
+ AL M G PD TY +L +D ++ A+ +L MLD+G P +Y+
Sbjct: 530 LHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYA 589
Query: 444 WIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGN 503
++ Y + + + L + G+ + VY +LI + +E A + F ME +
Sbjct: 590 AMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEH 649
Query: 504 GISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
G+ + ++ TSL AY K G A V ++M
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 178/442 (40%), Gaps = 23/442 (5%)
Query: 80 MIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSW-------- 131
MI + H A+ +L K+ + +H D L +
Sbjct: 346 MIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVG 405
Query: 132 ----LVIHYA------KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
V H A + +M + V +M ++ + V++ + +G
Sbjct: 406 LFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAK 465
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+ +R D V+ + + + K VE + G D+ YN +I Y
Sbjct: 466 ALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAY 525
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNH 299
K +H +ALS+ M+ +G D +YNSL + EA R+ +E+ D+ P
Sbjct: 526 GKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGC 585
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
TY +I Y + L A+ + E ME G+ P Y S++ + G + +A +
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRM 645
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
M E VQ+++I +LI AYSK+G L+ A + +KM +S PD +++ C
Sbjct: 646 MEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML-SLCADLG 704
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
+ S E +F L T S++ ++ Y +D + + +E GL D + +
Sbjct: 705 IVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQ 764
Query: 480 LIRRLCKIEQI-ECAEKLFYHM 500
++ Q+ EC E LF+ M
Sbjct: 765 VMACYAADGQLSECCE-LFHEM 785
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 14/339 (4%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N V L+ +A+S M ++A+Q F M + ++ + T L+ + K G +++
Sbjct: 619 NEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVY 678
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
++ ++ N ++ C+ V A+ + N + EKG D+ ++ T++ LY
Sbjct: 679 DKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGM 737
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPNHVT 301
GM EA+ + ++M G+ D S+N ++ + +G++ E +F E+ + + T
Sbjct: 738 GMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGT 797
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
+ TL K +A V +L A +AT G A + E++
Sbjct: 798 FKTLFTLLKKGGVPSEA--VSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELT 855
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
++ ++ N +I YS GD+ ALK +M E GL+PD T L+ + K +E
Sbjct: 856 SGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVE 915
Query: 422 SAK----ELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
K L FG L+ PS + + D Y + D
Sbjct: 916 GVKRVHSRLTFGELE----PSQSLFKAVRDAYVSANRQD 950
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 164/435 (37%), Gaps = 92/435 (21%)
Query: 193 VLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
V N+ YN ++ A ++ + + EM GV+P TY L+ +Y K G+ EAL
Sbjct: 142 VPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALL 201
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRM------------------------ 288
M + D V+ +++ F G A R
Sbjct: 202 WIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGS 261
Query: 289 -----------------------------FSEIKDATPNH----VTYTTLIDGYCKANEL 315
F+ D++P T+ TLID Y KA L
Sbjct: 262 AQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRL 321
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
+ A + M G+ T+N+++ G + +A LL +M EK + D T N L
Sbjct: 322 NDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNIL 381
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM----- 430
++ ++ GD+++AL++ K+ + GL PD T++A++H C+ + + ++ M
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSI 441
Query: 431 -LDAGFTPS----YCSYSWIVDGYC--KKDNVDAIL------ALPDEFLSKGLCLDASV- 476
+D P Y + +V ++ +D +L A+ D + KGL ++A
Sbjct: 442 RIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETV 501
Query: 477 ----------------YRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYW 520
Y +I+ K + E A LF M+ G D Y SL
Sbjct: 502 FYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLA 561
Query: 521 KSGKTSVASNVLEEM 535
A +L EM
Sbjct: 562 GVDLVDEAQRILAEM 576
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 122/227 (53%), Gaps = 6/227 (2%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEK-GVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
+N L+ A S+ ++ A + E+ EK G+ PD+ TYNT+I C+KG + LSI +++
Sbjct: 160 FNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEEL 219
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVTYTTLIDGYCKANEL 315
E+ G D++S+N+L+ F + E R++ + K+ +PN +Y + + G + +
Sbjct: 220 EKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKF 279
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
AL + ++M+ +G+ P V TYN+++ D + + K NEM EK + D +T L
Sbjct: 280 TDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCML 339
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH---GFCKMDE 419
I K GDL A++ + ++ L P YK ++ G K+DE
Sbjct: 340 IPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDE 386
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA---T 296
LY GM A + D+M + S+N+L+ + ++ EA + F E+ + T
Sbjct: 131 LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGIT 190
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P+ VTY T+I C+ +D L + E +E G P + ++N++L + + + +++
Sbjct: 191 PDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
+ M K + + + N+ + ++ AL + M G+ PD TY ALI +
Sbjct: 251 WDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRV 310
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
+ LE + M + G TP +Y ++ CKK ++D + + +E + L ++
Sbjct: 311 DNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM 370
Query: 477 YRALIRRLCKIEQIECAEKL 496
Y+ ++ RL +I+ A +L
Sbjct: 371 YKPVVERLMGAGKIDEATQL 390
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 143/300 (47%), Gaps = 21/300 (7%)
Query: 79 AMIQILAKYKHFKTAQQML------DKIAHRDFXXX-------XXXXXXXXRIHDD-PEV 124
A I+ L + K F T ++L D I DF ++ D+ PE+
Sbjct: 92 AFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPEL 151
Query: 125 NSQ----VLSWLVIHYAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNV 179
N + + L+ Y S+ +A++ F+++ + P L ++ +L + G+ +
Sbjct: 152 NCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDD 211
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
+ I + L ++G ++ +N L+ + ++ + M+ K + P+I +YN+ +
Sbjct: 212 ILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVR 271
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TP 297
+ +AL++ D M+ EGI+ D+ +YN+LI + + + E + ++E+K+ TP
Sbjct: 272 GLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTP 331
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
+ VTY LI CK +LD+A++V E L Y ++ +L G+I +A +L+
Sbjct: 332 DTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 116/280 (41%), Gaps = 17/280 (6%)
Query: 281 RMREATRM------------FSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAK 328
R+REA + F +IK + + V L+ GY E A K+ + M
Sbjct: 96 RLREAKKFSTIDEVLQYQKKFDDIK--SEDFVIRIMLLYGYSGMAE--HAHKLFDEMPEL 151
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK-KVQADNITCNTLINAYSKIGDLKS 387
V ++N++L ++ +A K E+ EK + D +T NT+I A + G +
Sbjct: 152 NCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDD 211
Query: 388 ALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVD 447
L ++ ++G +PD ++ L+ F + + + M +P+ SY+ V
Sbjct: 212 ILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVR 271
Query: 448 GYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISG 507
G + L L D ++G+ D Y ALI +E K + M+ G++
Sbjct: 272 GLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTP 331
Query: 508 DSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
D+V Y L K G A V EE K +L+ +Y
Sbjct: 332 DTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMY 371
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/396 (19%), Positives = 172/396 (43%), Gaps = 22/396 (5%)
Query: 54 PSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXX 113
P ++ FF WV+ ++H + M+ I + ++ +++ ++
Sbjct: 169 PHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNG--------- 219
Query: 114 XXXRIHDDPEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSL 171
+ + +W L+ Y K++ L VFE+MR + A +++ SL
Sbjct: 220 ----------CDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 172 LKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDI 231
G ++ + +K +++ G+ + Y L+ +KS V+ + + ++M + +
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEH 329
Query: 232 FTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE 291
+ L+ +C G EAL + +++ + + LD + L+ G C+ RM +A +
Sbjct: 330 DAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDI 389
Query: 292 IKDAT-PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
+K + Y +I GY + N++ +AL+ E+++ G P V+TY I++ L + +
Sbjct: 390 MKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQF 449
Query: 351 RDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
L NEM E ++ D++ ++ + + A K + M E G+KP +Y
Sbjct: 450 EKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIF 509
Query: 411 IHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
+ C+ + ++ M + +SW++
Sbjct: 510 VKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVI 545
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 157/364 (43%), Gaps = 38/364 (10%)
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+DG + IYN ++ ++R+++ +L++EME+ G DI T+ LIS+Y K
Sbjct: 182 KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIG 241
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLI 306
+ L + +KM + G LD +YN +I C GR A + E+ K T TY L+
Sbjct: 242 KGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLL 301
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
D K+ ++D + + M + +L+ C G+I++A +L+ E+ K++
Sbjct: 302 DCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEM- 360
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
C D ++ L+ G C+ + + A E+
Sbjct: 361 -----C-----------------------------LDAKYFEILVKGLCRANRMVDALEI 386
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
+ M S Y I+ GY ++++V L + G S Y +++ L K
Sbjct: 387 VDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFK 445
Query: 487 IEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKI 546
++Q E LF M NGI DSV T++ + + + A V M ++ + T K
Sbjct: 446 LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKS 505
Query: 547 YSCF 550
YS F
Sbjct: 506 YSIF 509
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 12/311 (3%)
Query: 149 FEQMR--LYQLKPHLPACT-----VLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
F+QMR Y+++ T +++ + G TN+ + K + G++ + + C
Sbjct: 694 FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKC 753
Query: 202 LIHAC--SKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER 259
LI K R+VE A + EM G VPD + C+ G +A S D + +
Sbjct: 754 LITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGK 813
Query: 260 EGINLDIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVTYTTLIDGYCKANELDQ 317
G + V+Y+ I C+ G++ EA + E + + + TY +++ G + +L +
Sbjct: 814 IGFPV-TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQK 872
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
AL M+ G PGV Y S++ ++ ++ + +M + + +T +I
Sbjct: 873 ALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMIC 932
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
Y +G ++ A M E G PD TY I+ C+ + E A +LL MLD G P
Sbjct: 933 GYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
Query: 438 SYCSYSWIVDG 448
S ++ + G
Sbjct: 993 STINFRTVFYG 1003
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 149/350 (42%), Gaps = 5/350 (1%)
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
++G N YN I +D ++ + L EM +G + T+ +I Y + G+
Sbjct: 671 RNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTN 730
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFC-KEGR-MREATRMFSEIKDA--TPNHVTYTT 304
A+ +M+ G+ ++ LI C K+GR + EATR F E+ + P+
Sbjct: 731 IAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQD 790
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
+ C+ A + + G +P Y+ +R LC+ G++ +A L ++
Sbjct: 791 YLGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALCRIGKLEEALSELASFEGER 849
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
D T ++++ + GDL+ AL N M E G KP Y +LI F K +LE
Sbjct: 850 SLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVL 909
Query: 425 ELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
E M PS +Y+ ++ GY V+ +G D Y I L
Sbjct: 910 ETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCL 969
Query: 485 CKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
C+ + E A KL M GI+ ++ + ++ Y + GK +A L++
Sbjct: 970 CQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQK 1019
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 154/359 (42%), Gaps = 22/359 (6%)
Query: 60 FFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIH 119
FF WV Y H+ + I++ K FK + + ++ +
Sbjct: 664 FFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCL------------- 710
Query: 120 DDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
+ + +++ Y ++ +T A++ F++M+ L P L++ L + NV
Sbjct: 711 ----ITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNV 766
Query: 180 --VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ + +++ G V + + + + + + AK L+ + + G P Y+
Sbjct: 767 EEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIY 825
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--A 295
I C+ G EALS E E LD +Y S+++G + G +++A + +K+
Sbjct: 826 IRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGT 885
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P YT+LI + K +L++ L+ + ME + P V TY +++ G++ +A
Sbjct: 886 KPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWN 945
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
M E+ D T + IN + + ALK ++ML+ G+ P ++ + +G
Sbjct: 946 AFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGL 1004
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 110/299 (36%), Gaps = 40/299 (13%)
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYC--K 311
+M R+G + ++ +I + + G A R F E+KD P+ T+ LI C K
Sbjct: 703 EMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKK 762
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
+++A + M G P L LC+ G +DA L+ + + +
Sbjct: 763 GRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV-TVA 821
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
+ I A +IG L+ AL D +TY +++HG + +L+ A + + M
Sbjct: 822 YSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMK 881
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
+ G P VY +LI K +Q+E
Sbjct: 882 EIGTKPG-----------------------------------VHVYTSLIVYFFKEKQLE 906
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
+ MEG V YT++ Y GK A N M +R K YS F
Sbjct: 907 KVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKF 965
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
Q AL M+ KP + T L+ K+ V + +++ + ++ Y +
Sbjct: 871 QKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAM 930
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
I VE A MEE+G PD TY+ I+ C+ +AL + +M +GI
Sbjct: 931 ICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGI 990
Query: 263 NLDIVSYNSLIYGFCKEGR 281
+++ ++ YG +EG+
Sbjct: 991 APSTINFRTVFYGLNREGK 1009
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
V + L++++ K + + L+ ++M +P + T ++ + G W + +
Sbjct: 891 VYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNM 950
Query: 188 VQDGVVLNIYIY----NCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
+ G + Y NCL AC KS D A +LL+EM +KG+ P + T+ +
Sbjct: 951 EERGTSPDFKTYSKFINCLCQAC-KSED---ALKLLSEMLDKGIAPSTINFRTVFYGLNR 1006
Query: 244 KGMH 247
+G H
Sbjct: 1007 EGKH 1010
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 199/423 (47%), Gaps = 24/423 (5%)
Query: 124 VNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
++ +++W L+ Y + A+ + ++M + + + T ++S L+ +G
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+ +++ GVV N + ACS + + + ++ + + G + D+ N+L+ +Y
Sbjct: 338 DMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMY 397
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNH 299
K G +A + D ++ N D+ ++NS+I G+C+ G +A +F+ ++DA PN
Sbjct: 398 SKCGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNI 453
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKG-LYPGVATYNSILRKLCQDGRIRDANKLLN 358
+T+ T+I GY K + +A+ + + ME G + AT+N I+ Q+G+ +A +L
Sbjct: 454 ITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR 513
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD 418
+M + +++T +L+ A + + K + +L L AL + K
Sbjct: 514 KMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSG 573
Query: 419 ELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
++E ++ + GM T +++ ++ GY + LAL ++ ++G+ +
Sbjct: 574 DIEYSRTIFLGME----TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLS 629
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY------TSLAYAYWKSGKTSVASNVL 532
++I + ++ +K+FY I+ D I +++ Y Y ++ + A +
Sbjct: 630 SIILAHGLMGNVDEGKKVFY-----SIANDYHIIPALEHCSAMVYLYGRANRLEEALQFI 684
Query: 533 EEM 535
+EM
Sbjct: 685 QEM 687
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 171/360 (47%), Gaps = 49/360 (13%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ YAK DA +VF+ MR + +L + ++ + ++ V K+ + +++DG
Sbjct: 121 LLSMYAKCGCIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
V+ + +++ ++ C+ DVE K + + + + G+ + N+++++Y K G L
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG----EL 232
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGY 309
K R D++++NS++ +C+ G+ EA + E++ +P VT+ LI GY
Sbjct: 233 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSIL----------------RKLCQDGRIRDA 353
+ + D A+ + + ME G+ V T+ +++ RK+ G + +A
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 354 N------------KLLNEMSEKKVQA-------DNITCNTLINAYSKIGDLKSALKFKNK 394
K++N+ SE A D + N+L++ YSK G L+ A K
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA----RK 408
Query: 395 MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDN 454
+ +S D +T+ ++I G+C+ A EL M DA P+ +++ ++ GY K +
Sbjct: 409 VFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGD 468
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 168/435 (38%), Gaps = 77/435 (17%)
Query: 171 LLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPD 230
L ++G+ K L Q G + Y L+ +C S + + +L+ PD
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGR-ILHARFGLFTEPD 114
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
+F L+S+Y K G +A + D M ++ +++++I + +E R RE ++F
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 291 -EIKDAT-PNHVTYTTLIDG-----------------------------------YCKAN 313
+KD P+ + ++ G Y K
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
ELD A K M + V +NS+L CQ+G+ +A +L+ EM ++ + +T N
Sbjct: 231 ELDFATKFFRRMRERD----VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
LI Y+++G +A+ KM G+ D FT+ A+I G A ++ M A
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 434 GFTP---------SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL------------ 472
G P S CS +++ + ++ + D+ L +
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Query: 473 ----------DASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKS 522
D + ++I C+ A +LF M+ + + + + ++ Y K+
Sbjct: 407 RKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKN 466
Query: 523 GKTSVASNVLEEMAK 537
G A ++ + M K
Sbjct: 467 GDEGEAMDLFQRMEK 481
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/517 (21%), Positives = 210/517 (40%), Gaps = 77/517 (14%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN----- 178
+++ L L + AKS T A+ V + M PH+ A T ++SL G
Sbjct: 151 LDANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESI 210
Query: 179 ----VVWKIHKRLVQDGVV----LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPD 230
+ + KR +V + +N +++AC+ D ++ +L EM E PD
Sbjct: 211 KLFIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPD 270
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
+ TYN +I L + G + + +++ +GI + + + +SL+ + G +R A R+
Sbjct: 271 VLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQ 330
Query: 291 EIKD----------------------------------------ATPNHVTYTTLIDGYC 310
+++ + + V+ ++D +
Sbjct: 331 AMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFK 390
Query: 311 K--ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM---SEKKV 365
K N +D + + L K P Y ++++ ++GR+ D ++L M ++
Sbjct: 391 KLLPNSVDPSGEPPLL--PKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNS 448
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
D +T T+++A+ G + A + +M G+ + TY L+ G+CK +++ A++
Sbjct: 449 HPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAED 508
Query: 426 LLFGML-DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
LL M DAG P SY+ I+DG D+ LA +E ++G+ Y L++
Sbjct: 509 LLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAF 568
Query: 485 CKIEQIECAEKLFYHMEGNG-ISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIIT 543
Q + A ++F M + + D + + L Y + G A V+ M +
Sbjct: 569 AMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPN 628
Query: 544 AKIYSCFSVPDGHGENKVSQ--------MFWDHVVER 572
Y G N VSQ + W + ER
Sbjct: 629 VATY-------GSLANGVSQARKPGDALLLWKEIKER 658
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 142/312 (45%), Gaps = 26/312 (8%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLP---ACTVLLSSLLKDGTTNVVW 181
+S++ + L+ Y K+ D ++ E MR + P T ++S+ + G +
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM-EEKGVVPDIFTYNTLISL 240
++ + + GV N YN L+ K ++RA+ LL EM E+ G+ PD+ +YN +I
Sbjct: 473 QVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD---ATP 297
AL+ ++M GI +SY +L+ F G+ + A R+F E+ +
Sbjct: 533 CILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKV 592
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
+ + + L++GYC+ ++ A +V M+ G YP VATY S+ + Q + DA L
Sbjct: 593 DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLW 652
Query: 358 NEMSEK-------------------KVQADNITCNTLINAYSKIGDLKSALKFKNKMLES 398
E+ E+ ++ D +TL + + K AL+ M E+
Sbjct: 653 KEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEEN 712
Query: 399 GLKPDPFTYKAL 410
G+ P+ YK +
Sbjct: 713 GIPPNKTKYKKI 724
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 171/357 (47%), Gaps = 3/357 (0%)
Query: 134 IHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVV 193
I + ++ AL++++ + K ++ C +LS L+K+G + K+ ++ +DG+
Sbjct: 139 IKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLK 198
Query: 194 LNIYIYNCLIHACSKSRD-VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
++ YN L+ C K ++ +A +L+ E+ G+ D Y T++++ G EA +
Sbjct: 199 PDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAEN 258
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYC 310
+M+ EG + +I Y+SL+ + +G ++A + +E+K PN V TTL+ Y
Sbjct: 259 FIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYI 318
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
K D++ ++ +E+ G Y ++ L + G++ +A + ++M K V++D
Sbjct: 319 KGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGY 378
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
+ +I+A + K A + + K D ++ +C+ E+ES ++ M
Sbjct: 379 ANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKM 438
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
+ +P Y ++ ++ + K+ + SKG L+ + +LI L KI
Sbjct: 439 DEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKI 495
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 152/295 (51%), Gaps = 9/295 (3%)
Query: 126 SQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK--DGTTNVVWKI 183
+ +LS LV K+ +++F+QM+ LKP + LL+ +K +G + I
Sbjct: 170 NSILSCLV----KNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELI 225
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
+ L +G+ ++ +Y ++ C+ + E A+ + +M+ +G P+I+ Y++L++ Y
Sbjct: 226 GE-LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSW 284
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVT 301
KG + +A + +M+ G+ + V +L+ + K G + + SE++ A N +
Sbjct: 285 KGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMP 344
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
Y L+DG KA +L++A + + M+ KG+ + ++ LC+ R ++A +L +
Sbjct: 345 YCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSE 404
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
+ D + NT++ AY + G+++S ++ KM E + PD T+ LI F K
Sbjct: 405 TTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK 459
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 150/322 (46%), Gaps = 5/322 (1%)
Query: 217 QLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGF 276
QL M++ G + + TY++ I K + +AL I + E +++ NS++
Sbjct: 119 QLFEWMQQHGKI-SVSTYSSCIKFVGAKNVS-KALEIYQSIPDESTKINVYICNSILSCL 176
Query: 277 CKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKA-NELDQALKVRELMEAKGLYPG 333
K G++ ++F ++K P+ VTY TL+ G K N +A+++ + G+
Sbjct: 177 VKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMD 236
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
Y ++L +GR +A + +M + + ++L+N+YS GD K A +
Sbjct: 237 SVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMT 296
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
+M GL P+ L+ + K + ++ELL + AG+ + Y ++DG K
Sbjct: 297 EMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAG 356
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
++ ++ D+ KG+ D +I LC+ ++ + A++L E D V+
Sbjct: 357 KLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLN 416
Query: 514 SLAYAYWKSGKTSVASNVLEEM 535
++ AY ++G+ ++++M
Sbjct: 417 TMLCAYCRAGEMESVMRMMKKM 438
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 125/266 (46%), Gaps = 2/266 (0%)
Query: 119 HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
H+ +++S + ++ A + +++A +QM++ P++ + LL+S G
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
++ + G+V N + L+ K +R+++LL+E+E G + Y L+
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF--SEIKDAT 296
K G EA SI D M+ +G+ D + + +I C+ R +EA + SE
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
+ V T++ YC+A E++ +++ + M+ + + P T++ +++ ++ A +
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQT 469
Query: 357 LNEMSEKKVQADNITCNTLINAYSKI 382
+M K + + C++LI KI
Sbjct: 470 TLDMHSKGHRLEEELCSSLIYHLGKI 495
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 185/432 (42%), Gaps = 40/432 (9%)
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
KS DA++++ +M+ P LL LK ++ +++VQ+GV + +
Sbjct: 336 KSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCW 395
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
YN LI ++ E L ++++KG D T++ + C++G A+ + ++M
Sbjct: 396 TYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455
Query: 258 EREGINLDIVSYNSLIYGFCKEGR----------MREAT-----------------RMFS 290
E G ++D+V+ +SL+ GF K+GR +RE R S
Sbjct: 456 ETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQS 515
Query: 291 EIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
+ KD TP + + +D D E+ + + Y + Q
Sbjct: 516 KDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPY------MDQLAHQ 569
Query: 351 RDANKLLNEMSE-KKVQA-----DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP-D 403
R+ K L ++ ++V+A D NT ++ Y GDL A K G+
Sbjct: 570 RNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLT 629
Query: 404 PFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPD 463
+TY +++ F K ++A+ +L M + +Y+ I+ G K D A+ D
Sbjct: 630 SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLD 689
Query: 464 EFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
+G LD +Y LI L K +++ A +LF HM+ NGI+ D V Y ++ K+G
Sbjct: 690 RLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAG 749
Query: 524 KTSVASNVLEEM 535
K A L+ M
Sbjct: 750 KLKEAYKYLKAM 761
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 190/431 (44%), Gaps = 29/431 (6%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMR-LYQLKP----HLPACTVLLSSLLKDGTT 177
+ NS +S V+ R + D + + R Y L+P A + + ++ + G
Sbjct: 49 DANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLL 108
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
V + + +DGV L+ + L+ + +S E A +L+ MEE G + Y+++
Sbjct: 109 GEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSV 168
Query: 238 ISLYCKKGMHYEALSIQDKMEREGIN--------LDIVSY-------NSLIYGFCKEGRM 282
+ KK ALSI K+ N + IVSY N L+ G +
Sbjct: 169 LIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMR 228
Query: 283 REATRMFSEIKDATP---NHVTYTTLIDGYCKANELDQALKV-RELMEAKGLY-----PG 333
E R+F ++K + +Y I G+ +LD AL + +E+ E +Y P
Sbjct: 229 SEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPD 288
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
+ TYNS++ LC G+ +DA + +E+ + DN T LI K + A++
Sbjct: 289 ICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYG 348
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
+M +G PD Y L+ G K ++ A +L M+ G S +Y+ ++DG +
Sbjct: 349 EMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNG 408
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
+A L + KG +DA + + +LC+ ++E A KL ME G S D V +
Sbjct: 409 RAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTIS 468
Query: 514 SLAYAYWKSGK 524
SL + K G+
Sbjct: 469 SLLIGFHKQGR 479
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 9/288 (3%)
Query: 194 LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVV------PDIFTYNTLISLYCKKGMH 247
+ + YN IH D++ A L EM+E+ V PDI TYN+LI + C G
Sbjct: 246 FDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKA 305
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTL 305
+AL + D+++ G D +Y LI G CK RM +A R++ E++ P+ + Y L
Sbjct: 306 KDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCL 365
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
+DG KA ++ +A ++ E M +G+ TYN ++ L ++GR L ++ +K
Sbjct: 366 LDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQ 425
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
D IT + + + G L+ A+K +M G D T +L+ GF K + ++
Sbjct: 426 FVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEK 485
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLD 473
L+ + + P+ ++ V+ K+ P F SKG LD
Sbjct: 486 LMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTP-MFPSKGSFLD 532
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 196/461 (42%), Gaps = 38/461 (8%)
Query: 142 TQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
+DAL V++++++ +P +L+ K + +I+ + +G V + +YNC
Sbjct: 305 AKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNC 364
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
L+ K+R V A QL +M ++GV +TYN LI + G ++ ++++G
Sbjct: 365 LLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKG 424
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQAL 319
+D ++++ + C+EG++ A ++ E+ + + + VT ++L+ G+ K D
Sbjct: 425 QFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKE 484
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN---------KLLNEMSEKKVQADNI 370
K+ + + L P V +N+ + + + +D + L+ MS + D
Sbjct: 485 KLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGA 544
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
+ + D S+ + +++ +P P + G + +E+ +
Sbjct: 545 SAEEVSPMED---DPWSSSPYMDQLAHQRNQPKP------LFGLARGQRVEAKPD----S 591
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC-LDASVYRALIRRLCKIEQ 489
D ++ S Y K ++ L + F G+ L + Y +++ K
Sbjct: 592 FDVDMMNTFLSI------YLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGY 645
Query: 490 IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSC 549
+ A + M N + D Y + K G+ +AS VL+ + K+ + +Y+
Sbjct: 646 FQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNT 705
Query: 550 FSVPDGHGE--NKVSQMFWDHVVERGL----MSRNTMRKIQ 584
G ++ +Q+F DH+ G+ +S NTM ++
Sbjct: 706 LINALGKATRLDEATQLF-DHMKSNGINPDVVSYNTMIEVN 745
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 137/338 (40%), Gaps = 25/338 (7%)
Query: 218 LLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFC 277
LL M+E GV D L+ + G AL + D ME G L+ Y+S++
Sbjct: 114 LLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALV 173
Query: 278 KEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATY 337
K+ +R A + ++ +A+ NH ++ + + V L PG
Sbjct: 174 KKHELRLALSILFKLLEASDNH-----------SDDDTGRVIIVSYL-------PGTVAV 215
Query: 338 NSILRKLCQDGRIRDANKLLNEMSE-KKVQADNITCNTLINAYSKIGDLKSALKFKNKML 396
N +L L + + ++ ++ K+ + D + N I+ + GDL +AL +M
Sbjct: 216 NELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMK 275
Query: 397 E------SGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYC 450
E S PD TY +LIH C + + A + + +G P +Y ++ G C
Sbjct: 276 ERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCC 335
Query: 451 KKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSV 510
K +D + + E G D VY L+ K ++ A +LF M G+
Sbjct: 336 KSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCW 395
Query: 511 IYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
Y L +++G+ + ++ K+ + A +S
Sbjct: 396 TYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFS 433
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 230 DIFTYNTLISLYCKKGMHYEALSIQDKMEREGI-NLDIVSYNSLIYGFCKEGRMREATRM 288
D+ NT +S+Y KG A + + G+ +L +YNS++ F K+G + A +
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 289 FSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQ 346
++ + + TY +I G K D A V + + +G Y + YN+++ L +
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 347 DGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFT 406
R+ +A +L + M + D ++ NT+I SK G LK A K+ ML++G P+ T
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
Query: 146 LQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHA 205
++F M + L + ++SS +K G + ++ ++ +I YN +I
Sbjct: 617 FEIFNGMGVTDLTSY--TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQG 674
Query: 206 CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLD 265
K + A +L+ + ++G DI YNTLI+ K EA + D M+ GIN D
Sbjct: 675 LGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPD 734
Query: 266 IVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTL 305
+VSYN++I K G+++EA + + DA PNHVT T L
Sbjct: 735 VVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 165/370 (44%), Gaps = 8/370 (2%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y K A +V + P++ + T L+ S + G N I +R+ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 192 VVLNIYIYNCLIHA---CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ Y ++ K ++ E + L + ++ + PD Y+ +I +Y K G +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLI 306
+A + M +G+ V+YNSL+ E +E ++++ +++ D P+ V+Y LI
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLI 321
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
Y +A ++AL V E M G+ P YN +L G + A + M ++
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 381
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
D + T+++AY D++ A KF ++ G +P+ TY LI G+ K +++E E+
Sbjct: 382 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
M +G + + I+D + N + L E S G+ D L+
Sbjct: 442 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLAST 501
Query: 487 IEQIECAEKL 496
+++E A++L
Sbjct: 502 QDELEEAKEL 511
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 141/319 (44%), Gaps = 8/319 (2%)
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
LI A K + A+++L+ + + G P++ +Y L+ Y + G A +I +M+ G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT-----PNHVTYTTLIDGYCKANELD 316
++Y ++ F + + +EA +F + D P+ Y +I Y KA +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+A KV M KG+ TYNS++ + ++ +K+ ++M +Q D ++ LI
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLI 321
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
AY + + AL +ML++G++P Y L+ F +E AK + M
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 381
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
P SY+ ++ Y +++ G + Y LI+ K +E ++
Sbjct: 382 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 497 FYHMEGNGISGDSVIYTSL 515
+ M +GI + I T++
Sbjct: 442 YEKMRLSGIKANQTILTTI 460
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 348 GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
G A ++L+ +S+ + I+ L+ +Y + G +A +M SG +P TY
Sbjct: 153 GNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITY 212
Query: 408 KALIHGFCKMDELESAKELLFGMLD---AGFTPSYCSYSWIVDGYCKKDNVDAILALPDE 464
+ ++ F + D+ + A+E+ +LD + P Y ++ Y K N + +
Sbjct: 213 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 272
Query: 465 FLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGK 524
+ KG+ Y +L+ +++ K++ M+ + I D V Y L AY ++ +
Sbjct: 273 MVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARR 329
Query: 525 TSVASNVLEEMAKRRLIITAKIYSCF 550
A +V EEM + T K Y+
Sbjct: 330 EEEALSVFEEMLDAGVRPTHKAYNIL 355
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 165/370 (44%), Gaps = 8/370 (2%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y K A +V + P++ + T L+ S + G N I +R+ G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 192 VVLNIYIYNCLIHA---CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ Y ++ K ++ E + L + ++ + PD Y+ +I +Y K G +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLI 306
+A + M +G+ V+YNSL+ E +E ++++ +++ D P+ V+Y LI
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLI 328
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
Y +A ++AL V E M G+ P YN +L G + A + M ++
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 388
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
D + T+++AY D++ A KF ++ G +P+ TY LI G+ K +++E E+
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 448
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
M +G + + I+D + N + L E S G+ D L+
Sbjct: 449 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLAST 508
Query: 487 IEQIECAEKL 496
+++E A++L
Sbjct: 509 QDELEEAKEL 518
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 153/363 (42%), Gaps = 19/363 (5%)
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
LI A K + A+++L+ + + G P++ +Y L+ Y + G A +I +M+ G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT-----PNHVTYTTLIDGYCKANELD 316
++Y ++ F + + +EA +F + D P+ Y +I Y KA +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+A KV M KG+ TYNS++ + ++ +K+ ++M +Q D ++ LI
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALLI 328
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFT 436
AY + + AL +ML++G++P Y L+ F +E AK + M
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 388
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
P SY+ ++ Y +++ G + Y LI+ K +E ++
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 448
Query: 497 FYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGH 556
+ M +GI + I T++ A + A +EM SC PD
Sbjct: 449 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEME-----------SCGVPPDQK 497
Query: 557 GEN 559
+N
Sbjct: 498 AKN 500
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 154/319 (48%), Gaps = 5/319 (1%)
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
+V+DGV L+ Y+ +I + +A + M + G++PD TY+ ++ +Y K G
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTT 304
E LS+ ++ G D ++++ L F + G + E+K D PN V Y T
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 305 LIDGYCKANELDQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
L++ +A + A + E++EA GL P T ++++ + RDA +L EM K
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEA-GLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLES-GLKPDPFTYKALIHGFCKMDELES 422
K D I NTL+N + IG + A + N M ES +PD F+Y A+++ + + E
Sbjct: 391 KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEK 450
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
A EL ML AG + + +V K +D ++ + D + +G+ D + L+
Sbjct: 451 AMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLS 510
Query: 483 RLCKIEQIECAEKLFYHME 501
+ E E AEK+ +E
Sbjct: 511 VMALCESSEDAEKVMACLE 529
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 123/245 (50%), Gaps = 3/245 (1%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
Y+KS ++ L ++E+ KP A +VL + G + + + + + V N
Sbjct: 266 YSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPN 325
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ +YN L+ A ++ A+ L NEM E G+ P+ T L+ +Y K +AL + +
Sbjct: 326 VVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWE 385
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT---PNHVTYTTLIDGYCKA 312
+M+ + +D + YN+L+ G EA R+F+++K++ P++ +YT +++ Y
Sbjct: 386 EMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSG 445
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
+ ++A+++ E M G+ V +++ L + RI D + + ++ V+ D+ C
Sbjct: 446 GKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLC 505
Query: 373 NTLIN 377
L++
Sbjct: 506 GCLLS 510
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 2/248 (0%)
Query: 292 IKDATP-NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
+KD +++TY+T+I + N ++A++ E M GL P TY++IL + G++
Sbjct: 213 VKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKV 272
Query: 351 RDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
+ L + D I + L + + GD +M +KP+ Y L
Sbjct: 273 EEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTL 332
Query: 411 IHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
+ + + A+ L ML+AG TP+ + + +V Y K L L +E +K
Sbjct: 333 LEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKW 392
Query: 471 CLDASVYRALIRRLCKIEQIECAEKLFYHM-EGNGISGDSVIYTSLAYAYWKSGKTSVAS 529
+D +Y L+ I E AE+LF M E D+ YT++ Y GK A
Sbjct: 393 PMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAM 452
Query: 530 NVLEEMAK 537
+ EEM K
Sbjct: 453 ELFEEMLK 460
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 36/286 (12%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+ D E+++ S ++ + + A++ FE+M L P + +L K G
Sbjct: 213 VKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKV 272
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
V +++R V G + ++ L ++ D + + +L EM+ V P++ YNTL
Sbjct: 273 EEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTL 332
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP 297
+ + G A S+ ++M G+ TP
Sbjct: 333 LEAMGRAGKPGLARSLFNEMLEAGL---------------------------------TP 359
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD-GRIRDANKL 356
N T T L+ Y KA AL++ E M+AK YN++L +C D G +A +L
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLL-NMCADIGLEEEAERL 418
Query: 357 LNEMSEK-KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK 401
N+M E + + DN + ++N Y G + A++ +ML++G++
Sbjct: 419 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQ 464
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
Query: 325 MEAKGLYPGVATYNSILRKLCQDGR-IRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
+++K L+P + ++ K + GR + ++ EM + V+ DNIT +T+I +
Sbjct: 176 VKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCN 235
Query: 384 DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYS 443
A+++ +M ++GL PD TY A++ + K ++E L + G+ P ++S
Sbjct: 236 LYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFS 295
Query: 444 WIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGN 503
+ + + + D I + E S + + VY L+ + + + A LF M
Sbjct: 296 VLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEA 355
