Miyakogusa Predicted Gene
- Lj0g3v0324229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0324229.1 Non Chatacterized Hit- tr|I1L6H0|I1L6H0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,30.32,3e-19,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopep,CUFF.22021.1
(194 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 1e-36
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 147 5e-36
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 146 7e-36
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 9e-36
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 2e-35
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 3e-35
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 4e-35
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 143 8e-35
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 1e-34
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 3e-34
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 5e-34
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 1e-33
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 1e-33
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 138 2e-33
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-33
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 6e-33
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 6e-33
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 8e-33
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 8e-33
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 2e-32
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 2e-32
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 5e-32
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 5e-32
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 133 6e-32
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-31
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 1e-31
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 4e-31
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 1e-30
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 2e-29
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 2e-29
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 124 4e-29
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 4e-29
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 5e-29
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 5e-29
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 5e-29
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 5e-29
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 7e-29
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 9e-29
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 2e-28
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 2e-28
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-28
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 4e-28
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-28
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 7e-28
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-27
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 7e-27
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 116 9e-27
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 4e-26
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 5e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-25
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 3e-25
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 110 4e-25
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-25
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 6e-25
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 7e-25
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 7e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 7e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 7e-25
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 9e-25
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 109 1e-24
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-24
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 3e-24
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-24
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 107 3e-24
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-24
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 6e-24
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 8e-24
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 1e-23
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 105 1e-23
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 105 2e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 2e-23
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 2e-23
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 4e-23
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 4e-23
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 6e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 7e-23
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 7e-23
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 7e-23
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 8e-23
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 9e-23
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-22
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 3e-22
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 9e-22
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 100 1e-21
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 3e-21
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 7e-21
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 97 8e-21
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 97 1e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 2e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 3e-20
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 5e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 7e-20
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 7e-20
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 8e-20
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 9e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 9e-20
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 1e-19
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 1e-19
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 3e-19
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 4e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 6e-19
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 6e-19
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 6e-19
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 91 7e-19
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 8e-19
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 8e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 9e-19
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-18
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 2e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 2e-18
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-18
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 4e-18
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-18
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-17
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-17
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 86 2e-17
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 2e-17
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 85 2e-17
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 5e-17
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-17
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 84 5e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 84 6e-17
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 9e-17
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-16
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-16
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 82 3e-16
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 82 3e-16
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 82 3e-16
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 4e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 4e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 5e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 8e-16
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 79 1e-15
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-15
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 7e-15
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 7e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 9e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 76 1e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-14
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-14
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 3e-14
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 4e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-14
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 8e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 8e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 9e-14
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-13
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 4e-13
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 71 5e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 5e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 9e-13
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 70 1e-12
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-12
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-11
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-11
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 65 2e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 3e-11
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 6e-11
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 62 2e-10
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 3e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 62 3e-10
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 4e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 5e-10
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-10
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 9e-10
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 60 1e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 1e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 60 1e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 59 2e-09
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-09
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 2e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 4e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 4e-09
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 4e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 4e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 58 5e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 57 6e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 7e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 7e-09
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 57 8e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 9e-09
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 57 9e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 57 1e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 2e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-08
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 55 3e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 55 3e-08
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 4e-08
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 55 4e-08
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 54 5e-08
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 7e-08
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 54 8e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 9e-08
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 53 1e-07
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 53 1e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 52 2e-07
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 52 3e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-07
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 51 5e-07
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 5e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 6e-07
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 6e-07
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 50 7e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-07
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 50 1e-06
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 49 3e-06
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 3e-06
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 48 3e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 3e-06
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 4e-06
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 4e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 4e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 4e-06
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 48 5e-06
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 48 5e-06
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 6e-06
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 7e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 7e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 47 7e-06
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 47 8e-06
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 8e-06
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 149 bits (375), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 119/198 (60%), Gaps = 9/198 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
GQT +++LLRK+E + + + V YS II CKD + +AF+L++EM K ++ T+
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N+LI GFC G + LL +MI + I PN TF++L+D KEGK +L MM+
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ PN +TYNSL+DG+C + +A +++ M G PD+ + ++ING CK +D+
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 176 ALTL---LSLQKWTAKTL 190
L L +SL+ A T+
Sbjct: 422 GLELFREMSLRGVIANTV 439
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 106/185 (57%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ R + QLL+++ + + PN + Y+++I FCK+ + +A + M++K P++ TF
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N LI G+C + + + L EM ++ + N T+N L+ G C+ G K+ M+
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ V+P++V+Y L+DG C GE+ KA +I + +S + D+ Y +II+G+C VD+
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 176 ALTLL 180
A L
Sbjct: 527 AWDLF 531
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN V Y ++ CK + A +L +M + I + ++ +I G C G L A +L
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
+EM +K + T+N L+ G C G K+L M+K+ + PNVVT++ L+D +
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
G++ +A +L M Q G+ P+ Y +I+G CK ++EA+ ++ L
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L L +++E K + ++ S +I FC+ + +S AF +++ P+ FN+L+ G
Sbjct: 108 LALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNG 167
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
C+ + EA+ L+D M+ P T N L++GLC GKV + M++ G +PN
Sbjct: 168 LCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
VTY +++ C G+ A ++L M + + D Y++II+GLCK +D A L +
Sbjct: 228 EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 287
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ V+++T++ C + VS+A +L M+ P + T N+L+ G C+ G + +A+ L
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
+D M+ PN T+ +L+ +CK G+ +L M ++ +K + V Y+ ++DG C
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G ++ A ++ N M G D+ Y +I G C D+ LL
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++ L R + +P V+ ++ + + K K L +M +K I +++T + +I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKP 120
FC L A S + +++ +P+ FN LL+GLC E +V M++ G KP
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
++T N+L++G CL G+V+ A +++ M ++G P+ Y ++N +CK A+ LL
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 14/160 (8%)
Query: 35 KDKLVS--------DAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIM 86
+DKL S DA DL+ +M+ R LP V FN L + ++L +M
Sbjct: 57 RDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116
Query: 87 KNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
K I + YT +I+++ C+ K+ + +MK G +P+ V +N+L++G CL V++
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
A ++++ M + G P + ++NGLC V +A+ L+
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 100/222 (45%), Gaps = 41/222 (18%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L+L R++ + V+ N V Y+T++ FC+ + A L+ EM+++R+ P++ ++ L+ G
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 68 FCIVGLLKEAISLLDE-----------------------------------MIMKNIDPN 92
C G L++A+ + + + +K + +
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 93 AYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILN 146
A +NI++ LC++ + M ++G P+ +TYN L+ + + A +++
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIE 602
Query: 147 SMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTAK 188
M SG DV ++IN L ++ L +LS + + K
Sbjct: 603 EMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRASLK 644
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 147 bits (370), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 112/185 (60%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G T +L LLRK+E + V +V YSTII S C+D + A L+ EM K I +V T+
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
NSL+ G C G + LL +M+ + I PN TFN+LLD KEGK+ M+
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ PN++TYN+LMDGYC+ +++A ++L+ M ++ +PD+ +T +I G C +K VD+
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 176 ALTLL 180
+ +
Sbjct: 387 GMKVF 391
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 105/185 (56%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + +L +++ + + PN++ Y+T++ +C +S+A ++ M+ + P++ TF
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
SLI G+C+V + + + + + + + NA T++IL+ G C+ GK+ M+
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
GV P+V+TY L+DG C G++ KA +I + +S + + YT II G+CK V++
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 176 ALTLL 180
A L
Sbjct: 492 AWNLF 496
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V ++++I +C K V D ++ + + ++ N T++ L+ GFC G +K A L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM+ + P+ T+ ILLDGLC GK + + K + +V Y ++++G C
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G+V A ++ S+ GV P+V YTV+I+GLCK + EA LL
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P++V +S + + K + D ++ I N++T N +I FC A S
Sbjct: 85 LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYC 133
+L +++ +P+ TFN L+ GL EGKV M++ G +P+VVTYNS+++G C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G+ + A D+L M + V DV Y+ II+ LC+ +D A++L
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 7/179 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L +++E + N+ + +I FC+ A+ + +++ P+ TFN+LI G
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKG 167
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPN 121
+ G + EA+ L+D M+ P+ T+N +++G+C+ G +L M ++ VK +
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI-KMVDEALTL 179
V TY++++D C G ++ A + M G+ V Y ++ GLCK K D AL L
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 41 DAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL 100
DA L+ EM+ R LP++ F+ + ++ + I N YT NI++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 101 DGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVT 154
+ C+ K VL +MK G +P+ T+N+L+ G L G+V++A +++ M ++G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 155 PDVQCYTVIINGLCKIKMVDEALTLL 180
PDV Y I+NG+C+ AL LL
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLL 216
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 41/201 (20%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+++ R I + ++ N V YS ++ FC+ + A +L+ EM++ +LP+V T+ L+ G
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 68 FCIVGLLKEAISLLDEM---------IM--------------------------KNIDPN 92
C G L++A+ + +++ +M K + PN
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 93 AYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILN 146
T+ +++ GLCK+G +L M + G PN TYN+L+ + G++ + ++
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 147 SMAQSGVTPDVQCYTVIINGL 167
M G + D ++I+ L
Sbjct: 568 EMKSCGFSADASSIKMVIDML 588
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L++ ++ + +VMY+TII CK V DA++L+ + K + PNV T+
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA 111
+I G C G L EA LL +M PN T+N L+ ++G + A
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 146 bits (369), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 111/186 (59%), Gaps = 10/186 (5%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
MG T+++L LL K+E + P+VV+YS II CKD SDA L+SEML K I PNVFT
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
+N +I GFC G +A LL +MI + I+P+ TFN L+ KEGK+ M+
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ + P+ VTYNS++ G+C + AK + + MA +PDV + II+ C+ K VD
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVD 449
Query: 175 EALTLL 180
E + LL
Sbjct: 450 EGMQLL 455
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 6/180 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+QLLR+I + ++ N Y+T+I FC+ ++ A DL+ EM++ + P+ T N L+YG
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
FC L+EA+ L + + M ID + +NI++ G+CK KV + GV+P+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
V TYN ++ G+C ++ A + + M +G PD Y +I G K +D+++ L+S
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 114/215 (53%), Gaps = 25/215 (11%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
M + ++ L RK+E + + N+ ++ +I FC +S + + ++ P+V T
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVT 178
Query: 61 FNSLIYGFCI----------------VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
FN+L++G C+ G L EA++L D+M+ + P TFN L++GLC
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 105 KEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ 158
EG+VL M+ +G+ +VVTY ++++G C +G+ A ++L+ M ++ + PDV
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 159 CYTVIINGLCKIKMVDEALTLLS--LQKWTAKTLF 191
Y+ II+ LCK +A L S L+K A +F
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 6/173 (3%)
Query: 18 LVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEA 77
+ P+VV ++TII +C+ K V + L E+ + ++ N T+N+LI+GFC V L A
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 78 ISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDG 131
L EMI + P+ T NILL G C+ K + V+ + + V YN ++ G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
C +V++A D+ S+ GV PDVQ Y V+I+G C + +A L K
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + L+ K+ GK + +VV Y TI+ CK A +L S+M I P+V +
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+++I C G +A L EM+ K I PN +T+N ++DG C G ++L M++
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P+V+T+N+L+ G++ +A+ + + M + PD Y +I G CK D+
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 176 ALTLLSL 182
A + L
Sbjct: 420 AKHMFDL 426
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P V+ ++T+I C + V +A L ++M+ K + +V T+ +++ G C +G K A++L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
L +M +I P+ ++ ++D LCK+G + + M+++G+ PNV TYN ++DG+C
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
G + A+ +L M + + PDV + +I+ K + EA L
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 21/179 (11%)
Query: 29 IIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKN 88
+IG F + A LY +M +RI N+++FN LI FC L ++S ++
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 89 IDPNAYTFNILLDGLCKEGKV---LAV------------------MMKQGVKPNVVTYNS 127
P+ TFN LL GLC E ++ LA+ M++ G+ P V+T+N+
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 128 LMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWT 186
L++G CL G V +A ++N M G+ DV Y I+NG+CK+ AL LLS + T
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 10/185 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L ++ + + P+ V Y+++I FCK DA ++ M + P+V TF
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTF 435
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N++I +C + E + LL E+ + + N T+N L+ G C+ + A M+
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
GV P+ +T N L+ G+C ++ +A ++ + S + D Y +II+G+CK VDE
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 176 ALTLL 180
A L
Sbjct: 556 AWDLF 560
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 21/166 (12%)
Query: 37 KLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTF 96
K + DA D + M+ R N +I F + AISL +M ++ I N Y+F
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 97 NILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQ 150
NIL+ C K+ + K G +P+VVT+N+L+ G CL +++A + M +
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 151 S---------------GVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ G+TP V + +INGLC V EA L++
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L+L I+ + + V Y+ II CK V +A+DL+ + + P+V T+N +I
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV 109
GFC + +A L +M +P+ T+N L+ G K G++
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P+V Y+ +I FC +SDA L+ +M P+ T+N+LI G G + ++I
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 79 SLLDEMIMKNIDPNAYTFNILLD 101
L+ EM +A+T ++ D
Sbjct: 628 ELISEMRSNGFSGDAFTIKMVAD 650
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 146 bits (368), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 112/186 (60%), Gaps = 6/186 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
MG T ++L LL K+E + +VV+Y+ II CKD A +L++EM K I P+V T
Sbjct: 54 MGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
++ +I FC G +A LL +MI + I+P+ TF+ L++ L KEGKV M+
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
++G+ P +TYNS++DG+C +N AK +L+SMA +PDV ++ +ING CK K VD
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233
Query: 175 EALTLL 180
+ +
Sbjct: 234 NGMEIF 239
Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 112/196 (57%), Gaps = 7/196 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + QLLR + + + P+VV +S +I + K+ VS+A ++Y +ML + I P T+
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
NS+I GFC L +A +LD M K+ P+ TF+ L++G CK +V M +
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ N VTY +L+ G+C VG+++ A+D+LN M SGV P+ + ++ LC K + +
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRK 304
Query: 176 ALTLLS-LQKWTAKTL 190
A +L LQK L
Sbjct: 305 AFAILEDLQKSEGHHL 320
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 56 PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KV 109
P+V TF +L+ G C G + +A++L+D M+ + P + +++GLCK G +
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 110 LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
L+ M + +K +VV YN+++D C G A+++ M G+ PDV Y+ +I+ C+
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 170 IKMVDEALTLL 180
+A LL
Sbjct: 124 SGRWTDAEQLL 134
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
M++ G +P+VVT+ +LM+G C G V +A +++ M + G P Y IINGLCK+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 173 VDEALTLLSLQKWT 186
+ AL LLS + T
Sbjct: 57 TESALNLLSKMEET 70
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 84 MIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGE 137
M+ P+ TF L++GLC EG+VL M+++G +P Y ++++G C +G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
A ++L+ M ++ + V Y II+ LCK
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCK 88
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 112/185 (60%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L LL K+E + +VV+YST+I S CK + V DA +L++EM K I P+VFT+
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+SLI C G +A LL +M+ + I+PN TFN L+D KEGK++ M++
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + PN+VTYNSL++G+C+ +++A+ I M PDV Y +ING CK K V +
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 176 ALTLL 180
+ L
Sbjct: 399 GMELF 403
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 6/178 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
Q+ + K +P+VV Y+T+I FCK K V D +L+ +M + ++ N T+ +LI+GF
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
A + +M+ + PN T+N LLDGLCK GK V + K ++P++
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
TYN + +G C G+V D+ S++ GV PDV Y +I+G CK + +EA TL
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 96/169 (56%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V N+ Y+ +I C+ +S A + +M+ P++ T NSL+ GFC + EA+
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
+L+D+M+ P+ TF L+ GL + K ++ M+ +G +P++VTY ++++G
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C GE + A ++LN M + + DV Y+ +I+ LCK + VD+AL L +
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFT 264
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 93/165 (56%), Gaps = 6/165 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
++L R + + ++ N V Y+T+I F + +A ++ +M++ + PN+ T+N+L+ G
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
C G L++A+ + + + ++P+ YT+NI+ +G+CK GKV + +GVKP+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
V+ YN+++ G+C G +A + M + G PD Y +I
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 102/186 (54%), Gaps = 6/186 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ ++ L+ ++ K P++V Y +I CK A +L ++M +I +V ++
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQ 116
++I C + +A++L EM K I P+ +T++ L+ LC G+ +L+ M+++
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ PNVVT+NSL+D + G++ +A+ + + M Q + P++ Y +ING C +DEA
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 177 LTLLSL 182
+ +L
Sbjct: 365 QQIFTL 370
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 98/187 (52%), Gaps = 10/187 (5%)
Query: 5 RASLQLLRKIEGKLVM----PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
R+ L I GK++ P++V ++++ FC +S+A L +M+ P+ T
Sbjct: 113 RSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 172
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
F +L++G EA++L++ M++K P+ T+ +++GLCK G+ +L M
Sbjct: 173 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 232
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
K ++ +VV Y++++D C V+ A ++ M G+ PDV Y+ +I+ LC
Sbjct: 233 KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 292
Query: 175 EALTLLS 181
+A LLS
Sbjct: 293 DASRLLS 299
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 39 VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI 98
+ +A DL+ EM+ R P++ F+ L+ + IS ++M + + N YT+NI
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 99 LLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
+++ LC+ + +L MMK G P++VT NSL++G+C +++A +++ M + G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLLS 181
PD +T +++GL + EA+ L+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V +S ++ + K K +M + N++T+N +I C L A+++
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCL 134
L +M+ P+ T N LL+G C ++ M++ G +P+ VT+ +L+ G
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ ++A ++ M G PD+ Y +INGLCK D AL LL+
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++ + ++ + P++ Y+ + CK V D +DL+ + K + P+V +
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA 111
N++I GFC GL +EA +L +M P++ T+N L+ ++G A
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 144 bits (363), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 9/198 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
GQT +++LLRK+E + + + V YS II CK + +AF+L++EM K I N+ T+
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N LI GFC G + LL +MI + I+PN TF++L+D KEGK+ M+
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ P+ +TY SL+DG+C ++KA +++ M G P+++ + ++ING CK +D+
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 176 ALTL---LSLQKWTAKTL 190
L L +SL+ A T+
Sbjct: 422 GLELFRKMSLRGVVADTV 439
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 102/185 (55%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ R + +L +++ + + P+ + Y+++I FCK+ + A + M++K PN+ TF
Sbjct: 347 GKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTF 406
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N LI G+C + + + L +M ++ + + T+N L+ G C+ GK + M+
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ V PN+VTY L+DG C GE KA +I + +S + D+ Y +II+G+C VD+
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 176 ALTLL 180
A L
Sbjct: 527 AWDLF 531
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 90/162 (55%), Gaps = 6/162 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN+ ++ +I +CK + D +L+ +M + ++ + T+N+LI GFC +G L A L
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM+ + + PN T+ ILLDGLC G ++ + K ++ ++ YN ++ G C
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+V+ A D+ S+ GV P V+ Y ++I GLCK + EA
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 6/187 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++ L+ K+ PN V Y ++ CK + A +L +M + I + +
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+ +I G C G L A +L +EM MK I N T+NIL+ G C G K+L M+K
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + PNVVT++ L+D + G++ +A+++ M G+ PD YT +I+G CK +D+
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 176 ALTLLSL 182
A ++ L
Sbjct: 387 ANQMVDL 393
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN + +ST+I C + VS+A +L M+ P++ T N+L+ G C+ G EA+ L
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
+D+M+ PNA T+ +L+ +CK G+ +L M ++ +K + V Y+ ++DG C
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G ++ A ++ N M G+T ++ Y ++I G C D+ LL
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Score = 100 bits (248), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L L +++E K + N+ S +I FC+ + + AF +++ PN TF++LI G
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 167
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
C+ G + EA+ L+D M+ P+ T N L++GLC GK ++ M++ G +PN
Sbjct: 168 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 227
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
VTY +++ C G+ A ++L M + + D Y++II+GLCK +D A L +
Sbjct: 228 AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFN 287
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++ L R + +P V+ +S + + K K L +M K I N++T + +I
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKP 120
FC L A S + ++I +PN TF+ L++GLC EG+V M++ G KP
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+++T N+L++G CL G+ +A +++ M + G P+ Y ++N +CK A+ LL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 39 VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI 98
DA DL+ +M+ R LP V F+ L ++L +M +K I N YT +I
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 99 LLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
+++ C+ K+ + ++K G +PN +T+++L++G CL G V++A ++++ M + G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLL 180
PD+ ++NGLC EA+ L+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLI 216
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + +L +++ + V PN+V Y ++ C + A +++ ++ ++ ++
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
+N +I+G C + +A L + +K + P T+NI++ GLCK+G + M
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ G P+ TYN L+ + G+ K+ ++ + + G + D ++I+ L ++
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKK 630
Query: 175 EALTLLS 181
L +LS
Sbjct: 631 SFLDMLS 637
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 144 bits (363), Expect = 4e-35, Method: Composition-based stats.
Identities = 79/186 (42%), Positives = 111/186 (59%), Gaps = 10/186 (5%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
MG T+++L LL K+E + P+VV+YS II CKD SDA L+SEML K I PNVFT
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
+N +I GFC G +A LL +MI + I+P+ TFN L+ KEGK+ M+
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ + P+ VTYNS++ G+C + AK + + MA +PDV + II+ C+ K VD
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVD 449
Query: 175 EALTLL 180
E + LL
Sbjct: 450 EGMQLL 455
Score = 113 bits (282), Expect = 8e-26, Method: Composition-based stats.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 6/180 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+QLLR+I + ++ N Y+T+I FC+ ++ A DL+ EM++ + P+ T N L+YG
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
FC L+EA+ L + + M ID + +NI++ G+CK KV + GV+P+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
V TYN ++ G+C ++ A + + M +G PD Y +I G K +D+++ L+S
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Score = 107 bits (268), Expect = 4e-24, Method: Composition-based stats.
Identities = 65/215 (30%), Positives = 114/215 (53%), Gaps = 25/215 (11%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
M + ++ L RK+E + + N+ ++ +I FC +S + + ++ P+V T
Sbjct: 119 MNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVT 178
Query: 61 FNSLIYGFCI----------------VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
FN+L++G C+ G L EA++L D+M+ + P TFN L++GLC
Sbjct: 179 FNTLLHGLCLEDRISEALALFGYMVETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLC 237
Query: 105 KEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ 158
EG+VL M+ +G+ +VVTY ++++G C +G+ A ++L+ M ++ + PDV
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
Query: 159 CYTVIINGLCKIKMVDEALTLLS--LQKWTAKTLF 191
Y+ II+ LCK +A L S L+K A +F
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Score = 105 bits (262), Expect = 2e-23, Method: Composition-based stats.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 6/173 (3%)
Query: 18 LVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEA 77
+ P+VV ++TII +C+ K V + L E+ + ++ N T+N+LI+GFC V L A
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486
Query: 78 ISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDG 131
L EMI + P+ T NILL G C+ K + V+ + + V YN ++ G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
C +V++A D+ S+ GV PDVQ Y V+I+G C + +A L K
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Score = 98.6 bits (244), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + L+ K+ GK + +VV Y TI+ CK A +L S+M I P+V +
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+++I C G +A L EM+ K I PN +T+N ++DG C G ++L M++
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P+V+T+N+L+ G++ +A+ + + M + PD Y +I G CK D+
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 176 ALTLLSL 182
A + L
Sbjct: 420 AKHMFDL 426
Score = 97.1 bits (240), Expect = 7e-21, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 95/167 (56%), Gaps = 6/167 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P V+ ++T+I C + V +A L ++M+ K + +V T+ +++ G C +G K A+
Sbjct: 222 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
+LL +M +I P+ ++ ++D LCK+G + + M+++G+ PNV TYN ++DG+
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
C G + A+ +L M + + PDV + +I+ K + EA L
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Score = 95.5 bits (236), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 89/174 (51%), Gaps = 21/174 (12%)
Query: 29 IIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKN 88
+IG F + A LY +M +RI N+++FN LI FC L ++S ++
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 89 IDPNAYTFNILLDGLCKEGKV---LAV------------------MMKQGVKPNVVTYNS 127
P+ TFN LL GLC E ++ LA+ M++ G+ P V+T+N+
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 128 LMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
L++G CL G V +A ++N M G+ DV Y I+NG+CK+ AL LLS
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Score = 90.1 bits (222), Expect = 8e-19, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
+ + P+ V Y+++I FCK DA ++ M + P+V TFN++I +C + E
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDE 450
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMD 130
+ LL E+ + + N T+N L+ G C+ + A M+ GV P+ +T N L+
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G+C ++ +A ++ + S + D Y +II+G+CK VDEA L
Sbjct: 511 GFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 54/103 (52%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L+L I+ + + V Y+ II CK V +A+DL+ + + P+V T+N +I
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV 109
GFC + +A L +M +P+ T+N L+ G K G++
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 143 bits (360), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 112/185 (60%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G T +L LL K+E + NVV+YST+I S CK + DA +L++EM K + PNV T+
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+SLI C G +A LL +MI + I+PN TF+ L+D K+GK++ M+K
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + PN+ TY+SL++G+C++ + +AK +L M + P+V Y +ING CK K VD+
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 176 ALTLL 180
+ L
Sbjct: 412 GMELF 416
Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 107/176 (60%), Gaps = 6/176 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L L ++E K V PNV+ YS++I C SDA L S+M+ ++I PN+ TF++LI
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAVMMKQGVKP 120
F G L +A L +EMI ++IDPN +T++ L++G C + ++L +M+++ P
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
NVVTYN+L++G+C V+K ++ M+Q G+ + YT +I+G + + D A
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 447
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 6/174 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L ++ + + PN+ YS++I FC + +A + M+ K LPNV T+
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL-----CKEGK-VLAVMMK 115
N+LI GFC + + + L EM + + N T+ L+ G C + V M+
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
GV PN++TYN L+DG C G++ KA + + +S + PD+ Y ++I G+CK
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 81/143 (56%), Gaps = 9/143 (6%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + L+L+ + K +PNVV Y+T+I FCK K V +L+ EM + ++ N T
Sbjct: 374 LGEAKQMLELMIR---KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT 430
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
+ +LI+GF A + +M+ + PN T+NILLDGLCK GK V +
Sbjct: 431 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 490
Query: 115 KQGVKPNVVTYNSLMDGYCLVGE 137
+ ++P++ TYN +++G C G+
Sbjct: 491 RSTMEPDIYTYNIMIEGMCKAGK 513
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 96/169 (56%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ N+ Y+ +I FC+ +S A L +M+ P++ T NSL+ GFC + +A+
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
+L+D+M+ P+ TF L+ GL K ++ M+++G +P++VTY ++++G
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C G+ + A ++LN M + + +V Y+ +I+ LCK + D+AL L +
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 277
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 87/167 (52%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V ++++ FC +SDA L +M+ P+ TF +LI+G + EA++L
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
+D M+ + P+ T+ +++GLCK G +L M ++ NVV Y++++D C
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ A ++ M GV P+V Y+ +I+ LC +A LLS
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 101/186 (54%), Gaps = 6/186 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ ++ L+ ++ + P++V Y ++ CK A +L ++M A +I NV ++
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQ 116
++I C +A++L EM K + PN T++ L+ LC G+ +L+ M+++
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ PN+VT+++L+D + G++ KA+ + M + + P++ Y+ +ING C + + EA
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 177 LTLLSL 182
+L L
Sbjct: 378 KQMLEL 383
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 6/161 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y ++ + D + DA L+ M R P++ F+ L+ + IS ++M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 86 MKNIDPNAYTFNILLDGLCK------EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ I N YT+NIL++ C+ +L MMK G +P++VT NSL++G+C ++
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
A +++ M + G PD +T +I+GL EA+ L+
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 107/185 (57%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G T +L LL K+E + +VV+++TII S CK + V DA +L+ EM K I PNV T+
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+SLI C G +A LL +MI K I+PN TFN L+D KEGK + M+K
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P++ TYNSL++G+C+ ++KAK + M PDV Y +I G CK K V++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 176 ALTLL 180
L
Sbjct: 419 GTELF 423
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 98/182 (53%), Gaps = 6/182 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
Q+ + K P+VV Y+T+I FCK K V D +L+ EM + ++ + T+ +LI G
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
G A + +M+ + P+ T++ILLDGLC GK V M K +K ++
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
Y ++++G C G+V+ D+ S++ GV P+V Y +I+GLC +++ EA LL
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 183 QK 184
K
Sbjct: 566 MK 567
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++ Y++++ FC + A ++ M++K P+V T+N+LI GFC +++ L
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM + + + T+ L+ GL +G KV M+ GV P+++TY+ L+DG C
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G++ KA ++ + M +S + D+ YT +I G+CK VD+ L
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q +L LL K+ P++V S+++ +C K +SDA L +M+ P+ TF
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQ 116
+LI+G + EA++L+D M+ + PN T+ ++++GLCK G +L M
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
++ +VV +N+++D C V+ A ++ M G+ P+V Y+ +I+ LC +A
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 177 LTLLS 181
LLS
Sbjct: 315 SQLLS 319
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 99/179 (55%), Gaps = 6/179 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+ L K++ ++ + Y+ +I FC+ +S A L +M+ P++ T +SL+ G
Sbjct: 105 ISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
+C + +A++L+D+M+ P+ TF L+ GL K ++ M+++G +PN
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+VTY +++G C G+ + A ++LN M + + DV + II+ LCK + VD+AL L
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y I+ + D + DA L+ M+ R LP++ FN L+ + ISL ++M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 86 MKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
I YT+NIL++ C+ ++ L MMK G +P++VT +SL++GYC ++
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
A +++ M + G PD +T +I+GL EA+ L+
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 91/168 (54%), Gaps = 6/168 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P++V ++ ++ + K K L +M I+ ++T+N LI FC + A++
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYC 133
LL +M+ +P+ T + LL+G C ++ + M++ G +P+ +T+ +L+ G
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
L + ++A +++ M Q G P++ Y V++NGLCK D AL LL+
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + ++ +++ V P+++ YS ++ C + + A +++ M I +++ +
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVLAVMMKQ 116
++I G C G + + L + +K + PN T+N ++ GLC +E L MK+
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 117 -GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G PN TYN+L+ + G+ + +++ M D ++ N L ++
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKS 628
Query: 176 ALTLLS 181
L +LS
Sbjct: 629 FLDMLS 634
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L LL K+E + NVV+++TII S CK + V A DL++EM K I PNV T+
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
NSLI C G +A LL M+ K I+PN TFN L+D KEGK++ M++
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P+ +TYN L++G+C+ +++AK + M P++Q Y +ING CK K V++
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 176 ALTLL 180
+ L
Sbjct: 417 GVELF 421
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V S+++ +C K +SDA L +M+ P+ FTF +LI+G + EA++L
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
+D+M+ + P+ T+ +++GLCK G + L M +K NVV +N+++D C
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
V A D+ M G+ P+V Y +IN LC +A LLS
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 98/182 (53%), Gaps = 9/182 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
Q+ + + K +PN+ Y+T+I FCK K V D +L+ EM + ++ N T+ ++I GF
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
G A + +M+ + + T++ILL GLC GK + + K ++ N+
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
YN++++G C G+V +A D+ S++ + PDV Y +I+GLC +++ EA L
Sbjct: 504 FIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRK 560
Query: 183 QK 184
K
Sbjct: 561 MK 562
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ ++ YS I FC+ +S A + ++M+ P++ T +SL+ G+C + +A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLC---KEGKVLAV---MMKQGVKPNVVTYNSLMDGY 132
+L+D+M+ P+ +TF L+ GL K + +A+ M+++G +P++VTY ++++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C G+++ A ++LN M + + +V + II+ LCK + V+ A+ L +
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFT 282
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 39 VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI 98
V DA DL+ +M+ R P++ FN L+ + + ISL ++M I + YT++I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 99 LLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
++ C+ + VLA MMK G +P++VT +SL++GYC ++ A +++ M + G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLL 180
PD +T +I+GL EA+ L+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALV 211
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
++L R++ + ++ N V Y+TII F + A ++ +M++ R+ ++ T++ L++G
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV---LAVMMKQGVKPNVVT 124
C G L A+ + + ++ N + +N +++G+CK GKV + +KP+VVT
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVT 537
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
YN+++ G C + +A D+ M + G P+ Y +I
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 87/167 (52%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V ++ ++ + K L +M I +++T++ I FC L A+++
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
L +M+ +P+ T + LL+G C ++ + M++ G KP+ T+ +L+ G L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ ++A +++ M Q G PD+ Y ++NGLCK +D AL LL+
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 9/186 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G ++ + +++ V +++ YS ++ C + A ++ + + N+F +
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVLAVMMKQ 116
N++I G C G + EA L + +I P+ T+N ++ GLC +E L MK+
Sbjct: 507 NTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 117 -GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G PN TYN+L+ + + +++ M SG D +++ N L ++
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKS 623
Query: 176 ALTLLS 181
L +LS
Sbjct: 624 FLNMLS 629
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 110/185 (59%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L LL+K+E + P VV+Y+TII + C K V+DA +L++EM K I PNV T+
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
NSLI C G +A LL +MI + I+PN TF+ L+D KEGK++ M+K
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P++ TY+SL++G+C+ +++AK + M P+V Y +I G CK K VDE
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 176 ALTLL 180
+ L
Sbjct: 415 GMELF 419
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 6/174 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K PNVV Y+T+I FCK K V + +L+ EM + ++ N T+ +LI+GF
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMD 130
A + +M+ + P+ T++ILLDGLC GK V + + ++P++ TYN +++
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
G C G+V D+ S++ GV P+V YT +++G C+ + +EA L K
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V ++++ FC +SDA L +M+ P+ FTFN+LI+G EA++L
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV-----LAVMMKQG-VKPNVVTYNSLMDGYCL 134
+D M++K P+ T+ I+++GLCK G + L M+QG ++P VV YN+++D C
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
VN A ++ M G+ P+V Y +I LC +A LLS
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 95/165 (57%), Gaps = 6/165 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
++L R++ + ++ N V Y+T+I F + + +A ++ +M++ +LP++ T++ L+ G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
C G ++ A+ + + + ++P+ YT+NI+++G+CK GKV + +GVKPN
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
VVTY ++M G+C G +A + M + G PD Y +I
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 96/169 (56%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ N+ YS +I FC+ +S A + ++M+ P++ T NSL+ GFC + +A+
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
SL+ +M+ P+++TFN L+ GL + + ++ M+ +G +P++VTY +++G
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C G+++ A +L M Q + P V Y II+ LC K V++AL L +
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++ YS++I FC + +A ++ M++K PNV T+N+LI GFC + E + L
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 81 LDEMIMKNIDPNAYTFNILLDGL-----CKEGK-VLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM + + N T+ L+ G C + V M+ GV P+++TY+ L+DG C
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G+V A + + +S + PD+ Y ++I G+CK V++ L
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 101/188 (53%), Gaps = 8/188 (4%)
Query: 3 QTRAS--LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
RAS + L+ ++ K P++V Y ++ CK + A L +M +I P V
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
+N++I C + +A++L EM K I PN T+N L+ LC G+ +L+ M+
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
++ + PNVVT+++L+D + G++ +A+ + + M + + PD+ Y+ +ING C +D
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 175 EALTLLSL 182
EA + L
Sbjct: 379 EAKHMFEL 386
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 36 DKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYT 95
D + DA +L+ +M+ R P++ F+ L+ + ISL ++M I N YT
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 96 FNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMA 149
++IL++ C+ + VLA MMK G +P++VT NSL++G+C ++ A ++ M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 150 QSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ G PD + +I+GL + EA+ L+
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V +S ++ + K L +M I N++T++ LI FC L A+++
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
L +M+ +P+ T N LL+G C ++ + M++ G +P+ T+N+L+ G
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
++A +++ M G PD+ Y +++NGLCK +D AL+LL
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L + ++ + P++ Y+ +I CK V D +DL+ + K + PNV T+
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA 111
+++ GFC GL +EA +L EM + P++ T+N L+ ++G A
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA 589
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 105/185 (56%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + LL K+E + +VV+++TII S CK + V DA +L+ EM K I PNV T+
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+SLI C G +A LL +MI K I+PN TFN L+D KEGK + M+K
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P++ TYNSL++G+C+ ++KAK + M PD+ Y +I G CK K V++
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 176 ALTLL 180
L
Sbjct: 344 GTELF 348
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 6/182 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
Q+ + K P++ Y+T+I FCK K V D +L+ EM + ++ + T+ +LI G
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
G A + +M+ + P+ T++ILLDGLC GK V M K +K ++
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
Y ++++G C G+V+ D+ S++ GV P+V Y +I+GLC +++ EA LL
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 183 QK 184
K
Sbjct: 491 MK 492
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++ Y+++I FC + A ++ M++K P++ T+N+LI GFC +++ L
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM + + + T+ L+ GL +G KV M+ GV P+++TY+ L+DG C
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G++ KA ++ + M +S + D+ YT +I G+CK VD+ L
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q +L LL K+ P++V S+++ +C K +SDA L +M+ P+ TF
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ 116
+LI+G + EA++L+D M+ + PN T+ ++++GLCK G + L M
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
++ +VV +N+++D C V+ A ++ M G+ P+V Y+ +I+ LC +A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 177 LTLLS 181
LLS
Sbjct: 240 SQLLS 244
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 100/179 (55%), Gaps = 6/179 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+ L K++ + N+ Y+ +I FC+ +S A L +M+ P++ T +SL+ G
Sbjct: 30 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 89
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
+C + +A++L+D+M+ P+ TF L+ GL K ++ M+++G +PN
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 149
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+VTY +++G C G+++ A ++LN M + + DV + II+ LCK + VD+AL L
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+L R++ + ++ + V Y+T+I D +A ++ +M++ + P++ T++ L+ G
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNV 122
C G L++A+ + D M I + Y + +++G+CK GKV + +GVKPNV
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
VTYN+++ G C + +A +L M + G PD Y +I
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 49 MLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
M+ R LP++F FN L+ + ISL ++M I N YT+NIL++ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 109 V------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTV 162
+ L MMK G +P++VT +SL++GYC ++ A +++ M + G PD +T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 163 IINGLCKIKMVDEALTLL 180
+I+GL EA+ L+
Sbjct: 121 LIHGLFLHNKASEAVALV 138
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P++ ++ ++ + K K L +M I N++T+N LI FC + A++
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYC 133
LL +M+ +P+ T + LL+G C ++ + M++ G +P+ +T+ +L+ G
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
L + ++A +++ M Q G P++ Y V++NGLCK +D A LL+
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 61/110 (55%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L++ ++ + ++ +Y+T+I CK V D +DL+ + K + PNV T+
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA 111
N++I G C LL+EA +LL +M P++ T+N L+ ++G A
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 9/198 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
GQT +++LLRK+E + + + V YS II CKD + +AF+L++EM K ++ +
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+LI GFC G + LL +MI + I P+ F+ L+D KEGK+ M++
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ P+ VTY SL+DG+C +++KA +L+ M G P+++ + ++ING CK ++D+
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 176 ALTL---LSLQKWTAKTL 190
L L +SL+ A T+
Sbjct: 406 GLELFRKMSLRGVVADTV 423
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 104/185 (56%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ R + +L +++ + + P+ V Y+++I FCK+ + A + M++K PN+ TF
Sbjct: 331 GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N LI G+C L+ + + L +M ++ + + T+N L+ G C+ GK + M+
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ V+P++V+Y L+DG C GE KA +I + +S + D+ Y +II+G+C VD+
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 176 ALTLL 180
A L
Sbjct: 511 AWDLF 515
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 93/162 (57%), Gaps = 6/162 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN+ ++ +I +CK L+ D +L+ +M + ++ + T+N+LI GFC +G L+ A L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM+ + + P+ ++ ILLDGLC G ++ + K ++ ++ YN ++ G C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+V+ A D+ S+ GV PDV+ Y ++I GLCK + EA
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L L +++E K + N+ S +I C+ + +S AF +++ P+ TF++LI G
Sbjct: 92 LDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
C+ G + EA+ L+D M+ P T N L++GLC GKV + M++ G +PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
VTY ++ C G+ A ++L M + + D Y++II+GLCK +D A L +
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ V +ST+I C + VS+A +L M+ P + T N+L+ G C+ G + +A+ L
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
+D M+ PN T+ +L +CK G+ +L M ++ +K + V Y+ ++DG C
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G ++ A ++ N M G D+ YT +I G C D+ LL
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++ L +++ P ++ +S + + K DL +M K I N++T + +I
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKP 120
C L A S + ++I +P+ TF+ L++GLC EG+V M++ G KP
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
++T N+L++G CL G+V+ A +++ M ++G P+ Y ++ +CK A+ LL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 93/187 (49%), Gaps = 6/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + +L +++ + V P++V Y ++ C + A +++ ++ ++ ++
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
+N +I+G C + +A L + +K + P+ T+NI++ GLCK+G + M
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ G PN TYN L+ + G+ K+ ++ + + G + D ++++ L ++
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKK 614
Query: 175 EALTLLS 181
L +LS
Sbjct: 615 SFLDMLS 621
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G T + LL K+E + P V++Y+TII CK K + DA +L+ EM K I PNV T+
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+SLI C G +A LL +MI + I+P+ +TF+ L+D KEGK++ M+K
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P++VTY+SL++G+C+ +++AK + M PDV Y +I G CK K V+E
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 176 ALTLL 180
+ +
Sbjct: 415 GMEVF 419
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 95/182 (52%), Gaps = 6/182 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
Q+ + K P+VV Y+T+I FCK K V + +++ EM + ++ N T+N LI G
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
G A + EM+ + PN T+N LLDGLCK GK V + + ++P +
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
TYN +++G C G+V D+ +++ GV PDV Y +I+G C+ +EA L
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 183 QK 184
K
Sbjct: 562 MK 563
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V YS++I FC + +A ++ M++K P+V T+N+LI GFC ++E + +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM + + N T+NIL+ GL + G ++ M+ GV PN++TYN+L+DG C
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G++ KA + + +S + P + Y ++I G+CK V++ L
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 10/187 (5%)
Query: 5 RASLQLLRKIEGKLVM----PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
R+ L L + GK++ PN+V S+++ +C K +S+A L +M PN T
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-----LAVMMK 115
FN+LI+G + EA++L+D M+ K P+ T+ ++++GLCK G L M+
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 116 QG-VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
QG ++P V+ YN+++DG C ++ A ++ M G+ P+V Y+ +I+ LC
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308
Query: 175 EALTLLS 181
+A LLS
Sbjct: 309 DASRLLS 315
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N YS +I FC+ + A + +M+ PN+ T +SL+ G+C + EA++L+
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 82 DEMIMKNIDPNAYTFNILLDGLC---KEGKVLAV---MMKQGVKPNVVTYNSLMDGYCLV 135
D+M + PN TFN L+ GL K + +A+ M+ +G +P++VTY +++G C
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G+ + A ++LN M Q + P V Y II+GLCK K +D+AL L
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 39 VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI 98
+ DA L+ EM+ R P++ F+ L+ + ISL ++M I N YT++I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 99 LLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
L++ C+ + VL MMK G +PN+VT +SL++GYC +++A +++ M +G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLL 180
P+ + +I+GL EA+ L+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALI 209
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 87/186 (46%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + ++ +++ V PN++ Y+T++ CK+ + A ++ + ++ P ++T+
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N +I G C G +++ L + +K + P+ +N ++ G C++G + M +
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G PN YN+L+ G+ + +++ M G D ++ N L ++
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 624
Query: 176 ALTLLS 181
L +LS
Sbjct: 625 FLDMLS 630
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 107/185 (57%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + LL K+E + NVV+YST+I S CK + DA +L++EM K + PNV T+
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+SLI C +A LL +MI + I+PN TFN L+D KEGK++ M+K
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P++ TY+SL++G+C+ +++AK + M P+V Y +ING CK K +DE
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 176 ALTLL 180
+ L
Sbjct: 419 GVELF 423
Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K PNVV Y+T+I FCK K + + +L+ EM + ++ N T+ +LI+GF
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMD 130
A + +M+ + PN T+N LLDGLCK GK V + + ++P + TYN +++
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G C G+V D+ S++ GV PDV Y +I+G C+ + +EA L
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++ YS++I FC + +A ++ M++K PNV T+N+LI GFC + E + L
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 81 LDEMIMKNIDPNAYTFNILLDGL-----CKEGK-VLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM + + N T+ L+ G C + V M+ GV PN++TYN+L+DG C
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G++ KA + + +S + P + Y ++I G+CK V++ L
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Score = 100 bits (248), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q +L LL K+ P++V S+++ +C K +SDA L +M+ P+ TF
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ 116
+LI+G + EA++L+D M+ + PN T+ ++++GLCK G + L M
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
++ NVV Y++++D C + A ++ M GV P+V Y+ +I+ LC + +A
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA 314
Query: 177 LTLLS 181
LLS
Sbjct: 315 SRLLS 319
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 102/186 (54%), Gaps = 6/186 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ ++ L+ ++ + PN+V Y ++ CK + AF+L ++M A +I NV ++
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAVMMKQ 116
++I C +A++L EM K + PN T++ L+ LC ++L+ M+++
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ PNVVT+N+L+D + G++ +A+ + + M + + PD+ Y+ +ING C +DEA
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 177 LTLLSL 182
+ L
Sbjct: 385 KHMFEL 390
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 92/155 (59%), Gaps = 6/155 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
++L R++ + ++ N V Y+T+I F + + +A ++ +M++ + PN+ T+N+L+ G
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
C G L++A+ + + + ++P YT+NI+++G+CK GKV + +GVKP+
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD 156
V+ YN+++ G+C G +A + M + G PD
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 101/180 (56%), Gaps = 6/180 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+ L K++ + N+ Y+ +I FC+ +S A L +M+ P++ T +SL+ G
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
+C + +A++L+D+M+ P+ TF L+ GL K ++ M+++G +PN
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+VTY +++G C G+++ A ++LN M + + +V Y+ +I+ LCK + D+AL L +
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y I+ + + DA L+ M+ R LP++F FN L+ + ISL ++M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 86 MKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
I N YT+NIL++ C+ ++ L MMK G +P++VT +SL++GYC ++
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
A +++ M + G PD +T +I+GL EA+ L+
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P++ ++ ++ + K K L +M I N++T+N LI FC + A++
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYC 133
LL +M+ +P+ T + LL+G C ++ + M++ G +P+ +T+ +L+ G
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
L + ++A +++ M Q G P++ Y V++NGLCK +D A LL+
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++ + ++ + P + Y+ +I CK V D +DL+ + K + P+V +
Sbjct: 484 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYT 95
N++I GFC GL +EA +L +M P++ T
Sbjct: 544 NTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 115/190 (60%), Gaps = 7/190 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +LLR + + + PNV+ ++ +I +F K+ + +A +LY EM+ + ++PNVFT+
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
NSLI GFCI G L +A + D M+ K P+ T+N L+ G CK +V M
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
QG+ + TYN+L+ GYC G++N A+ + N M GV+PD+ Y ++++ LC +++
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 176 ALTLLS-LQK 184
AL ++ LQK
Sbjct: 413 ALVMVEDLQK 422
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 105/182 (57%), Gaps = 6/182 (3%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
+ ++ L+ ++G +PNVV+Y+T+I CK++ +++A +++ M K I + T+N+L
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGV 118
I G G +A LL +M+ + IDPN F L+D KEG +L M+++ V
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
PNV TYNSL++G+C+ G + AK + + M G PDV Y +I G CK K V++ +
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 345
Query: 179 LL 180
L
Sbjct: 346 LF 347
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 6/174 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K P+VV Y+T+I FCK K V D L+ EM + ++ + FT+N+LI+G+C G L
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------KQGVKPNVVTYNSLMD 130
A + + M+ + P+ T+NILLD LC GK+ ++ K + +++TYN ++
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
G C ++ +A + S+ + GV PD Y +I+GLC+ + EA L K
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+ L K+E + ++ ++ +I FC+ +S A L +M+ P++ T SL+ G
Sbjct: 99 IYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG 158
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPN 121
FC +EA+SL+D M PN +N +++GLCK +V M K+G++ +
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 218
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
VTYN+L+ G G A +L M + + P+V +T +I+ K + EA L
Sbjct: 219 AVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 276
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 41 DAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL 100
DAF L+ EML R +P++ F ++ + I L +M I + Y+F IL+
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 101 DGLCK------EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVT 154
C+ +L MMK G +P++VT SL++G+C +A +++SM G
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 155 PDVQCYTVIINGLCKIKMVDEALTLL 180
P+V Y +INGLCK + ++ AL +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVF 207
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P++V Y+ ++ C + + A + ++ + ++ T+N +I G C LKEA
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYN-SLMDG 131
L + K + P+A + ++ GLC++G K+ M + G P+ Y+ +L D
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
Query: 132 Y-CLVGEVNKA 141
Y L E+ KA
Sbjct: 510 YTSLSAELIKA 520
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 137 bits (344), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L L RK+E + + +VV YS +I S CKD DA L++EM K I +V T+
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+SLI G C G + +L EMI +NI P+ TF+ L+D KEGK+L M+
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ P+ +TYNSL+DG+C +++A + + M G PD+ Y+++IN CK K VD+
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 176 ALTLL 180
+ L
Sbjct: 404 GMRLF 408
Score = 127 bits (318), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 115/195 (58%), Gaps = 6/195 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++LR++ G+ ++P+VV +S +I F K+ + +A +LY+EM+ + I P+ T+
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
NSLI GFC L EA + D M+ K +P+ T++IL++ CK +V +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ PN +TYN+L+ G+C G++N AK++ M GV P V Y ++++GLC +++
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 176 ALTLLSLQKWTAKTL 190
AL + + + TL
Sbjct: 474 ALEIFEKMQKSRMTL 488
Score = 120 bits (300), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V YS +I S+CK K V D L+ E+ +K ++PN T+N+L+ GFC G L A L
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM+ + + P+ T+ ILLDGLC G ++ M K + + YN ++ G C
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+V+ A + S++ GV PDV Y V+I GLCK + EA L K
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 106/185 (57%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L ++ + + P+ + Y+++I FCK+ + +A ++ M++K P++ T+
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+ LI +C + + + L E+ K + PN T+N L+ G C+ GK+ A M+
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+GV P+VVTY L+DG C GE+NKA +I M +S +T + Y +II+G+C VD+
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 176 ALTLL 180
A +L
Sbjct: 509 AWSLF 513
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 93/165 (56%), Gaps = 6/165 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
++L R+I K ++PN + Y+T++ FC+ ++ A +L+ EM+++ + P+V T+ L+ G
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
C G L +A+ + ++M + +NI++ G+C KV + +GVKP+
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
VVTYN ++ G C G +++A + M + G TPD Y ++I
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ + +ST++ FC + VS+A L M+ + P++ T ++LI G C+ G + EA+ L
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG-KVLAV-----MMKQGVKPNVVTYNSLMDGYCL 134
+D M+ P+ T+ +L+ LCK G LA+ M ++ +K +VV Y+ ++D C
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G + A + N M G+ DV Y+ +I GLC D+ +L
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 6/161 (3%)
Query: 27 STIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIM 86
+ +I +C+ K + AF + P+ TF++L+ GFC+ G + EA++L+D M+
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 87 KNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
P+ T + L++GLC +G+V + M++ G +P+ VTY +++ C G
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
A D+ M + + V Y+++I+ LCK D+AL+L +
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 39 VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI 98
V+DA DL+ M+ R LP FN L + M + I+ + YT I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 99 LLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
+++ C++ K VL K G +P+ +T+++L++G+CL G V++A +++ M +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLL 180
PD+ + +INGLC V EAL L+
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLI 198
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 92/186 (49%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ A+ +L +++ + V P+VV Y ++ C + ++ A +++ +M R+ + +
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N +I+G C + +A SL + K + P+ T+N+++ GLCK+G + M +
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G P+ TYN L+ + + + +++ M G + D ++I+ L ++
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKS 613
Query: 176 ALTLLS 181
L +LS
Sbjct: 614 FLDMLS 619
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 136 bits (343), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L LL+K+E + +VV+Y+TII CK K + DA +L++EM K I P+VFT+
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+SLI C G +A LL +MI + I+PN TF+ L+D KEGK++ M+K
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P++ TY+SL++G+C+ +++AK + M P+V Y+ +I G CK K V+E
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 176 ALTLL 180
+ L
Sbjct: 417 GMELF 421
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 98/174 (56%), Gaps = 6/174 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K PNVV YST+I FCK K V + +L+ EM + ++ N T+ +LI+GF
Sbjct: 392 KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMD 130
A + +M+ + PN T+NILLDGLCK GK V + + ++P++ TYN +++
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
G C G+V ++ +++ GV+P+V Y +I+G C+ +EA +LL K
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V S+++ +C K +SDA L +M+ P+ FTF +LI+G + EA++L
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
+D+M+ + P+ T+ +++GLCK G + L M K ++ +VV YN+++DG C
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
++ A ++ M G+ PDV Y+ +I+ LC +A LLS
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++ YS++I FC + +A ++ M++K PNV T+++LI GFC ++E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 81 LDEMIMKNIDPNAYTFNILLDGL-----CKEGK-VLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM + + N T+ L+ G C + V M+ GV PN++TYN L+DG C
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G++ KA + + +S + PD+ Y ++I G+CK V++ L
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 95/170 (55%), Gaps = 6/170 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ ++L R++ + ++ N V Y+T+I F + + +A ++ +M++ + PN+ T+N
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ 116
L+ G C G L +A+ + + + ++P+ YT+NI+++G+CK GKV + +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK 532
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
GV PNV+ YN+++ G+C G +A +L M + G P+ Y +I
Sbjct: 533 GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 95/169 (56%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ ++ YS I FC+ +S A + ++M+ P++ T +SL+ G+C + +A+
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
+L+D+M+ P+ +TF L+ GL K M+++G +P++VTY ++++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C G+++ A +L M + + DV Y II+GLCK K +D+AL L +
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFT 282
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 95/168 (56%), Gaps = 6/168 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V Y T++ CK + A L +M +I +V +N++I G C + +A++L
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL 280
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM K I P+ +T++ L+ LC G+ +L+ M+++ + PNVVT+++L+D +
Sbjct: 281 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 340
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
G++ +A+ + + M + + PD+ Y+ +ING C +DEA + L
Sbjct: 341 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 39 VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI 98
V DA DL+ +M+ R P++ FN L+ + + ISL ++M I + YT++I
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 99 LLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
++ C+ + VLA MMK G +P++VT +SL++GYC ++ A +++ M + G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLL 180
PD +T +I+GL EA+ L+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALV 211
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V PN++ Y+ ++ CK+ ++ A ++ + + P+++T+N +I G C G +++
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
L + +K + PN +N ++ G C++G +L M + G PN TYN+L+
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G+ + +++ M G D ++ N L ++ L +LS
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 632
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V ++ ++ + K L +M I +++T++ I FC L A+++
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
L +M+ +P+ T + LL+G C ++ + M++ G KP+ T+ +L+ G L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ ++A +++ M Q G PD+ Y ++NGLCK +D AL+LL
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++ + ++ + P++ Y+ +I CK V D ++L+ + K + PNV +
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG 107
N++I GFC G +EA SLL +M PN+ T+N L+ ++G
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 136 bits (343), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 110/185 (59%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L LL+K+E + +VV+Y+TII + C K V+DA +L++EM K I PNV T+
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
NSLI C G +A LL +MI + I+PN TF+ L+D KEGK++ M+K
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P++ TY+SL++G+C+ +++AK + M P+V Y +I G CK K V+E
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 176 ALTLL 180
+ L
Sbjct: 414 GMELF 418
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 96/170 (56%), Gaps = 6/170 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PNVV Y+T+I FCK K V + +L+ EM + ++ N T+N+LI G G A +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
+M+ + P+ T++ILLDGLCK GK V + K ++P++ TYN +++G C
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
G+V D+ S++ GV P+V YT +I+G C+ + +EA L K
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 93/166 (56%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++ YS++I FC + +A ++ M++K PNV T+N+LI GFC ++E + L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM + + N T+N L+ GL + G K+ M+ GV P+++TY+ L+DG C
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G++ KA + + +S + PD+ Y ++I G+CK V++ L
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Score = 103 bits (258), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 10/187 (5%)
Query: 5 RASLQLLRKIEGKLVM----PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
R+ L L + GK++ P++V S+++ +C K +S+A L +M PN T
Sbjct: 128 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVT 187
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
FN+LI+G + EA++L+D M+ + P+ +T+ +++GLCK G + L M
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
K ++ +VV Y +++D C VN A ++ M G+ P+V Y +I LC
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 175 EALTLLS 181
+A LLS
Sbjct: 308 DASRLLS 314
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 90/162 (55%), Gaps = 6/162 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+ +I FC+ + A + +M+ P++ T +SL+ G+C + EA++L+D+M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 86 MKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ PN TFN L+ GL K ++ M+ +G +P++ TY ++++G C G+++
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
A +L M + + DV YT II+ LC K V++AL L +
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFT 279
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ ++ L+ ++ + P++ Y T++ CK + A L +M +I +V +
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQ 116
++I C + +A++L EM K I PN T+N L+ LC G+ +L+ M+++
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ PNVVT+++L+D + G++ +A+ + + M + + PD+ Y+ +ING C +DEA
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 177 LTLLSL 182
+ L
Sbjct: 380 KHMFEL 385
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 41/186 (22%)
Query: 36 DKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYT 95
D + DA DL+ EM+ R LP++ FN L+ + ISL + M I + Y+
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 96 FNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYC----------LVGEV- 138
+NIL++ C+ + VL MMK G +P++VT +SL++GYC LV ++
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 139 ---------------------NKAKD---ILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
NKA + +++ M G PD+ Y ++NGLCK +D
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 175 EALTLL 180
AL+LL
Sbjct: 238 LALSLL 243
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + ++ +K+ V P+++ YS ++ CK + A ++ + ++ P+++T+
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N +I G C G +++ L + +K + PN + ++ G C++G + M +
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G PN TYN+L+ G+ + +++ M G D +++IN L ++
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623
Query: 176 ALTLLS 181
L +LS
Sbjct: 624 YLEMLS 629
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 7/190 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + QLLR + K + P++V +S +I +F K++ VS+A ++Y EML I P T+
Sbjct: 59 GRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
NS+I GFC + +A +LD M K P+ TF+ L++G CK +V M +
Sbjct: 119 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 178
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ N VTY +L+ G+C VG+++ A+D+LN M GV PD + ++ GLC K + +
Sbjct: 179 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 238
Query: 176 ALTLLS-LQK 184
A +L LQK
Sbjct: 239 AFAILEDLQK 248
Score = 127 bits (318), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 97/168 (57%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ +VV+ + I+ CKD +A +L++EM K I PNV T+N +I FC G +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
LL MI K I+P+ TF+ L++ KE KV M++ + P +TYNS++DG+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C V+ AK +L+SMA G +PDV ++ +ING CK K VD + +
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 99/178 (55%), Gaps = 6/178 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
L ++ K + PNV+ Y+ +I SFC SDA L M+ K+I P++ TF++LI F
Sbjct: 32 LFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFV 91
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVV 123
+ EA + EM+ +I P T+N ++DG CK+ +V L M +G P+VV
Sbjct: 92 KERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVV 151
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
T+++L++GYC V+ +I M + G+ + YT +I+G C++ +D A LL+
Sbjct: 152 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 209
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 6/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++ L+ K+E P+VV+Y+TII CK LV+DA +L+ M + + T+NSL+
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
G C G +A L+ +M+M++I PN TF ++D KEG K+ M ++ V P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+V TYNSL++G C+ G V++AK +L+ M G PDV Y +ING CK K VDE L
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 114/190 (60%), Gaps = 10/190 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L+R + + ++PNV+ ++ +I F K+ S+A LY EM + + P+VFT+
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK-----EG-KVLAVMMK 115
NSLI G C+ G + EA +LD M+ K P+ T+N L++G CK EG K+ M +
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ + +TYN+++ GY G + A++I + M P+++ Y++++ GLC V++
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEK 399
Query: 176 ALTLL-SLQK 184
AL L ++QK
Sbjct: 400 ALVLFENMQK 409
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 6/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G +++L ++E V + V Y++++ C SDA L +M+ + I+PNV T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
F ++I F G EA+ L +EM + +DP+ +T+N L++GLC G+V L +M+
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+G P+VVTYN+L++G+C V++ + MAQ G+ D Y II G + D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 175 EALTLLS 181
A + S
Sbjct: 367 AAQEIFS 373
Score = 103 bits (258), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + Q+L + K +P+VV Y+T+I FCK K V + L+ EM + ++ + T+
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
N++I G+ G A + M + PN T++ILL GLC +V M K
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
++ ++ TYN ++ G C +G V A D+ S++ G+ PDV YT +I+G C+ + D+
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 176 A 176
+
Sbjct: 470 S 470
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 39 VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI 98
+ + DL+ +M+ R LP++ F+ ++ ISL M + I + Y++NI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 99 LLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
+++ LC+ + V+ MMK G +P+VVT +SL++G+C V A D+++ M + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLL 180
PDV Y II+G CKI +V++A+ L
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+ L +E + ++ Y+ +I C+ A + +M+ P+V T +SLI G
Sbjct: 89 ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPN 121
FC + +AI L+ +M P+ +N ++DG CK G ++ M + GV+ +
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
VTYNSL+ G C G + A ++ M + P+V +T +I+ K EA+ L
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
++P+ V+Y+T+I FCK + A + EM ++ I P+V T+ ++I GFC +G + EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
L EM K ++P++ TF L++G CK G +V M++ G PNVVTY +L+DG
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C G+++ A ++L+ M + G+ P++ Y I+NGLCK ++EA+ L+
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G RA+ + ++ + + P+V+ Y+ II FC+ + +A L+ EM K + P+ TF
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
LI G+C G +K+A + + MI PN T+ L+DGLCKEG ++L M K
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G++PN+ TYNS+++G C G + +A ++ +G+ D YT +++ CK +D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 176 ALTLL 180