Query: 504 GISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
G++ + T+L Y K+ A + EEM ++
Sbjct: 356 GLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%)
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
+M++ G++ D TY +I + + A E M G P +YS I+D Y K
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
V+ +L+L + ++ G DA + L + + + + M+ + + V+Y
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 514 SLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
+L A ++GK +A ++ EM + L K +
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTAL 367
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 159/375 (42%), Gaps = 87/375 (23%)
Query: 84 LAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLS-WLVIHYAKSRMT 142
LA+ KHF Q+LD I + P+ S+ + +I Y ++ M
Sbjct: 85 LAREKHFVAVSQLLDGF-----------------IQNQPDPKSESFAVRAIILYGRANML 127
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
++Q F + Y++ R V+ N L
Sbjct: 128 DRSIQTFRNLEQYEIP---------------------------RTVKS--------LNAL 152
Query: 203 IHACSKSRDVERAKQLLNEMEEK-GVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
+ AC ++D + A ++ EM + G+ PD+ TYN +I + C+ G + SI +MER+
Sbjct: 153 LFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKW 212
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKV 321
I P ++ +IDG+ K + D+ KV
Sbjct: 213 IK---------------------------------PTAASFGLMIDGFYKEEKFDEVRKV 239
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+M+ G++ GVATYN +++ LC+ + +A L++ + +++ +++T + LI+ +
Sbjct: 240 MRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCS 299
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
+L A+ M+ +G KPD Y LIH CK + E+A L ++ + PS+
Sbjct: 300 EENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSV 359
Query: 442 YSWIVDGYCKKDNVD 456
W+V+G + VD
Sbjct: 360 MKWLVNGLASRSKVD 374
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 1/190 (0%)
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
E+ + G+ P + TYN ++R LC+ G + ++ EM K ++ + +I+ + K
Sbjct: 171 EMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKE 230
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSY 442
K M E G+ TY +I CK + AK L+ G++ P+ +Y
Sbjct: 231 EKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTY 290
Query: 443 SWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH-ME 501
S ++ G+C ++N+D + L + + G D+ Y LI LCK E A L ME
Sbjct: 291 SLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESME 350
Query: 502 GNGISGDSVI 511
N + SV+
Sbjct: 351 KNWVPSFSVM 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 1/221 (0%)
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK-KVQA 367
Y +AN LD++++ +E + V + N++L ++AN++ EM + ++
Sbjct: 121 YGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEP 180
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
D T N +I + G S+ +M +KP ++ +I GF K ++ + ++++
Sbjct: 181 DLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVM 240
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M + G +Y+ ++ CK+ AL D +S + ++ Y LI C
Sbjct: 241 RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSE 300
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
E ++ A LF M NG DS Y +L + K G A
Sbjct: 301 ENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETA 341
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 148 VFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACS 207
+ +M +KP + +++ K+ + V K+ + + + GV + + YN +I
Sbjct: 204 IVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263
Query: 208 KSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIV 267
K + AK L++ + + P+ TY+ LI +C + EA+++ + M G D
Sbjct: 264 KRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSE 323
Query: 268 SYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQA 318
Y +LI+ CK G A + E K+ P+ L++G +++D+A
Sbjct: 324 CYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEA 376
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 207/460 (45%), Gaps = 71/460 (15%)
Query: 127 QVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
V++W L+ YA++ M + L +F +M+ +P+ L L ++G ++H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+V++G+ I + N LI+ K +V +A+ L ++ E K VV T+N++IS Y
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV----TWNSMISGYAAN 273
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLI---------------------YGFCKEGRMR 283
G+ EAL + M + L S+ S+I YGF + +R
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 284 --------------EATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKG 329
+A R+F EI N V++T +I G+ + + ++A+ + M+ KG
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEI-GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 330 LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
+ P TY+ IL L + +++ ++ + + + L++AY K+G ++ A
Sbjct: 393 VRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 390 KFKNKMLESGLK-PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
K + SG+ D + A++ G+ + E E+A ++ + G P+ ++S I++
Sbjct: 449 K-----VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN- 502
Query: 449 YCKKDNVDAILALPDEF--------LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM 500
C N A + +F L LC+ + AL+ K IE AE++F
Sbjct: 503 VCAATN--ASMGQGKQFHGFAIKSRLDSSLCVSS----ALLTMYAKKGNIESAEEVFKRQ 556
Query: 501 EGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
D V + S+ Y + G+ A +V +EM KR++
Sbjct: 557 R----EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 181/444 (40%), Gaps = 93/444 (20%)
Query: 167 LLSSLLKDGTTNVVWK-----------------------------------IHKRLVQDG 191
LL +DG T + +H + ++ G
Sbjct: 64 LLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFG 123
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+ ++ + L+ K + + +++ +EM+E+ VV T+ TLIS Y + M+ E L
Sbjct: 124 FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV----TWTTLISGYARNSMNDEVL 179
Query: 252 SIQDKMEREGINLDIVSY-----------------------------------NSLIYGF 276
++ +M+ EG + ++ NSLI +
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 277 CKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELD-QALKVRELMEAKGLYPGVA 335
K G +R+A +F K + VT+ ++I GY AN LD +AL + M + +
Sbjct: 240 LKCGNVRKARILFD--KTEVKSVVTWNSMISGYA-ANGLDLEALGMFYSMRLNYVRLSES 296
Query: 336 TYNSILRKLCQD-GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK-FKN 393
++ S++ KLC + +R +L + + D L+ AYSK + AL+ FK
Sbjct: 297 SFASVI-KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK- 354
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD 453
E G + ++ A+I GF + D E A +L M G P+ +YS I+
Sbjct: 355 ---EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL---- 407
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
V + + + + ++V AL+ K+ ++E A K+F ++ D V ++
Sbjct: 408 PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAWS 463
Query: 514 SLAYAYWKSGKTSVASNVLEEMAK 537
++ Y ++G+T A + E+ K
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTK 487
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 136/324 (41%), Gaps = 57/324 (17%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E +S V + L+ Y K ++A +VF + + A + +L+ + G T K
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGID----DKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSR-DVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+ L + G+ N + ++ +++ C+ + + + KQ + + + + L+++Y
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA------ 295
KKG + E+ K +RE D+VS+NS+I G+ + G+ +A +F E+K
Sbjct: 541 AKKG-NIESAEEVFKRQREK---DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 296 --------------------------------TPNHVTYTTLIDGYCKANELDQALKVRE 323
P + ++D Y +A +L++A+KV E
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 324 LMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ---ADNITCNTLINAYS 380
M P A ++I R + R+ +L +EK + D+ L N Y+
Sbjct: 657 NM------PNPAG-STIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYA 709
Query: 381 KIGDLKSALKFKNKMLESGLKPDP 404
+ GD + K + M E +K +P
Sbjct: 710 ESGDWQERAKVRKLMNERNVKKEP 733
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 163/341 (47%), Gaps = 40/341 (11%)
Query: 77 SWA-MIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSW--LV 133
SW MI AK K + A++ D++ PE V+SW ++
Sbjct: 200 SWTVMITGFAKVKDLENARKYFDRM---------------------PE--KSVVSWNAML 236
Query: 134 IHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVV 193
YA++ T+DAL++F M ++P+ +++S+ ++ + K + + V
Sbjct: 237 SGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVR 296
Query: 194 LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
LN ++ L+ +K RD++ A+++ NE+ G ++ T+N +IS Y + G A +
Sbjct: 297 LNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQL 353
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPNHVTYTTLIDGYC 310
D M + ++VS+NSLI G+ G+ A F ++ D+ P+ VT +++
Sbjct: 354 FDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACG 409
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
+L+ + + + + + Y S++ + G + +A ++ +EM E+ V +
Sbjct: 410 HMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDV----V 465
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI 411
+ NTL A++ GD L +KM + G++PD TY +++
Sbjct: 466 SYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVL 506
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 181/441 (41%), Gaps = 85/441 (19%)
Query: 184 HKRLVQDGVVL-NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ RL+ D V N+++ N + SK +L + G++PD F++ +I
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG 117
Query: 243 KKGMHYEALS-----IQDKMEREGIN---------------LDIVS------YNSLIYGF 276
+ G+ ++AL +D R I D +S +N +I G+
Sbjct: 118 RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGY 177
Query: 277 CKEGRMREATRMFSEIKDATPNH--VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGV 334
K G EA ++F D P + V++T +I G+ K +L+ A K + M K V
Sbjct: 178 WKWGNKEEACKLF----DMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEK----SV 229
Query: 335 ATYNSILRKLCQDGRIRDANKLLNEM---------------------------------- 360
++N++L Q+G DA +L N+M
Sbjct: 230 VSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKL 289
Query: 361 -SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
EK+V+ + L++ ++K D++SA + N++ G + + T+ A+I G+ ++ +
Sbjct: 290 IDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGD 346
Query: 420 LESAKELLFGMLDAGFTPSYCSYSW--IVDGYCKKDNVDAILALPDEFLSKGLCLDASVY 477
+ SA++L M P SW ++ GY + ++ + G V
Sbjct: 347 MSSARQLFDTM------PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT 400
Query: 478 RALIRRLC-KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
+ C + +E + + ++ N I + Y SL + Y + G A V +EM
Sbjct: 401 MISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK 460
Query: 537 KRRLIITAKIYSCFSVPDGHG 557
+R ++ +++ F+ +G G
Sbjct: 461 ERDVVSYNTLFTAFAA-NGDG 480
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 30/240 (12%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIA-HRDFXXXXXXXXXXXRIHD--------DPEVNSQVL 129
A++ + AK + ++A+++ +++ R+ RI D D V+
Sbjct: 304 ALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVV 363
Query: 130 SW--LVIHYAKSRMTQDALQVFEQMRLY-QLKPH-------LPACTVLLSSLLKDGTTNV 179
SW L+ YA + A++ FE M Y KP L AC + L D +
Sbjct: 364 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDY 423
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
+ K +L G Y LI ++ ++ AK++ +EM+E+ D+ +YNTL +
Sbjct: 424 IRKNQIKLNDSG-------YRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFT 472
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNH 299
+ G E L++ KM+ EGI D V+Y S++ + G ++E R+F I++ +H
Sbjct: 473 AFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADH 532
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 163/362 (45%), Gaps = 57/362 (15%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSW-LVIHYA 137
A ++ LA+ KHF +LD I + P++ S+ + ++ YA
Sbjct: 85 AAVENLAEKKHFSAVSNLLDGF-----------------IENRPDLKSERFAAHAIVLYA 127
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
++ M +L+VF + +++ R V+ LN
Sbjct: 128 QANMLDHSLRVFRDLEKFEIS---------------------------RTVKS---LNAL 157
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEK-GVVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
++ CL+ ++D + AK++ EM + G+ PD+ TYN +I ++C+ G + SI +
Sbjct: 158 LFACLV-----AKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAE 212
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPN--HVTYTTLIDGYCKANE 314
MER+GI + S+ +I GF E + E ++ + +KD N TY I CK +
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+A + + M + G+ P TY+ ++ C + +A KL M + + D+ T
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
LI K GD ++AL + +E P K+L++G K ++E AKEL+ G +
Sbjct: 333 LIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI-GQVKEK 391
Query: 435 FT 436
FT
Sbjct: 392 FT 393
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 1/227 (0%)
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK-KVQA 367
Y +AN LD +L+V +E + V + N++L ++A ++ EM + ++
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
D T N +I + + G S+ +M G+KP+ ++ +I GF D+ + ++L
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M D G +Y+ + CK+ AL D LS G+ + Y LI C
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
+ E A+KLF M G DS Y +L Y K G A ++ +E
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKE 352
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 155/348 (44%), Gaps = 38/348 (10%)
Query: 173 KDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIF 232
+ G + +++ ++ G+ +++ +++ L+ +S + ++A L N+M + G P++
Sbjct: 224 RTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLV 283
Query: 233 TYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS-- 290
TY +LI + GM EA ++ K++ EG+ DIV N +I+ + + GR EA ++F+
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSL 343
Query: 291 EIKDATPNHVTYTTLIDGYCKANELD--------------------------------QA 318
E + P+ T+ +++ C + + D A
Sbjct: 344 EKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYA 403
Query: 319 LKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
LKV +M K TY L LC+ G R A K+ + ++K D + +I++
Sbjct: 404 LKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDS 463
Query: 379 YSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPS 438
++G +A+ + + D +Y I G + +E A L M + G P+
Sbjct: 464 LIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPN 523
Query: 439 YCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS----VYRALIR 482
+Y I+ G CK+ + + + E + +G+ LD + VY L R
Sbjct: 524 RRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSR 571
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 185/420 (44%), Gaps = 22/420 (5%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK-- 182
N++ ++ ++ K + AL++FE +R A + S + G ++V
Sbjct: 142 NTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCS---RGGRGDLVGVKI 198
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ KR++ +G N + ++ C ++ V A Q++ M G+ + ++ L+S +
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHV 300
+ G +A+ + +KM + G + ++V+Y SLI GF G + EA + S+++ P+ V
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
+I Y + ++A KV +E + L P T+ SIL LC G+ ++ + +
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI 378
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
D +T N L N +SKIG ALK + M D +TY + C+
Sbjct: 379 G---TDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAP 435
Query: 421 ESAKELLFGM------LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDA 474
+A ++ + LDA F +S I+D + + + L + + LD
Sbjct: 436 RAAIKMYKIIIKEKKHLDAHF------HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDV 489
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
Y I+ L + ++IE A L M+ GI + Y ++ K +T +L E
Sbjct: 490 VSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRE 549
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 139/306 (45%), Gaps = 5/306 (1%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
V+ V S LV + +S Q A+ +F +M P+L T L+ + G + + +
Sbjct: 245 VSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTV 304
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
++ +G+ +I + N +IH ++ E A+++ +E++ +VPD +T+ +++S C
Sbjct: 305 LSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCL 364
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVT 301
G I + G + D+V+ N L F K G A ++ S KD + T
Sbjct: 365 SGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYT 421
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
YT + C+ A+K+ +++ + + +++I+ L + G+ A L
Sbjct: 422 YTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCI 481
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
+K D ++ I + ++ A M E G+ P+ TY+ +I G CK E E
Sbjct: 482 LEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETE 541
Query: 422 SAKELL 427
+++L
Sbjct: 542 KVRKIL 547
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 133/325 (40%), Gaps = 10/325 (3%)
Query: 229 PDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRM 288
P +F L+ ++ + ++ +A+ + M G + + N ++ K + A +
Sbjct: 108 PRVFL--LLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEI 165
Query: 289 FSEIKDATPNHVTYTTLIDGYCKANELDQALKVR---ELMEAKGLYPGVATYNSILRKLC 345
F I+ N ++ + +C + V+ + M +G YP + ILR C
Sbjct: 166 FEGIR--FRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCC 223
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
+ G + +A +++ M + + L++ + + G+ + A+ NKM++ G P+
Sbjct: 224 RTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLV 283
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
TY +LI GF + ++ A +L + G P + ++ Y + + +
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSL 343
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKT 525
+ L D + +++ LC + + ++ G G D V L+ + K G
Sbjct: 344 EKRKLVPDQYTFASILSSLCLSGKFDLVPRI---THGIGTDFDLVTGNLLSNCFSKIGYN 400
Query: 526 SVASNVLEEMAKRRLIITAKIYSCF 550
S A VL M+ + + Y+ +
Sbjct: 401 SYALKVLSIMSYKDFALDCYTYTVY 425
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 158 KPHLPAC--TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERA 215
K HL A + ++ SL++ G N + KR + + L++ Y I +++ +E A
Sbjct: 449 KKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEA 508
Query: 216 KQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLD 265
L +M+E G+ P+ TY T+IS CK+ + I + +EG+ LD
Sbjct: 509 YSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 175/407 (42%), Gaps = 14/407 (3%)
Query: 121 DPEVNSQVLSWLVIHYA--KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
+P V V S+ VI A + ++ + V + M + P L T+ + S ++
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVP-DIFTYNTL 237
++ + GV + +N L+ + V AK + N +KG +P D +YN +
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIM 261
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-- 295
IS + K G E + +M G D +SY+ LI G + GR+ ++ +F IK
Sbjct: 262 ISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGN 321
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ Y +I + A + D++++ M + P + TY+ ++ L + ++ DA +
Sbjct: 322 VPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALE 381
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
+ EM + V + + G +A+ K ++G + YK L+
Sbjct: 382 IFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLS 441
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
+ + + M ++G+ Y +IVDG C +++ + + +E + KG C +
Sbjct: 442 RFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRF 501
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKS 522
VY L +L + E A KLF ++ T A ++W+S
Sbjct: 502 VYSRLSSKLMASNKTELAYKLFLKIK-------KARATENARSFWRS 541
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 159/366 (43%), Gaps = 5/366 (1%)
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHY 248
+ GV ++ Y+ ++ A + + +L M +GV PD+ + + + +HY
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVR--VHY 201
Query: 249 --EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP-NHVTYTTL 305
A+ + ++ E G+ S+N+L+ C+ + A +F+ K P + +Y +
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIM 261
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
I G+ K E+++ KV + M G P +Y+ ++ L + GRI D+ ++ + + K
Sbjct: 262 ISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGN 321
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
D N +I + D ++++ +ML+ +P+ TY L+ G K ++ A E
Sbjct: 322 VPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALE 381
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+ ML G P+ + + C A + + + G + S Y+ L++RL
Sbjct: 382 IFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLS 441
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAK 545
+ + ++ M+ +G D +Y + G A V+EE ++
Sbjct: 442 RFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRF 501
Query: 546 IYSCFS 551
+YS S
Sbjct: 502 VYSRLS 507
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 166/385 (43%), Gaps = 3/385 (0%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
+V+L +L + + + + K +V +GV ++ + + + V RA +L E E
Sbjct: 155 SVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESES 214
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
GV ++N L+ C++ H A ++ I D SYN +I G+ K G + E
Sbjct: 215 FGVKCSTESFNALLRCLCERS-HVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEE 273
Query: 285 ATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
++ E+ ++ P+ ++Y+ LI+G + ++ ++++ + ++ KG P YN+++
Sbjct: 274 MEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMIC 333
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP 402
++ + M +++ + + T + L++ K + AL+ +ML G+ P
Sbjct: 334 NFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLP 393
Query: 403 DPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALP 462
+ + C +A + AG S +Y ++ + +L +
Sbjct: 394 TTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVW 453
Query: 463 DEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKS 522
DE G D VY ++ LC I +E A + G + +Y+ L+ S
Sbjct: 454 DEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMAS 513
Query: 523 GKTSVASNVLEEMAKRRLIITAKIY 547
KT +A + ++ K R A+ +
Sbjct: 514 NKTELAYKLFLKIKKARATENARSF 538
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 125/298 (41%), Gaps = 44/298 (14%)
Query: 261 GINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD-----ATPNHVTYTTLIDGYCKANEL 315
G+ D+ SY+ ++ GR + + M +K P+ T +D + + + +
Sbjct: 146 GVTKDVGSYSVILRAL---GRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYV 202
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
+A+++ E E+ G+ ++N++LR LC+ + A + N
Sbjct: 203 RRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN----------------- 245
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
+K G++ D +Y +I G+ K+ E+E +++L M+++GF
Sbjct: 246 ----AKKGNIPF---------------DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGF 286
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEK 495
P SYS +++G + ++ + + D KG DA+VY A+I + + +
Sbjct: 287 GPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMR 346
Query: 496 LFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVP 553
+ M + Y+ L K K S A + EEM R ++ T + + F P
Sbjct: 347 YYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKP 404
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+ ++ E N + S LV K R DAL++FE+M + P T L L G
Sbjct: 352 LDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPP 411
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ I+++ + G ++ Y L+ S+ + +EM+E G D+ Y +
Sbjct: 412 HAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYI 471
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA 295
+ C G A+ + ++ R+G + Y+ L + A ++F +IK A
Sbjct: 472 VDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKA 529
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 173/362 (47%), Gaps = 10/362 (2%)
Query: 88 KHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHD---DPEVNSQVLSWLVIHYAKSRMTQD 144
+ F A+++L +A D I + + +V + + +++ Y+ + +
Sbjct: 98 RRFSYAKELLKPVAIDDILRYPFNVIVSSVIDECGCEKKVVGRFFNSMIMVYSDNGKFSE 157
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGV-VLNIYIYNCLI 203
++VFE M+ ++K CT+ L +L + + +V+ G+ V+ +Y ++
Sbjct: 158 VVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTVVV 217
Query: 204 HACSKSRDVERAKQLLNEME-EKGVVPDIFTYNTLISLYCKKGMHYEALSIQDK-MEREG 261
+ ++ RA++L+ EM KGV +I T+ ++I C K +E L + K ME+E
Sbjct: 218 TVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGC-CVKRWDFEELDLVLKLMEKES 276
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQAL 319
+ LD+ SY LI GF G++ EA R+ + D Y +++GY + +++ +
Sbjct: 277 VMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVI 336
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
++ M ++G+ P TY ++ LC+ G++ +A LNE+ + + D +TL
Sbjct: 337 ELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEEC 396
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
++G + +L+ +M+ G P + L +++ E A+ L+ ++ G P
Sbjct: 397 YRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNRKE-AQMLITIVVKCGIKPKS 455
Query: 440 CS 441
CS
Sbjct: 456 CS 457
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 138/312 (44%), Gaps = 8/312 (2%)
Query: 269 YNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELME 326
+NS+I + G+ E +F +K + + T T + + ++++ A LM
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 327 AKGL-YPGVATYNSILRKLCQDGRIRDANKLLNEMS-EKKVQADNITCNTLINAYSKIGD 384
G+ V + ++ LC +G I A +L+ EM K V+A+ +T ++I K D
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 385 LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW 444
+ M + + D +YK LI GF ++E A+ L+ M D Y+
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNL 321
Query: 445 IVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNG 504
I++GY + V+ ++ L E S+G+ + Y L+ LCK ++ A + N
Sbjct: 322 IMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE 381
Query: 505 ISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGE--NKVS 562
D +Y++L+ ++ G + V+ EM + I A I C + D E K +
Sbjct: 382 FEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATI--CERLADSLFEVNRKEA 439
Query: 563 QMFWDHVVERGL 574
QM VV+ G+
Sbjct: 440 QMLITIVVKCGI 451
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 109/234 (46%), Gaps = 6/234 (2%)
Query: 264 LDIVSYNSL---IYGFCKEGRMREATRMFSE---IKDATPNHVTYTTLIDGYCKANELDQ 317
+D+V+ SL + C G + A + E +K N VT+ ++I K + ++
Sbjct: 205 IDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEE 264
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
V +LME + + + +Y ++ G++ +A +L+ M +KK++ ++ N ++N
Sbjct: 265 LDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMN 324
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
YS+ G ++ ++ ++M G+ P+ TY L++G CK ++ A L + F
Sbjct: 325 GYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEI 384
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
YS + + + +D L + E + G A++ L L ++ + E
Sbjct: 385 DEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNRKE 438
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 151/337 (44%), Gaps = 44/337 (13%)
Query: 193 VLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
VLN+ I N LI K + A + ++ EE G P+ TY + CK+ A S
Sbjct: 228 VLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACS 287
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF----SEIKDATPNHVTYTTLIDG 308
+ +KM + G+ + ++I FCKEG+ EA ++ ++ K P V TLI
Sbjct: 288 VCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITA 345
Query: 309 YCKAN-ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
CK + + A ++ + + G+ ++ ++ LC+ ++DA LL +M K
Sbjct: 346 LCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAP 405
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD------------------------ 403
N N +++A SK GDL A + M GLKPD
Sbjct: 406 GNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEIL 465
Query: 404 -----------PFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKK 452
P TY ALI G+CK++E + A +LL M G P+ Y+ ++ +C K
Sbjct: 466 AEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLK 525
Query: 453 D-NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIE 488
+ + L +E KGL L+A + + LIR + ++E
Sbjct: 526 ALDWEKAEVLFEEMKQKGLHLNA-ISQGLIRAVKEME 561
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 138/297 (46%), Gaps = 7/297 (2%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
+N ++L+ L+ + K ++ A VF + + P+ + L +L K + +
Sbjct: 229 LNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSV 288
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQL--LNEMEEKGVVPDIFTYNTLISLY 241
+++++ GV+ +I K E A + L + +EK + P TLI+
Sbjct: 289 CEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITAL 346
Query: 242 CKK-GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPN 298
CK G A + + E I ++ +I+ C+ +++A + ++ K P
Sbjct: 347 CKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPG 406
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
+ + ++ K +LD+A +V +LME++GL P V TY I+ + G + +A ++L
Sbjct: 407 NAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILA 466
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
E +K + +T + LI Y KI + ALK N+M G++P+ Y LI FC
Sbjct: 467 EAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 100/178 (56%), Gaps = 5/178 (2%)
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
++ G ++N ++HACSK+ D++ AK++L ME +G+ PD++TY +IS Y K GM
Sbjct: 398 MISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGM 457
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTT 304
EA I + +++ L V+Y++LI G+CK EA ++ +E+ PN Y
Sbjct: 458 MDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNK 517
Query: 305 LIDGYC-KANELDQALKVRELMEAKGLYPGVATYNSI--LRKLCQDGRIRDANKLLNE 359
LI +C KA + ++A + E M+ KGL+ + I ++++ + ++ + LL E
Sbjct: 518 LIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKVTEDGNLLAE 575
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
I P + V + +V +K+ +A +V + M LKP + TV++S K G
Sbjct: 399 ISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMM 458
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+ +I + L+ Y+ LI K + + A +LLNEM+ GV P+ YN L
Sbjct: 459 DEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKL 518
Query: 238 ISLYCKKGMHYEALSIQ-DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK 293
I +C K + +E + ++M+++G++L+ +S +G +R M SE K
Sbjct: 519 IQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS----------QGLIRAVKEMESEAK 565
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 116/289 (40%), Gaps = 40/289 (13%)
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQAL 319
+NL+I+ N LI F K G+ + A +FS+ ++ TPN TY ++ CK + +D A
Sbjct: 229 LNLEIL--NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWAC 286
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
V E M G+ +I+ C++G+ +A Y
Sbjct: 287 SVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEA-------------------------Y 321
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD-ELESAKELLFGMLDAGFTPS 438
S + K K K L P LI CK D + A+E+L +
Sbjct: 322 S----VYELAKTKEKSL------PPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRG 371
Query: 439 YCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFY 498
+S ++ C+ NV AL + +SKG +V+ ++ K ++ A+++
Sbjct: 372 IKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 499 HMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
ME G+ D YT + Y K G A +L E K+ ++ Y
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTY 480
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 174/449 (38%), Gaps = 116/449 (25%)
Query: 60 FFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIH 119
FF W+E+ + H+ M +LAK FK L +++ R+ +
Sbjct: 113 FFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRE--------------N 158
Query: 120 DDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
V + ++ L+ + ++AL F +M+ Y KP
Sbjct: 159 GKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKP-------------------- 198
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGV--VPDIFTYNTL 237
++Y YN +I+A + + ++A+ LL++M+ G PD +TY L
Sbjct: 199 ---------------DVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTIL 243
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDA 295
IS YC+ GM R+ I RM EA RMF E+ +
Sbjct: 244 ISSYCRYGMQTGC--------RKAIRR----------------RMWEANRMFREMLFRGF 279
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
P+ VTY LIDG CK N + +AL++ E M+ KG P TYNS +R I A +
Sbjct: 280 VPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIE 339
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
++ M K L G+ P TY LIH
Sbjct: 340 MMRTM---------------------------------KKLGHGV-PGSSTYTPLIHALV 365
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLD-A 474
+ A++L+ M++AG P +Y + D + + + + DE L K +
Sbjct: 366 ETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL----SSEGLASTLDEELHKRMREGIQ 421
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGN 503
Y +++ + + E K F+ ++GN
Sbjct: 422 QRYSRVMKIKPTMARKEVVRKYFHKIDGN 450
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 16/223 (7%)
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
A+ +++ L ++G +++A M E + D NT+INA ++G+ K A +
Sbjct: 165 TASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLD 224
Query: 394 KMLESGLK--PDPFTYKALIHGFCKMD-----------ELESAKELLFGMLDAGFTPSYC 440
+M G + PD +TY LI +C+ + A + ML GF P
Sbjct: 225 QMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM 500
+Y+ ++DG CK + + L L ++ +KG + Y + IR +IE A ++ M
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Query: 501 E--GNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
+ G+G+ G S YT L +A ++ + + A +++ EM + L+
Sbjct: 345 KKLGHGVPGSST-YTPLIHALVETRRAAEARDLVVEMVEAGLV 386
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 183/408 (44%), Gaps = 41/408 (10%)
Query: 167 LLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKG 226
++SS +++G N + +++ GV ++ + CL+ AC ++ + L + + G
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 227 VVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREAT 286
+ + F ++LI Y + Y + + K+ + D V +N ++ G+ K G +
Sbjct: 169 MDCNEFVASSLIKAY----LEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 287 RMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL 344
+ FS ++ +PN VT+ ++ +D +++ L+ G+ + NS+L
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 345 CQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDP 404
+ GR DA+KL MS +AD +T N +I+ Y + G ++ +L F +M+ SG+ PD
Sbjct: 285 SKCGRFDDASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 405 FTYKALIHGFCKMDELESAKE---------------LLFGMLDAGFTPSYCSYSWIVDGY 449
T+ +L+ K + LE K+ L ++DA F S + +
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 450 CKKDNVDAILALPDEFLSKGLCLDA-SVYRALIR-----------RLCKIEQIECAEKLF 497
C +V A+ +L GL +D+ ++R L++ + + I A KL
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 498 YHMEG----NGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
+ G G I ++ Y K G+ ++A + E ++KR ++
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV 508
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/443 (18%), Positives = 178/443 (40%), Gaps = 25/443 (5%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
YAK ++ F MR+ Q+ P+ +LS ++ ++H +V GV
Sbjct: 214 YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
I N L+ SK + A +L M D T+N +IS Y + G+ E+L+
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRA----DTVTWNCMISGYVQSGLMEESLTFFY 329
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANEL 315
+M G+ D ++++SL+ K + ++ I + ++ +D + + +
Sbjct: 330 EMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI-------MRHSISLDIFLTSALI 382
Query: 316 DQALKVRELMEAKGLYP-----GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
D K R + A+ ++ V + +++ +G D+ ++ + + K+ + I
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
T +++ + LK + +++ G A+I + K + A E+ +
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 431 LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
S++ ++ + DN A + + + G+C D A + +
Sbjct: 503 SKRDIV----SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE 558
Query: 491 ECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLII-TAKIYSC 549
+ + M + ++ D ++L Y K G A NV + M ++ ++ + I +C
Sbjct: 559 SFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAAC 618
Query: 550 FSVPDGHGENKVSQMFWDHVVER 572
HG+ K S + +VE+
Sbjct: 619 ----GNHGKLKDSLCLFHEMVEK 637
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/276 (18%), Positives = 114/276 (41%), Gaps = 10/276 (3%)
Query: 273 IYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP 332
+Y C G + +MF + + + ++I + + L+QAL M G+ P
Sbjct: 79 MYAMC--GSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSP 136
Query: 333 GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFK 392
V+T+ +++ + + L + +S + + ++LI AY + G +
Sbjct: 137 DVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK----IDVP 192
Query: 393 NKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKK 452
+K+ + L+ D + +++G+ K L+S + M +P+ ++ ++ K
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK 252
Query: 453 DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
+D + L + G+ + S+ +L+ K + + A KLF M D+V +
Sbjct: 253 LLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS----RADTVTW 308
Query: 513 TSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
+ Y +SG + EM ++ A +S
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFS 344
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IK 293
+I +Y K G A I +++ + DIVS+NS+I + A +F + +
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKR----DIVSWNSMITRCAQSDNPSAAIDIFRQMGVS 536
Query: 294 DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
+ V+ + + + M L V + ++++ + G ++ A
Sbjct: 537 GICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA 596
Query: 354 NKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLE-SGLKPDPFTYKALIH 412
+ M EK + ++ N++I A G LK +L ++M+E SG++PD T+ +I
Sbjct: 597 MNVFKTMKEKNI----VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIIS 652
Query: 413 GFCKMDELESAKELLFGML-DAGFTPSYCSYSWIVD 447
C + +++ M D G P Y+ +VD
Sbjct: 653 SCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVD 688
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 158/341 (46%), Gaps = 19/341 (5%)
Query: 168 LSSLLKDGTTN---VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNE--- 221
L+SL+ +G N +V K K + NI +Y+ + ++ + +++L E
Sbjct: 44 LTSLV-NGERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKK 102
Query: 222 ---MEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCK 278
M ++G I ISLY K GM A + ++M ++S+N+L+ +
Sbjct: 103 YRDMSKEGFAARI------ISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRL 156
Query: 279 EGRMREATRMFSEIK---DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVA 335
+ +F+E+ P+ V+Y TLI C+ + L +A+ + + +E KGL P +
Sbjct: 157 SKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIV 216
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
T+N++L G+ ++ +M EK V D T N + + K + ++
Sbjct: 217 TFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL 276
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNV 455
SGLKPD F++ A+I G +++ A+ ++ G+ P +++ ++ CK +
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDF 336
Query: 456 DAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKL 496
++ + L E SK + + + L+ L K + E AE++
Sbjct: 337 ESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 21/280 (7%)
Query: 230 DIFTYN-TLISLYCKKGMHY--EALSIQDK---MEREGINLDIVSYNSLIYGFCKEGRMR 283
+I Y+ T+ L K +HY E L Q K M +EG I+S +YG K G
Sbjct: 73 NIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIIS----LYG--KAGMFE 126
Query: 284 EATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKV-RELMEAKGLYPGVATYNSI 340
A ++F E+ +D + +++ L+ Y + + D ++ EL + P + +YN++
Sbjct: 127 NAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 341 LRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGL 400
++ LC+ + +A LL+E+ K ++ D +T NTL+ + G + + KM+E +
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNV 246
Query: 401 KPDPFTYKALIHGFCKMDELESAKEL--LFGMLDA-GFTPSYCSYSWIVDGYCKKDNVDA 457
D TY A + G +E +S KEL LFG L A G P S++ ++ G + +D
Sbjct: 247 AIDIRTYNARLLGLA--NEAKS-KELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDE 303
Query: 458 ILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
A E + G D + + L+ +CK E A +LF
Sbjct: 304 AEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 38/260 (14%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQD-GVVL 194
Y K+ M ++A +VFE+M K + + LLS+ +VV ++ L +
Sbjct: 119 YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKP 178
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI-SLYCKK--------- 244
+I YN LI A + + A LL+E+E KG+ PDI T+NTL+ S Y K
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 245 --------------------GMHYEALSIQ-----DKMEREGINLDIVSYNSLIYGFCKE 279
G+ EA S + +++ G+ D+ S+N++I G E
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 280 GRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATY 337
G+M EA + EI P+ T+ L+ CKA + + A+++ + +K G T
Sbjct: 299 GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTL 358
Query: 338 NSILRKLCQDGRIRDANKLL 357
++ +L + + +A +++
Sbjct: 359 QQLVDELVKGSKREEAEEIV 378
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 1/239 (0%)
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK- 363
+I Y KA + A KV E M + V ++N++L + +L NE+ K
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
++ D ++ NTLI A + L A+ +++ GLKPD T+ L+ + E
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
+E+ M++ +Y+ + G + ++ L E + GL D + A+IR
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLII 542
+++ AE + + +G D + L A K+G A + +E +R ++
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLV 353
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 116/539 (21%), Positives = 212/539 (39%), Gaps = 59/539 (10%)
Query: 35 LSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQ 94
+S + + +V+ LN + S++ FF W P Y+H ++ + L+ + F
Sbjct: 45 ISPSLVARVIDPFLLNHH--SLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMD 102
Query: 95 QMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRL 154
+ ++ +I D V ++ LV+ R Q A V E+
Sbjct: 103 ALFKQV-------------KSNKILLDSSVYRSLIDTLVL----GRKAQSAFWVLEEAFS 145
Query: 155 YQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN-----IYI-YNC------- 201
+ H C LL+ L DG + K+ ++ GV LN +YI + C
Sbjct: 146 TGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQ 205
Query: 202 -----------------------LIHA-CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
++H+ C SR+++ A +L E+ PD Y +
Sbjct: 206 LLRLVDEVKKANLNINGSIIALLILHSLCKCSREMD-AFYILEELRNIDCKPDFMAYRVI 264
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT- 296
+ G YE + K + G+ Y + I R+ EA + I
Sbjct: 265 AEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKF 324
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P + G A + D A++ M + G P + T + + + LC+ + K
Sbjct: 325 PMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKA 384
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
+S K ++ + + +I+ K G ++ + +M + GL PD Y ALI CK
Sbjct: 385 YELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
+ + AK+L M G + +Y+ ++ ++ + L L D+ L +G+ D ++
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETI 504
Query: 477 YRALIRRLCKIEQIECAEKLFYH-MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
Y +LI LCK +IE A ++F ME + + + + +G + AS +L E
Sbjct: 505 YMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 161 LPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLN 220
L + ++++S L K G + + + ++G+ ++ +YN LI AC K+ + AK+L +
Sbjct: 397 LQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWD 456
Query: 221 EMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEG 280
EM +G ++ TYN LI ++G E+L + DKM GI D Y SLI G CKE
Sbjct: 457 EMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKET 516
Query: 281 RMREATRMFSEIKDATPNHVTYTTLID---GYCK---ANELDQALKVRELMEAKGLY 331
++ A +F + + VT L + C + E Q L+ RE +E G +
Sbjct: 517 KIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLREREHLEHTGAH 573
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 165/348 (47%), Gaps = 8/348 (2%)
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
+YN ++ K R E Q+ +EM ++ + TY L++ Y EA+ + ++
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERR 204
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMF-SEIKDATPNHVTYTTLIDGYCKANELD 316
+ GI+ D+V+++ L+ C+ + A +F S ++ + +++G+C +
Sbjct: 205 KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+A + + + A P V +Y +++ L + G++ A +L M + + D CN +I
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM-LDAGF 435
+A + AL+ ++ E G P+ TY +L+ CK+ E EL+ M L G
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 436 -TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC-LDASVYRALIRRLCKIEQIECA 493
+P+ ++S+++ + +VD +L E ++K C + + +Y + R + ++ E
Sbjct: 385 CSPNDVTFSYLLKYSQRSKDVDIVL----ERMAKNKCEMTSDLYNLMFRLYVQWDKEEKV 440
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
+++ ME +G+ D YT + GK A + +EM + ++
Sbjct: 441 REIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 8/284 (2%)
Query: 269 YNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELME 326
YN ++ K R E ++F E+ +D N TY L++ Y A+++D+A+ V E +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 327 AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLK 386
G+ + ++ +L LC+ + A L ++ D N ++N + +G++
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 387 SALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
A +F ++ S +PD +Y +I+ K +L A EL M D P + ++
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 447 DGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME--GNG 504
D C K + L + E KG + Y +L++ LCKI + E +L ME G
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 505 ISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYS 548
S + V ++ L +S + VLE MAK + +T+ +Y+
Sbjct: 385 CSPNDVTFSYLLKYSQRSKDVDI---VLERMAKNKCEMTSDLYN 425
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 156/363 (42%), Gaps = 27/363 (7%)
Query: 80 MIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKS 139
++ +L K + F+ Q+ D+++ RD VN + L+ YA +
Sbjct: 149 ILDVLGKMRRFEEFHQVFDEMSKRDGF-----------------VNEKTYEVLLNRYAAA 191
Query: 140 RMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH-KRLVQDGVVLNIYI 198
+A+ VFE+ + + + L A LL L + + R + G +I
Sbjct: 192 HKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC--DIKA 249
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
N +++ +V AK+ ++ PD+ +Y T+I+ KKG +A+ + M
Sbjct: 250 MNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMW 309
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELD 316
N D+ N++I C + R+ EA +F EI K PN VTY +L+ CK +
Sbjct: 310 DTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTE 369
Query: 317 QALKVRELMEAKG--LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+ ++ E ME KG P T++ +L+ R +D + +L M++ K + + N
Sbjct: 370 KVWELVEEMELKGGSCSPNDVTFSYLLK---YSQRSKDVDIVLERMAKNKCEMTSDLYNL 426
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+ Y + + + ++M SGL PD TY IHG ++ A M+ G
Sbjct: 427 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Query: 435 FTP 437
P
Sbjct: 487 MVP 489
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 132/286 (46%), Gaps = 38/286 (13%)
Query: 136 YAKSRMTQDALQVFEQMRLYQ--LKPHLPACTVLLSSLLK--DGTTNVVWKIHKRLVQDG 191
Y + D +++F+ + Q +P +LLS + D + + V ++ +V +G
Sbjct: 95 YGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNG 154
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK-KGMHYEA 250
+ + + + + ++ V+ AK L+ E+ EK PD +TYN L+ CK K +H
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH--- 211
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYC 310
++Y F E R + D P+ V++T LID C
Sbjct: 212 ---------------------VVYEFVDEMR---------DDFDVKPDLVSFTILIDNVC 241
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
+ L +A+ + + G P YN+I++ C + +A + +M E+ V+ D I
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
T NTLI SK G ++ A + M+++G +PD TY +L++G C+
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 7/269 (2%)
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPN----HVTYTTLIDGYCKANE--L 315
I LD+ +NS++ + + + ++F I + PN T+ L+ C+A + +
Sbjct: 81 IPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSI 140
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
+V LM GL P T + +R LC+ GR+ +A L+ E++EK D T N L
Sbjct: 141 SNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFL 200
Query: 376 INAYSKIGDLKSALKFKNKMLES-GLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+ K DL +F ++M + +KPD ++ LI C L A L+ + +AG
Sbjct: 201 LKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
F P Y+ I+ G+C + + + +G+ D Y LI L K ++E A
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
M G D+ YTSL + G
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANE 314
M G+ D V+ + + C+ GR+ EA + E+ K + P+ TY L+ CK +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 315 LDQALK-VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
L + V E+ + + P + ++ ++ +C +R+A L++++ + D N
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
T++ + + A+ KM E G++PD TY LI G K +E A+ L M+DA
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 434 GFTPSYCSYSWIVDGYCKK 452
G+ P +Y+ +++G C+K
Sbjct: 330 GYEPDTATYTSLMNGMCRK 348
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 119 HDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRL-YQLKPHLPACTVLLSSLLKDGTT 177
H P+ + ++L+ H K + + ++MR + +KP L + T+L+ ++
Sbjct: 189 HSPPD--TYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHA-CSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ +L G + ++YN ++ C+ S+ E A + +M+E+GV PD TYNT
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE-AVGVYKKMKEEGVEPDQITYNT 305
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEG 280
LI K G EA M G D +Y SL+ G C++G
Sbjct: 306 LIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 184/400 (46%), Gaps = 27/400 (6%)
Query: 168 LSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGV 227
L L K N V ++H ++++ + +++I LI A S R A ++ N+++E
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQE--- 79
Query: 228 VPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATR 287
P++ N+LI + + Y+A + +M+R G+ D +Y L+ + +
Sbjct: 80 -PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKM 138
Query: 288 MFSEIKDATPNHVTYT--TLIDGY--CKANELDQALKVRELMEAKGLYPGVATYNSILRK 343
M + I+ + Y LID Y C + A+K+ E M + ++NS+L
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERD----TVSWNSMLGG 194
Query: 344 LCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPD 403
L + G +RDA +L +EM ++ D I+ NT+++ Y++ ++ A + KM E +
Sbjct: 195 LVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER----N 246
Query: 404 PFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW--IVDGYCKKDNVDAILAL 461
++ ++ G+ K ++E A+ M D P+ +W I+ GY +K + L
Sbjct: 247 TVSWSTMVMGYSKAGDMEMARV----MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 462 PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWK 521
D+ ++ GL DA+ +++ + + ++ ++ + + ++ + +L Y K
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAK 362
Query: 522 SGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKV 561
G A +V ++ K+ L+ + V GHG+ +
Sbjct: 363 CGNLKKAFDVFNDIPKKDLVSWNTMLHGLGV-HGHGKEAI 401
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 165/340 (48%), Gaps = 37/340 (10%)
Query: 67 TPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNS 126
P + S + +Q L K + +Q+ +I R+ +H+D +
Sbjct: 9 APSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRN-------------LHEDLHIAP 55
Query: 127 QVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKR 186
+++S L + R T A++VF Q++ +P++ C L+ + ++ + +
Sbjct: 56 KLISALSL----CRQTNLAVRVFNQVQ----EPNVHLCNSLIRAHAQNSQPYQAFFVFSE 107
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
+ + G+ + + Y L+ ACS + K + N +E+ G+ DI+ N LI Y + G
Sbjct: 108 MQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCG- 166
Query: 247 HYEALSIQDKME--REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTT 304
L ++D M+ + D VS+NS++ G K G +R+A R+F E+ + +++ T
Sbjct: 167 ---GLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR--DLISWNT 221
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
++DGY + E+ +A ++ E M + ++++++ + G + A + ++M
Sbjct: 222 MLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMP--- 274
Query: 365 VQADNITCNTLINA-YSKIGDLKSALKFKNKMLESGLKPD 403
+ A N+ T+I A Y++ G LK A + ++M+ SGLK D
Sbjct: 275 LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFD 314
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 188/452 (41%), Gaps = 55/452 (12%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E N + + L+ +A++ A VF +M+ + L LL + VV
Sbjct: 79 EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKM 138
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACS---------------------------------KS 209
+H + + G+ +IY+ N LI S K+
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKA 198
Query: 210 RDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSY 269
++ A++L +EM ++ D+ ++NT++ Y + +A + +KM + VS+
Sbjct: 199 GELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSW 250
Query: 270 NSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKG 329
++++ G+ K G M A MF ++ N VT+T +I GY + L +A ++ + M A G
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 330 LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
L A SIL + G + ++ + + + ++ N L++ Y+K G+LK A
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
Query: 390 KFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGY 449
N + K D ++ ++HG + A EL M G P ++ ++
Sbjct: 371 DVFNDI----PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVL--- 423
Query: 450 CKKDNVDAILALPDEFLSK----GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
C ++ I D F S L Y L+ L ++ +++ A K+ M +
Sbjct: 424 CSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP---M 480
Query: 506 SGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
+ VI+ +L A + +A VL+ + K
Sbjct: 481 EPNVVIWGALLGACRMHNEVDIAKEVLDNLVK 512
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 147/325 (45%), Gaps = 17/325 (5%)
Query: 122 PEVNSQVLSWLVI--HYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
P V++W +I YA+ + ++A ++ +QM LK A +L++ + G ++
Sbjct: 274 PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSL 333
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
+IH L + + N Y+ N L+ +K ++++A + N++ +K D+ ++NT++
Sbjct: 334 GMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLH 389
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF---SEIKDAT 296
G EA+ + +M REGI D V++ +++ G + E F ++ D
Sbjct: 390 GLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLV 449
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P Y L+D + L +A+KV + M + P V + ++L + A ++
Sbjct: 450 PQVEHYGCLVDLLGRVGRLKEAIKVVQTMP---MEPNVVIWGALLGACRMHNEVDIAKEV 506
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGL-KPDPFTYKAL---IH 412
L+ + K D + L N Y+ D + ++KM G+ KP + L IH
Sbjct: 507 LDNLV-KLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIH 565
Query: 413 GFCKMDELESAKELLFGMLDAGFTP 437
F D+ + ++ ML + P
Sbjct: 566 EFTVFDKSHPKSDQIYQMLGSLIEP 590
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 188/441 (42%), Gaps = 40/441 (9%)
Query: 2 VLIENQRQFIDG-VCAIIVKGHWGNLLKVNNAP---VLSSTTIHQVLLQLSLNGYGPSIS 57
+L EN + G V A++ KG W ++ VLS + +VL +L + P +
Sbjct: 187 MLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREH---PLKA 243
Query: 58 FPFFKWVESTPH---YTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXX 114
FF WV Y HS A +++LA+ ++D++ +
Sbjct: 244 LAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIK 303
Query: 115 XXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKD 174
R + KSRM + ++++E M KP + C++LL L
Sbjct: 304 VSR-----------------QFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYL--S 344
Query: 175 GTTN----VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPD 230
G+ N +V+++ ++ G L+ +Y+ + + + + A+++ M G PD
Sbjct: 345 GSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPD 404
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
TY+ L+ CK EA + D+ME +G DI ++ LI G CK + +A F+
Sbjct: 405 NITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFA 464
Query: 291 EI--KDATPNHVTYTTLIDGYCKANELDQA-LKVRELMEAKGLYPGVATYNSILRKLCQD 347
+ K + LIDG+ N+ + A + + E+++ + P +TY ++ KL +
Sbjct: 465 NMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKI 524
Query: 348 GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
+ +A LL M ++ A +K G L+ A KF + +L S P Y
Sbjct: 525 KKSEEALDLLQMMKKQNYPA---YAEAFDGYLAKFGTLEDAKKFLD-VLSSKDSPSFAAY 580
Query: 408 KALIHGFCKMDELESAKELLF 428
+I F + L AK LLF
Sbjct: 581 FHVIEAFYREGRLTDAKNLLF 601
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 5/274 (1%)
Query: 233 TYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI 292
TYN + + + E S+ D+M+ G ++D+ +Y + F K M E +++ +
Sbjct: 265 TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYM 324
Query: 293 KDAT-PNHVTYTTLIDGYCKAN---ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
D + +L+ Y + +LD +V E+ G A Y+ I R L G
Sbjct: 325 MDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 384
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
R +A ++ M + DNIT + L+ K L+ A ++M G PD T+
Sbjct: 385 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWT 444
Query: 409 ALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD-AILALPDEFLS 467
LI G CK +EL+ A ML+ GF ++DG+ + + A + L + +
Sbjct: 445 ILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKN 504
Query: 468 KGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
+ S Y+ LI +L KI++ E A L M+
Sbjct: 505 ANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMK 538
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 149/398 (37%), Gaps = 30/398 (7%)
Query: 157 LKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERA- 215
L P P +++L L++ + W + + Q G L+ Y + SK + A
Sbjct: 119 LSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAV 178
Query: 216 ------KQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSY 269
+++L E V ++ T C+ +ERE + +V
Sbjct: 179 AVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCE-------------VERELQEMKLVLS 225
Query: 270 NSLIYGFCKEGRMR--EATRMFSEIKDATP------NHVTYTTLIDGYCKANELDQALKV 321
++ + KE R +A F + + VTY + + N + + V
Sbjct: 226 DNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSV 285
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN--AY 379
+ M+ G + TY + R+ + + + KL M + + C+ L+ +
Sbjct: 286 VDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSG 345
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
S DL + K +G Y + + + A+E+ M +AG+ P
Sbjct: 346 SPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDN 405
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+YS +V G CK ++ + D+ ++G D + LI+ CK +++ A F +
Sbjct: 406 ITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFAN 465
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
M G DS + L + K AS L EM K
Sbjct: 466 MLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVK 503
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 152/329 (46%), Gaps = 11/329 (3%)
Query: 228 VPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFC---KEGRMRE 284
+PD Y+ LIS+ KKG A+ + +M+ G D YN+LI + + E
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 285 ATRMFSE----IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSI 340
R + + I+ PN VTY L+ + ++ ++DQ + + ++ + P V T+N +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 341 LRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGL 400
+ ++G I++ +L M + + D IT N LI++Y K + + + ++ S
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 401 KPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVD--GYCKKDNVDAI 458
KP T+ ++I + K ++ A+ + M D + PS+ +Y ++ GYC +V
Sbjct: 310 KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRA 367
Query: 459 LALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
+ +E L AS A++ C+ A+KLF++ + D+ Y L A
Sbjct: 368 REIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKA 427
Query: 519 YWKSGKTSVASNVLEEMAKRRLIITAKIY 547
Y K+ ++++M K ++ + +
Sbjct: 428 YTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 137/321 (42%), Gaps = 7/321 (2%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLL-KDGTTNVVWKI 183
++ V S L+ K T+ A+ +F +M+ +P L+++ L + K+
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 184 HKRLVQ----DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
L + + N+ YN L+ A ++S V++ L +++ V PD++T+N ++
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATP 297
Y K GM E ++ +M DI+++N LI + K+ + + F + P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
T+ ++I Y KA +D+A V + M P TY ++ G + A ++
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIF 371
Query: 358 NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
E+ E T N ++ Y + G A K + + PD TYK L + K
Sbjct: 372 EEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA 431
Query: 418 DELESAKELLFGMLDAGFTPS 438
D E + L+ M G P+
Sbjct: 432 DMKEQVQILMKKMEKDGIVPN 452
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 155/334 (46%), Gaps = 11/334 (3%)
Query: 223 EEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFC---KE 279
+++ +PD Y+ LIS+ KKG A+ + +M+ G D YN+LI +
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDK 184
Query: 280 GRMREATRMFSE----IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVA 335
+ E R + + I+ PN VTY L+ + ++ ++DQ + + ++ + P V
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 336 TYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKM 395
T+N ++ ++G I++ +L M + + D IT N LI++Y K + + + +
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVD--GYCKKD 453
+ S KP T+ ++I + K ++ A+ + M D + PS+ +Y ++ GYC
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--G 362
Query: 454 NVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYT 513
+V + +E L AS A++ C+ A+KLF++ + D+ Y
Sbjct: 363 SVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYK 422
Query: 514 SLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
L AY K+ ++++M K ++ + +
Sbjct: 423 FLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 137/321 (42%), Gaps = 7/321 (2%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLL-KDGTTNVVWKI 183
++ V S L+ K T+ A+ +F +M+ +P L+++ L + K+
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 184 HKRLVQ----DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
L + + N+ YN L+ A ++S V++ L +++ V PD++T+N ++
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATP 297
Y K GM E ++ +M DI+++N LI + K+ + + F + P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
T+ ++I Y KA +D+A V + M P TY ++ G + A ++
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIF 371
Query: 358 NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
E+ E T N ++ Y + G A K + + PD TYK L + K
Sbjct: 372 EEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA 431
Query: 418 DELESAKELLFGMLDAGFTPS 438
D E + L+ M G P+
Sbjct: 432 DMKEQVQILMKKMEKDGIVPN 452
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 167/359 (46%), Gaps = 18/359 (5%)
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
K++ ++ G++ N Y + ++ +C+KS+ + +Q+ + + G D++ + +LIS+Y
Sbjct: 120 KLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMY 179
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVT 301
+ G +A + DK D+VSY +LI G+ G + A ++F EI + V+
Sbjct: 180 VQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLFDEI--PVKDVVS 233
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
+ +I GY + +AL++ + M + P +T +++ Q G I ++ +
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
+ ++ N LI+ YSK G+L++A + E D ++ LI G+ M+ +
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETAC----GLFERLPYKDVISWNTLIGGYTHMNLYK 349
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDA---ILALPDEFLSKGLCLDASVYR 478
A L ML +G TP+ + I+ +D I D+ L KG+ +S+
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL-KGVTNASSLRT 408
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
+LI K IE A ++F + +S + ++ + + G+ + ++ M K
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSS----WNAMIFGFAMHGRADASFDLFSRMRK 463
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 176/406 (43%), Gaps = 20/406 (4%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+A S AL+++ M L P+ +L S K +IH +++ G L+
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+Y++ LI ++ +E A ++ ++ + D+ +Y LI Y +G A + D
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLFD 224
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKAN 313
++ + D+VS+N++I G+ + G +EA +F ++ + P+ T T++ ++
Sbjct: 225 EIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
++ +V ++ G + N+++ + G + A L + K V I+ N
Sbjct: 281 SIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV----ISWN 336
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK--ELLFGML 431
TLI Y+ + K AL +ML SG P+ T +++ + ++ + +
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
G T + + ++D Y K +++A + + L K L S + A+I + +
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL----SSWNAMIFGFAMHGRAD 452
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
+ LF M GI D + + L A SG + ++ M +
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 156/350 (44%), Gaps = 16/350 (4%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
N+ I+N + + S D A +L M G++P+ +T+ ++ K E I
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNH--VTYTTLIDGYCKA 312
+ + G +LD+ + SLI + + GR+ +A ++F D +P+ V+YT LI GY
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF----DKSPHRDVVSYTALIKGYASR 213
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
++ A K+ + + K V ++N+++ + G ++A +L +M + V+ D T
Sbjct: 214 GYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
T+++A ++ G ++ + + + G + ALI + K ELE+A G+ +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA----CGLFE 325
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
S++ ++ GY + L L E L G + +++ + I+
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Query: 493 AEKLFYHMEG--NGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
+ +++ G++ S + TSL Y K G A V + + L
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 111/257 (43%), Gaps = 10/257 (3%)
Query: 285 ATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL 344
A +F I++ PN + + T+ G+ +++ ALK+ M + GL P T+ +L+
Sbjct: 87 AISVFKTIQE--PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 144
Query: 345 CQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDP 404
+ ++ ++ + + D +LI+ Y + G L+ A +K+ + D
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA----HKVFDKSPHRDV 200
Query: 405 FTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDE 464
+Y ALI G+ +E+A++L D S++ ++ GY + N L L +
Sbjct: 201 VSYTALIKGYASRGYIENAQKL----FDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 465 FLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGK 524
+ + D S ++ + IE ++ ++ +G + I +L Y K G+
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 525 TSVASNVLEEMAKRRLI 541
A + E + + +I
Sbjct: 317 LETACGLFERLPYKDVI 333
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 148/328 (45%), Gaps = 6/328 (1%)
Query: 148 VFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI--HKRLVQDGVVLNIYIYNCLIHA 205
+FE M LKP + T L+S K + + + + V D +++ + LI
Sbjct: 166 LFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSD-CKPDVFTFTVLISC 224
Query: 206 CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL- 264
C K + K ++ EM GV TYNT+I Y K GM E S+ M +G +L
Sbjct: 225 CCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLP 284
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVTYTTLIDGYCKANELDQALKVR 322
D+ + NS+I + MR+ +S ++ P+ T+ LI + KA + V
Sbjct: 285 DVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVM 344
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
+ ME + TYN ++ + GRI + + +M + V+ ++IT +L+NAYSK
Sbjct: 345 DFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKA 404
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSY 442
G + +++ S + D + +I+ + + +L + KEL M + P ++
Sbjct: 405 GLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITF 464
Query: 443 SWIVDGYCKKDNVDAILALPDEFLSKGL 470
+ ++ Y DA+ L + +S +
Sbjct: 465 ATMIKTYTAHGIFDAVQELEKQMISSDI 492
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 14/261 (5%)
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEA-KGLYPGVATYNSILRKLCQDGRIRDANK 355
P YT+LI Y K+ LD+A E M++ P V T+ ++ C+ GR
Sbjct: 177 PTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKS 236
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK-PDPFTYKALIHGF 414
++ EMS V +T NT+I+ Y K G + M+E G PD T ++I +
Sbjct: 237 IVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSY 296
Query: 415 C------KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSK 468
KM+ S +L+ G P +++ ++ + K + ++ D +
Sbjct: 297 GNGRNMRKMESWYSRFQLM------GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKR 350
Query: 469 GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
L Y +I K +IE + +F M+ G+ +S+ Y SL AY K+G
Sbjct: 351 FFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKI 410
Query: 529 SNVLEEMAKRRLIITAKIYSC 549
+VL ++ +++ ++C
Sbjct: 411 DSVLRQIVNSDVVLDTPFFNC 431
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+ K+ + VF +M+ +KP+ L+++ K G + + +++V VVL+
Sbjct: 366 FGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLD 425
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+NC+I+A ++ D+ K+L +MEE+ PD T+ T+I Y G+ ++A+
Sbjct: 426 TPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGI-FDAV---Q 481
Query: 256 KMEREGINLDI 266
++E++ I+ DI
Sbjct: 482 ELEKQMISSDI 492
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 157/354 (44%), Gaps = 12/354 (3%)
Query: 142 TQDALQVFEQMRLYQLKPHLPAC---TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYI 198
+QD +RL Q C T L+SS K G + ++++ ++ GV N++
Sbjct: 480 SQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHT 539
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
+ LI C+++ V +A + K V PD +N LIS + G A + +M+
Sbjct: 540 FGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMK 599
Query: 259 REG--INLDIVSYNSLIYGFCKEGRMREATRMFSEIKD----ATPNHVTYTTLIDGYCKA 312
E I+ D +S +L+ C G++ A ++ I TP YT ++ K+
Sbjct: 600 AETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPE--VYTIAVNSCSKS 657
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
+ D A + + M+ K + P +++++ + +A +L + + ++ I+
Sbjct: 658 GDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISY 717
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
++L+ A D K AL+ K+ L+P T ALI C+ ++L A E L +
Sbjct: 718 SSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKT 777
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
G P+ +YS ++ +KD+ + L + G+ + + R I LCK
Sbjct: 778 LGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC-ITSLCK 830
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 158/351 (45%), Gaps = 10/351 (2%)
Query: 192 VVLN--IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
++LN + +N L+ C+ S+D+E A+ +L ++E G+ D Y TLIS K G
Sbjct: 461 LILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDA 520
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLID 307
+ +M G+ ++ ++ +LI G + G++ +A + + K+ P+ V + LI
Sbjct: 521 MFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALIS 580
Query: 308 GYCKANELDQALKVRELMEAKG--LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
++ +D+A V M+A+ + P + ++++ C G++ A ++ + + +
Sbjct: 581 ACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGI 640
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH--GFCKMDELESA 423
+ +N+ SK GD A M E + PD + ALI G KM L+ A
Sbjct: 641 RGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKM--LDEA 698
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
+L G SYS ++ C + L L ++ S L S ALI
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITA 758
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
LC+ Q+ A + ++ G+ +++ Y+ L A + V+ +L +
Sbjct: 759 LCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQ 809
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 143/326 (43%), Gaps = 5/326 (1%)
Query: 186 RLVQD-GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
RLVQ+ G+ + +Y LI +C+KS V+ ++ ++M GV ++ T+ LI +
Sbjct: 491 RLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARA 550
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT----PNHV 300
G +A + + + D V +N+LI + G + A + +E+K T P+H+
Sbjct: 551 GQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHI 610
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
+ L+ C A ++++A +V +++ G+ Y + + G A + +M
Sbjct: 611 SIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDM 670
Query: 361 SEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDEL 420
EK V D + + LI+ L A G++ +Y +L+ C +
Sbjct: 671 KEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDW 730
Query: 421 ESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+ A EL + P+ + + ++ C+ + + + DE + GL + Y L
Sbjct: 731 KKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSML 790
Query: 481 IRRLCKIEQIECAEKLFYHMEGNGIS 506
+ + + E + KL +G+G+S
Sbjct: 791 MLASERKDDFEVSFKLLSQAKGDGVS 816
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 158/375 (42%), Gaps = 22/375 (5%)
Query: 133 VIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGV 192
V H M Q + FE L+ P + + LL+DG + + L Q +
Sbjct: 375 VGHQIDESMPQFPARNFE---LHNSNGRSPETSDAYNRLLRDGRIKDCISLLEDLDQRDL 431
Query: 193 VLNIYIYNC-LIHACSKSRDVERA----KQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
+ IY+ AC K R V+ A K +LN P + T+N L+S+ C
Sbjct: 432 LDMDKIYHASFFKACKKQRAVKEAFRFTKLILN--------PTMSTFNMLMSV-CASSQD 482
Query: 248 YE-ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTT 304
E A + ++ G+ D Y +LI K G++ +F ++ ++ N T+
Sbjct: 483 IEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGA 542
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK- 363
LIDG +A ++ +A ++ +K + P +N+++ Q G + A +L EM +
Sbjct: 543 LIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAET 602
Query: 364 -KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
+ D+I+ L+ A G ++ A + + + G++ P Y ++ K + +
Sbjct: 603 HPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDF 662
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
A + M + TP +S ++D +D + + S+G+ L Y +L+
Sbjct: 663 ACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMG 722
Query: 483 RLCKIEQIECAEKLF 497
C + + A +L+
Sbjct: 723 ACCNAKDWKKALELY 737
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 307 DGYCKANELDQAL-----KVRELMEAKGLYPGVA-TYNSILRKLCQDGRIRDANKLLNEM 360
DG +++D+++ + EL + G P + YN +LR DGRI+D LL ++
Sbjct: 371 DGKHVGHQIDESMPQFPARNFELHNSNGRSPETSDAYNRLLR----DGRIKDCISLLEDL 426
Query: 361 SEKKV-QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
++ + D I + A K +K A +F K++ L P T+ L+ +
Sbjct: 427 DQRDLLDMDKIYHASFFKACKKQRAVKEAFRF-TKLI---LNPTMSTFNMLMSVCASSQD 482
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
+E A+ +L + ++G T Y+ ++ K VDA+ + + + G+ + + A
Sbjct: 483 IEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGA 542
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
LI + Q+ A + + + D V++ +L A +SG A +VL EM
Sbjct: 543 LIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEM 598
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 132/307 (42%), Gaps = 37/307 (12%)
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGR-MREATRMFSEIKDATPNHVTYTTLIDGYCK 311
++D +R+ +++D + Y++ + CK+ R ++EA R I + P T+ L+
Sbjct: 423 LEDLDQRDLLDMDKI-YHASFFKACKKQRAVKEAFRFTKLILN--PTMSTFNMLMSVCAS 479
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
+ +++ A V L++ G+ Y +++ + G++ ++ ++MS V+A+ T
Sbjct: 480 SQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHT 539
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
LI+ ++ G + A + +KPD + ALI + ++ A ++L M
Sbjct: 540 FGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEM- 598
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
+ +D PD +S G AL++ C Q+E
Sbjct: 599 -----------------KAETHPID-----PDH-ISIG---------ALMKACCNAGQVE 626
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFS 551
A++++ + GI G +YT + KSG A ++ ++M ++ + +S
Sbjct: 627 RAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Query: 552 VPDGHGE 558
GH +
Sbjct: 687 DVAGHAK 693
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 222 MEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGR 281
M E + D YN +I CK G EA +I + G+ D+ +YN +I F GR
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGR 63
Query: 282 MREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNS 339
A ++++E+ + P+ +TY ++I G CK N+L QA KV + +T+N+
Sbjct: 64 ---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFNT 111
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
++ C+ R++D L EM + + A+ IT TLI+ + ++GD +AL +M+ +G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLF 428
+ T++ ++ C EL A +L
Sbjct: 172 VYSSSITFRDILPQLCSRKELRKAVAMLL 200
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 17/226 (7%)
Query: 148 VFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACS 207
+F+ MR + +++ L K G + I L+ G+ ++ YN +I S
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 208 KSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIV 267
+ RA++L EM +G+VPD TYN++I CK+ +A +
Sbjct: 61 ----LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS--------- 107
Query: 268 SYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELM 325
++N+LI G+CK R+++ +F E+ + N +TYTTLI G+ + + + AL + + M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 326 EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
+ G+Y T+ IL +LC +R A +L + + + ++N+T
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML--LQKSSMVSNNVT 211
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 15/207 (7%)
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTYTTLIDGYCKANE 314
M +++D YN +I+G CK G+ EA +F+ I P+ TY +I + +
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
L +A K+ M +GL P TYNS++ LC+ ++ A +KV T NT
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNT 111
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
LIN Y K +K + +M G+ + TY LIHGF ++ + +A ++ M+ G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILAL 461
S ++ I+ C + + +A+
Sbjct: 172 VYSSSITFRDILPQLCSRKELRKAVAM 198
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 13/190 (6%)
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
++M + A YN I+ LC+ G+ +A + + +Q D T N +I +
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RF 58
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSY 442
L A K +M+ GL PD TY ++IHG CK ++L A+++ + S ++
Sbjct: 59 SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTF 109
Query: 443 SWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEG 502
+ +++GYCK V + L E +G+ + Y LI ++ A +F M
Sbjct: 110 NTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVS 169
Query: 503 NGISGDSVIY 512
NG+ S+ +
Sbjct: 170 NGVYSSSITF 179
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 288 MFSEIKDATPNHVT--YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
MF ++++ + T Y +I G CKA + D+A + + GL P V TYN ++R
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
GR A KL EM + + D IT N++I+ K L A K +
Sbjct: 60 SLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCS 107
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
T+ LI+G+CK ++ L M G + +Y+ ++ G+ + + + L + E
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECA 493
+S G+ + +R ++ +LC +++ A
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKA 195
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
M E + D N +I+ K G A +L SGL+PD TY +I +
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
L A++L M+ G P +Y+ ++ G CK++ + ++ + S +
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQ---------ARKVSKSCSTFNT 111
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
LI CK +++ LF M GI + + YT+L + + + G + A ++ +EM
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 132 LVIH-YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLL--SSLLKDGTTNVVWKIHKRLV 188
++IH K+ +A +F + + L+P + +++ SSL + K++ ++
Sbjct: 19 IIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGR------AEKLYAEMI 72
Query: 189 QDGVVLNIYIYNCLIHACSKSRDVERAKQ--------------------------LLNEM 222
+ G+V + YN +IH K + +A++ L EM
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEM 132
Query: 223 EEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRM 282
+G+V ++ TY TLI + + G AL I +M G+ +++ ++ C +
Sbjct: 133 YRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKEL 192
Query: 283 REATRMFSEIKDATPNHVT 301
R+A M + N+VT
Sbjct: 193 RKAVAMLLQKSSMVSNNVT 211
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 192/466 (41%), Gaps = 63/466 (13%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSW--LVIHY 136
MI + F+ A+++ D++ RD ++SW ++ Y
Sbjct: 100 GMISGYLRNGEFELARKLFDEMPERD-----------------------LVSWNVMIKGY 136
Query: 137 AKSRMTQDALQVFEQMRLYQLKPHLPACT--VLLSSLLKDGTTNVVWKIHKRLVQDGVVL 194
++R A ++FE M P C+ +LS ++G + + R+ +
Sbjct: 137 VRNRNLGKARELFEIM------PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK---- 186
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
N +N L+ A ++ +E A L E +V ++N L+ + KK EA
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVEARQFF 242
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANE 314
D M D+VS+N++I G+ + G++ EA ++F E + T+T ++ GY +
Sbjct: 243 DSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDE--SPVQDVFTWTAMVSGYIQNRM 296
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+++A ++ + M + ++N++L Q R+ A +L + M + V T NT
Sbjct: 297 VEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNT 348
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+I Y++ G + A +KM K DP ++ A+I G+ + A L M G
Sbjct: 349 MITGYAQCGKISEAKNLFDKM----PKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
+ S+S + ++ L + G V AL+ CK IE A
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
LF M G D V + ++ Y + G VA E M + L
Sbjct: 465 DLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGL 506
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 162/355 (45%), Gaps = 48/355 (13%)
Query: 125 NSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
N ++SW L+ + K + +A Q F+ M + + + +++ + G +
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEA-- 269
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKG---------------- 226
++L + V +++ + ++ ++R VE A++L ++M E+
Sbjct: 270 --RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGER 327
Query: 227 ---------VVP--DIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYG 275
V+P ++ T+NT+I+ Y + G EA ++ DKM + D VS+ ++I G
Sbjct: 328 MEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAG 383
Query: 276 FCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPG 333
+ + G EA R+F +++ N ++++ + L+ ++ + G G
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
N++L C+ G I +AN L EM+ K D ++ NT+I YS+ G + AL+F
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFE 499
Query: 394 KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML-DAGFTPSYCSYSWIVD 447
M GLKPD T A++ ++ ++ + M D G P+ Y+ +VD
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 180/396 (45%), Gaps = 49/396 (12%)
Query: 151 QMRLYQLKPHLPAC-------TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
Q++ Q KP L V +SS ++ G N ++ KR+ + V YN +I
Sbjct: 47 QIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV----SYNGMI 102
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
++ + E A++L +EM E+ D+ ++N +I Y + +A + + M
Sbjct: 103 SGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPER--- 155
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRE 323
D+ S+N+++ G+ + G + +A +F + + N V++ L+ Y + +++++A + +
Sbjct: 156 -DVCSWNTMLSGYAQNGCVDDARSVFDRMPE--KNDVSWNALLSAYVQNSKMEEACMLFK 212
Query: 324 LMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
E L ++N +L + +I +A + + M+ + V ++ NT+I Y++ G
Sbjct: 213 SRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSG 264
Query: 384 DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYS 443
+ A ++ + D FT+ A++ G+ + +E A+EL M P S
Sbjct: 265 KIDEA----RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM------PERNEVS 314
Query: 444 W--IVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
W ++ GY + + ++ + E C + S + +I + +I A+ LF M
Sbjct: 315 WNAMLAGYVQGERME----MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 502 GNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
D V + ++ Y +SG + A + +M +
Sbjct: 371 KR----DPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 158/354 (44%), Gaps = 54/354 (15%)
Query: 230 DIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF 289
DI +N IS Y + G EAL + +M R VSYN +I G+ + G A ++F
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPR----WSSVSYNGMISGYLRNGEFELARKLF 118
Query: 290 SEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGR 349
E+ + + V++ +I GY + L +A ++ E+M + V ++N++L Q+G
Sbjct: 119 DEMPER--DLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGC 172
Query: 350 IRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKA 409
+ DA + + M EK ++++ N L++AY + ++ A + +S ++
Sbjct: 173 VDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEAC----MLFKSRENWALVSWNC 224
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKG 469
L+ GF K ++ A++ D+ S++ I+ GY + +D L DE
Sbjct: 225 LLGGFVKKKKIVEARQF----FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----S 276
Query: 470 LCLDASVYRALIRRLCKIEQIECAEKLFYHM-EGNGISGDSVI----------------- 511
D + A++ + +E A +LF M E N +S ++++
Sbjct: 277 PVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFD 336
Query: 512 ---------YTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGH 556
+ ++ Y + GK S A N+ ++M KR + A + + +S GH
Sbjct: 337 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS-QSGH 389
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 141/301 (46%), Gaps = 10/301 (3%)
Query: 129 LSWLVIHYAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
S +V Y K+ ++A V E M + P + +L K + + ++ R+
Sbjct: 596 FSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRI 655
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
+ G+ N +YNC+I+ C+++ ++ EM G P+ T+N L+ +Y K +
Sbjct: 656 RKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLF 715
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVT-----Y 302
+ + +R G+ +D++SYN++I + G+ ++ T M S IK+ + + Y
Sbjct: 716 KKVNELFLLAKRHGV-VDVISYNTIIAAY---GKNKDYTNMSSAIKNMQFDGFSVSLEAY 771
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
TL+D Y K ++++ + + M+ P TYN ++ + G I + +L E+ E
Sbjct: 772 NTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKE 831
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