A +L
Sbjct: 545 AQEIL 549
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 41/205 (20%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PNVV Y+T+I CK+ + A +L EM + PN+FT+NS++ G C G ++EA+ L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 81 -----------------------------------LDEMIMKNIDPNAYTFNILLDGLCK 105
L EM+ K + P TFN+L++G C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 106 EG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQC 159
G K+L M+ +G+ PN T+NSL+ YC+ + A I M GV PD +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 160 YTVIINGLCKIKMVDEALTLLSLQK 184
Y ++ G CK + + EA L K
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMK 658
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + + LL +E K P+V+ YST++ +C+ + + L M K + PN +
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
+ S+I C + L EA EMI + I P+ + L+DG CK G + A M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ + P+V+TY +++ G+C +G++ +A + + M G+ PD +T +ING CK +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 175 EALTL 179
+A +
Sbjct: 439 DAFRV 443
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 6/181 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +++L+ + E + + V Y+T++ ++CK + A ++ EML K + P + TF
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N L+ GFC+ G+L++ LL+ M+ K I PNA TFN L+ C + A M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+GV P+ TY +L+ G+C + +A + M G + V Y+V+I G K K E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 176 A 176
A
Sbjct: 685 A 685
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+T ++ + R+ V NV Y+ +I C+ + +A L M K P+V +++
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAVMMKQ 116
+++ G+C G L + L++ M K + PN+Y + ++ LC+ + + M++Q
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G+ P+ V Y +L+DG+C G++ A M +TPDV YT II+G C+I + EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 177 LTLLS 181
L
Sbjct: 406 GKLFH 410
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 56 PNVF-TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM 114
P VF F ++ F GLL+EA + ++M+ + + + N+ L L K+ A +
Sbjct: 175 PRVFDVFFQVLVDF---GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAI 231
Query: 115 -------KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+ GV NV +YN ++ C +G + +A +L M G TPDV Y+ ++NG
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 168 CKIKMVDEALTLLSLQK 184
C+ +D+ L+ + K
Sbjct: 292 CRFGELDKVWKLIEVMK 308
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
++P+ V+Y+T+I FCK + A + EM ++ I P+V T+ ++I GFC +G + EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
L EM K ++P++ TF L++G CK G +V M++ G PNVVTY +L+DG
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C G+++ A ++L+ M + G+ P++ Y I+NGLCK ++EA+ L+
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G RA+ + ++ + + P+V+ Y+ II FC+ + +A L+ EM K + P+ TF
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
LI G+C G +K+A + + MI PN T+ L+DGLCKEG ++L M K
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G++PN+ TYNS+++G C G + +A ++ +G+ D YT +++ CK +D+
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 176 ALTLL 180
A +L
Sbjct: 545 AQEIL 549
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 41/205 (20%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PNVV Y+T+I CK+ + A +L EM + PN+FT+NS++ G C G ++EA+ L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 81 -----------------------------------LDEMIMKNIDPNAYTFNILLDGLCK 105
L EM+ K + P TFN+L++G C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 106 EG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQC 159
G K+L M+ +G+ PN T+NSL+ YC+ + A I M GV PD +
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 160 YTVIINGLCKIKMVDEALTLLSLQK 184
Y ++ G CK + + EA L K
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMK 658
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + + LL +E K P+V+ YST++ +C+ + + L M K + PN +
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
+ S+I C + L EA EMI + I P+ + L+DG CK G + A M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ + P+V+TY +++ G+C +G++ +A + + M G+ PD +T +ING CK +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 175 EALTL 179
+A +
Sbjct: 439 DAFRV 443
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 6/181 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +++L+ + E + + V Y+T++ ++CK + A ++ EML K + P + TF
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N L+ GFC+ G+L++ LL+ M+ K I PNA TFN L+ C + A M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+GV P+ TY +L+ G+C + +A + M G + V Y+V+I G K K E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 176 A 176
A
Sbjct: 685 A 685
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+T ++ + R+ V NV Y+ +I C+ + +A L M K P+V +++
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAVMMKQ 116
+++ G+C G L + L++ M K + PN+Y + ++ LC+ + + M++Q
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G+ P+ V Y +L+DG+C G++ A M +TPDV YT II+G C+I + EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 177 LTLLS 181
L
Sbjct: 406 GKLFH 410
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 56 PNVF-TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM 114
P VF F ++ F GLL+EA + ++M+ + + + N+ L L K+ A +
Sbjct: 175 PRVFDVFFQVLVDF---GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAI 231
Query: 115 -------KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+ GV NV +YN ++ C +G + +A +L M G TPDV Y+ ++NG
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 168 CKIKMVDEALTLLSLQK 184
C+ +D+ L+ + K
Sbjct: 292 CRFGELDKVWKLIEVMK 308
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 133 bits (335), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 116/186 (62%), Gaps = 6/186 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + ++++L ++ + PN V Y+T+I + CK+ V +A +L + +K ILP+V T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--MMKQ-- 116
FNSLI G C+ + A+ L +EM K +P+ +T+N+L+D LC +GK+ M+KQ
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 117 --GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G +V+TYN+L+DG+C + +A++I + M GV+ + Y +I+GLCK + V+
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 175 EALTLL 180
+A L+
Sbjct: 523 DAAQLM 528
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 101/182 (55%), Gaps = 6/182 (3%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
R +++L ++ K P+ Y+ +I S C + +A ++ +M +V T+N+L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGV 118
I GFC +EA + DEM + + N+ T+N L+DGLCK +V + M+ +G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
KP+ TYNSL+ +C G++ KA DI+ +M +G PD+ Y +I+GLCK V+ A
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 179 LL 180
LL
Sbjct: 597 LL 598
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ ++T++ CK V A ++ ML + P+V+T+NS+I G C +G +KEA+ +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
LD+MI ++ PN T+N L+ LCKE +V V+ +G+ P+V T+NSL+ G CL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
A ++ M G PD Y ++I+ LC +DEAL +L
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L +L+++E +V+ Y+T+I FCK +A +++ EM + N T+
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+LI G C +++A L+D+MIM+ P+ YT+N LL C+ G ++ M
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G +P++VTY +L+ G C G V A +L S+ G+ Y +I GL + + E
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 176 ALTLL 180
A+ L
Sbjct: 629 AINLF 633
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 11/185 (5%)
Query: 7 SLQLLRKIEGKL----VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
SL+L+ K+ + P+V ++ +I + C+ + A + +M + ++P+ TF
Sbjct: 169 SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ 116
+++ G+ G L A+ + ++M+ + + N+++ G CKEG+V + M Q
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQ 288
Query: 117 -GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G P+ T+N+L++G C G V A +I++ M Q G PDV Y +I+GLCK+ V E
Sbjct: 289 DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
Query: 176 ALTLL 180
A+ +L
Sbjct: 349 AVEVL 353
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 7/173 (4%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+TR + ++ ++E V N V Y+T+I CK + V DA L +M+ + P+ +T+N
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ 116
SL+ FC G +K+A ++ M +P+ T+ L+ GLCK G+V L + +
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM-AQSGVTPDVQCYTVIINGLC 168
G+ YN ++ G + +A ++ M Q+ PD Y ++ GLC
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 46 YSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK 105
+++M I P+V TFN LI C L+ AI +L++M + P+ TF ++ G +
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 106 EG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMA-QSGVTPDVQ 158
EG ++ M++ G + V+ N ++ G+C G V A + + M+ Q G PD
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 159 CYTVIINGLCKIKMVDEALTLLSL 182
+ ++NGLCK V A+ ++ +
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDV 320
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 10/168 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V Y T+I CK V A L + K I +N +I G EAI+L
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINL 632
Query: 81 LDEMIMKN-IDPNAYTFNILLDGLCKEG-------KVLAVMMKQGVKPNVVTYNSLMDGY 132
EM+ +N P+A ++ I+ GLC G L ++++G P + L +G
Sbjct: 633 FREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ ++N + Q + + ++ GL KI+ +AL L
Sbjct: 693 LTLSMEETLVKLVNMVMQKARFSEEE--VSMVKGLLKIRKFQDALATL 738
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 96/166 (57%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V Y+ II S CK K V+DAFD + E+ K I PNV T+ +L+ G C +A L
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCL 134
L +MI K I PN T++ LLD K GKVL M++ + P++VTY+SL++G CL
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+++A + + M G DV Y +ING CK K V++ + L
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 6/181 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+ ++IE K + PNVV Y+ ++ C SDA L S+M+ K+I PNV T+++L+
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKP 120
F G + EA L +EM+ +IDP+ T++ L++GLC ++ +M+ +G
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+VV+YN+L++G+C V + M+Q G+ + Y +I G + VD+A
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 181 S 181
S
Sbjct: 389 S 389
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 99/182 (54%), Gaps = 6/182 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
Q+ + K + +VV Y+T+I FCK K V D L+ EM + ++ N T+N+LI GF
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
G + +A +M I P+ +T+NILL GLC G+ + M K+ + ++
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
VTY +++ G C G+V +A + S++ G+ PD+ YT +++GLC ++ E L +
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 183 QK 184
K
Sbjct: 496 MK 497
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ V +++ FC+ VSDA L +M+ P++ +N++I C + +A
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMKQGVKPNVVTYNSLMDGYCL 134
E+ K I PN T+ L++GLC ++L+ M+K+ + PNV+TY++L+D +
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
G+V +AK++ M + + PD+ Y+ +INGLC +DEA + L
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L ++ + P++V YS++I C + +A ++ M++K L +V ++
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
N+LI GFC +++ + L EM + + N T+N L+ G + G V + M
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G+ P++ TYN L+ G C GE+ KA I M + + D+ YT +I G+CK V+E
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 176 ALTLL 180
A +L
Sbjct: 454 AWSLF 458
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 87/167 (52%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V ++ ++ + K K L +M I +++TFN +I FC + A+S+
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
L +M+ +P+ T L++G C+ +V + M++ G KP++V YN+++D C
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
VN A D + + G+ P+V YT ++NGLC +A LLS
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS 249
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 6/152 (3%)
Query: 35 KDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAY 94
+D ++DA DL+S+M+ R P++ FN L+ + ISL +M + I + Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 95 TFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
TFNI+++ C +V L M+K G +P+ VT SL++G+C V+ A +++ M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 149 AQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ G PD+ Y II+ LCK K V++A
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
++L R++ + ++ N V Y+T+I F + V A + +S+M I P+++T+N L+ G
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
C G L++A+ + ++M + +D + T+ ++ G+CK GKV + +G+KP+
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
+VTY ++M G C G +++ + + M Q G+
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L + ++ + + ++V Y+T+I CK V +A+ L+ + K + P++ T+
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG-LCKEGKVLAVMMKQGVKP 120
+++ G C GLL E +L +M + + N T L DG + +++ M+ G P
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT---LSDGDITLSAELIKKMLSCGYAP 530
Query: 121 NVV 123
+++
Sbjct: 531 SLL 533
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 99/168 (58%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P+VVMY+TII S CK+ V+ A L+ +M I P+V + SL+ G C G ++A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
SLL M + I P+ TFN L+D KEGK L M++ + PN+ TY SL++G+
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C+ G V++A+ + M G PDV YT +ING CK K VD+A+ +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 108/190 (56%), Gaps = 7/190 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ R + LLR + + + P+V+ ++ +I +F K+ DA +LY+EM+ I PN+FT+
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAVMMK 115
SLI GFC+ G + EA + M K P+ + L++G CK K+ M +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ N +TY +L+ G+ VG+ N A+++ + M GV P+++ Y V+++ LC V +
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 176 ALTLLS-LQK 184
AL + +QK
Sbjct: 406 ALMIFEDMQK 415
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L L ++E + P+VVMY++++ C DA L M ++I P+V TF
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+LI F G +A L +EMI +I PN +T+ L++G C EG ++ +M
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G P+VV Y SL++G+C +V+ A I M+Q G+T + YT +I G ++ +
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 176 ALTLLS 181
A + S
Sbjct: 371 AQEVFS 376
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 9/188 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + Q+ +E K P+VV Y+++I FCK K V DA ++ EM K + N T+
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------- 114
+LI GF VG A + M+ + + PN T+N+LL LC GKV +M
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 115 --KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
GV PN+ TYN L+ G C G++ KA + M + + + YT+II G+CK
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475
Query: 173 VDEALTLL 180
V A+ L
Sbjct: 476 VKNAVNLF 483
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 94/168 (55%), Gaps = 6/168 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V ++++I FC + +A + ++M+ I P+V + ++I C G + A+SL
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
D+M I P+ + L++GLC G+ +L M K+ +KP+V+T+N+L+D +
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
G+ A+++ N M + + P++ YT +ING C VDEA + L
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L R ++ + Y I+ + ++A DL++ M+ R LP++ F
Sbjct: 16 GNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDF 75
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
L+ + I+L D + + + + YT N+L++ C+ + L MMK
Sbjct: 76 TKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMK 135
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G +P++VT+ SL++G+CL + +A ++N M + G+ PDV YT II+ LCK V+
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 176 ALTLL 180
AL+L
Sbjct: 196 ALSLF 200
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 87/162 (53%), Gaps = 9/162 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR---ILPNV 58
G+ + ++ + + V PN+ Y+ ++ C + V A ++ +M + + PN+
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNI 425
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAV 112
+T+N L++G C G L++A+ + ++M + +D T+ I++ G+CK GKV
Sbjct: 426 WTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCS 485
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVT 154
+ +GVKPNVVTY +++ G G ++A + M + GV+
Sbjct: 486 LPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 6/184 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q +L L + +P+++ ++ ++ K K +L + + +++T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQ 116
L+ FC A S L +M+ +P+ TF L++G C ++ M ++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G+KP+VV Y +++D C G VN A + + M G+ PDV YT ++NGLC +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 177 LTLL 180
+LL
Sbjct: 232 DSLL 235
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 130 bits (328), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 7/186 (3%)
Query: 2 GQTRAS--LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVF 59
G R S L L++++E + PN+ Y+ +I S C A +L +ML K ++PNV
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG-----KVLAVMM 114
T+N+LI G+C G++++A+ +++ M + + PN T+N L+ G CK VL M+
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML 454
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
++ V P+VVTYNSL+DG C G + A +L+ M G+ PD YT +I+ LCK K V+
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 175 EALTLL 180
EA L
Sbjct: 515 EACDLF 520
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 110/179 (61%), Gaps = 7/179 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+LL ++ K +MPNV+ Y+ +I +CK ++ DA D+ M ++++ PN T+N LI G+
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNV 122
C + K A+ +L++M+ + + P+ T+N L+DG C+ G ++L++M +G+ P+
Sbjct: 439 CKSNVHK-AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
TY S++D C V +A D+ +S+ Q GV P+V YT +I+G CK VDEA +L
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ + L +E K V PNVVMY+ +I +CK V +A + +ML+K LPN TFN
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ 116
+LI+G C G LKEA L ++M+ + P T IL+ L K+G M+
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G KP+ TY + + YC G + A+D++ M ++GV+PD+ Y+ +I G + + A
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 177 LTLLSLQKWTA 187
+L + T
Sbjct: 692 FDVLKRMRDTG 702
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++ L K++ P V Y+ +I S C + S+A +L EM I PN+ T+ LI
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
C ++A LL +M+ K + PN T+N L++G CK G V+ +M + + P
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
N TYN L+ GYC V+KA +LN M + V PDV Y +I+G C+ D A LL
Sbjct: 427 NTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 181 SL--------QKWTAKTL 190
SL +WT ++
Sbjct: 486 SLMNDRGLVPDQWTYTSM 503
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 109/205 (53%), Gaps = 13/205 (6%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G ++ ++ +E + + PN Y+ +I +CK V A + ++ML +++LP+V T+
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTY 465
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
NSLI G C G A LL M + + P+ +T+ ++D LCK +V + +
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC---KIK- 171
+GV PNVV Y +L+DGYC G+V++A +L M P+ + +I+GLC K+K
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 172 --MVDEALTLLSLQKWTAKTLFLIQ 194
+++E + + LQ + LI
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIH 610
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 6/188 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G + Q + KI + P+ Y+++I +C+ K + AF +++EM K N
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-KEGKVLAV-----MM 114
+ LI+G C+ + EA+ L +M P T+ +L+ LC E K A+ M
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ G+KPN+ TY L+D C + KA+++L M + G+ P+V Y +ING CK M++
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 175 EALTLLSL 182
+A+ ++ L
Sbjct: 411 DAVDVVEL 418
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+T++ S + LV + +Y EML ++ PN++T+N ++ G+C +G ++EA + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 86 MKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+DP+ +T+ L+ G C+ KV M +G + N V Y L+ G C+ ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTA 187
+A D+ M P V+ YTV+I LC + EAL L+ + T
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
++ +L K+ + V+P+VV Y+++I C+ A+ L S M + ++P+ +T+ S+
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGV 118
I C ++EA L D + K ++PN + L+DG CK GKV L M+ +
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
PN +T+N+L+ G C G++ +A + M + G+ P V T++I+ L K D A +
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ Y+T I ++C++ + DA D+ ++M + P++FT++SLI G+ +G A +
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 81 LDEMIMKNIDPNAYTFNILLDGLC--KEGK----------------------VLAVMMKQ 116
L M +P+ +TF L+ L K GK +L M++
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQS-GVTPDVQCYTVIINGLCKIKMVDE 175
V PN +Y L+ G C VG + A+ + + M ++ G++P + +++ CK+K +E
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 176 A 176
A
Sbjct: 815 A 815
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P V + +I KD A+ + +ML+ P+ T+ + I +C G L +A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDG- 131
++ +M + P+ +T++ L+ G G+ VL M G +P+ T+ SL+
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 132 --------------YCLVG---EVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
C + E + ++L M + VTP+ + Y +I G+C++
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-ILPNVFTFNSLIY 66
++LL K+ V PN Y +I C+ + A ++ M I P+ FN+L+
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKP 120
C + EA ++D+MI P + +L+ GL K+G+ V +++ G
Sbjct: 805 CCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYE 864
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
+ + + ++DG G V ++ N M ++G Q Y+++I G
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 108/187 (57%), Gaps = 6/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + L ++ K P+ Y+ +I + C L+ AF+L+ EM+ + PNV T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
+ LI G C G ++EA + +M+ I P+ T+N L++G CK+G+V L VM
Sbjct: 339 YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVME 398
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
K+ KPNV T+N LM+G C VG+ KA +L M +G++PD+ Y V+I+GLC+ ++
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 175 EALTLLS 181
A LLS
Sbjct: 459 TAYKLLS 465
Score = 120 bits (300), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 93/168 (55%), Gaps = 6/168 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PNV Y+ +I C+D + +A + +M+ RI P+V T+N+LI G+C G + A L
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
L M + PN TFN L++GLC+ GK +L M+ G+ P++V+YN L+DG C
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
G +N A +L+SM + PD +T IIN CK D A L L
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 106/186 (56%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + RK+ + P+V+ Y+ +I +CKD V AF+L + M + PNV TF
Sbjct: 350 GKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTF 409
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N L+ G C VG +A+ LL M+ + P+ ++N+L+DGLC+EG K+L+ M
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC 469
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
++P+ +T+ ++++ +C G+ + A L M + G++ D T +I+G+CK+ +
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRD 529
Query: 176 ALTLLS 181
AL +L
Sbjct: 530 ALFILE 535
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 103/195 (52%), Gaps = 11/195 (5%)
Query: 2 GQTRASLQLLRKI-EGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL--PNV 58
G T A+ + KI + V+ + + S ++G FC+ + DA ++ ++++K + PN
Sbjct: 209 GYTEAAEMFMSKILKIGFVLDSHIGTSLLLG-FCRGLNLRDALKVF-DVMSKEVTCAPNS 266
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAV 112
+++ LI+G C VG L+EA L D+M K P+ T+ +L+ LC G +
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
M+ +G KPNV TY L+DG C G++ +A + M + + P V Y +ING CK
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 173 VDEALTLLSLQKWTA 187
V A LL++ + A
Sbjct: 387 VVPAFELLTVMEKRA 401
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 41/222 (18%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ ++ LL+++ + P++V Y+ +I C++ ++ A+ L S M I P+ T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------------ 108
F ++I FC G A + L M+ K I + T L+DG+CK GK
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 109 ------------VLAVMMKQGVK-----------------PNVVTYNSLMDGYCLVGEVN 139
V+ M+ +G K P+VVTY +L+DG G++
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT 598
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ IL M SG P+V YT+IINGLC+ V+EA LLS
Sbjct: 599 GSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLS 640
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 41/217 (18%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +LL + + P+ + ++ II +FCK A ML K I + T
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNI-------------------------------- 89
+LI G C VG ++A+ +L+ ++ I
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574
Query: 90 ---DPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
P+ T+ L+DGL + G ++L +M G PNV Y +++G C G V +
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
A+ +L++M SGV+P+ YTV++ G +D AL
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+TR +L +L + ++ + I+ K V + + ++ ++P+V T
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVT 583
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
+ +L+ G G + + +L+ M + PN Y + I+++GLC+ G+V L+ M
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
GV PN VTY ++ GY G++++A + + +M + G + + Y+ ++ G
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ + L +L KI ++P+VV Y+T++ + ++ +F + M LPNV+ +
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYT 620
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ 116
+I G C G ++EA LL M + PN T+ +++ G GK+ + M+++
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Query: 117 GVKPNVVTYNSLMDGYCLV--GEVNKAKDILNSMAQSGVTPD 156
G + N Y+SL+ G+ L G N + ++ +A P+
Sbjct: 681 GYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPE 722
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P+V+ +S +I + K+ + +A Y+EM+ + + PN+ T+NSLI G CI GLL EA
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
+L+ ++ K PNA T+N L++G CK K+L VM + GV + TYN+L GY
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS-LQK 184
C G+ + A+ +L M GV PD+ + ++++GLC + +AL L LQK
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 104/180 (57%), Gaps = 6/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++ L+ +I G PNVV+Y+TII S C+ V+ A D+ M I P+V T+NSLI
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKP 120
G + +L +M+ I P+ TF+ L+D KEG++L M+++ V P
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
N+VTYNSL++G C+ G +++AK +LN + G P+ Y +ING CK K VD+ + +L
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 6/169 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K PN V Y+T+I +CK K V D + M + + FT+N+L G+C G
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSA 377
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMD 130
A +L M+ + P+ YTFNILLDGLC GK+ L + K ++TYN ++
Sbjct: 378 AEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIK 437
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
G C +V A + S+A GV+PDV Y ++ GL + ++ EA L
Sbjct: 438 GLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 41/223 (18%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+ + A + L R +E + ++ ++T+I FC+ +S A +M+ P++ T
Sbjct: 92 LNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVT 151
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------------- 107
F SL+ GFC V EA+SL+D+++ +PN +N ++D LC++G
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Query: 108 ----------------------------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
++L+ MM+ G+ P+V+T+++L+D Y G++
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
+AK N M Q V P++ Y +INGLC ++DEA +L++
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 40 SDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNIL 99
+DA L+ +M LP++ F+ L+ + + ISL + M I + Y+F L
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 100 LDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
+D C+ ++ L MMK G +P++VT+ SL++G+C V +A +++ + G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 154 TPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
P+V Y II+ LC+ V+ AL +L K
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 6/154 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P++V +S ++ + K L+ + I ++++F +LI FC L A+S
Sbjct: 76 LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVVTYNSLMDGYC 133
L +M+ +P+ TF L++G C + M + G +PNVV YN+++D C
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
G+VN A D+L M + G+ PDV Y +I L
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 6/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L + ++ G PNVV+Y+TII CK K V +A DL + M I P+V T+NSLI
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKP 120
G C G +A ++ M + I P+ +TFN L+D KEG+V M+++ + P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
++VTY+ L+ G C+ +++A+++ M G PDV Y+++ING CK K V+ + L
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K P+VV YS +I +CK K V L+ EM + ++ N T+ LI G+C G L
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMD 130
A + M+ + PN T+N+LL GLC GK +LA M K G+ ++VTYN ++
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR 439
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
G C GEV A DI S+ G+ PD+ YT ++ GL K + EA L K
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 109/224 (48%), Gaps = 42/224 (18%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q +L LL ++E + P+VV Y+++I C SDA + S M + I P+VFTFN
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260
Query: 63 S-----------------------------------LIYGFCIVGLLKEAISLLDEMIMK 87
+ LIYG C+ L EA + M+ K
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 88 NIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKA 141
P+ T++IL++G CK KV M ++GV N VTY L+ GYC G++N A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 142 KDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS-LQK 184
++I M GV P++ Y V+++GLC +++AL +L+ +QK
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 91/162 (56%), Gaps = 6/162 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V + +++ FC+ V DA ++ +M+ PNV +N++I G C + A+ L
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
L+ M I P+ T+N L+ GLC G ++++ M K+ + P+V T+N+L+D
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G V++A++ M + + PD+ Y+++I GLC +DEA
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 14/205 (6%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + ++ + + P++V YS +I C + +A +++ M++K P+V T+
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
+ LI G+C ++ + L EM + + N T+ IL+ G C+ GK + M+
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
GV PN++TYN L+ G C G++ KA IL M ++G+ D+ Y +II G+CK V +
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 176 ALTL---LSLQK-----WTAKTLFL 192
A + L+ Q WT T+ L
Sbjct: 450 AWDIYCSLNCQGLMPDIWTYTTMML 474
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P++ +S ++ + K K L+ +M I N+ T N L+ FC L A+S
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYC 133
L +MI +P+ TF LL+G C+ +V M+ G KPNVV YN+++DG C
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+V+ A D+LN M + G+ PDV Y +I+GLC +A ++S
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 39 VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI 98
+ D+ DL+ M+ R LP++ F+ L+ + I L ++M M I N T NI
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 99 LLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
LL+ C+ ++ L M+K G +P++VT+ SL++G+C V A + + M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLLS 181
P+V Y II+GLCK K VD AL LL+
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLN 210
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ ++L ++ + V+ N V Y+ +I +C+ ++ A +++ M+ + PN+ T+N
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ 116
L++G C G +++A+ +L +M +D + T+NI++ G+CK G+V + Q
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCY 160
G+ P++ TY ++M G G +A + M + G+ P+ +CY
Sbjct: 461 GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN-ECY 503
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L +L ++ + ++V Y+ II CK V+DA+D+Y + + ++P+++T+
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPN 92
+++ G GL +EA +L +M I PN
Sbjct: 470 TTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++ R++ V PN++ Y+ ++ C + + A + ++M + ++ T+
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N +I G C G + +A + + + + P+ +T+ ++ GL K+G + M +
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 116 QGVKPN 121
G+ PN
Sbjct: 495 DGILPN 500
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 97/160 (60%), Gaps = 6/160 (3%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
V Y+T+I +CK+ A +++EML + P+V T+ SLI+ C G + A+ LD+
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 84 MIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
M ++ + PN T+ L+DG ++G +VL M G P+VVTYN+L++G+C+ G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
+ A +L M + G++PDV Y+ +++G C+ VDEAL
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L L K+E K +PNVV Y+T+I +CK + + D F L M K + PN+ ++
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N +I G C G +KE +L EM + + T+N L+ G CKEG + A M++
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G+ P+V+TY SL+ C G +N+A + L+ M G+ P+ + YT +++G + ++E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 176 ALTLL 180
A +L
Sbjct: 399 AYRVL 403
Score = 117 bits (292), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 98/168 (58%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V PNV Y+ +I FC + A L+ +M K LPNV T+N+LI G+C + + +
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
LL M +K ++PN ++N++++GLC+EG+ VL M ++G + VTYN+L+ GY
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C G ++A + M + G+TP V YT +I+ +CK ++ A+ L
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 102/185 (55%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + ++LR++ P+VV Y+ +I C + DA + +M K + P+V ++
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
++++ GFC + EA+ + EM+ K I P+ T++ L+ G C++ + M++
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G+ P+ TY +L++ YC+ G++ KA + N M + GV PDV Y+V+INGL K E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 176 ALTLL 180
A LL
Sbjct: 574 AKRLL 578
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 102/180 (56%), Gaps = 7/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKL-VSDAFDLYSEMLAKRILPNVFTFNSLI 65
+L ++ + MP V+ Y+ ++ + + K +S A +++ EML ++ PNVFT+N LI
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILI 212
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK-----EG-KVLAVMMKQGVK 119
GFC G + A++L D+M K PN T+N L+DG CK +G K+L M +G++
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
PN+++YN +++G C G + + +L M + G + D Y +I G CK +AL +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 105/184 (57%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +++ L ++ + + PN Y+T++ F + +++A+ + EM P+V T+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+LI G C+ G +++AI++L++M K + P+ +++ +L G C+ +V M++
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+KP+ +TY+SL+ G+C +A D+ M + G+ PD YT +IN C +++
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 176 ALTL 179
AL L
Sbjct: 539 ALQL 542
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 115/210 (54%), Gaps = 26/210 (12%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L++ R++ K + P+ + YS++I FC+ + +A DLY EML + P+ FT+ +LI
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK-------VLAVMMKQGVK 119
+C+ G L++A+ L +EM+ K + P+ T+++L++GL K+ + +L + ++ V
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV- 587
Query: 120 PNVVTYN---------------SLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII 164
P+ VTY+ SL+ G+C+ G + +A + SM PD Y ++I
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Query: 165 NGLCKIKMVDEALTLLSLQKWTAKTLFLIQ 194
+G C+ + +A TL K K+ FL+
Sbjct: 648 HGHCRAGDIRKAYTLY---KEMVKSGFLLH 674
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 6/165 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V+ Y+++I S CK ++ A + +M + + PN T+ +L+ GF G + EA +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
L EM P+ T+N L++G C GK VL M ++G+ P+VV+Y++++ G+C
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+V++A + M + G+ PD Y+ +I G C+ + EA L
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 92/172 (53%), Gaps = 10/172 (5%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGL-LKEAISLLDE 83
++ ++ S+ + L+ A + A +P V ++N+++ + A ++ E
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195
Query: 84 MIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
M+ + PN +T+NIL+ G C G + M +G PNVVTYN+L+DGYC + +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLC---KIKMVDEALTLLSLQKWT 186
++ +L SMA G+ P++ Y V+INGLC ++K V LT ++ + ++
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGS---------------FCKDKLVSDAFDLY 46
+TR + +LL K+ + +P+ V Y T+I + FC ++++A ++
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 47 SEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE 106
ML K P+ +N +I+G C G +++A +L EM+ + T L+ L KE
Sbjct: 629 ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKE 688
Query: 107 GKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAK----------------DILNSMAQ 150
GKV + N V + L C + E +AK D+L MA+
Sbjct: 689 GKVNEL--------NSVIVHVLRS--CELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Query: 151 SGVTPD 156
G P+
Sbjct: 739 DGFLPN 744
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 107/180 (59%), Gaps = 6/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++ L +I G PNVV Y+T+I CK++ ++ A +L+++M PNV T+N+L+
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA------VMMKQGVKP 120
G C +G +A LL +M+ + I+PN TF L+D K GK++ VM++ V P
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+V TY SL++G C+ G +++A+ + M ++G P+ YT +I+G CK K V++ + +
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 6/182 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
Q+ +E PN V+Y+T+I FCK K V D ++ EM K ++ N T+ LI G+
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNV 122
C+VG A + ++M + P+ T+N+LLDGLC GKV M K+ + N+
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
VTY ++ G C +G+V A D+ S+ G+ P+V YT +I+G C+ ++ EA +L
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 183 QK 184
K
Sbjct: 494 MK 495
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 98/170 (57%), Gaps = 6/170 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V +++++ +C + DA L+ ++L PNV T+ +LI C L A+ L
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
++M PN T+N L+ GLC+ G+ +L MMK+ ++PNV+T+ +L+D +
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
VG++ +AK++ N M Q V PDV Y +INGLC ++DEA + L +
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P+V Y ++I C L+ +A ++ M PN + +LI+GFC +++ +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
+ EM K + N T+ +L+ G C G+ V M + P++ TYN L+DG
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C G+V KA I M + + ++ YT+II G+CK+ V++A L
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y I+ + + +DA DL++ M+ R LP++ F L+ + ISL ++M
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 86 MKNIDPNAYTFNILLDGLC------KEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ I P T NI++ +C + L MMK G +P++VT+ SL++GYC +
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
A + + + G P+V YT +I LCK + ++ A+ L +
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFN 212
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q +L L ++ +P+++ ++ ++ K L+ +M I P + T N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ 116
+++ C+ A L +M+ +P+ TF LL+G C ++ ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G KPNVVTY +L+ C +N A ++ N M +G P+V Y ++ GLC+I +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 177 LTLL 180
LL
Sbjct: 243 AWLL 246
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L + + + + N+V Y+ II CK V DAFDL+ + +K + PNV T+
Sbjct: 412 GKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITY 471
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTF 96
++I GFC GL+ EA SL +M PN +
Sbjct: 472 TTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + ++ ++ + P++ Y+ ++ C + V A ++ M + + N+ T
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+ +I G C +G +++A L + K + PN T+ ++ G C+ G + M
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 115 KQGVKPNVVTY 125
+ G PN Y
Sbjct: 496 EDGFLPNESVY 506
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G A L++ ++ + P+ Y T+I C+ + +A L++EM+ K P V T+
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL------AVMMK 115
SLI G C + EA+ L+EM K I+PN +T++ L+DGLCK+G+ L +MM
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G +PN+VTY +L+ G C ++ +A ++L+ M G+ PD Y +I+G C I E
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFRE 350
Query: 176 ALTLL 180
A L
Sbjct: 351 AANFL 355
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 7/183 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
SL++ K++ P+ Y T++ ++ ++ AF Y M + P V + N LI
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 67 GFCI-VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVK 119
C G + + + EM + DP++YT+ L+ GLC+ G++ M+++
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
P VVTY SL++G C V++A L M G+ P+V Y+ +++GLCK +A+ L
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 180 LSL 182
+
Sbjct: 285 FEM 287
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G++ +++L + + PN+V Y+T+I CK++ + +A +L M + + P+ +
Sbjct: 276 GRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLY 335
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI-------LLDGLCKEGKVLAV-- 112
+I GFC + +EA + LDEMI+ I PN T+NI ++ GLC A
Sbjct: 336 GKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTL 395
Query: 113 ---MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
M +G+ V T SL+ C GE KA +++ + G P + ++I
Sbjct: 396 YLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLD 455
Query: 170 IKMVDEA 176
+V EA
Sbjct: 456 KTIVGEA 462
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 7/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL-PNVF 59
+G+ +L+LL + G P++V Y+T+I FCK ++ A +++ ++ + + P+V
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------M 113
T+ S+I G+C G ++EA SLLD+M+ I P TFN+L+DG K G++L M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+ G P+VVT+ SL+DGYC VG+V++ + M G+ P+ Y+++IN LC +
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 174 DEALTLL 180
+A LL
Sbjct: 399 LKARELL 405
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 97/178 (54%), Gaps = 10/178 (5%)
Query: 12 RKIEGKLV----MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+I GK++ P+VV ++++I +C+ VS F L+ EM A+ + PN FT++ LI
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
C L +A LL ++ K+I P + +N ++DG CK GKV + M K+ KP+
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+T+ L+ G+C+ G + +A I + M G +PD + +++ L K M EA L
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ R + LL + + P V ++ ++ + K + A ++ +M++ P+V TF
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
SLI G+C VG + + L +EM + + PNA+T++IL++ LC E ++L +
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P YN ++DG+C G+VN+A I+ M + PD +T++I G C + E
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 176 ALTLLS 181
A+++
Sbjct: 471 AVSIFH 476
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+GQ +L ++ + + PN YS +I + C + + A +L ++ +K I+P F
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
+N +I GFC G + EA +++EM K P+ TF IL+ G C +G++ M+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
G P+ +T +SL+ G +A LN +A+ G + +V
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNV 521
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Query: 27 STIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIM 86
++++ + K V DA L+ E L + + TFN LI G C VG ++A+ LL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 87 KNIDPNAYTFNILLDGLCKEGKV-LAVMMKQGVK------PNVVTYNSLMDGYCLVGEVN 139
+P+ T+N L+ G CK ++ A M + VK P+VVTY S++ GYC G++
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+A +L+ M + G+ P + V+++G K
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+ + S CK L A ++ M + + PN L+ F G L A +LL +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 86 MKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVVTYNSLMDGYCLVGEVN 139
++ N LL+ L K +V M ++ + T+N L+ G C VG+
Sbjct: 166 --EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
KA ++L M+ G PD+ Y +I G CK +++A
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKA 260
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 7/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL-PNVF 59
+G+ +L+LL + G P++V Y+T+I FCK ++ A +++ ++ + + P+V
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------M 113
T+ S+I G+C G ++EA SLLD+M+ I P TFN+L+DG K G++L M
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+ G P+VVT+ SL+DGYC VG+V++ + M G+ P+ Y+++IN LC +
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 174 DEALTLL 180
+A LL
Sbjct: 399 LKARELL 405
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 97/178 (54%), Gaps = 10/178 (5%)
Query: 12 RKIEGKLV----MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+I GK++ P+VV ++++I +C+ VS F L+ EM A+ + PN FT++ LI
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
C L +A LL ++ K+I P + +N ++DG CK GKV + M K+ KP+
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+T+ L+ G+C+ G + +A I + M G +PD + +++ L K M EA L
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ R + LL + + P V ++ ++ + K + A ++ +M++ P+V TF
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
SLI G+C VG + + L +EM + + PNA+T++IL++ LC E ++L +
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P YN ++DG+C G+VN+A I+ M + PD +T++I G C + E
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 176 ALTLLS 181
A+++
Sbjct: 471 AVSIFH 476
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+GQ +L ++ + + PN YS +I + C + + A +L ++ +K I+P F
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFM 419
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
+N +I GFC G + EA +++EM K P+ TF IL+ G C +G++ M+
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
G P+ +T +SL+ G +A LN +A+ G + +V
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNV 521
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Query: 27 STIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIM 86
++++ + K V DA L+ E L + + TFN LI G C VG ++A+ LL M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 87 KNIDPNAYTFNILLDGLCKEGKV-LAVMMKQGVK------PNVVTYNSLMDGYCLVGEVN 139
+P+ T+N L+ G CK ++ A M + VK P+VVTY S++ GYC G++
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+A +L+ M + G+ P + V+++G K
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+ + S CK L A ++ M + + PN L+ F G L A +LL +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 86 MKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVVTYNSLMDGYCLVGEVN 139
++ N LL+ L K +V M ++ + T+N L+ G C VG+
Sbjct: 166 --EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
KA ++L M+ G PD+ Y +I G CK +++A
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKA 260
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 7/182 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L LL K+E + +VV+Y+TII CK K + DAFDL+++M K I P+VFT+
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--MMKQGVK 119
N LI C G +A LL +M+ KNI+P+ FN L+D KEGK++ + + VK
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 120 -----PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
P+VV YN+L+ G+C V + ++ M+Q G+ + YT +I+G + + D
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 175 EA 176
A
Sbjct: 409 NA 410
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 96/173 (55%), Gaps = 6/173 (3%)
Query: 14 IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGL 73
++ K P+VV Y+T+I FCK K V + +++ EM + ++ N T+ +LI+GF
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 74 LKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNS 127
A + +M+ + P+ T+NILLDGLC G V M K+ +K ++VTY +
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 128 LMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+++ C G+V D+ S++ GV P+V YT +++G C+ + +EA L
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 95/169 (56%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ N+ YS I FC+ +S A + +M+ P++ T NSL+ GFC + EA+
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
+L+D+M+ P+ TF L+ GL + K ++ M+ +G +P++VTY ++++G
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C GE + A ++LN M + + DV Y II+GLCK K +D+A L +
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 100/187 (53%), Gaps = 10/187 (5%)
Query: 5 RASLQLLRKIEGKLVM----PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
R+ L L I GK++ P++V ++++ FC +S+A L +M+ P+ T
Sbjct: 123 RSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 182
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
F +L++G EA++L++ M++K P+ T+ +++GLCK G+ +L M
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
K ++ +VV YN+++DG C ++ A D+ N M G+ PDV Y +I+ LC
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302
Query: 175 EALTLLS 181
+A LLS
Sbjct: 303 DASRLLS 309
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
Query: 35 KDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAY 94
+D + DA L+ +M+ R P++ F+ L+ + ISL ++M I N Y
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 95 TFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
T++I ++ C+ + +L MMK G P++VT NSL++G+C +++A +++ M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 149 AQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ G PD +T +++GL + EA+ L+
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 204
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V +S ++ + K L +M I N++T++ I FC L A+++
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCL 134
L +M+ P+ T N LL+G C ++ M++ G +P+ VT+ +L+ G
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ ++A ++ M G PD+ Y +INGLCK D AL LL+
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 239
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P+++ Y+ ++ C + V A ++ M + + ++ T+ ++I C G +++
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG-----KVLAVMMKQ-GVKPNVVTYNSLMDGY 132
L + +K + PN T+ ++ G C++G L V MK+ G PN TYN+L+
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRAR 541
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G+ + +++ M G D + ++ N L ++ L +LS
Sbjct: 542 LRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDMLS 590
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L + ++ + + ++V Y+T+I + CK V D +DL+ + K + PNV T+
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA 111
+++ GFC GL +EA +L EM PN+ T+N L+ ++G A
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 108/185 (58%), Gaps = 6/185 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G A+ + ++ K + P VV Y++++G +C ++ A LY EM K I P+++T
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
F +L+ G GL+++A+ L +EM N+ PN T+N++++G C+EG + L M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
++G+ P+ +Y L+ G CL G+ ++AK ++ + + + CYT +++G C+ ++
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 175 EALTL 179
EAL++
Sbjct: 630 EALSV 634
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 6/161 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+V Y+++I CK +S A +EM+ K++ P V T+ SL+ G+C G + +A+ L
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLV 135
EM K I P+ YTF LL GL + G K+ M + VKPN VTYN +++GYC
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G+++KA + L M + G+ PD Y +I+GLC EA
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 109/194 (56%), Gaps = 7/194 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L L++++ V PN+ +Y+ +I S CK + +A L+ M + PN T+
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
+ LI FC G L A+S L EM+ + + Y +N L++G CK G + +A M+
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ ++P VVTY SLM GYC G++NKA + + M G+ P + +T +++GL + ++ +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 176 ALTLLS-LQKWTAK 188
A+ L + + +W K
Sbjct: 526 AVKLFNEMAEWNVK 539
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 41/221 (18%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G R +++L ++ V PN V Y+ +I +C++ +S AF+ EM K I+P+ +++
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------------ 109
LI+G C+ G EA +D + N + N + LL G C+EGK+
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 110 -----------------------------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
L M +G+KP+ V Y S++D G+ +
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
A I + M G P+ YT +INGLCK V+EA L S
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 6/171 (3%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
+ + GK + P+VV Y T++ CK + ++ EML R P+ +SL+ G
Sbjct: 286 KDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKR 345
Query: 72 GLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTY 125
G ++EA++L+ ++ + PN + +N L+D LCK K + M K G++PN VTY
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 126 NSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ L+D +C G+++ A L M +G+ V Y +ING CK + A
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 91/165 (55%), Gaps = 6/165 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N+V Y+ +I CK + V +A + ++ K + P+V T+ +L+YG C V + + ++
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVVTYNSLMDGYCLV 135
DEM+ P+ + L++GL K GK+ + + GV PN+ YN+L+D C
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ ++A+ + + M + G+ P+ Y+++I+ C+ +D AL+ L
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 13/187 (6%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
LL+++ + + P+ V+Y+++I + K +AF ++ M+ + +PN T+ ++I G C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-------LAVMMKQGVKPNV 122
G + EA L +M + PN T+ LD L K G+V L + +G+ N
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANT 787
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
TYN L+ G+C G + +A +++ M GV+PD YT +IN LC+ V +A+ L
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL--- 844
Query: 183 QKWTAKT 189
W + T
Sbjct: 845 --WNSMT 849
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 81/144 (56%), Gaps = 8/144 (5%)
Query: 20 MPNVVMYSTIIGSFCKDKL-VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+PN V Y + K ++ + A +L++ +L K +L N T+N LI GFC G ++EA
Sbjct: 749 VPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
L+ MI + P+ T+ +++ LC+ V M ++G++P+ V YN+L+ G
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 133 CLVGEVNKAKDILNSMAQSGVTPD 156
C+ GE+ KA ++ N M + G+ P+
Sbjct: 868 CVAGEMGKATELRNEMLRQGLIPN 891
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
++P V S ++ K + A +L+++M++ I P+V+ + +I C + L A
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL-AVMMK-----QGVKPNVVTYNSLMDGY 132
++ M D N +N+L+DGLCK+ KV AV +K + +KP+VVTY +L+ G
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C V E ++++ M +P + ++ GL K ++EAL L+
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV 355
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P+V +Y+ +I S C+ K +S A ++ + M A N+ +N LI G C + EA+
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCK--EGKVLAVMMKQ----GVKPNVVTYNSLMDGY 132
+ ++ K++ P+ T+ L+ GLCK E ++ MM + P+ +SL++G
Sbjct: 283 GIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGL 342
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G++ +A +++ + GV+P++ Y +I+ LCK + EA
Sbjct: 343 RKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L+ ++ G V P+ + Y+T+I C+ V A +L++ M K I P+ +
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYT 95
N+LI+G C+ G + +A L +EM+ + + PN T
Sbjct: 861 NTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 123 bits (308), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 106/185 (57%), Gaps = 6/185 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + +L ++ + PN V ++ +I +FCK+ + +A +++ EM K P+V+T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
FNSLI G C V +K A+ LL +MI + + N T+N L++ + G K++ M+
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
QG + +TYNSL+ G C GEV+KA+ + M + G P ++INGLC+ MV+
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 175 EALTL 179
EA+
Sbjct: 617 EAVEF 621
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 6/181 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L++L + K PNV Y+ ++ FCK + +A+++ +EM A + PN FN LI
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKP 120
FC + EA+ + EM K P+ YTFN L+ GLC+ ++ L M+ +GV
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
N VTYN+L++ + GE+ +A+ ++N M G D Y +I GLC+ VD+A +L
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 181 S 181
Sbjct: 588 E 588
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 38/214 (17%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
++L LLR + +PN V+Y T+I S K V++A L EM +P+ TFN +I
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 294
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA-------------- 111
G C + EA +++ M+++ P+ T+ L++GLCK G+V A
Sbjct: 295 LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV 354
Query: 112 ------------------------VMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNS 147
++ G+ P+V TYNSL+ GY G V A ++L+
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 148 MAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
M G P+V YT++++G CK+ +DEA +L+
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
++P+V Y+++I + K+ LV A ++ +M K PNV+++ L+ GFC +G + EA
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
++L+EM + PN FN L+ CKE + + M ++G KP+V T+NSL+ G
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C V E+ A +L M GV + Y +IN + + EA L++
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 100/184 (54%), Gaps = 6/184 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ + +L LLR + + V+ N V Y+T+I +F + + +A L +EM+ + + T+N
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQ 116
SLI G C G + +A SL ++M+ P+ + NIL++GLC+ G V M+ +
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G P++VT+NSL++G C G + + + G+ PD + +++ LCK V +A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 177 LTLL 180
LL
Sbjct: 689 CLLL 692
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 94/181 (51%), Gaps = 10/181 (5%)
Query: 5 RASLQLLRKIEGKLVMP----NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
R ++ RK+ ++V + + Y+++I C+ V A L+ +ML P+ +
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
N LI G C G+++EA+ EM+++ P+ TFN L++GLC+ G++ +
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+G+ P+ VT+N+LM C G V A +L+ + G P+ + +++++ + + +D
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Query: 175 E 175
Sbjct: 722 R 722
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
+ + P + + ++ +FC + A L +M +PN + +LI+ + E
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAVMMKQGVKPNVVTYNSLMD 130
A+ LL+EM + P+A TFN ++ GLCK K++ M+ +G P+ +TY LM+
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G C +G V+ AKD+ + + P++ + +I+G +D+A +LS
Sbjct: 331 GLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLS 377
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 42 AFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD 101
A +++ +ML+++I P +FTF ++ FC V + A+SLL +M PN+ + L+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 102 GLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTP 155
L K +V L M G P+ T+N ++ G C +N+A ++N M G P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 156 DVQCYTVIINGLCKIKMVDEALTLL 180
D Y ++NGLCKI VD A L
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLF 345
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 112/185 (60%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+T+ + Q+ ++ + V N+V Y+T+IG C++ +++A + +M + I PN+ T+
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+LI GFC VG L +A+SL ++ + + P+ T+NIL+ G C++G K++ M +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+KP+ VTY L+D + + KA + SM + G+ PDV Y+V+I+G C ++E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 176 ALTLL 180
A L
Sbjct: 462 ASRLF 466
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 108/190 (56%), Gaps = 7/190 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + ++ K++ V PN+ Y+ ++ CKD DAF ++ EM + + N+ T+
Sbjct: 247 GVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTY 306
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC---KEGKVLAV---MMK 115
N+LI G C L EA ++D+M I+PN T+N L+DG C K GK L++ +
Sbjct: 307 NTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ P++VTYN L+ G+C G+ + A ++ M + G+ P YT++I+ + +++
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Query: 176 ALTL-LSLQK 184
A+ L LS+++
Sbjct: 427 AIQLRLSMEE 436
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ S LL ++ PNVV+Y+T+I CK + A DL+ EM ++ N T+
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
LI G G+ K+ + ++M + PN YT+N +++ LCK+G+ V M +
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+GV N+VTYN+L+ G C ++N+A +++ M G+ P++ Y +I+G C + + +
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 176 ALTL 179
AL+L
Sbjct: 357 ALSL 360
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G T + ++++++E + + P+ V Y+ +I +F + + A L M ++P+V T+
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+ LI+GFCI G + EA L M+ KN +PN +N ++ G CKEG K+L M +
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVI 163
+ + PNV +Y +++ C + +A+ ++ M SG+ P ++I
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 97/186 (52%), Gaps = 6/186 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ +L L R ++ + + P++V Y+ ++ FC+ S A + EM + I P+ T
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+ LI F +++AI L M + P+ +T+++L+ G C +G ++ M+
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
++ +PN V YN+++ GYC G +A +L M + + P+V Y +I LCK +
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530
Query: 175 EALTLL 180
EA L+
Sbjct: 531 EAERLV 536
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V+ +V + +I C+ + +FDL E+ PNV + +LI G C G +++A
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
L EM + N T+ +L++GL K G ++ M + GV PN+ TYN +M+
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
C G A + + M + GV+ ++ Y +I GLC+ ++EA
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEA 322
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
+Y II S+ + + ++ + ++EM+ +P FN L+ + S +E
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 85 IMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
K + + Y+F IL+ G C+ G++ L + + G PNVV Y +L+DG C GE+
Sbjct: 156 KSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
KAKD+ M + G+ + + YTV+INGL K
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 77 AISLLDEMIMKNIDPNAYTFNILLD---GLCKEGKVLAVMM--KQGVKPNVVTYNSLMDG 131
+IS +EM+ P + FN LL G + + K V +V ++ L+ G
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKG 172
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C GE+ K+ D+L + + G +P+V YT +I+G CK +++A L
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVG---L 73
+ + PNV ++ +I + CK ++ A D+ +M PNV ++N+LI G+C +G
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK 276
Query: 74 LKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNS 127
+ +A ++L EM+ ++ PN TFNIL+DG K+ KV M+ Q VKPNV++YNS
Sbjct: 277 MYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 128 LMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
L++G C G++++A + + M +GV P++ Y +ING CK M+ EAL +
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V PN+ ++ +I F KD + + ++ EML + + PNV ++NSLI G C G + EAI
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
S+ D+M+ + PN T+N L++G CK + + QG P YN L+D Y
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTAKTL 190
C +G+++ + M + G+ PDV Y +I GLC+ ++ A L + T+K L
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL--FDQLTSKGL 467
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 98/174 (56%), Gaps = 7/174 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++ + K+ V PN++ Y+ +I FCK+ ++ +A D++ + + +P +
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N LI +C +G + + +L +EM + I P+ T+N L+ GLC+ G + A +
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+G+ P++VT++ LM+GYC GE KA +L M++ G+ P Y +++ G CK
Sbjct: 465 KGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 100/181 (55%), Gaps = 7/181 (3%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
S+++ +++ + V PNV+ Y+++I C +S+A + +M++ + PN+ T+N+LI
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVK 119
GFC +LKEA+ + + + P +N+L+D CK GK+ M ++G+
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
P+V TYN L+ G C G + AK + + + G+ PD+ + +++ G C+ +A L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 180 L 180
L
Sbjct: 493 L 493
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 13/184 (7%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ L ++E + ++P+V Y+ +I C++ + A L+ ++ +K LP++ T
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVT 472
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM------- 113
F+ L+ G+C G ++A LL EM + P T+NI++ G CKEG + A
Sbjct: 473 FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQME 532
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
++ ++ NV +YN L+ GY G++ A +LN M + G+ P+ Y ++ K +MV
Sbjct: 533 KERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV-----KEEMV 587
Query: 174 DEAL 177
D+
Sbjct: 588 DQGF 591
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILP-NVFT 60
G++R + LL+++ + P + Y+ ++ +CK+ + A ++ ++M +R L NV +
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS 543
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV 109
+N L+ G+ G L++A LL+EM+ K + PN T+ I+ + + +G V
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 106/184 (57%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G R + L ++I ++PNVV++ T++ FCK + + A L+ M+ + PN++ +
Sbjct: 283 GNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVY 342
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N LI+G C G + EA+ LL EM N+ P+ +T+ IL++GLC E +V M
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P+ TYNSL+ GYC + +A D+ + M SGV P++ ++ +I+G C ++ +
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462
Query: 176 ALTL 179
A+ L
Sbjct: 463 AMGL 466
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 106/189 (56%), Gaps = 8/189 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+LL ++ + PNV +Y+ I C+D + +A ++ M +LPN++T++++I G+
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNV 122
C G +++A L E+++ + PN F L+DG CK +++ M+K GV PN+
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
YN L+ G+C G + +A +L+ M ++PDV YT++INGLC V EA L
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL--F 397
Query: 183 QKWTAKTLF 191
QK + +F
Sbjct: 398 QKMKNERIF 406
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 9/187 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
M + +L++K V+PN+ YS +I +CK V A+ LY E+L +LPNV
Sbjct: 250 MEEAEKMFELMKK---HGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
F +L+ GFC L A SL M+ +DPN Y +N L+ G CK G +L M
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ P+V TY L++G C+ +V +A + M + P Y +I+G CK ++
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 175 EALTLLS 181
+AL L S
Sbjct: 427 QALDLCS 433
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q + +L +K++ + + P+ Y+++I +CK+ + A DL SEM A + PN+ TF+
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQ 116
+LI G+C V +K A+ L EM +K I P+ T+ L+D KE ++ + M++
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
G+ PN T+ L+DG+ G ++ A D Q + +T +I GLC+
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQ 561
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 6/179 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L L ++ V PN++ +ST+I +C + + A LY EM K I+P+V T+ +LI
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID 487
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKP 120
+KEA+ L +M+ I PN +TF L+DG KEG++ + +Q
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
N V + L++G C G + +A + M G+TPD+ Y ++ G + K + + + L
Sbjct: 548 NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMML 606
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
++P+V +Y + K L S L EM + I PNV+ + I C ++EA
Sbjct: 195 LVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAE 254
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
+ + M + PN YT++ ++DG CK G V ++ + PNVV + +L+DG+
Sbjct: 255 KMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGF 314
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C E+ A+ + M + GV P++ Y +I+G CK + EA+ LLS
Sbjct: 315 CKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 6/159 (3%)
Query: 28 TIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMK 87
+I+ + + + Y M+++ ++P+V + L GL + LLDEM
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 88 NIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKA 141
I PN Y + I + LC++ K+ +M K GV PN+ TY++++DGYC G V +A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 142 KDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ + + + P+V + +++G CK + + A +L
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLF 327
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 6/159 (3%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
+A++ L ++ K ++P+VV Y+ +I + K+ + +A LYS+ML I PN TF L
Sbjct: 461 KAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACL 520
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGV 118
+ GF G L AI E + N F L++GLC+ G +L M G+
Sbjct: 521 VDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
P++ +Y S++ G+ + + M ++G+ P++
Sbjct: 581 TPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL 619
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
F+ LI F +GL +EA+ + EM P++ +L+GL + + +V M+
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLMI 191
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+G+ P+V Y L G +K + +L+ M G+ P+V YT+ I LC+ ++
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKME 251
Query: 175 EALTLLSLQK 184
EA + L K
Sbjct: 252 EAEKMFELMK 261
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++++L ++ + P+V+ Y+ +I + C+D V A L EM + P+V T+
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N L+ G C G L EAI L++M PN T NI+L +C G K+LA M++
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G P+VVT+N L++ C G + +A DIL M Q G P+ Y +++G CK K +D
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 176 ALTLL 180
A+ L
Sbjct: 398 AIEYL 402
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 104/181 (57%), Gaps = 6/181 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+++ L ++ + P++V Y+T++ + CKD V DA ++ +++ +K P + T+N++I
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKP 120
G G +AI LLDEM K++ P+ T++ L+ GL +EGKV + G++P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
N VT+NS+M G C + ++A D L M G P+ YT++I GL M EAL LL
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 181 S 181
+
Sbjct: 578 N 578
Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 107/187 (57%), Gaps = 9/187 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+TR + ++L +EG +P+V+ Y+ +I +CK +++A + M + P+V T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVT 206
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+N+++ C G LK+A+ +LD M+ ++ P+ T+ IL++ C++ K+L M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+G P+VVTYN L++G C G +++A LN M SG P+V + +I+ +C
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 175 EALTLLS 181
+A LL+
Sbjct: 327 DAEKLLA 333
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 100/185 (54%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +++ L + PNV+ ++ I+ S C DA L ++ML K P+V TF
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
N LI C GLL AI +L++M PN+ ++N LL G CKE K+ L M+
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G P++VTYN+++ C G+V A +ILN ++ G +P + Y +I+GL K +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 176 ALTLL 180
A+ LL
Sbjct: 468 AIKLL 472
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 100/181 (55%), Gaps = 6/181 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+++LL ++ + P+VV Y+ ++ CK+ + +A ++M + PNV T N ++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
C G +A LL +M+ K P+ TFNIL++ LC++G +L M + G +P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
N ++YN L+ G+C ++++A + L M G PD+ Y ++ LCK V++A+ +L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 181 S 181
+
Sbjct: 438 N 438
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L +L ++ V P+VV Y+TI+ S C + A ++ ML + P+V T+
Sbjct: 186 GEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
LI C + A+ LLDEM + P+ T+N+L++G+CKEG K L M
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G +PNV+T+N ++ C G A+ +L M + G +P V + ++IN LC+ ++
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 176 ALTLL 180
A+ +L
Sbjct: 363 AIDIL 367
Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 9/168 (5%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P+++ +T+I FC+ A + + +P+V T+N +I G+C G + A+S
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYC 133
+LD M ++ P+ T+N +L LC GK VL M+++ P+V+TY L++ C
Sbjct: 194 VLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
V A +L+ M G TPDV Y V++NG+CK +DEA+ L+
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Query: 39 VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI 98
+ + F M+ +P++ +LI GFC +G ++A +L+ + P+ T+N+
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 99 LLDGLCKEGKV---LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTP 155
++ G CK G++ L+V+ + V P+VVTYN+++ C G++ +A ++L+ M Q P
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 156 DVQCYTVIINGLCKIKMVDEALTLL 180
DV YT++I C+ V A+ LL
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLL 262
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++++L ++ K P ++ Y+T+I K A L EM AK + P+ T+
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
+SL+ G G + EAI E I PNA TFN ++ GLCK + L M+
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
+G KPN +Y L++G G +A ++LN + G+
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 40 SDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNIL 99
S+ YS + + L +V + N L G L+E L+ M+ P+ L
Sbjct: 85 SNGNGHYSSVNSSFALEDVESNNHL-RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTL 143
Query: 100 LDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
+ G C+ G K+L ++ G P+V+TYN ++ GYC GE+N A +L+ M+ V
Sbjct: 144 IRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---V 200
Query: 154 TPDVQCYTVIINGLCKIKMVDEALTLL 180
+PDV Y I+ LC + +A+ +L
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVL 227
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 106/189 (56%), Gaps = 6/189 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+T +L L + GK + PNV++Y+T+I ++ +A L +EM K ++P V TF
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N L+ G C +G + +A L+ MI K P+ +TFNIL+ G + K +L VM+
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
GV P+V TYNSL++G C + + +M + G P++ + +++ LC+ + +DE
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 176 ALTLLSLQK 184
AL LL K
Sbjct: 550 ALGLLEEMK 558
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 103/180 (57%), Gaps = 6/180 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ A+L+LL + + NVV Y T++G F ++ ++ ++L+ +MLA + + TFN
Sbjct: 161 RPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFN 220
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQ 116
L+ C G +KE LLD++I + + PN +T+N+ + GLC+ G +++ +++Q
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G KP+V+TYN+L+ G C + +A+ L M G+ PD Y +I G CK MV A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 102/185 (55%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + QL ++ K ++P V ++ ++ CK VSDA L M++K P++FTF
Sbjct: 405 GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N LI+G+ ++ A+ +LD M+ +DP+ YT+N LL+GLCK K V M++
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G PN+ T+N L++ C ++++A +L M V PD + +I+G CK +D
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584
Query: 176 ALTLL 180
A TL
Sbjct: 585 AYTLF 589
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 12/196 (6%)
Query: 8 LQLLRKIEGKLV----MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNS 63
+QL +I G V +P+ Y ++I C + + A L++E L K I PNV +N+
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 64 LIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQG 117
LI G G++ EA L +EM K + P TFNIL++GLCK G V + VM+ +G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
P++ T+N L+ GY ++ A +IL+ M +GV PDV Y ++NGLCK ++ +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 178 TLLS--LQKWTAKTLF 191
++K A LF
Sbjct: 517 ETYKTMVEKGCAPNLF 532
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +LL K+ + V+PN+ Y+ I C+ + A + ++ + P+V T+
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+LIYG C +EA L +M+ + ++P++YT+N L+ G CK G +++ +
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G P+ TY SL+DG C GE N+A + N G+ P+V Y +I GL M+ E
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 176 ALTL 179
A L
Sbjct: 410 AAQL 413
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 98/190 (51%), Gaps = 13/190 (6%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEM-LAKRILPNVFTFNSLI 65
+L LL +++ K V P+ V + T+I FCK+ + A+ L+ +M A ++ + T+N +I
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVK 119
+ F + A L EM+ + + P+ YT+ +++DG CK G K L MM+ G
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI 669
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
P++ T +++ C+ V +A I++ M Q G+ P+ +N +C + + A
Sbjct: 670 PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAAPK 723
Query: 180 LSLQKWTAKT 189
L L+ K+
Sbjct: 724 LVLEDLLKKS 733
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 13 KIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVG 72
++ + + P+V ++ + SFCK A L + M ++ NV + +++ GF
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
Query: 73 LLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYN 126
E L +M+ + TFN LL LCK+G K+L ++K+GV PN+ TYN
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255
Query: 127 SLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ G C GE++ A ++ + + G PDV Y +I GLCK EA L
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLG 310
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 120 bits (300), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 105/170 (61%), Gaps = 8/170 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P + Y+T+I FCK + +A +++ M+ + + PNV+T+ LI G C VG KEA+ L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
L+ MI K+ +PNA T+NI+++ LCK+G +++ +M K+ +P+ +TYN L+ G C
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 135 VGEVNKAKDILNSMAQ--SGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
G++++A +L M + S PDV Y +I+GLCK + +AL + L
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 101/184 (54%), Gaps = 6/184 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L+L +++G ++V + +I +FCK + +A EM + ++ + SLI
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKP 120
GFC G L +L DE++ + P A T+N L+ G CK G+ + M+++GV+P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
NV TY L+DG C VG+ +A +LN M + P+ Y +IIN LCK +V +A+ ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 181 SLQK 184
L K
Sbjct: 376 ELMK 379
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 102/182 (56%), Gaps = 6/182 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++ LLR++ +MP+V Y+T+I FC+ K + A +L +EM ++ T+ LI
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVL-AVMMKQGVKP 120
FC G + EA+ L EM ++ + + L+ G C GK L ++++G P
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+TYN+L+ G+C +G++ +A +I M + GV P+V YT +I+GLC + EAL LL
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 181 SL 182
+L
Sbjct: 341 NL 342
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 97/171 (56%), Gaps = 11/171 (6%)
Query: 16 GKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLK 75
G V N+++ ST+ K V+ A +L+ ++ +I+ N T+ ++I GFC G+L
Sbjct: 457 GDRVTTNILLNSTL-----KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLN 511
Query: 76 EAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLM 129
A LL +M + + P+ + +N LL LCKEG ++ M + P+VV++N ++
Sbjct: 512 VAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMI 571
Query: 130 DGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
DG G++ A+ +L M+++G++PD+ Y+ +IN K+ +DEA++
Sbjct: 572 DGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 7/169 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +++L ++I ++ N Y+ +I FCK +++ A L +M + P+VF +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
N L+ C G L +A L +EM N P+ +FNI++DG K G + L M +
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ-CYTVI 163
G+ P++ TY+ L++ + +G +++A + M SG PD C +V+
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 42 AFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE--AISLLDEMIMKNIDPNAYTFNIL 99
AF Y +ML N + + L+ C V + K A +L M+ + N Y NIL
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLE--CYVQMRKTGFAFGVLALMLKRGFAFNVYNHNIL 148
Query: 100 LDGLCKE---GKVLAV---MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
L GLC+ GK +++ M + + P+V +YN+++ G+C E+ KA ++ N M SG
Sbjct: 149 LKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 154 TPDVQCYTVIINGLCKIKMVDEALTLLSLQKW 185
+ + + ++I+ CK +DEA+ L K+
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF 240
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N V S ++ + + + AF + + ML + NV+ N L+ G C +A+SLL
Sbjct: 106 NFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLL 165
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKVLA-------VMMKQGVKPNVVTYNSLMDGYCL 134
EM ++ P+ +++N ++ G C EGK L M G ++VT+ L+D +C
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFC-EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCK 224
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G++++A L M G+ D+ YT +I G C +D L
Sbjct: 225 AGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L +++ P+VV ++ +I K + A L M + P++FT+
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV--LAVMMKQGVK 119
+ LI F +G L EAIS D+M+ +P+A+ + +L +G+ L ++K+ V
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 120 PNVV 123
++V
Sbjct: 663 KDIV 666
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 107/189 (56%), Gaps = 6/189 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + R + + ++ + Y+ ++ K+ V DA +++ EM K I P+VF++
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
LI GF +G +++A S+ DEM+ + + PN +N+LL G C+ G++ L M
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ PN VTY +++DGYC G++ +A + + M G+ PD YT +++G C++ V+
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 176 ALTLLSLQK 184
A+T+ K
Sbjct: 751 AITIFGTNK 759
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V+PN V+ + +I +CK V +A Y M+ + IL + T+ L+ G + +A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
+ EM K I P+ +++ +L++G K G + M+++G+ PNV+ YN L+ G+
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
C GE+ KAK++L+ M+ G+ P+ Y II+G CK + EA L K
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +++++ PNVV+Y+T+I +F ++ DA + EM + I P++F +
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG------LCKEGKVLAVMMK 115
NSLI G + EA S L EM+ + PNA+T+ + G K + M +
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
GV PN V L++ YC G+V +A SM G+ D + YTV++NGL K VD+
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 176 A 176
A
Sbjct: 611 A 611
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 7/168 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++ R++ GK + P+V Y +I F K + A ++ EM+ + + PNV +N L+ GF
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNV 122
C G +++A LLDEM +K + PNA T+ ++DG CK G ++ M +G+ P+
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
Y +L+DG C + +V +A I + + G + +IN + K
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKF 779
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 44/223 (19%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +LL ++ K + PN V Y TII +CK +++AF L+ EM K ++P+ F +
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 62 NSLIYGFCIVGLLKEAISL----------------------------------LDEMIMK 87
+L+ G C + ++ AI++ L+ ++
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795
Query: 88 NID----PNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGE 137
+ D PN T+NI++D LCKEG + A M + P V+TY SL++GY +G
Sbjct: 796 SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ + + +G+ PD Y+VIIN K M +AL L+
Sbjct: 856 RAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 44/194 (22%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PNV++Y+ ++G FC+ + A +L EM K + PN T+ ++I G+C G L EA L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCK----------------------------------- 105
DEM +K + P+++ + L+DG C+
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKF 779
Query: 106 -----EGKVLAVMMKQGV----KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD 156
+ +VL +M KPN VTYN ++D C G + AK++ + M + + P
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPT 839
Query: 157 VQCYTVIINGLCKI 170
V YT ++NG K+
Sbjct: 840 VITYTSLLNGYDKM 853
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
MY I K+ ++ A L+ M+A ++P + SLI G+C +++ LL EM
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 85 IMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+NI + YT+ ++ G+C G ++ M+ G +PNVV Y +L+ +
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
A +L M + G+ PD+ CY +I GL K K +DEA + L
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
R +LL +++ + ++ + Y T++ C + A+++ EM+A PNV + +L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGV 118
I F +A+ +L EM + I P+ + +N L+ GL K ++ L M++ G+
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
KPN TY + + GY E A + M + GV P+ T +IN CK V EA +
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
++P Y+++I +C++K V ++L EM + I+ + +T+ +++ G C G L A
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
+++ EMI PN + L+ + +VL M +QG+ P++ YNSL+ G
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
+++A+ L M ++G+ P+ Y I+G
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 15/183 (8%)
Query: 1 MGQTRASLQLL-RKIEG---KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILP 56
G+T ++L R ++G + PN V Y+ +I CK+ + A +L+ +M ++P
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMP 838
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG---KVLAVM 113
V T+ SL+ G+ +G E + DE I I+P+ ++++++ KEG K L ++
Sbjct: 839 TVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898
Query: 114 --------MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
+ G K ++ T +L+ G+ VGE+ A+ ++ +M + PD +IN
Sbjct: 899 DQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Query: 166 GLC 168
C
Sbjct: 959 ESC 961
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 39 VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI 98
V A L M+ K ++P +T++ LI G C + L++A SLL EM + + +T+++