+ D + NTLI AY G ++ A+ +M + PD TY L+ + DE
Sbjct: 832 SGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLE 891
Query: 423 A 423
A
Sbjct: 892 A 892
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 173/406 (42%), Gaps = 8/406 (1%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQM--RLYQLKPHLPACTVLLSSLLKDG 175
H+ +N S LV+ Y K M D L + + R + HL +L+ S + G
Sbjct: 480 FHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHL--YHLLICSCKESG 537
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
KI+ ++ +N++I + +I + + A++L ++ GVV D ++
Sbjct: 538 QLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFS 597
Query: 236 TLISLYCKKGMHYEALSIQDKM-EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD 294
++ +Y K G EA S+ + M E++ I D+ + ++ + K + ++ I+
Sbjct: 598 IVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRK 657
Query: 295 ATP--NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
+ N Y +I+ +A LD+ E M G P T+N +L + +
Sbjct: 658 SGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKK 717
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
N+L ++++ D I+ NT+I AY K D + M G Y L+
Sbjct: 718 VNELF-LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLD 776
Query: 413 GFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL 472
+ K ++E + +L M + P + +Y+ +++ Y ++ +D + + E GL
Sbjct: 777 AYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGP 836
Query: 473 DASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
D Y LI+ +E A L M G I D V YT+L A
Sbjct: 837 DLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTA 882
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 178/393 (45%), Gaps = 14/393 (3%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
D S + L+ +S DA++++ + +L + ++ G +
Sbjct: 518 DSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEA 577
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEM-EEKGVVPDIFTYNTLIS 239
K++ L GVVL+ ++ ++ K+ +E A +L M E+K +VPD++ + ++
Sbjct: 578 EKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLR 637
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATP 297
+Y K + + + ++ + GI+ + YN +I + + E + F E+ TP
Sbjct: 638 IYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTP 697
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
N VT+ L+D Y KA + ++ L + G+ V +YN+I+ G+ +D +
Sbjct: 698 NTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVD-VISYNTIIAAY---GKNKDYTNMS 753
Query: 358 NEMSEKKVQADNITC-----NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
+ + K +Q D + NTL++AY K ++ +M +S PD +TY +I+
Sbjct: 754 SAI--KNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811
Query: 413 GFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL 472
+ + ++ ++L + ++G P CSY+ ++ Y V+ + L E + +
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIP 871
Query: 473 DASVYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
D Y L+ L + ++ A K M+ GI
Sbjct: 872 DKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 151/353 (42%), Gaps = 41/353 (11%)
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
++N +I+AC+K +V+ A + + M E GV P++ T L+ LY K EA M
Sbjct: 212 VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHM 271
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQ 317
+ GI C+ Y+++I Y + D+
Sbjct: 272 RKFGI-------------VCESA---------------------YSSMITIYTRLRLYDK 297
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
A +V +LM+ + + + +L Q G++ A +L M + I NTLI
Sbjct: 298 AEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLIT 357
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
Y KI +++A +++ GL+PD +Y+++I G+ + D E AK + G+ P
Sbjct: 358 GYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKP 417
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR---RLCKIEQIECAE 494
+ + +++ K + D + ++ G C +S+ +++ ++ KI+ + C
Sbjct: 418 NSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG-CQYSSILGIILQAYEKVGKIDVVPCVL 476
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
K +H N I + ++SL AY K G +L E R + +Y
Sbjct: 477 KGSFH---NHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLY 526
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 177/415 (42%), Gaps = 12/415 (2%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S ++ Y + R+ A +V + M+ +++ L V+L++ + G + I +
Sbjct: 283 SSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEA 342
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
G NI YN LI K +E A+ L + + G+ PD +Y ++I + + + E
Sbjct: 343 AGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEE 402
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTT----L 305
A +++R G + + +LI K G A + I+D T Y++ +
Sbjct: 403 AKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKT---IEDMTGIGCQYSSILGII 459
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
+ Y K ++D V + + +++S++ + G + D LL E +
Sbjct: 460 LQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDS 519
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
++ + LI + + G L A+K N +ES + + +I + M E A++
Sbjct: 520 AFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEK 579
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD---AILALPDEFLSKGLCLDASVYRALIR 482
L + +G +S +V Y K +++ ++L + DE K + D ++R ++R
Sbjct: 580 LYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE--QKDIVPDVYLFRDMLR 637
Query: 483 RLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
K + + + L+Y + +GI + +Y + ++ S EEM +
Sbjct: 638 IYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIR 692
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 2/263 (0%)
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
+ YN + + + + RA ++L M + G P ++N +++L + E I
Sbjct: 133 FFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVS 192
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANE 314
+ G+ +D N LI G C+ G + A ++ E + + PN +T++ LI G+C +
Sbjct: 193 APKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGK 252
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
++A K+ E ME + + P T+N ++ L + GR+ + LL M K + + T
Sbjct: 253 FEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQE 312
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
++ A + ++M+ G++P +YK ++ G C+ + +L M++ G
Sbjct: 313 VLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHG 372
Query: 435 FTPSYCSYSWIVDGYCKKDNVDA 457
F P + +V K+N D+
Sbjct: 373 FVPKTLMWWKVVQCVVSKNNDDS 395
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A+++ M + P + +L+ L+ + + KI + GV ++ N LI
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
+S ++E A QLL+E ++ P++ T++ LI +C KG EA + ++ME+E I
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVTYTTLIDGYCKANELDQALKVR 322
D +++N LI G K+GR+ E + ++K PN TY ++ G +A ++
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMM 330
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
M + G+ P +Y ++ LC+ + + + +L +M
Sbjct: 331 SQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQM 368
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 98/225 (43%)
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
A +++A+++ M G +P ++N IL L + +K+ + V+ D
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
N LI + G+L++AL+ ++ + +P+ T+ LI GFC + E A +LL M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
P +++ ++ G KK V+ + L + KG + Y+ ++ L ++
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
A+++ M G+ + Y + ++ VL +M
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMV 369
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 72/156 (46%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E+++ L+ L+ +S + ALQ+ ++ + +P++ + L+ G +K
Sbjct: 199 EIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFK 258
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ +R+ ++ + + +N LI K VE LL M+ KG P+ TY ++
Sbjct: 259 LLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLL 318
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCK 278
K + EA + +M G+ +SY ++ G C+
Sbjct: 319 DKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCE 354
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/509 (20%), Positives = 187/509 (36%), Gaps = 67/509 (13%)
Query: 60 FFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIH 119
F+W +S Y ++ M++IL K ++ Q + D++ + ++
Sbjct: 173 IFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVY 232
Query: 120 DDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
+ L WL +K M D + +++Y+
Sbjct: 233 SKGGLKVHALCWLG-KMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKK--------- 282
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
W + V L+ Y YN +I KS ++ A + M E+G+VP T+NT+I
Sbjct: 283 -WSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIH 341
Query: 240 LYCKKGMHYEALSIQ----------------------------------DKMEREGINLD 265
+Y G E S+ +M+ +G+ D
Sbjct: 342 IYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPD 401
Query: 266 IVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQA----- 318
VSY +L+Y F + EA + +E+ D + T + L Y +A L+++
Sbjct: 402 PVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFK 461
Query: 319 -LKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL---NEMSEKKVQADNITCNT 374
V M ++G + Y + G + +A ++ E++++ V I N
Sbjct: 462 RFHVAGNMSSEGYSANIDAYG-------ERGYLSEAERVFICCQEVNKRTV----IEYNV 510
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+I AY + A + M+ G+ PD TY L+ D + L M + G
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
+ Y ++ + K ++ + E + + D VY LI ++ A
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
M+ GI G+SVIY SL Y K G
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVG 659
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 145/296 (48%), Gaps = 9/296 (3%)
Query: 123 EVNSQVL---SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
EVN + + + ++ Y S+ + A ++FE M Y + P L+ L +
Sbjct: 499 EVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
+++ + G V + Y +I + K + A+++ EM E + PD+ Y LI+
Sbjct: 559 GRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLIN 618
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI-----KD 294
+ G +A+S + M+ GI + V YNSLI + K G + EA ++ ++ K
Sbjct: 619 AFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKT 678
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
P+ T +I+ Y + + + +A + + M+ +G T+ +L ++GR +A
Sbjct: 679 QYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEAT 737
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
++ +M E K+ D ++ N+++ ++ G K A++ +M+ SG++PD T+K+L
Sbjct: 738 QIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 135/269 (50%), Gaps = 11/269 (4%)
Query: 161 LPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLN 220
+P C V+ SS +K G N+ +++K +V+ + ++ +Y LI+A + + +V++A +
Sbjct: 576 IPYCAVI-SSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVE 634
Query: 221 EMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL---DIVSYNSLIYGFC 277
M+E G+ + YN+LI LY K G EA +I K+ + D+ + N +I +
Sbjct: 635 AMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYS 694
Query: 278 KEGRMREATRMFSEIKD-ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVAT 336
+ +R+A +F +K N T+ ++ Y K ++A ++ + M + +
Sbjct: 695 ERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLS 754
Query: 337 YNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK----FK 392
YNS+L DGR ++A + EM +Q D+ T +L K+G K A++ +
Sbjct: 755 YNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIR 814
Query: 393 NKMLESGLKPDPFTYKALIH-GFCKMDEL 420
K ++ GL+ T +L+ G C +DEL
Sbjct: 815 KKEIKRGLELWISTLSSLVGIGDC-VDEL 842
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 6/261 (2%)
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++ + ++ GV + YN L+ + + + + L +M E G V D Y +IS +
Sbjct: 526 ELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSF 585
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNH 299
K G A + +M I D+V Y LI F G +++A +K+A N
Sbjct: 586 VKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNS 645
Query: 300 VTYTTLIDGYCKANELDQALKV-RELMEA--KGLYPGVATYNSILRKLCQDGRIRDANKL 356
V Y +LI Y K LD+A + R+L+++ K YP V T N ++ + +R A +
Sbjct: 646 VIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAI 705
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
+ M ++ +A+ T ++ Y K G + A + +M E + DP +Y +++ F
Sbjct: 706 FDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFAL 764
Query: 417 MDELESAKELLFGMLDAGFTP 437
+ A E M+ +G P
Sbjct: 765 DGRFKEAVETFKEMVSSGIQP 785
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 138/345 (40%), Gaps = 37/345 (10%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
YN +I A S+ E+A +L M GV PD TYNTL+ + M ++ +KM
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQA 318
G D + Y ++I F K G +L+ A
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLG---------------------------------QLNMA 594
Query: 319 LKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
+V + M + P V Y ++ G ++ A + M E + +++ N+LI
Sbjct: 595 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKL 654
Query: 379 YSKIGDLKSALKFKNKMLESGLK---PDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
Y+K+G L A K+L+S K PD +T +I+ + + + A+ + M G
Sbjct: 655 YTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE 714
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEK 495
+ +++ ++ Y K + + + + D Y +++ + + A +
Sbjct: 715 ANEF-TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVE 773
Query: 496 LFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
F M +GI D + SL K G + A +EE+ K+ +
Sbjct: 774 TFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 204/446 (45%), Gaps = 35/446 (7%)
Query: 117 RIHDDPEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKD 174
++ D+ V V SW L+ Y K + A+ V++ M +KP L+SS
Sbjct: 212 KVFDESPVRDLV-SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSML 270
Query: 175 GTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTY 234
G N + ++ + ++G+ + I + N L+ SK D+ A+++ + +E++ +V ++
Sbjct: 271 GDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV----SW 326
Query: 235 NTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK- 293
T+IS Y + G+ + + D ME + D+V +N++I G + R ++A +F E++
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQT 382
Query: 294 -DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
+ P+ +T + + LD + + +E L VA S++ + G I +
Sbjct: 383 SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
A + + + + +++T +I + GD +A+ + N+M+++G+ PD T+ L+
Sbjct: 443 ALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLS 498
Query: 413 GFCKMDELESAKELLFGMLDAGF--TPSYCSYSWIVDGYCKKDNVDAILALPDEFL-SKG 469
C +++ ++ F + + F P YS +VD + +L D + S
Sbjct: 499 ACCHGGMIQTGRD-YFSQMKSRFNLNPQLKHYSIMVDLLGRA----GLLEEADRLMESMP 553
Query: 470 LCLDASVYRALI---RRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTS 526
+ DA+V+ AL+ R +E E A K ++ DS IY L Y ++
Sbjct: 554 MEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD----PSDSGIYVLLDGMYGEANMWE 609
Query: 527 VASNVLEEMAKRRLIITAKIYSCFSV 552
A M +R + KI C S+
Sbjct: 610 DAKRARRMMNERGV---EKIPGCSSI 632
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+++ + V ++ +NCLI+ K + E+A + ME +GV PD T L+S
Sbjct: 211 RKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSML 270
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTT 304
G + ++ G+ + I N+L+ F K G + EA R+F ++ T V++TT
Sbjct: 271 GDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI--VSWTT 328
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
+I GY + LD + K+ + ME K V +N+++ Q R +DA L EM
Sbjct: 329 MISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
+ D IT ++A S++G L + + + L + +L+ + K + A
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEAL 444
Query: 425 ELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRL 484
+ G+ T + +Y+ I+ G + ++ +E + G+ D + L+
Sbjct: 445 SVFHGIQ----TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC 500
Query: 485 CKIEQIECAEKLFYHME 501
C I+ F M+
Sbjct: 501 CHGGMIQTGRDYFSQMK 517
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 77/131 (58%)
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P +TY ++IDG+CK + +D A ++ + M +KG P V T+++++ C+ R+ + ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
EM + + A+ +T TLI+ + ++GDL +A N+M+ G+ PD T+ ++ G C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 417 MDELESAKELL 427
EL A +L
Sbjct: 128 KKELRKAFAIL 138
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 77/136 (56%)
Query: 330 LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
++P TYNS++ C+ R+ DA ++L+ M+ K D +T +TLIN Y K + + +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 390 KFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGY 449
+ +M G+ + TY LIHGFC++ +L++A++LL M+ G P Y ++ ++ G
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 450 CKKDNVDAILALPDEF 465
C K + A+ ++
Sbjct: 126 CSKKELRKAFAILEDL 141
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 74/135 (54%), Gaps = 2/135 (1%)
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANE 314
M R I ++YNS+I GFCK+ R+ +A RM + K +P+ VT++TLI+GYCKA
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+D +++ M +G+ TY +++ CQ G + A LLNEM V D IT +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 375 LINAYSKIGDLKSAL 389
++ +L+ A
Sbjct: 121 MLAGLCSKKELRKAF 135
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
Query: 227 VVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREAT 286
+ P TYN++I +CK+ +A + D M +G + D+V++++LI G+CK R+
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 287 RMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL 344
+F E+ + N VTYTTLI G+C+ +LD A + M + G+ P T++ +L L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 345 CQDGRIRDANKLLNEMSEKK 364
C +R A +L ++ + +
Sbjct: 126 CSKKELRKAFAILEDLQKSE 145
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
YN +I K V+ AK++L+ M KG PD+ T++TLI+ YCK + I +M
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELD 316
R GI + V+Y +LI+GFC+ G + A + +E+ P+++T+ ++ G C EL
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 317 QALKVRELME 326
+A + E ++
Sbjct: 133 KAFAILEDLQ 142
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 395 MLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDN 454
ML + P TY ++I GFCK D ++ AK +L M G +P ++S +++GYCK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 455 VDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTS 514
VD + + E +G+ + Y LI C++ ++ A+ L M G++ D + +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 515 LAYAYWKSGKTSVASNVLEEMAK 537
+ + A +LE++ K
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 63/122 (51%)
Query: 369 NITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLF 428
IT N++I+ + K + A + + M G PD T+ LI+G+CK +++ E+
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 429 GMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIE 488
M G + +Y+ ++ G+C+ ++DA L +E +S G+ D + ++ LC +
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
Query: 489 QI 490
++
Sbjct: 130 EL 131
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 61/114 (53%)
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
+ G ++ ++ LI+ K++ V+ ++ EM +G+V + TY TLI +C+ G
Sbjct: 36 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 95
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHV 300
A + ++M G+ D ++++ ++ G C + +R+A + +++ + +H+
Sbjct: 96 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHHL 149
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK----DGTTNVVWKIHKRL 187
++ + K DA ++ + M P + + L++ K D + ++H+R
Sbjct: 16 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR- 74
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
G+V N Y LIH + D++ A+ LLNEM GV PD T++ +++ C K
Sbjct: 75 ---GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 248 YEALSIQDKMER 259
+A +I + +++
Sbjct: 132 RKAFAILEDLQK 143
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 147/309 (47%), Gaps = 18/309 (5%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
YA + T A++ F+ M ++ P+ A LL +L + G + K + ++ +
Sbjct: 199 YAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGH---IEKAEEFMLASKKLFP 255
Query: 196 IYI--YNCLIHA-CSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
+ + +N +++ C+ DV AK++ EM + P+ +Y+ +IS + K G +++L
Sbjct: 256 VDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLR 315
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYC 310
+ D+M++ G+ I YNSL+Y +E EA ++ ++ + P+ VTY ++I C
Sbjct: 316 LYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLC 375
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
+A +LD A V M ++ L P V T+++ L + + K L + + K+
Sbjct: 376 EAGKLDVARNVLATMISENLSPTVDTFHAFLEAV-------NFEKTLEVLGQMKISDLGP 428
Query: 371 TCNTLINAYSKIGDLK---SALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
T T + K+ K +ALK +M + +P Y A I G LE A+E+
Sbjct: 429 TEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIY 488
Query: 428 FGMLDAGFT 436
M GF
Sbjct: 489 SEMKSKGFV 497
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 144/308 (46%), Gaps = 8/308 (2%)
Query: 207 SKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDI 266
+ + D +A + + M++ P + L+ C+ G H E ++ +D+
Sbjct: 200 AAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHG-HIEKAEEFMLASKKLFPVDV 258
Query: 267 VSYNSLIYGFCK-EGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRE 323
+N ++ G+C + EA R++ E+ + TPN +Y+ +I + K L +L++ +
Sbjct: 259 EGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYD 318
Query: 324 LMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIG 383
M+ +GL PG+ YNS++ L ++ +A KL+ +++E+ ++ D++T N++I + G
Sbjct: 319 EMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAG 378
Query: 384 DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYS 443
L A M+ L P T+ H F + E E+L M + P+ ++
Sbjct: 379 KLDVARNVLATMISENLSPTVDTF----HAFLEAVNFEKTLEVLGQMKISDLGPTEETFL 434
Query: 444 WIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGN 503
I+ K + L + E + + ++Y A I+ L +E A +++ M+
Sbjct: 435 LILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSK 494
Query: 504 GISGDSVI 511
G G+ ++
Sbjct: 495 GFVGNPML 502
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 6/214 (2%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y+ +I SK ++ + +L +EM+++G+ P I YN+L+ + ++ EA+ + K+
Sbjct: 297 YSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLN 356
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELD 316
EG+ D V+YNS+I C+ G++ A + + + ++ +P T+ ++ A +
Sbjct: 357 EEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLE----AVNFE 412
Query: 317 QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLI 376
+ L+V M+ L P T+ IL KL + + +A K+ EM ++ A+ I
Sbjct: 413 KTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATI 472
Query: 377 NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
G L+ A + ++M G +P K L
Sbjct: 473 QGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLL 506
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 37/247 (14%)
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
++D Y AN+ QA++ ++M+ P + +L LC+ G I A + + ++ KK
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM-DELESA 423
+ D + +++G+C + ++ A
Sbjct: 253 L----------------------------------FPVDVEGFNVILNGWCNIWTDVTEA 278
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
K + M + TP+ SYS ++ + K N+ L L DE +GL VY +L+
Sbjct: 279 KRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYV 338
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIIT 543
L + + + A KL + G+ DSV Y S+ ++GK VA NVL M L T
Sbjct: 339 LTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPT 398
Query: 544 AKIYSCF 550
+ F
Sbjct: 399 VDTFHAF 405
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 183/413 (44%), Gaps = 33/413 (7%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
LV Y K R DA +VF++M ++ + T++ L + V + L D
Sbjct: 248 LVAMYLKFRRPTDARRVFDEM---DVRDSVSYNTMICGYLKLEMVEESVRMFLENL--DQ 302
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
++ + ++ AC RD+ AK + N M + G V + N LI +Y K G A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTYTTLIDGY 309
+ + ME + D VS+NS+I G+ + G + EA ++F I + +H+TY LI
Sbjct: 363 DVFNSMECK----DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 310 CKANELDQALKVRELMEAKGLYPGV----ATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
+ +L K + + + G+ G+ + N+++ + G + D+ K+ + M
Sbjct: 419 TRLADL----KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG---- 470
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
D +T NT+I+A + GD + L+ +M +S + PD T+ + + KE
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCK---KDNVDAILALPDEFLSKGLCLDASVYRALIR 482
+ +L G+ + +++ Y K +N + E +S+ D + +I
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVF----ERMSR---RDVVTWTGMIY 583
Query: 483 RLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ E A + F ME +GI DSV++ ++ YA SG E+M
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 148/327 (45%), Gaps = 24/327 (7%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTV-----LLSSLLKDGTTNVVWKIHKR 186
L+ Y+ R +L VF ++ PA V ++ + K+G + + +
Sbjct: 45 LIDKYSHFREPASSLSVFRRVS--------PAKNVYLWNSIIRAFSKNGLFPEALEFYGK 96
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
L + V + Y + +I AC+ D E + ++ + G D+F N L+ +Y + G+
Sbjct: 97 LRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGL 156
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTT 304
A + D+M D+VS+NSLI G+ G EA ++ E+K++ P+ T ++
Sbjct: 157 LTRARQVFDEMPVR----DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSS 212
Query: 305 LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKK 364
++ + + Q + G+ V N ++ + R DA ++ +EM +
Sbjct: 213 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR- 271
Query: 365 VQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK 424
D+++ NT+I Y K+ ++ +++ + L+ KPD T +++ + +L AK
Sbjct: 272 ---DSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAK 327
Query: 425 ELLFGMLDAGFTPSYCSYSWIVDGYCK 451
+ ML AGF + ++D Y K
Sbjct: 328 YIYNYMLKAGFVLESTVRNILIDVYAK 354
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/454 (20%), Positives = 186/454 (40%), Gaps = 90/454 (19%)
Query: 117 RIHDDPEVNSQV-LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
R+ D+ +V V + ++ Y K M ++++++F + L Q KP L + +L +
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLR 321
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
++ I+ +++ G VL + N LI +K D+ A+ + N ME K D ++N
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK----DTVSWN 377
Query: 236 TLISLYCKKGMHYEALSIQDKME-----------------------------------RE 260
++IS Y + G EA+ + M +
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS 437
Query: 261 GINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALK 320
GI +D+ N+LI + K G + ++ ++FS + T + VT+ T+I + + L+
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVGDSLKIFSSM--GTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 321 VRELMEAKGLYPGVATY-----------------------------------NSILRKLC 345
V M + P +AT+ N+++
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
+ G + +++++ MS + V +T +I AY G+ + AL+ M +SG+ PD
Sbjct: 556 KCGCLENSSRVFERMSRRDV----VTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFT--PSYCSYSWIVDGYCKKDNVDAILALPD 463
+ A+I+ C L F + + P Y+ +VD + + +
Sbjct: 612 VFIAIIYA-CSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK----AE 666
Query: 464 EFL-SKGLCLDASVYRALIRRLCKIEQIECAEKL 496
EF+ + + DAS++ +++R +E AE++
Sbjct: 667 EFIQAMPIKPDASIWASVLRACRTSGDMETAERV 700
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 115/603 (19%), Positives = 230/603 (38%), Gaps = 133/603 (22%)
Query: 56 ISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXX 115
+S PF S+ + L+ A++ L + +++DK +H F
Sbjct: 5 VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSH--FREPASSLSVF 62
Query: 116 XRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPH-------LPACTVLL 168
R+ P N + + ++ ++K+ + +AL+ + ++R ++ P + AC L
Sbjct: 63 RRV--SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120
Query: 169 SSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKG-- 226
+ + D ++++++ G ++++ N L+ S+ + RA+Q+ +EM +
Sbjct: 121 DAEMGD-------LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLV 173
Query: 227 -----------------------------VVPDIFTYNT--------------------- 236
+VPD FT ++
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFA 233
Query: 237 --------------LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRM 282
L+++Y K +A + D+M+ D VSYN++I G+ K +
Sbjct: 234 LKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR----DSVSYNTMICGYLKLEMV 289
Query: 283 REATRMFSEIKDA-TPNHVTYTT-----------------------------------LI 306
E+ RMF E D P+ +T ++ LI
Sbjct: 290 EESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILI 349
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
D Y K ++ A V ME K ++NSI+ Q G + +A KL M + Q
Sbjct: 350 DVYAKCGDMITARDVFNSMECKD----TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
AD+IT LI+ +++ DLK + ++SG+ D ALI + K E+ + +
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK- 464
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
+F + G T +++ ++ + + L + + + D + + +
Sbjct: 465 IFSSMGTGDT---VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCAS 521
Query: 487 IEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLII-TAK 545
+ +++ + G + I +L Y K G +S V E M++R ++ T
Sbjct: 522 LAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGM 581
Query: 546 IYS 548
IY+
Sbjct: 582 IYA 584
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 12/222 (5%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
LQV QMR ++ P + V L + +IH L++ G + I N LI
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
SK +E + ++ M + D+ T+ +I Y G +AL ME+ GI
Sbjct: 553 MYSKCGCLENSSRVFERMSRR----DVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGY-CKANELDQALKV-- 321
D V + ++IY G + E F ++K H +I+ Y C + L ++ K+
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMK----THYKIDPMIEHYACVVDLLSRSQKISK 664
Query: 322 -RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
E ++A + P + + S+LR G + A ++ + E
Sbjct: 665 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIE 706
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 160/377 (42%), Gaps = 15/377 (3%)
Query: 168 LSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGV 227
L SL K N ++ + + + GV ++ Y Y CL AC + R + + L + M
Sbjct: 55 LVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIE 114
Query: 228 VPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATR 287
P + N ++ +YC+ +L DK+ E L+ VS ++I + ++G + +A
Sbjct: 115 NPSVLLQNCVLQMYCE----CRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVG 170
Query: 288 MFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC 345
+FS + P YTTL+ LD ++ + GL + I+
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV 230
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
+ G + A ++ ++M+ KK + C L+ Y++ G + ALK ++ G++ D F
Sbjct: 231 KCGWLVGAKRVFDQMAVKK----PVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSF 286
Query: 406 TYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF 465
+ ++ ++EL K++ + G + +VD Y K + ++ E
Sbjct: 287 VFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI 346
Query: 466 LSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGIS-GDSVIYTSLAYAYWKSGK 524
D S + A+I C++ Q E A K F + S +S YTS+ A
Sbjct: 347 REPN---DVS-WSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD 402
Query: 525 TSVASNVLEEMAKRRLI 541
++ V + KR LI
Sbjct: 403 CNIGGQVHADAIKRSLI 419
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 145/339 (42%), Gaps = 16/339 (4%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N+ + + +V Y K A +VF+QM + KP ACT L+ + G K+
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVK--KP--VACTGLMVGYTQAGRARDALKLF 273
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
LV +GV + ++++ ++ AC+ ++ KQ+ + + G+ ++ L+ Y K
Sbjct: 274 VDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKC 333
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP---NHVT 301
A ++ + VS++++I G+C+ + EA + F ++ N T
Sbjct: 334 SSFESACRAFQEIREP----NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFT 389
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
YT++ + + +V + L ++++ + G + DAN++ M
Sbjct: 390 YTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD 449
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
D + I+ ++ G+ AL+ KM+ G+KP+ T+ A++ +E
Sbjct: 450 ----NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVE 505
Query: 422 SAKELLFGMLDA-GFTPSYCSYSWIVDGYCKKDNVDAIL 459
K L ML P+ Y ++D Y + +D L
Sbjct: 506 QGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 544
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 9/203 (4%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S L+ Y+K DA +VFE M P + A T +S G + ++ +++V
Sbjct: 426 SALITMYSKCGCLDDANEVFESMD----NPDIVAWTAFISGHAYYGNASEALRLFEKMVS 481
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEK-GVVPDIFTYNTLISLYCKKGMHY 248
G+ N + ++ ACS + VE+ K L+ M K V P I Y+ +I +Y + G+
Sbjct: 482 CGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVT-YTTLID 307
EAL M E D +S+ + G + E++ P Y +
Sbjct: 542 EALKFMKNMPFEP---DAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFN 598
Query: 308 GYCKANELDQALKVRELMEAKGL 330
Y A + ++A ++ +LM + L
Sbjct: 599 LYTWAGKWEEAAEMMKLMNERML 621
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 14/343 (4%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
N ++ N LI +++ E + + M GV PD T+ ++ K G + ++
Sbjct: 90 NPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALH 149
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNH--VTYTTLIDGYCKA 312
+ ++ D SL+ + K G+++ A ++F E D + + LI+GYC+A
Sbjct: 150 AATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRA 209
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
++ A + M + +++++++ G + A +L M EK V ++
Sbjct: 210 KDMHMATTLFRSMPERN----SGSWSTLIKGYVDSGELNRAKQLFELMPEKNV----VSW 261
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
TLIN +S+ GD ++A+ +MLE GLKP+ +T A++ K L S + +LD
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
G + +VD Y K +D + K D + A+I+ +
Sbjct: 322 NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQ 377
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
A + F M +G D V++ ++ A S + + N + M
Sbjct: 378 AIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM 420
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 170/420 (40%), Gaps = 65/420 (15%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
LV YAK+ + A QVFE+ P +I K
Sbjct: 167 LVDMYAKTGQLKHAFQVFEE------SPD---------------------RIKKE----- 194
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
+I I+N LI+ +++D+ A L M E+ + +++TLI Y G A
Sbjct: 195 ---SILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAK 247
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGY 309
+ + M + ++VS+ +LI GF + G A + E+ K PN T ++
Sbjct: 248 QLFELMPEK----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
K+ L +++ + G+ A +++ + G + A + + M+ K D
Sbjct: 304 SKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK----DI 359
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
++ +I ++ G A++ +M+ SG KPD + A++ E++
Sbjct: 360 LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDS 419
Query: 430 M-LDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEF-LSKGLCLDASVYRALIRRLCKI 487
M LD P+ Y +VD + ++ L + ++ L A++YRA CK
Sbjct: 420 MRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRA-----CK- 473
Query: 488 EQIECAEKLFYHMEGNGISGDSV-IYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKI 546
A K + E +S + + + L +Y KT + ++++ KRRL + +I
Sbjct: 474 -----AHKGYRRAE--SVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRI 526
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 137/344 (39%), Gaps = 22/344 (6%)
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
LIHAC +D + + ++ +GV+ + K Y ++ ER
Sbjct: 35 LIHAC---KDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNP 91
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKAN--ELDQ 317
L N+LI G + R + R F + P+ +T+ ++ K L +
Sbjct: 92 FVL-----NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGR 146
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
AL L V S++ + G+++ A ++ E ++ + + N LIN
Sbjct: 147 ALHAATLKNFVDCDSFVRL--SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
Y + D+ A M E + ++ LI G+ EL AK+L M +
Sbjct: 205 GYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV- 259
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
S++ +++G+ + + + ++ E L KGL + A++ K + ++
Sbjct: 260 ---SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIH 316
Query: 498 YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
++ NGI D I T+L Y K G+ A+ V M + ++
Sbjct: 317 GYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDIL 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 101/226 (44%), Gaps = 14/226 (6%)
Query: 122 PEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
PE N V+SW L+ ++++ + A+ + +M LKP+ +LS+ K G
Sbjct: 254 PEKN--VVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGS 311
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
+IH ++ +G+ L+ I L+ +K +++ A + + M K DI ++ +I
Sbjct: 312 GIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQ 367
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK---DAT 296
+ G ++A+ +M G D V + +++ + F ++
Sbjct: 368 GWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIE 427
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
P Y ++D +A +L++A EL+E + P + T+ ++ R
Sbjct: 428 PTLKHYVLVVDLLGRAGKLNEA---HELVENMPINPDLTTWAALYR 470
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 185/430 (43%), Gaps = 41/430 (9%)
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
RIH E N + LS + ++ + AL++F+ MR L+P+ AC LS LL++G
Sbjct: 98 RIHFLEERNEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGD 157
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEME---EKGVVPDIFT 233
+ + + + + V + Y+ ++ A ++ + E A ++ E+E ++ D+
Sbjct: 158 IQKAFTVFEFMRKKENVTG-HTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVL 216
Query: 234 YNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI- 292
YNT ISL + YE I M+ +G ++Y+ L+ F + GR A ++ E+
Sbjct: 217 YNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMV 276
Query: 293 --KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
K + Y +I K + D ALK+ + M KG+ P + N+++ L + G++
Sbjct: 277 NNKISLREDAMY-AMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKV 335
Query: 351 RDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP-DPFTYKA 409
K+ + + + D T N L+ A K + L+ + + L + + Y
Sbjct: 336 GLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNT 395
Query: 410 LIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKG 469
+ K+ E A +LL+ M +G T S SY+ ++ C+K + L E +++
Sbjct: 396 AMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISA-CEKSRKSKVALLVYEHMAQR 454
Query: 470 LCL-------------------------------DASVYRALIRRLCKIEQIECAEKLFY 498
C D S+Y A I +C + + A++L+
Sbjct: 455 DCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYV 514
Query: 499 HMEGNGISGD 508
M G+ D
Sbjct: 515 KMREMGLEPD 524
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 149/338 (44%), Gaps = 7/338 (2%)
Query: 207 SKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDI 266
S+ V A +L + M G+ P+ N+ +S + G +A ++ + M R+ N+
Sbjct: 118 SRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFM-RKKENVTG 176
Query: 267 VSYNSLIYGFCKEGRMREATRMFSEIKDATPNH-----VTYTTLIDGYCKANELDQALKV 321
+Y+ ++ + A RMF E++ V Y T I + N + + ++
Sbjct: 177 HTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERI 236
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
+M+ G TY+ ++ + GR A + +EM K+ +I+A +K
Sbjct: 237 WRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTK 296
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
ALK ML+ G+KP+ LI+ K ++ ++ + G P +
Sbjct: 297 EEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYT 356
Query: 442 YSWIVDGYCKKDNVDAILALPDEFLSKGL-CLDASVYRALIRRLCKIEQIECAEKLFYHM 500
++ ++ K + + +L L D S+ L CL+ +Y + K+ E A KL Y M
Sbjct: 357 WNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEM 416
Query: 501 EGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
EG+G++ + Y + A KS K+ VA V E MA+R
Sbjct: 417 EGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQR 454
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 170/385 (44%), Gaps = 38/385 (9%)
Query: 58 FPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHR-------DFXXXXX 110
F F + E+ +T+SL M++ +A+ K ++A +M ++ D
Sbjct: 165 FEFMRKKENVTGHTYSL-----MLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNT 219
Query: 111 XXXXXXRIHD-------------DPEVNSQVL-SWLVIHYAKSRMTQDALQVFEQMRLYQ 156
RI++ D + +++ S LV + + ++ AL V+++M +
Sbjct: 220 AISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNK 279
Query: 157 LKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAK 216
+ A ++S+ K+ ++ KI + +++ G+ N+ N LI++ K+ V
Sbjct: 280 ISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVF 339
Query: 217 QLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI-NLDIVSYNSLIYG 275
++ + ++ G PD +T+N L++ K + + L + D + E + L+ YN+ +
Sbjct: 340 KVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVS 399
Query: 276 FCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPG 333
K G +A ++ E++ + T + +Y +I K+ + AL V E M + P
Sbjct: 400 CQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPN 459
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSE--KKVQADNITCNTLINAYSKIGDLKSALKF 391
TY S++R C G + D E+ + KKV+ D N I+ + K A +
Sbjct: 460 TFTYLSLVRS-CIWGSLWD------EVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKEL 512
Query: 392 KNKMLESGLKPDPFTYKALIHGFCK 416
KM E GL+PD T ++ K
Sbjct: 513 YVKMREMGLEPDGKTRAMMLQNLKK 537
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 135/316 (42%), Gaps = 38/316 (12%)
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ +YN + KS+D+E++++L +EM E+G+ PD T+ T+IS + G+ A+ +
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKAN 313
KM G D V+ ++I + + G + A ++ + + VT++TLI Y +
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
D L + E M+A G+ P + YN ++ + + R A + ++ + T
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLK-------------------------------- 401
L+ AY + AL +M E GL
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNC 414
Query: 402 ----PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDA 457
PD +T+ +LI + + A+ L M +AGF P+ + ++ Y K VD
Sbjct: 415 ETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDD 474
Query: 458 ILALPDEFLSKGLCLD 473
++ D+ L G+ D
Sbjct: 475 VVRTFDQVLELGITPD 490
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 156/351 (44%), Gaps = 10/351 (2%)
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
+F + +++L L + + +E + +++ YN + F K + ++ ++F
Sbjct: 140 LFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFD 199
Query: 291 EI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
E+ + P++ T+TT+I + +A++ E M + G P T +++ + G
Sbjct: 200 EMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAG 259
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
+ A L + +K + D +T +TLI Y G+ L +M G+KP+ Y
Sbjct: 260 NVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYN 319
Query: 409 ALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSK 468
LI + AK + ++ GFTP++ +Y+ +V Y + D LA+ E K
Sbjct: 320 RLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEK 379
Query: 469 GLCLDASVYRALIRRLCKIEQIECAEKLFYHMEG-NGISGDSVIYTSLAYAYWKSGKTSV 527
GL L +Y L+ ++ A ++F M+ DS ++SL Y SG+ S
Sbjct: 380 GLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSE 439
Query: 528 ASNVLEEMAKRRLIITAKIYSCFSVPDGHGENK----VSQMFWDHVVERGL 574
A L +M R ++ SV +G+ K V + F D V+E G+
Sbjct: 440 AEAALLQM--REAGFEPTLFVLTSVIQCYGKAKQVDDVVRTF-DQVLELGI 487
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK- 182
+++ S L+ Y S L ++E+M+ +KP+L L+ S+ G W+
Sbjct: 278 IDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSM---GRAKRPWQA 334
Query: 183 --IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
I+K L+ +G N Y L+ A ++R + A + EM+EKG+ + YNTL+S+
Sbjct: 335 KIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSM 394
Query: 241 YCKKGMHYEALSI-QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TP 297
EA I QD E + D +++SLI + GR+ EA ++++A P
Sbjct: 395 CADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP 332
T++I Y KA ++D ++ + + G+ P
Sbjct: 455 TLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A++ FE+M + +P ++ + + G ++ ++ R + ++ ++ LI
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
S + + + EM+ GV P++ YN LI + ++A
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQA-------------- 334
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVREL 324
I+ + + GF TPN TY L+ Y +A D AL +
Sbjct: 335 KIIYKDLITNGF-------------------TPNWSTYAALVRAYGRARYGDDALAIYRE 375
Query: 325 MEAKGLYPGVATYNSILRKLCQDGR-IRDANKLLNEMSE-KKVQADNITCNTLINAYSKI 382
M+ KGL V YN++L +C D R + +A ++ +M + D+ T ++LI Y+
Sbjct: 376 MKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACS 434
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
G + A +M E+G +P F ++I + K +++ +L+ G TP
Sbjct: 435 GRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 146/341 (42%), Gaps = 28/341 (8%)
Query: 32 APVLSSTTIHQVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFK 91
+P+ S T + +++ S P ++ F + P++ HS +I L + ++F
Sbjct: 46 SPIGSPTRVQKLIASQS----DPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFN 101
Query: 92 TAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQ 151
+L K HR + ++ ++L+ YA++++ + L F +
Sbjct: 102 LIDDVLAK--HRSSGY---------------PLTGEIFTYLIKVYAEAKLPEKVLSTFYK 144
Query: 152 MRLYQLKPHLPACTVLLSSLLKD-GTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSR 210
M + P +L L+ G +++ K GV+ N YN L+ A +
Sbjct: 145 MLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND 204
Query: 211 DVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYN 270
D+ A QL +M E+ VVPD+ +Y LI +C+KG A+ + D M +N V
Sbjct: 205 DLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDM----LNKGFVPDR 260
Query: 271 SLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAK 328
+LI G C +G E + E+ K +P+ L+ G+C ++++A V E++
Sbjct: 261 TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 320
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
G T+ ++ +C + L + ++++ D
Sbjct: 321 GETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDT 361
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 14/217 (6%)
Query: 287 RMFSEIKDATPNHVT---------YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATY 337
R F+ I D H + +T LI Y +A ++ L M P
Sbjct: 98 RYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHL 157
Query: 338 NSILRKLC-QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML 396
N IL L G ++ A +L V + + N L+ A+ DL A + KML
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 397 ESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
E + PD +YK LI GFC+ ++ A ELL ML+ GF P ++ G C + D
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRT----LIGGLCDQGMFD 273
Query: 457 AILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
+E +SKG SV L++ C ++E A
Sbjct: 274 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 4/183 (2%)
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSA 388
G+ P +YN +++ C + + A +L +M E+ V D + LI + + G + A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 389 LKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
++ + ML G PD + LI G C + K+ L M+ GF+P + + +V G
Sbjct: 245 MELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 300
Query: 449 YCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGD 508
+C V+ + + + G L + + +I +C ++ E + I+GD
Sbjct: 301 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 360
Query: 509 SVI 511
+ I
Sbjct: 361 TRI 363
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 383 GDLKSALK-FKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
G L+ A + FK+ L G+ P+ +Y L+ FC D+L A +L ML+ P S
Sbjct: 169 GYLQKAFELFKSSRLH-GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 442 YSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
Y ++ G+C+K V+ + L D+ L+KG D R LI LC + +K M
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMI 283
Query: 502 GNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
G S + L + GK A +V+E + K
Sbjct: 284 SKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 319
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 142/302 (47%), Gaps = 9/302 (2%)
Query: 194 LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
+N+ ++ C+++ + A +L + E V D YN +I L+ KG A +
Sbjct: 128 VNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADML 187
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCK 311
+M+ G+ D+++Y S+I G+C G++ +A R+ E+ D N VTY+ +++G CK
Sbjct: 188 IKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 312 ANELDQALKVRELMEAKG----LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
+ ++++AL++ ME + + P TY +++ C+ R+ +A +L+ M +
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 368 DNITCNTLINA-YSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
+ +T LI D+K+ K +K+++ G + + +M E A+++
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKI 367
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL--CLDASVYRALIRRL 484
ML G P + S + C + L E K + +D+ ++ L+ L
Sbjct: 368 FRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGL 427
Query: 485 CK 486
C+
Sbjct: 428 CQ 429
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 122/249 (48%), Gaps = 14/249 (5%)
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
+W + ++ + V + YN +I + D+ A L+ EM+ G+ PD+ TY ++I+
Sbjct: 150 LW-VLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMIN 208
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA---- 295
YC G +A + +M + L+ V+Y+ ++ G CK G M A + +E++
Sbjct: 209 GYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGG 268
Query: 296 --TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
+PN VTYT +I +C+ +++AL V + M +G P T +++ + ++ +
Sbjct: 269 LISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLEND---ED 325
Query: 354 NKLLNEMSEKKVQADNITCNTLINAYS----KIGDLKSALKFKNKMLESGLKPDPFTYKA 409
K L+++ +K V+ ++ + ++ + ++ + A K ML G++PD
Sbjct: 326 VKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSH 385
Query: 410 LIHGFCKMD 418
+ C ++
Sbjct: 386 VFRELCLLE 394
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 34/284 (11%)
Query: 230 DIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF 289
++ T +++L + + EAL + K + D V+YN +I F +G + A +
Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 290 SEIK--DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD 347
E+ P+ +TYT++I+GYC A ++D A ++ + M TY+ IL +C+
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKS 248
Query: 348 GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
G + A +LL EM ++ G L + P+ TY
Sbjct: 249 GDMERALELLAEMEKEDG-----------------GGL--------------ISPNAVTY 277
Query: 408 KALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKD-NVDAILALPDEFL 466
+I FC+ +E A +L M + G P+ + ++ G + D +V A+ L D+ +
Sbjct: 278 TLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLV 337
Query: 467 SKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSV 510
G + + + L ++++ E AEK+F M G+ D +
Sbjct: 338 KLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGL 381
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 15/266 (5%)
Query: 148 VFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACS 207
+ ++M L P + T +++ G + W++ K + + VLN Y+ ++
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 208 KSRDVERAKQLLNEMEEKG----VVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
KS D+ERA +LL EME++ + P+ TY +I +C+K EAL + D+M G
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEIKD------ATPNHVTYTTLIDGYCKANELDQ 317
+ V+ LI G + E + S++ D +++ + ++
Sbjct: 307 PNRVTACVLIQGVLEND---EDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEE 363
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA--DNITCNTL 375
A K+ LM +G+ P + + R+LC R D L E+ +K V++ D+ L
Sbjct: 364 AEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVL 423
Query: 376 INAYSKIGDLKSALKFKNKMLESGLK 401
+ + G+ A K ML+ ++
Sbjct: 424 LLGLCQQGNSWEAAKLAKSMLDKKMR 449
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 138/319 (43%), Gaps = 11/319 (3%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
VN + + ++ ++ + +AL V + + + A +++ G N+ +
Sbjct: 128 VNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADML 187
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
K + G+ ++ Y +I+ + ++ A +L EM + V + TY+ ++ CK
Sbjct: 188 IKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 244 KGMHYEALSIQDKMEREG----INLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATP 297
G AL + +ME+E I+ + V+Y +I FC++ R+ EA + + + P
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 298 NHVTYTTLIDGYCKANELDQALK--VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
N VT LI G + +E +AL + +L++ G+ ++S L + R +A K
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLS-ECFSSATVSLIRMKRWEEAEK 366
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP--DPFTYKALIHG 413
+ M + V+ D + C+ + + ++ + +K D + L+ G
Sbjct: 367 IFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLG 426
Query: 414 FCKMDELESAKELLFGMLD 432
C+ A +L MLD
Sbjct: 427 LCQQGNSWEAAKLAKSMLD 445
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 149/334 (44%), Gaps = 17/334 (5%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
++ SR + ++ V+ QM + L P L+ S + + +H +V+ G+ +
Sbjct: 83 FSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWD 142
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
++I N LIH RD A++L +EM K +V T+N+++ Y K G A + D
Sbjct: 143 LFICNTLIHMYGSFRDQASARKLFDEMPHKNLV----TWNSILDAYAKSGDVVSARLVFD 198
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE---IKDATPNHVTYTTLIDGYCKA 312
+M D+V+++S+I G+ K G +A +F + + + N VT ++I
Sbjct: 199 EMSER----DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
L++ V + L V S++ + G I DA + S K + D +
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK--ETDALMW 312
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
N +I + G ++ +L+ +KM ES + PD T+ L+ ++ A + +
Sbjct: 313 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKE 372
Query: 433 AGFTPSYCSYSWIVDGYCK----KDNVDAILALP 462
+G P Y+ +VD + KD D I +P
Sbjct: 373 SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP 406
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 143/328 (43%), Gaps = 39/328 (11%)
Query: 80 MIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSW--LVIHYA 137
+I + ++ +A+++ D++ H++ +++W ++ YA
Sbjct: 149 LIHMYGSFRDQASARKLFDEMPHKN-----------------------LVTWNSILDAYA 185
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVV-LNI 196
KS A VF++M + + + ++ +K G N +I ++++ G N
Sbjct: 186 KSGDVVSARLVFDEMS----ERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANE 241
Query: 197 YIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
+I AC+ + R K + + + + + +LI +Y K G +A S+ +
Sbjct: 242 VTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYR 301
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANE 314
+ D + +N++I G G +RE+ ++F +++++ P+ +T+ L+
Sbjct: 302 ASVK--ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGL 359
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+ +A + ++ G P Y ++ L + G ++DA+ ++EM K +
Sbjct: 360 VKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGS---MLGA 416
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKP 402
L+N G+L+ A K++E L+P
Sbjct: 417 LLNGCINHGNLELAETVGKKLIE--LQP 442
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 86/190 (45%), Gaps = 10/190 (5%)
Query: 280 GRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNS 339
G + A + S++ D P + + +I G+ + ++++ V M GL P TY
Sbjct: 56 GDVDYAYKFLSKLSD--PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPF 113
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG 399
+++ + + L + + ++ D CNTLI+ Y D SA K ++M
Sbjct: 114 LMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKN 173
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAIL 459
L T+ +++ + K ++ SA+ L+F D ++S ++DGY K+ + L
Sbjct: 174 L----VTWNSILDAYAKSGDVVSAR-LVF---DEMSERDVVTWSSMIDGYVKRGEYNKAL 225
Query: 460 ALPDEFLSKG 469
+ D+ + G
Sbjct: 226 EIFDQMMRMG 235
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 194/487 (39%), Gaps = 103/487 (21%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
PE N + ++ Y K R +A +F +M ++ + TV+L++L DG +
Sbjct: 104 PERNIVTCNAMLTGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAV 158
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++ + + N+ +N L+ ++ D+E+AKQ+ + M + D+ ++N +I Y
Sbjct: 159 ELFDEMPER----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGY 210
Query: 242 CKK-GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHV 300
+ GM L D E+ ++V++ S++YG+C+ G +REA R+F E+ + N V
Sbjct: 211 IENDGMEEAKLLFGDMSEK-----NVVTWTSMVYGYCRYGDVREAYRLFCEMPER--NIV 263
Query: 301 TYTTLIDGYCKANELDQAL-----------------------------------KVRELM 325
++T +I G+ +AL ++ E +
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQL 323
Query: 326 EAKGLYPGVATYN-------SILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINA 378
A+ + G T + S++ G I A LLNE D +CN +IN
Sbjct: 324 HAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE------SFDLQSCNIIINR 377
Query: 379 YSKIGDLKSALKFKNKM----------------LESG------------LKPDPFTYKAL 410
Y K GDL+ A ++ LE+G D T+ +
Sbjct: 378 YLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVM 437
Query: 411 IHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
I G + + A LL M+ G P +YS ++ N+D +
Sbjct: 438 ISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTA 497
Query: 471 CLDASVY--RALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA 528
C D + +L+ K IE A ++F M + D+V + S+ G A
Sbjct: 498 CYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKA 553
Query: 529 SNVLEEM 535
N+ +EM
Sbjct: 554 LNLFKEM 560
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 121/278 (43%), Gaps = 46/278 (16%)
Query: 271 SLIYGFCKEGRMREATRMFSEI-KDATPNHVTY-TTLIDGYCKANELDQA---------- 318
+LI EG + A + +I + + N V Y T+L+ Y K LD+A
Sbjct: 47 ALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 106
Query: 319 ------------LKVRELMEAKGLY----PGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+K R + EA L+ V ++ +L LC DGR DA +L +EM E
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
+ V ++ NTL+ + GD++ A + + M D ++ A+I G+ + D +E
Sbjct: 167 RNV----VSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEE 218
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
AK LLFG + ++ S +V GYC+ +V L E + + + A+I
Sbjct: 219 AK-LLFGDMSEKNVVTWTS---MVYGYCRYGDVREAYRLFCEMPERNIV----SWTAMIS 270
Query: 483 RLCKIEQIECAEKLFYHMEG--NGISGDSVIYTSLAYA 518
E A LF M+ + +S + SLAYA
Sbjct: 271 GFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYA 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 169/412 (41%), Gaps = 77/412 (18%)
Query: 122 PEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
PE N ++SW ++ +A + + ++AL +F +M+ + P L+S G V
Sbjct: 258 PERN--IVSWTAMISGFAWNELYREALMLFLEMK-KDVDAVSPNGETLISLAYACGGLGV 314
Query: 180 VWK-----IHKRLVQDG---VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDI 231
++ +H +++ +G V + + L+H + S + A+ LLNE D+
Sbjct: 315 EFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE------SFDL 368
Query: 232 FTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE 291
+ N +I+ Y K G A ++ ER D VS+ S+I G+ + G + A +F +
Sbjct: 369 QSCNIIINRYLKNGDLERAETL---FERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK 425
Query: 292 IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATY-------------- 337
+ D + VT+T +I G + +A + M GL P +TY
Sbjct: 426 LHD--KDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLD 483
Query: 338 -----------------------NSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
NS++ + G I DA ++ +M VQ D ++ N+
Sbjct: 484 QGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNS 539
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA- 433
+I S G AL +ML+SG KP+ T+ ++ + EL M +
Sbjct: 540 MIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETY 599
Query: 434 GFTPSYCSYSWIVDGYCK----KDNVDAILALPDEFLSKGLCLDASVYRALI 481
P Y ++D + K+ + I ALP D +VY AL+
Sbjct: 600 SIQPGIDHYISMIDLLGRAGKLKEAEEFISALP-------FTPDHTVYGALL 644
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 140/315 (44%), Gaps = 37/315 (11%)
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
V+ ++ Y + +DA +F + P ++L+++L G I +
Sbjct: 706 VIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTC 765
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
++ + L+ YN LI A ++ ++ A ++ M GV I TYNT+IS+Y +
Sbjct: 766 LEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQL 825
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE-----IKDATPNH--- 299
+A+ I R G+ LD Y ++I + K G+M EA +FSE IK TP++
Sbjct: 826 DKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMM 885
Query: 300 -----------------------------VTYTTLIDGYCKANELDQALKVRELMEAKGL 330
TY TLI Y ++++ +A K L++ KG+
Sbjct: 886 VKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Query: 331 YPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK 390
+ ++S+L L + G + +A + +MSE + D+ T++ Y GD + +
Sbjct: 946 PLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGIL 1005
Query: 391 FKNKMLESGLKPDPF 405
F KM+ S ++ D F
Sbjct: 1006 FYEKMIRSSVEDDRF 1020
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 158/374 (42%), Gaps = 3/374 (0%)
Query: 145 ALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIH 204
A + F +M +P AC +L + + G + + +K + + ++L+ +YN ++
Sbjct: 207 AEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLS 266
Query: 205 ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINL 264
+ K + L EM E+GV P+ FTY ++S Y K+G EAL +M+ G
Sbjct: 267 SLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVP 326
Query: 265 DIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVR 322
+ V+Y+S+I K G +A ++ +++ P++ T T++ Y K +AL +
Sbjct: 327 EEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLF 386
Query: 323 ELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
ME + I+R + G DA + E + AD T + +
Sbjct: 387 ADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNS 446
Query: 383 GDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSY 442
G++ AL M + F Y ++ + K+ ++ A+E + G P S
Sbjct: 447 GNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSC 505
Query: 443 SWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEG 502
+ +++ Y + + + + + + D +Y+ +R CK + A+ L M
Sbjct: 506 NDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGR 565
Query: 503 NGISGDSVIYTSLA 516
D+ +LA
Sbjct: 566 EARVKDNRFVQTLA 579
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 138/300 (46%), Gaps = 3/300 (1%)
Query: 235 NTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD 294
N +IS + ++G +A I D + R G+ ++ + +LI + ++ +++EA R++ +
Sbjct: 639 NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGE 698
Query: 295 A-TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDA 353
+ TP ++ID Y + L+ A + KG PG T + ++ L G+ R+A
Sbjct: 699 SKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREA 758
Query: 354 NKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHG 413
+ EK ++ D + NTLI A + G L+ A + +M SG+ TY +I
Sbjct: 759 EHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISV 818
Query: 414 FCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLD 473
+ + +L+ A E+ +G Y+ ++ Y K + L+L E KG+
Sbjct: 819 YGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPG 878
Query: 474 ASVYRALIRRLCKIEQIEC-AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVL 532
Y ++ ++C ++ ++L ME NG D Y +L Y +S + + A +
Sbjct: 879 TPSYNMMV-KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 131/317 (41%), Gaps = 2/317 (0%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
++ +Y ++ + ++ A++ EM E G PD T++ Y + G H L+
Sbjct: 187 SVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFY 246
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKA 312
++ I L YN ++ K+ + ++ E+ + PN TYT ++ Y K
Sbjct: 247 KAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQ 306
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
++ALK M++ G P TY+S++ + G A L +M + + N TC
Sbjct: 307 GFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTC 366
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
T+++ Y K + AL M + + D +I + K+ A+ +
Sbjct: 367 ATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETER 426
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
+Y + + NV L + + ++ + L Y +++ KI+ ++C
Sbjct: 427 LNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDC 486
Query: 493 AEKLFYHMEGNGISGDS 509
AE+ F + G+ S
Sbjct: 487 AEEAFRALSKTGLPDAS 503
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 97/255 (38%), Gaps = 35/255 (13%)
Query: 332 PGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
P V Y +LR Q G+I+ A + EM E + D + C T++ Y++ G + L F
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 392 KN-----------------------------------KMLESGLKPDPFTYKALIHGFCK 416
+M+E G+ P+ FTY ++ + K
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
E A + M GF P +YS ++ K + + + L ++ S+G+
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYT 365
Query: 477 YRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
++ K E A LF ME N I D VI + Y K G A ++ EE
Sbjct: 366 CATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETE 425
Query: 537 KRRLIITAKIYSCFS 551
+ L+ K Y S
Sbjct: 426 RLNLLADEKTYLAMS 440
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/466 (19%), Positives = 187/466 (40%), Gaps = 41/466 (8%)
Query: 127 QVLSWLVIH-YAKSRMTQDALQVFEQMRLYQL----KPHLPACTVLLSSLLKDGTTNVVW 181
+V+ L+I Y K + DA +FE+ L K +L V L+S G
Sbjct: 398 EVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNS----GNVVKAL 453
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+ + + + L+ + Y ++ +K ++V+ A++ + + G+ PD + N +++LY
Sbjct: 454 DVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLY 512
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF------SEIKD- 294
+ + +A ++ + ++ DI Y + + +CKEG + EA + + +KD
Sbjct: 513 TRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDN 572
Query: 295 ------ATPNHVTY----------TTLIDGYCKANELDQALKVRELMEAKGLYP------ 332
A H+ + +D L+ LK L E K +
Sbjct: 573 RFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTD 632
Query: 333 -GVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKF 391
G + N ++ ++G + A + + + ++ + T TLI Y + LK A +
Sbjct: 633 LGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRL 692
Query: 392 KNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK 451
ES P +++I + + LE A L + G P + S +V+
Sbjct: 693 YLAAGESK-TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTN 751
Query: 452 KDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVI 511
+ + L K + LD Y LI+ + + +++CA +++ M +G+
Sbjct: 752 RGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQT 811
Query: 512 YTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHG 557
Y ++ Y + + A + + L + KIY+ + G G
Sbjct: 812 YNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKG 857
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 125/287 (43%), Gaps = 8/287 (2%)
Query: 266 IVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRE 323
+V Y ++ + + G+++ A F E+ + P+ V T++ Y + L +
Sbjct: 188 VVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYK 247
Query: 324 LMEAKGLYPGVATYN---SILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
++ + + + YN S L+K G++ D L EM E+ V + T ++++Y+
Sbjct: 248 AVQERRILLSTSVYNFMLSSLQKKSFHGKVID---LWLEMVEEGVPPNEFTYTLVVSSYA 304
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
K G + ALK +M G P+ TY ++I K + E A L M G PS
Sbjct: 305 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNY 364
Query: 441 SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM 500
+ + ++ Y K +N L+L + + D + +IR K+ A+ +F
Sbjct: 365 TCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEET 424
Query: 501 EGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
E + D Y +++ + SG A +V+E M R + ++ Y
Sbjct: 425 ERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAY 471
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 92/229 (40%), Gaps = 52/229 (22%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKI 183
++ ++ + +++HY K +AL +F +M+ +KP P+
Sbjct: 842 LDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS-------------------- 881
Query: 184 HKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCK 243
YN ++ C+ SR +LL ME G D+ TY TLI +Y +
Sbjct: 882 ---------------YNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAE 926
Query: 244 KGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVT 301
EA ++ +GI L ++SL+ K G M EA R + ++ +A +P+
Sbjct: 927 SSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSAC 986
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRI 350
T++ GY + ++ G+ Y ++R +D R
Sbjct: 987 KRTILKGYMTCGDAEK---------------GILFYEKMIRSSVEDDRF 1020
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 184/430 (42%), Gaps = 41/430 (9%)
Query: 172 LKDGTTNVVWKIHKRLVQDGVV-LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPD 230
LK V W K+ GV+ N++IYN L+ A R A+++L +MEE+G+VP+
Sbjct: 162 LKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAM---RGFGEAEKILKDMEEEGIVPN 218
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNS--LIYGFCKEGRMREATRM 288
I TYNTL+ +Y ++G +AL I D + +G + ++Y++ L+Y ++G A
Sbjct: 219 IVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRMEDG--MGALEF 276
Query: 289 FSEIKD-----ATPNHVTY---------TTLIDGYC----------KANELDQALKVREL 324
F E+++ N V Y I C N + LK+
Sbjct: 277 FVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNA 336
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGD 384
M++ G+ P + ++ ++ +L + E+ + CN LI K
Sbjct: 337 MDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKK 396
Query: 385 LKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAK-------ELLFGMLDAGFTP 437
+AL+ +L+ G +P+ +Y+ ++ F + S + LL M D G P
Sbjct: 397 WWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKP 456
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
++ ++ K A + + + G Y AL+ L K + + A +++
Sbjct: 457 QRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVW 516
Query: 498 YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHG 557
HM GI + YT++A K ++ +L+EMA + I + + +V G
Sbjct: 517 NHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKG--IEPSVVTFNAVISGCA 574
Query: 558 ENKVSQMFWD 567
N +S + ++
Sbjct: 575 RNGLSGVAYE 584
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 123/274 (44%), Gaps = 9/274 (3%)
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTY------- 234
+++KR+ + +++ + N LI K++ A ++ ++ ++G P+ +Y
Sbjct: 367 ELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHF 426
Query: 235 NTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD 294
N L+S K+G+ + + +KME +G+ +N+++ K A ++F + D
Sbjct: 427 NILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVD 486
Query: 295 --ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
P ++Y L+ K D+A +V M G+ P + Y ++ L +
Sbjct: 487 NGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNL 546
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
+ LL EM+ K ++ +T N +I+ ++ G A ++ ++M ++P+ TY+ LI
Sbjct: 547 LDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIE 606
Query: 413 GFCKMDELESAKELLFGMLDAGFTPSYCSYSWIV 446
+ A EL + G S Y +V
Sbjct: 607 ALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 10/256 (3%)
Query: 118 IHDDPEVNSQVLSWLVIHY-------AKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSS 170
+ + PE N+ +V H+ +K + + +++ +M LKP +L +
Sbjct: 408 LDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVA 467
Query: 171 LLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPD 230
K T +I K +V +G + Y L+ A K + + A ++ N M + G+ P+
Sbjct: 468 CSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPN 527
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
++ Y T+ S+ + ++ +M +GI +V++N++I G + G A F
Sbjct: 528 LYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFH 587
Query: 291 EIK--DATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
+K + PN +TY LI+ + A ++ + +GL Y+++++ G
Sbjct: 588 RMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYG 647
Query: 349 RIRDANKLLNEMSEKK 364
D N LL +KK
Sbjct: 648 ATIDLN-LLGPRPDKK 662
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 135/322 (41%), Gaps = 17/322 (5%)
Query: 174 DGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFT 233
D T V K+ + GV + + LI AC++ K+L + E+ +
Sbjct: 324 DNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSV 383
Query: 234 YNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSY-------NSLIYGFCKEGRMREAT 286
N LI L K + AL I + + EG + +SY N L+ K G R
Sbjct: 384 CNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGV 443
Query: 287 RMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL 344
R+ ++++D P + ++ KA+E A+++ + M G P V +Y ++L L
Sbjct: 444 RLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSAL 503
Query: 345 CQDGRIRD-ANKLLNEMSEKKVQAD---NITCNTLINAYSKIGDLKSALKFKNKMLESGL 400
+ G++ D A ++ N M + ++ + T +++ K L + LK +M G+
Sbjct: 504 -EKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLK---EMASKGI 559
Query: 401 KPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILA 460
+P T+ A+I G + A E M P+ +Y +++
Sbjct: 560 EPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYE 619
Query: 461 LPDEFLSKGLCLDASVYRALIR 482
L + ++GL L + Y A+++
Sbjct: 620 LHVKAQNEGLKLSSKPYDAVVK 641
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 301 TYTTLIDGYCKANELDQALKV-----RELMEAKGLY-PGVATYNSILRKLCQDGRIRDAN 354
+ +I G+ K L A+ V R+ E+ G+ P + YNS+L + G +A
Sbjct: 148 VFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFG---EAE 204
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
K+L +M E+ + + +T NTL+ Y + G+ AL + E G +P+P TY + +
Sbjct: 205 KILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVY 264
Query: 415 CKMDELESAKELL 427
+M++ A E
Sbjct: 265 RRMEDGMGALEFF 277
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/460 (19%), Positives = 204/460 (44%), Gaps = 47/460 (10%)
Query: 117 RIHDD-PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDG 175
++ D+ P+ N+ + L++ Y ++ ++A+++F MR ++P + LS+ G
Sbjct: 229 KVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMG 288
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
+ H + +G+ L+ + L++ K +E A+ + + M EK D+ T+N
Sbjct: 289 GVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWN 344
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYG-------------------- 275
+IS Y ++G+ +A+ + M E + D V+ +L+
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRH 404
Query: 276 ---------------FCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALK 320
+ K G + +A ++F + + + + TL+ Y ++ +AL+
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE--KDLILWNTLLAAYAESGLSGEALR 462
Query: 321 VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYS 380
+ M+ +G+ P V T+N I+ L ++G++ +A + +M + + I+ T++N
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMV 522
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYC 440
+ G + A+ F KM ESGL+P+ F+ + + L + + ++ S
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 582
Query: 441 SY-SWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
S + +VD Y K +++ ++ L + + A+I ++ A L+
Sbjct: 583 SIETSLVDMYAKCGDINK----AEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 500 MEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
+EG G+ D++ T++ A +G + A + ++ +R
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKR 678
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/455 (19%), Positives = 196/455 (43%), Gaps = 23/455 (5%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N + + LVI YAK + A +F ++R+ ++ + ++ + G
Sbjct: 106 NEYIETKLVIFYAKCDALEIAEVLFSKLRVR----NVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
++++ + + ++ + AC + + + + + G+ +F ++L +Y K
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTY 302
G+ +A + D++ + + V++N+L+ G+ + G+ EA R+FS+++ P VT
Sbjct: 222 GVLDDASKVFDEIP----DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTV 277
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+T + +++ + + G+ S+L C+ G I A + + M E
Sbjct: 278 STCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFE 337
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
K V +T N +I+ Y + G ++ A+ M LK D T L+ + + L+
Sbjct: 338 KDV----VTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL 393
Query: 423 AKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
KE+ + F S ++D Y K ++ + D + K L L ++ A
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453
Query: 483 RLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLII 542
E A +LFY M+ G+ + + + + + ++G+ A ++ +M +I
Sbjct: 454 SGLSGE----ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGII- 508
Query: 543 TAKIYSCFSVPDGHGENKVSQ---MFWDHVVERGL 574
+ S ++ +G +N S+ +F + E GL
Sbjct: 509 -PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGL 542
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 161/355 (45%), Gaps = 12/355 (3%)
Query: 121 DPEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTN 178
D V ++ W L+ YA+S ++ +AL++F M+L + P++ +++ SLL++G +
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVD 493
Query: 179 VVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLI 238
+ ++ G++ N+ + +++ ++ E A L +M+E G+ P+ F+ +
Sbjct: 494 EAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 553
Query: 239 SLYCKKGMHYEALSIQDKMEREGINLDIVSY-NSLIYGFCKEGRMREATRMF-SEIKDAT 296
S + +I + R + +VS SL+ + K G + +A ++F S++
Sbjct: 554 SACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSEL 613
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P +I Y L +A+ + +E GL P T ++L G I A ++
Sbjct: 614 P---LSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEI 670
Query: 357 LNEMSEKKVQADNIT-CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
++ K+ + +++ + G+ + AL+ +M KPD ++L+
Sbjct: 671 FTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM---PFKPDARMIQSLVASCN 727
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL 470
K + E L +L++ S +Y I + Y + + D ++ + + +KGL
Sbjct: 728 KQRKTELVDYLSRKLLESEPENS-GNYVTISNAYAVEGSWDEVVKMREMMKAKGL 781
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 144/330 (43%), Gaps = 22/330 (6%)
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++ R+++ G + N ++ + V A+++ +EM K V + NT+IS +
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTV----STNTMISGH 89
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT----P 297
K G A + D M + +V++ L+ + + EA ++F ++ ++ P
Sbjct: 90 VKTGDVSSARDLFDAMP----DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP 145
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGL--YPGVATYNSILRKLCQDGRIRDANK 355
+HVT+TTL+ G A + +V G P + N +L+ C+ R+ A
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
L E+ EK D++T NTLI Y K G ++ KM +SG +P FT+ ++
Sbjct: 206 LFEEIPEK----DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDAS 475
+ + ++L + GF+ + I+D Y K D V L DE LD
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE----LDFV 317
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGI 505
Y +I + +Q E + F M+ G
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGF 347
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 188/494 (38%), Gaps = 96/494 (19%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
PE +S + L+ Y K + +++ +F +MR +P + +L +++ +
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++H V G + + N ++ SK V + L +EM E D +YN +IS Y
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL----DFVSYNVVISSY 326
Query: 242 CKKGMHYEALSIQDKMEREGIN---------LDIVSY----------------------- 269
+ + +L +M+ G + L I +
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 270 ---NSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELME 326
NSL+ + K EA +F + T V++T LI GY + LK+ M
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTT--VSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 327 AKGLYPGVATYNSILRK-----------------------------------LCQDGRIR 351
L +T+ ++L+ + G I+
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 352 DANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI 411
DA ++ EM ++ ++ N LI+A++ GD ++A+ KM+ESGL+PD + ++
Sbjct: 505 DAVQVFEEMPDRNA----VSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVL 560
Query: 412 HGFCKMDELESAKELLFGMLDA-GFTPSYCSYSWIVDGYCKKDNVDAILALPDEF-LSKG 469
+E E M G TP Y+ ++D + L DE
Sbjct: 561 TACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPD 620
Query: 470 LCLDASVYRALIRRLCKIEQIE-----CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGK 524
+ +SV A C+I + + AEKLF ME D+ Y S++ Y +G+
Sbjct: 621 EIMWSSVLNA-----CRIHKNQSLAERAAEKLF-SMEK---LRDAAAYVSMSNIYAAAGE 671
Query: 525 TSVASNVLEEMAKR 538
+V + M +R
Sbjct: 672 WEKVRDVKKAMRER 685
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 115/286 (40%), Gaps = 20/286 (6%)
Query: 128 VLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK 185
+SW L+ Y + + L++F +MR L+ +L + + + ++H
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHA 476
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
+++ G + N++ + L+ +K ++ A Q+ EM ++ V ++N LIS + G
Sbjct: 477 FIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV----SWNALISAHADNG 532
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF---SEIKDATPNHVTY 302
A+ KM G+ D VS ++ G + + T F S I TP Y
Sbjct: 533 DGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY 592
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
++D + +A K LM+ P ++S+L RI L +E
Sbjct: 593 ACMLDLLGRNGRFAEAEK---LMDEMPFEPDEIMWSSVLNAC----RIHKNQSLAERAAE 645
Query: 363 KKVQA----DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDP 404
K D ++ N Y+ G+ + K M E G+K P
Sbjct: 646 KLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVP 691
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 144/301 (47%), Gaps = 16/301 (5%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRL-YQLKPHLPACTVLLSSLLKDGTTNVVWK 182
VN +V + LV Y++S A + E+M+ + +P + ++L+ S L+ + V
Sbjct: 183 VNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 242
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRD-VERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+ + + G+ N YN LI A K++ VE L+ + E PD +T N+ + +
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 302
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNH 299
G + +K + GI +I ++N L+ + K G ++ + + ++ +
Sbjct: 303 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 362
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL--- 356
VTY +ID + +A +L Q + LM+++ ++P T S++R GR A+K+
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY---GRASKADKIGGV 419
Query: 357 LNEMSEKKVQADNITCNTLINAYS---KIGDLKSALKFKNKMLESGLKPDPFTYKALIHG 413
L + ++ D + N L++AY K ++K L+ M + G KPD TY+ ++
Sbjct: 420 LRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLEL---MEKKGFKPDKITYRTMVKA 476
Query: 414 F 414
+
Sbjct: 477 Y 477
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 171/395 (43%), Gaps = 13/395 (3%)
Query: 99 KIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMT----QDALQVFEQMRL 154
KIA R I + + + ++L V+ R+T + A+QVFE +R
Sbjct: 83 KIASRKAISIILRREATKSIIEKKKGSKKLLPRTVLESLHERITALRWESAIQVFELLR- 141
Query: 155 YQL--KPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDV 212
QL KP++ L+ L K ++ + ++ +G V+N +Y L+ A S+S
Sbjct: 142 EQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRF 201
Query: 213 ERAKQLLNEMEEK-GVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNS 271
+ A LL M+ PD+ TY+ LI + + + + M R+GI + ++YN+
Sbjct: 202 DAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNT 261
Query: 272 LI--YGFCKEGRMREAT--RMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEA 327
LI YG K E+T +M E D P+ T + + + +++ E ++
Sbjct: 262 LIDAYGKAKMFVEMESTLIQMLGE-DDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQS 320
Query: 328 KGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKS 387
G+ P + T+N +L + G + + ++ M + +T N +I+A+ + GDLK
Sbjct: 321 SGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQ 380
Query: 388 ALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVD 447
M + P T +L+ + + + + +L + ++ ++ +VD
Sbjct: 381 MEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVD 440
Query: 448 GYCKKDNVDAILALPDEFLSKGLCLDASVYRALIR 482
Y + + + + + KG D YR +++
Sbjct: 441 AYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVK 475
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 5/260 (1%)
Query: 283 REATRMFSEIKDATPNHVTYTTLIDGYCKANEL--DQALKVRELMEAKGLY-PGVATYNS 339
REAT+ E K + + T L + + L + A++V EL+ + Y P V Y
Sbjct: 96 REATKSIIEKKKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWYKPNVGIYVK 155
Query: 340 ILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES- 398
++ L + + A++L EM + ++ L++AYS+ G +A +M S
Sbjct: 156 LIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSH 215
Query: 399 GLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAI 458
+PD TY LI F ++ + ++LL M G P+ +Y+ ++D Y K +
Sbjct: 216 NCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEM 275
Query: 459 LALPDEFLSKGLC-LDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAY 517
+ + L + C D+ + +R QIE E + + +GI + + L
Sbjct: 276 ESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLD 335
Query: 518 AYWKSGKTSVASNVLEEMAK 537
+Y KSG S V+E M K
Sbjct: 336 SYGKSGNYKKMSAVMEYMQK 355
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 140/311 (45%), Gaps = 15/311 (4%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNE------MEEKGVVPDIFTYNTLISLYCKKGMHY 248
NI +Y + + ++ E +++L E M ++G V I I+LY + GM
Sbjct: 70 NIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARI------INLYGRVGMFE 123
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK---DATPNHVTYTTL 305
A + D+M +S+N+L+ + +F E+ P+ +Y TL
Sbjct: 124 NAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTL 183
Query: 306 IDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKV 365
I G C +A+ + + +E KGL P T+N +L + G+ + ++ M EK V
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNV 243
Query: 366 QADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
+ D + N + + + + +K+ + LKPD FT+ A+I GF +L+ A
Sbjct: 244 KRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAIT 303
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+ G P ++ ++ CK ++++ L E +K L +D +V + ++ L
Sbjct: 304 WYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALV 363