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 99 LLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
L+DGL K A M+ G+ Y+ + G + KAK + + M SG
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ P Q Y +I G C+ K V + LL
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELL 405
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
YS +I K + A L EM++ I + ++ I G++++A +L D MI
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 86 MKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ P A + L++G C+E V L M K+ + + TY +++ G C G+++
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
A +I+ M SG P+V YT +I + +A+ +L K
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 27/147 (18%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
F L G+ G ++EA+ + + + P +LLD L + + V M+
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDIL---------------------NSMAQSGV 153
++ V +V TY+ L+ +C G V KD+L SM G+
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGL 273
Query: 154 TPDVQCYTVIINGLCKIKMVDEALTLL 180
P Y V+I+GLCKIK +++A +LL
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLL 300
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 108/190 (56%), Gaps = 6/190 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G+ L+ R+++G + PNVV YST++ +FCK+ ++ A Y +M ++PN +T
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVL-AVMM 114
+ SLI C +G L +A L +EM+ ++ N T+ L+DGLC KE + L M
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
GV PN+ +YN+L+ G+ +++A ++LN + G+ PD+ Y I GLC ++ ++
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 175 EALTLLSLQK 184
A +++ K
Sbjct: 525 AAKVVMNEMK 534
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V+ Y+ +I FCK + + Y EM + PNV ++++L+ FC G++++AI
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCL 134
+M + PN YT+ L+D CK G + M++ GV+ NVVTY +L+DG C
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ +A+++ M +GV P++ Y +I+G K K +D AL LL+
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+T + + + G P V Y+ +I CK+ V A L+ EM + ++P+ T
Sbjct: 240 LGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVT 299
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
+NS+I GF VG L + + +EM +P+ T+N L++ CK GK+ M
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK 359
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G+KPNVV+Y++L+D +C G + +A M + G+ P+ YT +I+ CKI +
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 175 EALTL 179
+A L
Sbjct: 420 DAFRL 424
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G ++Q K++ V P + ++ F K D + +M+ P VFT
Sbjct: 205 LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFT 264
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
+N +I C G ++ A L +EM + + P+ T+N ++DG K G++ M
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+P+V+TYN+L++ +C G++ + M +G+ P+V Y+ +++ CK M+
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 175 EALTL 179
+A+
Sbjct: 385 QAIKF 389
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ + + +L K++ V+PN+ Y+ +I F K K + A +L +E+ + I P++ +
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQ 116
+ I+G C + ++ A +++EM I N+ + L+D K G +L M +
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQS-GVTPDVQCYTVIINGLCKIKMVDE 175
++ VVT+ L+DG C V+KA D N ++ G+ + +T +I+GLCK V+
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 176 ALTLLS 181
A TL
Sbjct: 632 ATTLFE 637
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 7/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L+LL +++G+ + P++++Y T I C + + A + +EM I N + +L+
Sbjct: 491 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 550
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA-------VMMKQGVK 119
+ G E + LLDEM +I+ TF +L+DGLCK V + G++
Sbjct: 551 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
N + +++DG C +V A + M Q G+ PD YT +++G K V EAL L
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 670
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 9/188 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL-PNVFT 60
G L LL +++ + VV + +I CK+KLVS A D ++ + L N
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
F ++I G C ++ A +L ++M+ K + P+ + L+DG K+G VL M
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD-VQCYTVIINGLCKIKMV 173
+ G+K +++ Y SL+ G ++ KA+ L M G+ PD V C +V+ ++ +
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY-ELGCI 734
Query: 174 DEALTLLS 181
DEA+ L S
Sbjct: 735 DEAVELQS 742
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 44 DLYSEMLAKR--ILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD 101
D++ + + R +P F++L +G+L+EAI +M + P + N LL
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 102 GLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTP 155
K GK V M+ G +P V TYN ++D C G+V A+ + M G+ P
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 156 DVQCYTVIINGLCKIKMVDEALTLLSLQK 184
D Y +I+G K+ +D+ + K
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 107/189 (56%), Gaps = 9/189 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++ L RK+ K PN+V+YS ++ C++ ++A ++ + M+A LPN +T+
Sbjct: 376 GKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY 435
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQ----- 116
+SL+ GF GL +EA+ + EM N + +++L+DGLC G+V MM
Sbjct: 436 SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Query: 117 -GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM---AQSGVTPDVQCYTVIINGLCKIKM 172
G+KP+ V Y+S++ G C +G ++ A + + M + PDV Y ++++GLC K
Sbjct: 496 IGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD 555
Query: 173 VDEALTLLS 181
+ A+ LL+
Sbjct: 556 ISRAVDLLN 564
Score = 113 bits (282), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 98/169 (57%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ PN + ++ +I + CK + V A +++ M ++ LP+ +T+ +L+ G C + EA+
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
LLDEM + P+ +N+L+DGLCK+G + V M +G PN VTYN+L+ G
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
CL G+++KA +L M S P+ Y +INGL K + +A+ LLS
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++ LL ++ +PN V Y T+I K + +DA L S M + N +
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
+ LI G G +EA+SL +M K PN +++L+DGLC+EGK +L M+
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G PN TY+SLM G+ G +A + M ++G + + CY+V+I+GLC + V E
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 176 ALTLLS 181
A+ + S
Sbjct: 486 AMMVWS 491
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 41/211 (19%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
LL +++ + P+ V+Y+ +I CK ++ L M K +PN T+N+LI+G C
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYT---------------------------------- 95
+ G L +A+SLL+ M+ PN T
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363
Query: 96 -FNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
+++L+ GL KEGK M ++G KPN+V Y+ L+DG C G+ N+AK+ILN M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 149 AQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
SG P+ Y+ ++ G K + +EA+ +
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 6/179 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++++ R + + +P+ Y T++ CK++ + +A L EM ++ P+ +N LI
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKP 120
G C G L L+D M +K PN T+N L+ GLC +GK +L M+ P
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
N VTY +L++G A +L+SM + G + Y+V+I+GL K +EA++L
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 35/192 (18%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK---RILPN 57
+G+ + ++ + K+ + P+ V YS+II C + A LY EML + + P+
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 58 VFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL------CKEGK--- 108
V T+N L+ G C+ + A+ LL+ M+ + DP+ T N L+ L C +G+
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFL 599
Query: 109 ---VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
V+ ++ +Q V G C + EV M + P + +I+
Sbjct: 600 EELVVRLLKRQRV-----------SGACTIVEV---------MLGKYLAPKTSTWAMIVR 639
Query: 166 GLCKIKMVDEAL 177
+CK K ++ A+
Sbjct: 640 EICKPKKINAAI 651
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 26/153 (16%)
Query: 29 IIGSFCKDKLVSDAFDLYSEMLAK-RILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMK 87
+ ++ K L A DL+ M+ + R +V +FNS++ GL + D ++
Sbjct: 118 VFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS 177
Query: 88 NIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNS 147
N++ N + PN +++N ++ C + V++A ++
Sbjct: 178 NMNMN-------------------------ISPNGLSFNLVIKALCKLRFVDRAIEVFRG 212
Query: 148 MAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
M + PD Y +++GLCK + +DEA+ LL
Sbjct: 213 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 101/182 (55%), Gaps = 6/182 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++LR + + + P+VV ++ +I F K + +A +LY EM+ + PN T+
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK-----EG-KVLAVMMK 115
NS+I G C+ G L +A D M K PN T+N L+ G CK EG K+ M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G ++ TYN+L+ GYC VG++ A DI M VTPD+ + ++++GLC ++
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 176 AL 177
AL
Sbjct: 405 AL 406
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 101/185 (54%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L+LL ++E K + +VV Y+T++ C SDA + +M+ + I P+V TF
Sbjct: 190 GELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF 249
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+LI F G L EA L EMI ++DPN T+N +++GLC G K +M
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G PNVVTYN+L+ G+C V++ + M+ G D+ Y +I+G C++ +
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369
Query: 176 ALTLL 180
AL +
Sbjct: 370 ALDIF 374
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 97/174 (55%), Gaps = 6/174 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K PNVV Y+T+I FCK ++V + L+ M + ++FT+N+LI+G+C VG L+
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-----MKQGVKP-NVVTYNSLMD 130
A+ + M+ + + P+ T ILL GLC G++ + + M++ K +V YN ++
Sbjct: 370 ALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIH 429
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
G C +V KA ++ + GV PD + YT++I GLCK EA L+ K
Sbjct: 430 GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 95/201 (47%), Gaps = 41/201 (20%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V + +++ FC + DAF L M+ PNV +N+LI G C G L A+ L
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK-------------------------VLAVMMK 115
L+EM K + + T+N LL GLC G+ ++ V +K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 116 QG----------------VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQC 159
QG V PN VTYNS+++G C+ G + AK + MA G P+V
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Query: 160 YTVIINGLCKIKMVDEALTLL 180
Y +I+G CK +MVDE + L
Sbjct: 319 YNTLISGFCKFRMVDEGMKLF 339
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 6/174 (3%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
+K+E + ++ ++ +I FC+ +S A + +M+ P++ TF SL++GFC+V
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 72 GLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTY 125
+ +A SL+ M+ +PN +N L+DGLCK G ++L M K+G+ +VVTY
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 126 NSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
N+L+ G C G + A +L M + + PDV +T +I+ K +DEA L
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 6/148 (4%)
Query: 40 SDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNIL 99
DAF L+ EM+ + LP++ F L+ + + I +M + I + Y+F IL
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 100 LDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
+ C+ + VL MMK G +P++VT+ SL+ G+CLV + A ++ M +SG
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 154 TPDVQCYTVIINGLCKIKMVDEALTLLS 181
P+V Y +I+GLCK ++ AL LL+
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLN 200
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
++L +++ + ++ Y+T+I +C+ + A D++ M+++R+ P++ T L++G
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
C+ G ++ A+ D+M +NI++ GLCK KV + +GVKP+
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPD 455
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
TY ++ G C G +A +++ M + G+
Sbjct: 456 ARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 54/107 (50%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ R +L + + + V P+++ + ++ C + + A + +M +
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG 107
+N +I+G C +++A L + ++ + P+A T+ I++ GLCK G
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P+ + I+ + C++ LV+ A + +M+ PN+ F SLI G C G +K+A
Sbjct: 249 IPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 308
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEG---KVLAVMMK----QGVKPNVVTYNSLMDGY 132
+L+EM+ PN YT L+DGLCK G K + +K KPNV TY S++ GY
Sbjct: 309 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY 368
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
C ++N+A+ + + M + G+ P+V YT +ING CK A L++L
Sbjct: 369 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNL 418
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 92/168 (54%), Gaps = 7/168 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN++ ++++I CK + AF++ EM+ PNV+T +LI G C G ++A L
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Query: 81 LDEMIMKNI-DPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYC 133
+++ + PN +T+ ++ G CKE K + + M +QG+ PNV TY +L++G+C
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G +A +++N M G P++ Y I+ LCK EA LL+
Sbjct: 405 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 2 GQTRASLQL-LRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G T + +L L+ + PNV Y+++IG +CK+ ++ A L+S M + + PNV T
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
+ +LI G C G A L++ M + PN YT+N +D LCK+ + +L
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G++ + VTY L+ C ++N+A M ++G D++ ++I C+ K +
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 515
Query: 175 EALTLLSL 182
E+ L L
Sbjct: 516 ESERLFQL 523
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 9/174 (5%)
Query: 19 VMPNVVMYS-TIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEA 77
V+P+ Y +IG F +D + +A + M+ + +P+ T ++ C GL+ A
Sbjct: 213 VVPDSSSYKLMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 78 ISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDG 131
I +MI PN F L+DGLCK+G + L M++ G KPNV T+ +L+DG
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 132 YCLVGEVNKAKDILNSMAQSGV-TPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
C G KA + + +S P+V YT +I G CK ++ A L S K
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 42/216 (19%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
RA + L +++ + + PNV Y+T+I CK A++L + M + +PN++T+N+
Sbjct: 376 RAEM-LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAA 434
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV--------------- 109
I C EA LL++ ++ + T+ IL+ CK+ +
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGF 494
Query: 110 ----------LAVMMKQ----------------GVKPNVVTYNSLMDGYCLVGEVNKAKD 143
+A +Q G+ P TY S++ YC G+++ A
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 144 ILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
++M + G PD Y +I+GLCK MVDEA L
Sbjct: 555 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKL 590
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 95/206 (46%), Gaps = 42/206 (20%)
Query: 16 GKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLK 75
G L + VM ++ +F + +++A + +M + + P+ T N ++ +GL++
Sbjct: 141 GNLQKAHEVM-RCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIE 199
Query: 76 EAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV----------------------- 112
A ++ DEM ++ + P++ ++ +++ G ++GK+
Sbjct: 200 YAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLIL 259
Query: 113 ------------------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVT 154
M+ G KPN++ + SL+DG C G + +A ++L M ++G
Sbjct: 260 TALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWK 319
Query: 155 PDVQCYTVIINGLCKIKMVDEALTLL 180
P+V +T +I+GLCK ++A L
Sbjct: 320 PNVYTHTALIDGLCKRGWTEKAFRLF 345
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
V Y+ +I CK ++ A + M ++ N LI FC +KE+ L
Sbjct: 464 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523
Query: 84 MIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
++ + P T+ ++ CKEG K M + G P+ TY SL+ G C
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 583
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
V++A + +M G++P + CK A+ LL
Sbjct: 584 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILL 626
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 95/165 (57%), Gaps = 6/165 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+VV+ + +I + CK++LV A ++ M + I PNV T++SLI G C G L +A L
Sbjct: 47 DVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL 106
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLV 135
EM K I+PN TF+ L+D K GK V +M++ + PNV TY+SL+ G C+
Sbjct: 107 HEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMH 166
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
V++A +L+ M G TP+V Y+ + NG K VD+ + LL
Sbjct: 167 NRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLL 211
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 109/198 (55%), Gaps = 6/198 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + L +++ K + PNV+ +S +I ++ K +S +Y M+ I PNVFT+
Sbjct: 97 GRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTY 156
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
+SLIYG C+ + EAI +LD MI K PN T++ L +G K +V L M +
Sbjct: 157 SSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ 216
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+GV N V+ N+L+ GY G+++ A + M +G+ P+++ Y +++ GL V++
Sbjct: 217 RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEK 276
Query: 176 ALTLLSLQKWTAKTLFLI 193
AL+ + T L +I
Sbjct: 277 ALSRFEHMQKTRNDLDII 294
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 101/177 (57%), Gaps = 6/177 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L++L++++ + + PNVV YS++I CK ++DA EM +K+I PNV TF++LI
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKP 120
+ G L + S+ MI +IDPN +T++ L+ GLC +V L +M+ +G P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
NVVTY++L +G+ V+ +L+ M Q GV + +I G + +D AL
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P++V S+++ FC + DA + +M I +V LI C L+ A+
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGY 132
+L M + I PN T++ L+ GLCK G++ L M + + PNV+T+++L+D Y
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
G+++K + M Q + P+V Y+ +I GLC VDEA+ +L L
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PNVV YST+ F K V D L +M + + N + N+LI G+ G + A+ +
Sbjct: 186 PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGV 245
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
M + PN ++NI+L GL G+V M K +++TY ++ G C
Sbjct: 246 FGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCK 305
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
V +A D+ + V PD + YT++I L + M EA L
Sbjct: 306 ACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
MMK G++P++VT +SL++G+CL + A + M + G+ DV T++I+ LCK ++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 173 VDEALTLLSLQK 184
V AL +L K
Sbjct: 64 VVPALEVLKRMK 75
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 114/225 (50%), Gaps = 47/225 (20%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G T L+LL +E V+PN V+Y+TI+ SFC++ D+ + +M + ++P++ TF
Sbjct: 196 GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTF 255
Query: 62 NS---------------------------------------LIYGFCIVGLLKEAISLLD 82
NS ++ GFC VGLL++A +L
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF- 314
Query: 83 EMIMKNID-PNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLV 135
E I +N D + ++NI L GL + GK VL M +G+ P++ +YN LMDG C +
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL 374
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G ++ AK I+ M ++GV PD Y +++G C + VD A +LL
Sbjct: 375 GMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 45/224 (20%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL----PN 57
G+ S +++ K+ + ++P++V +++ I + CK+ V DA ++S+M L PN
Sbjct: 231 GRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPN 290
Query: 58 VFTFNSLIYGFCIVGLLK-----------------------------------EAISLLD 82
T+N ++ GFC VGLL+ EA ++L
Sbjct: 291 SITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLK 350
Query: 83 EMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVG 136
+M K I P+ Y++NIL+DGLCK G ++ +M + GV P+ VTY L+ GYC VG
Sbjct: 351 QMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Query: 137 EVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+V+ AK +L M ++ P+ ++++ L K+ + EA LL
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 29/201 (14%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+L+++ K + P++ Y+ ++ CK ++SDA + M + P+ T+ L++G+C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVV 123
VG + A SLL EM+ N PNAYT NILL L K G++ L M ++G + V
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVT-----------------------PDVQCY 160
T N ++DG C GE++KA +I+ M G PD+ Y
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 161 TVIINGLCKIKMVDEALTLLS 181
+ ++NGLCK EA L +
Sbjct: 528 STLLNGLCKAGRFAEAKNLFA 548
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V +Y+ ++ S K++ V LY +M+ I P +TFN LI C + A L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
DEM K PN +TF IL+ G CK G ++L M GV PN V YN+++ +C
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G + ++ ++ M + G+ PD+ + I+ LCK V +A + S
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P ++ +I + C V A +L+ EM K PN FTF L+ G+C GL + +
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
LL+ M + PN +N ++ C+EG K++ M ++G+ P++VT+NS +
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISAL 262
Query: 133 CLVGEVNKAKDILNSMAQSGV----TPDVQCYTVIINGLCKIKMVDEALTLLS 181
C G+V A I + M P+ Y +++ G CK+ ++++A TL
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 6/163 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P+++ YST++ CK ++A +L++EM+ +++ P+ +N I+ FC G + A
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYC 133
+L +M K + T+N L+ GL + ++ + M ++G+ PN+ TYN+ + C
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+V A ++L+ M Q + P+V + +I CK+ D A
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 45/224 (20%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
A+ +L ++ K PN + ++ +CK L +L + M + +LPN +N+++
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL-AVMMKQGV------ 118
FC G ++ ++++M + + P+ TFN + LCKEGKVL A + +
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 119 ---KPNVVTYNSLMDGYCLVGEVNKAKDILNS---------------------------- 147
+PN +TYN ++ G+C VG + AK + S
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIE 344
Query: 148 -------MAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
M G+ P + Y ++++GLCK+ M+ +A T++ L K
Sbjct: 345 AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMK 388
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 31/222 (13%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEM----------- 49
MG+ + +LLRK+ K + V + I+ C + A ++ M
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 50 ------------LAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFN 97
+ LP++ T+++L+ G C G EA +L EM+ + + P++ +N
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 98 ILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQS 151
I + CK+GK VL M K+G ++ TYNSL+ G + ++ + +++ M +
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 152 GVTPDVQCYTVIINGLCKIKMVDEALTLLS--LQKWTAKTLF 191
G++P++ Y I LC+ + V++A LL +QK A +F
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 6/152 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + L ++ G+ + P+ V Y+ I FCK +S AF + +M K ++ T+
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
NSLI G I + E L+DEM K I PN T+N + LC+ KV L MM+
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNS 147
+ + PNV ++ L++ +C V + + A+++ +
Sbjct: 658 KNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET 689
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 110 bits (276), Expect = 4e-25, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
GQ + ++L ++ K +MPNVV YST+I F K +A +L+ EM I + ++
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+L+ + VG +EA+ +L EM I + T+N LL G K+G KV M +
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ V PN++TY++L+DGY G +A +I +G+ DV Y+ +I+ LCK +V
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 176 ALTLL 180
A++L+
Sbjct: 568 AVSLI 572
Score = 99.4 bits (246), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 100/185 (54%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G A+ L ++ + + +V Y+T++ + CK + AF++ ++M KRI+PNV ++
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
+++I GF G EA++L EM I + ++N LL K G+ +L M
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G+K +VVTYN+L+ GY G+ ++ K + M + V P++ Y+ +I+G K + E
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 176 ALTLL 180
A+ +
Sbjct: 533 AMEIF 537
Score = 90.1 bits (222), Expect = 9e-19, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 86/152 (56%), Gaps = 6/152 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G++ +L +LR++ + +VV Y+ ++G + K + +++EM + +LPN+ T
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
+++LI G+ GL KEA+ + E + + ++ L+D LCK G V + M
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILN 146
K+G+ PNVVTYNS++D + ++++ D N
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Score = 87.8 bits (216), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P+ + +++++ + L A +L+ EM +RI +VF++N+L+ C G + A
Sbjct: 335 VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAF 394
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
+L +M +K I PN +++ ++DG K G+ + M G+ + V+YN+L+ Y
Sbjct: 395 EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIY 454
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
VG +A DIL MA G+ DV Y ++ G K DE + + K
Sbjct: 455 TKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Score = 79.3 bits (194), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 9/176 (5%)
Query: 23 VVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGL-LKEAISLL 81
V +S +I ++ + L +A +++ M + PN+ T+N++I G+ K+
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEG-------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
DEM + P+ TFN LL +C G + M + ++ +V +YN+L+D C
Sbjct: 328 DEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTAKTL 190
G+++ A +IL M + P+V Y+ +I+G K DEAL L ++ L
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
LLR + +++ PN V Y+T+I F + V A L +EML+ + PN TFN+LI G
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVV 123
G KEA+ + M K + P+ ++ +LLDGLCK + M + GV +
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
TY ++DG C G +++A +LN M++ G+ PD+ Y+ +ING CK+
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 491
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +A+++LL ++ K V +V Y+ +I C+ ++ + L +M + I PN T+
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+LI GF G + A LL+EM+ + PN TFN L+DG EG K+ +M
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ P+ V+Y L+DG C E + A+ M ++GV YT +I+GLCK +DE
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 176 ALTLLS 181
A+ LL+
Sbjct: 462 AVVLLN 467
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G S L++K+E P +V Y+T++ +CK A +L M +K + +V T+
Sbjct: 247 GSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTY 306
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N LI+ C + + LL +M + I PN T+N L++G EGKVL M+
Sbjct: 307 NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLS 366
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G+ PN VT+N+L+DG+ G +A + M G+TP Y V+++GLCK D
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL 426
Query: 176 A 176
A
Sbjct: 427 A 427
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 6/177 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
LL ++ + P++V YS +I FCK A ++ + + PN +++LIY C
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVV 123
+G LKEAI + + MI++ + +TFN+L+ LCK GKV + M G+ PN V
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+++ L++GY GE KA + + M + G P Y ++ GLCK + EA L
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 7/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G R + + L+ + + VMY+T++ + CK ++ A L+ EM+ + ILP+ +T+
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMK-NIDPNAYTFNILLDGLCKEGKVLA------VMM 114
SLI G C G AI E + N+ PN + +DG+ K G+ A M
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G P++VT N+++DGY +G++ K D+L M P++ Y ++++G K K V
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 811
Query: 175 EALTL 179
+ L
Sbjct: 812 TSFLL 816
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + L+++ + + P+V ++ +I C + + L +M P + T+
Sbjct: 212 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 271
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
N++++ +C G K AI LLD M K +D + T+N+L+ LC+ ++ L M K
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + PN VTYN+L++G+ G+V A +LN M G++P+ + +I+G E
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391
Query: 176 ALTLL 180
AL +
Sbjct: 392 ALKMF 396
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L++ +E K + P+ V Y ++ CK+ A Y M + T+
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 446
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
+I G C G L EA+ LL+EM IDP+ T++ L++G CK G+ ++ + +
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G+ PN + Y++L+ C +G + +A I +M G T D + V++ LCK V E
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566
Query: 176 A 176
A
Sbjct: 567 A 567
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 97/183 (53%), Gaps = 6/183 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
MG+ + LL ++ + PN+ Y+ ++ + K K VS +F LY ++ ILP+ T
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
+SL+ G C +L+ + +L I + ++ + YTFN+L+ C G++ + VM
Sbjct: 832 CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G+ + T ++++ +++ +L+ M++ G++P+ + Y +INGLC++ +
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
Query: 175 EAL 177
A
Sbjct: 952 TAF 954
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 6/186 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + + +++ +I + PN ++YST+I + C+ + +A +Y M+ + + FT
Sbjct: 491 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
FN L+ C G + EA + M I PN +F+ L++G G+ V M
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
K G P TY SL+ G C G + +A+ L S+ D Y ++ +CK +
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 175 EALTLL 180
+A++L
Sbjct: 671 KAVSLF 676
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
+ S +L ++ + + P Y +I C+ + AF + EM+A +I P +++
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL------AVMMKQGV 118
+ G EA LL M+ + P +F L+ CK G V+ VM G+
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
K ++V+YN L+ G C G++ A ++ M G + Y +I GL
Sbjct: 1036 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV---- 112
N ++ LI + G++++++ + M + +P+ YT N +L + K G+ ++V
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 113 --MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
M+K+ + P+V T+N L++ C G K+ ++ M +SG P + Y +++ CK
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 171 KMVDEALTLLSLQK 184
A+ LL K
Sbjct: 282 GRFKAAIELLDHMK 295
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 47 SEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE 106
EM + I P + LI G C VG +K A + +EMI I P + ++ L K
Sbjct: 923 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 982
Query: 107 GK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCY 160
GK +L M+K + P + ++ +LM C G V +A ++ M+ G+ D+ Y
Sbjct: 983 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1042
Query: 161 TVIINGLC 168
V+I GLC
Sbjct: 1043 NVLITGLC 1050
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 102/184 (55%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + ++ +I + + P VV ++T+I +CK + + F L +M R P+VFT+
Sbjct: 254 GNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTY 313
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
++LI C + A L DEM + + PN F L+ G + G++ M+
Sbjct: 314 SALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLS 373
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G++P++V YN+L++G+C G++ A++I++ M + G+ PD YT +I+G C+ V+
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
Query: 176 ALTL 179
AL +
Sbjct: 434 ALEI 437
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 99/175 (56%), Gaps = 6/175 (3%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
+K+ K + P++V+Y+T++ FCK+ + A ++ M+ + + P+ T+ +LI GFC
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 72 GLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTY 125
G ++ A+ + EM I+ + F+ L+ G+CKEG+V L M++ G+KP+ VTY
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 126 NSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+MD +C G+ +L M G P V Y V++NGLCK+ + A LL
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLL 543
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 87/154 (56%), Gaps = 6/154 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
NV +++ ++ FCK+ +SDA ++ E+ + + P V +FN+LI G+C VG L E L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLV 135
+M P+ +T++ L++ LCKE K + M K+G+ PN V + +L+ G+
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
GE++ K+ M G+ PD+ Y ++NG CK
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK 392
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 102/185 (55%), Gaps = 12/185 (6%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G +L ++E P+V YS +I + CK+ + A L+ EM + ++PN
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 61 FNSLIYGFCIVG---LLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV----- 112
F +LI+G G L+KE+ +M+ K + P+ +N L++G CK G ++A
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQ---KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 113 -MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIK 171
M+++G++P+ +TY +L+DG+C G+V A +I M Q+G+ D ++ ++ G+CK
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 172 MVDEA 176
V +A
Sbjct: 465 RVIDA 469
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L++ ++++ + + V +S ++ CK+ V DA EML I P+ T+
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
++ FC G + LL EM P+ T+N+LL+GLCK G+ +L M+
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
GV P+ +TYN+L++G+ N +K + + G+ D+ Y I+N L
Sbjct: 549 IGVVPDDITYNTLLEGHHR--HANSSKRYIQK-PEIGIVADLASYKSIVNEL 597
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 8/152 (5%)
Query: 45 LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
Y E+L NV+ FN L+ FC G + +A + DE+ +++ P +FN L++G C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 105 KEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ 158
K G ++ M K +P+V TY++L++ C +++ A + + M + G+ P+
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 159 CYTVIINGLCKIKMVDEALTLLSLQKWTAKTL 190
+T +I+G + +D L S QK +K L
Sbjct: 347 IFTTLIHGHSRNGEID--LMKESYQKMLSKGL 376
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
+ + +L+R++ K + PNV+ YST+I C + AF ++ML + PN++T +SL
Sbjct: 263 KGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 65 IYGFCIVGLLKEAISLLDEMIMK-NIDPNAYTFNILLDGLCKEG------KVLAVMMKQG 117
+ G + G +A+ L ++MI + PN +N L+ G C G V + M + G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
PN+ TY SL++G+ G ++ A I N M SG P+V YT ++ LC+ EA
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 178 TLLSL 182
+L+ +
Sbjct: 443 SLIEI 447
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 12/184 (6%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G + +L + E P V +Y+ +I CK+ AF+L EM+ K I PNV +
Sbjct: 229 VGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVIS 283
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL-------AVM 113
+++LI C G ++ A S L +M+ + PN YT + L+ G G ++
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
G++PNVV YN+L+ G+C G + KA + + M + G +P+++ Y +ING K +
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 174 DEAL 177
D A+
Sbjct: 404 DGAV 407
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 13/201 (6%)
Query: 2 GQTRASLQLLRK-IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G T +L L + I G + PNVV Y+T++ FC + A ++S M PN+ T
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
+ SLI GF G L A+ + ++M+ PN + +++ LC+ K ++ +M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG-VTPDVQCYTVIINGLCKIKMV 173
K+ P+V T+N+ + G C G ++ A+ + M Q P++ Y +++GL K +
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 174 DEALTL-----LSLQKWTAKT 189
+EA L + +W++ T
Sbjct: 510 EEAYGLTREIFMRGVEWSSST 530
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 12/177 (6%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PNVV+Y+ ++ + C+ +A L M + P+V TFN+ I G C G L A +
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 81 LDEMIMKN-IDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYC 133
+M ++ PN T+N LLDGL K ++ + +GV+ + TYN+L+ G C
Sbjct: 480 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 539
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL-----QKW 185
G A ++ M G +PD +II CK + A +L L +KW
Sbjct: 540 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKW 596
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 9/186 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G ++++ +I+ P+V +Y+ ++ + + + + +Y +M PNVFT
Sbjct: 124 VGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFT 183
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVLAVMMK 115
+N L+ C + A LL EM K P+A ++ ++ +C KEG+ LA
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA---- 239
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ +P V YN+L++G C + A +++ M + G++P+V Y+ +IN LC ++
Sbjct: 240 ERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 299
Query: 176 ALTLLS 181
A + L+
Sbjct: 300 AFSFLT 305
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 9/170 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK-RILPNVFTFNSLIYGFCIVGLLKEAIS 79
P+V ++ I C + A ++ +M + R PN+ T+N L+ G ++EA
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYC 133
L E+ M+ ++ ++ T+N LL G C G +++ MM G P+ +T N ++ YC
Sbjct: 515 LTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 134 LVGEVNKAKDILN--SMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G+ +A +L+ S + PDV YT +I GLC+ ++ + LL
Sbjct: 575 KQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLE 624
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 2 GQTRASLQLLRKIEGK-LVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G+ + ++ R++E + PN+V Y+ ++ K + +A+ L E+ + + + T
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV--------LAV 112
+N+L++G C GL A+ L+ +M++ P+ T N+++ CK+GK L
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
++ +P+V++Y +++ G C +L M +G+ P + ++V+IN
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------ 114
F S+I + VGL + A+ + + DP+ +N +LD L E ++ + M
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ G +PNV TYN L+ C +V+ AK +L M+ G PD YT +I+ +C++ +V
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 175 EALTL 179
E L
Sbjct: 234 EGREL 238
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 106/184 (57%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L ++ ++P+ V+Y+ +I +C+ ++S A +L +EML + +V T+
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N++++G C +L EA L +EM + + P++YT IL+DG CK G ++ M +
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ ++ +VVTYN+L+DG+ VG+++ AK+I M + P Y++++N LC + E
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 176 ALTL 179
A +
Sbjct: 569 AFRV 572
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 100/176 (56%), Gaps = 6/176 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
L +++ K V P++V Y+T+I ++ L+ +AF+L + M K P V+T+N++I G C
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVV 123
G + A + EM+ + P++ T+ LL CK+G KV + M + V P++V
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
++S+M + G ++KA NS+ ++G+ PD YT++I G C+ M+ A+ L
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 104/188 (55%), Gaps = 8/188 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G + +++L +K++ K + +VV Y+T++ F K + A +++++M++K ILP +
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
++ L+ C G L EA + DEMI KNI P N ++ G C+ G L M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM--AQSGVTPDVQCYTVIINGLCKIKM 172
+G P+ ++YN+L+ G+ ++KA ++ M Q G+ PDV Y I++G C+
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 173 VDEALTLL 180
+ EA +L
Sbjct: 673 MKEAEVVL 680
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K ++P + YS ++ + C +++AF ++ EM++K I P V NS+I G+C G +
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKE---GKVLAVMMKQ-----GVKPNVVTYNSL 128
S L++MI + P+ ++N L+ G +E K ++ K G+ P+V TYNS+
Sbjct: 604 GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI 663
Query: 129 MDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+ G+C ++ +A+ +L M + GV PD YT +ING + EA +
Sbjct: 664 LHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
NV + ++ + CKD + S++ K + P++ T+N+LI + GL++EA L+
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLV 135
+ M K P YT+N +++GLCK GK V A M++ G+ P+ TY SL+ C
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
G+V + + + + M V PD+ C++ +++ + +D+AL
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L+ + GK P V Y+T+I CK A ++++EML + P+ T+
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------K 115
SL+ C G + E + +M +++ P+ F+ ++ + G + +M +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G+ P+ V Y L+ GYC G ++ A ++ N M Q G DV Y I++GLCK KM+ E
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 176 ALTLLSLQKWTAKTLF 191
A L + + T + LF
Sbjct: 464 ADKLFN--EMTERALF 477
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 90/161 (55%), Gaps = 6/161 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N ++ +I ++ + + + +A + ++ + +K ++ N+LI +G ++ A +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLV 135
E+ + N YT NI+++ LCK+GK+ L+ + ++GV P++VTYN+L+ Y
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G + +A +++N+M G +P V Y +INGLCK + A
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 92/178 (51%), Gaps = 8/178 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ Y +++ CK V + ++S+M ++ ++P++ F+S++ F G L +A+
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVVTYNSLMDGYCL 134
+ + + P+ + IL+ G C++G + M ++QG +VVTYN+++ G C
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTAKTLFL 192
+ +A + N M + + PD T++I+G CK+ + A+ L QK K + L
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL--FQKMKEKRIRL 513
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + ++ ++ K + P V++ +++I +C+ SD +M+++ +P+ ++
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKN--IDPNAYTFNILLDGLCKEGK------VLAVM 113
N+LIYGF + +A L+ +M + + P+ +T+N +L G C++ + VL M
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKM 683
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD 156
+++GV P+ TY +++G+ + +A I + M Q G +PD
Sbjct: 684 IERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + ++ + + V+P++V +S+++ F + + A ++ + ++P+ +
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMK 115
LI G+C G++ A++L +EM+ + + T+N +L GLCK K+ M +
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P+ T L+DG+C +G + A ++ M + + DV Y +++G K+ +D
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 176 A 176
A
Sbjct: 534 A 534
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 6/170 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K V P+V +++T I +FCK V +A L+S+M + PNV TFN++I G + G E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMD 130
A ++M+ + ++P T++IL+ GL + + VL M K+G PNV+ YN+L+D
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ G +NKA +I + M G++ Y +I G CK D A LL
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Score = 110 bits (274), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+T + ++ K V PN V+Y+ +I ++C+ +S A +L +M K I PN T+
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQ 116
SLI G I+ ++EA L +EM M+ ++PN + + L+DG K G+++ V M +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
V PN +TY ++ GY G V +A +LN M + G+ PD Y I G K V EA
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Query: 177 LTLLSLQKWTA 187
+ + A
Sbjct: 805 FKGSDEENYAA 815
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 6/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
M + ++Q + ++P+V YS +I CK + + + + EM++K + PN
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVLAVMMK 115
+N LI +C G L A+ L ++M K I PN+ T+ L+ G+ +E K+L M+
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 116 -QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+G++PNV Y +L+DGY +G++ K + +L M V P+ YTV+I G + V
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 175 EALTLLS 181
EA LL+
Sbjct: 768 EASRLLN 774
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 100/181 (55%), Gaps = 6/181 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++ ++I G+ + + V Y+T+I C K + +AF EM+ + + P+ +T+
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK-----EGK-VLAVMMK 115
+ LI G + ++EAI D+ + P+ YT+++++DG CK EG+ MM
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ V+PN V YN L+ YC G ++ A ++ M G++P+ YT +I G+ I V+E
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 176 A 176
A
Sbjct: 699 A 699
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P + +T+I CK S A +L+ + L K + + T N+L++G C G L EA +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
E++ + + ++N L+ G C + K+ L M+K+G+KP+ TY+ L+ G
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ +V +A + ++G+ PDV Y+V+I+G CK + +E
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +++L K+E V PNVV ++T+I +AF +M+ + + P + T+
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+ L+ G + +A +L EM K PN +N L+D + G ++ +M+
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ TYN+L+ GYC G+ + A+ +L M G + +T +I LC M D
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 176 ALTLL 180
AL +
Sbjct: 454 ALRFV 458
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+T+I +CK+ +A L EML+ N +F S+I C + A+ + EM+
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 86 MKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVVTYNSLMDGYCLVGEVN 139
++N+ P L+ GLCK GK + + +G + T N+L+ G C G+++
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+A I + G D Y +I+G C K +DEA L
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 6/170 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K V P+V +++T I +FCK V +A L+S+M + PNV TFN++I G + G E
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMD 130
A ++M+ + ++P T++IL+ GL + + VL M K+G PNV+ YN+L+D
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ G +NKA +I + M G++ Y +I G CK D A LL
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Score = 110 bits (274), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+T + ++ K V PN V+Y+ +I ++C+ +S A +L +M K I PN T+
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQ 116
SLI G I+ ++EA L +EM M+ ++PN + + L+DG K G+++ V M +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
V PN +TY ++ GY G V +A +LN M + G+ PD Y I G K V EA
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Query: 177 LTLLSLQKWTA 187
+ + A
Sbjct: 805 FKGSDEENYAA 815
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 6/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
M + ++Q + ++P+V YS +I CK + + + + EM++K + PN
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVLAVMMK 115
+N LI +C G L A+ L ++M K I PN+ T+ L+ G+ +E K+L M+
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 116 -QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+G++PNV Y +L+DGY +G++ K + +L M V P+ YTV+I G + V
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 175 EALTLLS 181
EA LL+
Sbjct: 768 EASRLLN 774
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 100/181 (55%), Gaps = 6/181 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++ ++I G+ + + V Y+T+I C K + +AF EM+ + + P+ +T+
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK-----EGK-VLAVMMK 115
+ LI G + ++EAI D+ + P+ YT+++++DG CK EG+ MM
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ V+PN V YN L+ YC G ++ A ++ M G++P+ YT +I G+ I V+E
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Query: 176 A 176
A
Sbjct: 699 A 699
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P + +T+I CK S A +L+ + L K + + T N+L++G C G L EA +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
E++ + + ++N L+ G C + K+ L M+K+G+KP+ TY+ L+ G
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ +V +A + ++G+ PDV Y+V+I+G CK + +E
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +++L K+E V PNVV ++T+I +AF +M+ + + P + T+
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+ L+ G + +A +L EM K PN +N L+D + G ++ +M+
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ TYN+L+ GYC G+ + A+ +L M G + +T +I LC M D
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 176 ALTLL 180
AL +
Sbjct: 454 ALRFV 458
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+T+I +CK+ +A L EML+ N +F S+I C + A+ + EM+
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 86 MKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVVTYNSLMDGYCLVGEVN 139
++N+ P L+ GLCK GK + + +G + T N+L+ G C G+++
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+A I + G D Y +I+G C K +DEA L
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 96/168 (57%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ PNVV Y+ +I C+D + +AF +Y ++L + + P++ T++SLI GFC G L+
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
+L ++MI P+ + +L+DGL K+G +L M+ Q ++ NVV +NSL+DG+
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C + ++A + M G+ PDV +T ++ ++EAL L
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 101/184 (54%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + L + +E + + P+++ YST+I + K ++ L+S+ L K + +V F
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+S I + G L A + M+ + I PN T+ IL+ GLC++G++ ++K
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G++P++VTY+SL+DG+C G + + M + G PDV Y V+++GL K ++
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 176 ALTL 179
A+
Sbjct: 480 AMRF 483
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
LQL ++ + ++ + + +I K + DA ++ ++ ++ P++ T+N++I
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
G+C + L EA + + + + PN T IL+ LCK ++ ++M ++G KP
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
N VTY LMD + ++ + + M + G++P + Y++II+GLCK VDEA +
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 181 SLQKWTAKTL 190
Q AK L
Sbjct: 765 H-QAIDAKLL 773
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
Query: 14 IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGL 73
IEGK+ P++V Y+T+I +C + + +A ++ + PN T LI+ C
Sbjct: 628 IEGKM-EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 74 LKEAISLLDEMIMKNIDPNAYTFNILLDGLCK----EG--KVLAVMMKQGVKPNVVTYNS 127
+ AI + M K PNA T+ L+D K EG K+ M ++G+ P++V+Y+
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 128 LMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI-KMVDEAL 177
++DG C G V++A +I + + + PDV Y ++I G CK+ ++V+ AL
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+L + K V +VV++S+ I + K ++ A +Y ML + I PNV T+ LI G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNV 122
C G + EA + +++ + ++P+ T++ L+DG CK G + + M+K G P+V
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
V Y L+DG G + A M + +V + +I+G C++ DEAL + L
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Query: 56 PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KV 109
PNV TF +LI GFC G + A L M + I+P+ ++ L+DG K G K+
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 110 LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+ + +GVK +VV ++S +D Y G++ A + M G++P+V YT++I GLC+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 170 IKMVDEALTL 179
+ EA +
Sbjct: 404 DGRIYEAFGM 413
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN V + +I CK+ + A ++S M K PN T+ L+ F ++ + L
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--MMKQGVK----PNVVTYNSLMDGYCL 134
+EM K I P+ +++I++DGLCK G+V + Q + P+VV Y L+ GYC
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 135 VGEVNKAKDILNSMAQSGVTPD 156
VG + +A + M ++GV PD
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPD 810
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 13 KIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVG 72
K+ G+ + NVV+++++I +C+ +A ++ M I P+V TF +++ + G
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEG 545
Query: 73 LLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYN 126
L+EA+ L M ++P+A + L+D CK K + +M + + ++ N
Sbjct: 546 RLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 605
Query: 127 SLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWT 186
++ + A N++ + + PD+ Y +I G C ++ +DEA + L K T
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 665
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
S +L +++ K + P++V YS II CK V +A +++ + + ++LP+V + LI
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPN 92
G+C VG L EA L + M+ + P+
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG--FCIVGLLKEAISLLD 82
M +++IGS D L++D FD ++ I P+ + + + FC G + +A+
Sbjct: 187 MLNSLIGSDRVD-LIADHFD---KLCRGGIEPSGVSAHGFVLDALFC-KGEVTKALDFHR 241
Query: 83 EMIMKNIDPNAYTFNILLDGLCKE-----GKVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
++ + + N +L GL + ++L++++ G PNVVT+ +L++G+C GE
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+++A D+ M Q G+ PD+ Y+ +I+G K M+ L S
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL-PNVFT 60
G+ +L +++ N + ++ +I K V DA DLY ++++ R P T
Sbjct: 834 GKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 893
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
+ LI G G L EA L + M+ PN +NIL++G K G+ A M+
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
K+GV+P++ TY+ L+D C+VG V++ + +SG+ PDV CY +IINGL K ++
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 175 EALTLLSLQKWT 186
EAL L + K +
Sbjct: 1014 EALVLFNEMKTS 1025
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
Q ++E +P+VV ++ ++ + CK +AFD M + ILPN+ T+N+LI G
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNV 122
V L +A+ L M + P AYT+ + +D K G ++ M +G+ PN+
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNI 468
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
V N+ + G +AK I + G+ PD Y +++ K+ +DEA+ LLS
Sbjct: 469 VACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 527
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 100/187 (53%), Gaps = 7/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ +++LL ++ P+V++ +++I + K V +A+ ++ M ++ P V T
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+N+L+ G G ++EAI L + M+ K PN TFN L D LCK K+L MM
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G P+V TYN+++ G G+V +A + M + V PD ++ G+ K +++
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIE 694
Query: 175 EALTLLS 181
+A +++
Sbjct: 695 DAYKIIT 701
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ R + Q+ ++ ++P+ V Y+ ++ + K + +A L SEM+ P+V
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
NSLI + EA + M + P T+N LL GL K GK+ M++
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G PN +T+N+L D C EV A +L M G PDV Y II GL K V E
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 176 ALTLLSLQK 184
A+ K
Sbjct: 662 AMCFFHQMK 670
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 7/171 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ A+ L +++ + V P++ YS ++ C V + + E+ + P+V +
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 62 NSLIYGFCIVGLLKEAISLLDEM-IMKNIDPNAYTFNILL-----DGLCKE-GKVLAVMM 114
N +I G L+EA+ L +EM + I P+ YT+N L+ G+ +E GK+ +
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
+ G++PNV T+N+L+ GY L G+ A + +M G +P+ Y + N
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + ++L+ K++ K + PN+V + + S K +A ++ + ++P+ T+
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
N ++ + VG + EAI LL EM+ +P+ N L++ L K +V M +
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+KP VVTYN+L+ G G++ +A ++ M Q G P+ + + + LCK V
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 176 ALTLL 180
AL +L
Sbjct: 627 ALKML 631
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 7/169 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P + Y+ +IG + ++ A D++ ++ + +P+V T+N L+ + G + E
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-------LAVMMKQGVKPNVVTYNSLMDG 131
L EM + N T NI++ GL K G V +M + P TY L+DG
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G + +AK + M G P+ Y ++ING K D A L
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALF 949
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + QL + PN +Y+ +I F K A L+ M+ + + P++ T+
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK-----EGKVLAVMMK- 115
+ L+ C+VG + E + E+ ++P+ +N++++GL K E VL MK
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 116 -QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
+G+ P++ TYNSL+ + G V +A I N + ++G+ P+V + +I G
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++++ R++ + P++ YS+++ K + + L EM + PNV+TF I
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIR 266
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKP 120
G + EA +L M + P+ T+ +L+D LC K V M KP
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ VTY +L+D + +++ K + M + G PDV +T++++ LCK EA L
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 181 SLQK 184
+ +
Sbjct: 387 DVMR 390
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 1 MGQTR---ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPN 57
+G+ R + + LL+++E + PNV ++ I + +++A+++ M + P+
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 292
Query: 58 VFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV----- 112
V T+ LI C L A + ++M P+ T+ LLD + +V
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 113 -MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIK 171
M K G P+VVT+ L+D C G +A D L+ M G+ P++ Y +I GL ++
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 172 MVDEALTLL 180
+D+AL L
Sbjct: 413 RLDDALELF 421
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-ILPNVF 59
+G+ L ++++ + P+VV Y+ II K + +A L++EM R I P+++
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVM 113
T+NSLI I G+++EA + +E+ ++PN +TFN L+ G GK V M
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Query: 114 MKQGVKPNVVTYNSL 128
+ G PN TY L
Sbjct: 1094 VTGGFSPNTGTYEQL 1108
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 7/163 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P Y +I K + +A L+ ML PN +N LI GF G A +L
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
M+ + + P+ T+++L+D LC G+V + + G+ P+VV YN +++G
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 135 VGEVNKAKDILNSMAQS-GVTPDVQCYTVIINGLCKIKMVDEA 176
+ +A + N M S G+TPD+ Y +I L MV+EA
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM--M 114
N +++N LI+ EA+ + MI++ P+ T++ L+ GL K + +VM +
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 115 KQ----GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
K+ G+KPNV T+ + G++N+A +IL M G PDV YTV+I+ LC
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 171 KMVDEA 176
+ +D A
Sbjct: 307 RKLDCA 312
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 97/231 (41%), Gaps = 48/231 (20%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L++L K+ +P+V Y+TII K+ V +A + +M K + P+ T +L+
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLP 685
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDP--------------------NAYTFN--ILLDGLC 104
G L+++A ++ + D NA +F+ ++ +G+C
Sbjct: 686 GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGIC 745
Query: 105 KEGKVLAVMMKQ----------------------GVKPNVVTYNSLMDGYCLVGEVNKAK 142
++G + V + + GV+P + TYN L+ G + A+
Sbjct: 746 RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQ 805
Query: 143 DILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL---LSLQKWTAKTL 190
D+ + +G PDV Y +++ K +DE L +S + A T+
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTI 856
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 97/173 (56%), Gaps = 6/173 (3%)
Query: 15 EGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLL 74
E L +V+ Y+ II CK+ + A +L S ++ + N T+NSLI G C G L
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 75 KEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSL 128
EA+ L D + + P+ T+ IL+D LCKEG K+L M+ +G+ PN++ YNS+
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 129 MDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+DGYC +G+ A +++ VTPD + +I G CK ++EAL++ +
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFT 819
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 102/174 (58%), Gaps = 11/174 (6%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
R++ K + +VV YS +I K+ V +A L +M+ + + PN+ T+ ++I G C +
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 72 GLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTY 125
G L+EA L + ++ I+ + + + L+DG+C++G + L M ++G++P+++TY
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 126 NSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
N++++G C+ G V++A ++ GV DV Y+ +++ K++ +D L +
Sbjct: 386 NTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEI 434
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ L+R++E + + V YS I + K + DA EM+ K + +V +
Sbjct: 220 LGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVS 279
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
++ LI G G ++EA+ LL +MI + ++PN T+ ++ GLCK GK + ++
Sbjct: 280 YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL 339
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G++ + Y +L+DG C G +N+A +L M Q G+ P + Y +INGLC V
Sbjct: 340 SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 399
Query: 175 EA 176
EA
Sbjct: 400 EA 401
Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 36/216 (16%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L LL K+ + V PN++ Y+ II CK + +AF L++ +L+ I + F +
Sbjct: 291 GNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL-AVMMKQGVKP 120
+LI G C G L A S+L +M + I P+ T+N +++GLC G+V A + +GV
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG 410
Query: 121 NVVTYNSLMDGYC-----------------------------------LVGEVNKAKDIL 145
+V+TY++L+D Y L+G +A +
Sbjct: 411 DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALY 470
Query: 146 NSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+M + +TPD Y +I G CK ++EAL + +
Sbjct: 471 RAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN 506
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 101/173 (58%), Gaps = 6/173 (3%)
Query: 14 IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGL 73
++ +++PN+V Y+T++ + C+ V + DL + + + +++ I+G+ G
Sbjct: 198 VDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGA 257
Query: 74 LKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNS 127
L +A+ EM+ K ++ + +++IL+DGL KEG V L M+K+GV+PN++TY +
Sbjct: 258 LVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTA 317
Query: 128 LMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
++ G C +G++ +A + N + G+ D Y +I+G+C+ ++ A ++L
Sbjct: 318 IIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSML 370
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L+L +E ++P+ V Y +I + CK+ L DA L M++K ++PN+ +NS++
Sbjct: 709 ALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVD 768
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
G+C +G ++A+ ++ +M + P+A+T + ++ G CK+G V + +
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISA 828
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSM 148
+ + L+ G+C G + +A+ +L M
Sbjct: 829 DFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
MG+ + L +I + + +Y T+I C+ ++ AF + +M + I P++ T
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 61 FNSLIYGFCIVGLLKEA--------------ISLLDEMI-MKNIDP-------------- 91
+N++I G C+ G + EA +LLD I ++NID
Sbjct: 385 YNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIP 444
Query: 92 ------NAYTFNILLDGLCKEGKVLAVMMKQ-GVKPNVVTYNSLMDGYCLVGEVNKAKDI 144
N LL G E L M + + P+ TY +++ GYC G++ +A ++
Sbjct: 445 MDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEM 504
Query: 145 LNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTAKTLFL 192
N + +S V+ V CY II+ LCK M+D A +L ++ W K L+L
Sbjct: 505 FNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVL-IELW-EKGLYL 549
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 7/162 (4%)
Query: 27 STIIGSFCKDKLVSDAFDLYSEMLAKRIL-PNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
S +I FCK A + + +L PN+ T+ +L+ C +G + E L+ +
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 86 MKNIDPNAYTFNILLDGLCKEGKVLAVMMK------QGVKPNVVTYNSLMDGYCLVGEVN 139
+ + + ++ + G K G ++ +M+ +G+ +VV+Y+ L+DG G V
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+A +L M + GV P++ YT II GLCK+ ++EA L +
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFN 336
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 46/208 (22%)
Query: 19 VMPNVVMYSTIIGSFC--KDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
+ P M ++I F +D L + P+ TF SLIY F G +
Sbjct: 93 IFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDN 152
Query: 77 AISLLDEMIMKNID-P-NAYTFNILLDGLCKEGK------VLAVMMKQGV-KPNVVTYNS 127
AI +L+ M KN++ P + + + ++ G CK GK + GV PN+VTY +
Sbjct: 153 AIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTT 212
Query: 128 LMDGYCLVGEVNKAKDIL-----------------------------------NSMAQSG 152
L+ C +G+V++ +D++ M + G
Sbjct: 213 LVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKG 272
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ DV Y+++I+GL K V+EAL LL
Sbjct: 273 MNRDVVSYSILIDGLSKEGNVEEALGLL 300
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 97/242 (40%), Gaps = 65/242 (26%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
MG + L R + + P+ Y+T+I +CK + +A ++++E L K +
Sbjct: 460 MGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE-LRKSSVSAAVC 518
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG------------------ 102
+N +I C G+L A +L E+ K + + +T LL
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLE 578
Query: 103 -----------------LCKEG------KVLAVMMKQGVKPNVVTYNSL----------- 128
LCK G +V +M ++G+ VT+ S
Sbjct: 579 QLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGL---TVTFPSTILKTLVDNLRS 635
Query: 129 MDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTAK 188
+D Y LV VN + L+SM DV YT+IINGLCK + +AL L S K
Sbjct: 636 LDAYLLV--VNAGETTLSSM-------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGV 686
Query: 189 TL 190
TL
Sbjct: 687 TL 688
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 1 MGQTRASLQLL-RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVF 59
+GQT +++++ RK+ G+ V P+ S++I +CK + +A +++E K I + F
Sbjct: 773 LGQTEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFF 831
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIM 86
F LI GFC G ++EA LL EM++
Sbjct: 832 GFLFLIKGFCTKGRMEEARGLLREMLV 858
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 6 ASLQLLRK-IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
A L++ R+ +E K+ M ++VM + ++ +F +A LY M + P+ T+ ++
Sbjct: 430 AVLEIRRRFLEAKIPM-DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATM 488
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGV 118
I G+C G ++EA+ + +E+ ++ A +N ++D LCK+G +VL + ++G+
Sbjct: 489 IKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGL 547
Query: 119 KPNVVTYNSLM 129
++ T +L+
Sbjct: 548 YLDIHTSRTLL 558
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 90/153 (58%), Gaps = 6/153 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ PNVV Y+ +I C+D + +AF +Y ++L + + P++ T++SLI GFC G L+
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
+L ++MI P+ + +L+DGL K+G +L M+ Q ++ NVV +NSL+DG+
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
C + ++A + M G+ PDV +T ++
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 101/184 (54%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + L + +E + + P+++ YST+I + K ++ L+S+ L K + +V F
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 359
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+S I + G L A + M+ + I PN T+ IL+ GLC++G++ ++K
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G++P++VTY+SL+DG+C G + + M + G PDV Y V+++GL K ++
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 176 ALTL 179
A+
Sbjct: 480 AMRF 483
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
LQL ++ + ++ + + +I K + DA ++ ++ ++ P++ T+N++I
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
G+C + L EA + + + + PN T IL+ LCK ++ ++M ++G KP
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 675
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
N VTY LMD + ++ + + M + G++P + Y++II+GLCK VDEA +
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Query: 181 SLQKWTAKTL 190
Q AK L
Sbjct: 736 H-QAIDAKLL 744
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 8/171 (4%)
Query: 14 IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGL 73
IEGK+ P++V Y+T+I +C + + +A ++ + PN T LI+ C
Sbjct: 599 IEGKM-EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 74 LKEAISLLDEMIMKNIDPNAYTFNILLDGLCK----EG--KVLAVMMKQGVKPNVVTYNS 127
+ AI + M K PNA T+ L+D K EG K+ M ++G+ P++V+Y+
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 128 LMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI-KMVDEAL 177
++DG C G V++A +I + + + PDV Y ++I G CK+ ++V+ AL
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 768
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+L + K V +VV++S+ I + K ++ A +Y ML + I PNV T+ LI G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNV 122
C G + EA + +++ + ++P+ T++ L+DG CK G + + M+K G P+V
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
V Y L+DG G + A M + +V + +I+G C++ DEAL + L
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 6/130 (4%)
Query: 56 PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KV 109
PNV TF +LI GFC G + A L M + I+P+ ++ L+DG K G K+
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 110 LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+ + +GVK +VV ++S +D Y G++ A + M G++P+V YT++I GLC+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 170 IKMVDEALTL 179
+ EA +
Sbjct: 404 DGRIYEAFGM 413
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN V + +I CK+ + A ++S M K PN T+ L+ F ++ + L
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--MMKQGVK----PNVVTYNSLMDGYCL 134
+EM K I P+ +++I++DGLCK G+V + Q + P+VV Y L+ GYC
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Query: 135 VGEVNKAKDILNSMAQSGVTPD 156
VG + +A + M ++GV PD
Sbjct: 760 VGRLVEAALLYEHMLRNGVKPD 781
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 47/228 (20%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G R+ L + P+VV+Y ++ K L+ A +ML + I NV F
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTF------NILLDGLCKE--------- 106
NSLI G+C + EA+ + M + I P+ TF +I+ D CK
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559
Query: 107 --------------------------------GKVLAVMMKQGVKPNVVTYNSLMDGYCL 134
K +++ ++P++VTYN+++ GYC
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 619
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
+ +++A+ I + + P+ T++I+ LCK +D A+ + S+
Sbjct: 620 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 667
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
S +L +++ K + P++V YS II CK V +A +++ + + ++LP+V + LI
Sbjct: 695 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPN 92
G+C VG L EA L + M+ + P+
Sbjct: 755 RGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG--FCIVGLLKEAISLLD 82
M +++IGS D L++D FD ++ I P+ + + + FC G + +A+
Sbjct: 187 MLNSLIGSDRVD-LIADHFD---KLCRGGIEPSGVSAHGFVLDALFC-KGEVTKALDFHR 241
Query: 83 EMIMKNIDPNAYTFNILLDGLCKE-----GKVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
++ + + N +L GL + ++L++++ G PNVVT+ +L++G+C GE
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+++A D+ M Q G+ PD+ Y+ +I+G K M+ L S
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 101/182 (55%), Gaps = 6/182 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L+L +++ + P+V +Y+ +I CK K ++DA L+ EMLA+R+LP++ T+N+LI G
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPN 121
+C G +++ + + M +I+P+ TFN LL GL K G VL M G P+
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
T++ L DGY + A + + SGV + ++++N LCK +++A +L
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILG 378
Query: 182 LQ 183
+
Sbjct: 379 RE 380
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 7/167 (4%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+L+++E MPNVV Y T+I CK + +A + +M + + P V +N LI G
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
C G +++A EM+ K I+ N T+N L+DGL GK +L + ++G+KP+
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
V TYNSL+ GY G V + + M +SG+ P ++ Y ++I+ LC
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LC 644
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 99/172 (57%), Gaps = 6/172 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + + + K++ K V P+V Y+ +IG + + FD+ EM +PNV +
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
+ +LI C L EA + +M + + P +N+L+DG C +GK+ M+
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
K+G++ N+VTYN+L+DG + G++++A+D+L +++ G+ PDV Y +I+G
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q R ++ + I P+ MY I + K V +L++ M RI P+VF +N
Sbjct: 159 QFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYN 218
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQ 116
LI G C + +A L DEM+ + + P+ T+N L+DG CK G KV M
Sbjct: 219 VLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD 278
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
++P+++T+N+L+ G G V A+++L M G PD ++++ +G + + A
Sbjct: 279 HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAA 338
Query: 177 L 177
L
Sbjct: 339 L 339
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 76/248 (30%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
QL ++ + ++P+++ Y+T+I +CK +F + M A I P++ TFN+L+ G
Sbjct: 235 QLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG-------------------------- 102
G++++A ++L EM P+A+TF+IL DG
Sbjct: 295 FKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNA 354
Query: 103 ---------LCKEGKV-----------------------------------------LAV 112
LCKEGK+ +
Sbjct: 355 YTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEA 414
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
M KQG+KP+ + YN L+ +C +GE+ A+ +N M GV+P V+ Y ++I G +
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 173 VDEALTLL 180
D+ +L
Sbjct: 475 FDKCFDIL 482
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 98/184 (53%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++L + K ++PN V+Y+T+I +C+ + A M + + P+ +
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N LI FC +G ++ A +++M +K + P+ T+NIL+ G ++ + +L M
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G PNVV+Y +L++ C ++ +A+ + M GV+P V+ Y ++I+G C +++
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 176 ALTL 179
A
Sbjct: 548 AFRF 551
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N S ++ + CK+ + A ++ +AK ++PN +N++I G+C G L A +
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLV 135
+ M + + P+ +N L+ C+ G K + M +GV P+V TYN L+ GY
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
E +K DIL M +G P+V Y +IN LCK + EA
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + +++ K + N+V Y+T+I +S+A DL E+ K + P+VFT+
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM--KQGVK 119
NSLI G+ G ++ I+L +EM I P T+++L+ KEG L + + +K
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLK 662
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
P+++ YN ++ Y + G++ KA ++ M + + D Y +I G K+ + E +L
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 180 L 180
+
Sbjct: 723 I 723
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 54 ILPNVFTFNSLIYGFCIVGLLK-----EAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
IL + F + +YG I +K + + L + M I P+ + +N+L+DGLCK +
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKR 229
Query: 109 ------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTV 162
+ M+ + + P+++TYN+L+DGYC G K+ + M + P + +
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 163 IINGLCKIKMVDEALTLLSLQK 184
++ GL K MV++A +L K
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMK 311
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Query: 4 TRASLQLLRKIEGKLVM-PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
T+ ++L ++ G++ + P++++Y+ ++ + + AF+L +M+ K I + T+N
Sbjct: 645 TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQ 116
SLI G VG L E SL+DEM + ++P A T+NI++ G C+ ++ M ++
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Query: 117 GVKPNVVTYNSLMDG 131
G +V N L+ G
Sbjct: 765 GFLLDVCIGNELVSG 779
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + + L +++ + P + Y +I S C + + L+ EM K P++ +
Sbjct: 613 GNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLK---PDLLVY 668
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N +++ + + G +++A +L +MI K+I + T+N L+ G K GK+ V M
Sbjct: 669 NGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNA 728
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ ++P TYN ++ G+C V + A M + G DV +++GL + E
Sbjct: 729 REMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKE 788
Query: 176 ALTLLS 181
A ++S
Sbjct: 789 AEIVIS 794
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 9/177 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +LL ++E K V P++ Y+T+I +CK + +A + M + PN+ T+
Sbjct: 217 GDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTY 276
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
NS I+GF G ++EA L E I ++ N T+ L+DG C+ ++ VM
Sbjct: 277 NSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMES 335
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD-VQCYTVIINGLCKIK 171
+G P VVTYNS++ C G + +A +L M+ + PD + C T +IN CKI+
Sbjct: 336 RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT-LINAYCKIE 391
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 101/185 (54%), Gaps = 7/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ R + +L R+I+ V N V Y+T+I +C+ + +A L M ++ P V T+
Sbjct: 287 GRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTY 345
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK-EGKVLAV-----MMK 115
NS++ C G ++EA LL EM K I+P+ T N L++ CK E V AV M++
Sbjct: 346 NSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIE 405
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G+K ++ +Y +L+ G+C V E+ AK+ L SM + G +P Y+ +++G DE
Sbjct: 406 SGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDE 465
Query: 176 ALTLL 180
LL
Sbjct: 466 ITKLL 470
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V+ N+ +Y+ ++ + K A L SEM K + P++FT+N+LI +C + EA+
Sbjct: 199 VVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEAL 258
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-----LAVMMKQGVKPNVVTYNSLMDGYC 133
S+ D M + PN T+N + G +EG++ L +K V N VTY +L+DGYC
Sbjct: 259 SVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYC 318
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ ++++A + M G +P V Y I+ LC+ + EA LL+
Sbjct: 319 RMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLT 366
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
M +L+L +E + P VV Y++I+ C+D + +A L +EM K+I P+ T
Sbjct: 320 MNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNIT 379
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAVMM 114
N+LI +C + + A+ + +MI + + Y++ L+ G CK + L M+
Sbjct: 380 CNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMI 439
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
++G P TY+ L+DG+ + ++ +L + G+ DV Y +I +CK++ VD
Sbjct: 440 EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVD 499
Query: 175 EALTLL-SLQK 184
A L S++K
Sbjct: 500 YAKVLFESMEK 510
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 97/184 (52%), Gaps = 7/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G S+ + +I + P++ + ++ S K +L + ++ +M+ ++ N+ +
Sbjct: 147 GMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVY 206
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG---KVLAV---MMK 115
N L++ G ++A LL EM K + P+ +T+N L+ CK+ + L+V M +
Sbjct: 207 NVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMER 266
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
GV PN+VTYNS + G+ G + +A + + + VT + YT +I+G C++ +DE
Sbjct: 267 SGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDE 325
Query: 176 ALTL 179
AL L
Sbjct: 326 ALRL 329
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
++S ++ + K +++D+ ++ ++ + + P++ L+ L + +M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 85 IMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ + N + +N+L+ K G K+L+ M ++GV P++ TYN+L+ YC
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+A + + M +SGV P++ Y I+G + + EA L
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF 296
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 100/181 (55%), Gaps = 6/181 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + + +L + VMPN Y+ ++ +FC + +S A+ L+ +ML + ++P+V ++
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
LI GFC G + A+ LLD+M+ K P+ ++ LL+ LC++ K+L M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G P++V YN+++ G+C A+ +L+ M +G +P+ Y +I GLC M DE
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 176 A 176
Sbjct: 349 G 349
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 6/190 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+ QL K+ + V+P+V Y +I FC+ V+ A +L +ML K +P+ ++ +L+
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLN 268
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
C L+EA LL M +K +P+ +N ++ G C+E KVL M+ G P
Sbjct: 269 SLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP 328
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
N V+Y +L+ G C G ++ K L M G +P ++ G C V+EA ++
Sbjct: 329 NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVV 388
Query: 181 SLQKWTAKTL 190
+ +TL
Sbjct: 389 EVVMKNGETL 398
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
GQ +++LL + K +P+ + Y+T++ S C+ + +A+ L M K P++ +
Sbjct: 239 GQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHY 298
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N++I GFC +A +LD+M+ PN+ ++ L+ GLC +G K L M+
Sbjct: 299 NTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMIS 358
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
+G P+ N L+ G+C G+V +A D++ + ++G T + ++I +C
Sbjct: 359 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 6/168 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q R + +LL +++ K P++V Y+T+I FC++ DA + +ML+ PN ++
Sbjct: 275 QLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYR 334
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQ 116
+LI G C G+ E L+EMI K P+ N L+ G C GK V+ V+MK
Sbjct: 335 TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 394
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII 164
G + T+ ++ C E K K L + +T D + V I
Sbjct: 395 GETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGI 442
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF-CIVGLLKEAISLLDE 83
+++ +I + + KL + +ML P N ++ G L++A L
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 84 MIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
+ + PN ++N+L+ C ++ M+++ V P+V +Y L+ G+C G+
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
VN A ++L+ M G PD YT ++N LC+ + EA LL
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + QLL +++ K P VV Y ++I K + +A+ L+ E +KRI NV +
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-LAVMMKQGVK- 119
+SLI GF VG + EA +L+E++ K + PN YT+N LLD L K ++ A++ Q +K
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 120 ----PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
PN VTY L++G C V + NKA M + G+ P YT +I+GL K + E
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 176 ALTLL 180
A L
Sbjct: 781 AGALF 785
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + + +IE + P+ V Y+++IG CK + +A +++ + R +P +
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-----MK 115
+N++I G+ G EA SLL+ K P+ +N +L L K GKV + MK
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ PN+ TYN L+D C G+++ A ++ +SM ++G+ P+V+ ++++ LCK + +DE
Sbjct: 371 KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 176 ALTLLS 181
A +
Sbjct: 431 ACAMFE 436
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+ +I FCK V+ A+ L EM K P V T+ S+I G + L EA L +E
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 86 MKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
K I+ N ++ L+DG K G+ +L +M++G+ PN+ T+NSL+D E+N
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+A SM + TP+ Y ++INGLCK++ ++A
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 97/182 (53%), Gaps = 6/182 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +I+ + +P+ YS +I K ++ ++L+ M + + + +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------K 115
N +I GFC G + +A LL+EM K +P T+ ++DGL K ++ M
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ ++ NVV Y+SL+DG+ VG +++A IL + Q G+TP++ + +++ L K + ++E
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 176 AL 177
AL
Sbjct: 711 AL 712
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N ++Y+++I +F D +Y +M+ + P++ N+ + G ++ ++
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLV 135
+E+ + P+A +++IL+ GL K G ++ M +QG + YN ++DG+C
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
G+VNKA +L M G P V Y +I+GL KI +DEA L K
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 9/183 (4%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+Q++RK + + P Y+T+IG+F L+ +M P V F +LI G
Sbjct: 156 VQMMRKFKFR---PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRG 212
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
F G + A+SLLDEM ++D + +N+ +D K GKV + G+KP+
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
VTY S++ C +++A ++ + ++ P Y +I G DEA +LL
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 182 LQK 184
Q+
Sbjct: 333 RQR 335
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 42/221 (19%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
MG+ +L++ +++ K PN+ Y+ +I C+ + AF+L M + PNV T
Sbjct: 356 MGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
N ++ C L EA ++ +EM K P+ TF L+DGL K G KV M+
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 115 KQGVKPNVVTYNSLM----------DGY-----------------------CL--VGEVN 139
+ N + Y SL+ DG+ C+ GE
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
K + + + PD + Y+++I+GL K +E L
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + +L ++ K + PN+ +++++ + K + +++A + M + PN T
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
+ LI G C V +A EM + + P+ ++ ++ GL K G +
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFK 789
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G P+ YN++++G A + + G+ + V+++ L K ++
Sbjct: 790 ANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLE 849
Query: 175 EALTLLSLQKWTAKT 189
+A + ++ + T K
Sbjct: 850 QAAIVGAVLRETGKA 864
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 107 bits (267), Expect = 6e-24, Method: Composition-based stats.