Query: 486 KIEQIECAEKL 496
K + + AE++
Sbjct: 364 KGSKQDEAEEI 374
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
Query: 157 LKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAK 216
++P + + L+ L G+ + + G+ + +N L+H E +
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 217 QLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGF 276
Q+ M EK V DI +YN + + E +S+ DK++ + D+ ++ ++I GF
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 277 CKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGV 334
EG++ EA + EI+ P + +L+ CKA +L+ A ++ + + AK L
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDE 352
Query: 335 ATYNSILRKLCQDGRIRDANKLL 357
A ++ L + + +A +++
Sbjct: 353 AVLQEVVDALVKGSKQDEAEEIV 375
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Query: 144 DALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
+A+ + +++ LKP +LL G +I R+V+ V +I YN +
Sbjct: 195 EAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARL 254
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGIN 263
+ E L ++++ + PD+FT+ +I + +G EA++ ++E+ G
Sbjct: 255 LGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCR 314
Query: 264 LDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKV 321
+NSL+ CK G + A + EI K + ++D K ++ D+A ++
Sbjct: 315 PLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374
Query: 322 REL 324
EL
Sbjct: 375 VEL 377
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 140/290 (48%), Gaps = 27/290 (9%)
Query: 165 TVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE 224
+VL +L+D +++V KR DG + Y + + +C +RD +
Sbjct: 97 SVLEEVMLEDSSSSV-----KR---DGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALK 148
Query: 225 KGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMRE 284
G + D++ ++L+ LY G A + ++M ++VS+ ++I GF +E R+
Sbjct: 149 GGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPER----NVVSWTAMISGFAQEWRVDI 204
Query: 285 ATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATY----N 338
+++S+++ +T PN T+T L+ + L Q V + L+ G+ +Y N
Sbjct: 205 CLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSV----HCQTLHMGLKSYLHISN 260
Query: 339 SILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALK-FKNKMLE 397
S++ C+ G ++DA ++ ++ S K V ++ N++I Y++ G A++ F+ M +
Sbjct: 261 SLISMYCKCGDLKDAFRIFDQFSNKDV----VSWNSMIAGYAQHGLAMQAIELFELMMPK 316
Query: 398 SGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVD 447
SG KPD TY ++ ++ ++ M + G P YS +VD
Sbjct: 317 SGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVD 366
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 149/336 (44%), Gaps = 53/336 (15%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S LV+ Y S ++A +VFE+M + ++ + T ++S ++ ++ K++ ++ +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMP----ERNVVSWTAMISGFAQEWRVDICLKLYSKMRK 214
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
N Y + L+ AC+ S + + + + + G+ + N+LIS+YCK G +
Sbjct: 215 STSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKD 274
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDAT-PNHVTYTTLI 306
A I D+ N D+VS+NS+I G+ + G +A +F + K T P+ +TY ++
Sbjct: 275 AFRIFDQFS----NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVL 330
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK--- 363
A + + K LM GL P + Y+ ++ L + G +++A +L+ M K
Sbjct: 331 SSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 364 ----------KVQADNIT--------------CNT----LINAYSKIGDLKSALKFKNKM 395
+V D T C L N Y+ +G K A + M
Sbjct: 391 VIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLM 450
Query: 396 LESGLKPDP-----------FTYKALIHGFCKMDEL 420
+ GLK +P F +KA C+M E+
Sbjct: 451 KDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEI 486
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 194/464 (41%), Gaps = 65/464 (14%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
+ E N+ + ++ Y+++ A++ F +R + + +L++ V
Sbjct: 187 EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVG 246
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
++H +V+ G NIY+ + LI +K R++E A+ LL ME V D+ ++N++I
Sbjct: 247 VQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGME----VDDVVSWNSMIVG 302
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFC-KEGRMREATRMFSEIKDATPNH 299
++G+ EALS+ +M + +D + S++ F M+ A+ I +
Sbjct: 303 CVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI--VKTGY 360
Query: 300 VTY----TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
TY L+D Y K +D ALKV E M K V ++ +++ +G +A K
Sbjct: 361 ATYKLVNNALVDMYAKRGIMDSALKVFEGMIEK----DVISWTALVTGNTHNGSYDEALK 416
Query: 356 LLNEMSEKKVQADNITC-----------------------------------NTLINAYS 380
L M + D I N+L+ Y+
Sbjct: 417 LFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYT 476
Query: 381 KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA-GFTPSY 439
K G L+ A N + S D T+ LI G+ K LE A+ M G TP
Sbjct: 477 KCGSLEDA----NVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGP 532
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI---RRLCKIEQIECAEKL 496
Y+ ++D + + + + L + + DA+V++A++ R+ IE E A K
Sbjct: 533 EHYACMIDLFGRSGDFVKVEQLLHQMEVEP---DATVWKAILAASRKHGNIENGERAAKT 589
Query: 497 FYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
+E N ++V Y L+ Y +G+ A+NV M R +
Sbjct: 590 LMELEPN----NAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/505 (21%), Positives = 219/505 (43%), Gaps = 43/505 (8%)
Query: 84 LAKYKHFKTAQQMLDKIAHRD---FXXXXXXXXXXXRIHD-------DPEVNSQVLSWLV 133
L+K A+QM DK+ RD + R+ D +P N+ + L+
Sbjct: 38 LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALI 97
Query: 134 IHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW----KIHKRLVQ 189
Y KS +A +F +M+ +KP+ L S+L+ T+ V+ +IH ++
Sbjct: 98 SGYCKSGSKVEAFNLFWEMQSDGIKPN----EYTLGSVLRMCTSLVLLLRGEQIHGHTIK 153
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEME-EKGVVPDIFTYNTLISLYCKKGMHY 248
G L++ + N L+ ++ + + A+ L ME EK V T+ ++++ Y + G +
Sbjct: 154 TGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNV----TWTSMLTGYSQNGFAF 209
Query: 249 EALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLI 306
+A+ + REG + ++ S++ R ++ I + N + LI
Sbjct: 210 KAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALI 269
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
D Y K E++ A + E ME V ++NS++ + G I +A + M E+ ++
Sbjct: 270 DMYAKCREMESARALLEGMEVD----DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 367 ADNITCNTLINAYS-KIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
D+ T +++N ++ ++K A ++++G AL+ + K ++SA +
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALK 385
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+ GM++ S++ +V G + D L L G+ D V +++
Sbjct: 386 VFEGMIE----KDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASA 441
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAK 545
++ +E +++ + +G + SL Y K G A+ + M R LI
Sbjct: 442 ELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLI---- 497
Query: 546 IYSCFSVPDGHGENKV---SQMFWD 567
++C V G+ +N + +Q ++D
Sbjct: 498 TWTCLIV--GYAKNGLLEDAQRYFD 520
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 42/265 (15%)
Query: 200 NCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER 259
N L+ SKS V+ A+Q+ ++M E+ D FT+NT+I Y LS +K+ R
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNS----RRLSDAEKLFR 83
Query: 260 EGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTL------------ 305
+ +S+N+LI G+CK G EA +F E++ PN T ++
Sbjct: 84 SNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLR 143
Query: 306 ---IDGYCKANELDQALKV-----------RELMEAKGLYPGV------ATYNSILRKLC 345
I G+ D + V + + EA+ L+ + T+ S+L
Sbjct: 144 GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYS 203
Query: 346 QDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPF 405
Q+G A + ++ + Q++ T +++ A + + + ++ +++SG K + +
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY 263
Query: 406 TYKALIHGFCKMDELESAKELLFGM 430
ALI + K E+ESA+ LL GM
Sbjct: 264 VQSALIDMYAKCREMESARALLEGM 288
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 21/191 (10%)
Query: 338 NSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLE 397
N +L L + GR+ +A ++ ++M E+ D T NT+I AYS L A K+
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNSRRLSDA----EKLFR 83
Query: 398 SGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDA 457
S + ++ ALI G+CK A L + M G P+ + G +
Sbjct: 84 SNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTL-----GSVLRMCTSL 138
Query: 458 ILALPDE-----FLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIY 512
+L L E + G LD +V L+ + ++I AE LF MEG ++V +
Sbjct: 139 VLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG---EKNNVTW 195
Query: 513 TSLAYAYWKSG 523
TS+ Y ++G
Sbjct: 196 TSMLTGYSQNG 206
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 80 MIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSW--LVIHYA 137
+I + A++ + Q++ D++ RD ++SW ++ Y
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRD-----------------------LISWNSIIKAYE 324
Query: 138 KSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIY 197
+ A+ +F++MRL +++P C L+S
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPD---CLTLIS---------------------------- 353
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKG-VVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
L S+ D+ + + KG + DI N ++ +Y K G+ A ++ +
Sbjct: 354 ----LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFS---EIKDATPNHVTYTTLIDGYCKAN 313
+ N D++S+N++I G+ + G EA M++ E + N T+ +++ +A
Sbjct: 410 LP----NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
L Q +K+ + GLY V S+ + GR+ DA L ++ + +++ N
Sbjct: 466 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP----RVNSVPWN 521
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML-- 431
TLI + G + A+ +ML+ G+KPD T+ L+ C L + F M+
Sbjct: 522 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA-CSHSGLVDEGQWCFEMMQT 580
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
D G TPS Y +VD Y + ++ L S L DAS++ AL+ C++
Sbjct: 581 DYGITPSLKHYGCMVDMYGRAGQLETALKF---IKSMSLQPDASIWGALLSA-CRV 632
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 204/459 (44%), Gaps = 33/459 (7%)
Query: 125 NSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW- 181
N V +W ++ Y ++ + + ++ F L+ L L S+LK T +
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFS---LFMLSSGLTPDYRTFPSVLKACRTVIDGN 170
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
KIH ++ G + ++Y+ LIH S+ + V A+ L +EM V D+ ++N +IS Y
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP----VRDMGSWNAMISGY 226
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS-EIKDATPNHV 300
C+ G EAL++ + + +D V+ SL+ + G + S IK + +
Sbjct: 227 CQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 301 TYTT-LIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
+ LID Y + L KV + M + L ++NSI++ + + A L E
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLI----SWNSIIKAYELNEQPLRAISLFQE 338
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY-KALIHGFCKMD 418
M ++Q D +T +L + S++GD+++ + L G + T A++ + K+
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 419 ELESAKELLFGMLDAGFTPSYCSYSW--IVDGYCKKDNVDAILALPDEFLSKG-LCLDAS 475
++SA+ + + P+ SW I+ GY + + + + +G + +
Sbjct: 399 LVDSARAVF------NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 476 VYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
+ +++ + + KL + NG+ D + TSLA Y K G+ A ++ ++
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 536 AKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVERGL 574
+ + + +C GHGE V M + +++ G+
Sbjct: 513 PRVNSVPWNTLIACHGF-HGHGEKAV--MLFKEMLDEGV 548
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 169/409 (41%), Gaps = 52/409 (12%)
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
L+ AC+++ D R + + + G+ ++F N LI LY + G + + D+M
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR- 311
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQAL 319
D++S+NS+I + + A +F E++ + P+ +T +L + ++
Sbjct: 312 ---DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 320 KVRELMEAKGLY--------------------------------PGVATYNSILRKLCQD 347
V+ KG + V ++N+I+ Q+
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 348 GRIRDANKLLNEMSEK-KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFT 406
G +A ++ N M E+ ++ A+ T +++ A S+ G L+ +K ++L++GL D F
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 407 YKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW--IVDGYCKKDNVDAILALPDE 464
+L + K LE A L + + P S W ++ + + + + L E
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQI------PRVNSVPWNTLIACHGFHGHGEKAVMLFKE 542
Query: 465 FLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGN-GISGDSVIYTSLAYAYWKSG 523
L +G+ D + L+ ++ + F M+ + GI+ Y + Y ++G
Sbjct: 543 MLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAG 602
Query: 524 KTSVASNVLEEMAKRRLIITAKIYSC-FSVPDGHGENKVSQMFWDHVVE 571
+ A ++ M+ L A I+ S HG + ++ +H+ E
Sbjct: 603 QLETALKFIKSMS---LQPDASIWGALLSACRVHGNVDLGKIASEHLFE 648
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 164/385 (42%), Gaps = 43/385 (11%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y LI CS++R +E K++ + G VP I +N L+ +Y K G +A + D+M
Sbjct: 88 YCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMP 147
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQA 318
N D+ S+N ++ G+ + G + EA ++F E+ + + ++T ++ GY K ++ ++A
Sbjct: 148 ----NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK--DSYSWTAMVTGYVKKDQPEEA 201
Query: 319 LKVRELME-AKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
L + LM+ P + T + + IR ++ + + +D + ++L++
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 378 AYSKIGDLKSALKFKNKMLESGL-------------------------------KPDPFT 406
Y K G + A +K++E + +P+ +T
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 407 YKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFL 466
+ +++ + E K++ M GF P + S +VD Y K N+++ + D
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 467 SKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTS 526
D + +LI + Q + A K F + +G D V + ++ A +G
Sbjct: 382 KP----DLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVE 437
Query: 527 VASNVLEEMA-KRRLIITAKIYSCF 550
+ K RL T+ Y+C
Sbjct: 438 KGLEFFYSITEKHRLSHTSDHYTCL 462
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 269 YNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAK 328
+ I C + +REA ++ K P TY LI + L++ KV E +
Sbjct: 57 FGEAIDVLCGQKLLREAVQLLGRAKK--PPASTYCNLIQVCSQTRALEEGKKVHEHIRTS 114
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSA 388
G PG+ +N +LR + G + DA K+ +EM + D + N ++N Y+++G L+ A
Sbjct: 115 GFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR----DLCSWNVMVNGYAEVGLLEEA 170
Query: 389 LKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
K ++M E D +++ A++ G+ K D+ E A
Sbjct: 171 RKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEA 201
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 287 RMFSEIKDATPNHVTYTTLIDGYCKANELDQALKV-------RELME--AKGLYPGVATY 337
+ FS+ K PNH +++ C+AN +A+ V RE ++ + P +TY
Sbjct: 29 KRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTY 88
Query: 338 NSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLE 397
++++ Q + + K+ + + N L+ Y+K G L A K ++M
Sbjct: 89 CNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPN 148
Query: 398 SGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSW--IVDGYCKKDNV 455
D ++ +++G+ ++ LE A++L M + SYSW +V GY KKD
Sbjct: 149 R----DLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD------SYSWTAMVTGYVKKDQP 198
Query: 456 DAILAL-----------PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNG 504
+ L L P+ F + + + A+ IRR +++ H+ G
Sbjct: 199 EEALVLYSLMQRVPNSRPNIF-TVSIAVAAAAAVKCIRR---------GKEIHGHIVRAG 248
Query: 505 ISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
+ D V+++SL Y K G A N+ +++ ++ ++
Sbjct: 249 LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 140/355 (39%), Gaps = 54/355 (15%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S L+ Y K +A +F+++ ++ + + T ++ K + + LV
Sbjct: 257 SSLMDMYGKCGCIDEARNIFDKI----VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 312
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
N Y + +++AC+ E KQ+ M G P F ++L+ +Y K G
Sbjct: 313 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIES 372
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS-EIKDAT-PNHVTYTTLID 307
A + D + D+VS+ SLI G + G+ EA + F +K T P+HVT+ ++
Sbjct: 373 AKHVVDGCPKP----DLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLS 428
Query: 308 GYCKANELDQALK-VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK--- 363
A +++ L+ + E L Y ++ L + GR +++EM K
Sbjct: 429 ACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSK 488
Query: 364 ---------------------------KVQADN-ITCNTLINAYSKIGDLKSALKFKNKM 395
K++ +N +T T+ N Y+ G + K + +M
Sbjct: 489 FLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRM 548
Query: 396 LESGLKPDPFTYKALI----HGFCKMDE--------LESAKELLFGMLDAGFTPS 438
E G+ P + I H F D +E +EL M + G+ P+
Sbjct: 549 QEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPA 603
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 159/347 (45%), Gaps = 43/347 (12%)
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+++R++ N Y + L+ ACS E Q+ ++ + G D++ N+LI+ Y
Sbjct: 102 LYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYA 161
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTY 302
G A + D++ D VS+NS+I G+ K G+M A +F ++ A N +++
Sbjct: 162 VTGNFKLAHLLFDRIPEP----DDVSWNSVIKGYVKAGKMDIALTLFRKM--AEKNAISW 215
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
TT+I GY +A+ +AL++ M+ + P + + L Q G + + + +++
Sbjct: 216 TTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK 275
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALK-FKN---------------------------- 393
+++ D++ LI+ Y+K G+++ AL+ FKN
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISK 335
Query: 394 --KMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM-LDAGFTPSYCSYSWIVDGYC 450
+M + G+KP+ T+ A++ +E K + + M D P+ Y IVD
Sbjct: 336 FMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLG 395
Query: 451 KKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ-IECAEKL 496
+ +D E K +A ++ AL+ + C+I + IE E++
Sbjct: 396 RAGLLDEAKRFIQEMPLKP---NAVIWGALL-KACRIHKNIELGEEI 438
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 137/307 (44%), Gaps = 10/307 (3%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
+ +++N +I S S + ER+ L M + +T+ +L+ E I
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANE 314
++ + G D+ + NSLI + G + A +F I + P+ V++ ++I GY KA +
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE--PDDVSWNSVIKGYVKAGK 196
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+D AL + M K ++ +++ Q ++A +L +EM V+ DN++
Sbjct: 197 MDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
++A +++G L+ + + ++ ++ D LI + K E+E A E+ +
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK--- 309
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
S +++ ++ GY + ++ E G+ + + A++ +E +
Sbjct: 310 -KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
Query: 495 KLFYHME 501
+FY ME
Sbjct: 369 LIFYSME 375
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 114/246 (46%), Gaps = 16/246 (6%)
Query: 128 VLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK 185
+SW ++ Y ++ M ++ALQ+F +M+ ++P + LS+ + G IH
Sbjct: 212 AISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHS 271
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
L + + ++ + LI +K ++E A ++ +++K V + LIS Y G
Sbjct: 272 YLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHG 327
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK---DATPNHVTY 302
EA+S +M++ GI +++++ +++ G + E +F ++ + P Y
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
++D +A LD+A + ++ L P + ++L K C RI +L E+ E
Sbjct: 388 GCIVDLLGRAGLLDEA---KRFIQEMPLKPNAVIWGALL-KAC---RIHKNIELGEEIGE 440
Query: 363 KKVQAD 368
+ D
Sbjct: 441 ILIAID 446
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 117/269 (43%), Gaps = 9/269 (3%)
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
P+ + +I G+ ++E +++L + + M T+ S+L+ + ++
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
++++ + D N+LIN+Y+ G+ K A +++ E PD ++ ++I G+ K
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVK 193
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASV 476
+++ A L M + + S++ ++ GY + D L L E + + D
Sbjct: 194 AGKMDIALTLFRKMAE----KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 477 YRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMA 536
+ ++ +E + + ++ I DSV+ L Y K G+ A V + +
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 537 KRRLIITAKIYSCFSVPDGHGENKVSQMF 565
K+ + + S ++ GHG +S+
Sbjct: 310 KKSVQAWTALISGYAY-HGHGREAISKFM 337
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 191/411 (46%), Gaps = 22/411 (5%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
+AK ALQ F +MR ++P + T LL + V +IH LV+ G L+
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD 169
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
++ L + +K R V A+++ + M E+ D+ ++NT+++ Y + GM AL +
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 256 KMEREGINLDIVSYNSLIYG-----FCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYC 310
M E + ++ S++ G+ M S D+ N T L+D Y
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF-DSLVN--ISTALVDMYA 282
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
K L+ A R+L + L V ++NS++ Q+ ++A + +M ++ V+ ++
Sbjct: 283 KCGSLETA---RQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 371 TCNTLINAYSKIGDLKSALKFKNKM-LESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
+ ++A + +GDL+ +F +K+ +E GL + +LI +CK E+++A +FG
Sbjct: 339 SVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS-MFG 396
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
L + + S++ ++ G+ + L + S+ + D Y ++I + ++
Sbjct: 397 KLQ---SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 490 IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
A+ + + + + + + T+L Y K G +A + + M++R +
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHV 504
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 181/424 (42%), Gaps = 41/424 (9%)
Query: 85 AKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSW--LVIHYAKSRMT 142
AK + A+++ D++ RD ++SW +V Y+++ M
Sbjct: 181 AKCRQVNEARKVFDRMPERD-----------------------LVSWNTIVAGYSQNGMA 217
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCL 202
+ AL++ + M LKP +L ++ +V +IH ++ G + I L
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 203 IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGI 262
+ +K +E A+QL + M E+ VV ++N++I Y + EA+ I KM EG+
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVV----SWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 263 NLDIVSYNSLIYGFCKEGRMREATRMFSEIK---DATPNHVTYTTLIDGYCKANELDQAL 319
VS ++ G + E R ++ N +LI YCK E+D A
Sbjct: 334 KPTDVSVMGALHACADLGDL-ERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+ ++++ L ++N+++ Q+GR DA ++M + V+ D T ++I A
Sbjct: 393 SMFGKLQSRTL----VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAI 448
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSY 439
+++ A ++ S L + F AL+ + K + A+ L+F M+
Sbjct: 449 AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR-LIFDMMSERHV--- 504
Query: 440 CSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYH 499
+++ ++DGY A L L +E + + + ++I +E K FY
Sbjct: 505 TTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYM 564
Query: 500 MEGN 503
M+ N
Sbjct: 565 MKEN 568
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 168/401 (41%), Gaps = 21/401 (5%)
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
R+ D V +Y + L+ C ++ K++ + + G D+F L ++Y K
Sbjct: 125 RMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCR 184
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYT 303
EA + D+M D+VS+N+++ G+ + G R A M + ++ P+ +T
Sbjct: 185 QVNEARKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIV 240
Query: 304 TLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
+++ + ++ G V +++ + G + A +L + M E+
Sbjct: 241 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 300
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
V ++ N++I+AY + + K A+ KML+ G+KP + +H + +LE
Sbjct: 301 NV----VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Query: 424 KELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRR 483
+ + ++ G + + ++ YCK VD ++ + S+ L + A+I
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV----SWNAMILG 412
Query: 484 LCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVA----SNVLEEMAKRR 539
+ + A F M + D+ Y S+ A + T A V+ +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 540 LIITAKIYSCFSVPDGHGENKVSQMFWDHVVERGLMSRNTM 580
+ +T + ++ G ++++ +D + ER + + N M
Sbjct: 473 VFVTTALVDMYA---KCGAIMIARLIFDMMSERHVTTWNAM 510
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 163/380 (42%), Gaps = 58/380 (15%)
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
L+ CS +++ +Q+L + + G+ + F L+SL+C+ G EA + + ++ +
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK- 98
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANELDQAL 319
L+++ Y++++ GF K + +A + F ++ D P +T L+ EL
Sbjct: 99 --LNVL-YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK 155
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
++ L+ G + + + ++ +A K+ + M E+ D ++ NT++ Y
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGY 211
Query: 380 SKIGDLKSALKFKNKMLESGLKPDPFTYKAL---------------IHG----------- 413
S+ G + AL+ M E LKP T ++ IHG
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271
Query: 414 ---------FCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDE 464
+ K LE+A++L GML+ S++ ++D Y + +N + + +
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVV----SWNSMIDAYVQNENPKEAMLIFQK 327
Query: 465 FLSKGL-CLDASVYRAL--IRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWK 521
L +G+ D SV AL L +E+ KL + G+ + + SL Y K
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL---GLDRNVSVVNSLISMYCK 384
Query: 522 SGKTSVASNVLEEMAKRRLI 541
+ A+++ ++ R L+
Sbjct: 385 CKEVDTAASMFGKLQSRTLV 404
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 204/471 (43%), Gaps = 57/471 (12%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSW--LVIHY 136
MI K + ++A+++ D+++ RD V+SW ++ Y
Sbjct: 172 GMITYYTKCDNIESARKVFDEMSERD-----------------------VVSWNSMISGY 208
Query: 137 AKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
++S +D ++++ M KP+ + + + ++HK+++++ + ++
Sbjct: 209 SQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMD 268
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ + N +I +K ++ A+ L +EM EK D TY +IS Y G+ EA+++
Sbjct: 269 LSLCNAVIGFYAKCGSLDYARALFDEMSEK----DSVTYGAIISGYMAHGLVKEAMALFS 324
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKAN 313
+ME G++ ++N++I G + E F E+ + PN VT ++L+ ++
Sbjct: 325 EMESIGLS----TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSS 380
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
L ++ G + SI+ + G + A ++ + ++ + I
Sbjct: 381 NLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSL----IAWT 436
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
+I AY+ GD SA ++M G KPD T A++ F + + A+ + ML
Sbjct: 437 AIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTK 496
Query: 434 -GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLD--ASVYRALIRRLCKIEQI 490
P Y+ +V + + + EF+SK + +D A V+ AL+ + +
Sbjct: 497 YDIEPGVEHYACMVSVLSRAGKLSDAM----EFISK-MPIDPIAKVWGALLNGASVLGDL 551
Query: 491 ECA----EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
E A ++LF ME YT +A Y ++G+ A V +M +
Sbjct: 552 EIARFACDRLF-EMEPENTGN----YTIMANLYTQAGRWEEAEMVRNKMKR 597
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 152/376 (40%), Gaps = 56/376 (14%)
Query: 200 NCLIHACSKSRDV---ERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDK 256
+C++ A S D A+Q+ + G D+F N +I+ Y K A + D+
Sbjct: 133 SCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDE 192
Query: 257 MEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPNHVTYTTLIDGYCKAN 313
M D+VS+NS+I G+ + G + +M+ + D PN VT ++ +++
Sbjct: 193 MSER----DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSS 248
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
+L L+V + M + ++ N+++ + G + A L +EMSEK D++T
Sbjct: 249 DLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK----DSVTYG 304
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
+I+ Y G +K A+ ++M GL T+ A+I G + + E M+
Sbjct: 305 AIISGYMAHGLVKEAMALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFREMIRC 360
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECA 493
G P+ + S + LP S L ++ IR
Sbjct: 361 GSRPNTVTLSSL---------------LPSLTYSSNLKGGKEIHAFAIR----------- 394
Query: 494 EKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVP 553
NG + + TS+ Y K G A V + R LI I + ++V
Sbjct: 395 ---------NGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAV- 444
Query: 554 DGHGENKVSQMFWDHV 569
HG++ + +D +
Sbjct: 445 --HGDSDSACSLFDQM 458
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 151/355 (42%), Gaps = 50/355 (14%)
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++H +++ G ++++ N +I +K ++E A+++ +EM E+ D+ ++N++IS Y
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSER----DVVSWNSMISGY 208
Query: 242 CKKGMH------YEA------------------------------LSIQDKMEREGINLD 265
+ G Y+A L + KM I +D
Sbjct: 209 SQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMD 268
Query: 266 IVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELM 325
+ N++I + K G + A +F E+ + + VTY +I GY + +A+ + M
Sbjct: 269 LSLCNAVIGFYAKCGSLDYARALFDEMSE--KDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Query: 326 EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDL 385
E+ GL +T+N+++ L Q+ + EM + + +T ++L+ + + +L
Sbjct: 327 ESIGL----STWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNL 382
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
K + + +G + + ++I + K+ L A+ + D S +++ I
Sbjct: 383 KGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKD----RSLIAWTAI 438
Query: 446 VDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM 500
+ Y + D+ +L D+ G D A++ + A+ +F M
Sbjct: 439 ITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSM 493
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 129/320 (40%), Gaps = 24/320 (7%)
Query: 199 YNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKME 258
Y LI ++ R QL + + PD F + LIS Y ++ +AL + D++
Sbjct: 25 YGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEIT 84
Query: 259 REGINLDIVSYNSLIYGFCKEGRMREATRMF--------SEIKDATPNHVTYTTLIDGYC 310
+ SYN+L+ + +A +F A P+ ++ + ++
Sbjct: 85 VR----NAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALS 140
Query: 311 KANEL---DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
++ A +V + G V N ++ + I A K+ +EMSE+ V
Sbjct: 141 GCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV-- 198
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLE-SGLKPDPFTYKALIHGFCKMDELESAKEL 426
++ N++I+ YS+ G + K ML S KP+ T ++ + +L E+
Sbjct: 199 --VSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEV 256
Query: 427 LFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
M++ + ++ Y K ++D AL DE K D+ Y A+I
Sbjct: 257 HKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK----DSVTYGAIISGYMA 312
Query: 487 IEQIECAEKLFYHMEGNGIS 506
++ A LF ME G+S
Sbjct: 313 HGLVKEAMALFSEMESIGLS 332
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/318 (18%), Positives = 129/318 (40%), Gaps = 42/318 (13%)
Query: 123 EVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
E +S ++ Y + ++A+ +F +M L ++S L+++ V
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEME----SIGLSTWNAMISGLMQNNHHEEVIN 352
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ +++ G N + L+ + + S +++ K++ G +I+ ++I Y
Sbjct: 353 SFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYA 412
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHV 300
K G A + D + + ++++ ++I + G A +F +++ P+ V
Sbjct: 413 KLGFLLGAQRVFDNCK----DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDV 468
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAK-GLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
T T ++ + + + D A + + M K + PGV Y ++ L + G++ DA + +++
Sbjct: 469 TLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISK 528
Query: 360 M-------------SEKKVQAD----NITCNTLI--------------NAYSKIGDLKSA 388
M + V D C+ L N Y++ G + A
Sbjct: 529 MPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEA 588
Query: 389 LKFKNKMLESGLKPDPFT 406
+NKM GLK P T
Sbjct: 589 EMVRNKMKRIGLKKIPGT 606
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 157/367 (42%), Gaps = 16/367 (4%)
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA 250
G LN++ + + ++ D++ A +L + P +FT N +I+ + + E+
Sbjct: 143 GQRLNLH---NRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSES 199
Query: 251 LSI-QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI---KDATPNHVTYTTLI 306
+S+ Q ++ I ++VSYN +I C EG + EA ++ I P+ VTY L
Sbjct: 200 ISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLT 259
Query: 307 DGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQ 366
G +A + A + M +KG YN+++R G A + +E+ K
Sbjct: 260 KGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTV 319
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
D I T + + + G+ K A++ +L+ + P T L+ F K + + A L
Sbjct: 320 YDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWAL 379
Query: 427 LFGMLDAGFTPSYCSYS----WIVDGYCKK-----DNVDAILALPDEFLSKGLCLDASVY 477
MLD P+ S + I+ C K + ++ + + SK +D Y
Sbjct: 380 FNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGY 439
Query: 478 RALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
++ R C+ + AE+ F + D+ + ++ AY K+ + A +L+ M
Sbjct: 440 CNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVD 499
Query: 538 RRLIITA 544
L + A
Sbjct: 500 VNLRVVA 506
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 138/337 (40%), Gaps = 51/337 (15%)
Query: 144 DALQVFEQMRLYQLKPHLPACTV---LLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYN 200
+AL+V+ + P P+ L L++ G + + ++ G + +YN
Sbjct: 234 EALEVYR--HILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYN 291
Query: 201 CLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMERE 260
LI D ++A + +E++ K V D T + + +KG EA+ + +
Sbjct: 292 NLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDK 351
Query: 261 GINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTT-----LIDGYCKAN 313
+ + N L+ F K G+ EA +F+E+ D A PN ++ + +++ K
Sbjct: 352 KFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMG 411
Query: 314 ELDQAL----KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
E +A+ KV + +K Y +I+ + C+ G + +A + E + + AD
Sbjct: 412 EFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADA 471
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGL----------------------------- 400
+ +I+AY K + A+K ++M++ L
Sbjct: 472 PSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTK 531
Query: 401 ------KPDPFTYKALIHGFCKMDELESAKELLFGML 431
KPDP Y ++ G C D L+ AK+++ M+
Sbjct: 532 MGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMI 568
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/445 (18%), Positives = 166/445 (37%), Gaps = 61/445 (13%)
Query: 159 PHLPACTVLL-----------SSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACS 207
P LP T L SL++ + K+ ++ V ++ N +I A
Sbjct: 132 PRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMY 191
Query: 208 KSRDVERAKQLLNEM-EEKGVVPDIFTYNTLISLYCKKGMHYEALSI-QDKMEREGINLD 265
+++ + L ++ +VP++ +YN +I+ +C +G EAL + + +
Sbjct: 192 RAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPS 251
Query: 266 IVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRE 323
V+Y L G + GR+ +A + E+ K + Y LI GY + D+A++ +
Sbjct: 252 SVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFD 311
Query: 324 LMEAK-GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKI 382
+++K +Y G+ + + + G ++A + + +KK + T N L+ + K
Sbjct: 312 ELKSKCTVYDGIVNA-TFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKF 370
Query: 383 GDLKSALKFKNKMLESGLKPD--------------------------------------- 403
G A N+ML++ P+
Sbjct: 371 GKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSK 430
Query: 404 PFT-----YKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAI 458
PF Y ++ FC+ L A+ + S+ ++D Y K + +D
Sbjct: 431 PFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDA 490
Query: 459 LALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
+ + D + L + A + L K ++ + ++ M D IY +
Sbjct: 491 VKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRG 550
Query: 519 YWKSGKTSVASNVLEEMAKRRLIIT 543
A +++ EM + + +T
Sbjct: 551 LCDGDALDQAKDIVGEMIRHNVGVT 575
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 107/252 (42%), Gaps = 11/252 (4%)
Query: 143 QDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC- 201
++A++ + + + + H P VLL LK G + W + ++ + NI N
Sbjct: 339 KEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSD 398
Query: 202 ----LIHACSK----SRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
+++ C K S + K++ +++ K V D Y +++ +C++GM EA
Sbjct: 399 TVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERF 458
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVT-YTTLIDG-YCK 311
+ + D S+ ++I + K R+ +A +M + D V + + G K
Sbjct: 459 FAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIK 518
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
+L ++ +V M + P + Y+ ++R LC + A ++ EM V +
Sbjct: 519 NGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVL 578
Query: 372 CNTLINAYSKIG 383
+I + K G
Sbjct: 579 REFIIEVFEKAG 590
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 136/310 (43%), Gaps = 13/310 (4%)
Query: 122 PEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
P ++ V W L+ Y + L +F M P + + + +
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
H + G + N+++ N L+ S+ R + A+++ +EM V D+ ++N++I
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS----VWDVVSWNSIIE 201
Query: 240 LYCKKGMHYEALSIQDKMERE-GINLDIVSYNSLIYGFCKEGRMREATRM--FSEIKDAT 296
Y K G AL + +M E G D ++ +++ G ++ F+ +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261
Query: 297 PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
N L+D Y K +D+A V M K V ++N+++ Q GR DA +L
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD----VVSWNAMVAGYSQIGRFEDAVRL 317
Query: 357 LNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
+M E+K++ D +T + I+ Y++ G AL +ML SG+KP+ T +++ G
Sbjct: 318 FEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377
Query: 417 MDELESAKEL 426
+ L KE+
Sbjct: 378 VGALMHGKEI 387
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 146/320 (45%), Gaps = 34/320 (10%)
Query: 128 VLSW--LVIHYAKSRMTQDALQVFEQM-RLYQLKPH-------LPACTVLLSSLLKDGTT 177
V+SW ++ YAK + AL++F +M + +P LP C L GT
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL-------GTH 245
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
++ ++H V ++ N+++ NCL+ +K ++ A + + M V D+ ++N +
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS----VKDVVSWNAM 301
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-- 295
++ Y + G +A+ + +KM+ E I +D+V++++ I G+ + G EA + ++ +
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 296 TPNHVTYTTLIDGYCKANELDQ-------ALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
PN VT +++ G L A+K + G N ++ +
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG--LKPDPFT 406
++ A + + +S K + D +T +I YS+ GD AL+ ++M E +P+ FT
Sbjct: 422 KVDTARAMFDSLSPK--ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 407 YKALIHGFCKMDELESAKEL 426
+ + L K++
Sbjct: 480 ISCALVACASLAALRIGKQI 499
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 137/335 (40%), Gaps = 41/335 (12%)
Query: 80 MIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVI--HYA 137
+I + AK K TA+ M D ++ ++ V++W V+ Y+
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKE---------------------RDVVTWTVMIGGYS 451
Query: 138 KSRMTQDALQVFEQM--RLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK---RLVQDGV 192
+ AL++ +M Q +P+ + L + + +IH R Q+ V
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 193 VLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
L ++ NCLI +K + A+ + + M K V T+ +L++ Y G EAL
Sbjct: 512 PL--FVSNCLIDMYAKCGSISDARLVFDNMMAKNEV----TWTSLMTGYGMHGYGEEALG 565
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK---DATPNHVTYTTLIDGY 309
I D+M R G LD V+ ++Y G + + F+ +K +P Y L+D
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL 625
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
+A L+ AL+ L+E + P + + L G++ +++E D
Sbjct: 626 GRAGRLNAALR---LIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDG 682
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDP 404
+ L N Y+ G K + ++ M G+K P
Sbjct: 683 -SYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRP 716
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 16/329 (4%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
N+++YN L R+ +L M V P +TY++L+ E S+Q
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGE--SLQ 892
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANE 314
+ + G + +LI + GR+REA ++F E+ + + + +TT++ Y + +
Sbjct: 893 AHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER--DDIAWTTMVSAYRRVLD 950
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNT 374
+D A + M K AT N ++ G + A L N+M K D I+ T
Sbjct: 951 MDSANSLANQMSEKN----EATSNCLINGYMGLGNLEQAESLFNQMPVK----DIISWTT 1002
Query: 375 LINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG 434
+I YS+ + A+ KM+E G+ PD T +I + LE KE+ L G
Sbjct: 1003 MIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNG 1062
Query: 435 FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAE 494
F S +VD Y K +++ L + K L + ++I L + A
Sbjct: 1063 FVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF----CWNSIIEGLAAHGFAQEAL 1118
Query: 495 KLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
K+F ME + ++V + S+ A +G
Sbjct: 1119 KMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 146/319 (45%), Gaps = 26/319 (8%)
Query: 128 VLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK 185
++SW ++ Y++++ ++A+ VF +M + P + ++S+ G + ++H
Sbjct: 997 IISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHM 1056
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
+Q+G VL++YI + L+ SK +ERA + + +K ++F +N++I G
Sbjct: 1057 YTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWNSIIEGLAAHG 1112
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD---ATPNHVTY 302
EAL + KME E + + V++ S+ G + E R++ + D N Y
Sbjct: 1113 FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY 1172
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
++ + KA + +AL++ ME P + ++L DG N ++ E++
Sbjct: 1173 GGMVHLFSKAGLIYEALELIGNME---FEPNAVIWGALL-----DGCRIHKNLVIAEIAF 1224
Query: 363 KKVQADNITCNT----LINAYSKIGDLKSALKFKNKMLESGL-KPDPFTYKALI----HG 413
K+ + L++ Y++ + + + +M E G+ K P T I H
Sbjct: 1225 NKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHL 1284
Query: 414 FCKMDELESAKELLFGMLD 432
F D+ SA + + +LD
Sbjct: 1285 FAAADKSHSASDEVCLLLD 1303
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 105/240 (43%), Gaps = 7/240 (2%)
Query: 193 VLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
V +I + +I S+++ A + +M E+G++PD T +T+IS G+