Identities = 58/188 (30%), Positives = 106/188 (56%), Gaps = 9/188 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-ILPNVFT 60
G + S++L + ++ + P+V+ +++++ K A DL+ EM + P+ +T
Sbjct: 152 GLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYT 211
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
FN+LI GFC ++ EA + +M + + +P+ T+N ++DGLC+ GK VL+ M+
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 115 KQG--VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
K+ V PNVV+Y +L+ GYC+ E+++A + + M G+ P+ Y +I GL +
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 173 VDEALTLL 180
DE +L
Sbjct: 332 YDEIKDIL 339
Score = 89.4 bits (220), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
++++I S+ L ++ L+ M I P+V TFNSL+ G A L DEM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 86 MK-NIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ P++YTFN L++G CK ++ M P+VVTYN+++DG C G+V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 139 NKAKDILNSMAQ--SGVTPDVQCYTVIINGLCKIKMVDEAL 177
A ++L+ M + + V P+V YT ++ G C + +DEA+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAV 301
Score = 88.6 bits (218), Expect = 3e-18, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 47/216 (21%)
Query: 11 LRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCI 70
+R+ G V P+ ++T+I FCK+ +V +AF ++ +M P+V T+N++I G C
Sbjct: 199 MRRTYG--VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCR 256
Query: 71 VGLLKEAISLLDEMIMKNID--PNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
G +K A ++L M+ K D PN ++ L+ G C + + V M+ +G+KPN
Sbjct: 257 AGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Query: 123 VTYNSLMDG-------------------------------------YCLVGEVNKAKDIL 145
VTYN+L+ G +C G ++ A +
Sbjct: 317 VTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 146 NSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
M + PD Y+V+I LC D A TL +
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFN 412
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-----LAVMMK 115
FNSLI + GL +E++ L M I P+ TFN LL L K G+ L M+
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 116 Q--GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+ GV P+ T+N+L++G+C V++A I M PDV Y II+GLC+ V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 174 DEALTLLS 181
A +LS
Sbjct: 261 KIAHNVLS 268
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL------ 55
G A++++ +++ + P+ YS +I + C A L++E+ K +L
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426
Query: 56 -PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNI-DPNAYTFNILLDGLCKEGK----- 108
P +N + C G K+A + +++ + + DP +Y L+ G C+EGK
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSY--KTLITGHCREGKFKPAY 484
Query: 109 -VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+L +M+++ P++ TY L+DG +GE A D L M +S P + ++ L
Sbjct: 485 ELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 544
Query: 168 CKIKMVDEALTLLSL 182
K K +E+ L++L
Sbjct: 545 AKRKFANESFCLVTL 559
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 106 bits (265), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 9/192 (4%)
Query: 2 GQTRASLQLLRKIEGKL-VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRI-LPNVF 59
G+ S +LL + L + PN +++ ++ CK+ ++ AF + EM I PN
Sbjct: 174 GEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSI 233
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKN-IDPNAYTFNILLDGLCKEG------KVLAV 112
T+++L+ KEA+ L ++MI K I P+ TFN++++G C+ G K+L
Sbjct: 234 TYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDF 293
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
M K G PNV Y++LM+G+C VG++ +AK + + ++G+ D YT ++N C+
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 173 VDEALTLLSLQK 184
DEA+ LL K
Sbjct: 354 TDEAMKLLGEMK 365
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 42/204 (20%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-ILPNVFTFNSLIYGFCIVGLLKEAIS 79
PN + YST++ +A +L+ +M++K I P+ TFN +I GFC G ++ A
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYC 133
+LD M +PN Y ++ L++G CK GK+ + K G+K + V Y +LM+ +C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 134 LVGEVNKAKDILNSMAQS-----------------------------------GVTPDVQ 158
GE ++A +L M S GV +
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKG 409
Query: 159 CYTVIINGLCKIKMVDEALTLLSL 182
Y +I+N LC +++A+ LS+
Sbjct: 410 SYRIILNALCCNGELEKAVKFLSV 433
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 91/186 (48%), Gaps = 6/186 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + + Q +++ + + V Y+T++ FC++ +A L EM A R + T
Sbjct: 316 VGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLT 375
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+N ++ G G +EA+ +LD+ + + N ++ I+L+ LC G K L+VM
Sbjct: 376 YNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMS 435
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
++G+ P+ T+N L+ C G +L + G+ P + + ++ +CK + +
Sbjct: 436 ERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLV 495
Query: 175 EALTLL 180
LL
Sbjct: 496 HVFELL 501
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PNV YS ++ FCK + +A + E+ + + + +L+ FC G EA+ L
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------KQGVKPNVVTYNSLMDGYCL 134
L EM + T+N++L GL EG+ + +GV N +Y +++ C
Sbjct: 361 LGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCC 420
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
GE+ KA L+ M++ G+ P + ++ LC+
Sbjct: 421 NGELEKAVKFLSVMSERGIWPHHATWNELVVRLCE 455
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 25/201 (12%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q R +R++ PNVV Y+ +I ++ K K VS A +L+ ML++ LPN+ T++
Sbjct: 536 QARKWFNEMREVG---CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 63 SLIYGFCIVGLLKEAISLLD-----------EMIMKNID-----PNAYTFNILLDGLCKE 106
+LI G C G +++A + + +M K D PN T+ LLDG CK
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 107 GKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCY 160
+V L M +G +PN + Y++L+DG C VG++++A+++ M++ G + Y
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 161 TVIINGLCKIKMVDEALTLLS 181
+ +I+ K+K D A +LS
Sbjct: 713 SSLIDRYFKVKRQDLASKVLS 733
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
++ +V Y+ ++ SFCK L+ A ++EM PNV T+ +LI+ + + A
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------------------LAVMMKQ---- 116
L + M+ + PN T++ L+DG CK G+V + + KQ
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 633
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+PNVVTY +L+DG+C V +A+ +L++M+ G P+ Y +I+GLCK+ +DEA
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++R++ G+ +P+ YS ++ C + AF L+ EM ++ +V+T+
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
++ FC GL+++A +EM PN T+ L+ K KV M+
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ----------------C 159
+G PN+VTY++L+DG+C G+V KA I M S PDV
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 641
Query: 160 YTVIINGLCKIKMVDEALTLL 180
Y +++G CK V+EA LL
Sbjct: 642 YGALLDGFCKSHRVEEARKLL 662
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PNVV Y ++ FCK V +A L M + PN +++LI G C VG L EA +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM YT++ L+D K KVL+ M++ PNVV Y ++DG C
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
VG+ ++A ++ M + G P+V YT +I+G I ++ L LL
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLE 803
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 96/192 (50%), Gaps = 12/192 (6%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFC--KDKLVSDAFDL----YSEMLAKRIL 55
G + +LL+K+ MP V+Y+ +IGS C KD L D DL YSEMLA ++
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445
Query: 56 PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------V 109
N +S C G ++A S++ EMI + P+ T++ +L+ LC K +
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505
Query: 110 LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
M + G+ +V TY ++D +C G + +A+ N M + G TP+V YT +I+ K
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 170 IKMVDEALTLLS 181
K V A L
Sbjct: 566 AKKVSYANELFE 577
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 8/179 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++L K+ PNVV+Y+ +I CK +A+ L M K PNV T+ ++I GF
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-----LAVMMKQGVKP-NV 122
++G ++ + LL+ M K + PN T+ +L+D CK G + L MKQ P +
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
Y +++G+ E ++ +L+ + Q P + Y ++I+ L K + ++ AL LL
Sbjct: 850 AGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ L+LL ++ K V PN V Y +I CK+ + A +L EM +
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-LAVMMKQGVK 119
+ +I GF + E++ LLDE+ + P + +L+D L K ++ +A+ + + V
Sbjct: 852 YRKVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA 909
Query: 120 PNVVT-------YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
T YNSL++ CL +V A + + M + GV P++Q + +I GL +
Sbjct: 910 TFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969
Query: 173 VDEALTLLSL 182
+ EAL LL
Sbjct: 970 ISEALLLLDF 979
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 50/231 (21%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ R +L L +E + +P+ V Y+ +I C+ L +A D + M A LPNV T
Sbjct: 283 VGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVT 339
Query: 61 -----------------------------------FNSLIYGFCIVGLLKEAISLLDEMI 85
FNSL++ +C G A LL +M+
Sbjct: 340 YSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Query: 86 MKNIDPNAYTFNILLDGLCKEG------------KVLAVMMKQGVKPNVVTYNSLMDGYC 133
P +NIL+ +C + K + M+ GV N + +S C
Sbjct: 400 KCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC 459
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
G+ KA ++ M G PD Y+ ++N LC ++ A L K
Sbjct: 460 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L+ L +++ P+ Y+ +I +F K + A ++ EM + + FT
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 273
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
Y C VG +EA++L++ +N P+ + L+ GLC+ L M
Sbjct: 274 RCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
PNVVTY++L+ G ++ + K +LN M G P + + +++ C
Sbjct: 331 TSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 29 IIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKN 88
++ C++ S A + + R P+ T+N LI F L A + EM + N
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265
Query: 89 IDPNAYTFNILLDGLCKEGK---VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDIL 145
+ + +T LCK GK L ++ + P+ V Y L+ G C +A D L
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325
Query: 146 NSMAQSGVTPDVQCYTVIING 166
N M + P+V Y+ ++ G
Sbjct: 326 NRMRATSCLPNVVTYSTLLCG 346
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 104/185 (56%), Gaps = 6/185 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+T +L++L+++ + + PN+ Y+T++ F + + A++ + EM + +V T+
Sbjct: 210 RTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYT 269
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ 116
++++GF + G +K A ++ DEMI + + P+ T+N ++ LCK+ V M+++
Sbjct: 270 TVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G +PNV TYN L+ G GE ++ ++++ M G P+ Q Y ++I + V++A
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 177 LTLLS 181
L L
Sbjct: 390 LGLFE 394
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 100/186 (53%), Gaps = 7/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +++L + ++ ++TI+ CK K V A++L+ L R + T+
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTY 198
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N ++ G+C++ +A+ +L EM+ + I+PN T+N +L G + G++ M K
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + +VVTY +++ G+ + GE+ +A+++ + M + GV P V Y +I LCK V+
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 176 ALTLLS 181
A+ +
Sbjct: 319 AVVMFE 324
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
GQ R + + +++ + +VV Y+T++ F + A +++ EM+ + +LP+V T+
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N++I C ++ A+ + +EM+ + +PN T+N+L+ GL G +++ M
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+G +PN TYN ++ Y EV KA + M P++ Y ++I+G+
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 43 FDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG 102
+ L M + RI P+ TF + + G +A+ L M + +FN +LD
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDV 170
Query: 103 LCKEGKV-----LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
LCK +V L ++ + VTYN +++G+CL+ KA ++L M + G+ P++
Sbjct: 171 LCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 158 QCYTVIINGLCKIKMVDEALTLL 180
Y ++ G + + A
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFF 253
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 106/185 (57%), Gaps = 7/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ A+ L+ +E K + PNVV Y+ ++ + C+ K + A ++SEML K + PN FT+
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--MMKQGVK 119
+ LI GF + A ++++M N + N +N +++GLCK G+ M++ +K
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582
Query: 120 P-----NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ +YNS++DG+ VG+ + A + M+++G +P+V +T +ING CK +D
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 175 EALTL 179
AL +
Sbjct: 643 LALEM 647
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 9/175 (5%)
Query: 11 LRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCI 70
++ +E KL +P Y +I FCK + A+ L+SE+ ++PNV +NSLI GF
Sbjct: 651 MKSMELKLDLP---AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRN 707
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVT 124
+G + AI L +M+ I + +T+ ++DGL K+G + + ++ G+ P+ +
Sbjct: 708 LGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEIL 767
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+ L++G G+ KA +L M + VTP+V Y+ +I G + ++EA L
Sbjct: 768 HMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 1 MGQTRASLQLLRK-IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVF 59
+GQT + ++L+ I+ K + Y++II F K A + Y EM PNV
Sbjct: 567 VGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV 626
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVM 113
TF SLI GFC + A+ + EM + + + L+DG CK+ + + +
Sbjct: 627 TFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL 686
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+ G+ PNV YNSL+ G+ +G+++ A D+ M G++ D+ YT +I+GL K +
Sbjct: 687 PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNI 746
Query: 174 DEALTLLS 181
+ A L S
Sbjct: 747 NLASDLYS 754
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 6/175 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G T ++++ R++ PNVV ++++I FCK + A ++ EM + + ++
Sbjct: 603 VGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA 662
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MM 114
+ +LI GFC +K A +L E+ + PN +N L+ G GK+ A M+
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
G+ ++ TY +++DG G +N A D+ + + G+ PD + V++NGL K
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 40/214 (18%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L L ++E + + P+ VM+S ++ FCK+ + A + Y M + RI P+ +++I
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 67 G----------------------------------FCIVGLLKEAISLLDEMIMKNIDPN 92
G FC G + A S L M K I+PN
Sbjct: 424 GCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 93 AYTFNILLDGLCK------EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILN 146
+N ++ C+ + + M+++G++PN TY+ L+DG+ + A D++N
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVIN 543
Query: 147 SMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
M S + Y IINGLCK+ +A +L
Sbjct: 544 QMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 98/210 (46%), Gaps = 40/210 (19%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +++++ ++ G + +V+ ++++ +CK + A DL++ M + + P+ F
Sbjct: 324 GNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMF 383
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG------------------- 102
+ ++ FC +++AI M I P++ + ++ G
Sbjct: 384 SVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFE 443
Query: 103 ---------------LCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKA 141
CK+GKV L +M ++G++PNVV YN++M +C + ++ A
Sbjct: 444 SWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLA 503
Query: 142 KDILNSMAQSGVTPDVQCYTVIINGLCKIK 171
+ I + M + G+ P+ Y+++I+G K K
Sbjct: 504 RSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 30/178 (16%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILP-NVFTF 61
+ ++++ R++ + P+ +++S + + CK + A DL EM K +P + T+
Sbjct: 254 KPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETY 313
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKPN 121
S+I F G ++EA+ ++DEM+ G G+ +
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMV----------------GF-------------GIPMS 344
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
V+ SL++GYC E+ KA D+ N M + G+ PD ++V++ CK +++A+
Sbjct: 345 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEF 402
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 41/216 (18%)
Query: 7 SLQLLRKIEGKLVMP-NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
+L LLR++ GKL +P + Y+++I +F K+ + +A + EM+ I +V SL+
Sbjct: 293 ALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLV 352
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK----EGKVLAVMMKQGVK-- 119
G+C L +A+ L + M + + P+ F+++++ CK E + M + V+
Sbjct: 353 NGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIA 412
Query: 120 PNVVTYNSLMDG----------------------------------YCLVGEVNKAKDIL 145
P+ V ++++ G +C G+V+ A L
Sbjct: 413 PSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFL 472
Query: 146 NSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
M Q G+ P+V Y ++ C++K +D A ++ S
Sbjct: 473 KMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ A++ L +K+ + ++ Y+T+I KD ++ A DLYSE+L I+P+
Sbjct: 708 LGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEIL 767
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
L+ G G +A +L+EM K++ PN ++ ++ G +EG ++ M+
Sbjct: 768 HMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEML 827
Query: 115 KQGVKPNVVTYNSLMDG 131
++G+ + +N L+ G
Sbjct: 828 EKGIVHDDTVFNLLVSG 844
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
+ V+P V + ++ S + L+ +A ++Y++M+ + + T L+ +E
Sbjct: 198 RKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEE 257
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-------MKQGVKPNVVTYNSLM 129
A+ + ++ + +P+ F++ + CK ++ + K GV + TY S++
Sbjct: 258 AVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVI 317
Query: 130 DGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ G + +A +++ M G+ V T ++NG CK + +AL L +
Sbjct: 318 VAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFN 369
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L L +++ + P++V YS +I CK A LY EM KRILPN T
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+L+ G C G+L EA SLLD +I + +NI++DG K G ++ V+++
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC---KIKM 172
G+ P+V T+NSL+ GYC + +A+ IL+ + G+ P V YT +++ K
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Query: 173 VDE 175
+DE
Sbjct: 557 IDE 559
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
LR E K + P+VV +++I+ +CK V A + +L ++P+V++ N LI G C
Sbjct: 209 FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 268
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVV 123
+VG + EA+ L +M ++P++ T+NIL G G +V+ M+ +G+ P+V+
Sbjct: 269 LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVI 328
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD--VQCYTVIINGLCKIKMVDEALTLLS 181
TY L+ G C +G ++ +L M G + + C +V+++GLCK +DEAL+L +
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC-SVMLSGLCKTGRIDEALSLFN 387
Query: 182 LQK 184
K
Sbjct: 388 QMK 390
Score = 93.2 bits (230), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
L R E ++P VM S + CK + +A L+++M A + P++ ++ +I+G C
Sbjct: 354 LSRGFELNSIIPCSVMLSGL----CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVV 123
+G A+ L DEM K I PN+ T LL GLC++G +L ++ G ++V
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQ 183
YN ++DGY G + +A ++ + ++G+TP V + +I G CK + + EA +L +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 184 K 184
K
Sbjct: 530 K 530
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 42/222 (18%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G +L+L + V P+ V Y+ + F ++S A+++ +ML K + P+V T
Sbjct: 270 VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVIT 329
Query: 61 F------------------------------NSLI------YGFCIVGLLKEAISLLDEM 84
+ NS+I G C G + EA+SL ++M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 85 IMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ P+ ++I++ GLCK GK + M + + PN T+ +L+ G C G +
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+A+ +L+S+ SG T D+ Y ++I+G K ++EAL L
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 96/180 (53%), Gaps = 13/180 (7%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
SL +L+K++ + + + Y++++ F + +D+Y E+ K N T+++++
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK----NEHTYSTVVD 195
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKP 120
G C L++A+ L K+I P+ +FN ++ G CK G V ++K G+ P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+V ++N L++G CLVG + +A ++ + M + GV PD Y ++ G + M+ A ++
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCK------------DKLVSDAFDLYSEM 49
G T++ +L R+++ + + P V YS I C+ +++ +M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 50 LAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV 109
++ I P+ T+N++I C V L A L+ M +N+D ++ T+NIL+D LC G +
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 110 ------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVI 163
+ + +Q V + Y +L+ +C+ G+ A + + + G ++ Y+ +
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731
Query: 164 INGLCKIKMVD 174
IN LC+ +++
Sbjct: 732 INRLCRRHLMN 742
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 54/217 (24%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
++V+Y+ +I + K + +A +L+ ++ I P+V TFNSLIYG+C + EA +L
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 82 D-----------------------------------EMIMKNIDPNAYTFNILLDGLCKE 106
D EM + I P T++++ GLC+
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 107 GKV------------------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
K L M +G+ P+ +TYN+++ C V ++ A L M
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 149 AQSGVTPDVQCYTVIINGLCKIKMVDEALTLL-SLQK 184
+ Y ++I+ LC + +A + + SLQ+
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE 683
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC-------IVGL 73
P+VV Y+T++ ++ +L EM A+ I P T++ + G C +
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595
Query: 74 LKEAI-----SLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNV 122
L+E I L +M + I P+ T+N ++ LC+ + L +M + + +
Sbjct: 596 LRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASS 655
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
TYN L+D C+ G + KA + S+ + V+ YT +I C
Sbjct: 656 ATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHC 701
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L L +++ + P++V YS +I CK A LY EM KRILPN T
Sbjct: 377 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 436
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+L+ G C G+L EA SLLD +I + +NI++DG K G ++ V+++
Sbjct: 437 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 496
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC---KIKM 172
G+ P+V T+NSL+ GYC + +A+ IL+ + G+ P V YT +++ K
Sbjct: 497 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Query: 173 VDE 175
+DE
Sbjct: 557 IDE 559
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
LR E K + P+VV +++I+ +CK V A + +L ++P+V++ N LI G C
Sbjct: 209 FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 268
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVV 123
+VG + EA+ L +M ++P++ T+NIL G G +V+ M+ +G+ P+V+
Sbjct: 269 LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVI 328
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD--VQCYTVIINGLCKIKMVDEALTLLS 181
TY L+ G C +G ++ +L M G + + C +V+++GLCK +DEAL+L +
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC-SVMLSGLCKTGRIDEALSLFN 387
Query: 182 LQK 184
K
Sbjct: 388 QMK 390
Score = 93.2 bits (230), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
L R E ++P VM S + CK + +A L+++M A + P++ ++ +I+G C
Sbjct: 354 LSRGFELNSIIPCSVMLSGL----CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVV 123
+G A+ L DEM K I PN+ T LL GLC++G +L ++ G ++V
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQ 183
YN ++DGY G + +A ++ + ++G+TP V + +I G CK + + EA +L +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 184 K 184
K
Sbjct: 530 K 530
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 42/222 (18%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G +L+L + V P+ V Y+ + F ++S A+++ +ML K + P+V T
Sbjct: 270 VGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVIT 329
Query: 61 F------------------------------NSLI------YGFCIVGLLKEAISLLDEM 84
+ NS+I G C G + EA+SL ++M
Sbjct: 330 YTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 85 IMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ P+ ++I++ GLCK GK + M + + PN T+ +L+ G C G +
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+A+ +L+S+ SG T D+ Y ++I+G K ++EAL L
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 96/180 (53%), Gaps = 13/180 (7%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
SL +L+K++ + + + Y++++ F + +D+Y E+ K N T+++++
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK----NEHTYSTVVD 195
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKP 120
G C L++A+ L K+I P+ +FN ++ G CK G V ++K G+ P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+V ++N L++G CLVG + +A ++ + M + GV PD Y ++ G + M+ A ++
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCK------------DKLVSDAFDLYSEM 49
G T++ +L R+++ + + P V YS I C+ +++ +M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 50 LAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC----- 104
++ I P+ T+N++I C V L A L+ M +N+D ++ T+NIL+D LC
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 105 -KEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVI 163
K + + +Q V + Y +L+ +C+ G+ A + + + G ++ Y+ +
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731
Query: 164 INGLCKIKMVD 174
IN LC+ +++
Sbjct: 732 INRLCRRHLMN 742
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 54/217 (24%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
++V+Y+ +I + K + +A +L+ ++ I P+V TFNSLIYG+C + EA +L
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 82 D-----------------------------------EMIMKNIDPNAYTFNILLDGLCKE 106
D EM + I P T++++ GLC+
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 107 GKV------------------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
K L M +G+ P+ +TYN+++ C V ++ A L M
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 149 AQSGVTPDVQCYTVIINGLCKIKMVDEALTLL-SLQK 184
+ Y ++I+ LC + +A + + SLQ+
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE 683
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 18/166 (10%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC-------IVGL 73
P+VV Y+T++ ++ +L EM A+ I P T++ + G C +
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHV 595
Query: 74 LKEAI-----SLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNV 122
L+E I L +M + I P+ T+N ++ LC+ + L +M + + +
Sbjct: 596 LRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASS 655
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
TYN L+D C+ G + KA + S+ + V+ YT +I C
Sbjct: 656 ATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHC 701
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 113/197 (57%), Gaps = 18/197 (9%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTII-------GSFCKDKLVSDAFDLYSEMLAKRI 54
G+ +LQ+ +K+ + PN++ +T++ SF +S A +++ +M+ +
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS----ISSAREVFDDMVKIGV 200
Query: 55 LPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMK-NIDPNAYTFNILLDGLCKEGKV---- 109
NV TFN L+ G+C+ G L++A+ +L+ M+ + ++P+ T+N +L + K+G++
Sbjct: 201 SLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLK 260
Query: 110 --LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
L M K G+ PN VTYN+L+ GYC +G + +A I+ M Q+ V PD+ Y ++INGL
Sbjct: 261 ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGL 320
Query: 168 CKIKMVDEALTLLSLQK 184
C + E L L+ K
Sbjct: 321 CNAGSMREGLELMDAMK 337
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G +L+++R++ K + N + +TI+ + CK++ + +A +L + + + + T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMK----- 115
+ +LI GF +++A+ + DEM I P TFN L+ GLC GK M K
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 116 -QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G+ P+ T+NS++ GYC G V KA + N + PD +++NGLCK M +
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 175 EALTLLS 181
+AL +
Sbjct: 609 KALNFFN 615
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 101/188 (53%), Gaps = 7/188 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G + + Q++ ++ V+P++ Y+ +I C + + +L M + ++ P+V T
Sbjct: 288 LGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVT 347
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMK----- 115
+N+LI G +GL EA L+++M + N T NI L LCKE K AV K
Sbjct: 348 YNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELV 407
Query: 116 --QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
G P++VTY++L+ Y VG+++ A +++ M Q G+ + I++ LCK + +
Sbjct: 408 DMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL 467
Query: 174 DEALTLLS 181
DEA LL+
Sbjct: 468 DEAHNLLN 475
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 101/175 (57%), Gaps = 7/175 (4%)
Query: 2 GQTRASLQLLRKIEGKL-VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G+ +L +L ++ + V P+ V Y+TI+ + K +SD +L +M ++PN T
Sbjct: 218 GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+N+L+YG+C +G LKEA +++ M N+ P+ T+NIL++GLC G +++ M
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
++P+VVTYN+L+DG +G +A+ ++ M GV + + + + LCK
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ +L++ +++ + P V ++++IG C A + + E+ +LP+ TFN
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-----MKQG 117
S+I G+C G +++A +E I + P+ YT NILL+GLCKEG + + +
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE 620
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
+ + VTYN+++ +C ++ +A D+L+ M + G+ PD Y I+ L + + E
Sbjct: 621 REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETD 680
Query: 178 TLLSLQKWTAK 188
L L+K++ K
Sbjct: 681 EL--LKKFSGK 689
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 84/164 (51%), Gaps = 7/164 (4%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
V Y T+I F +++ V A +++ EM +I P V TFNSLI G C G + A+ DE
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 84 MIMKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVVTYNSLMDGYCLVGE 137
+ + P+ TFN ++ G CKEG+V +K KP+ T N L++G C G
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
KA + N++ + D Y +I+ CK K + EA LLS
Sbjct: 607 TEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLS 649
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 91/176 (51%), Gaps = 10/176 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG---FCIVGLLKEA 77
P+ ++ + ++ + A ++ +M+ ++ PN+ T N+L+ G + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 78 ISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ-GVKPNVVTYNSLMD 130
+ D+M+ + N TFN+L++G C EGK+ L M+ + V P+ VTYN+++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWT 186
G ++ K++L M ++G+ P+ Y ++ G CK+ + EA ++ L K T
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 85/154 (55%), Gaps = 7/154 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+T +++ ++ ++P+ +++II +CK+ V AF+ Y+E + P+ +T
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTC 594
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N L+ G C G+ ++A++ + +I + + + T+N ++ CK+ K +L+ M +
Sbjct: 595 NILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMA 149
+G++P+ TYNS + G++++ ++L +
Sbjct: 654 KGLEPDRFTYNSFISLLMEDGKLSETDELLKKFS 687
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G T+ + ++ +E + +P+ V +++++ + V A YS M+ I PNV T
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVAT 750
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
+N++I G GL+KE L EM + + P+ +T+N L+ G K G + M+
Sbjct: 751 YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI 810
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G+ P TYN L+ + VG++ +A+++L M + GV+P+ Y +I+GLCK+
Sbjct: 811 ADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHP 870
Query: 175 EALTLLSLQKWTAKTLFLIQ 194
+ +W K ++L +
Sbjct: 871 DV-------EWNKKAMYLAE 883
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 38/197 (19%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDL-YSEMLAKRILPNVFTFNSLIYGFCIVGLLKEA 77
V+P+ +++++I F + LV D L YS+M+A + P+VF N LI+ FC VG L A
Sbjct: 89 VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 148
Query: 78 ISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDG 131
ISLL + I + T+N ++ GLC+ G + L+ M+K G+ P+ V+YN+L+DG
Sbjct: 149 ISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG 205
Query: 132 YCLVGEVNKAKDILNSMAQ----------------------------SGVTPDVQCYTVI 163
+C VG +AK +++ +++ SG PDV ++ I
Sbjct: 206 FCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSI 265
Query: 164 INGLCKIKMVDEALTLL 180
IN LCK V E LL
Sbjct: 266 INRLCKGGKVLEGGLLL 282
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 93/166 (56%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+VV +S+II CK V + L EM + PN T+ +L+ + + A++L
Sbjct: 257 PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALAL 316
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
+M+++ I + + +L+DGL K G K ++++ PNVVTY +L+DG C
Sbjct: 317 YSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCK 376
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G+++ A+ I+ M + V P+V Y+ +ING K M++EA++LL
Sbjct: 377 AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 6/176 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
LLR++E V PN V Y+T++ S K + A LYS+M+ + I ++ + L+ G
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVV 123
G L+EA ++ N PN T+ L+DGLCK G ++ M+++ V PNVV
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
TY+S+++GY G + +A +L M V P+ Y +I+GL K + A+ L
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 92/152 (60%), Gaps = 6/152 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+PNVV Y+ ++ CK +S A + ++ML K ++PNV T++S+I G+ G+L+EA+S
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVS 420
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGK-VLAVMMKQ-----GVKPNVVTYNSLMDGYC 133
LL +M +N+ PN +T+ ++DGL K GK +A+ + + GV+ N ++L++
Sbjct: 421 LLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLK 480
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
+G + + K ++ M GVT D YT +I+
Sbjct: 481 RIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 37/210 (17%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ ++ LLR +++ + V Y+T+I C+ L +A+ SEM+ ILP+ +
Sbjct: 142 VGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVS 198
Query: 61 FNSLIYGFCIVGLLKEAISLLDE----------------------------MIMKNIDPN 92
+N+LI GFC VG A +L+DE M+M DP+
Sbjct: 199 YNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPD 258
Query: 93 AYTFNILLDGLCKEGKVLA------VMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILN 146
TF+ +++ LCK GKVL M + V PN VTY +L+D A + +
Sbjct: 259 VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 318
Query: 147 SMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
M G+ D+ YTV+++GL K + EA
Sbjct: 319 QMVVRGIPVDLVVYTVLMDGLFKAGDLREA 348
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++ +L ++ + PN+ Y + + K K F + +L+ I + +
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG------LCKEGKVLAVMMK 115
N+LI C +G+ K+A ++ +M + P+ TFN L+ G + K +VMM+
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G+ PNV TYN+++ G G + + L+ M G+ PD Y +I+G KI +
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKG 801
Query: 176 ALTL 179
++T+
Sbjct: 802 SMTI 805
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 6/163 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K V+PNVV YS++I + K ++ +A L +M + ++PN FT+ ++I G G +
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMD 130
AI L EM + ++ N Y + L++ L + G++ V M+ +GV + + Y SL+D
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+ G+ A M + G+ DV Y V+I+G+ K V
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV 555
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Query: 47 SEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL-DEMIMKNIDPNAYTFNILLDGLCK 105
S M ++P+ +NSLI+ F + GL+ + +SL+ +MI + P+ + N+L+ CK
Sbjct: 82 SAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCK 141
Query: 106 EGKV---LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTV 162
G++ ++++ + + + VTYN+++ G C G ++A L+ M + G+ PD Y
Sbjct: 142 VGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNT 201
Query: 163 IINGLCKI 170
+I+G CK+
Sbjct: 202 LIDGFCKV 209
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 41/209 (19%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K + P++ ++ ++ S K L+ +M + I P++ + N ++ C G ++E
Sbjct: 567 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 626
Query: 77 AISLLDEMIMKNIDPNAYTFNILLD----------------------------------- 101
AI +L++M++ I PN T+ I LD
Sbjct: 627 AIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIA 686
Query: 102 GLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTP 155
LCK G V+ M +G P+ VT+NSLM GY + V KA + M ++G++P
Sbjct: 687 TLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISP 746
Query: 156 DVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+V Y II GL ++ E LS K
Sbjct: 747 NVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G ++ LLRK+E + V+PN Y T+I K A +L EM + N +
Sbjct: 413 GMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYIL 472
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
++L+ +G +KE L+ +M+ K + + + L+D K G M +
Sbjct: 473 DALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQE 532
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
+G+ +VV+YN L+ G G+V A M + G+ PD+ + +++N
Sbjct: 533 RGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMN 581
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P+VV Y+++IG C++ + A L +M+ KRI PN TF L+ G C G EA
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGY 132
L+ +M + P + IL+ L K G++ L M K+ +KP+VV YN L++
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C V +A +L M G P+ Y ++I+G C+I+ D L +L+
Sbjct: 337 CTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLN 385
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN V ++ +I F A ++ EML + P+V T+NSLI C + +A SL
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSL 243
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
L++MI K I PNA TF +L+ GLC +G K++ M +G KP +V Y LM
Sbjct: 244 LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G +++AK +L M + + PDV Y +++N LC V EA +L+
Sbjct: 304 RGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLT 350
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 43 FDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG 102
FD +M R+ PN +FN LI GF + A + DEM+ + P+ T+N L+
Sbjct: 174 FDGAKDM---RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGF 230
Query: 103 LCKE---GK---VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD 156
LC+ GK +L M+K+ ++PN VT+ LM G C GE N+AK ++ M G P
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 157 VQCYTVIINGLCKIKMVDEALTLLSLQK 184
+ Y ++++ L K +DEA LL K
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMK 318
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
Q+LR + + V ++ +I + K V A D++ ++ + + + + N+LI
Sbjct: 102 QILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVL 161
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMKQGVKPNV 122
G L++A S D + PN+ +FNIL+ G + KV M++ V+P+V
Sbjct: 162 VDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV 221
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
VTYNSL+ C ++ KAK +L M + + P+ + +++ GLC +EA L+
Sbjct: 222 VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLM 279
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 6/173 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L+ +E + P +V Y ++ K + +A L EM +RI P+V +
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIY 329
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK-----EG-KVLAVMMK 115
N L+ C + EA +L EM MK PNA T+ +++DG C+ G VL M+
Sbjct: 330 NILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLA 389
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
P T+ ++ G G ++ A +L M + ++ + +++ LC
Sbjct: 390 SRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 98/177 (55%), Gaps = 7/177 (3%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEM-LAKRILPNVFTFNSLIYGFCI 70
R +G ++ + + ++T+I CK + +A +L M L +R +PN T+N LI G+C
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCR 418
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE-GKVLAV-----MMKQGVKPNVVT 124
G L+ A ++ M I PN T N ++ G+C+ G +AV M K+GVK NVVT
Sbjct: 419 AGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
Y +L+ C V V KA M ++G +PD + Y +I+GLC+++ +A+ ++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 98/181 (54%), Gaps = 13/181 (7%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR------ILPNVFTFNS 63
L+ K++ + P+VV +I + CK + V +A +++ +M KR I + FN+
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 64 LIYGFCIVGLLKEAISLLDEM-IMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQ 116
LI G C VG LKEA LL M + + PNA T+N L+DG C+ GK V++ M +
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+KPNVVT N+++ G C +N A M + GV +V Y +I+ C + V++A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 177 L 177
+
Sbjct: 496 M 496
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 48/210 (22%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-------------- 53
+ L+ + V PN V + I S CK+ + A+D+ S+++ +
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 54 ---------------------ILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNID-- 90
I P+V T LI C + EA+ + ++M K D
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 91 ----PNAYTFNILLDGLCKEGKV-----LAVMMK--QGVKPNVVTYNSLMDGYCLVGEVN 139
++ FN L+DGLCK G++ L V MK + PN VTYN L+DGYC G++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
AK++++ M + + P+V I+ G+C+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +++ +++ + PNVV +TI+G C+ ++ A + +M + + NV T+
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC---------------KE 106
+LI+ C V +++A+ ++M+ P+A + L+ GLC KE
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 107 G--------------------------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
G ++L M K+G KP+ +TYN+L+ + +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFES 599
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ ++ M + G+ P V Y +I+ C + +DEAL L
Sbjct: 600 VERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ +Y +I C+ + DA + ++ ++ +N LI FC ++ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 81 LDEMIMKNIDPNAYTFNILLD--GLCKEGKVLAVMMKQ----GVKPNVVTYNSLMDGYCL 134
L +M + P++ T+N L+ G K+ + + MM+Q G+ P V TY +++D YC
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 135 VGEVNKAKDILNSMA-QSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
VGE+++A + M S V P+ Y ++IN K+ +AL+L
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL--PNV 58
MG S+ + +++ M N + + ++ ++ LV DAF + EML K + PN
Sbjct: 165 MGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNR 222
Query: 59 FTFNSLIYGFCIVGLLKEA--ISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VL 110
T + +++ LL E I+L+ + PN+ + LCK + +L
Sbjct: 223 ITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDIL 282
Query: 111 AVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
+ +MK +N+L+ ++++ D++ M + + PDV ++IN LCK
Sbjct: 283 SDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKS 342
Query: 171 KMVDEALTLLS 181
+ VDEAL +
Sbjct: 343 RRVDEALEVFE 353
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++L +E + P+ + Y+T+I F K K + +M + P V T+ ++I +
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 69 CIVGLLKEAISLLDEM-IMKNIDPNAYTFNILLDGLCKEGKV-LAVMMKQG-----VKPN 121
C VG L EA+ L +M + ++PN +NIL++ K G A+ +K+ V+PN
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 122 VVTYNSL 128
V TYN+L
Sbjct: 687 VETYNAL 693
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+++ Y+ +IG FC +++ ++M + P+ T+N+LI F + ++
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-------MKQGVKPNVVTYNSLMDGYCL 134
++M +DP T+ ++D C G++ + + V PN V YN L++ +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVII-------NGLCKIKMVDEALTLL 180
+G +A + M V P+V+ Y + G +K++DE + L
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHL 717
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 103 bits (257), Expect = 7e-23, Method: Composition-based stats.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 41/218 (18%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G L + RK++ + P + Y+ ++ V A ++ M + RI P++ T
Sbjct: 200 LGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVT 259
Query: 61 FNSLIYGFCIVGLLKEA-----------------------------------ISLLDEMI 85
+N++I G+C G ++A ++L EM
Sbjct: 260 YNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMD 319
Query: 86 MKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
K I + F++++ GLCKEGK V M+++G KPNV Y L+DGY G V
Sbjct: 320 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 379
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
A +L+ M G PDV Y+V++NGLCK V+EAL
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Score = 99.8 bits (247), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 6/161 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
+S +IG CK+ +++ + ++ M+ K PNV + LI G+ G +++AI LL MI
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 86 MKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ P+ T++++++GLCK G+V + G+ N + Y+SL+DG G V+
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+A+ + M++ G T D CY +I+ K + VDEA+ L
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Score = 94.0 bits (232), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
GQT+ +++ LR +E + + + Y T+I + D LY EM K I F
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
+ +I G C G L E ++ + MI K PN + +L+DG K G V L M+
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G KP+VVTY+ +++G C G V +A D ++ G+ + Y+ +I+GL K VDE
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 176 ALTLL 180
A L
Sbjct: 451 AERLF 455
Score = 80.5 bits (197), Expect = 6e-16, Method: Composition-based stats.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 43/220 (19%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFD----------------- 44
G +++LL ++ + P+VV YS ++ CK+ V +A D
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 45 ------------------LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIM 86
L+ EM K + + +N+LI F + EAI+L M
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Query: 87 KN-IDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ D YT+ ILL G+ KE K+ +M+ +G+ P + +L G CL G+V
Sbjct: 496 EEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVA 555
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+A IL+ +A GV D C +IN LCK + EA L
Sbjct: 556 RACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKL 594
Score = 67.8 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMK 115
N+LI F +G+++E + + +M I+P YT+N L++GL +V VM
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
+KP++VTYN+++ GYC G+ KA + L M G D Y +I
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQA 301
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 6/170 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K PNVV YST I +FCK + A + M + PNV TF LI G+C G L+
Sbjct: 157 KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEV 216
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMD 130
A+SL EM + N T+ L+DG CK+G ++ + M++ V+PN + Y +++D
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G+ G+ + A L M G+ D+ Y VII+GLC + EA ++
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 104/189 (55%), Gaps = 10/189 (5%)
Query: 2 GQTRAS---LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNV 58
G R++ L+ LR G + P++V ++++ F K K++ + F +Y ++ K PNV
Sbjct: 105 GDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNV 163
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-LAVMMKQG 117
T+++ I FC G L+ A+ M + PN TF L+DG CK G + +AV + +
Sbjct: 164 VTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 118 VKP-----NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
++ NVVTY +L+DG+C GE+ +A+++ + M + V P+ YT II+G +
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 173 VDEALTLLS 181
D A+ L+
Sbjct: 284 SDNAMKFLA 292
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 98/184 (53%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L+ ++ + PNVV ++ +I +CK + A LY EM R+ NV T+
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+LI GFC G ++ A + M+ ++PN+ + ++DG + G K LA M+
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
QG++ ++ Y ++ G C G++ +A +I+ M +S + PD+ +T ++N K +
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 176 ALTL 179
A+ +
Sbjct: 357 AVNM 360
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL---PN 57
+GQ + + ++ + P+V+ Y+++I C++ + A + + A P+
Sbjct: 69 LGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPD 128
Query: 58 VFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLA 111
+ +FNSL GF + +L E + M +K PN T++ +D CK G K
Sbjct: 129 IVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLALKSFH 187
Query: 112 VMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIK 171
M + + PNVVT+ L+DGYC G++ A + M + ++ +V YT +I+G CK
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247
Query: 172 MVDEALTLLS 181
+ A + S
Sbjct: 248 EMQRAEEMYS 257
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 8/181 (4%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
SL+ L + + P+ +++++ CK V A D+ M P+V ++NSLI
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 67 GFCIVGLLKEAISLLDEMIMKN---IDPNAYTFNILLDGLCKEGKVLAVMMKQGV----- 118
G C G ++ A +L+ + + P+ +FN L +G K + V + GV
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCC 159
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
PNVVTY++ +D +C GE+ A +SM + ++P+V +T +I+G CK ++ A++
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 179 L 179
L
Sbjct: 220 L 220
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +++ L K+ + + ++ Y II C + + +A ++ +M ++P++ F
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQGV-KP 120
+++ + G +K A+++ ++I + +P+ + ++DG+ K G++ ++ + K
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKA 401
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC-----------K 169
N V Y L+D C G+ + + + + ++++G+ PD YT I GLC K
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 170 IKMVDEALTLLSLQKWT 186
+MV E L LL L +T
Sbjct: 462 TRMVQEGL-LLDLLAYT 477
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 38 LVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFN 97
+V +A S + LP+ FT N I+ ++ L ++ + P+ +FN
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 98 ILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQS 151
++ +CK G+V + M + G +P+V++YNSL+DG+C G++ A +L S+ S
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 152 G---VTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
PD+ + + NG K+KM+DE + +
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGV 154
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + +++ +E ++P++V+++T++ ++ K + A ++Y +++ + P+V
Sbjct: 317 GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+++I G G L EAI I K N + +L+D LCKEG + V + +
Sbjct: 377 STMIDGIAKNGQLHEAIVYF--CIEK---ANDVMYTVLIDALCKEGDFIEVERLFSKISE 431
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G+ P+ Y S + G C G + A + M Q G+ D+ YT +I GL ++ E
Sbjct: 432 AGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVE 491
Query: 176 A 176
A
Sbjct: 492 A 492
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+L KI ++P+ MY++ I CK + DAF L + M+ + +L ++ + +LIYG
Sbjct: 424 RLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGL 483
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV 112
GL+ EA + DEM+ I P++ F++L+ KEG + A
Sbjct: 484 ASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N VMY+ +I + CK+ + L+S++ ++P+ F + S I G C G L +A L
Sbjct: 402 NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK 461
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLV 135
M+ + + + + L+ GL +G +V M+ G+ P+ ++ L+ Y
Sbjct: 462 TRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKE 521
Query: 136 GEVNKAKDILNSMAQSGVTPDVQ 158
G + A D+L M + G+ V
Sbjct: 522 GNMAAASDLLLDMQRRGLVTAVS 544
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 98/177 (55%), Gaps = 7/177 (3%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEM-LAKRILPNVFTFNSLIYGFCI 70
R +G ++ + + ++T+I CK + +A +L M L +R +PN T+N LI G+C
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCR 418
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE-GKVLAV-----MMKQGVKPNVVT 124
G L+ A ++ M I PN T N ++ G+C+ G +AV M K+GVK NVVT
Sbjct: 419 AGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
Y +L+ C V V KA M ++G +PD + Y +I+GLC+++ +A+ ++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 98/181 (54%), Gaps = 13/181 (7%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR------ILPNVFTFNS 63
L+ K++ + P+VV +I + CK + V +A +++ +M KR I + FN+
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 64 LIYGFCIVGLLKEAISLLDEM-IMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQ 116
LI G C VG LKEA LL M + + PNA T+N L+DG C+ GK V++ M +
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+KPNVVT N+++ G C +N A M + GV +V Y +I+ C + V++A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 177 L 177
+
Sbjct: 496 M 496
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 48/210 (22%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-------------- 53
+ L+ + V PN V + I S CK+ + A+D+ S+++ +
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 54 ---------------------ILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNID-- 90
I P+V T LI C + EA+ + ++M K D
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDG 363
Query: 91 ----PNAYTFNILLDGLCKEGKV-----LAVMMK--QGVKPNVVTYNSLMDGYCLVGEVN 139
++ FN L+DGLCK G++ L V MK + PN VTYN L+DGYC G++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
AK++++ M + + P+V I+ G+C+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +++ +++ + PNVV +TI+G C+ ++ A + +M + + NV T+
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC---------------KE 106
+LI+ C V +++A+ ++M+ P+A + L+ GLC KE
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 107 G--------------------------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
G ++L M K+G KP+ +TYN+L+ + +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFES 599
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ ++ M + G+ P V Y +I+ C + +DEAL L
Sbjct: 600 VERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ +Y +I C+ + DA + ++ ++ +N LI FC ++ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 81 LDEMIMKNIDPNAYTFNILLD--GLCKEGKVLAVMMKQ----GVKPNVVTYNSLMDGYCL 134
L +M + P++ T+N L+ G K+ + + MM+Q G+ P V TY +++D YC
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 135 VGEVNKAKDILNSMA-QSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
VGE+++A + M S V P+ Y ++IN K+ +AL+L
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEM-LAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
P V Y +I ++C + +A L+ +M L ++ PN +N LI F +G +A+S
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYC 133
L +EM MK + PN T+N L L ++ K++ M++Q +PN +T LM+
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVI 163
E+ K + + + + T + V
Sbjct: 734 GSDELVKLRKFMQGYSVASPTEKASPFDVF 763
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++L +E + P+ + Y+T+I F K K + +M + P V T+ ++I +
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 69 CIVGLLKEAISLLDEM-IMKNIDPNAYTFNILLDGLCKEGKV-LAVMMKQG-----VKPN 121
C VG L EA+ L +M + ++PN +NIL++ K G A+ +K+ V+PN
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 122 VVTYNSL 128
V TYN+L
Sbjct: 687 VETYNAL 693
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL--PNV 58
MG S+ + +++ M N + + ++ ++ LV DAF + EML K + PN
Sbjct: 165 MGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNR 222
Query: 59 FTFNSLIYGFCIVGLLKEA--ISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VL 110
T + +++ LL E I+L+ + PN+ + LCK + +L
Sbjct: 223 ITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDIL 282
Query: 111 AVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
+ +MK +N+L+ ++++ D++ M + + PDV ++IN LCK
Sbjct: 283 SDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKS 342
Query: 171 KMVDEALTLLS 181
+ VDEAL +
Sbjct: 343 RRVDEALEVFE 353
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+++ Y+ +IG FC +++ ++M + P+ T+N+LI F + ++
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-------MKQGVKPNVVTYNSLMDGYCL 134
++M +DP T+ ++D C G++ + + V PN V YN L++ +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVII-------NGLCKIKMVDE 175
+G +A + M V P+V+ Y + G +K++DE
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V PN V+Y+ +I +F K A L EM K + PNV T+N+L + +
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLL 707
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
L+DEM+ ++ +PN T IL++ L + +V M GY +
Sbjct: 708 KLMDEMVEQSCEPNQITMEILMERLSGSDE-------------LVKLRKFMQGYSVASPT 754
Query: 139 NKA 141
KA
Sbjct: 755 EKA 757
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G SL LL + K P+V++ + +I F + + A + E+L K P+VF +
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAY 161
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+LI GFC + + +A +LD M K+ P+ T+NI++ LC G KVL ++
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+P V+TY L++ L G V++A +++ M G+ PD+ Y II G+CK MVD
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 176 ALTLL 180
A ++
Sbjct: 282 AFEMV 286
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L+ K+ + PNVV YS +I + C+D + +A +L M K + P+ +++
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
+ LI FC G L AI L+ MI P+ +N +L LCK GK + + +
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G PN +YN++ G+ +A ++ M +G+ PD Y +I+ LC+ MVDE
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Query: 176 ALTLL 180
A LL
Sbjct: 492 AFELL 496
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 103/190 (54%), Gaps = 6/190 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
M + + ++L ++ K P+ V Y+ +IGS C + A + +++L+ P V T
Sbjct: 171 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 230
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
+ LI + G + EA+ L+DEM+ + + P+ +T+N ++ G+CKEG V + +
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 290
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+G +P+V++YN L+ G+ + + ++ M P+V Y+++I LC+ ++
Sbjct: 291 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 175 EALTLLSLQK 184
EA+ LL L K
Sbjct: 351 EAMNLLKLMK 360
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 6/171 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K P+V Y+ +I FCK + DA + M +K P+ T+N +I C G L
Sbjct: 152 KFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMD 130
A+ +L++++ N P T+ IL++ EG K++ M+ +G+KP++ TYN+++
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G C G V++A +++ ++ G PDV Y +++ L +E L++
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +++R +E K P+V+ Y+ ++ + + L ++M +++ PNV T+
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
+ LI C G ++EA++LL M K + P+AY+++ L+ C+EG++ L M+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
G P++V YN+++ C G+ ++A +I + + G +P+ Y + + L
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +++ L + +P++V Y+T++ + CK+ A +++ ++ PN ++
Sbjct: 382 GRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N++ G A+ ++ EM+ IDP+ T+N ++ LC+EG ++L M
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
P+VVTYN ++ G+C + A ++L SM +G P+ YTV+I G+ E
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Query: 176 ALTL 179
A+ L
Sbjct: 562 AMEL 565
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L++ K+ PN Y+T+ + A + EM++ I P+ T+
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITY 476
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
NS+I C G++ EA LL +M P+ T+NI+L G CK + VL M+
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQ 150
G +PN TY L++G G +A ++ N + +
Sbjct: 537 NGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 64 LIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG------LCKEGKVLAVMMKQG 117
+ + C G E++ LL+ M+ K +P+ L+ G + K +V+ ++ K G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
+P+V YN+L++G+C + ++ A +L+ M +PD Y ++I LC +D AL
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 178 TLLS 181
+L+
Sbjct: 214 KVLN 217
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G ++ ++E +P+ + +S +I + + + S+A + + L R P+V +
Sbjct: 200 GLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVY 258
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
+L+ G+C G + EA + EM + I+PN YT++I++D LC+ G+ V A M+
Sbjct: 259 TNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD 318
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G PN +T+N+LM + G K + N M + G PD Y +I C+ + ++
Sbjct: 319 SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLEN 378
Query: 176 ALTLLS 181
A+ +L+
Sbjct: 379 AVKVLN 384
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V++Y+ ++ +C+ +S+A ++ EM I PNV+T++ +I C G + A +
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG---KVLAV---MMKQGVKPNVVTYNSLMDGYCL 134
+M+ PNA TFN L+ K G KVL V M K G +P+ +TYN L++ +C
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ A +LN+M + + + I + K + V+ A + S
Sbjct: 373 DENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 419
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++ ++++ + PNV YS +I + C+ +S A D++++ML PN TF
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+L+ G ++ + + ++M +P+ T+N L++ C++ KVL M+K
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + N T+N++ +VN A + + M ++ P+ Y +++ K D
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 176 ALTL 179
L +
Sbjct: 449 VLKM 452
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 42 AFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD 101
A+ L M ++ + ++ TF LI + GL EA+ + M P+ F+I++
Sbjct: 170 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 229
Query: 102 GLCK-----EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD 156
L + E + +K +P+V+ Y +L+ G+C GE+++A+ + M +G+ P+
Sbjct: 230 NLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPN 289
Query: 157 VQCYTVIINGLCKIKMVDEA 176
V Y+++I+ LC+ + A
Sbjct: 290 VYTYSIVIDALCRCGQISRA 309
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 11/172 (6%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+ L+ ++ + V ++ ++ +I + + L S+A ++ M +P+ F+ +I
Sbjct: 170 AWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVIS 229
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
EA S D + +P+ + L+ G C+ G KV M G++P
Sbjct: 230 NLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
NV TY+ ++D C G++++A D+ M SG P+ + N L ++ +
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNA----ITFNNLMRVHV 336
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+T LQ+ +++ P+ + Y+ +I + C+D+ + +A + + M+ K+ N TF
Sbjct: 339 GRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTF 398
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL--CKEGKVLAVMMKQ--- 116
N++ + A + +M+ +PN T+NIL+ K ++ M K+
Sbjct: 399 NTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDD 458
Query: 117 -GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG-VTPDVQCYTVIINGL 167
V+PNV TY L+ +C +G N A + M + +TP + Y +++ L
Sbjct: 459 KEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQL 511
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++ L + K ++PN + Y+ +I ++CK K A L +M + P++ T+
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
LI+G + G + +A+++ ++I + + P+A +N+L+ GLCK G+ L M+
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ + P+ Y +L+DG+ G+ ++A+ + + + GV DV + +I G C+ M+DE
Sbjct: 479 RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Query: 176 ALTLLS 181
AL ++
Sbjct: 539 ALACMN 544
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 41/219 (18%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L+ GK +PN+V Y+TIIG +CK + +A+ ++ E+ K +P + TF
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278
Query: 62 NSLIYGFCIVGLLKEAISLLDE-----------------------------------MIM 86
++I GFC G + LL E +I
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIA 338
Query: 87 KNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
+ P+ T+NIL++ LCKEGK L K+G+ PN ++Y L+ YC E +
Sbjct: 339 NDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDI 398
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
A +L MA+ G PD+ Y ++I+GL +D+A+ +
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 88/157 (56%), Gaps = 6/157 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
++P+ +Y+T+I F + +A ++S + K + +V N++I GFC G+L EA+
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
+ ++ M +++ P+ +T++ ++DG K+ K+ M K KPNVVTY SL++G+
Sbjct: 541 ACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
C G+ A++ M + P+V YT +I L K
Sbjct: 601 CCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V Y+ +I CK+ A E K ++PN ++ LI +C A L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVL-AVMMK-----QGVKPNVVTYNSLMDGYCL 134
L +M + P+ T+ IL+ GL G + AV MK +GV P+ YN LM G C
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQ 183
G AK + + M + PD Y +I+G + DEA + SL
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLS 511
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L + ++ + ++P+ YSTII + K + ++ A ++ M + PNV T+
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL-------AVMM 114
SLI GFC G K A EM ++++ PN T+ L+ L KE L +MM
Sbjct: 594 TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMM 653
Query: 115 KQGVKPNVVTYNSLMDGY 132
PN VT+N L+ G+
Sbjct: 654 TNKCVPNEVTFNCLLQGF 671
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++++ R +E PNVV Y+++I FC A + + EM + ++PNV T+ +LI
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIR 633
Query: 67 GFCI-VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE--GKVLA------------ 111
L++A+ + M+ PN TFN LL G K+ GKVLA
Sbjct: 634 SLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSL 693
Query: 112 ------VMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
M G + YNS + C+ G V A + M + G +PD + I++
Sbjct: 694 FSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILH 753
Query: 166 GLC 168
G C
Sbjct: 754 GFC 756
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 6 ASLQLLRKIE---GKLVMPNVVMY----STIIGSFCKDKLVSDAFDLYSEMLA-KRILPN 57
A ++ +IE G L NV + S ++ ++ + +S A ++Y ++ +P+
Sbjct: 110 ARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPD 169
Query: 58 VFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LA 111
V NSL+ L +A + DEM + + Y+ IL+ G+C EGKV +
Sbjct: 170 VIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIE 229
Query: 112 VMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+G PN+V YN+++ GYC +G++ A + + G P ++ + +ING CK
Sbjct: 230 GRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 26 YST--IIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
YST ++ C + V L K +PN+ +N++I G+C +G ++ A + E
Sbjct: 206 YSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKE 265
Query: 84 MIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
+ +K P TF +++G CKEG ++L+ + ++G++ +V N+++D G
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY 325
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+ + + + PDV Y ++IN LCK
Sbjct: 326 KVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K V +VV ++ +I FC+ ++ +A + M + ++P+ FT++++I G+ +
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLM 129
AI + M PN T+ L++G C +G + M + + PNVVTY +L+
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSE-MLAKRILPNVFT 60
G + + + ++++ + ++PNVV Y+T+I S K+ + Y E M+ + +PN T
Sbjct: 604 GDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVT 663
Query: 61 FNSLIYGFCIV----------GLLKEAISLLDEMIMK----NIDPNAYTFNILLDGLCKE 106
FN L+ GF G SL E + +A +N L LC
Sbjct: 664 FNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVH 723
Query: 107 GKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDI-LNSMAQSGVTPDVQC 159
G V M+K+G P+ V++ +++ G+C+VG + +++ ++ + G+ V+
Sbjct: 724 GMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVR- 782
Query: 160 YTVIINGLCKIKMVDEALTLLS 181
Y+ ++ ++ EA T+L
Sbjct: 783 YSQVLEQHLPQPVICEASTILH 804
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 97/177 (54%), Gaps = 7/177 (3%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEM-LAKRILPNVFTFNSLIYGFCI 70
R +G ++ + + ++T+I CK + +A +L M L +R PN T+N LI G+C
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCR 418
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE-GKVLAV-----MMKQGVKPNVVT 124
G L+ A ++ M I PN T N ++ G+C+ G +AV M K+GVK NVVT
Sbjct: 419 AGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
Y +L+ C V V KA M ++G +PD + Y +I+GLC+++ +A+ ++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 98/181 (54%), Gaps = 13/181 (7%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR------ILPNVFTFNS 63
L+ K++ + P+VV +I + CK + V +A +++ +M KR I + FN+
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNT 375
Query: 64 LIYGFCIVGLLKEAISLLDEM-IMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQ 116
LI G C VG LKEA LL M + + PNA T+N L+DG C+ GK V++ M +
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKED 435
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+KPNVVT N+++ G C +N A M + GV +V Y +I+ C + V++A
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 177 L 177
+
Sbjct: 496 M 496
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 48/210 (22%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-------------- 53
+ L+ + V PN V + I S CK+ + A+D+ S+++ +
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 54 ---------------------ILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNID-- 90
I P+V T LI C + EA+ + ++M K D
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 91 ----PNAYTFNILLDGLCKEGKV-----LAVMMK--QGVKPNVVTYNSLMDGYCLVGEVN 139
++ FN L+DGLCK G++ L V MK + PN VTYN L+DGYC G++
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
AK++++ M + + P+V I+ G+C+
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +++ +++ + PNVV +TI+G C+ ++ A + +M + + NV T+
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC---------------KE 106
+LI+ C V +++A+ ++M+ P+A + L+ GLC KE
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKE 539
Query: 107 G--------------------------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
G ++L M K+G KP+ +TYN+L+ + +
Sbjct: 540 GGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFES 599
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ ++ M + G+ P V Y +I+ C + +DEAL L
Sbjct: 600 VERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ +Y +I C+ + DA + ++ ++ +N LI FC ++ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEM 568
Query: 81 LDEMIMKNIDPNAYTFNILLD--GLCKEGKVLAVMMKQ----GVKPNVVTYNSLMDGYCL 134
L +M + P++ T+N L+ G K+ + + MM+Q G+ P V TY +++D YC
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 135 VGEVNKAKDILNSMA-QSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
VGE+++A + M S V P+ Y ++IN K+ +AL+L
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSL 674
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEM-LAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
P V Y +I ++C + +A L+ +M L ++ PN +N LI F +G +A+S
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYC 133
L +EM MK + PN T+N L L ++ K++ M++Q +PN +T LM+
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVI 163
E+ K + + + + T + V
Sbjct: 734 GSDELVKLRKFMQGYSVASPTEKASPFDVF 763
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 4 TRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNS 63
T ++L +E + P+ + Y+T+I F K K + +M + P V T+ +
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 64 LIYGFCIVGLLKEAISLLDEM-IMKNIDPNAYTFNILLDGLCKEGKV-LAVMMKQG---- 117
+I +C VG L EA+ L +M + ++PN +NIL++ K G A+ +K+
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Query: 118 -VKPNVVTYNSL 128
V+PNV TYN+L
Sbjct: 682 MVRPNVETYNAL 693
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL--PNV 58
MG S+ + +++ M N + + ++ ++ LV DAF + EML K + PN
Sbjct: 165 MGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNR 222
Query: 59 FTFNSLIYGFCIVGLLKEA--ISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VL 110
T + +++ LL E I+L+ + PN+ + LCK + +L
Sbjct: 223 ITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDIL 282
Query: 111 AVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
+ +MK +N+L+ ++++ D++ M + + PDV ++IN LCK
Sbjct: 283 SDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKS 342
Query: 171 KMVDEALTLLS 181
+ VDEAL +
Sbjct: 343 RRVDEALEVFE 353
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+++ Y+ +IG FC +++ ++M + P+ T+N+LI F + ++
Sbjct: 545 DLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-------MKQGVKPNVVTYNSLMDGYCL 134
++M +DP T+ ++D C G++ + + V PN V YN L++ +
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVII-------NGLCKIKMVDE 175
+G +A + M V P+V+ Y + G +K++DE
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V PN V+Y+ +I +F K A L EM K + PNV T+N+L + +
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLL 707
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
L+DEM+ ++ +PN T IL++ L + +V M GY +
Sbjct: 708 KLMDEMVEQSCEPNQITMEILMERLSGSDE-------------LVKLRKFMQGYSVASPT 754
Query: 139 NKA 141
KA
Sbjct: 755 EKA 757
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P++V ++ +I + C K + +A L S++ P+ F +N+++ GFC + EA+
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGY 132
+ +M + ++P+ T+N L+ GL K G+V L M+ G +P+ TY SLM+G
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTA 187
C GE A +L M G P+ Y +++GLCK +++D+ + L + K +
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSG 400
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 6/178 (3%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
R ++ L+ K+ P+ +Y+TI+ FC S+A +Y +M + + P+ T+N+L
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGV 118
I+G G ++EA L M+ +P+ T+ L++G+C++G+ L M +G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGC 366
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
PN TYN+L+ G C ++K ++ M SGV + Y ++ L K V EA
Sbjct: 367 APNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEA 424
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ V + S C+ V +A DL E+ K P+ +T+N L+ C L
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 81 LDEMIMK-NIDPNAYTFNILLDGLCKEGKVLAVMM------KQGVKPNVVTYNSLMDGYC 133
+DEM ++ P+ +F IL+D +C + M G KP+ YN++M G+C
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ + ++A + M + GV PD Y +I GL K V+EA
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 35 KDKLVSDAFDLYSEMLAKRILPNVFTF-NSLIYGFCIVGLLKEAISLLDEMI--MKNIDP 91
K +SDA L++ + A +P F NS++ + + ++ + + L ++ N P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 92 NAYTFNILLDGLCKE--------GKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKD 143
TF ILL C+ +VL +M+ G++P+ VT + + C G V++AKD
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 144 ILNSMAQSGVTPDVQCYTVIINGLCKIK 171
++ + + PD Y ++ LCK K
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCK 208
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G ++LR + + V NVV Y+++I +CK L+ +A ++ + K+++ +
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHM 333
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+ L+ G+C G +++A+ + D MI + N N L++G CK G ++ + M
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+KP+ TYN+L+DGYC G V++A + + M Q V P V Y +++ G +I
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 175 EALTLLSL 182
+ L+L +
Sbjct: 454 DVLSLWKM 461
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 7/144 (4%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK-RILPNVFTFNSLIYGFCIVGLLK 75
KL++PN ++Y+ I CK + DA L+S++L+ R +P+ +T+ LI+G I G +
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 76 EAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLM 129
+A +L DEM +K I PN T+N L+ GLCK G V L + ++G+ PN +TYN+L+
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 130 DGYCLVGEVNKAKDILNSMAQSGV 153
DG G V +A + M + G+
Sbjct: 833 DGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 101/185 (54%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
GQ R ++++ + V N + +++I +CK + +A ++S M + P+ T+
Sbjct: 345 GQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTY 404
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N+L+ G+C G + EA+ L D+M K + P T+NILL G + G V M+K
Sbjct: 405 NTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+GV + ++ ++L++ +G+ N+A + ++ G+ D V+I+GLCK++ V+E
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 176 ALTLL 180
A +L
Sbjct: 525 AKEIL 529
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 6/186 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G +++L + + ++ + + + +I CK + V++A ++ + R P V T
Sbjct: 484 LGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQT 543
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG------LCKEGKVLAVMM 114
+ +L +G+ VG LKEA ++ + M K I P +N L+ G L K ++ +
Sbjct: 544 YQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELR 603
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+G+ P V TY +L+ G+C +G ++KA M + G+T +V + I N L ++ +D
Sbjct: 604 ARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKID 663
Query: 175 EALTLL 180
EA LL
Sbjct: 664 EACLLL 669
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILP-NVFT 60
G+ +L + ++ V P+V S ++ ++C+ V A E + L NV T
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+NSLI G+ ++G ++ +L M + + N T+ L+ G CK+G V ++
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
++ + + Y LMDGYC G++ A + ++M + GV + +ING CK +
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 175 EALTLLS-LQKWTAK 188
EA + S + W+ K
Sbjct: 384 EAEQIFSRMNDWSLK 398
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 6/156 (3%)
Query: 27 STIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIM 86
ST++ + K ++A L+ +LA+ +L + T N +I G C + + EA +LD + +
Sbjct: 475 STLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNI 534
Query: 87 KNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
P T+ L G K G V M ++G+ P + YN+L+ G +NK
Sbjct: 535 FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNK 594
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
D++ + G+TP V Y +I G C I M+D+A
Sbjct: 595 VADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 95/194 (48%), Gaps = 17/194 (8%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G + + + +E K + P + MY+T+I K + ++ DL E+ A+ + P V T
Sbjct: 554 VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVAT 613
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-LAVMMKQGVK 119
+ +LI G+C +G++ +A + EMI K I N + + + L + K+ A ++ Q
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQ--- 670
Query: 120 PNVVTYNSLMDGYCLVGEVNK------------AKDILNSMAQSGVTPDVQCYTVIINGL 167
+V ++ L+ GY + E + A+ + NS + + P+ Y V I GL
Sbjct: 671 -KIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGL 729
Query: 168 CKIKMVDEALTLLS 181
CK +++A L S
Sbjct: 730 CKAGKLEDARKLFS 743
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 45/214 (21%)
Query: 13 KIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNV-------------- 58
++ + + P V Y +I +C ++ A+ EM+ K I NV
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 59 ------------FTFNSLIYGFCIVGLLKEAIS---LLDEMIMKNID---------PNAY 94
F+ L+ G+ + EA + L + I ++++ PN
Sbjct: 661 KIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNI 720
Query: 95 TFNILLDGLCKEGKV-------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNS 147
+N+ + GLCK GK+ ++ P+ TY L+ G + G++NKA + +
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDE 780
Query: 148 MAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
MA G+ P++ Y +I GLCK+ VD A LL
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLH 814
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + L ++ K ++PN+V Y+ +I CK V A L ++ K I PN T+
Sbjct: 769 GDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITY 828
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNI 89
N+LI G G + EA+ L ++MI K +
Sbjct: 829 NTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 49 MLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
ML I P T+NS+I GFC + +A +LD M K P+ TF+ L++G CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 109 V------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTV 162
V M ++G+ N VTY +L+ G+C VG+++ A+D+LN M GV PD +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 163 IINGLCKIKMVDEALTLLS-LQK 184
++ GLC K + +A +L LQK
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P + Y+++I FCK V DA + M +K P+V TF++LI G+C + +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
+ EM + I N T+ L+ G C+ G + A M+ GV P+ +T++ ++ G
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 133 CLVGEVNKAKDILNSMAQS 151
C E+ KA IL + +S
Sbjct: 126 CSKKELRKAFAILEDLQKS 144
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 62/101 (61%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++L + K P+VV +ST+I +CK K V + +++ EM + I+ N T+ +LI+GF
Sbjct: 31 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 90
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV 109
C VG L A LL+EMI + P+ TF+ +L GLC + ++
Sbjct: 91 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 102 bits (253), Expect = 2e-22, Method: Composition-based stats.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 43/224 (19%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
GQ R +L++L ++ V PN+++ +T I F + + A M I+PNV T+
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--MMKQ--- 116
N +I G+C + ++EAI LL++M K P+ ++ ++ LCKE +++ V +MK+
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 117 --GVKPNVVTYNSLMD----------------------------GY-------CLVGEVN 139
G+ P+ VTYN+L+ GY C G ++
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 140 KAKDILNSMAQSG-VTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
+AKD++N M G PDV YT ++NG C++ VD+A LL +
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQV 479
Score = 100 bits (249), Expect = 6e-22, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 108/195 (55%), Gaps = 11/195 (5%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-ILPNVFTFNSLI 65
+++LL + K +P+ V Y TI+G CK+K + + DL +M + ++P+ T+N+LI
Sbjct: 331 AIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLI 390
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQG-V 118
+ EA+ L + K + ++ ++ LCKEG+ ++ M+ +G
Sbjct: 391 HMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHC 450
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
P+VVTY ++++G+C +GEV+KAK +L M G P+ YT ++NG+C+ EA
Sbjct: 451 PPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEARE 510
Query: 179 LLSLQK---WTAKTL 190
++++ + W+ ++
Sbjct: 511 MMNMSEEHWWSPNSI 525
Score = 87.0 bits (214), Expect = 7e-18, Method: Composition-based stats.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++R++ K P V + ++ S C+D +A E L K NV F
Sbjct: 538 GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 597
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
++I+GFC L A+S+LD+M + N + +T+ L+D L K+G++ + M+
Sbjct: 598 TTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLH 657
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ P VTY +++ YC +G+V+ IL M + Y +I LC + ++E
Sbjct: 658 KGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEE 715
Query: 176 ALTLL 180
A TLL
Sbjct: 716 ADTLL 720
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 6/186 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + +LL+ + PN V Y+ ++ C+ +A ++ + PN T
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
++ +++G G L EA ++ EM++K P N+LL LC++G K + +
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECL 586
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+G NVV + +++ G+C E++ A +L+ M DV YT +++ L K +
Sbjct: 587 NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIA 646
Query: 175 EALTLL 180
EA L+
Sbjct: 647 EATELM 652
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 86/167 (51%), Gaps = 5/167 (2%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+T + + + + K NVV ++T+I FC++ + A + +M +VFT+
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV---LAVMMKQGV 118
+L+ G + EA L+ +M+ K IDP T+ ++ C+ GKV +A++ K
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Query: 119 KPNVVT-YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ-CYTVI 163
+ T YN +++ C++G++ +A +L + ++ D + CY ++
Sbjct: 693 RQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALM 739
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
+S ++ S+ + + DA + + M + PN+ N+ I F L++A+ L+ M
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 86 MKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ I PN T+N ++ G C +V L M +G P+ V+Y ++M C +
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 140 KAKDILNSMAQS-GVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ +D++ MA+ G+ PD Y +I+ L K DEAL L
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFL 406
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+V Y+T++ + K +++A +L +ML K I P T+ ++I+ +C +G + + +++L
Sbjct: 628 DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAIL 687
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLV 135
++MI + Y N +++ LC GK+ L +++ + + T +LM+GY
Sbjct: 688 EKMISRQKCRTIY--NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKK 745
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G A + M + PDV+ + L VDEA L+
Sbjct: 746 GVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLM 790
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L++K+ K + P V Y T+I +C+ V D + +M++++ ++
Sbjct: 643 GRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIY-- 700
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N +I C++G L+EA +LL +++ +A T L++G K+G KV M
Sbjct: 701 NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFN 760
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG-VTP 155
+ + P+V L L G+V++A ++ + + G ++P
Sbjct: 761 RNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISP 801
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 41/216 (18%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY--- 66
L+R+I K ++ + V Y+ +I +C+ AF L+ EM+ I P FT+ SLIY
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 67 --------------------------------GFCIVGLLKEAISLLDEMIMKNIDPNAY 94
G C +G + A SLL EM M +I+P+
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV 503
Query: 95 TFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
T+N L+ GLC EGK ++ M ++G+KP+ ++YN+L+ GY G+ A + + M
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Query: 149 AQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
G P + Y ++ GL K + + A LL K
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+TR + +L K+ GK + P++VM +T++ C + AF L EM I P+ T+N
Sbjct: 447 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYN 506
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQ 116
L+ G C G +EA L+ EM + I P+ ++N L+ G K+G V M+
Sbjct: 507 CLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSL 566
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
G P ++TYN+L+ G E A+++L M G+ P+ + +I + +
Sbjct: 567 GFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
+L + +++ ++ C+ ++V +A + + M K P T N ++ + ++
Sbjct: 149 RLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIEN 208
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMD 130
A +M I N YTFNI+++ LCKEGK+ L +M G+KP +VTYN+L+
Sbjct: 209 AWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQ 268
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
G+ L G + A+ I++ M G PD+Q Y I++ +C E L
Sbjct: 269 GFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL 315
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 101/184 (54%), Gaps = 7/184 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ RAS ++LR+++ ++P+ V Y+ +I + + AF EM+ + ++P +T+N
Sbjct: 308 EGRAS-EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYN 366
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG---KVLAV---MMKQ 116
+LI+G + ++ A L+ E+ K I ++ T+NIL++G C+ G K A+ MM
Sbjct: 367 TLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G++P TY SL+ C + +A ++ + G+ PD+ +++G C I +D A
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 177 LTLL 180
+LL
Sbjct: 487 FSLL 490
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 38/201 (18%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE-- 76
+ P +V Y+T++ F + A + SEM +K P++ T+N ++ C G E
Sbjct: 256 IKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL 315
Query: 77 ------------------------------AISLLDEMIMKNIDPNAYTFNILLDGLCKE 106
A + DEM+ + + P YT+N L+ GL E
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME 375
Query: 107 GKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCY 160
K+ A + ++G+ + VTYN L++GYC G+ KA + + M G+ P Y
Sbjct: 376 NKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTY 435
Query: 161 TVIINGLCKIKMVDEALTLLS 181
T +I LC+ EA L
Sbjct: 436 TSLIYVLCRKNKTREADELFE 456
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G + LL++++ + P+ V Y+ ++ C + +A +L EM + I P+ +
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK--EG----KVLAVMM 114
+N+LI G+ G K A + DEM+ +P T+N LL GL K EG ++L M
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Query: 115 KQGVKPNVVTYNSLMDG 131
+G+ PN ++ S+++
Sbjct: 600 SEGIVPNDSSFCSVIEA 616
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 99.8 bits (247), Expect = 9e-22, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
++ +RK +L+ P ++ ++ F +V A ++ EM + P+ + F L+
Sbjct: 154 IEEMRKTNPELIEPE--LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDA 211
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
C G +KEA + ++M K PN F LL G C+EGK VL M + G++P+
Sbjct: 212 LCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPD 270
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI-KMVDEALTLL 180
+V + +L+ GY G++ A D++N M + G P+V CYTV+I LC+ K +DEA+ +
Sbjct: 271 IVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVF 330
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 89/171 (52%), Gaps = 7/171 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN+ +++++ +C++ + +A ++ +M + P++ F +L+ G+ G + +A L
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 293
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK-------VLAVMMKQGVKPNVVTYNSLMDGYC 133
+++M + +PN + +L+ LC+ K V M + G + ++VTY +L+ G+C
Sbjct: 294 MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
G ++K +L+ M + GV P Y I+ K + +E L L+ K
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMK 404
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 7/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++L +++ + P++V+++ ++ + ++DA+DL ++M + PNV +
Sbjct: 250 GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCY 309
Query: 62 NSLIYGFCIV-GLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
LI C + EA+ + EM + + T+ L+ G CK G VL M
Sbjct: 310 TVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMR 369
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
K+GV P+ VTY +M + + + +++ M + G PD+ Y V+I CK+ V
Sbjct: 370 KKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 175 EALTL 179
EA+ L
Sbjct: 430 EAVRL 434
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Query: 54 ILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM 113
I P +F L+ F ++K+A+ +LDEM ++P+ Y F LLD LCK G V
Sbjct: 165 IEPELFVV--LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 114 -----MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
M++ PN+ + SL+ G+C G++ +AK++L M ++G+ PD+ +T +++G
Sbjct: 223 KVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYA 282
Query: 169 KIKMVDEALTLLS 181
+ +A L++
Sbjct: 283 HAGKMADAYDLMN 295
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 10/187 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L + K VMP+ V Y I+ + K + + +L +M + P++ +
Sbjct: 356 GMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIY 415
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N +I C +G +KEA+ L +EM + P TF I+++G +G ++ M+
Sbjct: 416 NVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVS 475
Query: 116 QGV--KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQ--SGVTPDVQCYTVIINGLCKIK 171
+G+ P T SL++ ++ AKD+ + ++ S +V +T+ I+ L
Sbjct: 476 RGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKG 535
Query: 172 MVDEALT 178
V EA +
Sbjct: 536 HVKEACS 542
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
P++ +Y II C +K +A+ ++ + K P+ + ++I GFC G L A
Sbjct: 280 FPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARK 339
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYC 133
L EMI K + PN + +N+++ G K G++ V M++ G +++ N+++ G+C
Sbjct: 340 LWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC 399
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
G+ ++A +I +M+++GVTP+ Y +I G CK V++ L L
Sbjct: 400 SHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKL 445
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 9/180 (5%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+ + ++ K P+ V+Y+T+I FC+ + A L+ EM+ K + PN F +N +I+G
Sbjct: 305 IFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHF 364
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVV 123
G + + +EM+ + N ++ G C GK + M + GV PN +
Sbjct: 365 KRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAI 424
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQ 183
TYN+L+ G+C +V K + + G+ P Y ++ L KM D T L+L+
Sbjct: 425 TYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL---KMSDSVATSLNLE 481
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 29 IIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKN 88
+I + C VS+ ++L + L + + P + + LI GFC +G +L MI N
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 89 IDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAK 142
P+ Y + ++ GLC K L + +G P+ V Y +++ G+C G + A+
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 143 DILNSMAQSGVTPDVQCYTVIINGLCK 169
+ M + G+ P+ Y V+I+G K
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFK 365
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 8/166 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P + + ++ LV +A ++Y+ + I +V T NS++ G L L
Sbjct: 143 PEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWEL 202
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
EM+ D L+ LC G V L +KQG+ P Y L+ G+C
Sbjct: 203 HKEMVESEFDSE--RIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCE 260
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+G ++L++M P + Y II GLC K EA +
Sbjct: 261 IGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIF 306
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 96/168 (57%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
++ +V Y+ +I CK + + +A +EM + I PN+ TFN+ + G+ + G +K+
Sbjct: 421 LLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVH 480
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGY 132
+L+++++ P+ TF+++++ LC+ ++ M++ G++PN +TYN L+
Sbjct: 481 GVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSC 540
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C G+ +++ + M ++G++PD+ Y I CK++ V +A LL
Sbjct: 541 CSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELL 588
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 6/142 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V+ +S II C+ K + DAFD + EML I PN T+N LI C G ++ L
Sbjct: 493 PDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKL 552
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
+M + P+ Y +N + CK KV L M++ G+KP+ TY++L+
Sbjct: 553 FAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 135 VGEVNKAKDILNSMAQSGVTPD 156
G ++A+++ +S+ + G PD
Sbjct: 613 SGRESEAREMFSSIERHGCVPD 634
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
L +++ + + PN+V ++T + + V + ++L P+V TF+ +I C
Sbjct: 447 FLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLC 506
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVV 123
+K+A EM+ I+PN T+NIL+ C G K+ A M + G+ P++
Sbjct: 507 RAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLY 566
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
YN+ + +C + +V KA+++L +M + G+ PD Y+ +I L + EA + S
Sbjct: 567 AYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFS 624
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
Q LRKI + +P+ ++ + K + + ++ +++ + P + L+
Sbjct: 341 QFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQAL 400
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNV 122
E L +M + + + Y++N ++D LCK ++ L M +G+ PN+
Sbjct: 401 LNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNL 460
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
VT+N+ + GY + G+V K +L + G PDV +++IIN LC+ K + +A
Sbjct: 461 VTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAF 515
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P Y ++ + + S+ +M +L +V+++N++I C ++ A
Sbjct: 386 VKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAA 445
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG---KVLAVMMK---QGVKPNVVTYNSLMDGY 132
L EM + I PN TFN L G G KV V+ K G KP+V+T++ +++
Sbjct: 446 MFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCL 505
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
C E+ A D M + G+ P+ Y ++I C D ++ L + K
Sbjct: 506 CRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMK 557
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ Y+ +I CK +V +A L +M + PNVFT+ LI GF I G + EA+
Sbjct: 213 PDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQ 272
Query: 81 LDEMIMKNIDPNAYTFNILLDGL------CKEGKVLAVMMKQGVKPNVVTYNSLMDGYCL 134
L+ M ++ ++PN T + G+ CK +VL M++ V Y++++ YCL
Sbjct: 273 LEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVL--YCL 330
Query: 135 VGE--VNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+ L + + G PD + ++ L K
Sbjct: 331 SNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLK 367
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ +Y+ +I + K + A+ + +M + P+ FT+N LI+G C G++ EAI L
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDG 131
+ +M + PN +T+ IL+DG G+V L +M + + PN T + + G
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHG 294
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 6/169 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
S++LL++I + + +IGS+ + L D+++++ + P+ +N++I
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
L A +M P+ +T+NIL+ G+CK+G +++ M ++G +P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
NV TY L+DG+ + G V++A L M + P+ ++G+ +
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 64 LIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQG 117
LI + +GL K + ++ + P+ +N ++D L K + M G
Sbjct: 151 LIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDG 210
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
KP+ TYN L+ G C G V++A ++ M Q G P+V YT++I+G VDEAL
Sbjct: 211 CKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEAL 270
Query: 178 TLLSLQK 184
L + +
Sbjct: 271 KQLEMMR 277
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 7/199 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + +LLR E + + YS++I + + + AF+LY+ ML K I P++
Sbjct: 281 LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIIL 340
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVLAVMMK 115
+ LI G G +++A+ LL M K I P+ Y +N ++ LC +EG+ L + M
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 116 QGVK-PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ P+ T+ L+ C G V +A++I + +SG +P V + +I+GLCK +
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELK 460
Query: 175 EALTLLS-LQKWTAKTLFL 192
EA LL ++ +LFL
Sbjct: 461 EARLLLHKMEVGRPASLFL 479
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 45/224 (20%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L+LL + K + P+ Y+ +I + C L+ + L EM P+ T
Sbjct: 352 GKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH 411
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------------ 109
LI C GL++EA + E+ P+ TFN L+DGLCK G++
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Query: 110 ---------------------------------LAVMMKQGVKPNVVTYNSLMDGYCLVG 136
LA G P++V+YN L++G+C G
Sbjct: 472 GRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAG 531
Query: 137 EVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+++ A +LN + G++PD Y +INGL ++ +EA L
Sbjct: 532 DIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 7/188 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSD-AFDLYSEMLAKRILPNVF 59
MG +++ +++ P+V Y+ I+ ++++ AF +Y+EML PN++
Sbjct: 140 MGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLY 199
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVM 113
TF L+ G G +A + D+M + I PN T+ IL+ GLC+ G K+ M
Sbjct: 200 TFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
G P+ V +N+L+DG+C +G + +A ++L + G ++ Y+ +I+GL + +
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRY 319
Query: 174 DEALTLLS 181
+A L +
Sbjct: 320 TQAFELYA 327
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
Q L +++ V + + +I ++ K + A + + M P+VFT+N ++
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR-- 170
Query: 69 CIVGLLKE-----AISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQG 117
V + +E A ++ +EM+ N PN YTF IL+DGL K+G K+ M +G
Sbjct: 171 --VMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
+ PN VTY L+ G C G + A+ + M SG PD + +++G CK+ + EA
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288
Query: 178 TLLSL 182
LL L
Sbjct: 289 ELLRL 293
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 44 DLY----SEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNIL 99
DLY E+ + + + + F LI + +G+ ++A+ M + P+ +T+N++
Sbjct: 109 DLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVI 168
Query: 100 LDGLCKEG-------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
L + +E V M+K PN+ T+ LMDG G + A+ + + M G
Sbjct: 169 LRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLL 180
++P+ YT++I+GLC+ D+A L
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLF 256
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++LL+ +E V Y+T+I C+ L+S A L + M + PNV TF
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+LI+GFC L+EA + EM N+ PN T+N L++G ++G + M+
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G++ +++TYN+L+ G C + KA + + + + P+ ++ +I G C K D
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 176 ALTL 179
L
Sbjct: 432 GFEL 435
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ PNVV ++T+I FC+ + +A ++ EM A + PN T+N+LI G+ G + A
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAF 363
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------KQGVKPNVVTYNSLMDGY 132
++M+ I + T+N L+ GLCK+ K K+ + PN T+++L+ G
Sbjct: 364 RFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C+ ++ ++ SM +SG P+ Q + ++++ C+ + D A +L
Sbjct: 424 CVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL 471
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 1 MGQTRA--SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNV 58
+GQ R +L+ R++ + PN + ++ +C+ + +L +M
Sbjct: 214 LGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD 273
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAV 112
++N+LI G C GLL A+ L + M + PN TFN L+ G C+ KV
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
M V PN VTYN+L++GY G+ A M +G+ D+ Y +I GLCK
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK 390
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P V + + S V A Y EM +I PN +T N ++ G+C G L + I
Sbjct: 200 LPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE 259
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYC 133
LL +M ++N L+ G C++G K+ +M K G++PNVVT+N+L+ G+C
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
++ +A + M V P+ Y +ING
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 8 LQLLRKIEGKL----VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNS 63
LQ K+ G++ V PN V Y+T+I + + AF Y +M+ I ++ T+N+
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 64 LIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAVMMKQG 117
LI+G C ++A + E+ +N+ PN+ TF+ L+ G C + ++ M++ G
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
PN T+N L+ +C + + A +L M + + D + + NGL
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
++ ++ +F K +A D + +M LP V + N+ + G + A+ EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 85 IMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
I PN YT N+++ G C+ GK +L M + G + V+YN+L+ G+C G +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ A + N M +SG+ P+V + +I+G C+ + EA
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
+TR + Q +++++ + ++PN +S +I C K F+LY M+ PN TF
Sbjct: 392 AKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTF 451
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
N L+ FC A +L EM+ ++I ++ T + + +GL +GK
Sbjct: 452 NMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ +++ Y+ +I CK A E+ + ++PN TF++LI G C+
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMKQGVKPNVVTYNSLMDGY 132
L MI PN TFN+L+ C+ +VL M+++ + + T + + +G
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Query: 133 CLVGEVNKAKDILNSM 148
G+ K +L M
Sbjct: 494 KHQGKDQLVKKLLQEM 509
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
F+SL F + + A +M P + N + L +G+V M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ + PN T N +M GYC G+++K ++L M + G Y +I G C+ ++
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 175 EALTL 179
AL L
Sbjct: 291 SALKL 295
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++LL+ +E V Y+T+I C+ L+S A L + M + PNV TF
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+LI+GFC L+EA + EM N+ PN T+N L++G ++G + M+
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G++ +++TYN+L+ G C + KA + + + + P+ ++ +I G C K D
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADR 431
Query: 176 ALTL 179
L
Sbjct: 432 GFEL 435
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 90/168 (53%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ PNVV ++T+I FC+ + +A ++ EM A + PN T+N+LI G+ G + A
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAF 363
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------KQGVKPNVVTYNSLMDGY 132
++M+ I + T+N L+ GLCK+ K K+ + PN T+++L+ G
Sbjct: 364 RFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQ 423
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C+ ++ ++ SM +SG P+ Q + ++++ C+ + D A +L
Sbjct: 424 CVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVL 471
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 1 MGQTRA--SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNV 58
+GQ R +L+ R++ + PN + ++ +C+ + +L +M
Sbjct: 214 LGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD 273
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAV 112
++N+LI G C GLL A+ L + M + PN TFN L+ G C+ KV
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
M V PN VTYN+L++GY G+ A M +G+ D+ Y +I GLCK
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCK 390
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P V + + S V A Y EM +I PN +T N ++ G+C G L + I
Sbjct: 200 LPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIE 259
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYC 133
LL +M ++N L+ G C++G K+ +M K G++PNVVT+N+L+ G+C
Sbjct: 260 LLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC 319
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
++ +A + M V P+ Y +ING
Sbjct: 320 RAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 8 LQLLRKIEGKL----VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNS 63
LQ K+ G++ V PN V Y+T+I + + AF Y +M+ I ++ T+N+
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 64 LIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAVMMKQG 117
LI+G C ++A + E+ +N+ PN+ TF+ L+ G C + ++ M++ G
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
PN T+N L+ +C + + A +L M + + D + + NGL
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
++ ++ +F K +A D + +M LP V + N+ + G + A+ EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 85 IMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
I PN YT N+++ G C+ GK +L M + G + V+YN+L+ G+C G +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ A + N M +SG+ P+V + +I+G C+ + EA
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
+TR + Q +++++ + ++PN +S +I C K F+LY M+ PN TF
Sbjct: 392 AKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTF 451
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
N L+ FC A +L EM+ ++I ++ T + + +GL +GK
Sbjct: 452 NMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK 498
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ +++ Y+ +I CK A E+ + ++PN TF++LI G C+
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMKQGVKPNVVTYNSLMDGY 132
L MI PN TFN+L+ C+ +VL M+++ + + T + + +G
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Query: 133 CLVGEVNKAKDILNSM 148
G+ K +L M
Sbjct: 494 KHQGKDQLVKKLLQEM 509
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
F+SL F + + A +M P + N + L +G+V M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ + PN T N +M GYC G+++K ++L M + G Y +I G C+ ++
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 175 EALTL 179
AL L
Sbjct: 291 SALKL 295
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 7/182 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLA-KRILPNVFTFNSLI 65
+L+L ++ K V P V + T+I CKD V +A + +ML + P V + SLI
Sbjct: 171 ALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLI 230
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVK 119
C +G L A L DE I +A ++ L+ L K G+ +L M ++G K
Sbjct: 231 KALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCK 290
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
P+ VTYN L++G+C+ + A +L+ M + G+ PDV Y +I+ +IK +EA L
Sbjct: 291 PDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYL 350
Query: 180 LS 181
Sbjct: 351 FE 352
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 88/226 (38%), Gaps = 76/226 (33%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL----------------------- 55
++P +++ +I F + KL S A ++ EM R
Sbjct: 79 IVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMK 138
Query: 56 -----------PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
P+ T+N LI+G G +A+ L DEM+ K + P TF L+ GLC
Sbjct: 139 ERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLC 198
Query: 105 KEGKV-LAVMMKQ------GVKPNVVTYNSLMDGYCLVGEVN---KAKD----------- 143
K+ +V A+ MK GV+P V Y SL+ C +GE++ K KD
Sbjct: 199 KDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDA 258
Query: 144 ---------------------ILNSMAQSGVTPDVQCYTVIINGLC 168
IL M++ G PD Y V+ING C
Sbjct: 259 AIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFC 304
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 91/185 (49%), Gaps = 7/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G++ +L ++ K P+ V Y+ +I FC + A + EM+ K + P+V ++
Sbjct: 272 GRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISY 331
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAVMMK 115
N ++ F + +EA L ++M + P+ ++ I+ DGLC + +L M+
Sbjct: 332 NMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLF 391
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G KP + C G++ +++S+ + G+ D ++V+I +CK ++ +
Sbjct: 392 KGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR-GIAGDADVWSVMIPTMCKEPVISD 450
Query: 176 ALTLL 180
++ LL
Sbjct: 451 SIDLL 455
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 12 RKIEGKLVMPNVVM----YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
RK+ +++ N V+ Y+ ++ + CK V + ++ EM + P+ ++F I+
Sbjct: 228 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 287
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
+C G + A +LD M ++ PN YTFN ++ LCK KV L M+++G P+
Sbjct: 288 YCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD 347
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
TYNS+M +C EVN+A +L+ M ++ PD Y +++ L +I D A
Sbjct: 348 TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRA 402
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ ++ I ++C V A+ + M ++PNV+TFN +I C + +A L
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 81 LDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAVMMKQGVKPNVVTYNSLMDGYCL 134
LDEMI K +P+ +T+N ++ C + K+L+ M + P+ TYN ++
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIK 171
+G ++A +I M++ P V YTV+I+GL + K
Sbjct: 396 IGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKK 432
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P V ++ S C K V+ A + + + I+P+ T++ L+ G+ + A
Sbjct: 169 IKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGAR 228
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
+ DEM+ +N + +N LLD LCK G K+ M G+KP+ ++ + Y
Sbjct: 229 KVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAY 288
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C G+V+ A +L+ M + + P+V + II LCK + VD+A LL
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+ K +G ++P+ YS ++ + + + S A ++ EML + + ++ +N+L+
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNV 122
C G + + EM + P+AY+F I + C G KVL M + + PNV
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
T+N ++ C +V+ A +L+ M Q G PD Y I+ C V+ A LLS
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLS 372
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 6/162 (3%)
Query: 29 IIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKN 88
+ ++ + L S+A ++ M+ I P V + L++ C + A +
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFG 203
Query: 89 IDPNAYTFNILLDGLCK------EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAK 142
I P+A T++IL+ G + KV M+++ +++ YN+L+D C G+V+
Sbjct: 204 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 263
Query: 143 DILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+ M G+ PD + + I+ C V A +L K
Sbjct: 264 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 8/181 (4%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L L+ K+E + P+ ++++ II + + + A ++ +M P TFN+LI G
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKG 433
Query: 68 FCIVGLLKEAISLLDEMIMKN-IDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKP 120
+ +G L+E+ LLD M+ + PN T NIL+ C + K+ M GVKP
Sbjct: 434 YGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKP 493
Query: 121 NVVTYNSLMDGYCLVGEVNKAKD-ILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+VVT+N+L Y +G A+D I+ M + V P+V+ I+NG C+ ++EAL
Sbjct: 494 DVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRF 553
Query: 180 L 180
Sbjct: 554 F 554
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 6/167 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V PNV TI+ +C++ + +A + M + PN+F FNSLI GF + +
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
++D M + P+ TF+ L++ G ++ M++ G+ P++ ++ L GY
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGY 646
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
GE KA+ ILN M + GV P+V YT II+G C + +A+ +
Sbjct: 647 ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQV 693
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 100/182 (54%), Gaps = 7/182 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLY-SEMLAKRILPNVFTFNSLI 65
+ ++ K++ V P+VV ++T+ ++ + A D+ ML ++ PNV T +++
Sbjct: 479 AWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIV 538
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAVMMKQGVK 119
G+C G ++EA+ M + PN + FN L+ G G+V+ +M + GVK
Sbjct: 539 NGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVK 598
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
P+VVT+++LM+ + VG++ + ++I M + G+ PD+ ++++ G + ++A +
Sbjct: 599 PDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQI 658
Query: 180 LS 181
L+
Sbjct: 659 LN 660
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P+VV +ST++ ++ + ++Y++ML I P++ F+ L G+ G ++A
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAE 656
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG---KVLAVMMKQ----GVKPNVVTYNSLMDG 131
+L++M + PN + ++ G C G K + V K G+ PN+ TY +L+ G
Sbjct: 657 QILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWG 716
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
+ + KA+++L M V P + +I +G I
Sbjct: 717 FGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSI 755
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VL 110
+V + L+ G G +EA S+ + +I + P+ T+ L+ L ++ ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 111 AVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
+ + K G+KP+ + +N++++ G +++A I M +SG P + +I G KI
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 171 KMVDEALTLLSL 182
++E+ LL +
Sbjct: 438 GKLEESSRLLDM 449
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 102/189 (53%), Gaps = 6/189 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+T ++++L KI K V+ + +MY+T+ + K K +S DL+ +M P++FT+
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
N LI F VG + EAI++ +E+ + P+ ++N L++ L K G V M +
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ P+VVTY++LM+ + V A + M G P++ Y ++++ L K E
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 176 ALTLLSLQK 184
A+ L S K
Sbjct: 601 AVDLYSKMK 609
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ ++ + ++E P+++ Y+++I K+ V +A + EM K + P+V T
Sbjct: 490 VGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVT 549
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
+++L+ F ++ A SL +EM++K PN T+NILLD L K G+ + + M
Sbjct: 550 YSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK 609
Query: 115 KQGVKPNVVTYNSL 128
+QG+ P+ +TY L
Sbjct: 610 QQGLTPDSITYTVL 623
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 38/198 (19%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL----------------- 64
NVV Y+T++ K K+V A ++S M+ PN +T++ L
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363
Query: 65 ----------IYGFCI-----VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK- 108
IY + + +G + EA L +M + ++ +L+ LC GK
Sbjct: 364 EISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 109 -----VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVI 163
+L+ + ++GV + + YN++ + +++ D+ M + G +PD+ Y ++
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 164 INGLCKIKMVDEALTLLS 181
I ++ VDEA+ +
Sbjct: 484 IASFGRVGEVDEAINIFE 501
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L+L++K + K+ N Y ++ ++ + + S AFD+Y E+ ++F +N L+
Sbjct: 191 LRLVKKWDLKM---NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA 247
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
+ ++A + ++M ++ + YT+ I++ + + GK + M+ +G+ N
Sbjct: 248 ---LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLN 304
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
VV YN+LM V+KA + + M ++G P+ Y++++N
Sbjct: 305 VVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 92/222 (41%), Gaps = 38/222 (17%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+ + + Q+ ++ + + Y+ +I + + +A L++EM+ + + NV
Sbjct: 248 LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVG 307
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV-------- 112
+N+L+ ++ +AI + M+ PN YT+++LL+ L EG+++ +
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK 367
Query: 113 -MMKQG-----------------------------VKPNVVTYNSLMDGYCLVGEVNKAK 142
M QG VK +Y S+++ C G+ +A
Sbjct: 368 RYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAI 427
Query: 143 DILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
++L+ + + GV D Y + + L K+K + L K
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK 469
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV---M 113
N FT+ L+ + +A + E+ + + +N+LLD L K+ K V M
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDM 261
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
K+ + + TY ++ +G+ ++A + N M G+T +V Y ++ L K KMV
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 174 DEALTLLS 181
D+A+ + S
Sbjct: 322 DKAIQVFS 329
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 6/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ A+ L+ +++ K V V+++T+I +C+ +V +A +Y M K +VFT
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
N++ F + EA L M+ + + ++ L+D CKEG V M
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 496
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+GV+PN +TYN ++ YC G++ +A+ + +M +G+ PD YT +I+G C VD
Sbjct: 497 SKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVD 556
Query: 175 EALTLLS 181
EA+ L S
Sbjct: 557 EAMRLFS 563
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V+ N V Y+ ++ K+ +SDA L+ EM + I +V + SLI C G +K A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
L DE+ K + P++YT+ L+DG+CK G++ A M +GV V +N+L+DGY
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
C G V++A I + M Q G DV I + ++K DEA
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 7/168 (4%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
A L R +EG + + + V Y+ +I +CK+ V +A L+ EM +K + PN T+N +I
Sbjct: 453 AKQWLFRMMEGGVKL-STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAVMMKQGVK 119
Y +C G +KEA L M +DP++YT+ L+ G C + ++ + M +G+
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
N VTY ++ G G+ ++A + + M + G T D + YT +I +
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 41/219 (18%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L ++ + + +V +Y+++I C+ + AF L+ E+ K + P+ +T+
Sbjct: 308 GKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTY 367
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------------ 109
+LI G C VG + A L++EM K ++ FN L+DG C++G V
Sbjct: 368 GALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQ 427
Query: 110 -----------------------------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
L MM+ GVK + V+Y +L+D YC G V +
Sbjct: 428 KGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEE 487
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
AK + M+ GV P+ Y V+I CK + EA L
Sbjct: 488 AKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 62/107 (57%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L ++ K V PN + Y+ +I ++CK + +A L + M A + P+ +T+
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
SLI+G CI + EA+ L EM +K +D N+ T+ +++ GL K GK
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 589
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 35 KDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAY 94
K + + +++ M+ + V++ ++ G C G ++++ L+ E +K I P AY
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 95 TFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
T+N +++ K+ VL VM K GV N VTY LM+ G+++ A+ + + M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 149 AQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ G+ DV YT +I+ C+ + A L
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLF 352
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L++ R++ V V + ++ C+ V + L E K I P +T+N++I
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
+ +L M + N T+ +L++ K GK + M ++G++ +
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
V Y SL+ C G + +A + + + + G++P Y +I+G+CK+ + A L++
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMN 388
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L +++++E +V Y++II CK K + +A +L EM + N
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVC 467
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
N+LI G L EA L EM P ++NIL+ GLCK GK + M++
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G KP++ TY+ L+ G C +++ A ++ + QSG+ DV + ++I+GLC + +D+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 176 ALTLLS 181
A+T+++
Sbjct: 588 AMTVMA 593
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 6/177 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
LR++ P VV Y+ +I CK +A EML P++ T++ L+ G C
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVV 123
+ A+ L + + ++ + NIL+ GLC GK V+A M + N+V
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
TYN+LM+G+ VG+ N+A I M + G+ PD+ Y I+ GLC + V A+
Sbjct: 606 TYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFF 662
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 7/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ L++ +++ ++ YS++I C V A +++E+ ++ +V T+
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTY 328
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
N+++ GFC G +KE++ L M KN N ++NIL+ GL + GK+ +M
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G + TY + G C+ G VNKA ++ + SG DV Y II+ LCK K ++E
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 176 ALTLL 180
A L+
Sbjct: 448 ASNLV 452
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++ YS ++ C+D+ + A +L+ + L + +V N LI+G C VG L +A+++
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
+ M +N N T+N L++G K G + M K G++P++++YN++M G C+
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCM 651
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
V+ A + + G+ P V + +++ +
Sbjct: 652 CRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 7/180 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
L E V PN+ Y+ +I CK K A M + P+VF+++++I
Sbjct: 135 SLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDL 194
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-------MKQGVKPN 121
G L +A+ L DEM + + P+ +NIL+DG KE M V PN
Sbjct: 195 AKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPN 254
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
V T+N ++ G G V+ I M Q+ D+ Y+ +I+GLC VD+A ++ +
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 6/184 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + R + K + Y I C + V+ A + E+ + +V+ +
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
S+I C L+EA +L+ EM ++ N++ N L+ GL ++ ++ L M K
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G +P VV+YN L+ G C G+ +A + M ++G PD++ Y++++ GLC+ + +D
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDL 552
Query: 176 ALTL 179
AL L
Sbjct: 553 ALEL 556
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
R +E V PNV ++ +I K V D ++ M +++T++SLI+G C
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 303
Query: 72 GLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-----LAVMMKQGVKPNVVTYN 126
G + +A S+ +E+ + + T+N +L G C+ GK+ L +M+ N+V+YN
Sbjct: 304 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYN 363
Query: 127 SLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
L+ G G++++A I M G D Y + I+GLC V++AL ++
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 95/188 (50%), Gaps = 8/188 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLA-KRILPNVFT 60
G+ +L+L ++ + V P+V Y+ +I F K+K A +L+ +L + PNV T
Sbjct: 198 GKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKT 257
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
N +I G G + + + + + M + + YT++ L+ GLC G V +
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
++ +VVTYN+++ G+C G++ ++ ++ M + ++ Y ++I GL + +D
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKID 376
Query: 175 EALTLLSL 182
EA + L
Sbjct: 377 EATMIWRL 384
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 84/161 (52%), Gaps = 11/161 (6%)
Query: 28 TIIGSFCKDKLVSDAFDLYSEMLAKRIL---PNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
++I ++ K+ + A D++ M + I P + ++N+L+ F + SL
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRM--REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYF 140
Query: 85 IMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ PN T+N+L+ CK+ + L M K+G KP+V +Y+++++ G++
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+ A ++ + M++ GV PDV CY ++I+G K K A+ L
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+ +R+I G P + Y+T++ +F + K L++ + PN+ T+N LI
Sbjct: 101 FKRMREIFG--CEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKM 158
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
C ++A LD M + P+ ++++ +++ L K GK + M ++GV P+
Sbjct: 159 SCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPD 218
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQ-SGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
V YN L+DG+ + A ++ + + + S V P+V+ + ++I+GL K VD+ L +
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW 278
Query: 181 SLQK 184
K
Sbjct: 279 ERMK 282
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 94.4 bits (233), Expect = 5e-20, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 9/179 (5%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
++ +RK +L+ P ++ ++ F +V A ++ EM P+ + F L+
Sbjct: 170 IEEMRKENPQLIEPE--LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDA 227
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
C G +K+A L ++M M+ N F LL G C+ GK VL M + G +P+
Sbjct: 228 LCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPD 286
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+V Y +L+ GY G++ A D+L M + G P+ CYTV+I LCK+ ++EA+ +
Sbjct: 287 IVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVF 345
Score = 80.5 bits (197), Expect = 7e-16, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 91/172 (52%), Gaps = 6/172 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + LLR + + PN Y+ +I + CK + +A ++ EM +V T+
Sbjct: 301 GKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY 360
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTF-NILLDGLCKEG-----KVLAVMMK 115
+L+ GFC G + + +LD+MI K + P+ T+ +I++ KE +++ M +
Sbjct: 361 TALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ 420
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
P++ YN ++ C +GEV +A + N M ++G++P V + ++INGL
Sbjct: 421 IEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Score = 80.5 bits (197), Expect = 7e-16, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V Y+ ++ + ++DA+DL +M + PN + LI C V ++EA+ +
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM + + T+ L+ G CK GK VL M+K+G+ P+ +TY +M +
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+ +++ M Q PD+ Y V+I CK+ V EA+ L
Sbjct: 405 KESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ ++ ++ + CK V DA L+ +M R N+ F SL+YG+C VG + EA +
Sbjct: 216 PDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYV 274
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
L +M +P+ + LL G GK +L M ++G +PN Y L+ C
Sbjct: 275 LVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCK 334
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
V + +A + M + DV YT +++G CK +D+ +L
Sbjct: 335 VDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Score = 47.0 bits (110), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K +MP+ + Y I+ + K + + +L +M P++ +N +I C +G +KE
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 445
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL 110
A+ L +EM + P TF I+++GL +G +L
Sbjct: 446 AVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL 479
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 93.6 bits (231), Expect = 7e-20, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 97/182 (53%), Gaps = 6/182 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q ++++L ++ V N Y+ I+ + AF+ ++ + + + ++FT+
Sbjct: 639 QMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYE 698
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQ 116
+L+ C G ++ A+++ EM +NI N++ +NIL+DG + G V + M K+
Sbjct: 699 ALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE 758
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
GVKP++ TY S + G++N+A + M GV P+++ YT +I G + + ++A
Sbjct: 759 GVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKA 818
Query: 177 LT 178
L+
Sbjct: 819 LS 820
Score = 85.5 bits (210), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 93/176 (52%), Gaps = 6/176 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ +L++ R ++ + V N+ YS +I F K K ++AF ++ +M+ + + P+V
Sbjct: 497 VGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVIL 556
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+N++I FC +G + AI + EM P TF ++ G K G +V +M
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
+ G P V T+N L++G ++ KA +IL+ M +GV+ + YT I+ G +
Sbjct: 617 RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASV 672
Score = 77.4 bits (189), Expect = 6e-15, Method: Composition-based stats.
Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILP--NVFTFNSL 64
+L +RK++ + + ++V YS I+G F K A + E AKRI N + +
Sbjct: 363 ALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE--AKRIHKTLNASIYGKI 420
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVLAVMMKQ-GV 118
IY C ++ A +L+ EM + ID ++ ++DG K+G V+ +K+ G
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF 480
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIK 171
P VVTY L++ Y VG+++KA ++ M + GV +++ Y+++ING K+K
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533
Score = 73.6 bits (179), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 6/182 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G T + + +++ + + ++ Y ++ + CK + A + EM A+ I N F
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+N LI G+ G + EA L+ +M + + P+ +T+ + K G + + M
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
GVKPN+ TY +L+ G+ KA M G+ PD Y ++ L +
Sbjct: 792 ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIA 851
Query: 175 EA 176
EA
Sbjct: 852 EA 853
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 41/210 (19%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
MG ++Q +++++ P + II + K + + +++ M +P V T
Sbjct: 567 MGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIM---------------------------------- 86
FN LI G +++A+ +LDEM +
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 87 -KNIDPNAYTFNILLDGLCKEGKV---LAV---MMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ +D + +T+ LL CK G++ LAV M + + N YN L+DG+ G+V
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+A D++ M + GV PD+ YT I+ K
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Score = 63.5 bits (153), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N +Y II + C+ + A L EM + I + +++++ G+ +V K+ + +
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLV 135
+ P T+ L++ K GK V VM ++GVK N+ TY+ +++G+ +
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL-TLLSLQK 184
+ A + M + G+ PDV Y II+ C + +D A+ T+ +QK
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK 582
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 87/181 (48%), Gaps = 6/181 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
L+R++E + + + +Y T++ + ++ + P V T+ LI +
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAVMMKQGVKPNVV 123
VG + +A+ + M + + N T++++++G K V M+K+G+KP+V+
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQ 183
YN+++ +C +G +++A + M + P + + II+G K + +L + +
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 184 K 184
+
Sbjct: 616 R 616
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 57/117 (48%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + L+++++ + V P++ Y++ I + K ++ A EM A + PN+ T+
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQGV 118
+LI G+ L ++A+S +EM I P+ ++ LL L + + GV
Sbjct: 803 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGV 859
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G ++QL+ K+E N V Y+ ++ C ++ + ++ K + PN FT+
Sbjct: 155 GNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTY 214
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------K 115
+ L+ EA+ LLDE+I+K +PN ++N+LL G CKEG+ M
Sbjct: 215 SFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPA 274
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G K NVV+YN L+ C G +A +L M P V Y ++IN L ++
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Query: 176 ALTLL 180
AL +L
Sbjct: 335 ALQVL 339
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 90/169 (53%), Gaps = 6/169 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
++P+ Y+ ++ CK V A L +M N T+N+L+ G C++G L +++
Sbjct: 137 IIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSL 196
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
++ ++ K + PNA+T++ LL+ KE K+L ++ +G +PN+V+YN L+ G+
Sbjct: 197 QFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGF 256
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C G + A + + G +V Y +++ LC +EA +LL+
Sbjct: 257 CKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLA 305
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 8/182 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G SLQ + ++ K + PN YS ++ + K++ +A L E++ K PN+ +
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVS 248
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
+N L+ GFC G +A++L E+ K N ++NILL LC +G+ +LA M
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQC--YTVIINGLCKIKM 172
P+VVTYN L++ G +A +L M++ V Y +I LCK
Sbjct: 309 GGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGK 368
Query: 173 VD 174
VD
Sbjct: 369 VD 370
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 31 GSFCKDKL-----VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
GSF D +SD+F ++ PNV L+Y C LK+AI +++ M+
Sbjct: 74 GSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMV 133
Query: 86 MKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
I P+A + L++ LCK G V + M G N VTYN+L+ G C++G +N
Sbjct: 134 SSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLN 193
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
++ + + Q G+ P+ Y+ ++ K + DEA+ LL
Sbjct: 194 QSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL 234
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 100/257 (38%), Gaps = 78/257 (30%)
Query: 4 TRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNS 63
T +++LL +I K PN+V Y+ ++ FCK+ DA L+ E+ AK NV ++N
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 64 LIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL-------------------- 103
L+ C G +EA SLL EM + P+ T+NIL++ L
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 104 -----------------CKEGKV------LAVMMKQGVKPNVVTYN-------------- 126
CKEGKV L M+ + KPN TYN
Sbjct: 347 HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQE 406
Query: 127 ---------------------SLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
S++ C G A +L M + G PD Y+ +I
Sbjct: 407 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 466
Query: 166 GLCKIKMVDEALTLLSL 182
GLC M A+ +LS+
Sbjct: 467 GLCLEGMFTGAMEVLSI 483
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PNV + ++ CK + A + M++ I+P+ + L+ C G + A+ L
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
+++M N T+N L+ GLC G + + +M++G+ PN TY+ L++
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
++A +L+ + G P++ Y V++ G CK D+A+ L
Sbjct: 224 ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALF 269
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 47/230 (20%)
Query: 2 GQTRASLQLLRKIE--GKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVF 59
G+T +LQ+L+++ Y+ +I CK+ V EM+ +R PN
Sbjct: 330 GRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEG 389
Query: 60 TFN-----------------------------------SLIYGFCIVGLLKEAISLLDEM 84
T+N S+I C G A LL EM
Sbjct: 390 TYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEM 449
Query: 85 IMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK-QGVKPNVVTYNSLMDGYCLVGE 137
DP+A+T++ L+ GLC EG +VL++M + + KP V +N+++ G C +
Sbjct: 450 TRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRR 509
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLC---KIKMVDEALTLLSLQK 184
+ A ++ M + P+ Y +++ G+ ++++ E L L L+K
Sbjct: 510 TDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRK 559
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ Y++ I C+ K V AF ++ EM N ++ LIYG + EA+SL
Sbjct: 188 PDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSL 247
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
L +M N PN T+ +L+D LC G+ + M + G+KP+ Y L+ +C
Sbjct: 248 LVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCS 307
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+++A +L M ++G+ P+V Y +I G CK K V +A+ LLS
Sbjct: 308 GDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLS 353
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 86/155 (55%), Gaps = 5/155 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L LL K++ PNV Y+ +I + C S+A +L+ +M I P+ + LI
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG-----KVLAVMMKQGVKPN 121
FC L EA LL+ M+ + PN T+N L+ G CK+ +L+ M++Q + P+
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLVPD 363
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD 156
++TYN+L+ G C G ++ A +L+ M +SG+ P+
Sbjct: 364 LITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+ ++ S + LV + LY+EML + P+++TFN+L+ G+C +G + EA + +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 86 MKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
DP+ +T+ + G C+ KV M + G N V+Y L+ G +++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+A +L M P+V+ YTV+I+ LC EA+ L
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLF 283
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 13/165 (7%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N V + + FC+ D+F++ ++ K +N+L+ GL++E L
Sbjct: 91 NSVRDALFVVDFCRTMRKGDSFEIKYKLTPK-------CYNNLLSSLARFGLVEEMKRLY 143
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLV 135
EM+ + P+ YTFN L++G CK G V+ +++ G P+ TY S + G+C
Sbjct: 144 TEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRR 203
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
EV+ A + M Q+G + YT +I GL + K +DEAL+LL
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLL 248
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Query: 18 LVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEA 77
LV P++ ++T++ +CK V +A + ++ P+ FT+ S I G C + A
Sbjct: 150 LVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAA 209
Query: 78 ISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDG 131
+ EM N ++ L+ GL + K+ L M PNV TY L+D
Sbjct: 210 FKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDA 269
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C G+ ++A ++ M++SG+ PD YTV+I C +DEA LL
Sbjct: 270 LCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL 318
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
GQ ++ L +++ + P+ MY+ +I SFC + +A L ML ++PNV T+
Sbjct: 274 GQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITY 333
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+LI GFC + K A+ LL +M+ +N+ P+ T+N L+ G C G ++L++M +
Sbjct: 334 NALIKGFCKKNVHK-AMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEE 392
Query: 116 QGVKPNVVT 124
G+ PN T
Sbjct: 393 SGLVPNQRT 401
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 93.2 bits (230), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 10/186 (5%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+LL+ ++ V PN V+Y+T++ + CK+ V A L SEM PN TFN LI
Sbjct: 202 FKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISA 257
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPN 121
+C L +++ LL++ P+ T +++ LC EG+V L + +G K +
Sbjct: 258 YCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVD 317
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
VV N+L+ GYC +G++ A+ M + G P+V+ Y ++I G C + M+D AL +
Sbjct: 318 VVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFN 377
Query: 182 LQKWTA 187
K A
Sbjct: 378 DMKTDA 383
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L+ L K+E + P V S + S C+ + D Y +M+ + +P++ + LI+
Sbjct: 444 ALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIH 501
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL------AVMMKQGVKP 120
+ G ++E++ L+++M+ + P + TFN ++ G CK+ KV+ M ++G P
Sbjct: 502 RYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVP 561
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII 164
+ +YN L++ C+ G++ KA + + M + + PD ++ ++
Sbjct: 562 DTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 7/166 (4%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAK-RILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
Y + C + + L EM + P+ F ++I GF L+K IS++D +
Sbjct: 79 YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLV 138
Query: 85 IMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEV 138
I P+ FN +LD L KE +A MM G+ +V TY LM G L +
Sbjct: 139 SKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRI 198
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+L M SGV P+ Y +++ LCK V A +L+S K
Sbjct: 199 GDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK 244
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
S+ LL K +P+VV + ++ C + VS+A ++ + +K +V N+L+
Sbjct: 267 SMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVK 326
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKP 120
G+C +G ++ A EM K PN T+N+L+ G C G + + M ++
Sbjct: 327 GYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRW 386
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVT--PDVQCYTVIINGLCKIKMVDEALT 178
N T+N+L+ G + G + IL M S + Y +I G K ++AL
Sbjct: 387 NFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALE 446
Query: 179 LL 180
L
Sbjct: 447 FL 448
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ R + + ++E K +PNV Y+ +I +C ++ A D +++M I N T
Sbjct: 331 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT 390
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMI----------------------------------- 85
FN+LI G I G + + +L+ M
Sbjct: 391 FNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLK 450
Query: 86 MKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
M+ + P A + L LC++G M+ +G P+++ + L+ Y G++
Sbjct: 451 MEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIE 510
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
++ +++N M G P + +I G CK
Sbjct: 511 ESLELINDMVTRGYLPRSSTFNAVIIGFCK 540
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ ++ TII F + +L+ + + I P++ FNS++ L+KE I +
Sbjct: 110 PDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILD-----VLVKEDIDI 164
Query: 81 LDE-----MIMKNIDPNAYTFNILLDGLC-----KEG-KVLAVMMKQGVKPNVVTYNSLM 129
E M+ I + YT+ IL+ GL +G K+L +M GV PN V YN+L+
Sbjct: 165 AREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLL 224
Query: 130 DGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C G+V +A+ +++ M + P+ + ++I+ C + + +++ LL
Sbjct: 225 HALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLE 272
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L++L ++E K +VV +T++ +C + A + EM K LPNV T+
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
N LI G+C VG+L A+ ++M I N TFN L+ GL G+
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGR 403
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 16 GKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLK 75
G+ +P++++ +I + + + ++ +L ++M+ + LP TFN++I GFC +
Sbjct: 486 GEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVM 545
Query: 76 EAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLM 129
I +++M + P+ ++N LL+ LC +G + + M+++ + P+ ++SLM
Sbjct: 546 NGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Query: 130 DGYCL 134
+CL
Sbjct: 606 --FCL 608
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 18/192 (9%)
Query: 2 GQTRASLQLLR------KIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL 55
G+T L++L + G + P Y+ +I F K+ DA + +M +++
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDP----YNCVIYGFYKENRWEDALEFLLKM--EKLF 455
Query: 56 PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------ 109
P + + C G + + + D+MI + P+ + L+ + GK+
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLEL 515
Query: 110 LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+ M+ +G P T+N+++ G+C +V + MA+ G PD + Y ++ LC
Sbjct: 516 INDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCV 575
Query: 170 IKMVDEALTLLS 181
+ +A L S
Sbjct: 576 KGDIQKAWLLFS 587
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 93.2 bits (230), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 42/222 (18%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+T + +LL K+E + + PNVV Y+ ++ C+ K + A ++S +L K + PN +T+
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
+ LI G + A+ +++ M NI+ N + +++GLCK G+ +LA M++
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 116 Q------------------------------------GVKPNVVTYNSLMDGYCLVGEVN 139
+ G+ PNV+TY SLM+G C ++
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+A ++ + M GV D+ Y +I+G CK ++ A L S
Sbjct: 637 QALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFS 678
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 7/176 (3%)
Query: 1 MGQTRASLQLLRK-IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVF 59
+GQT + +LL IE K + + + Y++II F K+ + A Y EM I PNV
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVM 113
T+ SL+ G C + +A+ + DEM K + + + L+DG CK + + +
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+++G+ P+ YNSL+ G+ +G + A D+ M + G+ D+ YT +I+GL K
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L+ +K+E + P+V TII + K + +A L+ E + L NVF
Sbjct: 388 GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESF-ETGLANVFVC 446
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N+++ C G EA LL +M + I PN ++N ++ G C++ V + +++
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+KPN TY+ L+DG + A +++N M S + + Y IINGLCK+ +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 176 ALTLLS 181
A LL+
Sbjct: 567 ARELLA 572
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 94/167 (56%), Gaps = 7/167 (4%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
++L L K+E + PN V +S +I F K+ + A + Y +M + P+VF +++I
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVK 119
G+ +EA+ L DE + N + N +L LCK+GK +L+ M +G+
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
PNVV+YN++M G+C ++ A+ + +++ + G+ P+ Y+++I+G
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 100/202 (49%), Gaps = 42/202 (20%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+ NV + +TI+ CK +A +L S+M ++ I PNV ++N+++ G C + A
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI 499
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYC 133
+ ++ K + PN YT++IL+DG + +V+ M ++ N V Y ++++G C
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 134 LVGEVNKAKDILNSMAQ------------------------------------SGVTPDV 157
VG+ +KA+++L +M + +G++P+V
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 158 QCYTVIINGLCKIKMVDEALTL 179
YT ++NGLCK +D+AL +
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEM 641
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEML-AKRILPNVFTFNSLI 65
+L+++ + + N V+Y TII CK S A +L + M+ KR+ + ++NS+I
Sbjct: 532 ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSII 591
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVK 119
GF G + A++ +EM I PN T+ L++GLCK ++ M +GVK
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
++ Y +L+DG+C + A + + + + G+ P Y +I+G + + AL L
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 6/179 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L++ +++ K V ++ Y +I FCK + A L+SE+L + + P+ +NSLI
Sbjct: 638 ALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS 697
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL------AVMMKQGVKP 120
GF +G + A+ L +M+ + + T+ L+DGL K+G ++ M G+ P
Sbjct: 698 GFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVP 757
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+ + Y +++G G+ K + M ++ VTP+V Y +I G + +DEA L
Sbjct: 758 DEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 7/181 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRI-LPNVFTFNSLI 65
+L++L + + P+ ++YS + + CK ++ A L EM K++ +P+ T+ S+I
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVK 119
G + +AI L DEM+ I N L+ G CK +++ M K+G
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
PN VT++ L++ + GE+ KA + M G+TP V II G K + +EAL L
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 180 L 180
Sbjct: 432 F 432
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 10 LLRKI-EGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
LLR++ E KL +P+ Y+++I + K + DA L EML+ I NV SLI G
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG---KVLAVMMKQ---GVKPNV 122
C L A+ L D+M + PN+ TF++L++ K G K L K G+ P+V
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
++++ G+ + +A + + ++G+ C T I++ LCK DEA LLS
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNT-ILSWLCKQGKTDEATELLS 467
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+L +++ ++P+ ++Y+ I+ K ++ EM + PNV +N++I G
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG 102
G L EA L DEM+ K I P+ TF+IL+ G
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N ++ ++ ++ KD+ A D+ ++ML ++P N + L EA L
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELY 221
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLV 135
M+ +D + T +L+ +E K VL+ +++G +P+ + Y+ + C
Sbjct: 222 SRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKT 281
Query: 136 GEVNKAKDILNSMAQSGV-TPDVQCYTVIINGLCKIKMVDEALTL 179
++ A +L M + + P + YT +I K +D+A+ L
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 92.8 bits (229), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ PN ++ + FC D + D +M + P++ T+N+L+ +C G LKEA
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
L M + + P+ T+ L+ GLCK+G+V M+ +G+KP+ ++YN+L+ Y
Sbjct: 292 YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAY 351
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
C G + ++K +L+ M + V PD VI+ G +
Sbjct: 352 CKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVR 388
Score = 85.1 bits (209), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Query: 39 VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNI 98
+ D + +YS M I PN +TFN L FC +E L++M + +P+ T+N
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 99 LLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
L+ C+ G+ + +M ++ V P++VTY SL+ G C G V +A + M G
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ PD Y +I CK M+ ++ LL
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLL 364
Score = 83.6 bits (205), Expect = 7e-17, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
L K+E + P++V Y+T++ S+C+ + +AF LY M +R++P++ T+ SLI G C
Sbjct: 258 FLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLC 317
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVV 123
G ++EA M+ + I P+ ++N L+ CKEG K+L M+ V P+
Sbjct: 318 KDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
T +++G+ G + A + + + + V + +I LC+
Sbjct: 378 TCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQ 423
Score = 82.8 bits (203), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/187 (25%), Positives = 101/187 (54%), Gaps = 11/187 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + L + + + V+P++V Y+++I CKD V +A + M+ + I P+ ++
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-------- 113
N+LIY +C G+++++ LL EM+ ++ P+ +T ++++G +EG++L+ +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNS-MAQSGVTPDVQCYTVIINGLCKIKM 172
+K + V + L+ C G+ AK +L+ + + G + Y +I L +
Sbjct: 405 LKVDIPFEVCDF--LIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDA 462
Query: 173 VDEALTL 179
++EAL L
Sbjct: 463 IEEALVL 469
Score = 77.8 bits (190), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
V++ ++ + K LV + F ++ E+L +V T N L+ G + L+++ +
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSV 226
Query: 84 MIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGE 137
M I PN YTFNIL + C + V M ++G +P++VTYN+L+ YC G
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ +A + M + V PD+ YT +I GLCK V EA
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREA 325
Score = 50.4 bits (119), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
F+ L+ G+ +GL++E + E++ + T N LL+GL K +V +VM
Sbjct: 169 FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMC 228
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ G+ PN T+N L + +C + D L M + G PD+ Y +++ C+ +
Sbjct: 229 RVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLK 288
Query: 175 EALTLLSL 182
EA L +
Sbjct: 289 EAFYLYKI 296
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 2 GQTRASLQLLRKI---EGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNV 58
G+ A+ LL +I EG P Y+ +I S + + +A L ++ + + +
Sbjct: 425 GKPFAAKHLLDRIIEEEGHEAKPET--YNNLIESLSRCDAIEEALVLKGKLKNQNQVLDA 482
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAV 112
T+ +LI C +G +EA SL+ EM + P+++ L+ G CKE ++L++
Sbjct: 483 KTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSL 542
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVG-EVNKAKDILNSMAQSGVTPD 156
+ + +YNSL+ C G KA ++ M + G P+
Sbjct: 543 FAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPN 587
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 101/199 (50%), Gaps = 19/199 (9%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L+K+ V P M +IG+FCK V +A L+ M+ + ++P++FT+
Sbjct: 570 GYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTY 629
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD-------------------G 102
+I+ +C + L++A SL ++M + I P+ T+ +LLD G
Sbjct: 630 TIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVG 689
Query: 103 LCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTV 162
K +VL G+ +VV Y L+D C + + +A ++ + M SG+ PD+ YT
Sbjct: 690 KRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTT 749
Query: 163 IINGLCKIKMVDEALTLLS 181
+I+ + +D A+TL++
Sbjct: 750 LISSYFRKGYIDMAVTLVT 768
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 84/150 (56%), Gaps = 6/150 (4%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L+ ++ + + V Y+ + K V +AF+L EM + I+P+V + +LI
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLID 431
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
G+C+ G + +A+ L+DEMI + P+ T+N+L+ GL + G ++ M +G KP
Sbjct: 432 GYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKP 491
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQ 150
N VT + +++G C +V +A+D +S+ Q
Sbjct: 492 NAVTNSVIIEGLCFARKVKEAEDFFSSLEQ 521
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
+Y + S C + + A D+ +M A R+ P +I FC + ++EA L D M
Sbjct: 558 VYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Query: 85 IMKNIDPNAYTFNILLDGLC------KEGKVLAVMMKQGVKPNVVTYNSLMDGY------ 132
+ + + P+ +T+ I++ C K + M ++G+KP+VVTY L+D Y
Sbjct: 618 VERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPE 677
Query: 133 ----CLV-GEV--NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C V GEV KA ++L + +G+ DV CYTV+I+ CK+ +++A L
Sbjct: 678 HHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELF 732
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L L K+ GK + N V+ S I+ +CK + +A + + E I + +N
Sbjct: 337 ALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFD 396
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKP 120
+G ++EA LL EM + I P+ + L+DG C +GKV+ M+ G+ P
Sbjct: 397 ALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSP 456
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+++TYN L+ G G + +I M G P+ +VII GLC + V EA
Sbjct: 457 DLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFF 516
Query: 181 S 181
S
Sbjct: 517 S 517
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 34/214 (15%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + +LL++++ + ++P+V+ Y+T+I +C V DA DL EM+ + P++ T
Sbjct: 401 LGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLIT 460
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVLAVMMK 115
+N L+ G G +E + + + M + PNA T +++++GLC KE + ++
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE 520
Query: 116 QGVKPNVVT-----------------------------YNSLMDGYCLVGEVNKAKDILN 146
Q N + Y L C+ G + KA D+L
Sbjct: 521 QKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLK 580
Query: 147 SMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
M+ V P +I CK+ V EA L
Sbjct: 581 KMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLF 614
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 28 TIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMK 87
+I +CK+ + +A +ML K + N + ++ +C + + EA+ E
Sbjct: 323 AVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDM 382
Query: 88 NIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKA 141
NI + +N+ D L K G+V L M +G+ P+V+ Y +L+DGYCL G+V A
Sbjct: 383 NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDA 442
Query: 142 KDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
D+++ M +G++PD+ Y V+++GL + +E L + K
Sbjct: 443 LDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 9/184 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G L++ +++ + PN V S II C + V +A D +S L ++ N +F
Sbjct: 472 GHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSS-LEQKCPENKASF 530
Query: 62 NSLIYGFCIVGLLKEAISL---LDEMIMKNIDPNAYTFNILLDG-LCKEGKVLAVMMKQG 117
+ G+C GL K+A L+ + K++ + F++ ++G L K VL M
Sbjct: 531 ---VKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLF-FSLCIEGYLEKAHDVLKKMSAYR 586
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
V+P ++ +C + V +A+ + ++M + G+ PD+ YT++I+ C++ + +A
Sbjct: 587 VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAE 646
Query: 178 TLLS 181
+L
Sbjct: 647 SLFE 650
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + + +++ + + +V + +G + + +Y EM + + NV TF
Sbjct: 162 GDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTF 221
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV---LAVMMKQG- 117
N +IY FC L EA+S+ M+ + PN +FN+++DG CK G + L ++ K G
Sbjct: 222 NLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGM 281
Query: 118 -----VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
V PN VTYNS+++G+C G ++ A+ I M +SGV + + Y +++ +
Sbjct: 282 MSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGS 341
Query: 173 VDEALTL 179
DEAL L
Sbjct: 342 SDEALRL 348
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+ NV ++ +I SFCK+ + +A ++ ML + PNV +FN +I G C G ++ A+
Sbjct: 215 VENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQ 274
Query: 80 LLDEMIMKN---IDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMD 130
LL +M M + + PNA T+N +++G CK G+ + M+K GV N TY +L+D
Sbjct: 275 LLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVD 334
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
Y G ++A + + M G+ + Y I+ L ++ A+++L
Sbjct: 335 AYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 98/186 (52%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +++ R+I K ++ ++V ++T++ F +DK ++ A + ML + + + +F
Sbjct: 410 GYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISF 469
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE---GKVLAVMMKQGV 118
+LI G+ G L+ A+ + D MI N N +N +++GL K G AV+ +
Sbjct: 470 GTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI 529
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ--CYTVIINGLCKIKMVDEA 176
K ++VTYN+L++ G V +A DIL+ M + V + ++IN LCK ++A
Sbjct: 530 K-DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKA 588
Query: 177 LTLLSL 182
+L
Sbjct: 589 KEVLKF 594
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 79/254 (31%)
Query: 2 GQTRASLQLLRKI---EGKLVMPNVVMYSTIIGSFCK-------DKLVSD---------- 41
G R +LQLL K+ G V PN V Y+++I FCK +++ D
Sbjct: 267 GDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNE 326
Query: 42 ------------------AFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
A L EM +K ++ N +NS++Y + G ++ A+S+L +
Sbjct: 327 RTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRD 386
Query: 84 MIMKNIDPNAYTFNILLDGLCKEG------------------------------------ 107
M KN+ + +T I++ GLC+ G
Sbjct: 387 MNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKK 446
Query: 108 -----KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTV 162
++L M+ QG+ + +++ +L+DGY G++ +A +I + M + T ++ Y
Sbjct: 447 LACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNS 506
Query: 163 IINGLCKIKMVDEA 176
I+NGL K M A
Sbjct: 507 IVNGLSKRGMAGAA 520
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G ++ +LR + K + + + ++ C++ V +A + ++ K+++ ++
Sbjct: 375 GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCH 434
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N+L++ F L A +L M+++ + +A +F L+DG KEGK+ M+K
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
N+V YNS+++G G A+ ++N+M D+ Y ++N K V+E
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEE 550
Query: 176 ALTLLS-LQK 184
A +LS +QK
Sbjct: 551 ADDILSKMQK 560
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
N+V+Y++I+ K + A + + M K I+ T+N+L+ G ++EA +
Sbjct: 499 SNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV----TYNTLLNESLKTGNVEEADDI 554
Query: 81 LDEMIMKNIDPNAY--TFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
L +M ++ + + TFNI+++ LCK G +VL M+++GV P+ +TY +L+ +
Sbjct: 555 LSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
K ++ + + GVTP Y I+ L
Sbjct: 615 SKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPL 649
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ + ++ +E + PN V Y +I + CK+K +A +++ EML + +P+
Sbjct: 274 LGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-----MK 115
+I C + EA L +M+ N P+ + L+ LCKEG+V +
Sbjct: 334 CCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE 393
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G P+++TYN+L+ G C GE+ +A + + M + P+ Y V+I GL K V E
Sbjct: 394 KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKE 453
Query: 176 AL----TLLSLQKWTAKTLFLI 193
+ +L + + KT FLI
Sbjct: 454 GVRVLEEMLEIGCFPNKTTFLI 475
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ PN+ + ++ + CK + A+ + E+ + ++PN+ T+ +++ G+ G ++ A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
+L+EM+ + P+A T+ +L+DG CK G+ V+ M K ++PN VTY ++
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
C + +A+++ + M + PD +I+ LC+ VDEA L
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGL 353
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
MP+ + +I + C+D V +A L+ +ML +P+ ++LI+ C G + EA
Sbjct: 328 MPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARK 387
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYC 133
L DE +I P+ T+N L+ G+C++G++ M ++ KPN TYN L++G
Sbjct: 388 LFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLS 446
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
G V + +L M + G P+ + ++ GL K+ ++A+ ++S+
Sbjct: 447 KNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSM 495
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
++ ++L +I ++PN+V Y+TI+G + + A + EML + P+ T+ L+
Sbjct: 209 SAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLM 268
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVK 119
G+C +G EA +++D+M I+PN T+ +++ LCKE K + M+++
Sbjct: 269 DGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFM 328
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
P+ ++D C +V++A + M ++ PD + +I+ LCK V EA L
Sbjct: 329 PDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKL 388
Query: 180 L 180
Sbjct: 389 F 389
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
L RK+ MP+ + ST+I CK+ V++A L+ E K +P++ T+N+LI G C
Sbjct: 353 LWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMC 411
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVV 123
G L EA L D+M + PNA+T+N+L++GL K G +VL M++ G PN
Sbjct: 412 EKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKT 471
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
T+ L +G +G+ A I++ +G
Sbjct: 472 TFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 89 IDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAK 142
I PN +T N+L+ LCK+ KVL + G+ PN+VTY +++ GY G++ AK
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 143 DILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+L M G PD YTV+++G CK+ EA T++
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVM 284
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 91/168 (54%), Gaps = 6/168 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P V+ Y+ +I CK +L+S A D + +ML ++ LP++ T+N+++ G++ +AI L
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
L + P T+N ++DGL K+G ++ M+ G+ P+ +T SL+ G+C
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
V +A +L + G Y ++I GLCK K ++ A+ ++ +
Sbjct: 467 ANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEI 514
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N V Y+T++ S C + + ++ + M P V T+N LI G C LL AI
Sbjct: 313 NTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFF 372
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLV 135
+M+ + P+ T+N +L + KEG V L ++ P ++TYNS++DG
Sbjct: 373 YQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKK 432
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G + KA ++ + M +G+ PD +I G C+ +V+EA +L
Sbjct: 433 GLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVL 477
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P ++ Y+ ++ C+ + A ++ +M + P++ T+NSL+ C G L+E S+
Sbjct: 242 PFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASV 301
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
+ ++ ++ N T+N LL LC ++L +M + P V+TYN L++G C
Sbjct: 302 IQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCK 361
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWT 186
+++A D M + PD+ Y ++ + K MVD+A+ LL L K T
Sbjct: 362 ARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNT 413
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G R +L LL + P+V+ Y+T+I A + + L P + T+
Sbjct: 188 GHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITY 247
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
L+ C AI +L++M ++ P+ T+N L++ C+ G V+ ++
Sbjct: 248 TVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILS 307
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G++ N VTYN+L+ C ++ ++ILN M Q+ P V Y ++INGLCK +++
Sbjct: 308 HGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSR 367
Query: 176 ALTLL 180
A+
Sbjct: 368 AIDFF 372
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 84/164 (51%), Gaps = 6/164 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P++V Y+T++G+ K+ +V DA +L + P + T+NS+I G GL+K+A+
Sbjct: 381 LPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALE 440
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAVMMKQGVKPNVVTYNSLMDGYC 133
L +M+ I P+ T L+ G C+ G+VL +G TY ++ G C
Sbjct: 441 LYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLC 500
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
E+ A +++ M G PD YT I+ G+ ++ M EA+
Sbjct: 501 KKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +++LL ++ P ++ Y+++I K L+ A +LY +ML I P+ T
Sbjct: 398 GMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITR 457
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
SLIYGFC L++EA +L E + T+ +++ GLCK+ +V+ +M+
Sbjct: 458 RSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLT 517
Query: 116 QGVKPNVVTYNSLMDG 131
G KP+ Y +++ G
Sbjct: 518 GGCKPDETIYTAIVKG 533
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Query: 27 STIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIM 86
+ I+ + C + ++DA L M +P+ + ++L+ G + L +A+ +L M+M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 87 KNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
P+ T+N+++ LCK+G + L M G P+V+TYN+++ G +
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCK 169
A Q+G P + YTV++ +C+
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCR 256
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
Query: 55 LPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM- 113
+P+ T+N +I C G ++ A+ LL++M + P+ T+N ++ + G +
Sbjct: 171 VPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIR 230
Query: 114 -----MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
++ G P ++TY L++ C +A ++L MA G PD+ Y ++N C
Sbjct: 231 FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNC 290
Query: 169 KIKMVDEALTLL 180
+ ++E +++
Sbjct: 291 RRGNLEEVASVI 302
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVM 113
T N +++ C G L +A L++ M N P+ + + L+ GL + + +L VM
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+ G P+ +TYN ++ C G + A +L M+ SG PDV Y +I +
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 174 DEALTLLSLQKWTAKTLFLI 193
++A+ Q F+I
Sbjct: 226 EQAIRFWKDQLQNGCPPFMI 245
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+VV YST+I +FC+ A+ L+ EM K ++ NV T+ SLI F G A LL
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLV 135
D+M + P+ + +LD LCK G V M++ + P+ ++YNSL+ G C
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G V +A + M PD + II GL + K + A
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAA 484
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 10/171 (5%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEM--LAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
Y+ IG ++ A +Y +M + ++P FT++ I G C V +LL +
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSD 104
Query: 84 MIMKNIDPNAYTFNILLDGLCKEGKV-LAV-----MMKQGVKPNVVTYNSLMDGYCLVGE 137
M P+ + FN+ LD LC+E KV AV M+++G +P+VV+Y L++G G+
Sbjct: 105 METLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGK 164
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTAK 188
V A +I N+M +SGV+PD + ++ GLC + VD A +++ + +A+
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSAR 215
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 17/191 (8%)
Query: 9 QLLRKIEGKLVMPNVVM---------YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVF 59
+L++ EG VM +V Y+ ++ C+ ++ + + R +V
Sbjct: 269 NMLKRAEG--VMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVV 326
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVM 113
++++LI FC ++A L +EM K + N T+ L+ +EG K+L M
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+ G+ P+ + Y +++D C G V+KA + N M + +TPD Y +I+GLC+ V
Sbjct: 387 TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRV 446
Query: 174 DEALTLLSLQK 184
EA+ L K
Sbjct: 447 TEAIKLFEDMK 457
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 13 KIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVG 72
+I+ V + V+Y+ +I FCK + A L S M P++ T+N L+ +
Sbjct: 210 EIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNN 269
Query: 73 LLKEAISLLDEMIMKNIDPNAYTFNILLDGLC---------------------------- 104
+LK A ++ EM+ I +AY++N LL C
Sbjct: 270 MLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYS 329
Query: 105 -------------KEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQS 151
K ++ M ++G+ NVVTY SL+ + G + AK +L+ M +
Sbjct: 330 TLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL 389
Query: 152 GVTPDVQCYTVIINGLCKIKMVDEA 176
G++PD YT I++ LCK VD+A
Sbjct: 390 GLSPDRIFYTTILDHLCKSGNVDKA 414
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
LL +E +P++ ++ + C++ V A + M+ + P+V ++ LI G
Sbjct: 101 LLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-LAVMM------KQGVKPNV 122
G + +A+ + + MI + P+ L+ GLC KV LA M VK +
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLST 220
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
V YN+L+ G+C G + KA+ + + M++ G PD+ Y V++N
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLN 263
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 6/138 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + + +LL ++ + P+ + Y+TI+ CK V A+ ++++M+ I P+ ++
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
NSLI G C G + EAI L ++M K P+ TF ++ GL + K+ A MM
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Query: 116 QGVKPNVVTYNSLMDGYC 133
+G + ++L+ C
Sbjct: 494 KGFTLDRDVSDTLIKASC 511
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 7/167 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+VV Y+ +I + V+DA ++++ M+ + P+ +L+ G C + A +
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEM 206
Query: 81 LDEMIMK-NIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYC 133
+ E I + + +N L+ G CK G++ + M K G +P++VTYN L++ Y
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYY 266
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ +A+ ++ M +SG+ D Y ++ C++ D+ +
Sbjct: 267 DNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM 313
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
TR + +L ++ K ++ NVV Y+++I +F ++ S A L +M + P+ +
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL-AVMMKQGVK-- 119
+++ C G + +A + ++MI I P+A ++N L+ GLC+ G+V A+ + + +K
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 120 ---PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
P+ +T+ ++ G +++ A + + M G T D +I C +
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 6/175 (3%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
R++ + P+V Y+++I K+ +++ L+ EML + P+++++N+L+ + +
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131
Query: 72 GLLKEAISLLDEMI-MKNIDPNAYTFNILLDGLCKEGKV-----LAVMMKQGVKPNVVTY 125
G EA +L E I + + P T+NILLD LCK G L +K VKP ++TY
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTY 191
Query: 126 NSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
N L++G C V ++ + +SG TP+ YT ++ K K +++ L L
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 246
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 88/162 (54%), Gaps = 8/162 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V+P+V+ Y+T+I + + + +A+ + M I P+V T+NSLI G +L +
Sbjct: 44 VLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVL 103
Query: 79 SLLDEMIMKNIDPNAYTFNILLD---GLCKEGKVLAVMMKQ----GVKPNVVTYNSLMDG 131
L DEM+ + P+ +++N L+ L + G+ ++ + G+ P + TYN L+D
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDA 163
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
C G + A ++ + +S V P++ Y ++INGLCK + V
Sbjct: 164 LCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRV 204
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 30 IGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNI 89
+ S CK + + A L + + +LP+V T+N+LI G+ + EA ++ M I
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 90 DPNAYTFNILLDGLCKE---GKVLAV---MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKD 143
+P+ T+N L+ G K +VL + M+ G+ P++ +YN+LM Y +G +A
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 144 ILNS-MAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTAK 188
IL+ + +G+ P + Y ++++ LCK D A+ L K K
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVK 185
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 29 IIGSFCKDKLVSDAFDLYSEMLAKRILP-NVFTFNSLIYGFCIVGLLKEAISLLDEMIMK 87
++ + K +A++ E++ ++ ++N+L+ + G L LL+E+ MK
Sbjct: 264 VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMK 323
Query: 88 NIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKA 141
+ P+ YT I+++GL G K LA + + G++P+VVT N L+DG C G V++A
Sbjct: 324 GLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRA 383
Query: 142 KDILNSMAQSGVTPDVQCYTVIINGLCK 169
+ SM D YT +++ LCK
Sbjct: 384 MRLFASME----VRDEFTYTSVVHNLCK 407
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
++R+++ PN V Y+T++ + K K + L+ +M + + F +++
Sbjct: 210 MMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALI 269
Query: 70 IVGLLKEAISLLDEMIMKNI-DPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNV 122
G +EA + E++ + ++N LL+ K+G + AV + +G+KP+
Sbjct: 270 KTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDD 329
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
T+ +++G +G A+ L + + G+ P V +I+GLCK VD A+ L +
Sbjct: 330 YTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFA 388
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G T +++L + ++ + V P ++ Y+ +I CK + V + E+ PN T+
Sbjct: 168 GHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTY 226
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
+++ + +++ + L +M + + + ++ L K G+ + +++
Sbjct: 227 TTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVR 286
Query: 116 QGVKP-NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
G + ++V+YN+L++ Y G ++ D+L + G+ PD +T+I+NGL I
Sbjct: 287 SGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNI 342
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 96 FNILLDGLCK------EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMA 149
NI ++ LCK +L ++ GV P+V+TYN+L+ GY +++A + M
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 150 QSGVTPDVQCYTVIINGLCKIKMVDEALTL--------LSLQKWTAKTL 190
++G+ PDV Y +I+G K M++ L L LS W+ TL
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 14 IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGL 73
+E + P+V +YS II K+ + A D++++ML KR N +S++ +C +G
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 74 LKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNS 127
EA L E NI + +N+ D L K GKV M +G+ P+V+ Y +
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 128 LMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
L+ G CL G+ + A D++ M +G TPD+ Y V+ GL + EA L +
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKM 491
Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
L + R++E V+P+VV Y+ +I +C + + L+ +M + I+P+V T+ L+
Sbjct: 682 ELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK 741
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
K +L EM ++ P+ + + +L+D CK G ++ M++ GV P
Sbjct: 742 N-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDP 794
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ Y +L+ C +G + +AK I + M +SGV PDV YT +I G C+ V +A+ L+
Sbjct: 795 DAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLV 854
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 10/177 (5%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+ + + + L ++ + V P+VV YS ++ S D+ EM A ++P+V
Sbjct: 648 LNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVY 700
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQ-GVK 119
+ +I +C + LK+ +L +M + I P+ T+ +LL K + L+ MK VK
Sbjct: 701 YTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN--KPERNLSREMKAFDVK 758
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
P+V Y L+D C +G++ +AK I + M +SGV PD YT +I CK+ + EA
Sbjct: 759 PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEA 815
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P MY +IG++C+ V A + + ++ K+I+P++FT+ +I +C + K+A
Sbjct: 596 VEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAY 655
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+L ++M +++ P+ T+++LL+ E + M V P+VV Y +++ YC + ++
Sbjct: 656 ALFEDMKRRDVKPDVVTYSVLLNS-DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDL 714
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVII 164
K + M + + PDV YTV++
Sbjct: 715 KKVYALFKDMKRREIVPDVVTYTVLL 740
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 10/183 (5%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
MG + L ++ + + V Y+ + K V +A +L+ EM K I P+V
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+ +LI G C+ G +A L+ EM P+ +N+L GL G + L +M
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+GVKP VT+N +++G GE++KA+ S+ D ++ G C +D
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MVKGFCAAGCLD 549
Query: 175 EAL 177
A
Sbjct: 550 HAF 552
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N V+ S+I+ +C+ S+A+DL+ E I + +N +G ++EAI L
Sbjct: 360 NCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELF 419
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLV 135
EM K I P+ + L+ G C +GK ++ M G P++V YN L G
Sbjct: 420 REMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATN 479
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G +A + L M GV P + ++I GL +D+A
Sbjct: 480 GLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDK-LVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCI 70
R I + +P V Y T+ S C +K +S A DL M + P + LI +C
Sbjct: 554 RFIRLEFPLPKSV-YFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCR 612
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK--EGK----VLAVMMKQGVKPNVVT 124
V +++A + ++ K I P+ +T+ I+++ C+ E K + M ++ VKP+VVT
Sbjct: 613 VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT 672
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
Y+ L++ + D+ M V PDV YT++IN C +
Sbjct: 673 YSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHL 711
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 88/218 (40%), Gaps = 35/218 (16%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + L+ +++G P++V+Y+ + G + L +AF+ M + + P T
Sbjct: 445 GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTH 504
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNA-------------YTFN----------- 97
N +I G G L +A + + + K+ + +A + F