Sbjct: 994 VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKE 1053
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKA 312
+ + G LD+ ++L+ + K G + A +F + N + ++I+G
Sbjct: 1054 VHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK--NLFCWNSIIEGLAAH 1111
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT- 371
+ALK+ ME + + P T+ S+ G + + ++ M + N+
Sbjct: 1112 GFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEH 1171
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
+++ +SK G + AL+ M +P+ + AL+ G C++ + E+ F L
Sbjct: 1172 YGGMVHLFSKAGLIYEALELIGNM---EFEPNAVIWGALLDG-CRIHKNLVIAEIAFNKL 1227
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 151/394 (38%), Gaps = 53/394 (13%)
Query: 57 SFPFFKWVESTPHYTHSLQCSWAMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXX 116
S FF W S P YT + + + LA +K +++ ++L ++ +D
Sbjct: 94 SLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQM--KDLSL--------- 142
Query: 117 RIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
+++ + L +++ Y K+ A+++F +G
Sbjct: 143 ------DISGETLCFIIEQYGKNGHVDQAVELF------------------------NGV 172
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
+ G + +YN L+HA + A L+ M KG+ PD TY
Sbjct: 173 PKTL----------GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAI 222
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA- 295
L++ +C G EA D+M R G N + LI G G + A M S++
Sbjct: 223 LVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGG 282
Query: 296 -TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
P+ T+ LI+ K+ E++ +++ GL + TY +++ + + G+I +A
Sbjct: 283 FVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAF 342
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
+LLN E + +I + G A F + M P+ Y LI
Sbjct: 343 RLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMC 402
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
+ + A L M + G P + + DG
Sbjct: 403 GRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDG 436
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 1/258 (0%)
Query: 301 TYTTLIDGYCKANELDQALKV-RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
T +I+ Y K +DQA+++ + + G V YNS+L LC A L+
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDE 419
M K ++ D T L+N + G +K A +F ++M G P LI G
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 420 LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRA 479
LESAKE++ M GF P +++ +++ K V+ + + GLC+D Y+
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKT 327
Query: 480 LIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRR 539
LI + KI +I+ A +L + +G +Y + ++G A + +M +
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 540 LIITAKIYSCFSVPDGHG 557
+Y+ G G
Sbjct: 388 HPPNRPVYTMLITMCGRG 405
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 119/288 (41%), Gaps = 7/288 (2%)
Query: 272 LIYGFCKEGRMREATRMFSEIKDATPNHVT---YTTLIDGYCKANELDQALKVRELMEAK 328
+I + K G + +A +F+ + T Y +L+ C A + M K
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 329 GLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSA 388
GL P TY ++ C G++++A + L+EMS + + LI G L+SA
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 389 LKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDG 448
+ +KM + G PD T+ LI K E+E E+ + G +Y ++
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 449 YCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGD 508
K +D L + + G S+Y +I+ +C+ + A F M+ +
Sbjct: 332 VSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPN 391
Query: 509 SVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFS-VPDG 555
+YT L + GK A+N L EM + L+ I CF V DG
Sbjct: 392 RPVYTMLITMCGRGGKFVDAANYLVEMTEMGLV---PISRCFDMVTDG 436
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 2/227 (0%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
+ + + LV + + ++A + ++M P +L+ LL G ++
Sbjct: 216 DKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMV 275
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
++ + G V +I +N LI A SKS +VE ++ + G+ DI TY TLI K
Sbjct: 276 SKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKI 335
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTY 302
G EA + + +G Y +I G C+ G +A FS+ +K PN Y
Sbjct: 336 GKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVY 395
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGR 349
T LI + + A M GL P ++ + L G+
Sbjct: 396 TMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGK 442
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 161/346 (46%), Gaps = 46/346 (13%)
Query: 129 LSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKR 186
SW LV ++ R ++ + V+ M + P A T +L + K IH +
Sbjct: 70 FSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQ 129
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
+++G+ +Y+ L+ S+ +E AK+ +++ EK V ++N+L+ Y + G
Sbjct: 130 ALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTV----SWNSLLHGYLESGE 185
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS---------------- 290
EA + DK+ + D VS+N +I + K+G M A +FS
Sbjct: 186 LDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGG 241
Query: 291 -----EIK------DATP--NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATY 337
E+K DA P N V++ T+I GY K ++ A ++ LM K Y
Sbjct: 242 YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKL----VY 297
Query: 338 NSILRKLCQDGRIRDANKLLNEMSEKK--VQADNITCNTLINAYSKIGDLKSALKFKNKM 395
++++ Q+G+ +DA KL +M E+ +Q D IT +++++A S++G+ ++ +
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 396 LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCS 441
E G+K D +LI + K + A + +F L+ T SY +
Sbjct: 358 TEHGIKIDDLLSTSLIDLYMKGGDFAKAFK-MFSNLNKKDTVSYSA 402
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 157/355 (44%), Gaps = 30/355 (8%)
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG-MHYE 249
G+ + + ++ AC K ++ K + + + G+ ++ L+ LY + G +
Sbjct: 99 GIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELA 158
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLID 307
+ D E+ + VS+NSL++G+ + G + EA R+F +I KDA V++ +I
Sbjct: 159 KKAFDDIAEK-----NTVSWNSLLHGYLESGELDEARRVFDKIPEKDA----VSWNLIIS 209
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
Y K ++ A + M K A++N ++ ++ A + M +K
Sbjct: 210 SYAKKGDMGNACSLFSAMPLK----SPASWNILIGGYVNCREMKLARTYFDAMPQK---- 261
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
+ ++ T+I+ Y+K+GD++SA + M K D Y A+I + + + + A +L
Sbjct: 262 NGVSWITMISGYTKLGDVQSAEELFRLM----SKKDKLVYDAMIACYTQNGKPKDALKLF 317
Query: 428 FGMLDAG--FTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
ML+ P + S +V + N + G+ +D + +LI
Sbjct: 318 AQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYM 377
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
K A K+F ++ D+V Y+++ +G + A+++ M ++++
Sbjct: 378 KGGDFAKAFKMFSNLNKK----DTVSYSAMIMGCGINGMATEANSLFTAMIEKKI 428
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 12/233 (5%)
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM-ERE 260
+I +K DV+ A++L M +K D Y+ +I+ Y + G +AL + +M ER
Sbjct: 269 MISGYTKLGDVQSAEELFRLMSKK----DKLVYDAMIACYTQNGKPKDALKLFAQMLERN 324
Query: 261 G-INLDIVSYNSLIYGFCKEGRMREATRMFSEIKD--ATPNHVTYTTLIDGYCKANELDQ 317
I D ++ +S++ + G T + S I + + + T+LID Y K + +
Sbjct: 325 SYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAK 384
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
A K+ + K +Y++++ +G +AN L M EKK+ + +T L++
Sbjct: 385 AFKMFSNLNKKD----TVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLS 440
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
AYS G ++ K N M + L+P Y ++ + LE A EL+ M
Sbjct: 441 AYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSM 493
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 183/414 (44%), Gaps = 32/414 (7%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y K + DA Q+F+QM + ++ + T ++S+ K ++ +++D
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMP----QRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
V N+Y Y+ ++ +C+ DV + L + ++G+ D+F + LI ++ K G +AL
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGY 309
S+ D+M + D + +NS+I GF + R A +F +K A T T+++
Sbjct: 215 SVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
L+ ++ + + N+++ C+ G + DA ++ N+M E+ V
Sbjct: 271 TGLALLELGMQAH--VHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDV---- 324
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
IT +T+I+ ++ G + ALK +M SG KP+ T ++ LE
Sbjct: 325 ITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRS 384
Query: 430 MLDA-GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIE 488
M G P Y ++D K +D + L +E + DA +R L+ C+++
Sbjct: 385 MKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEP---DAVTWRTLLGA-CRVQ 440
Query: 489 Q----IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
+ E A K ++ D+ YT L+ Y S K + M R
Sbjct: 441 RNMVLAEYAAKKVIALDPE----DAGTYTLLSNIYANSQKWDSVEEIRTRMRDR 490
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 152/332 (45%), Gaps = 20/332 (6%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
I + E + V S L+ +AK +DAL VF++M + ++ ++ +
Sbjct: 186 IKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRS 241
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
+V ++ KR+ + G + ++ AC+ +E Q + + D+ N L
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNAL 299
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA-- 295
+ +YCK G +AL + ++M+ D+++++++I G + G +EA ++F +K +
Sbjct: 300 VDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Query: 296 TPNHVTYTTLIDGYCKANEL-DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
PN++T ++ A L D R + + G+ P Y ++ L + G++ DA
Sbjct: 356 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 415
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKP-DPFTYKALIHG 413
KLLNEM + + D +T TL+ A ++ A K++ L P D TY L +
Sbjct: 416 KLLNEM---ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVI--ALDPEDAGTYTLLSNI 470
Query: 414 FCKMDELESAKELLFGMLDAGFTPSYCSYSWI 445
+ + +S +E+ M D G SWI
Sbjct: 471 YANSQKWDSVEEIRTRMRDRGIKKEP-GCSWI 501
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 149/331 (45%), Gaps = 25/331 (7%)
Query: 210 RDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSY 269
RD+ RA + ++ ++ G+ D TY+ LI +E I + G +
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLV 99
Query: 270 NSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKG 329
N LI + K + +A ++F ++ N +++TT+I Y K +AL++ LM
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQR--NVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 330 LYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSAL 389
+ P V TY+S+LR C + D L + ++ +++D + LI+ ++K+G+ + AL
Sbjct: 158 VRPNVYTYSSVLRS-CNG--MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 390 KFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGY 449
++M+ D + ++I GF + + A EL M AGF + + ++
Sbjct: 215 SVFDEMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRA- 269
Query: 450 CKKDNVDAILALPDEFLSKGLCL-----DASVYRALIRRLCKIEQIECAEKLFYHMEGNG 504
C LAL + + + + D + AL+ CK +E A ++F M+
Sbjct: 270 CTG------LALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK--- 320
Query: 505 ISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
D + ++++ ++G + A + E M
Sbjct: 321 -ERDVITWSTMISGLAQNGYSQEALKLFERM 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 106/232 (45%), Gaps = 11/232 (4%)
Query: 310 CKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADN 369
C +L +A+K + +++ GL+ ATY+ +++ + + + N + + +
Sbjct: 37 CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
N LIN Y K L A + ++M + + ++ +I + K + A ELL
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNV----ISWTTMISAYSKCKIHQKALELLVL 152
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
ML P+ +YS ++ C + + + L + +GL D V ALI K+ +
Sbjct: 153 MLRDNVRPNVYTYSSVLRS-C--NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 490 IECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLI 541
E A +F M ++GD++++ S+ + ++ ++ VA + + M + I
Sbjct: 210 PEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 14/265 (5%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
N+Y +N ++ KS + RA+ + + M E+ D+ ++NT++ Y + G +EAL
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 255 DKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKA 312
+ R GI + S+ L+ K +++ + ++ A N V ++ID Y K
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
+++ A + + M K ++ + +++ + G + A KL EM EK + ++
Sbjct: 228 GQMESAKRCFDEMTVKDIH----IWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSW 279
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
LI Y + G AL KM+ G+KP+ FT+ + + + L KE+ M+
Sbjct: 280 TALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIR 339
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDA 457
P+ S ++D Y K +++A
Sbjct: 340 TNVRPNAIVISSLIDMYSKSGSLEA 364
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 12/261 (4%)
Query: 130 SW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
SW +V Y KS M A VF+ M + + + ++ +DG + +K
Sbjct: 115 SWNNMVSGYVKSGMLVRARVVFDSMP----ERDVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
+ G+ N + + L+ AC KSR ++ +Q ++ G + ++ ++I Y K G
Sbjct: 171 RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLID 307
A D+M + I++ + +LI G+ K G M A ++F E+ + P V++T LI
Sbjct: 231 ESAKRCFDEMTVKDIHI----WTTLISGYAKLGDMEAAEKLFCEMPEKNP--VSWTALIA 284
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQA 367
GY + ++AL + M A G+ P T++S L +R ++ M V+
Sbjct: 285 GYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRP 344
Query: 368 DNITCNTLINAYSKIGDLKSA 388
+ I ++LI+ YSK G L+++
Sbjct: 345 NAIVISSLIDMYSKSGSLEAS 365
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 160/384 (41%), Gaps = 41/384 (10%)
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGV-VPDIFTYNTLISLYCKKG 245
L Q G+ L + L+ C ++ +++ K + ++ G P+ N LI +Y K G
Sbjct: 37 LTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCG 96
Query: 246 MHYEALSIQDKMEREGI---------------------------NLDIVSYNSLIYGFCK 278
+A + D+M + D+VS+N+++ G+ +
Sbjct: 97 KPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQ 156
Query: 279 EGRMREATRMFSEIKDATP--NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVAT 336
+G + EA + E + + N ++ L+ K+ +L + + G V
Sbjct: 157 DGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVL 216
Query: 337 YNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKML 396
SI+ + G++ A + +EM+ K + TLI+ Y+K+GD+++A K +M
Sbjct: 217 SCSIIDAYAKCGQMESAKRCFDEMTVKDIH----IWTTLISGYAKLGDMEAAEKLFCEMP 272
Query: 397 ESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
E +P ++ ALI G+ + A +L M+ G P ++S + ++
Sbjct: 273 EK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLR 328
Query: 457 AILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLA 516
+ + + +A V +LI K +E +E++F + D V + ++
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK---HDCVFWNTMI 385
Query: 517 YAYWKSGKTSVASNVLEEMAKRRL 540
A + G A +L++M K R+
Sbjct: 386 SALAQHGLGHKALRMLDDMIKFRV 409
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 139/309 (44%), Gaps = 21/309 (6%)
Query: 231 IFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFS 290
I + +S + K +A+S + + ++GI L SL+ +++ +
Sbjct: 11 ICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHR 70
Query: 291 EIKDA---TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD 347
+K PN + LI Y K + A KV + M + LY ++N+++ +
Sbjct: 71 HLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLY----SWNNMVSGYVKS 126
Query: 348 GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
G + A + + M E+ D ++ NT++ Y++ G+L AL F + SG+K + F++
Sbjct: 127 GMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 408 KALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLS 467
L+ K +L+ ++ +L AGF + I+D Y K +++ DE
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 468 KGLCLDASVYRALIRRLCKIEQIECAEKLFYHM-EGNGISGDSVIYTSLAYAYWKSGKTS 526
K D ++ LI K+ +E AEKLF M E N +S +T+L Y + G +
Sbjct: 243 K----DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVS-----WTALIAGYVRQGSGN 293
Query: 527 VASNVLEEM 535
A ++ +M
Sbjct: 294 RALDLFRKM 302
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 153/325 (47%), Gaps = 21/325 (6%)
Query: 127 QVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKR 186
+V + L+ Y+K + + VF QM + ++ + T ++SS D + I
Sbjct: 312 EVGNILMSRYSKCGVLEAVKSVFHQMS----ERNVVSWTTMISSNKDDAVS-----IFLN 362
Query: 187 LVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGM 246
+ DGV N + LI+A + ++ ++ + G V + N+ I+LY K
Sbjct: 363 MRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK--- 419
Query: 247 HYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMF-SEIKDATPNHVTYTTL 305
+EAL K + +I+S+N++I GF + G EA +MF S + PN T+ ++
Sbjct: 420 -FEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSV 478
Query: 306 IDGYCKANELD--QALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
++ A ++ Q + + GL +++L + G I ++ K+ NEMS+K
Sbjct: 479 LNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK 538
Query: 364 KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESA 423
+ ++I+AYS GD ++ + +KM++ + PD T+ +++ + ++
Sbjct: 539 ----NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKG 594
Query: 424 KELLFGMLDA-GFTPSYCSYSWIVD 447
E+ M++ PS+ YS +VD
Sbjct: 595 YEIFNMMIEVYNLEPSHEHYSCMVD 619
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 191/458 (41%), Gaps = 48/458 (10%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV-VWKIHKRLVQD 190
+ Y++S + A +VF++M + + LLS L ++GT I + ++++
Sbjct: 215 FITMYSRSGSFRGARRVFDEMSF----KDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE 270
Query: 191 GVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA 250
GV L+ + +I C D++ A+Q+ ++G + N L+S Y K G+
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330
Query: 251 LSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDG 308
S+ +M ++VS+ ++I +A +F ++ PN VT+ LI+
Sbjct: 331 KSVFHQMSER----NVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINA 381
Query: 309 YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQAD 368
++ + LK+ L G + NS + + + DA K +++ +++
Sbjct: 382 VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREI--- 438
Query: 369 NITCNTLINAYSKIGDLKSALK-FKNKMLESGLKPDPFTYKALIH--GFCKMDELESAKE 425
I+ N +I+ +++ G ALK F + E+ P+ +T+ ++++ F + ++ +
Sbjct: 439 -ISWNAMISGFAQNGFSHEALKMFLSAAAET--MPNEYTFGSVLNAIAFAEDISVKQGQR 495
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+L G S ++D Y K+ N+D + +E K + V+ ++I
Sbjct: 496 CHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK----NQFVWTSIISAYS 551
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK-RRLIITA 544
E LF+ M ++ D V + S+ A + G + M + L +
Sbjct: 552 SHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSH 611
Query: 545 KIYSCF------------------SVPDGHGENKVSQM 564
+ YSC VP G GE+ + M
Sbjct: 612 EHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSM 649
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 159/417 (38%), Gaps = 84/417 (20%)
Query: 211 DVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYN 270
D + A + M+ GVV D FTY+T +S L +Q + + G+ D+V N
Sbjct: 154 DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGN 213
Query: 271 SLIYGFCKEGRMREATRMFSEI--KDATP------------------------------- 297
S I + + G R A R+F E+ KD
Sbjct: 214 SFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE 273
Query: 298 -NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKL 356
+HV++T++I C +L A ++ L +G + N ++ + + G + +
Sbjct: 274 LDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSV 333
Query: 357 LNEMSEKKVQA--------------------------DNITCNTLINAYSKIGDLKSALK 390
++MSE+ V + + +T LINA +K LK
Sbjct: 334 FHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK 393
Query: 391 FKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYC 450
+++G +P + I + K + LE AK+ D F S++ ++ G+
Sbjct: 394 IHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKK---AFEDITFRE-IISWNAMISGFA 449
Query: 451 KKDNVDAIL---------ALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHME 501
+ L +P+E+ + G L+A + I ++ ++ H+
Sbjct: 450 QNGFSHEALKMFLSAAAETMPNEY-TFGSVLNAIAFAEDI-------SVKQGQRCHAHLL 501
Query: 502 GNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGE 558
G++ V+ ++L Y K G + V EM+++ + I S +S HG+
Sbjct: 502 KLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYS---SHGD 555
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 113/237 (47%), Gaps = 31/237 (13%)
Query: 201 CL-IHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER 259
CL + AC D++R Q+ G + N ++ +Y K G AL I + +
Sbjct: 82 CLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENL-- 137
Query: 260 EGINLDIVSYNSLIYGFCKEG-------RMREATRMFSEIKDATPNHVTYTTLIDGYCKA 312
++ D+VS+N+++ GF RM+ A +F DA TY+T + +C
Sbjct: 138 --VDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVF----DA----FTYSTALS-FCVG 186
Query: 313 NE-LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
+E L+++ + GL + NS + + G R A ++ +EMS K D I+
Sbjct: 187 SEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK----DMIS 242
Query: 372 CNTLINAYSKIG--DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
N+L++ S+ G ++ + F++ M E G++ D ++ ++I C +L+ A+++
Sbjct: 243 WNSLLSGLSQEGTFGFEAVVIFRDMMRE-GVELDHVSFTSVITTCCHETDLKLARQI 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 52/255 (20%)
Query: 157 LKPHLPACTVLLSSLL----KDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDV 212
LK L +C V+ S+LL K G + K+ + Q N +++ +I A S D
Sbjct: 501 LKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK----NQFVWTSIISAYSSHGDF 556
Query: 213 ERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSL 272
E L ++M ++ V PD+ T+ ++++ +KGM + I +N +
Sbjct: 557 ETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEI---------------FNMM 601
Query: 273 IYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYP 332
I E+ + P+H Y+ ++D +A L +A ELM P
Sbjct: 602 I-----------------EVYNLEPSHEHYSCMVDMLGRAGRLKEA---EELMSEVPGGP 641
Query: 333 GVATYNSILRKLCQDGRIRDANKLLN-------EMSEKKVQADNITCNTLINAYSKIGDL 385
G + S+L G ++ K+ E+S VQ NI + K ++
Sbjct: 642 GESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEK--EEWDKAAEI 699
Query: 386 KSALKFKNKMLESGL 400
+ A++ KN E+G
Sbjct: 700 RKAMRKKNVSKEAGF 714
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 202/460 (43%), Gaps = 69/460 (15%)
Query: 122 PEVNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNV 179
PE N V+SW ++ YA+S AL++F++M + ++ + ++ +L++ G +
Sbjct: 136 PERN--VVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDE 189
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
+ +R+ + VV + ++ +K+ V+ A++L + M E+ +I ++N +I+
Sbjct: 190 AMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMIT 241
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNH 299
Y + EA D++ + D S+N++I GF + M +A +F + + N
Sbjct: 242 GYAQNNRIDEA----DQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPE--KNV 295
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKG-LYPGVATYNSILRKLCQDGRIRDANKLLN 358
+++TT+I GY + E ++AL V M G + P V TY SIL + + ++
Sbjct: 296 ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ 355
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDL--------------------------------- 385
+S+ Q + I + L+N YSK G+L
Sbjct: 356 LISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHG 415
Query: 386 KSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML-DAGFTPSYCSYSW 444
K A++ N+M + G KP TY L+ +E E ++ D Y+
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTC 475
Query: 445 IVDGYCKK----DNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHM 500
+VD C + +V + D LS+ S Y A++ ++ A+++ +
Sbjct: 476 LVD-LCGRAGRLKDVTNFINCDDARLSR------SFYGAILSACNVHNEVSIAKEVVKKV 528
Query: 501 EGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL 540
G S D+ Y ++ Y +GK A+ + +M ++ L
Sbjct: 529 LETG-SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGL 567
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/449 (19%), Positives = 209/449 (46%), Gaps = 41/449 (9%)
Query: 124 VNSQVLSWLVIHYAKSRM-----TQDALQVFEQMR-LYQL--KPHLPACTVLLSSLLKDG 175
+ S+ LS L +Y +S + ++Q+F +R +Y +P +P L+ L K G
Sbjct: 1 MQSRALSRLRSYYKRSSVFPSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVG 60
Query: 176 TTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYN 235
K+ L + VV ++ I K D+ A++L + ++ + ++ T+
Sbjct: 61 KIAEARKLFDGLPERDVVTWTHVITGYI----KLGDMREARELFDRVDSR---KNVVTWT 113
Query: 236 TLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA 295
++S Y + + LSI + + +E ++VS+N++I G+ + GR+ +A +F E+ +
Sbjct: 114 AMVSGYLRS----KQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 296 TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANK 355
N V++ +++ + +D+A+ + E M + V ++ +++ L ++G++ +A +
Sbjct: 170 --NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARR 223
Query: 356 LLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFC 415
L + M E+ + I+ N +I Y++ + A + M E D ++ +I GF
Sbjct: 224 LFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFI 275
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCK-KDNVDAILALPDEFLSKGLCLDA 474
+ E+ A G+ D + S++ ++ GY + K+N +A+ + +
Sbjct: 276 RNREMNKA----CGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNV 331
Query: 475 SVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEE 534
Y +++ + + +++ + + + ++ ++L Y KSG+ A + +
Sbjct: 332 GTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDN 391
Query: 535 --MAKRRLIITAKIYSCFSVPDGHGENKV 561
+ +R LI + + ++ GHG+ +
Sbjct: 392 GLVCQRDLISWNSMIAVYA-HHGHGKEAI 419
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 148/345 (42%), Gaps = 25/345 (7%)
Query: 77 SW-AMIQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHD--------DPEVNSQ 127
SW AMI A+ A Q+ + RDF R + D
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 128 VLSW--LVIHYAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
V+SW ++ Y +++ ++AL VF +M R +KP++ +LS+ +IH
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVV--PDIFTYNTLISLYC 242
+ + + N + + L++ SKS ++ A+++ + G+V D+ ++N++I++Y
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMF----DNGLVCQRDLISWNSMIAVYA 410
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATP-NH 299
G EA+ + ++M + G V+Y +L++ G + + F ++ ++ P
Sbjct: 411 HHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLRE 470
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
YT L+D +A L V + + Y +IL + A +++ +
Sbjct: 471 EHYTCLVDLCGRAGRLKD---VTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKK 527
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDP 404
+ E D T + N Y+ G + A + + KM E GLK P
Sbjct: 528 VLETG-SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQP 571
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 196/458 (42%), Gaps = 59/458 (12%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
PE N + L+ Y + + A+++F + R LK L + ++
Sbjct: 109 PERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE 168
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
+H +V +G+ +++ N LI SK +++A L + +E+ D ++N+LIS Y
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER----DQVSWNSLISGY 224
Query: 242 CKKGMHYEALSIQDKMEREGINL------------------------------------- 264
+ G E L++ KM R+G+NL
Sbjct: 225 VRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGME 284
Query: 265 -DIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANEL-----DQA 318
DIV +L+ + K G ++EA ++FS + + N VTY +I G+ + +E+ +A
Sbjct: 285 FDIVVRTALLDMYAKNGSLKEAIKLFSLMP--SKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 319 LKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM-SEKKVQADNITCNTLIN 377
K+ M+ +GL P +T+ S++ K C + + + ++ + + Q+D + LI
Sbjct: 343 FKLFMDMQRRGLEPSPSTF-SVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP 437
Y+ +G + + + S K D ++ ++I + ++LESA +L + + P
Sbjct: 402 LYALMGSTEDGM----QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRP 457
Query: 438 SYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLF 497
+ S ++ + + + + G+ SV + I K + A ++F
Sbjct: 458 EEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF 517
Query: 498 YHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
++ ++ S + +SLA + G + A N+ E M
Sbjct: 518 IEVQNPDVATYSAMISSLA----QHGSANEALNIFESM 551
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 121/283 (42%), Gaps = 55/283 (19%)
Query: 208 KSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIV 267
K R++ A+QL + M E+ +I ++N+LIS Y + G + +A+ + + + LD
Sbjct: 94 KCRELGFARQLFDRMPER----NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKF 149
Query: 268 SYNSLIYGFCKE------------------------------------GRMREATRMFSE 291
+Y + GFC E G++ +A +F
Sbjct: 150 TYAGAL-GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR 208
Query: 292 IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLC---QDG 348
+ + V++ +LI GY + ++ L + M GL S+L+ C +G
Sbjct: 209 CDE--RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEG 266
Query: 349 RIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
I + ++ ++ D + L++ Y+K G LK A+K + M + TY
Sbjct: 267 FIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV----VTYN 322
Query: 409 ALIHGFCKMDEL--ESAKE---LLFGMLDAGFTPSYCSYSWIV 446
A+I GF +MDE+ E++ E L M G PS ++S ++
Sbjct: 323 AMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVL 365
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 141/330 (42%), Gaps = 23/330 (6%)
Query: 128 VLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK 185
+ SW ++ + ++ + A +F Q+ ++P ++++S+ + +I
Sbjct: 424 IASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQG 483
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
++ G+ + I +KS ++ A Q+ E++ PD+ TY+ +IS + G
Sbjct: 484 YAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQN----PDVATYSAMISSLAQHG 539
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKD---ATPNHVTY 302
EAL+I + M+ GI + ++ ++ C G + + + F +K+ PN +
Sbjct: 540 SANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHF 599
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
T L+D + L A L+ + G T+ R L R+ + + ++E
Sbjct: 600 TCLVDLLGRTGRLSDA---ENLILSSGFQDHPVTW----RALLSSCRVYKDSVIGKRVAE 652
Query: 363 KKVQADNITCNTLI---NAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI----HGFC 415
+ ++ + + + N Y+ G SA + + M + G+K +P +I H F
Sbjct: 653 RLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFA 712
Query: 416 KMDELESAKELLFGMLDAGFTPSYCSYSWI 445
D + ++++ ML+ + Y+ +
Sbjct: 713 VADLSHPSSQMIYTMLETMDNVDFVDYTLV 742
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 179/410 (43%), Gaps = 45/410 (10%)
Query: 157 LKPHLPACTVLLS-SLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERA 215
L L CT LL S+ K +H R+++ G++ ++Y+ N L++ SK+ A
Sbjct: 9 LSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHA 68
Query: 216 KQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYG 275
++L +EM + F++NT++S Y K+G D++ + D VS+ ++I G
Sbjct: 69 RKLFDEMPLRTA----FSWNTVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMIVG 120
Query: 276 FCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPG 333
+ G+ +A R+ ++ + P T T ++ ++ KV + GL
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMS---------------------------EKKVQ 366
V+ NS+L + G A + + M E+ +
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 367 ADNITCNTLINAYSKIG-DLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKE 425
D +T N++I+ +++ G DL++ F + +S L PD FT +++ +++L K+
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 426 LLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLC 485
+ ++ GF S + ++ Y + V+ L ++ +K L ++ + AL+
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEG--FTALLDGYI 358
Query: 486 KIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
K+ + A+ +F ++ D V +T++ Y + G A N+ M
Sbjct: 359 KLGDMNQAKNIFVSLKDR----DVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 182/455 (40%), Gaps = 48/455 (10%)
Query: 145 ALQVFEQM-RLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLI 203
AL +F +M R L P +LS+ + +IH +V G ++ + N LI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 204 HACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEA----LSIQDKMER 259
S+ VE A++L+ + K + + FT L+ Y K G +A +S++D+
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFT--ALLDGYIKLGDMNQAKNIFVSLKDR--- 376
Query: 260 EGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYTTLIDGYCKANELDQ 317
D+V++ ++I G+ + G EA +F + PN T ++ L
Sbjct: 377 -----DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSH 431
Query: 318 ALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLIN 377
++ G V+ N+++ + G I A++ + + + + D ++ ++I
Sbjct: 432 GKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLI---RCERDTVSWTSMII 488
Query: 378 AYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAG-FT 436
A ++ G + AL+ ML GL+PD TY + + ++ M D
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII 548
Query: 437 PSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ-IE---- 491
P+ Y+ +VD + + +L EF+ K V + C++ + I+
Sbjct: 549 PTLSHYACMVDLFGRA----GLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKV 604
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRL--------IIT 543
AE+L N S Y++LA Y GK A+ + + M R+ I
Sbjct: 605 AAERLLLLEPEN-----SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Query: 544 AKIYSCFSVPDG-HGENKVSQM----FWDHVVERG 573
F V DG H E M WD + + G
Sbjct: 660 KHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 694
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/387 (18%), Positives = 155/387 (40%), Gaps = 36/387 (9%)
Query: 200 NCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER 259
N L + +KS A+ + + + G++ ++ N L+++Y K G A + D+M
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77
Query: 260 EGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQAL 319
S+N+++ + K G M F ++ + V++TT+I GY + +A+
Sbjct: 78 R----TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR--DSVSWTTMIVGYKNIGQYHKAI 131
Query: 320 KVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAY 379
+V M +G+ P T ++L + + K+ + + + ++ + N+L+N Y
Sbjct: 132 RVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Query: 380 SKIGDLKSALKFKNKML---------------------------ESGLKPDPFTYKALIH 412
+K GD A ++M+ E + D T+ ++I
Sbjct: 192 AKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251
Query: 413 GFCKMDELESAKELLFGML-DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLC 471
GF + A ++ ML D+ +P + + ++ + + + ++ G
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 472 LDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNV 531
+ V ALI + +E A +L + + +T+L Y K G + A N+
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEG--FTALLDGYIKLGDMNQAKNI 369
Query: 532 LEEMAKRRLIITAKIYSCFSVPDGHGE 558
+ R ++ + + +GE
Sbjct: 370 FVSLKDRDVVAWTAMIVGYEQHGSYGE 396
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 157/346 (45%), Gaps = 50/346 (14%)
Query: 195 NIYIYNCLIH---ACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
++ +N +I +C R +E A++L +EM + D F++NT+IS Y K EAL
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEAL 156
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE--IKDATPNHVTYTTLIDGY 309
+ +KM + VS++++I GFC+ G + A +F + +KD++P L+ G
Sbjct: 157 LLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGL 208
Query: 310 CKANELDQALKVRELMEAKGLYPG----VATYNSILRKLCQDGRIRDANKLLNEMSE--- 362
K L +A V L + L G V YN+++ Q G++ A L +++ +
Sbjct: 209 IKNERLSEAAWV--LGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCG 266
Query: 363 --------KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
++ + ++ N++I AY K+GD+ SA ++M + D ++ +I G+
Sbjct: 267 DDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGY 322
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSW--IVDGYCKKDNVDAILALPDEFLSKGLCL 472
+ +E A L M P+ ++SW +V GY NV+ L + K
Sbjct: 323 VHVSRMEDAFALFSEM------PNRDAHSWNMMVSGYASVGNVE----LARHYFEKTPEK 372
Query: 473 DASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYA 518
+ ++I K + + A LF M G D TSL A
Sbjct: 373 HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 137/299 (45%), Gaps = 35/299 (11%)
Query: 129 LSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKR 186
SW ++ YAK+R +AL +FE+M + + + + +++ ++G + + ++
Sbjct: 137 FSWNTMISGYAKNRRIGEALLLFEKMP----ERNAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 187 L-VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEE--KGVVPDIFTYNTLISLYCK 243
+ V+D L L+ K+ + A +L + G ++ YNTLI Y +
Sbjct: 193 MPVKDSSPLC-----ALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQ 247
Query: 244 KGMHYEALSIQDKME-----------REGINLDIVSYNSLIYGFCKEGRMREATRMFSEI 292
+G A + D++ RE ++VS+NS+I + K G + A +F ++
Sbjct: 248 RGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM 307
Query: 293 KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
KD + +++ T+IDGY + ++ A + M + + ++N ++ G +
Sbjct: 308 KDR--DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH----SWNMMVSGYASVGNVEL 361
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI 411
A + EK ++ N++I AY K D K A+ +M G KPDP T +L+
Sbjct: 362 ARHYFEKTPEKHT----VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL 416
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 156/359 (43%), Gaps = 42/359 (11%)
Query: 208 KSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIV 267
+S + A+ + ++E + V T+NT+IS Y K+ +A + D M + D+V
Sbjct: 52 RSGYIAEARDIFEKLEARNTV----TWNTMISGYVKRREMNQARKLFDVMPKR----DVV 103
Query: 268 SYNSLIYGFCKEGRMR---EATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVREL 324
++N++I G+ G +R EA ++F E+ + + ++ T+I GY K + +AL + E
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEM--PSRDSFSWNTMISGYAKNRRIGEALLLFEK 161
Query: 325 MEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGD 384
M + ++++++ CQ+G + A L +M K D+ L+ K
Sbjct: 162 MPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLCALVAGLIKNER 213
Query: 385 LKSALKFKNKM--LESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD-------AGF 435
L A + L SG + + Y LI G+ + ++E+A+ L + D F
Sbjct: 214 LSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 436 TPSYC----SYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIE 491
+C S++ ++ Y K +V + L D+ + D + +I + ++E
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRME 329
Query: 492 CAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCF 550
A LF M D+ + + Y G +A + E+ ++ + I + +
Sbjct: 330 DAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAY 384
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 100/203 (49%), Gaps = 7/203 (3%)
Query: 122 PEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
PE ++ + ++ Y K++ ++A+ +F +M + KP T LLS+ +
Sbjct: 370 PEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGM 429
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLY 241
++H+ +V+ V+ ++ ++N LI S+ ++ ++++ +EM+ K ++ T+N +I Y
Sbjct: 430 QMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLK---REVITWNAMIGGY 485
Query: 242 CKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA---TPN 298
G EAL++ M+ GI +++ S++ G + EA F + P
Sbjct: 486 AFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQ 545
Query: 299 HVTYTTLIDGYCKANELDQALKV 321
Y++L++ + ++A+ +
Sbjct: 546 MEHYSSLVNVTSGQGQFEEAMYI 568
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 156/322 (48%), Gaps = 42/322 (13%)
Query: 125 NSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
+ + SW +V Y + M +DA ++F++M ++ + L+S +K+G + K
Sbjct: 45 SKSISSWNSMVAGYFANLMPRDARKLFDEMP----DRNIISWNGLVSGYMKNGEIDEARK 100
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+ + + N+ + L+ + V+ A+ L +M EK V ++ ++ +
Sbjct: 101 VFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV----SWTVMLIGFL 152
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTY 302
+ G +A + + + + D ++ S+I+G CKEGR+ EA +F E+ + + +T+
Sbjct: 153 QDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV--ITW 206
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
TT++ GY + N +D A K+ ++M K ++ S+L Q+GRI DA +L M
Sbjct: 207 TTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPV 262
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALI-----HGFCKM 417
K V I CN +I+ + G++ A + + M E + +++ +I +GF
Sbjct: 263 KPV----IACNAMISGLGQKGEIAKARRVFDSMKER----NDASWQTVIKIHERNGF--- 311
Query: 418 DELESAKELLFGMLDAGFTPSY 439
ELE A +L M G P++
Sbjct: 312 -ELE-ALDLFILMQKQGVRPTF 331
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 142/306 (46%), Gaps = 30/306 (9%)
Query: 233 TYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI 292
T N I+ + G +EA + D + + I+ S+NS++ G+ R+A ++F E+
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSIS----SWNSMVAGYFANLMPRDARKLFDEM 74
Query: 293 KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRD 352
D N +++ L+ GY K E+D+A KV +LM + V ++ ++++ +G++
Sbjct: 75 PDR--NIISWNGLVSGYMKNGEIDEARKVFDLMPERN----VVSWTALVKGYVHNGKVDV 128
Query: 353 ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIH 412
A L +M EK + ++ ++ + + G + A K + + D ++IH
Sbjct: 129 AESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIH 180
Query: 413 GFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL 472
G CK ++ A+E+ M + S +++ +V GY + + VD + D K
Sbjct: 181 GLCKEGRVDEAREIFDEMSER----SVITWTTMVTGYGQNNRVDDARKIFDVMPEK---- 232
Query: 473 DASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVL 532
+ +++ + +IE AE+LF M + + + + L + G+ + A V
Sbjct: 233 TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLG----QKGEIAKARRVF 288
Query: 533 EEMAKR 538
+ M +R
Sbjct: 289 DSMKER 294
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 152/364 (41%), Gaps = 56/364 (15%)
Query: 79 AMIQILAKYKHFKTAQQMLDKIAHRD---FXXXXXXXXXXXRIHDD-------PEVNSQV 128
+MI L K A+++ D+++ R + R+ D PE
Sbjct: 177 SMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS 236
Query: 129 LSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLK--------------- 173
+ +++ Y ++ +DA ++FE M +KP + AC ++S L +
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVM---PVKPVI-ACNAMISGLGQKGEIAKARRVFDSMK 292
Query: 174 ---DGTTNVVWKIHKR-------------LVQDGVVLNIYIYNCLIHACSKSRDVERAKQ 217
D + V KIH+R + + GV ++ C+ + KQ
Sbjct: 293 ERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQ 352
Query: 218 LLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFC 277
+ ++ D++ + L+++Y K G ++ I D+ + DI+ +NS+I G+
Sbjct: 353 VHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK----DIIMWNSIISGYA 408
Query: 278 KEGRMREATRMFSEIK---DATPNHVTYTTLIDGYCKANELDQALKVRELMEAK-GLYPG 333
G EA ++F E+ PN VT+ + A +++ LK+ E ME+ G+ P
Sbjct: 409 SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPI 468
Query: 334 VATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKN 393
A Y ++ L + GR +A ++++ M+ V+ D +L+ A L A
Sbjct: 469 TAHYACMVDMLGRAGRFNEAMEMIDSMT---VEPDAAVWGSLLGACRTHSQLDVAEFCAK 525
Query: 394 KMLE 397
K++E
Sbjct: 526 KLIE 529
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 155/345 (44%), Gaps = 24/345 (6%)
Query: 195 NIYIYNCLIHACSK--SRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALS 252
N +N L+ SK SR +E A QL +E+ E PD F+YN ++S Y + +A S
Sbjct: 91 NTITWNSLLIGISKDPSRMME-AHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQS 145
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKA 312
D+M + D S+N++I G+ + G M +A +F + + N V++ +I GY +
Sbjct: 146 FFDRMPFK----DAASWNTMITGYARRGEMEKARELFYSMMEK--NEVSWNAMISGYIEC 199
Query: 313 NELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITC 372