Sbjct: 505 NMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPK 564
Query: 98 ----ILLDGLCKEGK-------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILN 146
L LC E +L M K GV+P Y L+ +C V V KA++
Sbjct: 565 SVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFE 624
Query: 147 SMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+ + PD+ YT++IN C++ +A L K
Sbjct: 625 ILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMK 662
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNV----FTFNSLIYGFCIVGLLKEAIS 79
V Y I C +++ A+ L + IL + + ++ G C +++A S
Sbjct: 253 VFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAES 312
Query: 80 LLDEMIMKNIDPNAYTFNILLDG------LCKEGKVLAVMMKQGVKPNVVTYNSLMDGYC 133
++ +M IDP+ Y ++ +++G + K V M+K+ + N V +S++ YC
Sbjct: 313 VVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYC 372
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+G ++A D+ ++ ++ D CY V + L K+ V+EA+ L
Sbjct: 373 QMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELF 419
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ + L R+++ V P+V Y+ +I CK + +A ++ +M+ + P+ +
Sbjct: 741 KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYT 800
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQ 116
+LI C +G LKEA + D MI + P+ + L+ G C+ G VL M+++
Sbjct: 801 ALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEK 860
Query: 117 GVKPNVVTYNSL 128
G+KP + +++
Sbjct: 861 GIKPTKASLSAV 872
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 94/186 (50%), Gaps = 7/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L ++R ++ + P +YS ++ ++ + + +A D + EM + +V F
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
NSLI FC +K +L EM K + PN+ + NI+L L + G+ V M+K
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK 405
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+P+ TY ++ +C E+ A + M + GV P + ++V+INGLC+ + +
Sbjct: 406 -VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQK 464
Query: 176 ALTLLS 181
A LL
Sbjct: 465 ACVLLE 470
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+V Y +I S K + +DL + M K++L NV TF ++ + + EAI
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAF 191
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-----MKQGVKPNVVTYNSLMDGYCLVG 136
+ M ++ PN FN LL LCK V M+ P+ TY+ L++G+
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEP 251
Query: 137 EVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ KA+++ M +G PD+ Y+++++ LCK VDEAL ++
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIV 295
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN+V ++ ++ + CK K V A +++ E + R P+ T++ L+ G+ L +A +
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVF-ENMRDRFTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
EMI P+ T++I++D LCK G+V + M KP Y+ L+ Y
Sbjct: 260 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGT 319
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+ +A D M +SG+ DV + +I CK
Sbjct: 320 ENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 354
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 8/172 (4%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
M NV + ++ + + + V +A ++ M + PN+ FN L+ C +++A
Sbjct: 165 MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQE 224
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMKQGVKPNVVTYNSLMDGYC 133
+ + M P++ T++ILL+G KE +V M+ G P++VTY+ ++D C
Sbjct: 225 VFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILC 283
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL-TLLSLQK 184
G V++A I+ SM S P Y+V+++ ++EA+ T L +++
Sbjct: 284 KAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER 335
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V YS ++ CK V +A + M P F ++ L++ + L+EA+
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
EM + + FN L+ CK +VL M +GV PN + N ++
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 389
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
GE ++A D+ M + PD YT++I C+ K ++ A
Sbjct: 390 RGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETA 430
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + RK+ K+ P+ Y+ +I FC+ K + A ++ M K + P++ TF
Sbjct: 391 GEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTF 449
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
+ LI G C ++A LL+EMI I P+ TF L L KE +
Sbjct: 450 SVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 90.5 bits (223), Expect = 7e-19, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 10/173 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + + +L + VMPN Y+ ++ +FC + +S A+ L+ +ML + ++P+V ++
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
LI GFC G + A+ LLD+M+ K P+ L+ GLC +G K L M+
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
+G P+ N L+ G+C G+V +A D++ + ++G T + ++I +C
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 337
Score = 70.9 bits (172), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 42 AFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD 101
AF+L+ ++PN ++N L+ FC+ L A L +M+ +++ P+ ++ IL+
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
Query: 102 GLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTP 155
G C++G+V L M+ +G P+ +L+ G C G ++ K L M G +P
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSP 289
Query: 156 DVQCYTVIINGLCKIKMVDEALTLLSLQKWTAKTL 190
++ G C V+EA ++ + +TL
Sbjct: 290 HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 43 FDLYSEMLAKR------ILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTF 96
F+L ++LAK + +FT+ LI + L ++ +S +M+ N P
Sbjct: 100 FNLIDDVLAKHRSSGYPLTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHL 157
Query: 97 NILLDGLCKEGKVLAVMMK-------QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMA 149
N +LD L L + GV PN +YN LM +CL +++ A + M
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 150 QSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ V PDV Y ++I G C+ V+ A+ LL
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELL 248
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
GQ +++LL + K +P+ T+IG C + + EM++K P+
Sbjct: 239 GQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVS 294
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDP-NAYTFNILLDGLCK--EGKVLAVMMKQGV 118
N L+ GFC G ++EA ++ E++MKN + ++ T+ +++ +C E + + + ++ V
Sbjct: 295 NCLVKGFCSFGKVEEACDVV-EVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAV 353
Query: 119 KPNVVTYNSLMD 130
K + ++D
Sbjct: 354 KEEITGDTRIVD 365
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 90.1 bits (222), Expect = 8e-19, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + + R ++ + + +VV Y+ ++ + K ++ F+L EM + I P+V T+
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N LI+ + G + EA ++ E+I + P+ F ++ G K G M
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+KP+VVT ++L+ GYC + KA + N + +G+ PDV Y +I+G C + +++
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 176 ALTLLSL 182
A L+ L
Sbjct: 637 ACELIGL 643
Score = 85.5 bits (210), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 6/171 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q +L+ ++ + P+V Y+ +I S + +A ++ SE++ + +P+ F
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQ 116
+I GF G +EA L M + P+ T + LL G CK + + ++
Sbjct: 553 DVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDA 612
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
G+KP+VV YN+L+ GYC VG++ KA +++ M Q G+ P+ + ++ GL
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 11/188 (5%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ +++L+ + PN+ +YS+ + + C + A ++ E+ +LP+
Sbjct: 354 VGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE-------GKVLAVM 113
+ ++I G+C +G +A + +K+ +P + T + +L G C V M
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGAL-LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+G+K +VVTYN+LM GY ++NK ++++ M +G++PDV Y ++I+ + +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 174 DEALTLLS 181
DEA ++S
Sbjct: 530 DEANEIIS 537
Score = 84.3 bits (207), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N + S I +C D ++L M I P++ F I C G LKEA S+L
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK---VLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
++ + I ++ + + ++DG CK GK + ++ ++PN+ Y+S + C G++
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDM 389
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
+A I + + G+ PD CYT +I+G C + D+A
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Score = 71.2 bits (173), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 87/174 (50%), Gaps = 9/174 (5%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+LL ++ + P++V ++ I CK + +A + ++ I + + +S+I GF
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNV 122
C VG +EAI L+ ++ PN + ++ L +C G +L + + G+ P+
Sbjct: 352 CKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
V Y +++DGYC +G +KA ++ +SG P + T++I + + +A
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+VV S ++ +CK + + A L++++L + P+V +N+LI+G+C VG +++A L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK 108
+ M+ + + PN T + L+ GL EGK
Sbjct: 641 IGLMVQRGMLPNESTHHALVLGL--EGK 666
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
++S +I +++ V+ A L ++ I P+ SL+ V L+ A ++ M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 85 IMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ + NA ++ + C +G ++L M G++P++V + +D C G +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+A +L + G++ D + +I+G CK+ +EA+ L+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI 364
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 90.1 bits (222), Expect = 8e-19, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + + R ++ + + +VV Y+ ++ + K ++ F+L EM + I P+V T+
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N LI+ + G + EA ++ E+I + P+ F ++ G K G M
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD 576
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+KP+VVT ++L+ GYC + KA + N + +G+ PDV Y +I+G C + +++
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 176 ALTLLSL 182
A L+ L
Sbjct: 637 ACELIGL 643
Score = 85.5 bits (210), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 6/171 (3%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
Q +L+ ++ + P+V Y+ +I S + +A ++ SE++ + +P+ F
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQ 116
+I GF G +EA L M + P+ T + LL G CK + + ++
Sbjct: 553 DVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDA 612
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
G+KP+VV YN+L+ GYC VG++ KA +++ M Q G+ P+ + ++ GL
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/188 (25%), Positives = 99/188 (52%), Gaps = 11/188 (5%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ +++L+ + PN+ +YS+ + + C + A ++ E+ +LP+
Sbjct: 354 VGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVC 410
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE-------GKVLAVM 113
+ ++I G+C +G +A + +K+ +P + T + +L G C V M
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGAL-LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNM 469
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+G+K +VVTYN+LM GY ++NK ++++ M +G++PDV Y ++I+ + +
Sbjct: 470 KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYI 529
Query: 174 DEALTLLS 181
DEA ++S
Sbjct: 530 DEANEIIS 537
Score = 84.3 bits (207), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 3/159 (1%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N + S I +C D ++L M I P++ F I C G LKEA S+L
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK---VLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
++ + I ++ + + ++DG CK GK + ++ ++PN+ Y+S + C G++
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDM 389
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
+A I + + G+ PD CYT +I+G C + D+A
Sbjct: 390 LRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Score = 71.2 bits (173), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 87/174 (50%), Gaps = 9/174 (5%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+LL ++ + P++V ++ I CK + +A + ++ I + + +S+I GF
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNV 122
C VG +EAI L+ ++ PN + ++ L +C G +L + + G+ P+
Sbjct: 352 CKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
V Y +++DGYC +G +KA ++ +SG P + T++I + + +A
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+VV S ++ +CK + + A L++++L + P+V +N+LI+G+C VG +++A L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK 108
+ M+ + + PN T + L+ GL EGK
Sbjct: 641 IGLMVQRGMLPNESTHHALVLGL--EGK 666
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
++S +I +++ V+ A L ++ I P+ SL+ V L+ A ++ M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 85 IMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ + NA ++ + C +G ++L M G++P++V + +D C G +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+A +L + G++ D + +I+G CK+ +EA+ L+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI 364
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 6/153 (3%)
Query: 29 IIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKN 88
+I C+ + A L E ++ PNV TF+ LI GFC G +EA LL+ M +
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 89 IDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAK 142
I+P+ TFNIL+ GL K+G+V L M +G +PN TY ++ G +AK
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 143 DILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
++++ M G+ P Y ++ GLC+ K V E
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVE 360
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 6/160 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G A+LQLL + + PNV+ +S +I FC +AF L M +RI P+ TF
Sbjct: 216 GNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITF 275
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N LI G G ++E I LL+ M +K +PN T+ +L GL + + +++ M+
Sbjct: 276 NILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMIS 335
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTP 155
G++P+ ++Y ++ G C V + +L M G P
Sbjct: 336 WGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N LI G C G L+ A+ LLDE + PN TF+ L+ G C +GK +L M K
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ ++P+ +T+N L+ G G V + D+L M G P+ Y ++ GL K E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 176 ALTLLS-LQKWTAKTLFL 192
A ++S + W + FL
Sbjct: 326 AKEMMSQMISWGMRPSFL 343
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 56 PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM- 114
P+ +FN ++ L E + ++ +A NIL+ GLC+ G + A +
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 115 -----KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+Q +PNV+T++ L+ G+C G+ +A +L M + + PD + ++I+GL K
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 170 IKMVDEALTLLSLQK 184
V+E + LL K
Sbjct: 285 KGRVEEGIDLLERMK 299
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 10/187 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + LLR++ + V P+ ++ + +C+ + A L EM+ P FT+
Sbjct: 248 GLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTY 306
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKN---IDPNAYTFNILLDGLCKEGK------VLAV 112
+ I FC G++ EA L D MI K P A TF +++ L K K ++
Sbjct: 307 CAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGR 366
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
M+ G P+V TY +++G C+ +V++A L+ M+ G PD+ Y + LC+ +
Sbjct: 367 MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 426
Query: 173 VDEALTL 179
DEAL L
Sbjct: 427 TDEALKL 433
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P ++ +I + K+ + F+L M++ LP+V T+ +I G C+ + EA
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
LDEM K P+ T+N L LC+ K+ M++ P+V TYN L+ +
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFE 458
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ + + A + M + DV+ Y +INGL EA LL
Sbjct: 459 MDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLE 505
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 91 PNAYTFNILLDGLCK-----EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDIL 145
P FN+LLD LCK EG+ L M+ VKP+ T+N L G+C V + KA +L
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLL 291
Query: 146 NSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
M ++G P+ Y I+ C+ MVDEA L
Sbjct: 292 EEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDF 328
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 89.4 bits (220), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCK-----DKLVSDAFDLYSEMLAKRILP 56
G+ R ++ + +K+E P ++ Y+ I+ F K +K+ S L +M + I P
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITS----LVEKMKSDGIAP 277
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVL 110
+ +T+N+LI L +EA + +EM + T+N LLD K KVL
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL 337
Query: 111 AVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
M+ G P++VTYNSL+ Y G +++A ++ N MA+ G PDV YT +++G +
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 171 KMVDEALTLL 180
V+ A+++
Sbjct: 398 GKVESAMSIF 407
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V Y+++I ++ +D ++ +A +L ++M K P+VFT+ +L+ GF G ++ A+S+
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQ-------GVKPNVVTYNSLMDGYC 133
+EM PN TFN + GK MMK G+ P++VT+N+L+ +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGK-FTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
G ++ + M ++G P+ + + +I+ + ++A+T+
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Score = 80.9 bits (198), Expect = 5e-16, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +++L ++ K P+V Y+T++ F + V A ++ EM PN+ TF
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N+ I + G E + + DE+ + + P+ T+N LL + G V M +
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G P T+N+L+ Y G +A + M +GVTPD+ Y ++ L + M ++
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 176 ALTLLS 181
+ +L+
Sbjct: 543 SEKVLA 548
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 62/99 (62%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
S ++LR+I K + P+++ Y+T+I ++C++ + DA ++SEM I+P+V T+N+ I
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK 105
+ + +EAI ++ MI PN T+N ++DG CK
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 75.5 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 6/174 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
L ++ ++ P V+ T++ K L+ +A +SE+ + P++ T NS++ +
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILL------DGLCKEGKVLAVMMKQGVKPNVV 123
++ +A +LD M + P+ T+N L+ K ++L ++ +G+KP+++
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDII 700
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
+YN+++ YC + A I + M SG+ PDV Y I M +EA+
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754
Score = 74.3 bits (181), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++ ++++ + + ++V+ A + M + P++ T+NSL+Y ++ +
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMKQGVKPNVVTYNSLMDGYCL 134
L E++ K I P+ ++N ++ C+ ++ + M G+ P+V+TYN+ + Y
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA 746
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+A ++ M + G P+ Y I++G CK+ DEA
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G S ++L ++E PN + Y +++ ++ K + L E+ + I P
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL 597
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD------GLCKEGKVLAVMMK 115
+L+ LL EA E+ + P+ T N ++ + K VL M +
Sbjct: 598 KTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE 657
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G P++ TYNSLM + + K+++IL + G+ PD+ Y +I C+ + +
Sbjct: 658 RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRD 717
Query: 176 ALTLLS 181
A + S
Sbjct: 718 ASRIFS 723
Score = 60.1 bits (144), Expect = 9e-10, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 43/217 (19%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
RA +++ + + ++ N V+ + II K+ VS A ++++ + +V+++ SL
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVV-AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL 214
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL----------------------DG 102
I F G +EA+++ +M P T+N++L DG
Sbjct: 215 ISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG 274
Query: 103 L-------------CKEG-------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAK 142
+ CK G +V M G + VTYN+L+D Y +A
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334
Query: 143 DILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+LN M +G +P + Y +I+ + M+DEA+ L
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL 371
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ R + ++ ++ ++P+V+ Y+T IGS+ D + +A + M+ PN T+N
Sbjct: 714 RMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYN 773
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNA 93
S++ G+C + EA +++ ++N+DP+A
Sbjct: 774 SIVDGYCKLNRKDEAKLFVED--LRNLDPHA 802
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L +L I+ ++P+VV Y+ ++ S+ + + A +++ M +R PNV T+
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 296
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N+LI + G L EA+ + +M I PN + LL + K VL+
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ N YNS + Y E+ KA + SM + V D +T++I+G C++ E
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 176 ALTLL 180
A++ L
Sbjct: 417 AISYL 421
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G R +L++ +K+ V P++V ++ ++ ++ + S A + M ++ P+ TF
Sbjct: 95 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 154
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNID--PNAYTFNILLDGLCKEGK------VLAVM 113
N +IY +G +A+ L + M K + P+ TF ++ +G+ V M
Sbjct: 155 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 214
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+ +G+KPN+V+YN+LM Y + G A +L + Q+G+ PDV YT ++N +
Sbjct: 215 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR---- 270
Query: 174 DEALTLLSLQKWTAKTLFLI 193
S Q AK +FL+
Sbjct: 271 -------SRQPGKAKEVFLM 283
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 1 MGQTRASLQLLRKIEGKLV--MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNV 58
+GQ+ +L L + K P+VV +++I+ + + + ++ M+A+ + PN+
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAV 112
++N+L+ + + G+ A+S+L ++ I P+ ++ LL+ K +V +
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 283
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
M K+ KPNVVTYN+L+D Y G + +A +I M Q G+ P+V
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 328
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
+Y+ +I + V A L+ EM P+ T+++LI G + A++L+D+M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 85 IMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ I P+ T+N L++ G +V M GV P++VT+N ++ Y +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+KA M + V PD + +II L K+ +AL L +
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N Y++ IGS+ + A LY M K++ + TF LI G C + EAIS L
Sbjct: 362 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 421
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLV 135
EM +I ++ +L K+G+V M G +P+V+ Y S++ Y
Sbjct: 422 KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 481
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+ KA ++ M +G+ PD + ++ K L+ L +
Sbjct: 482 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 530
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L +L I+ ++P+VV Y+ ++ S+ + + A +++ M +R PNV T+
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N+LI + G L EA+ + +M I PN + LL + K VL+
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G+ N YNS + Y E+ KA + SM + V D +T++I+G C++ E
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 176 ALTLL 180
A++ L
Sbjct: 549 AISYL 553
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G R +L++ +K+ V P++V ++ ++ ++ + S A + M ++ P+ TF
Sbjct: 227 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNID--PNAYTFNILLDGLCKEGK------VLAVM 113
N +IY +G +A+ L + M K + P+ TF ++ +G+ V M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+ +G+KPN+V+YN+LM Y + G A +L + Q+G+ PDV YT ++N +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR---- 402
Query: 174 DEALTLLSLQKWTAKTLFLI 193
S Q AK +FL+
Sbjct: 403 -------SRQPGKAKEVFLM 415
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 1 MGQTRASLQLLRKIEGKLV--MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNV 58
+GQ+ +L L + K P+VV +++I+ + + + ++ M+A+ + PN+
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAV 112
++N+L+ + + G+ A+S+L ++ I P+ ++ LL+ K +V +
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
M K+ KPNVVTYN+L+D Y G + +A +I M Q G+ P+V
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 460
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
+Y+ +I + V A L+ EM P+ T+++LI G + A++L+D+M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 85 IMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ I P+ T+N L++ G +V M GV P++VT+N ++ Y +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+KA M + V PD + +II L K+ +AL L +
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N Y++ IGS+ + A LY M K++ + TF LI G C + EAIS L
Sbjct: 494 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 553
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLV 135
EM +I ++ +L K+G+V M G +P+V+ Y S++ Y
Sbjct: 554 KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNAS 613
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+ KA ++ M +G+ PD + ++ K L+ L +
Sbjct: 614 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 662
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 89.0 bits (219), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P Y+ I + C + DA +L S M A P+V ++N+L++G+ +G EA
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEAS 394
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
L D++ +I P+ T+N L+DGLC+ G + M Q + P+V+TY +L+ G+
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
G ++ A ++ + M + G+ PD YT G ++ D+A L
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Score = 88.2 bits (217), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 90/165 (54%), Gaps = 6/165 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++ +Y+ I CK + A + ++ ++P+ T+ ++I G+ G K A +L
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCL 134
DEM+ K + P+ T+ +L+ G K G++ M K+GV+PNV+T+N+L+ G C
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
G +++A L M + G+ P+ YT++I+ C + +E + L
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKL 677
Score = 85.9 bits (211), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 98/183 (53%), Gaps = 7/183 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L ++ +L+ P+V+ Y+T++ F K+ +S A ++Y EML K I P+ + +
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNID-PNAYTFNILLDGLCKEGKVLAVMMKQ---- 116
+ G +G +A L +EM+ + P+ +N+ +DGLCK G ++ + Q
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 117 --GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G+ P+ VTY +++ GY G+ A+++ + M + + P V Y V+I G K ++
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 175 EAL 177
+A
Sbjct: 603 QAF 605
Score = 85.5 bits (210), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G +++ RKI ++P+ V Y+T+I + ++ A +LY EML KR+ P+V T
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
+ LIYG G L++A EM + + PN T N LL G+CK G + L M
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD 156
++G+ PN +Y L+ C + + + M + PD
Sbjct: 648 EEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
V Y+ +I F K+ + +A + +M ++FN LI G+C GL +A + DE
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 84 MIMKNIDPNAYTFNILLDGLCKEGKV--LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKA 141
M+ I P T+NI + LC G++ ++ P+VV+YN+LM GY +G+ +A
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEA 393
Query: 142 KDILNSMAQSGVTPDVQCYTVIINGLCK 169
+ + + + P + Y +I+GLC+
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCE 421
Score = 83.6 bits (205), Expect = 9e-17, Method: Composition-based stats.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
R++ + P+VV Y+T++ + K +A L+ ++ A I P++ T+N+LI G C
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 72 GLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTY 125
G L+ A L +EM + I P+ T+ L+ G K G +V M+++G+KP+ Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 126 NSLMDGYCLVGEVNKAKDILNSM-AQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
+ G +G+ +KA + M A PD+ Y V I+GLCK+ + +A+
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Score = 79.7 bits (195), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
Query: 11 LRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCI 70
K+ K +P+V + ++ ++++ A +Y M+ I+P V TFN+++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVT 124
G L+ + EM +NI+ + T+NIL++G K GK+ M + G +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+N L++GYC G + A + + M +G+ P Y + I LC +D+A LLS
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLS 367
Score = 51.2 bits (121), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + Q +++ + V PNV+ ++ ++ CK + +A+ +M + I PN +++
Sbjct: 599 GRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE 106
LI C +E + L EM+ K I+P+ YT L L K+
Sbjct: 659 TMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 94/178 (52%), Gaps = 7/178 (3%)
Query: 7 SLQLLRKIEGKL-VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
+++ +++ KL + P++V Y+T+I + C+ + D ++ E+ P++ +FN+L+
Sbjct: 176 AMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLL 235
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVK 119
F L E + D M KN+ PN ++N + GL + K ++ VM +G+
Sbjct: 236 EEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGIS 295
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
P+V TYN+L+ Y + + + N M + G+TPD Y ++I LCK +D A+
Sbjct: 296 PDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAV 353
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 72/136 (52%), Gaps = 10/136 (7%)
Query: 14 IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGL 73
++ K + PN+ Y++ + ++K +DA +L M + I P+V T+N+LI + +
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 74 LKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV--------LAVMMKQGVKPNVVTY 125
L+E + +EM K + P+ T+ +L+ LCK+G + A+ K +PN+ Y
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM--Y 371
Query: 126 NSLMDGYCLVGEVNKA 141
+++ G++++A
Sbjct: 372 KPVVERLMGAGKIDEA 387
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 17/148 (11%)
Query: 44 DLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL 103
D+ SE RI+ L+YG+ G+ + A L DEM N + +FN LL
Sbjct: 118 DIKSEDFVIRIM--------LLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAY 167
Query: 104 CKEGKVLAVMM-------KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD 156
K+ M K G+ P++VTYN+++ C G ++ I + ++G PD
Sbjct: 168 VNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPD 227
Query: 157 VQCYTVIINGLCKIKMVDEALTLLSLQK 184
+ + ++ + ++ E + L K
Sbjct: 228 LISFNTLLEEFYRRELFVEGDRIWDLMK 255
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
++V+ + ++ S K+ V A +++ EM K + + +N +I G C G + A +
Sbjct: 264 DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFM 323
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLV 135
+M+ + ++P+ +T+N L+ LCKEGK + M GV P+ ++Y ++ G C+
Sbjct: 324 CDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIH 383
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
G+VN+A + L SM +S + P+V + V+I+G + AL++L+L
Sbjct: 384 GDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNL 430
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P V++++ +I + + S A + + ML+ + PNV+T N+LI+G+ G L +A +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCL 134
+EM I P+ T+N+LL C G + M+++G +P+++TY L+ G C
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTA 187
G + KA+ +L+ + +G+T D + ++ +++ EA L +KW A
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA--YLVYKKWLA 573
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEA- 77
V P+V Y+T+I + CK+ +A DL+ M + P+ ++ +I G CI G + A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 78 ----------------------------------ISLLDEMIMKNIDPNAYTFNILLDGL 103
+S+L+ M+ + PN YT N L+ G
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 104 CKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
K G+++ M + P+ TYN L+ C +G + A + + M + G PD+
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 158 QCYTVIINGLCKIKMVDEALTLLSLQKWTAKTL 190
YT ++ GLC + +A +LLS + T T+
Sbjct: 511 ITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L++ +++ K V + V+Y+ II C + A+ +M+ + + P+VFT+
Sbjct: 279 GNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTY 338
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
N+LI C G EA L M + P+ ++ +++ GLC G V L M+K
Sbjct: 339 NTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLK 398
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+ P V+ +N ++DGY G+ + A +LN M GV P+V +I+G K
Sbjct: 399 SSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVK 452
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 45/223 (20%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ A+L L +K+ V+P ++ ++ ++ CK + A L EM PN ++
Sbjct: 135 GKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSY 194
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG-------------- 107
N+LI G C V + +A+ L + M I PN T NI++ LC++G
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 108 -------------------------------KVLAVMMKQGVKPNVVTYNSLMDGYCLVG 136
+V M ++ V + V YN ++ G C G
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314
Query: 137 EVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+ A + M + GV PDV Y +I+ LCK DEA L
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 45/189 (23%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
++S+I+ C + A L +M+ ++P + T N L+ G C G +++A L+ EM
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 85 IMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYC---LV 135
PN ++N L+ GLC V M K G++PN VT N ++ C ++
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 136 GEVNK------------------------------------AKDILNSMAQSGVTPDVQC 159
G NK A ++ M+Q V D
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 160 YTVIINGLC 168
Y VII GLC
Sbjct: 303 YNVIIRGLC 311
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 99 LLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
++ LC +GK+ A M+ GV P ++T+N L++G C G + KA ++ M + G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 153 VTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+P+ Y +I GLC + VD+AL L +
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFN 215
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 87.4 bits (215), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 9/187 (4%)
Query: 2 GQTRASLQLLRKIEGKL---VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNV 58
G R + L +I G + +P+V +++ ++ + + + + A L+ EM A + P V
Sbjct: 226 GHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTV 285
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV---LAVMMK 115
T+ +LI G+C + ++ A+ +L+EM M ++ N FN ++DGL + G++ L +M +
Sbjct: 286 VTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMER 345
Query: 116 QGV---KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
V P +VTYNSL+ +C G++ A IL M GV P Y K
Sbjct: 346 FFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNK 405
Query: 173 VDEALTL 179
+E + L
Sbjct: 406 TEEGMNL 412
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 91/183 (49%), Gaps = 6/183 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
M + + ++++L +++ + N ++++ II + +S+A + P + T
Sbjct: 298 MRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVT 357
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM------M 114
+NSL+ FC G L A +L M+ + +DP T+N K K M +
Sbjct: 358 YNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLI 417
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ G P+ +TY+ ++ C G+++ A + M G+ PD+ T++I+ LC+++M++
Sbjct: 418 EAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLE 477
Query: 175 EAL 177
EA
Sbjct: 478 EAF 480
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P +V Y++++ +FCK + A + M+ + + P T+N F +E ++L
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV-LAV-----MMKQGVKPNVVTYNSLMDGYCL 134
++I P+ T++++L LC++GK+ LA+ M +G+ P+++T L+ C
Sbjct: 413 YFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCR 472
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
+ + +A + ++ + G+ P + +I NGL M D A L SL
Sbjct: 473 LEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSL 520
Score = 57.4 bits (137), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 64 LIYGFCIVGLLKEAISLLDEMIMKNID----PNAYTFNILLDG------LCKEGKVLAVM 113
L+ C G ++EA S+ E I +D P+ FNILL+G L + K+ M
Sbjct: 218 LLDALCKEGHVREA-SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
VKP VVTY +L++GYC + V A ++L M + + + + II+GL + +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 174 DEALTLL 180
EAL ++
Sbjct: 337 SEALGMM 343
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRI----LPNVFTFNSLIYGFCIVGLLKEAISL 80
+ ++ + CK+ V +A +Y E + + +P+V FN L+ G+ LK+A L
Sbjct: 214 LLEVLLDALCKEGHVREA-SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKL 272
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-----MKQG-VKPNVVTYNSLMDGYCL 134
+EM N+ P T+ L++G C+ +V M MK ++ N + +N ++DG
Sbjct: 273 WEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGE 332
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
G +++A ++ P + Y ++ CK
Sbjct: 333 AGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 86.7 bits (213), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 7/181 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L+ ++ + + P+ ++T+I FC+ K + +A L+ EM +I P+V ++ ++I
Sbjct: 274 ALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIK 333
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKP 120
G+ V + + + + +EM I+PNA T++ LL GLC GK +L MM + + P
Sbjct: 334 GYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Query: 121 -NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+ + L+ G++ A ++L +MA V + Y V+I CK + A+ L
Sbjct: 394 KDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKL 453
Query: 180 L 180
L
Sbjct: 454 L 454
Score = 81.3 bits (199), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 96/185 (51%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + S+++ +K++ V + Y+++ + A +++M+++ + P T+
Sbjct: 199 GIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTY 258
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK-----EGKVLAVMMK- 115
N +++GF + L+ A+ ++M + I P+ TFN +++G C+ E + L V MK
Sbjct: 259 NLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKG 318
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ P+VV+Y +++ GY V V+ I M SG+ P+ Y+ ++ GLC + E
Sbjct: 319 NKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVE 378
Query: 176 ALTLL 180
A +L
Sbjct: 379 AKNIL 383
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
M+ +I S+ K +V ++ ++ +M + + ++NSL G A ++M
Sbjct: 187 MFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKM 246
Query: 85 IMKNIDPNAYTFNILLDG------LCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ + ++P +T+N++L G L + M +G+ P+ T+N++++G+C ++
Sbjct: 247 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM 306
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
++A+ + M + + P V YT +I G + VD+ L +
Sbjct: 307 DEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIF 348
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 21/183 (11%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL------ 55
G A+ ++L+ + V Y +I + CK + A L ++ K I+
Sbjct: 410 GDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDT 469
Query: 56 ----PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNI-DPNAYTFNILLDGLCKEG--- 107
P+ +N +I C G +A L +++ + + D +A N L+ G KEG
Sbjct: 470 LEMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDA--LNNLIRGHAKEGNPD 525
Query: 108 ---KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII 164
++L +M ++GV Y L+ Y GE AK L+SM + G PD + +I
Sbjct: 526 SSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVI 585
Query: 165 NGL 167
L
Sbjct: 586 ESL 588
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + L + G+ + ++V + I K++ V +L+ ++ A P+V +
Sbjct: 558 GRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAY 617
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
+ LI C EA L +EM+ K + P T+N ++DG CKEG++ + M +
Sbjct: 618 HVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYE 677
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
P+V+TY SL+ G C G ++A N M P+ + +I GLCK E
Sbjct: 678 DEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGE 737
Query: 176 AL 177
AL
Sbjct: 738 AL 739
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L+L R I P+V+ Y +I + CK +A L++EM++K + P V T+NS+I G
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDG 658
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMK------QGVKPN 121
+C G + +S + M +P+ T+ L+ GLC G+ + + + PN
Sbjct: 659 WCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPN 718
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCY 160
+T+ +L+ G C G +A M + + PD Y
Sbjct: 719 RITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
+L LL+K+ P + + ++ C++ DA ++ + L ++ + I
Sbjct: 527 GALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAI 586
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVK 119
G + + L ++ P+ +++L+ LCK + + M+ +G+K
Sbjct: 587 DGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLK 646
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
P V TYNS++DG+C GE+++ + M + PDV YT +I+GLC EA+
Sbjct: 647 PTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI 704
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 18/187 (9%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++ LL I ++P +MY+ II CK+ ++ L EM + P+ FT N
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLN---- 513
Query: 67 GFCIVGLLKE------AISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
CI G L E A+ LL +M +P L+ LC+ G K L +
Sbjct: 514 --CIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVA 571
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+G ++V + +DG V++ ++ + +G PDV Y V+I LCK
Sbjct: 572 GEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTM 631
Query: 175 EALTLLS 181
EA L +
Sbjct: 632 EADILFN 638
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 6/176 (3%)
Query: 11 LRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCI 70
L K K ++P+ S +I K V A L +++ ++P +N++I G C
Sbjct: 427 LLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCK 486
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVT 124
G +E++ LL EM ++P+ +T N + L + +L M G +P +
Sbjct: 487 EGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKH 546
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
L+ C G A L+ +A G + T I+GL K + VD L L
Sbjct: 547 TTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELF 602
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 24/201 (11%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+ QL K+ + ++ +Y +IG CK K + A LY E+ I P+ L+
Sbjct: 302 AFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLC 361
Query: 67 GFC-----------IVGLL-KEAI-----SLLDEMIMKNIDPNAYTF------NILLDGL 103
F I+G + K+++ SL + I ++ AY+F N DG+
Sbjct: 362 SFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGV 421
Query: 104 CKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVI 163
+ K+L K + P+ + + +++ +V+ A +L+ + Q+G+ P Y I
Sbjct: 422 SEIVKLLKDHNK-AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNI 480
Query: 164 INGLCKIKMVDEALTLLSLQK 184
I G+CK +E+L LL K
Sbjct: 481 IEGMCKEGRSEESLKLLGEMK 501
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 45 LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
+Y +ML P+V T+N L++ +G + L DEM P++YT+NILL L
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 105 KEGKVLAVM-----MKQ-GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ 158
K K LA + MK+ G+ P+V+ Y +L+DG G + K L+ M ++G PDV
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVV 360
Query: 159 CYTVIINGLCKIKMVDEA 176
CYTV+I G +D+A
Sbjct: 361 CYTVMITGYVVSGELDKA 378
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 13/150 (8%)
Query: 41 DAFD-LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE---AISLLDEMIMKNIDPNAYTF 96
D FD L+ EM P+ +T+N L++ I+G + A++ L+ M IDP+ +
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLH---ILGKGNKPLAALTTLNHMKEVGIDPSVLHY 327
Query: 97 NILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQ 150
L+DGL + G + A M+K G +P+VV Y ++ GY + GE++KAK++ M
Sbjct: 328 TTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTV 387
Query: 151 SGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G P+V Y +I GLC EA LL
Sbjct: 388 KGQLPNVFTYNSMIRGLCMAGEFREACWLL 417
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+VV Y+ +I + + A +++ EM K LPNVFT+NS+I G C+ G +EA L
Sbjct: 357 PDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWL 416
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQG 117
L EM + +PN ++ L+ L K G KV+ M+K+G
Sbjct: 417 LKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
A+L L ++ + P+V+ Y+T+I + + EM+ P+V + +I
Sbjct: 307 AALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMI 366
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVK 119
G+ + G L +A + EM +K PN +T+N ++ GLC G+ +L M +G
Sbjct: 367 TGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCN 426
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
PN V Y++L+ G++++A+ ++ M + G
Sbjct: 427 PNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 54 ILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG------LCKEG 107
I P+V + +LI G G L+ LDEM+ P+ + +++ G L K
Sbjct: 320 IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAK 379
Query: 108 KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
++ M +G PNV TYNS++ G C+ GE +A +L M G P+ Y+ +++ L
Sbjct: 380 EMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYL 439
Query: 168 CKIKMVDEA 176
K + EA
Sbjct: 440 RKAGKLSEA 448
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 43 FDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG 102
+ L EM+ TFN LI GL K+A+ + N P +++N +L+
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNS 228
Query: 103 L--CKEGKVLAVMMKQ----GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD 156
L K+ K++ + KQ G P+V+TYN L+ +G++++ + + MA+ G +PD
Sbjct: 229 LLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPD 288
Query: 157 VQCYTVIINGLCKIKMVDEALTLLSLQK 184
Y ++++ L K ALT L+ K
Sbjct: 289 SYTYNILLHILGKGNKPLAALTTLNHMK 316
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++L + G+ + +S +I S C+ + V DA L +M++K P FN +++
Sbjct: 358 EMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHAC 417
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNV 122
G L EA +L M + + P+ YT+ +++ G K G ++LA K+ K +
Sbjct: 418 SKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP 477
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
VTY++L+ GYC + E ++A +LN M + GV P+ Y +I C +K +D
Sbjct: 478 VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC-LKALD 528
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCK-DKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
S+ L K + K + P V +T+I + CK D ++ A ++ ++ + + F+ +I
Sbjct: 322 SVYELAKTKEKSLPPRFV--ATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVI 379
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVK 119
+ C + +K+A +LL +MI K P FN+++ K G +VL +M +G+K
Sbjct: 380 HSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLK 439
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
P+V TY ++ GY G +++A++IL + Y +I G CKI+ DEAL L
Sbjct: 440 PDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKL 499
Query: 180 LS 181
L+
Sbjct: 500 LN 501
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+++A+ + K E PN Y + + CK + A + +ML +L
Sbjct: 244 LGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQ 303
Query: 61 FNSLIYGFCIVGLLKEAISLLD-------------------------------------- 82
++I FC G +EA S+ +
Sbjct: 304 MGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDL 363
Query: 83 --EMIMKNIDPNAYTFNILLDGLC-----KEGKVLAV-MMKQGVKPNVVTYNSLMDGYCL 134
E + I P F+ ++ LC K+ K L + M+ +G P +N ++
Sbjct: 364 SGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSK 419
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTAKTL 190
G++++AK++L M G+ PDV YTVII+G K M+DEA +L+ K K L
Sbjct: 420 TGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKL 475
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + ++L+ +E + + P+V Y+ II + K ++ +A ++ +E K + T+
Sbjct: 421 GDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTY 480
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAVMMK 115
++LI G+C + EA+ LL+EM + PNA +N L+ C ++ +VL MK
Sbjct: 481 HALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMK 540
Query: 116 Q-GVKPNVVT 124
Q G+ N ++
Sbjct: 541 QKGLHLNAIS 550
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P +++ ++ + K + +A ++ M ++ + P+V+T+ +I G+ G++ EA +
Sbjct: 405 PGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 464
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCK-----EG-KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
L E K+ + T++ L+ G CK E K+L M + GV+PN YN L+ +CL
Sbjct: 465 LAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL 524
Query: 135 VG-EVNKAKDILNSMAQSGV 153
+ KA+ + M Q G+
Sbjct: 525 KALDWEKAEVLFEEMKQKGL 544
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +++L ++++ + + +VV Y+T+I + + V ++ EM + PNV T
Sbjct: 238 GKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATH 297
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV---MMKQGV 118
N++I C G +++A +LDEM + P++ T+ L L K ++L++ M++ GV
Sbjct: 298 NTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGV 357
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+P + TY LM + G + + +M +SG TPD Y +I+ L + M+D A
Sbjct: 358 RPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMA 415
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P++ Y+ +I FC+ S ++ + +EM K I PN +F +I GF E
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
+L M + ++ T+NI + LCK K +L M+ G+KPN VTY+ L+ G+
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
C + +AK + M G PD +CY +I LCK + AL+L
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSL 349
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 54 ILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE------G 107
I P++ T+N +I FC G + S++ EM K I PN+ +F +++ G E G
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 108 KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
KVLA+M +GV V TYN + C + +AK +L+ M +G+ P+ Y+ +I+G
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 168 CKIKMVDEALTLLSL 182
C +EA L +
Sbjct: 303 CNEDDFEEAKKLFKI 317
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 13 KIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVG 72
++E K + PN + +I F + + + + M + + V T+N I C
Sbjct: 212 EMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRK 271
Query: 73 LLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYN 126
KEA +LLD M+ + PN T++ L+ G C E K+ +M+ +G KP+ Y
Sbjct: 272 KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYF 331
Query: 127 SLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+L+ C G+ A + + P ++NGL K V+EA L+
Sbjct: 332 TLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 7/151 (4%)
Query: 23 VVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLD 82
V Y+ I S CK K +A L ML+ + PN T++ LI+GFC +EA L
Sbjct: 257 VSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFK 316
Query: 83 EMIMKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVVTYNSLMDGYCLVG 136
M+ + P++ + L+ LCK G + M++ P+ SL++G
Sbjct: 317 IMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDS 376
Query: 137 EVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+V +AK+++ + + T +V+ + + L
Sbjct: 377 KVEEAKELIGQVKEK-FTRNVELWNEVEAAL 406
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN V YS +I FC + +A L+ M+ + P+ + +LIY C G + A+SL
Sbjct: 290 PNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSL 349
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV-----LAVMMKQGVKPNVVTYNSL 128
E + KN P+ L++GL K+ KV L +K+ NV +N +
Sbjct: 350 CKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEV 402
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L+ +++ + P+V ++ +I +C+ A DL+ EM K PNV +F
Sbjct: 207 GDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSF 266
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMK 115
N+LI GF G ++E + + EMI + T IL+DGLC+EG+V + ++
Sbjct: 267 NTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLN 326
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ V P+ Y SL++ C + +A +++ + + G TP T ++ GL K ++
Sbjct: 327 KRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEK 386
Query: 176 A 176
A
Sbjct: 387 A 387
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
R I+GK PNV +Y+T++ + K + A Y M +R P+V TFN LI G+C
Sbjct: 185 RLIDGK---PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRS 241
Query: 72 GLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA------VMMKQGVKPNVVTY 125
A+ L EM K +PN +FN L+ G GK+ M++ G + + T
Sbjct: 242 SKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATC 301
Query: 126 NSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
L+DG C G V+ A ++ + V P Y ++ LC
Sbjct: 302 EILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLC 344
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL---PNVFTFNSLIYGFCIVGLLKEAISLL 81
++ + I ++C+ + + A + M KR++ PNV +N+++ G+ G + +A+
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTM--KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLV 135
M + P+ TFNIL++G C+ K + M ++G +PNVV++N+L+ G+
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G++ + + M + G ++++GLC+ VD+A L+
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLV 321
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 41/216 (18%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSF--------------------------------- 33
+L L R+++ K PNVV ++T+I F
Sbjct: 247 ALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVD 306
Query: 34 --CKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDP 91
C++ V DA L ++L KR+LP+ F + SL+ C A+ +++E+ K P
Sbjct: 307 GLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 92 NAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDIL 145
L++GL K G+ + MM G+ P+ VT+N L+ C A +
Sbjct: 367 CFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLR 426
Query: 146 NSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ G PD Y V+++G K E L++
Sbjct: 427 LLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVN 462
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K V+P+ Y +++ C + A ++ E+ K P +L+ G G ++
Sbjct: 327 KRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEK 386
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMKQGVKPNVVTYNSLMD 130
A +++M+ I P++ TFN+LL LC ++ + +G +P+ TY+ L+
Sbjct: 387 ASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVS 446
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
G+ G + + ++N M + PD+ Y +++GL
Sbjct: 447 GFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 2 GQTRA--SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVF 59
G+ +A +++++ ++ K P + +T++ K A +M+ ILP+
Sbjct: 345 GENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSV 404
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVM 113
TFN L+ C +A L K +P+ T+++L+ G KEG+ ++ M
Sbjct: 405 TFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEM 464
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAK 142
+ + + P++ TYN LMDG G+ ++ +
Sbjct: 465 LDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 96 FNILLDGLCKEGKVLAVM-----MKQGV--KPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
F +D C+ K+ + MK+ + KPNV YN++++GY G+++KA M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 149 AQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+ PDV + ++ING C+ D AL L K
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 85.1 bits (209), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 94/167 (56%), Gaps = 7/167 (4%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSD-AFDLYSEMLAKRILPNVFTFNSLIYGF 68
LLR++E + PNV Y+ +I ++ + K +SD A D + M + P+ ++ +LI+ +
Sbjct: 436 LLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAY 495
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNV 122
+ G ++A + +EM + I P+ T+ +LD + G ++ +M+++ +K
Sbjct: 496 SVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTR 555
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+TYN+L+DG+ G +A+D+++ ++ G+ P V Y +++N +
Sbjct: 556 ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Score = 70.5 bits (171), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
Query: 19 VMPNVVMYSTIIGSFCK-DKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEA 77
V P+ V + +I + K + + ++++ +M K + + F L+ FC GL +EA
Sbjct: 304 VYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEA 363
Query: 78 ISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDG 131
+ + EM K I N +N L+D K + V M +G+KP+ TYN LMD
Sbjct: 364 LVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDA 423
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
Y + + + +L M G+ P+V+ YT +I+ + K + +
Sbjct: 424 YARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSD 467
Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++ K+ K V + ++ ++ SFC + L +A + +EM K I N +N+L+ +
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
++E L EM K + P+A T+NIL+D + + +L M G++PNV
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 123 VTYNSLMDGYCLVGEV-NKAKDILNSMAQSGVTPDVQCYTVIING 166
+Y L+ Y ++ + A D M + G+ P YT +I+
Sbjct: 450 KSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHA 494
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +L + ++E K + N ++Y+T++ ++ K + + L++EM K + P+ T+
Sbjct: 358 GLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATY 417
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV-------MM 114
N L+ + +LL EM ++PN ++ L+ + K+ + M
Sbjct: 418 NILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMK 477
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
K G+KP+ +Y +L+ Y + G KA M + G+ P V+ YT +++
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF 530
Score = 63.9 bits (154), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P+V Y++++ +F + +++ ML ++I T+N+L+ GF GL EA
Sbjct: 516 IKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEAR 575
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
++ E + P+ T+N+L++ + G ++L M +KP+ +TY++++ +
Sbjct: 576 DVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCY 160
V + +A M +SG PD + Y
Sbjct: 636 VRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 60.8 bits (146), Expect = 6e-10, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 10/190 (5%)
Query: 1 MGQTRAS---LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPN 57
+G+ R + L LL + K +V +Y+ I + DA+++Y M + P+
Sbjct: 248 LGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPD 307
Query: 58 VFTFNSLIYGFCIVGL-LKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG---KVLAV- 112
T LI G KE + ++M K + + F L+ C EG + L +
Sbjct: 308 NVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQ 367
Query: 113 --MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
M K+G++ N + YN+LMD Y + + + + M G+ P Y ++++ +
Sbjct: 368 TEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARR 427
Query: 171 KMVDEALTLL 180
D TLL
Sbjct: 428 MQPDIVETLL 437
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 84.3 bits (207), Expect = 5e-17, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +LQLL + + +II + +A L+ E+ I P +
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N+L+ G+ G LK+A S++ EM + + P+ +T+++L+D G+ VL M
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
V+PN ++ L+ G+ GE K +L M GV PD Q Y V+I+ K +D
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 176 ALT 178
A+T
Sbjct: 463 AMT 465
Score = 80.5 bits (197), Expect = 7e-16, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + Q+L++++ V P+ Y+ +I +F K + A + ML++ I P+ T+
Sbjct: 423 GEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTW 482
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMK 115
N+LI C G A + + M + P A T+NI+++ + ++L M
Sbjct: 483 NTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKS 542
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
QG+ PNVVT+ +L+D Y G N A + L M G+ P Y +IN + + ++
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQ 602
Query: 176 AL 177
A+
Sbjct: 603 AV 604
Score = 77.4 bits (189), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 6/169 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+LL K++ + ++PNVV ++T++ + K +DA + EM + + P+ +N+LI +
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
GL ++A++ M + P+ N L++ ++ + VL M + GVKP+V
Sbjct: 595 AQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDV 654
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIK 171
VTY +LM V + K + M SG PD + +++ + L +K
Sbjct: 655 VTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMK 703
Score = 70.9 bits (172), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + + ++ ++E + V P+ YS +I ++ A + EM A + PN F F
Sbjct: 353 GPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVF 412
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK------EGKVLAVMMK 115
+ L+ GF G ++ +L EM + P+ +N+++D K M+
Sbjct: 413 SRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLS 472
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+G++P+ VT+N+L+D +C G A+++ +M + G P Y ++IN + D+
Sbjct: 473 EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 532
Query: 176 ALTLLSLQK 184
LL K
Sbjct: 533 MKRLLGKMK 541
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 8/168 (4%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDA--FDLYSEMLAKRILPNVFTFNSL 64
+L L+ K+ + V YS +I S + + LY E+ ++ +V N +
Sbjct: 216 ALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDI 275
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGV 118
I GF G +A+ LL + T ++ L G+ L + + G+
Sbjct: 276 IMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGI 335
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
KP YN+L+ GY G + A+ +++ M + GV+PD Y+++I+
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 6/128 (4%)
Query: 45 LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
+Y +ML P+V T+N +++ +G LLDEM+ P+ YT+NILL L
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 105 KEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ 158
K LA M + GV+P V+ + +L+DG G++ K ++ + G TPDV
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 159 CYTVIING 166
CYTV+I G
Sbjct: 364 CYTVMITG 371
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V+ Y+ ++ + + + L EM+ P+++T+N L++ A++L
Sbjct: 255 PDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNL 314
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCL 134
L+ M ++P F L+DGL + GK+ A +K G P+VV Y ++ GY
Sbjct: 315 LNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYIS 374
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
GE+ KA+++ M + G P+V Y +I G C EA LL
Sbjct: 375 GGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALL 420
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+VV Y+ +I + + A +++ EM K LPNVFT+NS+I GFC+ G KEA +L
Sbjct: 360 PDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACAL 419
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVL 110
L EM + +PN ++ L++ L GKVL
Sbjct: 420 LKEMESRGCNPNFVVYSTLVNNLKNAGKVL 449
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 6/182 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+T +LL ++ P++ Y+ ++ A +L + M + P V
Sbjct: 270 LGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIH 329
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG------LCKEGKVLAVMM 114
F +LI G G L+ +DE + P+ + +++ G L K ++ M
Sbjct: 330 FTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMT 389
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
++G PNV TYNS++ G+C+ G+ +A +L M G P+ Y+ ++N L V
Sbjct: 390 EKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVL 449
Query: 175 EA 176
EA
Sbjct: 450 EA 451
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
A+L LL + V P V+ ++T+I + + E + P+V + +I
Sbjct: 310 AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMI 369
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVK 119
G+ G L++A + EM K PN +T+N ++ G C GK +L M +G
Sbjct: 370 TGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN 429
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
PN V Y++L++ G+V +A +++ M + G
Sbjct: 430 PNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 45 LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL- 103
L EM+ TFN LI GL ++ + + N P +++N +L L
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLL 233
Query: 104 -CKEGK----VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ 158
K+ K V M++ G P+V+TYN +M +G+ ++ +L+ M + G +PD+
Sbjct: 234 GVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLY 293
Query: 159 CYTVIINGLCKIKMVDEALTLLS 181
Y ++++ L AL LL+
Sbjct: 294 TYNILLHHLATGNKPLAALNLLN 316
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 23 VVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLD 82
V +Y++++ + C K+ A+ L M+ K + P+ T+ L+ G+C G +KEA LD
Sbjct: 182 VDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLD 241
Query: 83 EMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVG 136
EM + +P A ++L++GL G ++++ M K G P++ T+N L++ G
Sbjct: 242 EMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSG 301
Query: 137 EVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
EV ++ + + G+ D+ Y +I + KI +DEA LL+
Sbjct: 302 EVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLN 346
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 84.0 bits (206), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 11/184 (5%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI- 65
+++LL + + P+ + Y+T++ + +D + A ++ +M A R P+++T+N++I
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 66 -YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMKQGV 118
YG C GL EA L E+ +K P+A T+N LL +E +V M K G
Sbjct: 341 VYGRC--GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGF 398
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSM-AQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
+ +TYN+++ Y G+++ A + M SG PD YTV+I+ L K EA
Sbjct: 399 GKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAA 458
Query: 178 TLLS 181
L+S
Sbjct: 459 ALMS 462
Score = 79.0 bits (193), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 93/168 (55%), Gaps = 7/168 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+L ++E K P+ V Y++++ +F +++ ++Y +M + T+N++I+ +
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 69 CIVGLLKEAISLLDEMI-MKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
G L A+ L +M + +P+A T+ +L+D L K + +++ M+ G+KP
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+ TY++L+ GY G+ +A+D + M +SG PD Y+V+++ L +
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 6/163 (3%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
MY+ II ++ K KL A + + P++ T+NSL+ + G + A ++ + M
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 85 IMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ P + NILL LC +G+ V+ + G K + + ++D + G +
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ K I +SM +G P ++ Y ++I LCK K V +A ++S
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVS 916
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEM--LAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+ Y+TII + K + A LY +M L+ R P+ T+ LI EA +L+
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN-PDAITYTVLIDSLGKANRTVEAAALM 461
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLV 135
EM+ I P T++ L+ G K GK + M++ G KP+ + Y+ ++D
Sbjct: 462 SEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRG 521
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
E KA + M G TP Y ++I GL K D+
Sbjct: 522 NETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDD 561
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 93/187 (49%), Gaps = 7/187 (3%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
+ ++Q+ ++I+ + P+ Y+T+I +C+D+ + + L +M + P + T+ SL
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD------GLCKEGKVLAVMMKQGV 118
I F L++A L +E++ K + + ++ ++ K K+L +M G+
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
+P + T + LM Y G +A+ +L+++ + V Y+ +I+ + K + +
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123
Query: 179 -LLSLQK 184
LL ++K
Sbjct: 1124 RLLEMKK 1130
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P + +Y +I CK K V DA + SEM + +NS++ + + K+ +
Sbjct: 889 LPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQ 948
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCK-----EGKVLAVMMKQ-GVKPNVVTYNSLMDGYC 133
+ + ++P+ T+N L+ C+ EG +L M+ G+ P + TY SL+ +
Sbjct: 949 VYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFG 1008
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVII 164
+ +A+ + + G+ D Y ++
Sbjct: 1009 KQKCLEQAEQLFEELLSKGLKLDRSFYHTMM 1039
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN M + I+G + S A ++++ + V +N+++ + G +A L
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRA-EPTVGDRVQVYNAMMGVYSRSGKFSKAQEL 247
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG--------KVLAVMMKQGVKPNVVTYNSLMDGY 132
+D M + P+ +FN L++ K G ++L ++ G++P+ +TYN+L+
Sbjct: 248 VDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSAC 307
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
++ A + M PD+ Y +I+ + + EA L
Sbjct: 308 SRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 84.0 bits (206), Expect = 6e-17, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 102/187 (54%), Gaps = 8/187 (4%)
Query: 2 GQTRASLQLLRKIEGKL-VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G + SL+L + ++ ++ PN +Y+ +I ++ L+ +++ EM ++ + +VF+
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG-------KVLAVM 113
+ +LI + G + ++ LLD M + I P+ T+N +++ + G + A M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+G++P++VTYN+L+ + G ++A+ + +M G+ PD+ Y+ ++ K++ +
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 174 DEALTLL 180
++ LL
Sbjct: 299 EKVCDLL 305
Score = 71.2 bits (173), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+ R + ++P++ YS ++ +F K + + DL EM + LP++ ++N L+ +
Sbjct: 269 VFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYA 328
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVV 123
G +KEA+ + +M PNA T+++LL+ + G+ + M P+
Sbjct: 329 KSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAA 388
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
TYN L++ + G + + + M + + PD++ Y II K + ++A +L
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKIL 445
Score = 67.8 bits (164), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 84/186 (45%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + ++ + +++ PN YS ++ F + D L+ EM + P+ T+
Sbjct: 331 GSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATY 390
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N LI F G KE ++L +M+ +NI+P+ T+ ++ K G K+L M
Sbjct: 391 NILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA 450
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+ P+ Y +++ + +A N+M + G P ++ + ++ + +V E
Sbjct: 451 NDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKE 510
Query: 176 ALTLLS 181
+ +LS
Sbjct: 511 SEAILS 516
Score = 63.5 bits (153), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 6/179 (3%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L L ++ + + P++V Y+T++ + L +A ++ M I+P++ T++ L+
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
F + L++ LL EM P+ ++N+LL+ K G V M G PN
Sbjct: 292 FGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPN 351
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
TY+ L++ + G + + + M S PD Y ++I + E +TL
Sbjct: 352 ANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 6/178 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++L+ + ++P+ Y+ +I +F + L +A ++ M P++ TF+SL+Y F
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSF 502
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNV 122
GL+KE+ ++L ++ I N TFN ++ + G K M K P+
Sbjct: 503 ARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
T +++ Y V++ ++ M S + P + CY +++ K + D+ LL
Sbjct: 563 RTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELL 620
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 83.2 bits (204), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK-RILPNVFT 60
G+ + L++++ K P+ Y+ ++ CK K + ++ EM + P++ +
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
F LI C L+EA+ L+ ++ P+ + +N ++ G C K V M
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
++GV+P+ +TYN+L+ G G V +A+ L +M +G PD YT ++NG+C+
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ V + S C+ V +A DL E+ K P+ +T+N L+ C L
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 81 LDEMIMK-NIDPNAYTFNILLDGLCKEGKVLAVMM------KQGVKPNVVTYNSLMDGYC 133
+DEM ++ P+ +F IL+D +C + M G KP+ YN++M G+C
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFC 276
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ + ++A + M + GV PD Y +I GL K V+EA
Sbjct: 277 TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P++V ++ +I + C K + +A L S++ P+ F +N+++ GFC + EA+
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGY 132
+ +M + ++P+ T+N L+ GL K G+V L M+ G +P+ TY SLM+G
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 133 CLVG 136
C G
Sbjct: 346 CRKG 349
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 21 PNVVMYSTIIGSFCK--DKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
P + ++ C+ D +S+ + + M+ + P+ T + + C G + EA
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-----MKQG--VKPNVVTYNSLMDG 131
L+ E+ K+ P+ YT+N LL LCK + V M+ VKP++V++ L+D
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
C + +A +++ + +G PD Y I+ G C + EA+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 58/103 (56%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
R ++ L+ K+ P+ +Y+TI+ FC S+A +Y +M + + P+ T+N+L
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG 107
I+G G ++EA L M+ +P+ T+ L++G+C++G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 35 KDKLVSDAFDLYSEMLAKRILPNVFTF-NSLIYGFCIVGLLKEAISLLDEMI--MKNIDP 91
K +SDA L++ + A +P F NS++ + + ++ + + L ++ N P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 92 NAYTFNILLDGLCKE--------GKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKD 143
TF ILL C+ +VL +M+ G++P+ VT + + C G V++AKD
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 144 ILNSMAQSGVTPDVQCYTVIINGLCKIK 171
++ + + PD Y ++ LCK K
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCK 208
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
VMY+ ++ +CKD ++ A LY M+ + + FN+LI+GF +G+L + + +
Sbjct: 273 VMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQ 332
Query: 84 MIMKNIDPNAYTFNILLDGLCKEGKVLAVMM-------KQGVKPNVVTYNSLMDGYCLVG 136
MI K + N +T++I++ CKEG V + + + NV Y +L+ G+ G
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Query: 137 EVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
++KA D+L M +G+ PD Y V++ L K + A+ +L
Sbjct: 393 GMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVIL 436
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
A+ ++ +E + P V +YS+IIGS K V +A + +++ML I P+ + +I
Sbjct: 565 AAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMI 624
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVK 119
+ G + EA L++E++ + P+++T+ +L+ G K G + L M++ G+
Sbjct: 625 NTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLS 684
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
PNVV Y +L+ + G+ + + M ++ + D Y +++GL +
Sbjct: 685 PNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWR 734
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +++++ K++ K ++PN+ +++TII +C + +A++ M + I+PN+ T+
Sbjct: 774 GSKSFAMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTY 832
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
L+ G ++ AI L + N +P+ ++ LL GLC + L M K
Sbjct: 833 TILMKSHIEAGDIESAIDLFEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQK 889
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G+ PN +Y L+ C +A ++ MA + P +T +I LC+ K + E
Sbjct: 890 SGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLRE 949
Query: 176 ALTLLSLQKWTAKTL 190
A L ++ + ++L
Sbjct: 950 ARALFAIMVQSGRSL 964
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 94/228 (41%), Gaps = 47/228 (20%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
MG Q L K+ + PNVV+Y+ +IG F K +F L+ M I +
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIA 724
Query: 61 FNSLIYGF-----------CIVGLLKEAI-----------------------SLLDEMI- 85
+ +L+ G IV KE + S E+I
Sbjct: 725 YITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIG 784
Query: 86 --MKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
K+I PN Y N ++ G C G++ L M K+G+ PN+VTY LM + G+
Sbjct: 785 KVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGD 844
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL-LSLQK 184
+ A D+ + PD Y+ ++ GLC K +AL L L +QK
Sbjct: 845 IESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQK 889
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P+V Y ++ CK AF + M + P V ++S+I G + EA
Sbjct: 544 VPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEE 603
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYC 133
+M+ I P+ + I+++ + G++ + ++K ++P+ TY L+ G+
Sbjct: 604 TFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFV 663
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
+G + K L+ M + G++P+V YT +I K + TL L
Sbjct: 664 KMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGL 712
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 88/181 (48%), Gaps = 6/181 (3%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
A+L + K+ P Y+++I ++ ++ D L + + +P+V T+ ++
Sbjct: 495 AALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVV 554
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVK 119
C A +++D M + P ++ ++ L K+G+V A M++ G++
Sbjct: 555 NELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQ 614
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
P+ + Y +++ Y G +++A +++ + + + P YTV+I+G K+ M+++
Sbjct: 615 PDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQY 674
Query: 180 L 180
L
Sbjct: 675 L 675
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 42/162 (25%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKN--IDPNAYT----------------------- 95
+ SL Y FC G EA +L D M + +D YT
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 96 ----------FNILLDGLCK-----EGKVL-AVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
FN L+ G K +G+V+ + M+K+GV+ NV TY+ ++ YC G V+
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 140 KA-KDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
A + +N+ ++ +V CYT +I G K +D+A+ LL
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLL 401
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
LL +I K V + + + C + A +M+ P F++NS+I
Sbjct: 463 SLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCL 522
Query: 69 CIVGLLKEAISLLDEMIMKNID--PNAYTFNILLDGLCKEGK------VLAVMMKQGVKP 120
++++ SL++ I++ +D P+ T+ I+++ LCK+ ++ M + G++P
Sbjct: 523 FQENIIEDLASLVN--IIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRP 580
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
V Y+S++ G V +A++ M +SG+ PD Y ++IN + +DEA L+
Sbjct: 581 TVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELV 640
Query: 181 S 181
Sbjct: 641 E 641
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLY-SEMLAKRILPNVFTFNSLIYGFCIVGLLK 75
K V NV Y +IGS+CK+ V A L+ + ++ I NV + +LI+GF G +
Sbjct: 336 KGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMD 395
Query: 76 EAISLLDEMIMKNIDPNAYTFNILLDGL--CKEGKVLAVMMKQ------GVKPNVV 123
+A+ LL M+ I P+ T+ +LL L C E K V+++ G+ P V+
Sbjct: 396 KAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVI 451
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 82/145 (56%), Gaps = 7/145 (4%)
Query: 45 LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM-IMKNIDPNAYTFNILLDGL 103
L+ +M+ I P+VF N L+ G+ + + +A+ + +M ++ + +PN++T++ L+ GL
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 104 CKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
C +G+ +L+ M +G PN +YNSL++ + L GE++ A L M ++G D
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 158 QCYTVIINGLCKIKMVDEALTLLSL 182
Y +++ C+ DEA LL +
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEM 419
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEM-LAKRILPNVFTFNSLIYGF 68
L R++ + P+V + ++ + V+DA ++ +M + PN FT++ LI+G
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNV 122
C G A LL EM K PN ++N L++ G++ L M++ G +
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
++Y +L+D C G+ ++A +L + + + D Y ++N L K
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVNVLHK 440
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 20/172 (11%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V Y+ +I + + A LY+EM+ + ++P+ T+NS+I+G C L +A
Sbjct: 47 PDVQTYNMMI----RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA--- 99
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCL 134
+ + + TFN L++G CK +V M ++G+ NV+TY +L+ G+
Sbjct: 100 ------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQ 153
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWT 186
VG+ N A DI M +GV + I+ LC K + +A+ +L LQK +
Sbjct: 154 VGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML-LQKSS 204
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+ II CK +A ++++ +L + P+V T+N +I F +G A L EMI
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG---RAEKLYAEMI 72
Query: 86 MKNIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDIL 145
+ + P+ T+N ++ GLCK+ K+ + V + T+N+L++GYC V ++
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQA---RKVSKSCSTFNTLINGYCKATRVKDGMNLF 129
Query: 146 NSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
M + G+ +V YT +I+G ++ + AL +
Sbjct: 130 CEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIF 164
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 15 EGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLL 74
+ + V + ++T+I +CK V D +L+ EM + I+ NV T+ +LI+GF VG
Sbjct: 98 QARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDF 157
Query: 75 KEAISLLDEMIMKNIDPNAYTFNILLDGLC--KEGKVLAVMMKQGVKPNVVTYN 126
A+ + EM+ + ++ TF +L LC KE + M+ Q K ++V+ N
Sbjct: 158 NTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ--KSSMVSNN 209
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 84 MIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
M N+D + +NI++ GLCK GK + ++ G++P+V TYN ++
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSS 60
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ +A+ + M + G+ PD Y +I+GLCK + +A
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA 99
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 6/172 (3%)
Query: 16 GKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLK 75
GK+ P V YS I + C+ + +A + +R L + +T+ S+++G G L+
Sbjct: 812 GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQ 871
Query: 76 EAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLM 129
+A+ ++ M P + + L+ KE ++ V M + +P+VVTY +++
Sbjct: 872 KALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMI 931
Query: 130 DGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
GY +G+V +A + +M + G +PD + Y+ IN LC+ ++AL LLS
Sbjct: 932 CGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLS 983
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-----M 114
F L+ FC+ G +KEA+ L+ E+ K + +A F IL+ GLC+ +++ + M
Sbjct: 331 AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIM 390
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
K+ + Y ++ GY +V+KA + + +SG P V YT I+ L K+K +
Sbjct: 391 KRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFE 450
Query: 175 EALTLLS 181
+ L +
Sbjct: 451 KGCNLFN 457
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFC--KDKLVSDAFDLYSEMLAKRILPNVF 59
G T +++ ++++ ++P+ + +I C K + V +A + EM+ +P+
Sbjct: 727 GLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRE 786
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMK---- 115
+ C VG K+A S LD + P ++I + LC+ GK+ + +
Sbjct: 787 LVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASF 845
Query: 116 QGVKP--NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+G + + TY S++ G G++ KA D +NSM + G P V YT +I K K +
Sbjct: 846 EGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQL 905
Query: 174 DEAL 177
++ L
Sbjct: 906 EKVL 909
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L+L+R+++ K + + + ++ C+ + DA ++ +++ +R L +
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV-DIMKRRKLDD---- 397
Query: 62 NSLIYGFCIVGLLKE-----AISLLDEMIMKNIDPNAYTFNILLDGLCK-----EG-KVL 110
S +YG I G L++ A+ + + P T+ ++ L K +G +
Sbjct: 398 -SNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLF 456
Query: 111 AVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
M++ G++P+ V +++ G+ V +A + +SM + G+ P + Y++ + LC+
Sbjct: 457 NEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRS 516
Query: 171 KMVDEALTLLS 181
DE + + +
Sbjct: 517 SRYDEIIKIFN 527
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L+ +K+EG+ P+VV Y+ +I + V +A++ + M + P+ T++ I
Sbjct: 909 LETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
C ++A+ LL EM+ K I P+ F + GL +EGK
Sbjct: 969 LCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+L+ ++E ++ ++ +I + K K + ++ +M + +N +I
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKPNVV----- 123
CI G A+ EM+ K I T+ +LLD + K KV V Q + ++V
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVV---QSIADDMVRICEI 326
Query: 124 ----TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+ L+ +C+ G++ +A +++ + + D + + +++ GLC+ + +AL +
Sbjct: 327 SEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEI 386
Query: 180 LSLQK 184
+ + K
Sbjct: 387 VDIMK 391
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 45 LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
L+ EM + L T+ +I + GL AI EM + P++ TF L+ LC
Sbjct: 700 LFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC 759
Query: 105 -KEG-------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD 156
K+G + M++ G P+ + C VG AK L+S+ + G P
Sbjct: 760 EKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PV 818
Query: 157 VQCYTVIINGLCKIKMVDEALTLLS 181
Y++ I LC+I ++EAL+ L+
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELA 843
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 44 DLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL 103
+L+ EM + ++ N T+ +LI G G A + EM+ + P+ T+NILLDGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 104 CKEGKVLAVMMK---------------QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
CK GK+ ++ +GVKPNVVTY +++ G+C G +A + M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 149 AQSGVTPDVQCYTVIIN 165
+ G PD Y +I
Sbjct: 122 KEDGPLPDSGTYNTLIR 138
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 78 ISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDG 131
+ L EM + + N T+ L+ GL + G ++ M+ GV P+++TYN L+DG
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 132 YC---------LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
C + G+V D+ S++ GV P+V YT +I+G CK +EA TL
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 183 QK 184
K
Sbjct: 121 MK 122
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKD-KL--------VSDAFDLYSEMLAK 52
G + ++ +++ V P+++ Y+ ++ CK+ KL V D +DL+ + K
Sbjct: 30 GDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLK 89
Query: 53 RILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA 111
+ PNV T+ ++I GFC G +EA +L +M P++ T+N L+ ++G A
Sbjct: 90 GVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 148
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K V PNVV Y+T+I FCK +A+ L+ +M LP+ T+N+LI G
Sbjct: 89 KGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 148
Query: 77 AISLLDEMIMKNIDPNAYTFNILLD 101
+ L+ EM +A T+ ++ D
Sbjct: 149 SAELIKEMRSCRFAGDASTYGLVTD 173
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 11/186 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK-----RILP 56
GQTR ++ L +++ P+ +Y+ +I + + + A + L K R P
Sbjct: 147 GQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQP 206
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVL 110
NV T+N L+ F G + + +L ++ M + P+ YTFN ++D K G VL
Sbjct: 207 NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVL 266
Query: 111 AVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
M KP+++T+N L+D Y E K + S+ +S P + + +I K
Sbjct: 267 TRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA 326
Query: 171 KMVDEA 176
+M+D+A
Sbjct: 327 RMIDKA 332
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 16/182 (8%)
Query: 3 QTRASLQLLRKIEGKL--------VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRI 54
TR + L K+ G L PNVV Y+ ++ +F + V L+ ++ +
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 55 LPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------K 108
P+V+TFN ++ + G++KE ++L M P+ TFN+L+D K+ +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 109 VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYT--VIING 166
+M+ KP + T+NS++ Y ++KA+ + M P Y +++ G
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 167 LC 168
C
Sbjct: 360 YC 361
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 8 LQLLRKIEG-KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
L++ R ++ + +P+ +YS +I K A L+SEM P+ +N+LI
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 67 GFCI----VGLLKEAISLLDEMI-MKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
L++ LD+M ++ PN T+NILL + GKV V +
Sbjct: 177 AHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM 236
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
V P+V T+N +MD Y G + + + +L M + PD+ + V+I+ K
Sbjct: 237 SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N+ ++ ++ +C +A +++ +M + P+ +FN+L+ C LL EA L
Sbjct: 349 NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLV 135
EM KN+ P+ YT+ +L+D KEGK+ M++ ++PN+ YN L D
Sbjct: 409 GEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKA 468
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G+++ AK + M S + D + Y I+ L + +DE L ++
Sbjct: 469 GKLDDAKSFFDMMV-SKLKMDDEAYKFIMRALSEAGRLDEMLKIV 512
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 15 EGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILP-----NVFTFNSLIYGFC 69
E V + + Y+ ++ + ++ +A L+ + + P N+ TFN ++ G+C
Sbjct: 302 ENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYC 361
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAVMMKQGVKPNVV 123
G +EA+ + +M P+ +FN L++ LC + K+ M ++ VKP+
Sbjct: 362 AGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEY 421
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
TY LMD G++++ +M +S + P++ Y + + L K +D+A + +
Sbjct: 422 TYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDM 480
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++++ R++ P+ + ++ ++ C ++L+++A LY EM K + P+ +T+
Sbjct: 364 GKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-----LAVMMKQ 116
L+ G + E + M+ N+ PN +N L D L K GK+ MM
Sbjct: 424 GLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVS 483
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
+K + Y +M G +++ I++ M
Sbjct: 484 KLKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 81.6 bits (200), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 11/183 (6%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ R L+L+ + EG +Y+ + C ++ ++ ML P+ +T
Sbjct: 394 GKARNVLELMLRKEGA---DRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTL 450
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIM-KNIDPNAYTFNILLDGLCKEGKVLA-------VM 113
N++I G C +G + +A+ +LD+M+ K P+A T N ++ GL +G+ VM
Sbjct: 451 NTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+ +KP VV YN+++ G + + ++A + + ++ VT D Y +II+GLC V
Sbjct: 511 PENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV 570
Query: 174 DEA 176
D A
Sbjct: 571 DMA 573
Score = 80.5 bits (197), Expect = 6e-16, Method: Composition-based stats.
Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y +I S C+ + A + M +K + P ++N++I+G C G A LL+E
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGS 369
Query: 86 MKNIDPNAYTFNILLDGLCKE---GK---VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
P+ YT+ +L++ LCKE GK VL +M+++ YN + G C++
Sbjct: 370 EFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPT 429
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ ++L SM Q PD +INGLCK+ VD+A+ +L
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVL 470
Score = 80.1 bits (196), Expect = 8e-16, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 8/187 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + QLL + P+ Y ++ S CK+ A ++ ML K +
Sbjct: 356 GGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIY 415
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N + G C++ E +++L M+ + P+ YT N +++GLCK G KVL MM
Sbjct: 416 NIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMT 475
Query: 116 -QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNS-MAQSGVTPDVQCYTVIINGLCKIKMV 173
+ P+ VT N++M G G +A D+LN M ++ + P V Y +I GL K+
Sbjct: 476 GKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKG 535
Query: 174 DEALTLL 180
DEA+++
Sbjct: 536 DEAMSVF 542
Score = 67.0 bits (162), Expect = 8e-12, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 10/189 (5%)
Query: 1 MGQTRASLQLLRKI-EGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK-RILPNV 58
MG+ ++++L + GK P+ V +T++ +A D+ + ++ + +I P V
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGV 519
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV-LA------ 111
+N++I G + EA+S+ ++ ++ ++ T+ I++DGLC KV +A
Sbjct: 520 VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDD 579
Query: 112 VMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIK 171
V+ G + + Y + + G C G ++ A L +A SG P+V CY +I +
Sbjct: 580 VIWPSG-RHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSG 638
Query: 172 MVDEALTLL 180
+ EA +L
Sbjct: 639 LKREAYQIL 647
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEML-AKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
P+ +T+I CK V DA + +M+ K P+ T N+++ G G +EA+
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 80 LLDEMIMKN-IDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
+L+ ++ +N I P +N ++ GL K K V + K V + TY ++DG
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
C+ +V+ AK + + D Y + GLC+ + +A L
Sbjct: 565 CVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFL 612
Score = 63.5 bits (153), Expect = 9e-11, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 46/209 (22%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+P+VV ++T+IG +C+ + + A ++ EM I PN T + LI GF + ++
Sbjct: 194 LPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRK 253
Query: 80 LLDEM--IMKN---IDPNAYTFNILLDGLCKEG--------------------------- 107
L+ E+ MKN A F L+D +C+EG
Sbjct: 254 LMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHM 313
Query: 108 --------------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
+++ +M +G+KP +YN+++ G C G +A +L ++
Sbjct: 314 IDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEF 373
Query: 154 TPDVQCYTVIINGLCKIKMVDEALTLLSL 182
P Y +++ LCK +A +L L
Sbjct: 374 FPSEYTYKLLMESLCKELDTGKARNVLEL 402
Score = 60.5 bits (145), Expect = 6e-10, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 48/212 (22%)
Query: 6 ASLQLLRKIEG--KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNS 63
++L ++ ++ G K +P++ Y+ ++ C V DA L +M + LP+V TF +
Sbjct: 143 STLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTT 202
Query: 64 LIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL----------------------- 100
LI G+C + L+ A + DEM + I PN+ T ++L+
Sbjct: 203 LIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYM 262
Query: 101 -----------------DGLCKEGKV-----LAVMMKQGVKPNV-VTYNSLMDGYCLVGE 137
D +C+EG +A M NV Y ++D C
Sbjct: 263 KNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRR 322
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+ A I+ M G+ P Y II+GLCK
Sbjct: 323 NHGAARIVYIMKSKGLKPRRTSYNAIIHGLCK 354
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 2 GQTRASLQLLRKI--EGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVF 59
G+ +L +L ++ E K + P VV Y+ +I K +A ++ ++ + +
Sbjct: 497 GRAEEALDVLNRVMPENK-IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADST 555
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVM 113
T+ +I G C+ + A D++I + +A+ + L GLC+ G + L +
Sbjct: 556 TYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDL 615
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVI 163
G PNVV YN+++ G +A IL M ++G PD + ++
Sbjct: 616 ADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 11/186 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK-----RILP 56
GQTR ++ L +++ P+ +Y+ +I + + + A + L K R P
Sbjct: 147 GQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQP 206
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVL 110
NV T+N L+ F G + + +L ++ M + P+ YTFN ++D K G VL
Sbjct: 207 NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVL 266
Query: 111 AVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
M KP+++T+N L+D Y E K + S+ +S P + + +I K
Sbjct: 267 TRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKA 326
Query: 171 KMVDEA 176
+M+D+A
Sbjct: 327 RMIDKA 332
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 16/182 (8%)
Query: 3 QTRASLQLLRKIEGKL--------VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRI 54
TR + L K+ G L PNVV Y+ ++ +F + V L+ ++ +
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 55 LPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------K 108
P+V+TFN ++ + G++KE ++L M P+ TFN+L+D K+ +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 109 VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYT--VIING 166
+M+ KP + T+NS++ Y ++KA+ + M P Y +++ G
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 167 LC 168
C
Sbjct: 360 YC 361
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 8 LQLLRKIEG-KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
L++ R ++ + +P+ +YS +I K A L+SEM P+ +N+LI
Sbjct: 117 LEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT 176
Query: 67 GFCI----VGLLKEAISLLDEMI-MKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
L++ LD+M ++ PN T+NILL + GKV V +
Sbjct: 177 AHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM 236
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
V P+V T+N +MD Y G + + + +L M + PD+ + V+I+ K
Sbjct: 237 SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 29 IIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKN 88
+ + KD +A +L+S++ K +P+V +++ + G KE + + M+
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 89 IDPNAYTFNILLDGLCKEGKV-------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKA 141
+ PNAYT+++L+ GL +GK L MM G+ PN TY ++ + + G+ A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 142 KDILNSMAQSGVTPDVQC 159
+++L M G PD +
Sbjct: 323 RELLQEMKGKGFVPDEKA 340
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+T +L+L +I+ K MP+VV ++ I+ ++ + ++ MLA + PN +T+
Sbjct: 211 GRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTY 270
Query: 62 NSLIYGFCIVG-LLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
+ LI G G K+A L EM+ + PNA T+ + + +EGK
Sbjct: 271 SVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGK 318
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 81.3 bits (199), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 7/187 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ ++++L +++ + P +Y+T++G + K V A DL+ EM P V+T
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYT 305
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV---LAVMMKQG 117
+ LI G G + EA +M+ + P+ N L++ L K G+V V + G
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 118 V---KPNVVTYNSLMDG-YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
+ P VV+YN+++ + V++ + M V+P Y+++I+G CK V
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 174 DEALTLL 180
++AL LL
Sbjct: 426 EKALLLL 432
Score = 77.0 bits (188), Expect = 7e-15, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 42/206 (20%)
Query: 21 PNVVMYSTIIGSFCKDKL-VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
P VV Y+T+I + + K VS+ + +M A + P+ FT++ LI G+C +++A+
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCK---------------------EGKVLAVMMK--- 115
LL+EM K P + L++ L K +V AVM+K
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFG 490
Query: 116 -----------------QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ 158
QG P+V YN+LM G G +N+A +L M ++G D+
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 159 CYTVIINGLCKIKMVDEALTLLSLQK 184
+ +I+NG + + A+ + K
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIK 576
Score = 73.6 bits (179), Expect = 8e-14, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
+Y+ +I F K +S+A DL++EM + P+V+ +N+L+ G G++ EA SLL +M
Sbjct: 481 VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Query: 85 IMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
+ + NI+L+G + G ++ + G+KP+ VTYN+L+ + G
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMF 600
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+A ++ M G D Y+ I++ +
Sbjct: 601 EEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ + YS +I S+ K A L+ EM + P + +L+ + VG +++A+ L
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCL 134
+EM P YT+ L+ GL K G+V M++ G+ P+VV N+LM+
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIK 171
VG V + ++ + M TP V Y +I L + K
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESK 387
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 10/190 (5%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT-- 60
+ +L LL +++ K P Y ++I + K K A +L+ E+ K NV +
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL--KENFGNVSSRV 481
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMM 114
+ +I F G L EA+ L +EM + P+ Y +N L+ G+ K G + L M
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ G + ++ ++N +++G+ G +A ++ ++ SG+ PD Y ++ M +
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 175 EALTLLSLQK 184
EA ++ K
Sbjct: 602 EAARMMREMK 611
Score = 68.2 bits (165), Expect = 3e-12, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 7/182 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK-RILPNVFTFNSLI 65
+L + + +G+ P Y+++I ++ ++Y+EM + P+ T+++LI
Sbjct: 181 ALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALI 240
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVK 119
+ +G AI L DEM + P + LL K GKV M + G
Sbjct: 241 SSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS 300
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
P V TY L+ G G V++A M + G+TPDV ++N L K+ V+E +
Sbjct: 301 PTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNV 360
Query: 180 LS 181
S
Sbjct: 361 FS 362
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P V+ S ++ + + K+VS A ++ + ++ P T+NS+I G ++
Sbjct: 160 VSPAVL--SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVH 217
Query: 79 SLLDEMIMK-NIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDG 131
+ EM + + P+ T++ L+ K G ++ M ++P Y +L+
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
Y VG+V KA D+ M ++G +P V YT +I GL K VDEA
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEA 322
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ ++ L +++ + P+V Y+ ++ K ++++A L +M ++ +
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSH 552
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N ++ GF G+ + AI + + + I P+ T+N LL G +++ M
Sbjct: 553 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNS 147
+G + + +TY+S++D VG V+ KD ++S
Sbjct: 613 KGFEYDAITYSSILDA---VGNVDHEKDDVSS 641
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 94/179 (52%), Gaps = 7/179 (3%)
Query: 9 QLLRKIEGKL-VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+L ++ GKL + P++V Y+T+I + C+ + +A L E+ K + P++ TFN+L+
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
+ G + + +M+ KN+ + T+N L GL E K + + G+KP+
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
V ++N+++ G G++++A+ + + G PD + +++ +CK + A+ L
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 5 RASLQLLRKIEGKLVMPNVVM----YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+ +L +I K+V NV + Y+ + + + +L+ E+ A + P+VF+
Sbjct: 228 KGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFS 287
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG 107
FN++I G G + EA + E++ P+ TF +LL +CK G
Sbjct: 288 FNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 91/167 (54%), Gaps = 6/167 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++V++++++ F ++ + A + + + P++ T+NSL+ + G +A +
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
L + + P+ ++N ++ G C+ G ++L+ M ++G++P + TYN+ + GY
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTA 748
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+G + +D++ MA++ P+ + ++++G C+ EA+ +S
Sbjct: 749 MGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVS 795
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 101/187 (54%), Gaps = 7/187 (3%)
Query: 1 MGQT-RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVF 59
MG++ R L +L ++ K + + ST++ + ++ L+ +A + ++E+ + P
Sbjct: 258 MGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTV 317
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD-----GLCKEGK-VLAVM 113
T+N+L+ F G+ EA+S+L EM + ++ T+N L+ G KE V+ +M
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
K+GV PN +TY +++D Y G+ ++A + SM ++G P+ Y +++ L K
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 174 DEALTLL 180
+E + +L
Sbjct: 438 NEMIKML 444
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 65/112 (58%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++L+ +E + P++V Y+T+I FC+ L+ +A + SEM + I P +FT+
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTY 739
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM 113
N+ + G+ +G+ E +++ M + PN TF +++DG C+ GK M
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+L I + P++V Y++++ + + A ++ + ++ P++ ++N++I GFC
Sbjct: 653 ILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFC 712
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVV 123
GL++EA+ +L EM + I P +T+N + G G V+ M K +PN +
Sbjct: 713 RRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNEL 772
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSM 148
T+ ++DGYC G+ ++A D ++ +
Sbjct: 773 TFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCK-DKLVSDAFDLYSEMLAKRILPNVFT 60
G+ ++ L +++ P +V Y+ I+ F K + + EM +K + + FT
Sbjct: 224 GKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFT 283
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
++++ GLL+EA E+ +P T+N LL K G VL M
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME 343
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ + VTYN L+ Y G +A ++ M + GV P+ YT +I+ K D
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 175 EALTLL 180
EAL L
Sbjct: 404 EALKLF 409
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 87/183 (47%), Gaps = 13/183 (7%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G R + + +++ P V Y+ ++ F K + ++A + EM + T+
Sbjct: 295 GLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTY 354
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N L+ + G KEA +++ M K + PNA T+ ++D K G K+ M +
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILN---SMAQSGVTPDVQCYTVIINGLCKIKM 172
G PN TYN+++ L+G+ +++ +++ M +G +P+ + ++ LC K
Sbjct: 415 AGCVPNTCTYNAVLS---LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKG 470
Query: 173 VDE 175
+D+
Sbjct: 471 MDK 473
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 75/174 (43%), Gaps = 6/174 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L+L ++ +PN Y+ ++ K ++ + +M + PN T+
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
N+++ G+ K + EM +P+ TFN L+ + G K+ M +
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
G V TYN+L++ G+ +++++ M G P Y++++ K
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 35 KDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAY 94
++ S A L ++ + L +V + ++++ + G ++AI L + M P
Sbjct: 187 RESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLV 246
Query: 95 TFNILLDGLCKEGK-------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNS 147
T+N++LD K G+ VL M +G+K + T ++++ G + +AK+
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 148 MAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ G P Y ++ K + EAL++L
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFC-KDKLVSDAFDLYSEMLAK-RILPNVFTFNSL 64
+ ++++K+E V P+ V Y+TI + K + V ++ +M+ K + PN T +
Sbjct: 207 AWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIV 266
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC----KEG--KVLAVMMKQGV 118
+ G+C G +++ + + M ++ N FN L++G ++G +VL +M + V
Sbjct: 267 VGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNV 326
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
K +V+TY+++M+ + G + KA + M ++GV PD Y+++ G + K +A
Sbjct: 327 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 386
Query: 179 LLS 181
LL
Sbjct: 387 LLE 389
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 104/189 (55%), Gaps = 7/189 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK-RILPNVFT 60
G+ R L+ +R+++ V N+V+++++I F + + D D ++ + + +V T
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV-EVMDRDGIDEVLTLMKECNVKADVIT 332
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL--CKEGKVLAVMMKQGV 118
+++++ + G +++A + EM+ + P+A+ ++IL G KE K +++ +
Sbjct: 333 YSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 392
Query: 119 ---KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
+PNVV + +++ G+C G ++ A + N M + GV+P+++ + ++ G ++K +
Sbjct: 393 VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWK 452
Query: 176 ALTLLSLQK 184
A +L + +
Sbjct: 453 AEEVLQMMR 461
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 7/164 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V +V+ YST++ ++ + A ++ EM+ + P+ ++ L G+ K+A
Sbjct: 326 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 385
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
LL+ +I+++ PN F ++ G C G +V M K GV PN+ T+ +LM GY
Sbjct: 386 ELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 444
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
V + KA+++L M GV P+ + ++ + DE+
Sbjct: 445 LEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 488
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 49/206 (23%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
+ ++ +I +F + + DA +M + P T+N+LI G+ I G + + LLD
Sbjct: 116 IFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDL 175
Query: 84 MIMK-NID--PNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSL------ 128
M+ + N+D PN TFN+L+ CK+ KV + M + GV+P+ VTYN++
Sbjct: 176 MLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQ 235
Query: 129 -------------------------------MDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
+ GYC G V + M + V ++
Sbjct: 236 KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANL 295
Query: 158 QCYTVIINGLCKI---KMVDEALTLL 180
+ +ING ++ +DE LTL+
Sbjct: 296 VVFNSLINGFVEVMDRDGIDEVLTLM 321
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+++ Y+T++ + K + SE+ + FN++I F G +++A+
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQA 137
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQG---VKPNVVTYNSLMDG 131
L +M ++P T+N L+ G GK +L +M+++G V PN+ T+N L+
Sbjct: 138 LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVI 163
+C +V +A +++ M + GV PD Y I
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ A+ +L ++++ + + P+ ++S+++ S K + + +Y EM P+ F
Sbjct: 327 GRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMF 386
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
SLI + G L A+ L DEM PN + ++++ K GK V M K
Sbjct: 387 VSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G P TY+ L++ + G+V+ A I NSM +G+ P + Y ++ L ++VD
Sbjct: 447 AGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDV 506
Query: 176 ALTLL 180
A +L
Sbjct: 507 AGKIL 511
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y II S K + AF L+ +M +++ P+ F+SL+ G L ++ + EM
Sbjct: 316 YELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQ 375
Query: 86 MKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVN 139
P+A F L+D K GK+ M K G +PN Y +++ + G++
Sbjct: 376 GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLE 435
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
A + M ++G P Y+ ++ VD A+ +
Sbjct: 436 VAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 79.3 bits (194), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+L++K + K+ V + ++ S + KL +A L+ + L +R PN+ T+ L+ G
Sbjct: 252 FELMKKYKFKI---GVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNG 307
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
+C V L EA + ++MI + + P+ N++L+GL + K + VM +G PN
Sbjct: 308 WCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPN 367
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
V +Y ++ +C + A + + M SG+ PD YT +I G K +D LL
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+++L ++ K PNV Y+ +I FCK + A + + +M+ + P+ + LI
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
GF L LL EM K P+ T+N L+ + + ++ M++ ++P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEP 471
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
++ T+N +M Y + + + M + G+ PD YTV+I GL
Sbjct: 472 SIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGL 518
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN++ Y+ ++ +C+ + + +A ++++M+ + + P++ N ++ G +AI L
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCL 134
M K PN ++ I++ CK+ + M+ G++P+ Y L+ G+
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+++ ++L M + G PD + Y +I + KM + A
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHA 457
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y++++ K + + EM K +L + TF + F K+A+ + + M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 86 MKNIDPNAYTFNILLDGLC-----KEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
T N LLD L KE +VL +K+ PN++TY L++G+C V + +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIE 316
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
A I N M G+ PD+ + V++ GL + + +A+ L + K
Sbjct: 317 AARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMK 360
Score = 64.3 bits (155), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 7/158 (4%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
++ + +F K A ++ M + V T N L+ L KEA L D++
Sbjct: 232 FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL- 290
Query: 86 MKNIDPNAYTFNILLDGLCK------EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ PN T+ +LL+G C+ ++ M+ QG+KP++V +N +++G + +
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKS 350
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
A + + M G P+V+ YT++I CK ++ A+
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAI 388
Score = 57.0 bits (136), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+LL++++ K P+ Y+ +I K+ A +Y++M+ I P++ TFN ++ +
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
+ + ++ +EMI K I P+ ++ +L+ GL EGK L M+ +G+K +
Sbjct: 484 FMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPL 543
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQ 150
+ YN + G+ +I +AQ
Sbjct: 544 IDYNKFAADFHRGGQ----PEIFEELAQ 567
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G T ++ + ++++ P Y+ +I + K ++ LY EM + + PN+ T+
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+L+ F GL ++A + +++ ++P+ Y +N L++ + G ++ ++M
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
G +P+ +YN ++D Y G + A+ + M + G+ P ++ + ++++ K + V
Sbjct: 385 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 45/207 (21%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V+ ++ +I ++ + +A LY ++L R +P T+ LI +C+ GL++ A +
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 81 LDEMIMKNIDP--------NAY-------------------------------TFNILLD 101
L EM ++ P NAY T+N++++
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 102 GLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTP 155
K K + M KPN+ TY +L++ + G KA++I + + G+ P
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 156 DVQCYTVIINGLCKIKMVDEALTLLSL 182
DV Y ++ + A + SL
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSL 381
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/200 (18%), Positives = 81/200 (40%), Gaps = 41/200 (20%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
S +L ++ PN+ Y+ ++ +F ++ L A +++ ++ + P+V+ +N+L+
Sbjct: 305 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 364
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------------------- 107
+ G A + M +P+ ++NI++D + G
Sbjct: 365 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 424
Query: 108 ----------------------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDIL 145
++ M + GV+P+ NS+++ Y +G+ K + IL
Sbjct: 425 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 484
Query: 146 NSMAQSGVTPDVQCYTVIIN 165
M T D+ Y ++IN
Sbjct: 485 AEMENGPCTADISTYNILIN 504
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P + + ++ ++ K + V+ + EM + P+ F NS++ + +G +
Sbjct: 422 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKME 481
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
+L EM + T+NIL++ K G ++ + ++ +P+VVT+ S + Y
Sbjct: 482 KILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 541
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
K ++ M SG PD V+++ + V++ ++L
Sbjct: 542 SRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 589
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G T ++ + ++++ P Y+ +I + K ++ LY EM + + PN+ T+
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+L+ F GL ++A + +++ ++P+ Y +N L++ + G ++ ++M
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
G +P+ +YN ++D Y G + A+ + M + G+ P ++ + ++++ K + V
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 45/207 (21%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V+ ++ +I ++ + +A LY ++L R +P T+ LI +C+ GL++ A +
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 81 LDEMIMKNIDP--------NAY-------------------------------TFNILLD 101
L EM ++ P NAY T+N++++
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 102 GLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTP 155
K K + M KPN+ TY +L++ + G KA++I + + G+ P
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 156 DVQCYTVIINGLCKIKMVDEALTLLSL 182
DV Y ++ + A + SL
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSL 359
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/200 (18%), Positives = 81/200 (40%), Gaps = 41/200 (20%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
S +L ++ PN+ Y+ ++ +F ++ L A +++ ++ + P+V+ +N+L+
Sbjct: 283 SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME 342
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------------------- 107
+ G A + M +P+ ++NI++D + G
Sbjct: 343 SYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 402
Query: 108 ----------------------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDIL 145
++ M + GV+P+ NS+++ Y +G+ K + IL
Sbjct: 403 TMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL 462
Query: 146 NSMAQSGVTPDVQCYTVIIN 165
M T D+ Y ++IN
Sbjct: 463 AEMENGPCTADISTYNILIN 482
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P + + ++ ++ K + V+ + EM + P+ F NS++ + +G +
Sbjct: 400 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKME 459
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
+L EM + T+NIL++ K G ++ + ++ +P+VVT+ S + Y
Sbjct: 460 KILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 519
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
K ++ M SG PD V+++ + V++ ++L
Sbjct: 520 SRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 567
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
S+ LL+++ K ++ + + YS ++ + K+ + A ++ EML + N F + +
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
C G +KEA LL EM + P TFN L+ G + G + VM+ +G+ P
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMP 407
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ +N ++ + VN+A +IL G PD Y+ +I G + +D+AL L
Sbjct: 408 SCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLF 467
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K + PN + +I CK+ + + DL + KR LP+V SL++ ++E
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMD 130
++SLL ++MKN+ + ++I++ KEG KV M+++G N Y +
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
C G+V +A+ +L+ M +SGV+P + + +I G + ++ L
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGL 394
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+MP+ ++ ++ S K + V+ A ++ ++ + K +P+ T++ LI GF + +A+
Sbjct: 405 LMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQAL 464
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGY 132
L EM + + P F L+ GLC GKV L +M K+ ++PN Y++L+ +
Sbjct: 465 KLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAF 524
Query: 133 CLVGEVNKAKDILNSM 148
+G+ A + N M
Sbjct: 525 QKIGDKTNADRVYNEM 540
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 8/176 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + + +LL ++E V P ++ +IG F + + M+ + ++P+ F
Sbjct: 353 GDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAF 412
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG-------KVLAVMM 114
N ++ + + A +L + I K P+ +T++ L+ G EG K+ M
Sbjct: 413 NEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFI-EGNDIDQALKLFYEME 471
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
+ + P + SL+ G C G+V + L M + + P+ Y +I KI
Sbjct: 472 YRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKI 527
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-ILPNVFT 60
G L+L +++ + + P+ +Y+ ++ + K VS+A +L M ++ I PNV T
Sbjct: 316 GSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVT 375
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV---LAVMMKQG 117
+NSLI C +EA + DEM+ K + P T++ + L +V LA M K G
Sbjct: 376 YNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMG 435
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+P V TY L+ C + + + + M + V PD+ Y V+I+GL ++EA
Sbjct: 436 CEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEA 494
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 22 NVVM--YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
N+V+ + +IGS +A ++ EM + +V +++S+I + G L + +
Sbjct: 270 NIVLNGWCNVIGS------PREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 323
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCK-----EGKVLAVMMKQ--GVKPNVVTYNSLMDGY 132
L D M + I+P+ +N ++ L K E + L M++ G++PNVVTYNSL+
Sbjct: 324 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 383
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
C + +AK + + M + G+ P ++ Y + L + +E LL+
Sbjct: 384 CKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLA 429
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 9/170 (5%)
Query: 15 EGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLL 74
E K + PNVV Y+++I CK + +A ++ EML K + P + T+++ + I+
Sbjct: 365 EEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR---ILRTG 421
Query: 75 KEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSL 128
+E LL +M +P T+ +L+ LC+ V M ++ V P++ +Y +
Sbjct: 422 EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVM 481
Query: 129 MDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
+ G L G++ +A M G+ P+ +I + + ++ +T
Sbjct: 482 IHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQRIT 531
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 11 LRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCI 70
+RK LV ++ +I +C V A + + ++ + F SL+ C
Sbjct: 187 MRKFSPSLVNSQTLL--IMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCR 244
Query: 71 VGLLKEAISLLDEMIMKNIDP-NAYTFNILLDGLC-------KEGKVLAVMMKQGVKPNV 122
+ +A L+ K+ P +A +FNI+L+G C + +V M GVK +V
Sbjct: 245 YKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDV 302
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
V+Y+S++ Y G +NK + + M + + PD + Y +++ L K V EA L+
Sbjct: 303 VSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLM 360
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 73/139 (52%), Gaps = 7/139 (5%)
Query: 52 KRILPNVFT---FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL---CK 105
KR++P+ F FN+L+ C + +A ++ + P+ TFNILL G +
Sbjct: 171 KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGWKSSEE 229
Query: 106 EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
M +G+KP+VVTYNSL+D YC E+ KA +++ M + TPDV YT +I
Sbjct: 230 AEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIG 289
Query: 166 GLCKIKMVDEALTLLSLQK 184
GL I D+A +L K
Sbjct: 290 GLGLIGQPDKAREVLKEMK 308
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 90/161 (55%), Gaps = 10/161 (6%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
++ ++ + C++K ++DA ++Y L + P++ TFN L+ G+ +EA + +EM
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHS-LKHQFQPDLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 86 MKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
K + P+ T+N L+D CK+ K++ M ++ P+V+TY +++ G L+G+ +
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
KA+++L M + G PDV Y I C + + +A L+
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLV 339
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 14 IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGL 73
++GK + P+VV Y+++I +CKD+ + A+ L +M + P+V T+ ++I G ++G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 74 LKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAVMMKQGVKPNVVTYNS 127
+A +L EM P+ +N + C K++ M+K+G+ PN TYN
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 128 LMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
L ++ ++ ++ M + P+ Q +I + + VD A+ L
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRL 408
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 3 QTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFN 62
+ + +L+ K+ + P+V+ Y+T+IG A ++ EM P+V +N
Sbjct: 261 EIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYN 320
Query: 63 SLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL 100
+ I FCI L +A L+DEM+ K + PNA T+N+
Sbjct: 321 AAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 78.2 bits (191), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+L++K + K+ V + ++ S + KL +A L+ + L +R PN+ T+ L+ G
Sbjct: 251 FELMKKYKFKI---GVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNG 306
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
+C V L EA + ++MI + P+ N++L+GL + K + VM +G PN
Sbjct: 307 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 366
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
V +Y ++ +C + A + + M SG+ PD YT +I G K +D LL
Sbjct: 367 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Score = 77.8 bits (190), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+++L ++ K PNV Y+ +I FCK + A + + +M+ + P+ + LI
Sbjct: 351 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
GF L LL EM K P+ T+N L+ + + ++ M++ ++P
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 470
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
++ T+N +M Y + + + + M + G+ PD YTV+I GL
Sbjct: 471 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 517
Score = 64.3 bits (155), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y++++ K + + EM K +L + TF + F K+A+ + + M
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMK 255
Query: 86 MKNIDPNAYTFNILLDGLC-----KEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
T N LLD L KE +VL +K+ PN++TY L++G+C V + +
Sbjct: 256 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIE 315
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
A I N M G+ PD+ + V++ GL + +A+ L + K
Sbjct: 316 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 359
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+LL++++ K P+ Y+ +I K+ +Y++M+ I P++ TFN ++ +
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 482
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
+ + ++ DEMI K I P+ ++ +L+ GL EGK L M+ +G+K +
Sbjct: 483 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPL 542
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQ 150
+ YN + G+ +I +AQ
Sbjct: 543 IDYNKFAADFHRGGQ----PEIFEELAQ 566
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 78.2 bits (191), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+L++K + K+ V + ++ S + KL +A L+ + L +R PN+ T+ L+ G
Sbjct: 252 FELMKKYKFKI---GVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMTYTVLLNG 307
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
+C V L EA + ++MI + P+ N++L+GL + K + VM +G PN
Sbjct: 308 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 367
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
V +Y ++ +C + A + + M SG+ PD YT +I G K +D LL
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Score = 77.8 bits (190), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+++L ++ K PNV Y+ +I FCK + A + + +M+ + P+ + LI
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKP 120
GF L LL EM K P+ T+N L+ + + ++ M++ ++P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 471
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
++ T+N +M Y + + + + M + G+ PD YTV+I GL
Sbjct: 472 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 518
Score = 64.3 bits (155), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y++++ K + + EM K +L + TF + F K+A+ + + M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 86 MKNIDPNAYTFNILLDGLC-----KEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
T N LLD L KE +VL +K+ PN++TY L++G+C V + +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIE 316
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
A I N M G+ PD+ + V++ GL + +A+ L + K
Sbjct: 317 AARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 360
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+LL++++ K P+ Y+ +I K+ +Y++M+ I P++ TFN ++ +
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
+ + ++ DEMI K I P+ ++ +L+ GL EGK L M+ +G+K +
Sbjct: 484 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPL 543
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQ 150
+ YN + G+ +I +AQ
Sbjct: 544 IDYNKFAADFHRGGQ----PEIFEELAQ 567
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 83/150 (55%), Gaps = 11/150 (7%)
Query: 40 SDAFDL----YSEMLAK-RILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAY 94
S FDL + E+ K I P+V ++N+LI G C G EA++L+DE+ K + P+
Sbjct: 154 SKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHI 213
Query: 95 TFNILLD-----GLCKEG-KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
TFNILL G +EG ++ A M+++ VK ++ +YN+ + G + + + + + +
Sbjct: 214 TFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKL 273
Query: 149 AQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
+ + PDV +T +I G +DEA+T
Sbjct: 274 KGNELKPDVFTFTAMIKGFVSEGKLDEAIT 303
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 91/190 (47%), Gaps = 8/190 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIG-SFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G ++ L+ +IE K + P+ + ++ ++ S+ K K + +++ M+ K + ++ +
Sbjct: 191 GSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF-EEGEQIWARMVEKNVKRDIRS 249
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------ 114
+N+ + G + +E +SL D++ + P+ +TF ++ G EGK+ +
Sbjct: 250 YNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIE 309
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
K G +P +NSL+ C G++ A ++ + + D +++ L K D
Sbjct: 310 KNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQD 369
Query: 175 EALTLLSLQK 184
EA ++ L K
Sbjct: 370 EAEEIVELAK 379
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 10 LLRKIEGKL-VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
+ +++ GKL + P+V Y+T+I C ++A L E+ K + P+ TFN L++
Sbjct: 163 IFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHES 222
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
G +E + M+ KN+ + ++N L GL E K + + +KP+V
Sbjct: 223 YTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDV 282
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
T+ +++ G+ G++++A + ++G P + ++ +CK ++ A L
Sbjct: 283 FTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYEL 339
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK-------EGKVLAVMMKQG 117
+YG VG+ + A + DEM +N A +FN LL+ EG + K
Sbjct: 115 LYG--RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLS 172
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
++P+V +YN+L+ G C G +A +++ + G+ PD + ++++
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLH 220
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 91/182 (50%), Gaps = 5/182 (2%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +++L R + P+V + + +I + C K + +A +++ E+ K PNV T+
Sbjct: 296 GKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTY 355
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMK--NIDPNAYTFNILLDGLCKEGKV---LAVMMKQ 116
NSL+ C + ++ L++EM +K + PN TF+ LL + V L M K
Sbjct: 356 NSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKN 415
Query: 117 GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ YN + Y + K ++I + M +SG+ PD + YT+ I+GL + EA
Sbjct: 416 KCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEA 475
Query: 177 LT 178
L+
Sbjct: 476 LS 477
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------L 110
++ N ++ G+C++G + EA ++I P+ ++ +++ L K+GK+
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 111 AVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
M P+V N+++D C + +A ++ +++ G P+V Y ++ LCKI
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 171 KMVDEALTLLS 181
+ ++ L+
Sbjct: 366 RRTEKVWELVE 376
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 5/161 (3%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
++Y+ I+ K + + ++ EM + N T+ L+ + + EA+ + +
Sbjct: 144 MLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFER 203
Query: 84 MIMKNIDPNAYTFNILLDGLCKEGKV-----LAVMMKQGVKPNVVTYNSLMDGYCLVGEV 138
ID + F+ LL LC+ V L ++ ++ N +++G+C++G V
Sbjct: 204 RKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNV 263
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
++AK + S PDV Y +IN L K + +A+ L
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMEL 304
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 22/197 (11%)
Query: 10 LLRKIEGKLVMPNVVMYSTI---IGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
LR++ + NVV ++I + ++ V +A + M P+V+ +N++I
Sbjct: 149 FLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIIN 208
Query: 67 GFCIVGLLKEAISLLDEMIMKNI--DPNAYTFNILLDGLCKEG----------------- 107
C VG K+A LLD+M + P+ YT+ IL+ C+ G
Sbjct: 209 ALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEAN 268
Query: 108 KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
++ M+ +G P+VVTYN L+DG C + +A ++ M G P+ Y I
Sbjct: 269 RMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYY 328
Query: 168 CKIKMVDEALTLLSLQK 184
++ A+ ++ K
Sbjct: 329 SVTNEIEGAIEMMRTMK 345
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 87/221 (39%), Gaps = 55/221 (24%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK--RILPNVF 59
G + +L +++ P+V Y+TII + C+ A L +M R P+ +
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 60 TFNSLIYGFCIVGL-----------LKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
T+ LI +C G+ + EA + EM+ + P+ T+N L+DG CK +
Sbjct: 239 TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 109 V------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVN----------------------- 139
+ M +G PN VTYNS + Y + E+
Sbjct: 299 IGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYT 358
Query: 140 -------------KAKDILNSMAQSGVTPDVQCYTVIINGL 167
+A+D++ M ++G+ P Y ++ + L
Sbjct: 359 PLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 101 DGLCKEGKVLAVMMKQ-GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVT--PDV 157
+G KE MK+ KP+V YN++++ C VG KA+ +L+ M G PD
Sbjct: 178 EGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDT 237
Query: 158 QCYTVIINGLCKIKMVDEALTLLSLQKWTAKTLF 191
YT++I+ C+ M + + W A +F
Sbjct: 238 YTYTILISSYCRYGMQTGCRKAIRRRMWEANRMF 271
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++ R++ + +P+VV Y+ +I CK + A +L+ +M K +PN T+NS I +
Sbjct: 269 RMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYY 328
Query: 69 CIVGLLKEAISLLDEM-IMKNIDPNAYTFNILLDGLCK-----EGKVLAV-MMKQGVKPN 121
+ ++ AI ++ M + + P + T+ L+ L + E + L V M++ G+ P
Sbjct: 329 SVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPR 388
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
TY + D G + + L+ + G+
Sbjct: 389 EYTYKLVCDALSSEGLASTLDEELHKRMREGI 420
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 42 AFDLYSEMLAKRIL------PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYT 95
A L+ EM + + P++ T+NSLI+ C+ G K+A+ + DE+ + +P+ T
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 96 FNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMA 149
+ IL+ G CK + + M G P+ + YN L+DG +V +A + M
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 150 QSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
Q GV Y ++I+GL + + TL
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLF 417
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ Y +I CK + DA +Y EM +P+ +N L+ G + EA L
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCL 134
++M+ + + + +T+NIL+DGL + G+ A + K+G + +T++ + C
Sbjct: 382 FEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCR 441
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK----------IKMVDEALTLLSLQK 184
G++ A ++ M G + D+ + ++ G K +K + E + ++ +
Sbjct: 442 EGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLR 501
Query: 185 WTA 187
W A
Sbjct: 502 WNA 504
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 2 GQTRASLQLLRKIE------GKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL 55
G A+L L ++++ G P++ Y+++I C DA ++ E+
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 56 PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--- 112
P+ T+ LI G C + +A+ + EM P+ +N LLDG K KV
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 113 ---MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
M+++GV+ + TYN L+DG G + + + G D ++++ LC+
Sbjct: 382 FEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCR 441
Query: 170 IKMVDEALTLL 180
++ A+ L+
Sbjct: 442 EGKLEGAVKLV 452
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAV 112
+T+NS++ F G + A +LD+M + T+N+++ GL K G+ VL
Sbjct: 631 YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
+ KQG ++V YN+L++ +++A + + M +G+ PDV Y +I K
Sbjct: 691 LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Query: 173 VDEALTLL 180
+ EA L
Sbjct: 751 LKEAYKYL 758
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 41 DAFDLYSEMLAKRI-----LPNVFTFNSLIYGFCIVGLLKEAISLLDEMI-MKNIDPNAY 94
+A D +S+ R+ LP N L+ G + E + +++ MK + +
Sbjct: 190 EASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTW 249
Query: 95 TFNILLDG------------LCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAK 142
++NI + G L KE K + + P++ TYNSL+ CL G+ A
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 143 DILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+ + + SG PD Y ++I G CK +D+A+ +
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y++++ SF K A + +M ++ T+N +I G +G A ++LD +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 86 MKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ + +N L++ L K ++ M G+ P+VV+YN++++ G++
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 140 KAKDILNSMAQSGVTPDVQCYTVI 163
+A L +M +G P+ T++
Sbjct: 753 EAYKYLKAMLDAGCLPNHVTDTIL 776
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 76.3 bits (186), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 96/192 (50%), Gaps = 8/192 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+ T L+ +R+ + + P+ V Y+T++ +F L+ A + +EM + N T
Sbjct: 430 VADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRIT 489
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMK-NIDPNAYTFNILLDG---LCKEGKVLAV---M 113
+N L+ G+C + A LL EM I+P+ ++NI++DG + LA M
Sbjct: 490 YNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEM 549
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG-VTPDVQCYTVIINGLCKIKM 172
+G+ P ++Y +LM + + G+ A + + M V D+ + +++ G C++ +
Sbjct: 550 RTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGL 609
Query: 173 VDEALTLLSLQK 184
+++A ++S K
Sbjct: 610 IEDAQRVVSRMK 621
Score = 75.9 bits (185), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-ILPNVFTFNSLIYG 67
Q+L ++ V N + Y+ ++ +CK + A DL EM I P+V ++N +I G
Sbjct: 473 QVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQG-VKP 120
++ A++ +EM + I P ++ L+ G +V MM VK
Sbjct: 533 CILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKV 592
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+++ +N L++GYC +G + A+ +++ M ++G P+V Y + NG+ + + +AL L
Sbjct: 593 DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLL 651
Score = 50.8 bits (120), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 84 MIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVK---PNVVTYNSLMDGYCL 134
++ K P++ + L+ G K G+V L M +Q + P+ VTY +++ +
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G +++A+ +L MA+ GV + Y V++ G CK +D A LL
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL 510
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G A+ +L ++ G+ PN+V ++ +I K + A LY +M P+ T+
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 62 NSL--IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVM 113
+ + + G C G L+EA + EM KN P+ + +L+D K G V M
Sbjct: 538 SIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM 595
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN 165
++ G++PNV T NSL+ + V +++A ++L SM G+ P +Q YT++++
Sbjct: 596 LQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
+ ++ + +++ P+ V Y T+I K + A D+Y M + P+ FT++ +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGV 118
I G L A L EM+ + PN TFNI++ K K+ M G
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 119 KPNVVTYNSLMD--GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+P+ VTY+ +M+ G+C G + +A+ + M + PD Y ++++ K VD+A
Sbjct: 531 QPDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Score = 64.7 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 6/160 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+T++G+ + K + L EM+ PN T+N LI+ + LKEA+++ ++M
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 86 MKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+P+ T+ L+D K G + M + G+ P+ TY+ +++ G +
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
A + M G TP++ + ++I K + + AL L
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKL 521
Score = 64.3 bits (155), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 6/180 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
++ + ++++ + P+ YS II K + A L+ EM+ + PN+ TFN +I
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD-----GLCKEGK-VLAVMMKQGVKP 120
+ A+ L +M P+ T++I+++ G +E + V A M ++ P
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ Y L+D + G V+KA +M Q+G+ P+V +++ ++ + EA LL
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 38/203 (18%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK--RILPNVF---------- 59
R+++ + P+VV Y II + CK K +A ++EM + + P++F
Sbjct: 256 REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSE 315
Query: 60 -----------------------TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTF 96
T+N+L+ +C +++A +DEM +K + PNA T+
Sbjct: 316 KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTY 375
Query: 97 NILLDGLC---KEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
+I+L L + + V +P V TY ++ +C ++ A I + M GV
Sbjct: 376 DIILHHLIRMQRSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 154 TPDVQCYTVIINGLCKIKMVDEA 176
P + ++ +I LC +DEA
Sbjct: 436 LPGMHMFSSLITALCHENKLDEA 458
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 6/174 (3%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++ K++ K P++ Y+ ++ + ++ + ++ EM + P+V + +I
Sbjct: 218 KVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAH 277
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNV 122
C +EAI +EM +N P+ + F L++GL E K+ G
Sbjct: 278 CKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEA 337
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
TYN+L+ YC + A ++ M GV P+ + Y +I++ L +++ EA
Sbjct: 338 PTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEA 391
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+ +I S K K + L +M AK++L TF + + +KEAI +M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKME 189
Query: 86 MKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ FN +LD L K KV M K+ +P++ +Y L++G+ +
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+ ++ M G PDV Y +IIN CK K +EA+ +
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFN 291
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 6/165 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
++ I + + + V +A + +M FN ++ + +A + D+M
Sbjct: 165 FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMK 224
Query: 86 MKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGYCLVGEVN 139
K +P+ ++ ILL+G +E +L V M +G +P+VV Y +++ +C +
Sbjct: 225 KKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYE 284
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+A N M Q P + +INGL K +++AL K
Sbjct: 285 EAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 329
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+ ++G++C + + DA+ EM K + PN T++ +++ + KEA + M
Sbjct: 340 YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM- 398
Query: 86 MKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ +P T+ I++ C + K+ M +GV P + ++SL+ C +++
Sbjct: 399 --SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLD 456
Query: 140 KAKDILNSMAQSGVTPDVQCYT 161
+A + N M G+ P ++
Sbjct: 457 EACEYFNEMLDVGIRPPGHMFS 478
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P V Y ++ FC + + A ++ EM K +LP + F+SLI C L EA
Sbjct: 402 PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEY 461
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK 108
+EM+ I P + F+ L L EG+
Sbjct: 462 FNEMLDVGIRPPGHMFSRLKQTLLDEGR 489
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 14 IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGL 73
IE +P+V ++IIGS+ + + YS + P++ TFN LI F G+
Sbjct: 277 IEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGM 336
Query: 74 LKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNS 127
K+ S++D M + T+NI+++ K G+ V M QGVKPN +TY S
Sbjct: 337 YKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCS 396
Query: 128 LMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
L++ Y G V K +L + S V D + IIN
Sbjct: 397 LVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINA 435
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLA-KRILPNVFTFNSLIYGFCIVGLLKEAIS 79
P + +Y+++I + K +L+ AF M + P+VFTF LI C +G S
Sbjct: 177 PTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKS 236
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVK-PNVVTYNSLMDGY 132
++ EM + + T+N ++DG K G VLA M++ G P+V T NS++ Y
Sbjct: 237 IVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSY 296
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
+ K + + GV PD+ + ++I K M
Sbjct: 297 GNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGM 336
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 102/189 (53%), Gaps = 11/189 (5%)
Query: 2 GQTRASLQLLRKIEGKL-VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G+T ++ R++E ++ PNV Y+ ++ ++C L+S+A ++ EM + ++ ++
Sbjct: 259 GETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVA 318
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMM 114
+N++I G C + +A L +M +K I+ T+ L++G CK G V M
Sbjct: 319 YNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMK 378
Query: 115 KQGVKPNVVTYNSLMDGYCLVGE---VNKAKDIL-NSMAQSGVTPDVQCYTVIINGLCKI 170
++G + + +T +L++G C + V +A DI+ +++ ++ P CY +++ LC+
Sbjct: 379 RKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCED 438
Query: 171 KMVDEALTL 179
+D AL +
Sbjct: 439 GKMDRALNI 447
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
++ ++RK+ + + + + +I + + S+ + +Y E
Sbjct: 180 GAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYRE----------------- 222
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQ-GV 118
+ GL ++ +MI K I PNA TFN ++ +EG ++ M ++ G
Sbjct: 223 ----VFGLDDVSVDEAKKMIGK-IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGC 277
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
PNV +YN LM+ YC G +++A+ + M GV D+ Y +I GLC
Sbjct: 278 SPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLC 327
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 47/184 (25%)
Query: 13 KIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVG 72
K+ G V+ ++V Y+T+IG C + V A +L+ +M K I T+ L+ G+C G
Sbjct: 308 KVRG--VVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAG 365
Query: 73 LLKEAISLLDEMIMKNIDPNAYTFNILLDGLC---------------------------- 104
+ + + EM K + + T L++GLC
Sbjct: 366 DVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSR 425
Query: 105 -----------KEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNS 147
++GK + A M+ +G KP+ TY + +DGY +VG+ + +
Sbjct: 426 NCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIE 485
Query: 148 MAQS 151
MA+S
Sbjct: 486 MAES 489
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P+VV Y+ +I ++ + + +A ++ EML + P +N L+ F I G++++A
Sbjct: 317 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 376
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCK----EG--KVLAVMMKQGVKPNVVTYNSLMDGY 132
++ M I P+ +++ +L EG K + G +PN+VTY +L+ GY
Sbjct: 377 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 436
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN--GLCK 169
+V K ++ M SG+ + T I++ G CK
Sbjct: 437 AKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK 475
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ MY +I + K A ++S M+ K + + T+NSL+ KE +
Sbjct: 252 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKI 308
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCK---EGKVLAV---MMKQGVKPNVVTYNSLMDGYCL 134
D+M +I P+ ++ +L+ + E + L+V M+ GV+P YN L+D + +
Sbjct: 309 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 368
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
G V +AK + SM + + PD+ YT +++
Sbjct: 369 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 400
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR---ILPNVFTFNSLIY 66
+ R+++ P+ + Y I+ +F + +A +++ +L ++ + P+ ++ +IY
Sbjct: 203 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY 262
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL--DGLCKE-GKVLAVMMKQGVKPNVV 123
+ G ++A + M+ K + + T+N L+ + KE K+ M + ++P+VV
Sbjct: 263 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVV 322
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+Y L+ Y +A + M +GV P + Y ++++ MV++A T+
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 379
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 108 KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+VL+V+ K G PNV++Y +LM+ Y G+ N A+ I M SG P Y +I+
Sbjct: 167 RVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTF 226
Query: 168 C---KIKMVDEAL-TLLSLQK 184
K K +E TLL +K
Sbjct: 227 VEGDKFKEAEEVFETLLDEKK 247
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P+VV Y+ +I ++ + + +A ++ EML + P +N L+ F I G++++A
Sbjct: 310 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCK----EG--KVLAVMMKQGVKPNVVTYNSLMDGY 132
++ M I P+ +++ +L EG K + G +PN+VTY +L+ GY
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN--GLCK 169
+V K ++ M SG+ + T I++ G CK
Sbjct: 430 AKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCK 468
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ MY +I + K A ++S M+ K + + T+NSL+ KE +
Sbjct: 245 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKI 301
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCK---EGKVLAV---MMKQGVKPNVVTYNSLMDGYCL 134
D+M +I P+ ++ +L+ + E + L+V M+ GV+P YN L+D + +
Sbjct: 302 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
G V +AK + SM + + PD+ YT +++
Sbjct: 362 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR---ILPNVFTFNSLIY 66
+ R+++ P+ + Y I+ +F + +A +++ +L ++ + P+ ++ +IY
Sbjct: 196 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY 255
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL--DGLCKE-GKVLAVMMKQGVKPNVV 123
+ G ++A + M+ K + + T+N L+ + KE K+ M + ++P+VV
Sbjct: 256 MYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVV 315
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+Y L+ Y +A + M +GV P + Y ++++ MV++A T+
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF 372
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 108 KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+VL+V+ K G PNV++Y +LM+ Y G+ N A+ I M SG P Y +I+
Sbjct: 160 RVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTF 219
Query: 168 C---KIKMVDEAL-TLLSLQK 184
K K +E TLL +K
Sbjct: 220 VEGDKFKEAEEVFETLLDEKK 240
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++ R++ + PN YS +I F K + D+ LY EM + + P + +NSL+Y
Sbjct: 280 RIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVL 339
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
EA+ L+ ++ + + P++ T+N ++ LC+ GK VLA M+ + + P V
Sbjct: 340 TREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTV 399
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
T+++ ++ K ++L M S + P + + +I+ L K K + AL + +
Sbjct: 400 DTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWA 454
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKL-VSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLK 75
KL +V ++ I+ +C V++A ++ EM I PN +++ +I F VG L
Sbjct: 252 KLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLF 311
Query: 76 EAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLM 129
+++ L DEM + + P +N L+ L +E K++ + ++G+KP+ VTYNS++
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 130 DGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
C G+++ A+++L +M ++P V + + +
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV 409
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
SL+L +++ + + P + +Y++++ ++ +A L ++ + + P+ T+NS+I
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG--KVLAVMMKQGVKPNVVT 124
C G L A ++L MI +N+ P TF+ L+ + E +VL M + P T
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEET 432
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+ ++ + A I M + + + Y I GL +++A + S K
Sbjct: 433 FLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMK 492
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
+ YSTII + L + A + + M ++P+ T+++++ + G ++E +SL +
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 84 MIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
+ P+A F++L + G VL M VKPNVV YN+L++ G+
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL---LSLQKW 185
A+ + N M ++G+TP+ + T ++ K + +AL L + +KW
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKW 392
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 94/180 (52%), Gaps = 7/180 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+L++++ V PNVV+Y+T++ + + A L++EML + PN T +L+ +
Sbjct: 313 VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYG 372
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLD-----GLCKEGKVLAVMMKQGV--KPNV 122
++A+ L +EM K + +N LL+ GL +E + L MK+ V +P+
Sbjct: 373 KARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDN 432
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
+Y ++++ Y G+ KA ++ M ++GV +V T ++ L K K +D+ + + L
Sbjct: 433 FSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDL 492
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 15 EGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-ILPNVFTFNSLIYGFCIVGL 73
E KLV + + S ++ K + A D + EM + + NSL+ L
Sbjct: 197 ESKLVTLDTM--SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDA-----L 249
Query: 74 LKE-AISLLDEMIMK---NIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVV 123
+KE +I E+ +K I P+A TFNIL+ G CK K ++ +M P+VV
Sbjct: 250 VKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVV 309
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
TY S ++ YC G+ + ++L M ++G P+V YT++++ L K K V EAL
Sbjct: 310 TYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEAL 363
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G R ++L ++ PNVV Y+ ++ S K K V++A +Y +M +P+ +
Sbjct: 322 GDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK---VLAVMMK--- 115
+SLI+ G K+A + ++M + + + +N ++ + L ++ +
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Query: 116 ---QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
+ PNV TY L+ C ++ +L+ M ++ V+ DV Y ++I GLC
Sbjct: 442 EEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGK 501
Query: 173 VDEA 176
V+EA
Sbjct: 502 VEEA 505
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
RA + L++ E P+VV Y++ + ++CK+ ++ EM PNV T+ +
Sbjct: 293 RAMMDLMKVTE---FTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIV 349
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGV 118
++ + EA+ + ++M P+A ++ L+ L K G+ + M QGV
Sbjct: 350 MHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV 409
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQ---SGVTPDVQCYTVII 164
+ +V+ YN+++ A +L M +P+V+ Y ++
Sbjct: 410 RRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 7/182 (3%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G + +Q+L ++ V +V+ YST++ ++ + A ++ EM+ + P+
Sbjct: 333 VGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 392
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
++ L G+ K+A LL+ +I+++ PN F ++ G C G +V M
Sbjct: 393 YSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMC 451
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
K GV PN+ T+ +LM GY V + KA+++L M GV P+ + ++ + D
Sbjct: 452 KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTD 511
Query: 175 EA 176
E+
Sbjct: 512 ES 513
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 2 GQT-RASLQLLRK-IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVF 59
G+T RA +++ K + + PN ++G +C++ V D M R+ N+
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Query: 60 TFNSLIYGFCIV----GLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK-EGKVLAVMM 114
FNSLI GF V G+ + ++LL +M ++ + L G K + +VL +M
Sbjct: 297 VFNSLINGFVEVMDRDGIDEVTLTLL---LM------SFNEEVELVGNQKMKVQVLTLMK 347
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
+ VK +V+TY+++M+ + G + KA + M ++GV PD Y+++ G + K
Sbjct: 348 ECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPK 407
Query: 175 EALTLLS 181
+A LL
Sbjct: 408 KAEELLE 414
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 108/213 (50%), Gaps = 30/213 (14%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCK--DKLVSD---------AFDLYSEML 50
G+ R L+ +R+++ V N+V+++++I F + D+ D +F+ E++
Sbjct: 274 GRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELV 333
Query: 51 AKR--------------ILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTF 96
+ + +V T+++++ + G +++A + EM+ + P+A+ +
Sbjct: 334 GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 393
Query: 97 NILLDGL--CKEGKVLAVMMKQGV---KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQS 151
+IL G KE K +++ + +PNVV + +++ G+C G ++ A + N M +
Sbjct: 394 SILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKF 453
Query: 152 GVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
GV+P+++ + ++ G ++K +A +L + +
Sbjct: 454 GVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMR 486
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+++ Y+T++ + K + SE+ + FN++I F G +++A+
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQA 137
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQG---VKPNVVTYNSLMDG 131
L +M ++P T+N L+ G GK +L +M+++G V PN+ T+N L+
Sbjct: 138 LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVI 163
+C +V +A +++ M + GV PD Y I
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFC---KDKLVSDAFDLYSEMLAKRILPNV 58
G ++Q L K++ + P Y+T+I + K + S+ DL E + PN+
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK--------VL 110
TFN L+ +C ++EA ++ +M + P+ T+N + ++G+ V
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 111 AVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
++MK+ KPN T ++ GYC G V + M + V ++ + +ING ++
Sbjct: 249 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV 308
Query: 171 ---KMVDE-ALTLL 180
+DE LTLL
Sbjct: 309 MDRDGIDEVTLTLL 322
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
+ +L +++++G P V+ Y+TII +C+ +++ SEM A PN T+
Sbjct: 238 NRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITY 297
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+++ +EA+ + M P++ +N L+ L + G +V V M
Sbjct: 298 TTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMP 357
Query: 116 Q-GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV-TPDVQCYTVIINGLCKI--- 170
+ GV N TYNS++ YC E +KA ++L M S + PDV Y ++ K
Sbjct: 358 ELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDV 417
Query: 171 ----KMVDEALTLLSLQKWTAKTLFLIQ 194
K++ E +T L + FLIQ
Sbjct: 418 VEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 7/161 (4%)
Query: 29 IIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKN 88
++ + CK+K V A + + L I PN TFN I+G+C ++EA+ + EM
Sbjct: 196 LLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 89 IDPNAYTFNILLDGLCKE------GKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAK 142
P ++ ++ C++ ++L+ M G PN +TY ++M E +A
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 143 DILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQ 183
+ M +SG PD Y +I+ L + ++EA + ++
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVE 355
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 22/158 (13%)
Query: 34 CK-DKLVSDAFDLYSEMLAK------------RI----LPNVFTFNSLIYGFCIVGLLKE 76
CK K SDA+D+ ++L K R+ L + T ++ F G +E
Sbjct: 114 CKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEE 173
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKE-----GKVLAVMMKQGVKPNVVTYNSLMDG 131
A+ + D + ++ N + N+LLD LCKE +V+ + +K + PN T+N + G
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHG 233
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+C V +A + M G P V YT II C+
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ PN ++ I +CK V +A EM P V ++ ++I +C +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
+L EM PN+ T+ ++ L + +V M + G KP+ + YN L+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 133 CLVGEVNKAKDILN-SMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G + +A+ + M + GV+ + Y +I C D+A+ LL
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELL 388
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 15/208 (7%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
+ +L +++++G P V+ Y+TII +C+ +++ SEM A PN T+
Sbjct: 238 NRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITY 297
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
+++ +EA+ + M P++ +N L+ L + G +V V M
Sbjct: 298 TTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMP 357
Query: 116 Q-GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV-TPDVQCYTVIINGLCKI--- 170
+ GV N TYNS++ YC E +KA ++L M S + PDV Y ++ K
Sbjct: 358 ELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDV 417
Query: 171 ----KMVDEALTLLSLQKWTAKTLFLIQ 194
K++ E +T L + FLIQ
Sbjct: 418 VEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 7/161 (4%)
Query: 29 IIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKN 88
++ + CK+K V A + + L I PN TFN I+G+C ++EA+ + EM
Sbjct: 196 LLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 89 IDPNAYTFNILLDGLCKE------GKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAK 142
P ++ ++ C++ ++L+ M G PN +TY ++M E +A
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 143 DILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQ 183
+ M +SG PD Y +I+ L + ++EA + ++
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVE 355
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 22/158 (13%)
Query: 34 CK-DKLVSDAFDLYSEMLAK------------RI----LPNVFTFNSLIYGFCIVGLLKE 76
CK K SDA+D+ ++L K R+ L + T ++ F G +E
Sbjct: 114 CKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEE 173
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKE-----GKVLAVMMKQGVKPNVVTYNSLMDG 131
A+ + D + ++ N + N+LLD LCKE +V+ + +K + PN T+N + G
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHG 233
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+C V +A + M G P V YT II C+
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ PN ++ I +CK V +A EM P V ++ ++I +C +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
+L EM PN+ T+ ++ L + +V M + G KP+ + YN L+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 133 CLVGEVNKAKDILN-SMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G + +A+ + M + GV+ + Y +I C D+A+ LL
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELL 388
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 34 CKDKLVSDAFDLYSE------------MLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
C D + A DL+ E M +K P F + + + C G LKEA+S++
Sbjct: 297 CLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVI 356
Query: 82 D-EMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQ-GVKPNVVTYNSLMDGYC 133
+ EM+ + P +N+L+ GLC +GK + M KQ N TY +L+DG C
Sbjct: 357 NKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLC 416
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G+ +A ++ M P V+ Y ++I GLC + EA+ L
Sbjct: 417 RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYS-EMLAKRILPNVFTFNSLIYG 67
++L + K P +Y + + C+ + +A + + EM+ LP V +N LI G
Sbjct: 319 EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG 378
Query: 68 FCIVGLLKEAISLLDEMIMK-NIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKP 120
C G EA+ L +M + + N T+ L+DGLC++G+ V+ M+ + P
Sbjct: 379 LCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
V TY+ ++ G C + +A L M + P+ + + +C
Sbjct: 439 GVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
+++++I +F + + DA L+ + + +F++L+ L+ A + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 85 IMK-NIDPNAYTFNILLDGLCK------EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
++ N+L+ LC+ +V M QG P+ +Y LM G+CL G+
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 138 VNKAKDILNSM----AQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ +A +L SM +Q G D+ Y ++++ LC VD+A+ +L
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 2 GQTRASLQLLRKIEGKL-VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G++ ++ L+K+ ++ + N Y T++ C+D +A + EML K P V T
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
++ +I G C + EA+ L+EM+ +++ P + + L + +C
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV---- 112
+ N L+ C V A + EM + P+ ++ IL+ G C EGK+
Sbjct: 151 RITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLL 210
Query: 113 ------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
+ ++G ++V Y L+D C GEV+ A +IL + + G+ +CY I G
Sbjct: 211 YSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG 270
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------ 114
F S+I F G L++AISL + N + +F+ LL + KE ++ A
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 115 -KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
V + N LM C V + A + M G PD Y +++ G C +
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 174 DEALTLLSLQKW 185
+EA LL W
Sbjct: 204 EEATHLLYSMFW 215
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Query: 45 LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
L +E L + +P + +++++ G L E +L M K +P + + + LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 105 KEGKVLAV-------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMA-QSGVTPD 156
+ GK+ MM+ P V YN L+ G C G+ +A L M+ Q +
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 157 VQCYTVIINGLCK 169
+ Y +++GLC+
Sbjct: 405 EETYQTLVDGLCR 417
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 34 CKDKLVSDAFDLYSE------------MLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
C D + A DL+ E M +K P F + + + C G LKEA+S++
Sbjct: 297 CLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVI 356
Query: 82 D-EMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQ-GVKPNVVTYNSLMDGYC 133
+ EM+ + P +N+L+ GLC +GK + M KQ N TY +L+DG C
Sbjct: 357 NKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLC 416
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G+ +A ++ M P V+ Y ++I GLC + EA+ L
Sbjct: 417 RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYS-EMLAKRILPNVFTFNSLIYG 67
++L + K P +Y + + C+ + +A + + EM+ LP V +N LI G
Sbjct: 319 EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKG 378
Query: 68 FCIVGLLKEAISLLDEMIMK-NIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKP 120
C G EA+ L +M + + N T+ L+DGLC++G+ V+ M+ + P
Sbjct: 379 LCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFP 438
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
V TY+ ++ G C + +A L M + P+ + + +C
Sbjct: 439 GVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 25 MYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEM 84
+++++I +F + + DA L+ + + +F++L+ L+ A + +
Sbjct: 83 VFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY 142
Query: 85 IMK-NIDPNAYTFNILLDGLCK------EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
++ N+L+ LC+ +V M QG P+ +Y LM G+CL G+
Sbjct: 143 CYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGK 202
Query: 138 VNKAKDILNSM----AQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ +A +L SM +Q G D+ Y ++++ LC VD+A+ +L
Sbjct: 203 LEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 2 GQTRASLQLLRKIEGKL-VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G++ ++ L+K+ ++ + N Y T++ C+D +A + EML K P V T
Sbjct: 383 GKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVET 442
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
++ +I G C + EA+ L+EM+ +++ P + + L + +C
Sbjct: 443 YHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV---- 112
+ N L+ C V A + EM + P+ ++ IL+ G C EGK+
Sbjct: 151 RITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLL 210
Query: 113 ------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
+ ++G ++V Y L+D C GEV+ A +IL + + G+ +CY I G
Sbjct: 211 YSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAG 270
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------ 114
F S+I F G L++AISL + N + +F+ LL + KE ++ A
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 115 -KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
V + N LM C V + A + M G PD Y +++ G C +
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 174 DEALTLLSLQKW 185
+EA LL W
Sbjct: 204 EEATHLLYSMFW 215
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Query: 45 LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
L +E L + +P + +++++ G L E +L M K +P + + + LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 105 KEGKVLAV-------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMA-QSGVTPD 156
+ GK+ MM+ P V YN L+ G C G+ +A L M+ Q +
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 157 VQCYTVIINGLCK 169
+ Y +++GLC+
Sbjct: 405 EETYQTLVDGLCR 417
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G A+ +L ++ + PN+V Y+ ++ K + +A LY +M P+ T+
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 62 NSL--IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVM 113
+ + + G C G L+EA ++ EM KN P+ + +L+D K G V M
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII----NGLCK 169
+ G++PNV T NSL+ + V ++ +A ++L +M G+ P +Q YT+++ +G K
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Query: 170 IKM 172
+ M
Sbjct: 661 LDM 663
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ V Y T+I K + A D+Y M A + P+ FT++ +I G L A L
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMD--GY 132
EM+ + PN T+NI++D K K+ M G +P+ VTY+ +M+ G+
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
C G + +A+ + M Q PD Y ++++ K V++A
Sbjct: 552 C--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 44/204 (21%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE-- 83
Y+T++G+ + K L EM+ PN T+N LI+ + L EA+++ ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 84 ---------------------------------MIMKNIDPNAYTFNILLDGLCKEG--- 107
M + P+ +T++++++ L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 108 ---KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII 164
K+ M+ QG PN+VTYN +MD + A + M +G PD Y++++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 165 NGLCKIKMVDEA---LTLLSLQKW 185
L ++EA T + + W
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNW 570
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G A+ +L ++ + PN+V Y+ ++ K + +A LY +M P+ T+
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 62 NSL--IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVM 113
+ + + G C G L+EA ++ EM KN P+ + +L+D K G V M
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII----NGLCK 169
+ G++PNV T NSL+ + V ++ +A ++L +M G+ P +Q YT+++ +G K
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Query: 170 IKM 172
+ M
Sbjct: 661 LDM 663
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ V Y T+I K + A D+Y M A + P+ FT++ +I G L A L
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMD--GY 132
EM+ + PN T+NI++D K K+ M G +P+ VTY+ +M+ G+
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
C G + +A+ + M Q PD Y ++++ K V++A
Sbjct: 552 C--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 44/204 (21%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE-- 83
Y+T++G+ + K L EM+ PN T+N LI+ + L EA+++ ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 84 ---------------------------------MIMKNIDPNAYTFNILLDGLCKEG--- 107
M + P+ +T++++++ L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 108 ---KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII 164
K+ M+ QG PN+VTYN +MD + A + M +G PD Y++++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 165 NGLCKIKMVDEA---LTLLSLQKW 185
L ++EA T + + W
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNW 570
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G A+ +L ++ + PN+V Y+ ++ K + +A LY +M P+ T+
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 62 NSL--IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVM 113
+ + + G C G L+EA ++ EM KN P+ + +L+D K G V M
Sbjct: 543 SIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII----NGLCK 169
+ G++PNV T NSL+ + V ++ +A ++L +M G+ P +Q YT+++ +G K
Sbjct: 601 LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Query: 170 IKM 172
+ M
Sbjct: 661 LDM 663
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ V Y T+I K + A D+Y M A + P+ FT++ +I G L A L
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMD--GY 132
EM+ + PN T+NI++D K K+ M G +P+ VTY+ +M+ G+
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
C G + +A+ + M Q PD Y ++++ K V++A
Sbjct: 552 C--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 44/204 (21%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE-- 83
Y+T++G+ + K L EM+ PN T+N LI+ + L EA+++ ++
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 84 ---------------------------------MIMKNIDPNAYTFNILLDGLCKEG--- 107
M + P+ +T++++++ L K G
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 108 ---KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII 164
K+ M+ QG PN+VTYN +MD + A + M +G PD Y++++
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 165 NGLCKIKMVDEA---LTLLSLQKW 185
L ++EA T + + W
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNW 570
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L +LRK V + V Y+ +I F ++ A L EM + P+V T+ S+I
Sbjct: 149 ALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMIN 208
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQG--- 117
G+C G + +A L EM + N+ T++ +L+G+CK G ++LA M K+
Sbjct: 209 GYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGG 268
Query: 118 -VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+ PN VTY ++ +C V +A +L+ M G P+ V+I G+
Sbjct: 269 LISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGV 319
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V+ Y+++I +C + DA+ L EM + N T++ ++ G C G ++ A+ L
Sbjct: 198 PDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALEL 257
Query: 81 LDEMIMKN----IDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMD 130
L EM ++ I PNA T+ +++ C++ + VL M +G PN VT L+
Sbjct: 258 LAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQ 317
Query: 131 GYCLVGEVNKA-KDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
G E KA +++ + + G +C++ L ++K +EA + L
Sbjct: 318 GVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRL 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG--KVLAVMMKQ----GVKPNVVT 124
L EA+ +L + N+ + +N+++ +G + +++K+ G+ P+V+T