+L++A ++ + GV + +++ + ++ A + +M+ V + +T
Sbjct: 200 GDLEKASHFFKVAPVR----GVVAWTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTW 252
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
N +I+ Y + + LK MLE G++P+ + + G ++ L+ +++ +
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 433 AGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIEC 492
+ + + ++ YCK + L + K D + A+I + +
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADK 368
Query: 493 AEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAK 537
A LF M N I D + + ++ A +G ++ E M +
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR 413
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 116/238 (48%), Gaps = 12/238 (5%)
Query: 128 VLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK 185
V++W ++ Y K++ + A +F+ M + +L ++S +++ K+ +
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFKDM---TVNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
++++G+ N + + CS+ ++ +Q+ + + + D+ +LIS+YCK G
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT--PNHVTYT 303
+A + + M+++ D+V++N++I G+ + G +A +F E+ D P+ +T+
Sbjct: 334 ELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389
Query: 304 TLIDGYCKANELDQALKVRELM-EAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM 360
++ A ++ + E M + P Y ++ L + G++ +A KL+ M
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD-GRIRDANKLLNEMSEKKVQADN 369
++ ++D AL+V M AK T+NS+L + +D R+ +A++L +E+ E D
Sbjct: 73 RSGDIDGALRVFHGMRAKN----TITWNSLLIGISKDPSRMMEAHQLFDEIPE----PDT 124
Query: 370 ITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFG 429
+ N +++ Y + + + A F ++M D ++ +I G+ + E+E A+EL +
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARELFYS 180
Query: 430 MLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQ 489
M++ + S++ ++ GY + +++ F + A+I K ++
Sbjct: 181 MMEK----NEVSWNAMISGYIECGDLEK----ASHFFKVAPVRGVVAWTAMITGYMKAKK 232
Query: 490 IECAEKLFYHMEGN 503
+E AE +F M N
Sbjct: 233 VELAEAMFKDMTVN 246
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 9/254 (3%)
Query: 195 NIYIYNCLIHACSKS-RDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
N Y +N +I + + D E A L M+ G+ PD FTYN + K S+
Sbjct: 95 NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKAN 313
+ + G+ D+ +SLI + K G++ A ++F EI + + V++ ++I GY +A
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER--DTVSWNSMISGYSEAG 212
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS-EKKVQADNITC 372
A+ + ME +G P T S+L G +R +LL EM+ KK+
Sbjct: 213 YAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLR-TGRLLEEMAITKKIGLSTFLG 271
Query: 373 NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLD 432
+ LI+ Y K GDL SA + N+M +K D + A+I + + + A +L F M
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 433 AGFTPSYCSYSWIV 446
G +P + S ++
Sbjct: 328 TGVSPDAGTLSTVL 341
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 120/248 (48%), Gaps = 14/248 (5%)
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+++R+ G+ + + YN + AC+K ++ + + + + + G+ D+ ++LI +Y
Sbjct: 119 LYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYA 178
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHV 300
K G A + D++ D VS+NS+I G+ + G ++A +F ++++ P+
Sbjct: 179 KCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDER 234
Query: 301 TYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATY--NSILRKLCQDGRIRDANKLLN 358
T +++ +L + E+ K + G++T+ + ++ + G + A ++ N
Sbjct: 235 TLVSMLGACSHLGDLRTGRLLEEMAITKKI--GLSTFLGSKLISMYGKCGDLDSARRVFN 292
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD 418
+M ++ D + +I YS+ G A K +M ++G+ PD T ++ +
Sbjct: 293 QM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 419 ELESAKEL 426
LE K++
Sbjct: 349 ALELGKQI 356
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 13/257 (5%)
Query: 130 SWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQ 189
S L+ Y K A +VF QM +K A T +++ ++G ++ +K+ + +
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
GV + + ++ AC +E KQ+ E + +I+ L+ +Y K G E
Sbjct: 328 TGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGY 309
AL + + M + + ++N++I + +G +EA +F + P+ +T+ ++
Sbjct: 388 ALRVFEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDRM-SVPPSDITFIGVLSAC 442
Query: 310 CKANELDQALK-VRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQAD 368
A + Q + E+ GL P + Y +I+ L + G + +A + + K D
Sbjct: 443 VHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK---PD 499
Query: 369 NITCNTLINAYSKIGDL 385
I ++ A K D+
Sbjct: 500 EIMLAAILGACHKRKDV 516
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 177/420 (42%), Gaps = 89/420 (21%)
Query: 195 NIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQ 254
N+ +N L+ K+R + A+ + M E+ VV ++ ++ Y ++GM EA S+
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV----SWTAMVKGYMQEGMVGEAESLF 133
Query: 255 DKM-EREGINL--------------------------DIVSYNSLIYGFCKEGRMREATR 287
+M ER ++ D+V+ ++I G C+EGR+ EA
Sbjct: 134 WRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARL 193
Query: 288 MFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD 347
+F E+++ N VT+TT+I GY + N +D A K+ E+M K ++ S+L
Sbjct: 194 IFDEMRER--NVVTWTTMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLS 247
Query: 348 GRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTY 407
GRI DA + M K V I CN +I + ++G++ A + + M + D T+
Sbjct: 248 GRIEDAEEFFEVMPMKPV----IACNAMIVGFGEVGEISKARRVFDLMEDR----DNATW 299
Query: 408 KALIHGFCKMD-ELESAKELLFGMLDAGFTPSYCS---------------YSWIVDGY-- 449
+ +I + + ELE A +L M G PS+ S Y V +
Sbjct: 300 RGMIKAYERKGFELE-ALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358
Query: 450 -CKKDN------------------VDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQI 490
C+ D+ V A L D F SK D ++ ++I
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVF-DRFSSK----DIIMWNSIISGYASHGLG 413
Query: 491 ECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLII-TAKIYSC 549
E A K+F+ M +G + V ++ A +GK + E M + + T + YSC
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 22/219 (10%)
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP 297
IS + G EA D ++ + I S+NS++ G+ G +EA ++F E+ +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIG----SWNSIVSGYFSNGLPKEARQLFDEMSER-- 77
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
N V++ L+ GY K + +A V ELM + V ++ ++++ Q+G + +A L
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 358 NEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKM 417
M E+ + ++ + G + A K + M D +I G C+
Sbjct: 134 WRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCRE 185
Query: 418 DELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVD 456
++ A+ L+F D + +++ ++ GY + + VD
Sbjct: 186 GRVDEAR-LIF---DEMRERNVVTWTTMITGYRQNNRVD 220
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 115/271 (42%), Gaps = 54/271 (19%)
Query: 200 NCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMER 259
N +I + ++ +A+++ + ME++ D T+ +I Y +KG EAL + +M++
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 260 EGIN------LDIVSY----NSLIYG-------------------------FCKEGRMRE 284
+G+ + I+S SL YG + K G + +
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 285 ATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKL 344
A +F ++ + + + ++I GY ++ALK+ M + G P T +IL
Sbjct: 385 AKLVFDRF--SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTAC 442
Query: 345 CQDGRIRDANKLLNEMSEK---KVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK 401
G++ + ++ M K ++ +C ++ + G + A++ M +K
Sbjct: 443 SYAGKLEEGLEIFESMESKFCVTPTVEHYSCT--VDMLGRAGQVDKAMELIESMT---IK 497
Query: 402 PDPFTYKALIHGFCK----MDELESAKELLF 428
PD + AL+ G CK +D E A + LF
Sbjct: 498 PDATVWGALL-GACKTHSRLDLAEVAAKKLF 527
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/513 (20%), Positives = 201/513 (39%), Gaps = 70/513 (13%)
Query: 34 VLSSTTIHQVLLQLSLNGYGPSISFPFFKWV-ESTPHYTHSLQCSWAMIQILAKYKHFKT 92
VL+ + + Q+L + P + F+ E P Y H+ MI IL K
Sbjct: 9 VLTPSLLSQILKKQK----NPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLE 64
Query: 93 AQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQM 152
+ +++++ D E V + ++ ++++ +DA+ +F+ +
Sbjct: 65 MKYVIERMKE-----------------DSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 153 RLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVV-LNIYIYNCLIHACSKSRD 211
+ + LL ++K+ I ++ V I N L+ +
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNR 167
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL----SIQDKMEREGINLDIV 267
+ A Q+ EM +G PD +Y L+ +C +G EA S+ ++ ++G DIV
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIV 227
Query: 268 SYNSLIYGFCKEGRMREAT-------------------------------------RMFS 290
Y L+ C G + +A R+ +
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 291 E--IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
E I+ A P +Y+ + + +L + +V M +KG P Y + ++ LC+ G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 349 RIRDANKLLN-EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES-GLKPDPFT 406
++++A ++N EM + N LI G A+ + KM + + T
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 407 YKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFL 466
Y+ L+ G C+ + A +++ ML P +Y ++ G C D + +E +
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMV 467
Query: 467 SKGLCLDASVYRALIRRL--CKIEQIECAEKLF 497
S+ + ++SV++AL + C I+ +E E L
Sbjct: 468 SQDMVPESSVWKALAESVCFCAIDVVEILEHLI 500
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 124/348 (35%), Gaps = 86/348 (24%)
Query: 285 ATRMFSEIKDATP----NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSI 340
A ++F E K+ P N Y T+ID K+N + + V E M+ + + S+
Sbjct: 28 ALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 341 LRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNK------ 394
+R + GR+ DA L + E +++ +TL+ K +L++A K
Sbjct: 88 IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWE 147
Query: 395 ------------------------------MLESGLKPDPFTYKALIHGFCKMDELESAK 424
M G PD +Y+ L+ GFC +LE A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 425 ELLFGML----DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL---------- 470
LL+ M G Y ++D C VD + + + L KGL
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 471 -----------------------------CLDASVYRALIRRLCKIEQIECAEKLFYHME 501
CLD+ Y A+ L + ++ E++ M
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDS--YSAMATDLFEEGKLVEGEEVLLAMR 325
Query: 502 GNGISGDSVIYTSLAYAYWKSGKTSVASNVL-EEMAKRRLIITAKIYS 548
G IY + A ++GK A +V+ +EM + + T +Y+
Sbjct: 326 SKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/513 (20%), Positives = 201/513 (39%), Gaps = 70/513 (13%)
Query: 34 VLSSTTIHQVLLQLSLNGYGPSISFPFFKWV-ESTPHYTHSLQCSWAMIQILAKYKHFKT 92
VL+ + + Q+L + P + F+ E P Y H+ MI IL K
Sbjct: 9 VLTPSLLSQILKKQK----NPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLE 64
Query: 93 AQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQM 152
+ +++++ D E V + ++ ++++ +DA+ +F+ +
Sbjct: 65 MKYVIERMKE-----------------DSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 153 RLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVV-LNIYIYNCLIHACSKSRD 211
+ + LL ++K+ I ++ V I N L+ +
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNR 167
Query: 212 VERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL----SIQDKMEREGINLDIV 267
+ A Q+ EM +G PD +Y L+ +C +G EA S+ ++ ++G DIV
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIV 227
Query: 268 SYNSLIYGFCKEGRMREAT-------------------------------------RMFS 290
Y L+ C G + +A R+ +
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 291 E--IKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDG 348
E I+ A P +Y+ + + +L + +V M +KG P Y + ++ LC+ G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 349 RIRDANKLLN-EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES-GLKPDPFT 406
++++A ++N EM + N LI G A+ + KM + + T
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEET 407
Query: 407 YKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFL 466
Y+ L+ G C+ + A +++ ML P +Y ++ G C D + +E +
Sbjct: 408 YQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMV 467
Query: 467 SKGLCLDASVYRALIRRL--CKIEQIECAEKLF 497
S+ + ++SV++AL + C I+ +E E L
Sbjct: 468 SQDMVPESSVWKALAESVCFCAIDVVEILEHLI 500
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 124/348 (35%), Gaps = 86/348 (24%)
Query: 285 ATRMFSEIKDATP----NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSI 340
A ++F E K+ P N Y T+ID K+N + + V E M+ + + S+
Sbjct: 28 ALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASV 87
Query: 341 LRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNK------ 394
+R + GR+ DA L + E +++ +TL+ K +L++A K
Sbjct: 88 IRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWE 147
Query: 395 ------------------------------MLESGLKPDPFTYKALIHGFCKMDELESAK 424
M G PD +Y+ L+ GFC +LE A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 425 ELLFGML----DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGL---------- 470
LL+ M G Y ++D C VD + + + L KGL
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 471 -----------------------------CLDASVYRALIRRLCKIEQIECAEKLFYHME 501
CLD+ Y A+ L + ++ E++ M
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDS--YSAMATDLFEEGKLVEGEEVLLAMR 325
Query: 502 GNGISGDSVIYTSLAYAYWKSGKTSVASNVL-EEMAKRRLIITAKIYS 548
G IY + A ++GK A +V+ +EM + + T +Y+
Sbjct: 326 SKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYN 373
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 39/327 (11%)
Query: 117 RIHDD-PEVNSQVLSWLVI--HYAKSRMTQDALQVFEQM-RLYQLKPHLPACTVLLSSL- 171
R+ D+ PE + V+ W + ++K+ + ++AL +F M R L P +L++
Sbjct: 219 RVFDEMPEPD--VICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 172 ----LKDGTTNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGV 227
LK G +IH +L+ +G+ N+ + + L+ K V A+Q+ N M +K
Sbjct: 277 NLRRLKQGK-----EIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 228 VPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATR 287
V +++ L+ YC+ G H +A+ I +ME + D+ + +++ K A R
Sbjct: 332 V----SWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVL----KACAGLAAVR 379
Query: 288 MFSEI------KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSIL 341
+ EI + N + + LID Y K+ +D A +V M + + T+N++L
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMI----TWNAML 435
Query: 342 RKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLES-GL 400
L Q+GR +A N+M +K ++ D I+ ++ A G + + M +S G+
Sbjct: 436 SALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGI 495
Query: 401 KPDPFTYKALIHGFCKMDELESAKELL 427
KP Y +I + E A+ LL
Sbjct: 496 KPGTEHYSCMIDLLGRAGLFEEAENLL 522
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 5/315 (1%)
Query: 225 KGVVPDIFT---YNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGR 281
K +VPD F +N L+ C++ +A ++ ++ + D+ ++N L+ G+ K
Sbjct: 171 KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW-KSSE 228
Query: 282 MREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSIL 341
EA + K P+ VTY +LID YCK E+++A K+ + M + P V TY +++
Sbjct: 229 EAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVI 288
Query: 342 RKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLK 401
L G+ A ++L EM E D N I + L A K ++M++ GL
Sbjct: 289 GGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS 348
Query: 402 PDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILAL 461
P+ TY ++L + EL ML P+ S +++ + + + VD + L
Sbjct: 349 PNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 408
Query: 462 PDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWK 521
++ + KG + V L+ LC + ++E AEK M G +V + +
Sbjct: 409 WEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMEL 468
Query: 522 SGKTSVASNVLEEMA 536
+ K +N++++MA
Sbjct: 469 ANKHDEVNNLIQKMA 483
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 175/416 (42%), Gaps = 33/416 (7%)
Query: 24 GNLLKVNNAPVLSSTTIH-------QVLLQLSLNGYGPSISFPFFKWVESTPHYTHSLQC 76
G+ L+V LSS+ IH +VL ++ + P + F+++ + + HS
Sbjct: 51 GSNLQVELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFS 110
Query: 77 SWAMIQILAKYKHFKTAQQML--DKIAHRDFXXXXXXXXXXXRIHDDPEVNSQVLSW--- 131
M+ IL + + F ++L K R R+ V V S+
Sbjct: 111 LDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKF 170
Query: 132 ---------------LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGT 176
L+ + + DA V+ ++ +Q +P L +LLS
Sbjct: 171 KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNILLSGWKSSEE 229
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
++ K G+ ++ YN LI K R++E+A +L+++M E+ PD+ TY T
Sbjct: 230 AEAFFEEMK---GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTT 286
Query: 237 LISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KD 294
+I G +A + +M+ G D+ +YN+ I FC R+ +A ++ E+ K
Sbjct: 287 VIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 295 ATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDAN 354
+PN TY AN+L ++ ++ M P + +++ + ++ A
Sbjct: 347 LSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAM 406
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKAL 410
+L +M K + ++ + L++ + ++ A K +M+E G +P ++K +
Sbjct: 407 RLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 178/430 (41%), Gaps = 32/430 (7%)
Query: 121 DPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVV 180
DP + S S L+ K+++ ++ VF +M + L P L + V
Sbjct: 78 DPTIYS--FSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG 135
Query: 181 WKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISL 240
+IH G+ ++ ++ + H + + A+++ + M +K D+ T + L+
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLCA 191
Query: 241 YCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPN 298
Y +KG E + I +ME GI +IVS+N ++ GF + G +EA MF +I P+
Sbjct: 192 YARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
VT ++++ + L+ + + +GL ++++ + G + L N
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 359 --EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
EM E V CN I S+ G + AL+ E ++ + ++ ++I G +
Sbjct: 312 QFEMMEAGV------CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 417 MDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL---- 472
+ A EL M AG P++ + ++ I AL + G +
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPA------CGNIAALGHGRSTHGFAVRVHL 419
Query: 473 --DASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASN 530
+ V ALI K +I ++ +F M + V + SL + GK +
Sbjct: 420 LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL----VCWNSLMNGFSMHGKAKEVMS 475
Query: 531 VLEEMAKRRL 540
+ E + + RL
Sbjct: 476 IFESLMRTRL 485
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 174/395 (44%), Gaps = 37/395 (9%)
Query: 124 VNSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVW 181
+ + ++SW ++ + +S ++A+ +F+++ P + +L S+ N+
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 182 KIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLN--EMEEKGVVPDIFTYNTLIS 239
IH +++ G++ + + + +I KS V L N EM E GV N I+
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC------NAYIT 326
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TP 297
+ G+ +AL + + + + + L++VS+ S+I G + G+ EA +F E++ A P
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 298 NHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLL 357
NHVT +++ L L V ++++ + GRI + +
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 358 NEMSEKKVQADNITC-NTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCK 416
N M K N+ C N+L+N +S G K + ++ + LKPD ++ +L+ C
Sbjct: 447 NMMPTK-----NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSA-CG 500
Query: 417 MDELESAKELLFGML--DAGFTPSYCSYSWIVD--GYCKK--DNVDAILALPDEFLSKGL 470
L F M+ + G P YS +V+ G K + D I +P E
Sbjct: 501 QVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE------ 554
Query: 471 CLDASVYRALIRRLCKIEQ----IECAEKLFYHME 501
D+ V+ AL+ C+++ E A + +H+E
Sbjct: 555 -PDSCVWGALLNS-CRLQNNVDLAEIAAEKLFHLE 587
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 139/343 (40%), Gaps = 71/343 (20%)
Query: 128 VLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRL 187
V+S ++ Y KS + +F Q + + C ++ L ++G + ++ +
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAG----VCNAYITGLSRNGLVDKALEMFELF 344
Query: 188 VQDGVVLNIYIYNCLIHACSKS-RDVERAKQLLNEMEEKGVVPDIFTYNTLI-------S 239
+ + LN+ + +I C+++ +D+E A +L EM+ GV P+ T +++ +
Sbjct: 345 KEQTMELNVVSWTSIIAGCAQNGKDIE-ALELFREMQVAGVKPNHVTIPSMLPACGNIAA 403
Query: 240 LYCKKGMHYEALSIQ------------DKMEREG-INL-----------DIVSYNSLIYG 275
L + H A+ + D + G INL ++V +NSL+ G
Sbjct: 404 LGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNG 463
Query: 276 FCKEGRMREATRMFSEIKDA--TPNHVTYTTLIDGYCKANELDQALKVRELM-EAKGLYP 332
F G+ +E +F + P+ +++T+L+ + D+ K ++M E G+ P
Sbjct: 464 FSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP 523
Query: 333 GVATYNSILRKLCQDGRIRDANKLLNEMS-----------------EKKVQADNITCNTL 375
+ Y+ ++ L + G++++A L+ EM + V I L
Sbjct: 524 RLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKL 583
Query: 376 I--------------NAYSKIGDLKSALKFKNKMLESGLKPDP 404
N Y+ G +NKM GLK +P
Sbjct: 584 FHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP 626
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 11/259 (4%)
Query: 234 YNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI- 292
+N L+ +C + EA SI +K+ N D+ + N L+ GF + G + + E+
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 293 -KDATPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIR 351
+ PN VTY IDG+CK +AL++ E M+ V +++ G R
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIH---GSGVAR 294
Query: 352 D---ANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYK 408
+ A +L +E+S++ + D N L+++ K GD+ A+K +M E G++PD T+
Sbjct: 295 NKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFH 354
Query: 409 ALIHGFCKMDE--LESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFL 466
++ G K E E M + P + ++ +C V+ L L L
Sbjct: 355 SMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYML 414
Query: 467 SKGLCLDASVYRALIRRLC 485
KG C L LC
Sbjct: 415 EKGYCPHGHALELLTTALC 433
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 165/409 (40%), Gaps = 64/409 (15%)
Query: 81 IQILAKYKHFKTAQQMLDKIAHRDFXXXXXXXXXXXRIHDDPEVNS-QVLSWLVIHYAKS 139
+ ILA+ ++F A ++ ++ D P + S + +S L+ AK
Sbjct: 110 LHILARMRYFDQAWALMAEVRK-----------------DYPNLLSFKSMSILLCKIAKF 152
Query: 140 RMTQDALQVFEQMR--LYQLKPHLPACTVLLSSLLKD----GTTNVVWKIHKRLVQDGVV 193
++ L+ F +M +++ K + +LL + + ++ K+H R D
Sbjct: 153 GSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKT 212
Query: 194 LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
+NI L+ ++ DV + +EM ++G P+ TY I +CKK EAL +
Sbjct: 213 MNI-----LLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI--KDATPNHVTYTTLIDGYCK 311
+ M+R ++ + +LI+G +A ++F EI + TP+ Y L+ K
Sbjct: 268 FEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMK 327
Query: 312 ANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNIT 371
++ A+KV + ME KG+ P T++S+ + M K+ + +
Sbjct: 328 CGDVSGAIKVMKEMEEKGIEPDSVTFHSM---------------FIGMMKSKEFGFNGVC 372
Query: 372 CNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGML 431
++ KM E L P T L+ FC E+ +L ML
Sbjct: 373 ------------------EYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYML 414
Query: 432 DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRAL 480
+ G+ P + + C + + + + +G C+ VYR L
Sbjct: 415 EKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRML 463
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 12/231 (5%)
Query: 315 LDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN-------EMSEKKVQA 367
DQA + + E + YP + ++ S+ LC+ + + L E+ KK
Sbjct: 119 FDQAWAL--MAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGV 176
Query: 368 DNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELL 427
D N L+ A+ ++K A K L S PD T L+ GF + ++ + +
Sbjct: 177 DEF--NILLRAFCTEREMKEARSIFEK-LHSRFNPDVKTMNILLLGFKEAGDVTATELFY 233
Query: 428 FGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKI 487
M+ GF P+ +Y +DG+CKK N L L ++ + + LI
Sbjct: 234 HEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVA 293
Query: 488 EQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKR 538
A +LF + G++ D Y +L + K G S A V++EM ++
Sbjct: 294 RNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEK 344
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 129/291 (44%), Gaps = 13/291 (4%)
Query: 169 SSLLKDGTTNVVWKIHKRLVQDGV--VLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKG 226
S+L K+ + KI+ + V + Y + +K R + L+ +
Sbjct: 38 STLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDP 97
Query: 227 VVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREAT 286
+ + Y+TLI Y + M A+ ++M++ G VS+N+L+ +
Sbjct: 98 KIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVP 157
Query: 287 RMFSEIKDA----TPNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILR 342
++F EI P+ ++Y LI YC + ++A+++ M+ KG+ + +IL
Sbjct: 158 QLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILS 217
Query: 343 KLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFK---NKMLESG 399
L + G + A+ L NEM +K + DN N I + K +S + K +M G
Sbjct: 218 SLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK----ESPERVKELIEEMSSMG 273
Query: 400 LKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYC 450
LKPD +Y L+ +C+ L+ AK++ G+ P+ ++ ++ C
Sbjct: 274 LKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLC 324
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDG 191
L+ Y S + A+++ QM+ ++ A T +LSSL K G V + +V+ G
Sbjct: 180 LIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKG 239
Query: 192 VVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEAL 251
L+ YN I + K ER K+L+ EM G+ PD +YN L++ YC++GM EA
Sbjct: 240 CELDNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAK 298
Query: 252 SIQDKMEREGINLDIVSYNSLIYGFC 277
+ + +E + ++ +LI+ C
Sbjct: 299 KVYEGLEGNNCAPNAATFRTLIFHLC 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 119/288 (41%), Gaps = 49/288 (17%)
Query: 120 DDPEVNSQVL-SWLVIHYAKSRMTQDALQVFEQMRLY----------------------- 155
+DP++ + S L+ Y ++ M A++ FEQM Y
Sbjct: 95 NDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFD 154
Query: 156 ---QLKPHLP-----------ACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLNIYIYNC 201
QL +P + +L+ S GT +I +++ G+ + +
Sbjct: 155 KVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTT 214
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
++ + K ++E A L NEM +KG D YN I + +K + ++M G
Sbjct: 215 ILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI-MSAQKESPERVKELIEEMSSMG 273
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFS--EIKDATPNHVTYTTLIDGYCKANELDQAL 319
+ D +SYN L+ +C+ G + EA +++ E + PN T+ TLI C + +Q
Sbjct: 274 LKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGY 333
Query: 320 KVRELMEAKGLY----PGVATYNSILRKLCQDGRIRDANKLLNEMSEK 363
+ + K +Y P T ++ L ++ + DA L+ + +K
Sbjct: 334 AIFK----KSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 205/483 (42%), Gaps = 61/483 (12%)
Query: 132 LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACT--VLLSSLLKDGTTNVVWKIHKRLVQ 189
LV Y K DA +VF++M P A ++ + + +G ++ +
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEM------PDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 175
Query: 190 DGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYE 249
+GV L + + L+ AC+K RD+ +L + + + G F N L+S+Y K
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 250 ALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYT-----T 304
A + D + +G D V +NS++ + G+ E +F E+ P +YT T
Sbjct: 236 ARRLFDGFQEKG---DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALT 292
Query: 305 LIDG--YCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
DG Y K + A ++ + LY N+++ + G++ A ++L +M+
Sbjct: 293 ACDGFSYAKLGKEIHASVLKSSTHSSELY----VCNALIAMYTRCGKMPQAERILRQMN- 347
Query: 363 KKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELES 422
AD +T N+LI Y + K AL+F + M+ +G K D + ++I ++ L +
Sbjct: 348 ---NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLA 404
Query: 423 AKELLFGMLDAGFTP------------SYC-------------------SYSWIVDGYCK 451
EL ++ G+ S C S++ ++ GY +
Sbjct: 405 GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQ 464
Query: 452 KDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEKLFYHMEGNGISGDSVI 511
D L L + K + +D + +++R ++ + +++ H+ G+ D+VI
Sbjct: 465 NDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVI 523
Query: 512 YTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIYSCFSVPDGHGENKVSQMFWDHVVE 571
L Y K A+ V E + + ++ + S S +G+ E++ ++F +VE
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS-SALNGN-ESEAVELF-RRMVE 580
Query: 572 RGL 574
GL
Sbjct: 581 TGL 583
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 131/289 (45%), Gaps = 27/289 (9%)
Query: 128 VLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHK 185
V+SW ++ A + +A+++F +M L A +LS+ N +IH
Sbjct: 552 VVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHC 611
Query: 186 RLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKG 245
L++ G L I ++ + D++ AK + + +E KG + Y ++I+ Y G
Sbjct: 612 YLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKG----LLQYTSMINAYGMHG 667
Query: 246 MHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDAT------PNH 299
A+ + DKM E ++ D +S+ +L+Y C + + R F +I + P H
Sbjct: 668 CGKAAVELFDKMRHENVSPDHISFLALLYA-CSHAGLLDEGRGFLKIMEHEYELEPWPEH 726
Query: 300 VTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNE 359
Y L+D +AN + +A + ++M+ + P + ++L C+ + K + E
Sbjct: 727 --YVCLVDMLGRANCVVEAFEFVKMMKTE---PTAEVWCALL-AACRS----HSEKEIGE 776
Query: 360 MSEKK---VQADNITCNTLI-NAYSKIGDLKSALKFKNKMLESGLKPDP 404
++ ++ ++ N L+ N +++ G K + KM SG++ P
Sbjct: 777 IAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHP 825
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 156/402 (38%), Gaps = 50/402 (12%)
Query: 125 NSQVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWK 182
N+ V++W L+ Y ++ M ++AL+ F M K + T ++++ + +
Sbjct: 348 NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Query: 183 IHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYC 242
+H +++ G N+ + N LI SK + M +K D+ ++ T+I+ Y
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK----DLISWTTVIAGYA 463
Query: 243 KKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEI-KDATPNHVT 301
+ H EAL + + ++ + +D + S++ M + I + + V
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVI 523
Query: 302 YTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMS 361
L+D Y K + A +V E ++ K
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGK--------------------------------- 550
Query: 362 EKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELE 421
D ++ ++I++ + G+ A++ +M+E+GL D ++ + L
Sbjct: 551 ------DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALN 604
Query: 422 SAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
+E+ +L GF +VD Y ++ + A+ D KGL S+ A
Sbjct: 605 KGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYG 664
Query: 482 RRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSG 523
C +E LF M +S D + + +L YA +G
Sbjct: 665 MHGCGKAAVE----LFDKMRHENVSPDHISFLALLYACSHAG 702
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 142/341 (41%), Gaps = 51/341 (14%)
Query: 125 NSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIH 184
N V S L+ Y + + DA VF+ + + + L++ + T ++
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALE----SRNDVSWNALIAGHARRSGTEKALELF 250
Query: 185 KRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKK 244
+ +++DG + + Y L ACS + +E+ K + M + G F NTL+ +Y K
Sbjct: 251 QGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 245 GMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDA--TPNHVTY 302
G ++A I D++ + D+VS+NSL+ + + G +EA F E++ PN +++
Sbjct: 311 GSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 303 TTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSE 362
+++ + LD+ ELM+ G+ P Y +++ L GR D N+ L + E
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLL---GRAGDLNRALRFIEE 423
Query: 363 KKVQADNITCNTLINA----------------------------------YSKIGDLKSA 388
++ L+NA Y+ G A
Sbjct: 424 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 483
Query: 389 LKFKNKMLESGLKPDP----FTYKALIHGFCKMDELESAKE 425
+ + KM ESG+K +P + IH F DE +E
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQRE 524
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 150/348 (43%), Gaps = 17/348 (4%)
Query: 136 YAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTTNVVWKIHKRLVQDGVVLN 195
YAK ++A +VFE+M + T L+S + ++++ G N
Sbjct: 105 YAKCGSLEEARKVFEKMP----QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPN 160
Query: 196 IYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQD 255
+ + +I A + R QL + G ++ + L+ LY + G+ +A + D
Sbjct: 161 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD 220
Query: 256 KMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDA-TPNHVTYTTLIDGYCKAN 313
+E + VS+N+LI G + +A +F ++D P+H +Y +L
Sbjct: 221 ALESR----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTG 276
Query: 314 ELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCN 373
L+Q V M G N++L + G I DA K+ + ++++ V ++ N
Sbjct: 277 FLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV----VSWN 332
Query: 374 TLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDA 433
+L+ AY++ G K A+ + +M G++P+ ++ +++ L+ M
Sbjct: 333 SLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD 392
Query: 434 GFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALI 481
G P Y +VD + +++ L +E + A++++AL+
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM---PIEPTAAIWKALL 437
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 145/352 (41%), Gaps = 14/352 (3%)
Query: 198 IYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKM 257
YN L+ C+ + + + + + + + DI NTL+++Y K G EA + +KM
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 258 EREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIK--DATPNHVTYTTLIDGYCKANEL 315
+ D V++ +LI G+ + R +A F+++ +PN T +++I
Sbjct: 122 PQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 316 DQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTL 375
++ G V +++L + G + DA + + + + ++++ N L
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR----NDVSWNAL 233
Query: 376 INAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGF 435
I +++ + AL+ ML G +P F+Y +L LE K + M+ +G
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 436 TPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCKIEQIECAEK 495
+ + ++D Y K ++ + D + D + +L+ + + A
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVW 349
Query: 496 LFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKIY 547
F M GI + + + S+ A SG + E M K ++ A Y
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHY 401
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 38/268 (14%)
Query: 338 NSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLE 397
N++L + G + +A K+ EK Q D +T TLI+ YS+ AL F N+ML
Sbjct: 99 NTLLNMYAKCGSLEEARKVF----EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 398 SGLKPDPFTYKALI---------------HGFCKMDELES----AKELL-----FGML-- 431
G P+ FT ++I HGFC +S LL +G++
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 432 -----DAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYRALIRRLCK 486
DA + + S++ ++ G+ ++ + L L L G Y +L
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274
Query: 487 IEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEMAKRRLIITAKI 546
+E + + +M +G + +L Y KSG A + + +AKR ++ +
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334
Query: 547 YSCFSVPDGHGENKVSQMFWDHVVERGL 574
+ ++ HG K + +++ + G+
Sbjct: 335 LTAYA---QHGFGKEAVWWFEEMRRVGI 359
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 121/255 (47%), Gaps = 19/255 (7%)
Query: 202 LIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSIQDKMEREG 261
++ ACSK +D + K++ + E P + N L++ Y G A+ I M+
Sbjct: 242 VLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR- 300
Query: 262 INLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLIDGYCKANELDQALKV 321
D++S+ S++ G+ + G ++ A F ++ + +++T +IDGY +A +++L++
Sbjct: 301 ---DVISWTSIVKGYVERGNLKLARTYFDQM--PVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 322 RELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNITCNTLINAYSK 381
M++ G+ P T S+L G + + + + K++ D + N LI+ Y K
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFK 415
Query: 382 IGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGMLDAGFTP---- 437
G + A K + M + D FT+ A++ G + + A ++ F M D P
Sbjct: 416 CGCSEKAQKVFHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 438 -----SYCSYSWIVD 447
S C++S +VD
Sbjct: 472 YLGVLSACNHSGMVD 486
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 106/240 (44%), Gaps = 12/240 (5%)
Query: 188 VQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMH 247
V+D + I I L C + ++ EM+ G++PD FT ++++ G
Sbjct: 330 VRDRISWTIMIDGYLRAGC-----FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 248 YEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVTYTTLID 307
I+ +++ I D+V N+LI + K G +A ++F ++ + T+T ++
Sbjct: 385 EIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR--DKFTWTAMVV 442
Query: 308 GYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEM-SEKKVQ 366
G + +A+KV M+ + P TY +L G + A K +M S+ +++
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE 502
Query: 367 ADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKEL 426
+ +++ + G +K A + KM + P+ + AL+ G ++ E EL
Sbjct: 503 PSLVHYGCMVDMLGRAGLVKEAYEILRKM---PMNPNSIVWGALL-GASRLHNDEPMAEL 558
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 144/363 (39%), Gaps = 75/363 (20%)
Query: 194 LNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLISLYCKKGMHYEALSI 253
LN + N ++ AC +++ A ++ +EM E G
Sbjct: 75 LNTIVMNSVLEACVHCGNIDLALRMFHEMAEPG--------------------------- 107
Query: 254 QDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATPNHVT--YTTLIDGYCK 311
GI +D +SY +++ G K R+ EA +M I+ T ++LI G
Sbjct: 108 -------GIGVDSISYATILKGLGKARRIDEAFQMLETIEYGTAAGTPKLSSSLIYGL-- 158
Query: 312 ANELDQALKVRELMEAKGLY------------PGVATYNSILRKLCQDGRIRDANKLLNE 359
LD + +L A GL P V YN +++ + A LL+E
Sbjct: 159 ---LDALINAGDLRRANGLLARYDILLLDHGTPSVLIYNLLMKGYVNSESPQAAINLLDE 215
Query: 360 MSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESG-------LKPDPFTYKALIH 412
M +++ D +T NTLI+A K GDL +A+KF N M E L+PD TY L+
Sbjct: 216 MLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYTTLVK 275
Query: 413 GFCKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCL 472
GF +L S +E+ M C +I D VDA+L S LC
Sbjct: 276 GFGDATDLLSLQEIFLEM-------KLCENVFI-DRTAFTAVVDAMLKCGST--SGALC- 324
Query: 473 DASVYRALIRRLCKIEQIECAEKLFYH-MEGNGISGDSVIYTSLAYAYWKSGKTSVASNV 531
V+ +++R E + L+ M + GD + +L W S++ V
Sbjct: 325 ---VFGEILKRSGANEVLRPKPHLYLSMMRAFAVQGDYGMVRNLYLRLWPDSSGSISKAV 381
Query: 532 LEE 534
+E
Sbjct: 382 QQE 384
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 22/247 (8%)
Query: 124 VNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLK--PHLPACTV--LLSSLLKDG---T 176
V+S + ++ K+R +A Q+ E + P L + + LL +L+ G
Sbjct: 111 VDSISYATILKGLGKARRIDEAFQMLETIEYGTAAGTPKLSSSLIYGLLDALINAGDLRR 170
Query: 177 TNVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNT 236
N + + L+ D ++ IYN L+ S + A LL+EM + PD TYNT
Sbjct: 171 ANGLLARYDILLLDHGTPSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNT 230
Query: 237 LISLYCKKGMHYEALSIQDKMEREG-------INLDIVSYNSLIYGFCKEGRMREATRMF 289
LI K G A+ + M+ + + D+V+Y +L+ GF + +F
Sbjct: 231 LIHACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQEIF 290
Query: 290 SEIK---DATPNHVTYTTLIDGYCKANELDQALKV-RELMEAKG----LYPGVATYNSIL 341
E+K + + +T ++D K AL V E+++ G L P Y S++
Sbjct: 291 LEMKLCENVFIDRTAFTAVVDAMLKCGSTSGALCVFGEILKRSGANEVLRPKPHLYLSMM 350
Query: 342 RKLCQDG 348
R G
Sbjct: 351 RAFAVQG 357
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 188/417 (45%), Gaps = 25/417 (5%)
Query: 127 QVLSW--LVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSS-----LLKDGTTNV 179
+SW ++ Y + ++ AL+ F +M ++P+L +LSS L+++G +
Sbjct: 267 NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 180 VWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTLIS 239
+ + + L + L++ + L C K D E +++++ +I +N+LIS
Sbjct: 327 GFAVRRELDPNYESLSLALVE-LYAECGKLSDCETVLRVVSDR-------NIVAWNSLIS 378
Query: 240 LYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDATPN 298
LY +GM +AL + +M + I D + S I G + ++ I+ +
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSD 438
Query: 299 HVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLN 358
+LID Y K+ +D A V ++ + V T+NS+L Q+G +A L +
Sbjct: 439 EFVQNSLIDMYSKSGSVDSASTVFNQIKHRS----VVTWNSMLCGFSQNGNSVEAISLFD 494
Query: 359 EMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMD 418
M ++ + +T +I A S IG L+ +K++ SGLK D FT ALI + K
Sbjct: 495 YMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCG 553
Query: 419 ELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDAILALPDEFLSKGLCLDASVYR 478
+L +A+ + M + S S+S +++ Y + + ++ ++ + G + V+
Sbjct: 554 DLNAAETVFRAMS----SRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFM 609
Query: 479 ALIRRLCKIEQIECAEKLFYHMEGNGISGDSVIYTSLAYAYWKSGKTSVASNVLEEM 535
++ +E + F M+ G+S +S + +SG A ++EM
Sbjct: 610 NVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEM 666
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 155/343 (45%), Gaps = 20/343 (5%)
Query: 118 IHDDPEVNSQVLSWLVIHYAKSRMTQDALQVFEQMRLYQLKPHLPACTVLLSSLLKDGTT 177
+ DD + + +L Y ++ DA +VF+ M + L A + L+SS L++G
Sbjct: 132 VDDDAVIETSLLCM----YGQTGNLSDAEKVFDGMPVRDL----VAWSTLVSSCLENGEV 183
Query: 178 NVVWKIHKRLVQDGVVLNIYIYNCLIHACSKSRDVERAKQLLNEMEEKGVVPDIFTYNTL 237
++ K +V DGV + ++ C++ + A+ + ++ K D N+L
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 238 ISLYCKKGMHYEALSIQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSE-IKDAT 296
+++Y K G + I +K+ ++ + VS+ ++I + + +A R FSE IK
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKK----NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 297 -PNHVTYTTLIDGYCKANELDQALKVRELMEAKGLYPGVATYNSILRKLCQD-GRIRDAN 354
PN VT +++ + + V + L P + + L +L + G++ D
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCE 359
Query: 355 KLLNEMSEKKVQADNITCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGF 414
+L +S++ + + N+LI+ Y+ G + AL +M+ +KPD FT + I
Sbjct: 360 TVLRVVSDRNI----VAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISAC 415
Query: 415 CKMDELESAKELLFGMLDAGFTPSYCSYSWIVDGYCKKDNVDA 457
+ K++ ++ + + S ++D Y K +VD+
Sbjct: 416 ENAGLVPLGKQIHGHVIRTDVSDEFVQNS-LIDMYSKSGSVDS 457
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 92/188 (48%), Gaps = 10/188 (5%)
Query: 253 IQDKMEREGINLDIVSYNSLIYGFCKEGRMREATRMFSEIKDATP--NHVTYTTLIDGYC 310
+ ++ + G++ D V SL+ + + G + +A ++F D P + V ++TL+
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVF----DGMPVRDLVAWSTLVSSCL 178
Query: 311 KANELDQALKVRELMEAKGLYPGVATYNSILRKLCQDGRIRDANKLLNEMSEKKVQADNI 370
+ E+ +AL++ + M G+ P T S++ + G +R A + +++ K D
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 371 TCNTLINAYSKIGDLKSALKFKNKMLESGLKPDPFTYKALIHGFCKMDELESAKELLFGM 430
CN+L+ YSK GDL S+ ++ E K + ++ A+I + + + E A M
Sbjct: 239 LCNSLLTMYSKCGDLLSS----ERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 431 LDAGFTPS 438
+ +G P+
Sbjct: 295 IKSGIEPN 302