Sbjct: 143 ANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVIT 202
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
Y S+++GYC G+++ A + M++ + Y+ I+ G+CK ++ AL LL+
Sbjct: 203 YTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLA 259
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P+ + Y +I S+C A ++ +M K + + F +++ GL+ EA
Sbjct: 170 ITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAE 229
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG-----KVLAVMMKQGVKPNVVTYNSLMDGYC 133
SL EM+ K D + +N+ L KE +++ M G+KP+ V+YN LM YC
Sbjct: 230 SLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYC 289
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ G +++AK + + Q P+ + +I LC + D+ LT+
Sbjct: 290 VKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCINGLYDQGLTVF 332
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +++++R +E K V ++ ++TI+GS K+ LV +A L+ EM+ K
Sbjct: 188 GKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGC-----DL 242
Query: 62 NSLIYGFCIVGLLKEAI----SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQG 117
++ +Y ++ KE+ L++EM + P+ ++N L+ C +G MM +
Sbjct: 243 DNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKG-----MMSEA 297
Query: 118 VK-------PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
K PN T+ +L+ C+ G ++ + A PD + + GL K
Sbjct: 298 KKVYEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKN 357
Query: 171 KMVDEA 176
+++A
Sbjct: 358 NRMEDA 363
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 27/153 (17%)
Query: 27 STIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIM 86
ST+I S+ + + A ++ EM V +FN+L+ L + L DE
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEF-- 163
Query: 87 KNIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILN 146
P Y + P+ ++Y L+ YC G+ KA +I+
Sbjct: 164 ----PQRY---------------------NNITPDKISYGMLIKSYCDSGKPEKAMEIMR 198
Query: 147 SMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
M GV + +T I+ L K +VDEA +L
Sbjct: 199 DMEVKGVEVTIIAFTTILGSLYKNGLVDEAESL 231
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 72.4 bits (176), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
+ ++ CK + + ++ M P+VF + ++I G L ++ + DEM
Sbjct: 266 FMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMR 325
Query: 86 MKNIDPNAYTFNILLDGLCKEGKV-----LAVMMK-QGVKPNVVTYNSLMDGYCLVGEVN 139
I P+ + L+ GLCK+G+V L + MK + + + Y L++G+ G+V
Sbjct: 326 RDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVR 385
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
A ++ + SG D+ Y +I GLC + VD+A L +
Sbjct: 386 SACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQV 428
Score = 70.1 bits (170), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ L++L+++ L P+V Y+ +I + + + + ++ EM I P+V +
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
+L+ G C G ++ L EM K I + + +L++G +GKV + ++
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD 396
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII 164
G ++ YN+++ G C V +V+KA + + + PD + + I+
Sbjct: 397 SGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIM 445
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G ASL++ ++ + P+V+ Y T++ CKD V ++L+ EM K+IL + +
Sbjct: 312 GNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIY 371
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAVMMK 115
LI GF G ++ A +L ++++ + +N ++ GLC K K+ V ++
Sbjct: 372 RVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIE 431
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
+ ++P+ T + +M Y ++ ++ ++L + + G
Sbjct: 432 EELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELG 468
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G RA+ QL ++ + P+ + +I ++ + +Y +M P VF +
Sbjct: 172 GHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLY 231
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
N ++ G A+++ ++ + + TF IL+ GLCK G+ +L M +
Sbjct: 232 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
KP+V Y +++ G ++ + + + M + + PDV Y ++ GLCK V+
Sbjct: 292 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 176 ALTLL 180
L
Sbjct: 352 GYELF 356
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 84/203 (41%), Gaps = 40/203 (19%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +L +++GK ++ + +Y +I F D V A +L+ +++ + ++ +
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIY 406
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG------------------- 102
N++I G C V + +A L I + ++P+ T + ++
Sbjct: 407 NAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGE 466
Query: 103 ---------------LC--KEGKVLAV----MMKQGVKPNVVTYNSLMDGYCLVGEVNKA 141
LC +E +A+ ++K +V YN LM+ +G++ K+
Sbjct: 467 LGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKS 526
Query: 142 KDILNSMAQSGVTPDVQCYTVII 164
+ M + G PD Y++ I
Sbjct: 527 LSLFYEMRKLGFEPDSSSYSIAI 549
Score = 47.0 bits (110), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 11/188 (5%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
MG + SL L ++ P+ YS I F + V A + +++ +P++
Sbjct: 520 MGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAA 579
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNID--PNAYTFNILLDGLCKEG------KVLAV 112
+ SL G C +G + +A+ LL + N++ P + + + + +CK KV+
Sbjct: 580 YLSLTKGLCQIGEI-DAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDE 638
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVT--PDVQCYTVIINGLCKI 170
M ++GV N V Y +++ G G + A+++ + + V D+ Y ++ K
Sbjct: 639 MNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKK 698
Query: 171 KMVDEALT 178
K D L+
Sbjct: 699 KTADLVLS 706
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
S ++ +K++ ++PN V ++ CKD LV +A L+ M K +P V + +++
Sbjct: 118 SDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL------------CKEGKVLAVMM 114
FC +++A + +M I PNA+++ +L+ GL C E M+
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSE------ML 228
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
+ G PNV T+ L+D C V V +A+ ++++ Q G
Sbjct: 229 ESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +++L + K +P VV+Y+ ++ +FCK + DA ++ +M I PN F++
Sbjct: 145 GLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSY 204
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK 105
L+ G +L +A++ EM+ PN TF L+D LC+
Sbjct: 205 GVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 91 PNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDI 144
PNA +LDGLCK+G K+ +M +G P VV Y ++++ +C ++ AK I
Sbjct: 132 PNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRI 188
Query: 145 LNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
M +G+ P+ Y V++ GL M+D+A+ S
Sbjct: 189 FRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCS 225
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 40 SDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNIL 99
D+ +++ +M ++PN +++ G C GL++EA+ L M K P + +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 100 LDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
++ CK K+ M G+ PN +Y L+ G ++ A + M +SG
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 154 TPDVQCYTVIINGLCKIKMVDEALTLL 180
+P+V + +++ LC++K V++A + +
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAI 259
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
S ++ +K++ ++PN V ++ CKD LV +A L+ M K +P V + +++
Sbjct: 118 SDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL------------CKEGKVLAVMM 114
FC +++A + +M I PNA+++ +L+ GL C E M+
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSE------ML 228
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
+ G PNV T+ L+D C V V +A+ ++++ Q G
Sbjct: 229 ESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +++L + K +P VV+Y+ ++ +FCK + DA ++ +M I PN F++
Sbjct: 145 GLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSY 204
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK 105
L+ G +L +A++ EM+ PN TF L+D LC+
Sbjct: 205 GVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCR 248
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 91 PNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDI 144
PNA +LDGLCK+G K+ +M +G P VV Y ++++ +C ++ AK I
Sbjct: 132 PNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRI 188
Query: 145 LNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
M +G+ P+ Y V++ GL M+D+A+ S
Sbjct: 189 FRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCS 225
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 40 SDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNIL 99
D+ +++ +M ++PN +++ G C GL++EA+ L M K P + +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 100 LDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGV 153
++ CK K+ M G+ PN +Y L+ G ++ A + M +SG
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 154 TPDVQCYTVIINGLCKIKMVDEALTLL 180
+P+V + +++ LC++K V++A + +
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAI 259
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 93/182 (51%), Gaps = 6/182 (3%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSL 64
R + L++++ V+PN V YST++ + ++ +A +++EM ++ T N +
Sbjct: 277 REARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIM 336
Query: 65 IYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL------DGLCKEGKVLAVMMKQGV 118
I + + ++KEA L + +I+PN ++N +L + + + +M ++ +
Sbjct: 337 IDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDI 396
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
+ NVVTYN+++ Y E KA +++ M G+ P+ Y+ II+ K +D A T
Sbjct: 397 EQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAAT 456
Query: 179 LL 180
L
Sbjct: 457 LF 458
Score = 66.6 bits (161), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 88/170 (51%), Gaps = 6/170 (3%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V Y+ ++ + + K A L+ EM + + P+ +T+++LI F G+ A+S
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 81 LDEMIMKNIDPNAYTFNILLD---GLCKEGKVLAV---MMKQGVKPNVVTYNSLMDGYCL 134
L +M + + ++ L++ LC K +++ + + G+ P++V YNS+++ Y
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+A+ ++ M ++GV P+ Y+ +++ + EAL++ + K
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK 322
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G ++L L+K+E V ++V+YS +I + S A ++S + I P++ +
Sbjct: 204 GMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAY 263
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
NS+I + L +EA L+ EM + PN +++ LL + K V A M +
Sbjct: 264 NSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE 323
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
++ T N ++D Y + V +A + S+ + + P+V Y I+ + ++ E
Sbjct: 324 VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGE 383
Query: 176 ALTLLSLQK 184
A+ L L +
Sbjct: 384 AIHLFRLMQ 392
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 71.2 bits (173), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+L+++ G+ PN + I+ C+ VS+AF + M+ I +V ++ L+ GF
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVV 123
G ++A+ L ++MI PN T+ L+ G G VL+ + +G+ P++V
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
N ++ Y +G +A+ + S+ + + PD + I++ LC
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC 363
Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 13/171 (7%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+PN + ++ K +V+ A +++ + + N F+F+ + FC G + +
Sbjct: 140 VPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDLVG 195
Query: 80 L---LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMD 130
+ L MI + PN F +L C+ G +V+ +M+ G+ +V ++ L+
Sbjct: 196 VKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVS 255
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G+ GE KA D+ N M Q G +P++ YT +I G + MVDEA T+LS
Sbjct: 256 GFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLS 306
Score = 69.7 bits (169), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + ++ L K+ PN+V Y+++I F +V +AF + S++ ++ + P++
Sbjct: 261 GEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLC 320
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK---VLAVMMKQGV 118
N +I+ + +G +EA + + + + P+ YTF +L LC GK V + G
Sbjct: 321 NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGT 380
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
++VT N L + + +G + A +L+ M+ D YTV ++ LC+
Sbjct: 381 DFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCR 431
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 49 MLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
M+ + PN F ++ C G + EA ++ MI I + +++L+ G + G+
Sbjct: 203 MIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGE 262
Query: 109 ------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTV 162
+ M++ G PN+VTY SL+ G+ +G V++A +L+ + G+ PD+ +
Sbjct: 263 PQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNL 322
Query: 163 IINGLCKIKMVDEALTLL-SLQK 184
+I+ ++ +EA + SL+K
Sbjct: 323 MIHTYTRLGRFEEARKVFTSLEK 345
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/217 (18%), Positives = 96/217 (44%), Gaps = 38/217 (17%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G + +L K++ + + P++V+ + +I ++ + +A +++ + ++++P+ +T
Sbjct: 295 LGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYT 354
Query: 61 FNSLIYGFCI--------------------------------VGLLKEAISLLDEMIMKN 88
F S++ C+ +G A+ +L M K+
Sbjct: 355 FASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKD 414
Query: 89 IDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAK 142
+ YT+ + L LC+ G K+ +++K+ + +++++D +G+ N A
Sbjct: 415 FALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAV 474
Query: 143 DILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+ DV YTV I GL + K ++EA +L
Sbjct: 475 HLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSL 511
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
A+L L ++ + P+V+ Y+T+I + + A +++ EM K LPNVFT+NS+I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVK 119
G C+ G +EA LL EM + +PN ++ L+ L K G KV+ M+K+G
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHY 826
Query: 120 PNVVT 124
++V+
Sbjct: 827 VHLVS 831
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 54 ILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK----- 108
I P+V + +LI G+ + G L +A + EM +K PN +T+N ++ GLC G+
Sbjct: 720 IDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREAC 779
Query: 109 -VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
+L M +G PN V Y++L+ G++++A+ ++ M + G
Sbjct: 780 WLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDG------LCKEGKVLAVMMKQGVKPNVVTYNSLMD 130
A++ L+ M IDP+ + L+DG L K ++ M +G PNV TYNS++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G C+ GE +A +L M G P+ Y+ ++ L K + EA
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEA 813
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 109 VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
L M + G+ P+V+ Y +L+DGY + GE++KAK++ M G P+V Y +I GLC
Sbjct: 711 TLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLC 770
Query: 169 KIKMVDEALTLL 180
EA LL
Sbjct: 771 MAGEFREACWLL 782
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 91/174 (52%), Gaps = 10/174 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G ++ ++ +L++++ + P+ S+++ + + + ++ +L ++ +V+
Sbjct: 204 GLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVE 263
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVLAVMM-K 115
+LI + G L A + D M KNI +N L+ GL K+ + L + M K
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDAKNI----VAWNSLVSGLSYACLLKDAEALMIRMEK 319
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+G+KP+ +T+NSL GY +G+ KA D++ M + GV P+V +T I +G K
Sbjct: 320 EGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSK 373
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 37/221 (16%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
M L+L RK+ + N+ +++I+ S+ K V DA L EM + P++ T
Sbjct: 133 MYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVT 192
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------------ 108
+NSL+ G+ GL K+AI++L M + + P+ + + LL + + G
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 109 -------------VLAVMMKQGVKP------------NVVTYNSLMDGYCLVGEVNKAKD 143
++ + +K G P N+V +NSL+ G + A+
Sbjct: 253 RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEA 312
Query: 144 ILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
++ M + G+ PD + + +G + ++AL ++ K
Sbjct: 313 LMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK 353
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G+ +L ++ K++ K V PNVV ++ I K+ +A ++ +M + + PN T
Sbjct: 339 LGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 398
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL-AVMMKQGVK 119
++L+ + LL + + KN+ +AY L+D K G + A+ + G+K
Sbjct: 399 MSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK 458
Query: 120 -PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
++ ++N ++ GY + G + + M ++G+ PD +T +++ +CK
Sbjct: 459 NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS-VCK 508
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N+V +++++ L+ DA L M + I P+ T+NSL G+ +G ++A+ ++
Sbjct: 290 NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVI 349
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLM 129
+M K + PN ++ + G K G KV M ++GV PN T ++L+
Sbjct: 350 GKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 17/180 (9%)
Query: 14 IEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEM-LAKRILPNVFTFNSLIYGFCIVG 72
+E + + V + ++ C + ++ A +L EM L K + N+ TF S+I G C+
Sbjct: 201 VESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKR 259
Query: 73 LLKEAISLL-----DEMIMKNIDPNAYTFNILLDGLCKEGKV-----LAVMMK-QGVKPN 121
E + L+ E +M ++D ++ +L+DG GKV L +MM + ++
Sbjct: 260 WDFEELDLVLKLMEKESVMLDLD----SYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVE 315
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
YN +M+GY G V K ++ + M+ GVTP+ Y V++NGLCK V EA++ L+
Sbjct: 316 SYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLN 375
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 90/172 (52%), Gaps = 8/172 (4%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-ILPNVFTFNSLIYGFCIVGLLK 75
K V N+V + ++IG C + + DL +++ K ++ ++ ++ LI GF G ++
Sbjct: 240 KGVKANIVTFKSMIGC-CVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVE 298
Query: 76 EAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLM 129
EA L+ M K + +Y +N++++G + G V V M +GV PN TY LM
Sbjct: 299 EAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLM 358
Query: 130 DGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
+G C G+V +A LN + + D + Y+ + ++ M+D++L +++
Sbjct: 359 NGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVA 410
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+L+ +E + VM ++ Y +I F V +A L M K++ + +N ++ G+
Sbjct: 268 VLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYS 327
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVV 123
GL+++ I L EM + + PN T+ +L++GLCK GKV M + +
Sbjct: 328 RFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEE 387
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTP 155
Y++L + VG ++K+ +++ M + G P
Sbjct: 388 MYSTLSEECYRVGMIDKSLEVVAEMIRDGFIP 419
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + +L+ + K + +Y+ I+ + + LV +LYSEM ++ + PN T+
Sbjct: 295 GKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTY 354
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
L+ G C G + EA+S L+E+ + + + ++ L + + G +V+A M++
Sbjct: 355 WVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIR 414
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNK--AKDILNSMAQSGVTP 155
G P L D + EVN+ A+ ++ + + G+ P
Sbjct: 415 DGFIPGATICERLADS---LFEVNRKEAQMLITIVVKCGIKP 453
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLA-KRILPNVFT 60
GQ + +L ++ + + P V +Y+ ++ ++ + L+ DAF + +M + + P+VFT
Sbjct: 138 GQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFT 197
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMM 114
+++L+ SL EM + I PN T NI+L G + G KVL+ M+
Sbjct: 198 YSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDML 257
Query: 115 -KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
KP+V T N ++ + +G+++ + G+ P+ + + ++I K +M
Sbjct: 258 VSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMY 317
Query: 174 DEALTLLSLQK-----WTAKT 189
D+ +++ + WT T
Sbjct: 318 DKMSSVMEYMRKLEFPWTTST 338
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 80/205 (39%), Gaps = 44/205 (21%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFD-LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
P+V YST++ + C D D D LY EM + I PN T N ++ G+ VG +
Sbjct: 193 PDVFTYSTLLKA-CVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEK 251
Query: 80 LLDEMIMKN------------------------------------IDPNAYTFNILLDGL 103
+L +M++ I+P TFNIL+
Sbjct: 252 VLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSY 311
Query: 104 CKE------GKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
K+ V+ M K TYN++++ + VG+ + + M G+ D
Sbjct: 312 GKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADT 371
Query: 158 QCYTVIINGLCKIKMVDEALTLLSL 182
+ + +ING + + ++ + L
Sbjct: 372 KTFCCLINGYANAGLFHKVISSVQL 396
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L ++ + + + +Y +++ + + V +A + +M + I P++F F
Sbjct: 187 GHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCF 246
Query: 62 NSLIYGFC-------IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV----- 109
NSL+ C GL+ EA++++ EM I P + ++NILL L + +V
Sbjct: 247 NSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQ 306
Query: 110 -LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLC 168
L M + G P+ +Y ++ L G K I++ M + G P+ + Y +I LC
Sbjct: 307 ILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLC 366
Query: 169 KIKMVDEALTLLSLQKWTA 187
++ V+ AL L K ++
Sbjct: 367 GVERVNFALQLFEKMKRSS 385
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 5 RASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDK-------LVSDAFDLYSEMLAKRILPN 57
+ + ++++ ++ + P++ +++++ C+ LV +A ++ EM + +I P
Sbjct: 225 KEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPT 284
Query: 58 VFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPN--AYTFNI----LLDGLCKEGKVLA 111
++N L+ ++E+ +L++M DP+ +Y F + L K +++
Sbjct: 285 SMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVD 344
Query: 112 VMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
M+++G +P Y L+ C V VN A + M +S V Q Y ++I LCK
Sbjct: 345 EMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCK 402
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 66/112 (58%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ R S L++++ + + P+V +Y+ +I + CK +++ A L+ EM + N+ T+
Sbjct: 411 GRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTY 470
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM 113
N LI G +E++ L D+M+ + I+P+ + L++GLCKE K+ A M
Sbjct: 471 NVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAM 522
Score = 67.0 bits (162), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
YS +I CK V +++ EM + + P+V +N+LI C +++ A L DEM
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMF 459
Query: 86 MKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
++ N T+N+L+ L +EG ++ M+++G++P+ Y SL++G C ++
Sbjct: 460 VEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIE 519
Query: 140 KAKDILNS-MAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
A ++ M + T + + + LC EA LL
Sbjct: 520 AAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLL 561
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI-----YGFCIVGLLKE 76
+ V ++ I SFC+ ++ A+ EM + P+V T+ +LI + C++G
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG---- 231
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMD 130
L + M++K PN TFN+ + L + +L +M K V+P+ +TYN ++
Sbjct: 232 -NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIK 290
Query: 131 GYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS---LQKW 185
G+ L + A+ + +M G P+++ Y +I+ LCK D A T+ +KW
Sbjct: 291 GFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKW 348
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 6/178 (3%)
Query: 11 LRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCI 70
+R++E + P+VV Y+T+I + K + L++ M+ K PN+ TFN I
Sbjct: 200 MREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVN 259
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVLAVMMKQGVKPNVVT 124
+A LL M ++P++ T+N+++ G +V M +G KPN+
Sbjct: 260 RRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKI 319
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
Y +++ C G + A + + P++ +++ GL K +D+A +++ L
Sbjct: 320 YQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMEL 377
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L L + ++ + P+ Y+++ LV +A + +EML P T+ ++I
Sbjct: 534 ALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIA 593
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKP 120
+ +GLL +A+ L + M + PN + L++G + G V +M + GV+
Sbjct: 594 SYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQS 653
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
N + SL+ Y VG + +A+ + + M S PDV +++ + +V EA ++
Sbjct: 654 NHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Query: 181 S 181
+
Sbjct: 714 N 714
Score = 68.9 bits (167), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+V+ Y+ +I ++ K KL A L+ M + P+ T+NSL V L+ EA +L
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLV 135
EM+ P T+ ++ + G + M K GVKPN V Y SL++G+
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
G V +A M + GV + T +I K+ ++EA
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEA 674
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P Y+ +I S+ + L+SDA DLY M + PN + SLI GF G+++EAI
Sbjct: 583 PGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQY 642
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCL 134
M + N L+ K G +V M P+V NS++
Sbjct: 643 FRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCAD 702
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
+G V++A+ I N++ + G T DV + ++ + M+DEA+
Sbjct: 703 LGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAI 744
Score = 63.9 bits (154), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
++T+I + K ++DA +L+SEML + + TFN++I+ G L EA SLL +M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 86 MKNIDPNAYTFNILLDGLCKEGKVLAVM------MKQGVKPNVVTYNSLMDGYCLVGEVN 139
K I P+ T+NILL G + A + K G+ P+ VT+ +++ C V
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ + ++ M ++ + D VI+ +V +A L
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALF 468
Score = 63.2 bits (152), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 57 NVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC------KEGKVL 110
+V +N +I + L ++A+SL M + P+ T+N L L + ++L
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 111 AVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
A M+ G KP TY +++ Y +G ++ A D+ +M ++GV P+ Y +ING +
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 171 KMVDEALTLLSLQK 184
MV+EA+ + +
Sbjct: 634 GMVEEAIQYFRMME 647
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 60 TFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVM 113
TFN+LI + G L +A +L EM+ + + TFN ++ G +L M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
++G+ P+ TYN L+ + G++ A + + + G+ PD + +++ LC+ KMV
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 174 DEALTLLS 181
E +++
Sbjct: 427 AEVEAVIA 434
Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G ++ L +E V PN V+Y ++I F + +V +A + M + N
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIV 657
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD-----GLCKEGKVLAVMMK 115
SLI + VG L+EA + D+M P+ N +L G+ E + + ++
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALR 717
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII 164
+ +V+++ ++M Y +G +++A ++ M +SG+ D + ++
Sbjct: 718 EKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM 766
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G A+L+ RKI + P+ V + ++ C+ K+V++ + +EM I + +
Sbjct: 389 GDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSV 448
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD-----GLCKEGKVLAVMMKQ 116
++ + GL+ +A +L + + + ++ T ++D GL E + + +
Sbjct: 449 PVIMQMYVNEGLVVQAKALFERFQLDCV-LSSTTLAAVIDVYAEKGLWVEAETVFYGKRN 507
Query: 117 --GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
G + +V+ YN ++ Y KA + M G PD Y + L + +VD
Sbjct: 508 MSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVD 567
Query: 175 EALTLLS 181
EA +L+
Sbjct: 568 EAQRILA 574
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ P++ Y+ +I C+ S ++ + +EM K I P +F +I GF E
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYNSLMDGY 132
++ M + T+NI++ LCK K +M ++PN VTY+ L+ G+
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
C +++A ++ M +G PD +CY +I+ LCK + AL L
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALIL 344
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 7/183 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-ILPNVFTFNSLI 65
S+Q R +E + V + ++ + K +A +Y EM I P++ T+N +I
Sbjct: 130 SIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMI 189
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMKQGVK 119
C G + S++ EM K I P A +F +++DG KE KV+ +M + GV
Sbjct: 190 RVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVH 249
Query: 120 PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
V TYN ++ C + +AK +++ + + P+ Y+++I+G C + +DEA+ L
Sbjct: 250 VGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNL 309
Query: 180 LSL 182
+
Sbjct: 310 FEV 312
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)
Query: 13 KIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVG 72
++E K + P + +I F K++ + + M + V T+N +I C
Sbjct: 207 EMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRK 266
Query: 73 LLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYN 126
EA +L+D ++ + PN+ T+++L+ G C E + VM+ G KP+ Y
Sbjct: 267 KSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYF 326
Query: 127 SLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+L+ C G+ A + + P ++NGL VDEA L+++ K
Sbjct: 327 TLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVK 384
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 18/167 (10%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
+++++ ++ K L+ DA L+ EM + NV +++ LI G+ + G KEA+ L EM
Sbjct: 131 WNSVVNAYAKAGLIDDARKLFDEMPER----NVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 86 MKN-----IDPNAYTFNILLD-----GLCKEGK-VLAVMMKQGVKPNVVTYNSLMDGYCL 134
+ + PN +T + +L G ++GK V A + K V+ ++V +L+D Y
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK 246
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
G + +AK + N++ G DV+ Y+ +I L + DE L S
Sbjct: 247 CGSLERAKRVFNAL---GSKKDVKAYSAMICCLAMYGLTDECFQLFS 290
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 52/230 (22%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDL--YSEMLAK-RILPN 57
+G+ + +L+R + V+ + +YS ++ S CK K S FD+ Y E L K R P
Sbjct: 192 IGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHK-DSSCFDVIGYLEDLRKTRFSPG 250
Query: 58 VFTFNSLIYGFCIVGLLKEAISLLDEMIMKNID--------------------------- 90
+ + ++ G KE +S+L++M ++
Sbjct: 251 LRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFD 310
Query: 91 --------PNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVG 136
P+ YT+N+ ++GLCK+ K+++ M K G +PNVVTYN L+ G
Sbjct: 311 ELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAG 370
Query: 137 EVNKAKDILNSMAQSGVTPDVQCYTVIING-------LCKIKMVDEALTL 179
++++AK + M +GV + + ++I+ +C +++EA +
Sbjct: 371 DLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM 420
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ + + +L +++ V P++V Y+ ++ D+ A L+ E+L + P+V+T+
Sbjct: 265 GRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTY 324
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV------MMK 115
N I G C ++ A+ ++ M +PN T+NIL+ L K G + M
Sbjct: 325 NVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMET 384
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
GV N T++ ++ Y V EV A +L V +I+ LC+ ++D+
Sbjct: 385 NGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQ 444
Query: 176 ALTLLS 181
A+ LL+
Sbjct: 445 AVELLA 450
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 7/118 (5%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM------- 113
F +I + G ++EAI + ++ P+AYT N LL L ++ + L ++
Sbjct: 111 FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKA 170
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIK 171
+ GV+ T+ L+D C +GEV+ A +++ M+Q V D + Y+ +++ +CK K
Sbjct: 171 CRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHK 228
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
RK+ V NVVM++T+I F K + +AFDL+ +ML + ILPN T +++ +
Sbjct: 266 RKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSL 325
Query: 72 GLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKP--NVVTYNSLM 129
G L+ S+ MI I+ +A F +D + G + + P NV++++S++
Sbjct: 326 GSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMI 385
Query: 130 DGYCLVGEVNKAKDILNSMAQSGVTPD 156
+ + + G +A D + M V P+
Sbjct: 386 NAFGINGLFEEALDCFHKMKSQNVVPN 412
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 26/186 (13%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSF------CKD-KLVSDAFDLYSEMLAKRILPNV 58
SL+ + + G ++ + M + SF C + ++ FD+ E NV
Sbjct: 326 GSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER-------NV 378
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL-----DGLCKEG-KVLAV 112
+++S+I F I GL +EA+ +M +N+ PN+ TF LL G KEG K
Sbjct: 379 ISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFES 438
Query: 113 MMKQ-GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI- 170
M + GV P Y ++D GE+ +AK +++M V P + +++ C+I
Sbjct: 439 MTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMP---VKPMASAWGALLSA-CRIH 494
Query: 171 KMVDEA 176
K VD A
Sbjct: 495 KEVDLA 500
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ S+++ I+ K +P+ +Y+ +I +F + ++ Y ML + PN+ T+
Sbjct: 304 GRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETY 363
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------K 115
+ L+ G + +A+ + +EM+ + + P L LC G A M+ K
Sbjct: 364 SKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRK 423
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G + + Y L+ G+ ++ + M +SG DV+ Y I++GLC I ++
Sbjct: 424 AGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLEN 483
Query: 176 ALTLL 180
A+ ++
Sbjct: 484 AVLVM 488
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V +V YS I+ + + KL S D+ M+ + + P++ + F V ++ AI
Sbjct: 147 VTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAI 206
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM----MKQGVKP-NVVTYNSLMDGYC 133
L +E + + +FN LL LC+ V A K+G P + +YN ++ G+
Sbjct: 207 ELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWS 266
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+GEV + + +L M +SG PD Y+ +I GL + +++++ +
Sbjct: 267 KLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIF 313
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
S++ R++ + PN+ YS ++ K + VSDA +++ EML++ +LP S +
Sbjct: 344 SMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLK 403
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKP 120
C G A+ + + + + +LL L + GK V M + G
Sbjct: 404 PLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPS 463
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+V Y ++DG C++G + A ++ + G P+ Y+ + + L
Sbjct: 464 DVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKL 510
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V P++ + + SF + V A +L+ E + + + +FN+L+ C + A
Sbjct: 182 VNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAK 241
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGY 132
S+ + NI ++ ++NI++ G K G KVL M++ G P+ ++Y+ L++G
Sbjct: 242 SVFNAK-KGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGL 300
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
G +N + +I +++ G PD Y +I + DE++
Sbjct: 301 GRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESM 345
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 45 LYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC 104
L +M + ++P+ F N +I + + EAI + EM + +PNAYT++ L+ G+C
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVC 269
Query: 105 KEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQ 158
++G+V M +G+ PN Y L+ + +++A +++ M + ++PD+
Sbjct: 270 EKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDML 329
Query: 159 CYTVIINGLCKIKMVDEALTLLSLQKWTAK 188
Y ++ LC+ EAL + +++W +
Sbjct: 330 TYNTVLTELCRGGRGSEALEM--VEEWKKR 357
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
PN YS ++ C+ V Y EM K ++PN + LI + L EA+ +
Sbjct: 256 PNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEV 315
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--MMKQGVKPNVV----TYNSLMD 130
+ +M+ ++ P+ T+N +L LC+ G+ M+++ K + V Y +LMD
Sbjct: 316 VYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + + +L+ +++ ++PN VM +T++ + K L + +L SE+ + N +
Sbjct: 286 GDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPY 345
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLC-----KEGKVLAVMMKQ 116
L+ G G L+EA S+ D+M K + + Y +I++ LC KE K L+ +
Sbjct: 346 CMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSET 405
Query: 117 GV-KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
K ++V N+++ YC GE+ ++ M + V+PD + ++I K E
Sbjct: 406 TYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK-----E 460
Query: 176 ALTLLSLQ 183
L LL+ Q
Sbjct: 461 KLHLLAYQ 468
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L++ + I + NV + ++I+ K+ + L+ +M + P+V T+N+L+
Sbjct: 150 ALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLA 209
Query: 67 GFCIV---GLLKEAISLLDEMIMKNIDPNAYTFNILL-----DGLCKEGKVLAVMMK-QG 117
G CI G K AI L+ E+ I ++ + +L +G +E + MK +G
Sbjct: 210 G-CIKVKNGYPK-AIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEG 267
Query: 118 VKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
PN+ Y+SL++ Y G+ KA +++ M G+ P+ T ++ K + D +
Sbjct: 268 HSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSR 327
Query: 178 TLLS 181
LLS
Sbjct: 328 ELLS 331
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 42/220 (19%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDK------------------------ 37
G+ + ++L +++ + P+VV Y+T++ K K
Sbjct: 180 GKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVM 239
Query: 38 ------------LVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
+A + +M + PN++ ++SL+ + G K+A L+ EM
Sbjct: 240 YGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMK 299
Query: 86 MKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ PN LL K G ++L+ + G N + Y LMDG G++
Sbjct: 300 SIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLE 359
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
+A+ I + M GV D +++I+ LC+ K EA L
Sbjct: 360 EARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 48/205 (23%)
Query: 20 MP--NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF---------------- 61
MP NVV ++ +I F ++ V LYS+M PN +TF
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 62 -------------------NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG 102
NSLI +C G LK+A + D+ K++ ++N ++ G
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV----VSWNSMIAG 296
Query: 103 LCKEG------KVLAVMM-KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTP 155
+ G ++ +MM K G KP+ +TY ++ G V + + N MA+ G+ P
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 156 DVQCYTVIINGLCKIKMVDEALTLL 180
++ Y+ +++ L + ++ EAL L+
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELI 381
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 27 STIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIM 86
+++I +CK + DAF ++ + K +V ++NS+I G+ GL +AI L + M+
Sbjct: 260 NSLISMYCKCGDLKDAFRIFDQFSNK----DVVSWNSMIAGYAQHGLAMQAIELFELMMP 315
Query: 87 KN-IDPNAYTFNILLD-----GLCKEG-KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
K+ P+A T+ +L GL KEG K +M + G+KP + Y+ L+D G +
Sbjct: 316 KSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQ 375
Query: 140 KAKDILNSM 148
+A +++ +M
Sbjct: 376 EALELIENM 384
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
++P+ + Y +I S+C A ++ +M K + F +++ G L+ A
Sbjct: 170 IIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVAD 229
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEG-----KVLAVMMKQGVKPNVVTYNSLMDGYC 133
+L +EM+ K + + +N+ + KE +++ M G+KP+ ++YN LM YC
Sbjct: 230 NLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYC 289
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G +++AK + + + P+ + +I LC ++ ++ +
Sbjct: 290 ERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIF 336
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 15/152 (9%)
Query: 38 LVSDAFD----LYSEMLAK--RILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDP 91
L S FD L+ E+ + +I+P+ ++ LI +C G ++AI ++ +M K ++
Sbjct: 148 LHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEV 207
Query: 92 NAYTFNILLDGLCKEGKVLAV------MMKQGVKPNVVTYN-SLMDGYCLVGEVNKAKDI 144
F +L L K+G++ M+K+G + + YN +M E + K++
Sbjct: 208 TTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPE--RVKEL 265
Query: 145 LNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ M+ G+ PD Y ++ C+ M+DEA
Sbjct: 266 IEEMSSMGLKPDTISYNYLMTAYCERGMLDEA 297
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 15/201 (7%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G +++++R+++GK + + ++TI+ S K + A +L++EM+ K
Sbjct: 188 GTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGC-----EL 242
Query: 62 NSLIYGFCIVGLLKEAI----SLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLA 111
++ Y I+ KE+ L++EM + P+ ++N L+ C+ G KV
Sbjct: 243 DNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYE 302
Query: 112 VMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIK 171
+ PN T+ +L+ C + I PD ++ GL + K
Sbjct: 303 GLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENK 362
Query: 172 MVDEALTLLSLQKWTAKTLFL 192
D+A L+ K FL
Sbjct: 363 KRDDAKGLIRTVKKKFPPSFL 383
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 97/184 (52%), Gaps = 17/184 (9%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
+G R + +L +++ + NVV ++ ++ + + K +S A L+ EM + NV +
Sbjct: 90 LGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVS 142
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM--MKQGV 118
+N++I G+ G + +A+ L DEM +NI ++N ++ L + G++ M ++
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMP 198
Query: 119 KPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALT 178
+ +VV++ +++DG G+V++A+ + + M + + + +I G + +DEA
Sbjct: 199 RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS----WNAMITGYAQNNRIDEADQ 254
Query: 179 LLSL 182
L +
Sbjct: 255 LFQV 258
Score = 60.5 bits (145), Expect = 7e-10, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
L+R I P V +IG CK +++A L+ + L +R +V T+ +I G
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLF-DGLPER---DVVTWTHVITG 86
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGL--CKEGKVLAVMMKQGVKPNVVTY 125
+ +G ++EA L D + + N T+ ++ G K+ + ++ ++ + NVV++
Sbjct: 87 YIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSW 143
Query: 126 NSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS---- 181
N+++DGY G ++KA ++ + M + + + ++ L + +DEA+ L
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVS----WNSMVKALVQRGRIDEAMNLFERMPR 199
Query: 182 --LQKWTA 187
+ WTA
Sbjct: 200 RDVVSWTA 207
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 20 MP--NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEA 77
MP NVV ++T+I + + + A +L+ EM + N+ ++NS++ G + EA
Sbjct: 135 MPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEA 190
Query: 78 ISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKP--NVVTYNSLMDGYCLV 135
++L + M +++ ++ ++DGL K GKV P N++++N+++ GY
Sbjct: 191 MNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQN 246
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+++A + M + D + +I G + + +++A L
Sbjct: 247 NRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLF 287
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 20 MP--NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK-RILPNVFTFNSLIYGFCIVGLLKE 76
MP NV+ ++T+I + ++K +A +++S+ML + PNV T+ S++ + L E
Sbjct: 290 MPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 77 AISLLDEMIMKNI-DPNAYTFNILLDGLCKEGKVLAV--MMKQGV--KPNVVTYNSLMDG 131
+ ++I K++ N + LL+ K G+++A M G+ + +++++NS++
Sbjct: 350 G-QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAV 408
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
Y G +A ++ N M + G P Y ++ +V++ +
Sbjct: 409 YAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGM 454
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ +++L++++E + + P +V ++ +IG + + A DL +M I +VFT+
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDG------LCKEGKVLAVMMK 115
++I G G+ +A+ + +M + + PNA T + + + +V ++ +K
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G +V+ NSL+D Y G++ A+ + +S+ DV + +I G C+ +
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGK 436
Query: 176 ALTLLS 181
A L +
Sbjct: 437 AYELFT 442
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 45/210 (21%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF---------- 61
RK+ + N+ +S +IG++ ++ + L+ M+ +LP+ F F
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 62 -------------------------NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTF 96
NS++ + G L A M +++ +
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV----IAW 250
Query: 97 NILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQ 150
N +L C+ GK ++ M K+G+ P +VT+N L+ GY +G+ + A D++ M
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET 310
Query: 151 SGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G+T DV +T +I+GL M +AL +
Sbjct: 311 FGITADVFTWTAMISGLIHNGMRYQALDMF 340
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 40/209 (19%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAK-RILPNVFTFNSLI 65
+ +L +++ + PN++ ++T+I + K+ +A DL+ M ++ N T+N +I
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII 496
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTF----------------------------- 96
G+ G EA+ L +M PN+ T
Sbjct: 497 AGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLD 556
Query: 97 ------NILLDGLCKEGKV---LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNS 147
N L D K G + + + K +++T+NSL+ GY L G A + N
Sbjct: 557 AIHAVKNALTDTYAKSGDIEYSRTIFLGMETK-DIITWNSLIGGYVLHGSYGPALALFNQ 615
Query: 148 MAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
M G+TP+ + II + VDE
Sbjct: 616 MKTQGITPNRGTLSSIILAHGLMGNVDEG 644
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 11/142 (7%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+V++ ++++ + K + DA ++ + K +V+T+NS+I G+C G +A L
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELF 441
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQG-VKPNVVTYNSLMDGYCL 134
M N+ PN T+N ++ G K G + M K G V+ N T+N ++ GY
Sbjct: 442 TRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Query: 135 VGEVNKAKDILNSMAQSGVTPD 156
G+ ++A ++ M S P+
Sbjct: 502 NGKKDEALELFRKMQFSRFMPN 523
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
L+ RK+ + +V ++++I +C+ A++L++ M + PN+ T+N++I
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 66 YGFCIVGLLKEAISLLDEMIMKN-IDPNAYTFNILLDGLCKEGK------VLAVMMKQGV 118
G+ G EA+ L M + N T+N+++ G + GK + M
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 119 KPNVVTYNSLM 129
PN VT SL+
Sbjct: 521 MPNSVTILSLL 531
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS----LL 81
+S II +++LVSDA L+ M + + PN+ T NSL+ + + L++A++ L
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 82 DEMIMKNIDPNAYTFNIL--LDGLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
M ++D ++ L K+ + ++ +VV + +L+ GY + G+ +
Sbjct: 448 KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTAKTL 190
A + M +SGVTP+ +T +N +V+E LTL KTL
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTL 558
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+LR ++ + + +Y+T+I S K V F+++ +M + N+ TF +LI G
Sbjct: 489 VLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCA 548
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQG--VKPN 121
G + +A + KN+ P+ FN L+ + G VLA M + + P+
Sbjct: 549 RAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPD 608
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
++ +LM C G+V +AK++ + + G+ + YT+ +N K
Sbjct: 609 HISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSK 656
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+L+ + + + + YS+++G+ C K A +LY ++ + ++ P + T N+LI C
Sbjct: 701 ILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALC 760
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILL------DGLCKEGKVLAVMMKQGVKPNVV 123
L +A+ LDE+ + PN T+++L+ D K+L+ GV PN++
Sbjct: 761 EGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+ + ++ K V P+ V +S +I K++ +AF + + ++ I +++SL+ C
Sbjct: 666 IYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACC 725
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQ-------GVKPNV 122
K+A+ L +++ + P T N L+ LC EG L M+ G+KPN
Sbjct: 726 NAKDWKKALELYEKIKSIKLRPTISTMNALITALC-EGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPD-VQCYTVIINGLCK 169
+TY+ LM + + +L+ GV+P+ + C I LCK
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRC--ITSLCK 830
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 56 PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------ 109
P+ T++ L++G C L+EA +LD+M + P+ T+ IL+ G CK ++
Sbjct: 403 PDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALAC 462
Query: 110 LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSG-VTPDVQCYTVIINGLC 168
A M+++G + + L+DG+ + + A L M ++ V P Y ++I+ L
Sbjct: 463 FANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLL 522
Query: 169 KIKMVDEALTLLSLQK 184
KIK +EAL LL + K
Sbjct: 523 KIKKSEEALDLLQMMK 538
Score = 57.0 bits (136), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ + YS ++ CK K + +A + +M A+ P++ T+ LI G C L +A++
Sbjct: 403 PDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALAC 462
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK-------VLAVMMKQGVKPNVVTYNSLMDGYC 133
M+ K D ++ ++L+DG K ++ ++ VKP TY L+D
Sbjct: 463 FANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLL 522
Query: 134 LVGEVNKAKDILNSMAQ 150
+ + +A D+L M +
Sbjct: 523 KIKKSEEALDLLQMMKK 539
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 108 KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
++ M G +P+ +TY+ L+ G C + +A+ +L+ M G PD++ +T++I G
Sbjct: 391 EITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGH 450
Query: 168 CKIKMVDEALTLLS 181
CK +D+AL +
Sbjct: 451 CKNNELDKALACFA 464
Score = 50.1 bits (118), Expect = 9e-07, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 11/178 (6%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+L ++E + P++ ++ +I CK+ + A ++ ML K + + LI GF
Sbjct: 427 VLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFV 486
Query: 70 IVGLLKEAISLLDEMIMK-NIDPNAYTFNILLDGLCK-----EGKVLAVMMKQGVKPNVV 123
I + A L EM+ N+ P T+ +L+D L K E L MMK K N
Sbjct: 487 IHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMK---KQNYP 543
Query: 124 TYNSLMDGYCL-VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
Y DGY G + AK L+ ++ S +P Y +I + + +A LL
Sbjct: 544 AYAEAFDGYLAKFGTLEDAKKFLDVLS-SKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 47.8 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVT 124
VG EA + M +P+ T++ L+ GLCK + VL M QG P++ T
Sbjct: 383 VGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKT 442
Query: 125 YNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+ L+ G+C E++KA +M + G D V+I+G
Sbjct: 443 WTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGF 485
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Query: 2 GQTRASLQLLRKIEGKL-VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
G+ A+ LL +++ P+V YS +I SF + DL S+M + I PN T
Sbjct: 199 GRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTIT 258
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMK-NIDPNAYTFNILLDGLCKEGKV------LAVM 113
+N+LI + + E S L +M+ + + P+++T N L G++
Sbjct: 259 YNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKF 318
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
G++PN+ T+N L+D Y G K ++ M + + + Y V+I+ +
Sbjct: 319 QSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR 374
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
+LLR E PNV +Y +I K K A +L+ EM+ + + N + +L+
Sbjct: 137 FELLR--EQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSA 194
Query: 68 FCIVGLLKEAISLLDEM-IMKNIDPNAYTFNILLDGLC------KEGKVLAVMMKQGVKP 120
+ G A +LL+ M N P+ +T++IL+ K +L+ M +QG++P
Sbjct: 195 YSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRP 254
Query: 121 NVVTYNSLMDGY 132
N +TYN+L+D Y
Sbjct: 255 NTITYNTLIDAY 266
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKR-ILPNVFTFNSLIYGF 68
LL + + + PN + Y+T+I ++ K K+ + +ML + P+ +T NS + F
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 302
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
G ++ + ++ I+PN TFNILLD K G V+ M K +
Sbjct: 303 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 362
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTP 155
VTYN ++D + G++ + + + M + P
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFP 395
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPN--VVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNV 58
G +L+ K+E ++ V ++ ++ +FC ++ + +A ++ E L R P+V
Sbjct: 152 FGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIF-EKLHSRFNPDV 210
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE---GKVLAV--- 112
T N L+ GF G + EM+ + PN+ T+ I +DG CK+ G+ L +
Sbjct: 211 KTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFED 270
Query: 113 MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
M + V +L+ G + KA+ + + +++ G+TPD Y +++ L K
Sbjct: 271 MDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGD 330
Query: 173 VDEALTLL 180
V A+ ++
Sbjct: 331 VSGAIKVM 338
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 77/200 (38%), Gaps = 43/200 (21%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEM------------------------------- 49
PN V Y I FCK + +A L+ +M
Sbjct: 243 PNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQL 302
Query: 50 ---LAKRIL-PNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK 105
++KR L P+ +N+L+ G + AI ++ EM K I+P++ TF+ + G+ K
Sbjct: 303 FDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMK 362
Query: 106 EGKV--------LAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
+ M ++ + P T LM +C GEVN D+ M + G P
Sbjct: 363 SKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHG 422
Query: 158 QCYTVIINGLCKIKMVDEAL 177
++ LC + ++A
Sbjct: 423 HALELLTTALCARRRANDAF 442
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
L RK+ + N +YS I + + + D E+ + P+VF N +++ C
Sbjct: 278 LARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEV---KYEPDVFVGNRILHSLC 334
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVV 123
+ A ++E+ + TF IL+ C EG + L+ +M +G KP+V
Sbjct: 335 RRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVY 394
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+YN+++ G G IL+ M ++G+ + + +++ G CK + +EA
Sbjct: 395 SYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEA 447
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+V + + I+ S C+ A+ E+ + TF LI C G +K A+
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 81 LDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCL 134
L E++ K P+ Y++N +L GL ++G +L M + G+ ++ T+ ++ GYC
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 135 VGEVNKAKDILNSMAQSGV 153
+ +AK I+N M G+
Sbjct: 441 ARQFEEAKRIVNKMFGYGL 459
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 87/182 (47%), Gaps = 15/182 (8%)
Query: 10 LLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFC 69
+++++EG+ + +Y+ +I C +K S AF + EML K+ +P++ + LI C
Sbjct: 726 VVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLC 785
Query: 70 IVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVV 123
A +L +++ ++Y L+ GL GK+ L +M+ G+
Sbjct: 786 RANKAGTAFNLAEQI------DSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNK 839
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQ 183
YN + GYC K +++L M + + V+ Y + +C + ++L+ +SL+
Sbjct: 840 IYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMC---LEPQSLSAISLK 896
Query: 184 KW 185
++
Sbjct: 897 EF 898
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 44 DLYSEMLA--KRILPNV-------FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAY 94
D YS L +RILP ++ +LI C +G + +A+ L+++M + +
Sbjct: 102 DSYSSSLEDLRRILPQTDAGYTRKHSYETLIARLCKLGRIDDALVLINDMAIGEFGLSTC 161
Query: 95 TFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSM 148
F+ +L+ L K+ + V+ +M + +V +YN + +C G+V +A +L M
Sbjct: 162 VFHPILNTLTKKNRIEEAWRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKM 221
Query: 149 --AQSGV-TPDVQCYTVIINGLCKIKMVDEALTLL 180
+ GV +PD + Y ++ G CK V+ A+ +L
Sbjct: 222 EEEEEGVMSPDTRTYDALVLGACKSGRVEAAMAIL 256
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y+T+I ++ K + +A + + ML + I+P TFN++I+ + G L E SL+ M
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK 360
Query: 86 MKNIDPNAYTFNILL------DGLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+ + P+ T+NIL+ + + + G M G+KP+ V+Y +L+ + + V
Sbjct: 361 L-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+A+ ++ M V D + + + +M++++ +
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWF 460
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLA---KRILPNV 58
G + ++ + ++ + N V+Y+++I + K + +A +Y ++L K P+V
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDV 683
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL-----DGLCKEGKVLAVM 113
+T N +I + ++++A ++ D M + + N +TF ++L +G +E +A
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQ 742
Query: 114 MKQ-GVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKM 172
M++ + + ++YNS++ + L G +A + M SG+ PD + + L K+ M
Sbjct: 743 MREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGM 802
Query: 173 VDEAL 177
+A+
Sbjct: 803 SKKAV 807
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 11 LRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCI 70
L K+ + + + Y +I SF K ++ A ++Y EM+ I P+V + LI F
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLD-----GLCKEGKVLAVMMKQGVK----PN 121
G +++A+S ++ M I N+ +N L+ G E + + + Q P+
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPD 682
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSG 152
V T N +++ Y V KA+ I +SM Q G
Sbjct: 683 VYTSNCMINLYSERSMVRKAEAIFDSMKQRG 713
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 59 FTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL-----DGLCKEGKVLAVM 113
+T+N++I + G +KEA M+ + I P TFN ++ +G E L
Sbjct: 299 YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKT 358
Query: 114 MKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
MK P+ TYN L+ + ++ +A M G+ PD Y ++ MV
Sbjct: 359 MKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 174 DEALTLLS 181
+EA L++
Sbjct: 419 EEAEGLIA 426
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 26 YSTIIGSFCKDKLVSDAFDLY--SEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
YS I ++ + +S+A ++ + + KR V +N +I + I ++A L +
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNKR---TVIEYNVMIKAYGISKSCEKACELFES 530
Query: 84 MIMKNIDPNAYTFNILLDGLC-----KEGK-VLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
M+ + P+ T+N L+ L +G+ L M + G + + Y +++ + +G+
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+N A+++ M + + PDV Y V+IN V +A++ + K
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 77/206 (37%), Gaps = 39/206 (18%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P+ Y+ +I K+ + A + EM + P+ ++ +L+Y F I +++EA L
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 81 LDEMIMKNIDPNAYTFNILLD--------------------------------------- 101
+ EM N++ + YT + L
Sbjct: 425 IAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGER 484
Query: 102 GLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYT 161
G E + + + ++ K V+ YN ++ Y + KA ++ SM GVTPD Y
Sbjct: 485 GYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYN 544
Query: 162 VIINGLCKIKMVDEALTLLSLQKWTA 187
++ L M + L + T
Sbjct: 545 TLVQILASADMPHKGRCYLEKMRETG 570
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 74/160 (46%), Gaps = 6/160 (3%)
Query: 23 VVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLD 82
V+ Y+ +I ++ K A +L+ M++ + P+ T+N+L+ + + L+
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 83 EMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVG 136
+M + + ++ K G+ V M++ ++P+VV Y L++ + G
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 137 EVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
V +A + +M ++G+ + Y +I K+ +DEA
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEA 664
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 8 LQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYG 67
LQ + +EG + V Y++++ K+ + +D+ +EM+ + + PN T N+ +
Sbjct: 344 LQKISPLEGCEL--EVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCF 401
Query: 68 FCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPN 121
FC G + EA+ L P A ++N L+ LC VL + +G
Sbjct: 402 FCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLG 461
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
T+++L + C G+ + A++++ + A+ + P II+ LC + V++AL +
Sbjct: 462 GKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINE 521
Query: 182 L 182
L
Sbjct: 522 L 522
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 77/199 (38%), Gaps = 42/199 (21%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
V +S ++ FCK + +A D +L L+ C +EA LLDE
Sbjct: 252 VTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDE 311
Query: 84 M------------------------------IMKNIDP------NAYTFNILLDGLCKEG 107
+ ++ I P + +N ++ L KE
Sbjct: 312 IKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKEN 371
Query: 108 K------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYT 161
+L MM +GV PN T N+ + +C G V++A ++ S ++ G P Y
Sbjct: 372 NLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYN 431
Query: 162 VIINGLCKIKMVDEALTLL 180
+I+ LC + V++A +L
Sbjct: 432 YLIHTLCANESVEQAYDVL 450
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 10/181 (5%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRIL---PNVFTFNSLI 65
+L+ +++ K P +Y +I C+ + S + ++ +L ++ V +N I
Sbjct: 553 KLIIRMQEKGYTPTRSLYRNVIQCVCE--MESGEKNFFTTLLKFQLSLWEHKVQAYNLFI 610
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVM-----MKQGVKP 120
G G K A + D M I P + ++L K K+ + +++ K
Sbjct: 611 EGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKT 670
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
Y ++ G C +++ A L M G+ P ++CY V I LC + DEA+ L+
Sbjct: 671 KKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLV 730
Query: 181 S 181
+
Sbjct: 731 N 731
Score = 46.6 bits (109), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 8/185 (4%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIY 66
+L+L R P + Y+ +I + C ++ V A+D+ + + TF++L
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTN 470
Query: 67 GFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMM------KQGVKP 120
C G A L+ +++ P ++ LC GKV +M K GV
Sbjct: 471 ALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDT 530
Query: 121 NVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL--T 178
+ + SL+ G + + A ++ M + G TP Y +I +C+++ ++ T
Sbjct: 531 SFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTT 590
Query: 179 LLSLQ 183
LL Q
Sbjct: 591 LLKFQ 595
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N+V Y+T + C++ AF L SE+ + + + FTF SL+ G VG +++ +
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 82 DEMIM--------------------KNIDPNAYTFNI-----------LLDGLCKEGKVL 110
+++ +ID + FN ++ G K G +
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 111 AV------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQS-GVTPDVQCYTVI 163
V M+++GVKPN VTY +++ VG V++ NSM + + P ++ Y +
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 164 INGLCKIKMVDEALTLLSLQKWTAKTL 190
++ LC+ ++ +A ++ + A L
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVL 644
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 62.0 bits (149), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 9/185 (4%)
Query: 1 MGQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFT 60
M T + +RK E K+ + I+ F K + ++A +Y + + T
Sbjct: 334 METTLEVVAAMRKAELKVTD---CILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVT 390
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLD------GLCKEGKVLAVMM 114
+ I +C + +A L DEM+ K D ++ ++D L +++A M
Sbjct: 391 YAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMK 450
Query: 115 KQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVD 174
++G KPN+ YNSL+D + ++ +A+ I M ++ V PD YT +I+ + K ++
Sbjct: 451 QRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELE 510
Query: 175 EALTL 179
+ L
Sbjct: 511 RCVEL 515
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 24 VMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDE 83
V Y+ I ++C+ + + A L+ EM+ K V +++++ + L +A+ L+ +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 84 MIMKNIDPNAYTFNILLD------GLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
M + PN + +N L+D L + K+ M + V P+ V+Y S++ Y E
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+ + ++ + D +++ K +DE + LL K
Sbjct: 509 LERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMK 555
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 61.6 bits (148), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 17 KLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
K+ PN+++++ +I + K+ +A D++ EM+ K + P+ + S I VG L++
Sbjct: 282 KMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA--VMMKQGVKPNVVTYNSLMDGYCL 134
A S+ + + + + + + L+D K G V ++ + + +VV +++++ GY L
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 135 VGEVNKAKDILNSMAQSGVTPD 156
G +A + +M + GV P+
Sbjct: 402 HGRAREAISLYRAMERGGVHPN 423
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 75/159 (47%), Gaps = 2/159 (1%)
Query: 23 VVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLD 82
+V ++ I+ ++ ++ +A +++S+M + P+ S++ F + LK+ S+
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 83 EMIMK--NIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNK 140
++ I+P+ + C + ++ + PN++ +N+++ GY G +
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYARE 306
Query: 141 AKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTL 179
A D+ + M V PD T I+ ++ +++A ++
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSM 345
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 61.2 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 87/162 (53%), Gaps = 15/162 (9%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P++++ ++++ + K + DA++++++M+ K + ++NS+I G GL +A++L
Sbjct: 501 PDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALNL 556
Query: 81 LDEMIMKNIDPNAYTFNILL-----DGLCKEGKVLAVMMKQ--GVKPNVVTYNSLMDGYC 133
EM+ PN+ TF +L GL G L MK+ ++P + Y S++D
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLG 616
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G++ +A++ ++++ TPD Y ++ GLC + D+
Sbjct: 617 RAGKLKEAEEFISALP---FTPDHTVYGALL-GLCGLNWRDK 654
Score = 60.8 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 21/167 (12%)
Query: 20 MP-NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
MP NVV ++ ++ + C D DA +L+ EM + NV ++N+L+ G G +++A
Sbjct: 134 MPKNVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDMEKAK 189
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCK-----EGKVLAVMMKQGVKPNVVTYNSLMDGYC 133
+ D M +++ ++N ++ G + E K+L M + NVVT+ S++ GYC
Sbjct: 190 QVFDAMPSRDV----VSWNAMIKGYIENDGMEEAKLLFGDMSE---KNVVTWTSMVYGYC 242
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G+V +A + M + + +T +I+G ++ EAL L
Sbjct: 243 RYGDVREAYRLFCEMPERNIVS----WTAMISGFAWNELYREALMLF 285
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 87/179 (48%), Gaps = 23/179 (12%)
Query: 19 VMP--NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
VMP N+V + ++ + K + +++A+ L+ EM NV ++ ++ C G ++
Sbjct: 102 VMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSED 156
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAVMMKQGVKP--NVVTYNSLMDGYCL 134
A+ L DEM +N+ ++N L+ GL + G + P +VV++N+++ GY
Sbjct: 157 AVELFDEMPERNV----VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIE 212
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL------SLQKWTA 187
+ +AK + M++ V +T ++ G C+ V EA L ++ WTA
Sbjct: 213 NDGMEEAKLLFGDMSEKNVV----TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTA 267
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 61.2 bits (147), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G R ++LL K+E K + P ++ ++ + K + A ++ M+ P V ++
Sbjct: 437 GIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISY 496
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
+L+ L EA + + MI I+PN Y + + L + K +L M
Sbjct: 497 GALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMAS 556
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+G++P+VVT+N+++ G G A + + M V P+ Y ++I L
Sbjct: 557 KGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEAL 608
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 61 FNSLIYGFCIVGLLKEAISLLDEMIMKN------IDPNAYTFNILLD---GLCKEGKVLA 111
F ++I GF LK A++++D + K I PN + +N LL G + K+L
Sbjct: 149 FCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAMRGFGEAEKILK 208
Query: 112 VMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVII 164
M ++G+ PN+VTYN+LM Y GE KA IL+ + G P+ Y+ +
Sbjct: 209 DMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTAL 261
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 45/90 (50%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ PN+ Y+T+ + + L EM +K I P+V TFN++I G GL A
Sbjct: 524 IEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAY 583
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK 108
M +N++PN T+ +L++ L + K
Sbjct: 584 EWFHRMKSENVEPNEITYEMLIEALANDAK 613
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
Y +++ +CK+ L A L ++M I P+ ++NSL+ + G ++ +++ E+
Sbjct: 126 YGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELK 185
Query: 86 MKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQG-VKPNVVTYNSLMDGYCLVGEV 138
+N+ P++YT+N+ + L +V+ M + G V P+ TY+++ Y G
Sbjct: 186 AENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLS 245
Query: 139 NKAKDILNSMAQSGVTPDVQCYTVII 164
KA+ L + D Y +I
Sbjct: 246 QKAEKALQELEMKNTQRDFTAYQFLI 271
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
NVV ++ +I F ++ +A DL+SEM K + PN FT++ ++ ++ +
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVH 416
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKV-LAVMMKQGV-KPNVVTYNSLMDGYCLVGEVN 139
+++ N + ++ LLD K GKV A + G+ ++V +++++ GY GE
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIIN 165
A + + + G+ P+ ++ I+N
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILN 502
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 20 MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAIS 79
+ +V + ++++ ++ K D ++ EM + NV T+ +LI G+ + E ++
Sbjct: 125 LDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMNDEVLT 180
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYC 133
L M + PN++TF L L +EG +V V++K G+ + NSL++ Y
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 134 LVGEVNKAKDILN-SMAQSGVTPDVQCYTVIINGL 167
G V KA+ + + + +S VT + NGL
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 95/187 (50%), Gaps = 10/187 (5%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
+++L R K + V +++II ++ K+K +A DL+ M + P+ T SL+
Sbjct: 357 GNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL 416
Query: 66 YGFCIVGLLKEAISL-LDEMIMKNIDPNAYTFNILLDGLCKEGKVLA---VMMKQGVKPN 121
GL+ + + + ++++K + P+ N L+ + G+++ + + +K
Sbjct: 417 SAS--TGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKRE 474
Query: 122 VVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA----L 177
V+T+N+++ GY G ++A ++ SM +G+ P + ++N +VDEA +
Sbjct: 475 VITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFV 534
Query: 178 TLLSLQK 184
+++S+ K
Sbjct: 535 SMMSVYK 541
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 92/174 (52%), Gaps = 17/174 (9%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
R I KL N V ++T+I + K + ++ A L+ +++ KR +V T+N++I G+
Sbjct: 60 RDIFEKLEARNTVTWNTMISGYVKRREMNQARKLF-DVMPKR---DVVTWNTMISGYVSC 115
Query: 72 G---LLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKV--LAVMMKQGVKPNVVTYN 126
G L+EA L DEM ++ ++++N ++ G K ++ ++ ++ + N V+++
Sbjct: 116 GGIRFLEEARKLFDEMPSRD----SFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWS 171
Query: 127 SLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+++ G+C GEV+ A + M +P ++ GL K + + EA +L
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVL 221
Score = 51.6 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 11 LRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCI 70
+ +I K V+P+V +++ +I + + + ++ ++ EM KR V T+N++I G+
Sbjct: 431 MHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR---EVITWNAMIGGYAF 487
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLD-----GLCKEGKV--LAVMMKQGVKPNVV 123
G EA++L M I P+ TF +L+ GL E K +++M ++P +
Sbjct: 488 HGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQME 547
Query: 124 TYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKI 170
Y+SL++ G+ +A I+ SM PD + +++ C+I
Sbjct: 548 HYSSLVNVTSGQGQFEEAMYIITSMP---FEPDKTVWGALLDA-CRI 590
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
++ + + ++ + K +SDA + + M+ + NV ++N++I GF G +EA+ L
Sbjct: 275 DIPVATALLNMYAKSNHLSDARECFESMVVR----NVVSWNAMIVGFAQNGEGREAMRLF 330
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLV 135
+M+++N+ P+ TF +L K +V A++ K+G + NSL+ Y
Sbjct: 331 GQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRN 390
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS--LQK 184
G +++A +S+ + PD+ +T +I L +E+L + LQK
Sbjct: 391 GNLSEALLCFHSIRE----PDLVSWTSVIGALASHGFAEESLQMFESMLQK 437
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 2/157 (1%)
Query: 26 YSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMI 85
++++I + ++ F ++ +ML + I PN T S++ +G + L I
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI 548
Query: 86 MKNIDPNAYTFNILLDGLCKEG--KVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKD 143
+ +D N + + L+D K G K M Q + N VTY +++ GY G +A
Sbjct: 549 RQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAIS 608
Query: 144 ILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ SM +SG+ PD + +++ ++DE L +
Sbjct: 609 LFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIF 645
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 85/186 (45%), Gaps = 11/186 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G T + + RK+ + + PN V ++I+ + + V L+ + + + NVF
Sbjct: 500 GHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVA 559
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMK 115
++L+ + G +K A ++M + + N+ T+ ++ G + G + M +
Sbjct: 560 SALVDMYSKAGAIKYA----EDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQE 615
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQ-SGVTPDVQCYTVIINGLCKIKMVD 174
G+KP+ +T+ +++ G +++ I M + + P + Y I + L ++ V+
Sbjct: 616 SGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVN 675
Query: 175 EALTLL 180
EA +
Sbjct: 676 EAYEFV 681
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
NV + S ++ + K + A D++S+ + N T+ ++I G+ G+ + AISL
Sbjct: 555 NVFVASALVDMYSKAGAIKYAEDMFSQTKER----NSVTYTTMILGYGQHGMGERAISLF 610
Query: 82 DEMIMKNIDPNAYTFNILLD-----GLCKEGKVLAVMMKQ--GVKPNVVTYNSLMDGYCL 134
M I P+A TF +L GL EG + M++ ++P+ Y + D
Sbjct: 611 LSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGR 670
Query: 135 VGEVNKAKDILNSMAQSG 152
VG VN+A + + + + G
Sbjct: 671 VGRVNEAYEFVKGLGEEG 688
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 51 AKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCK----- 105
A I P+ + LI G+CI L EA L EM + +N++LD +CK
Sbjct: 238 ANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKK 297
Query: 106 --------EGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDV 157
KVL M +GV N T+N L++ C + +A + M + G PD
Sbjct: 298 DPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDA 357
Query: 158 QCYTVIINGLCKIKMVDEA 176
+ Y V+I L + + E
Sbjct: 358 ETYLVLIRSLYQAARIGEG 376
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +L+L ++ + V PNV+ ++ II S ++ V +A D++ +M + I+PN+ ++
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISW 514
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMMK 115
+++ G G +EAI L +M + PNA++ + L C G+ + +
Sbjct: 515 TTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA-CAHLASLHIGRTIHGYII 573
Query: 116 QGVKPN--VVTYNSLMDGYCLVGEVNKAKDILNS 147
+ ++ + V SL+D Y G++NKA+ + S
Sbjct: 574 RNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 77/151 (50%), Gaps = 10/151 (6%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
++V+ ST++ + K + DA ++ + K ++ +N+L+ + GL EA+ L
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEALRLF 464
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKV------LAVMMKQGVKPNVVTYNSLMDGYCLV 135
M ++ + PN T+N+++ L + G+V M G+ PN++++ ++M+G
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQN 524
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIING 166
G +A L M +SG+ P+ TV ++
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSA 555
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 49/213 (23%)
Query: 7 SLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPN--------- 57
+L++ + KL + NV ++ IIG C+ L A + EML I P+
Sbjct: 122 ALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCK 181
Query: 58 --------------------------VFTFNSL--IYGFCIVGLLKEAISLLDEMIMKNI 89
VF +SL +YG C G+L +A + DE+
Sbjct: 182 ACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC--GVLDDASKVFDEI----P 235
Query: 90 DPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKD 143
D NA +N L+ G + GK + + M KQGV+P VT ++ + +G V + K
Sbjct: 236 DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
Query: 144 ILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+G+ D T ++N CK+ +++ A
Sbjct: 296 SHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
+K+ V ++++++T++ ++ + L +A L+ M + + PNV T+N +I
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 72 GLLKEAISLLDEMIMKNIDPNAYTFNILLDGL----CKEGKVLAV--MMKQGVKPNVVT 124
G + EA + +M I PN ++ +++G+ C E +L + M + G++PN +
Sbjct: 490 GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISL 80
P + + + +I + K L++DA L+ +M + NV ++ ++I + + ++A+ L
Sbjct: 94 PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALEL 149
Query: 81 LDEMIMKNIDPNAYTFNILL---DGLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
L M+ N+ PN YT++ +L +G+ + ++K+G++ +V ++L+D + +GE
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
A + + M VT D + II G + D AL L K
Sbjct: 210 PEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMK 252
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 20 MP--NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEA 77
MP N V ++ +I + + + A DL+ +M+A + P FTF+S + + L+
Sbjct: 271 MPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHG 330
Query: 78 ISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA---VMMKQGVKPNVVTYNSLMDGYCL 134
+ MI N+ PNA + L+D K G + A V K + V +N+++
Sbjct: 331 KEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQ 390
Query: 135 VGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEAL 177
G +KA +L+ M + V P+ VI+N +V+E L
Sbjct: 391 HGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGL 433
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 17/171 (9%)
Query: 19 VMPNVVMYSTIIGSFCKD--KLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKE 76
V PN + +C VS A+ L+ ++ P+V +N++I G+ V E
Sbjct: 62 VAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPE----PDVVVWNNMIKGWSKVDCDGE 117
Query: 77 AISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV-------MMKQGVKPNVVTYNSLM 129
+ L M+ + + P+++TF LL+GL ++G LA ++K G+ N+ N+L+
Sbjct: 118 GVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALV 177
Query: 130 DGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
Y L G ++ A+ + + + DV + ++I+G ++K +E++ LL
Sbjct: 178 KMYSLCGLMDMARGVFDRRCKE----DVFSWNLMISGYNRMKEYEESIELL 224
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 85/162 (52%), Gaps = 14/162 (8%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+VV+ ++ + + K K + A ++ EM + N ++ +L+ + G L+EA S+
Sbjct: 144 DVVVGTSFVDFYGKCKDLFSARKVFGEMPER----NAVSWTALVVAYVKSGELEEAKSMF 199
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--MMKQGVKPNVVTYNSLMDGYCLVGEVN 139
D M +N+ ++N L+DGL K G ++ + + K ++++Y S++DGY G++
Sbjct: 200 DLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMV 255
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
A+D+ GV DV+ ++ +I G + +EA + S
Sbjct: 256 SARDLFEE--ARGV--DVRAWSALILGYAQNGQPNEAFKVFS 293
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+V +S +I + ++ ++AF ++SEM AK + P+ F L+ +G E +
Sbjct: 268 DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCF-ELCEKV 326
Query: 82 DEMIMKNID--PNAYTFNILLD--GLCKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
D + + ++ + Y L+D C A + ++ + ++V+Y S+M+G + G
Sbjct: 327 DSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGC 386
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
++A + M G+ PD +TVI+ + ++V+E L L +
Sbjct: 387 GSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMR 433
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
+V+ Y+TII ++ K+K ++ M ++ +N+L+ + +++ S+L
Sbjct: 732 DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSIL 791
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEG------KVLAVMMKQGVKPNVVTYNSLMDGYCLV 135
M P+ YT+NI+++ ++G VL + + G+ P++ +YN+L+ Y +
Sbjct: 792 KRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIG 851
Query: 136 GEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKW 185
G V +A ++ M + PD YT ++ L + DE L + W
Sbjct: 852 GMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL---RRNDEFLEAIKWSLW 898
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 21 PNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRI-LPNVFTFNSLIYGFCIVGLLKEAIS 79
PN V ++ ++ + K KL +L+ +LAKR + +V ++N++I + S
Sbjct: 697 PNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSS 754
Query: 80 LLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGYC 133
+ M + +N LLD K+ + +L M K P+ TYN +++ Y
Sbjct: 755 AIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYG 814
Query: 134 LVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
G +++ D+L + +SG+ PD+ Y +I MV+EA+ L+
Sbjct: 815 EQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLV 861
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
V PNV ++G + K+ V +A +S M I+ ++S+I + + L +A
Sbjct: 241 VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAE 299
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLMDGY 132
++D M + + ++L+ ++GK +L M G PN++ YN+L+ GY
Sbjct: 300 EVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGY 359
Query: 133 CLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+ ++ A+ + + + G+ PD Y +I G + +EA
Sbjct: 360 GKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEA 403
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 15 EGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGL- 73
E K ++P+V ++ ++ + K L LY + I N +N +I C L
Sbjct: 621 EQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVI-NCCARALP 679
Query: 74 LKEAISLLDEMIMKNIDPNAYTFNILLD-----GLCKEGKVLAVMMKQGVKPNVVTYNSL 128
L E +EMI PN TFN+LLD L K+ L ++ K+ +V++YN++
Sbjct: 680 LDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTI 739
Query: 129 MDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQK 184
+ Y + + +M G + ++ Y +++ K K +++ ++L K
Sbjct: 740 IAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK 795
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIV 71
R++ ++ P+V +Y+ +I + + + DA +L+ EM + +V ++NS+I G
Sbjct: 55 REVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR----DVVSWNSMISGCVEC 110
Query: 72 GLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--MMKQGVKPNVVTYNSLM 129
G + A+ L DEM +++ ++ +++G + GKV + Q + +NS++
Sbjct: 111 GDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMV 166
Query: 130 DGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
GY G+V+ A + M V +T +I GL + + EAL L
Sbjct: 167 HGYLQFGKVDDALKLFKQMPGKNVIS----WTTMICGLDQNERSGEALDLF 213
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
NV + + + CK+KLV +A ++ + L + I P+ T+ ++I GFC VG L EA L
Sbjct: 180 NVETMNRGVETLCKEKLVEEAKFVFIK-LKEFIKPDEITYRTMIQGFCDVGDLIEAAKLW 238
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKE------GKVLAVMM-KQGVKPNVVTYNSLMDGYCL 134
+ M+ + D + +++ L K+ KV VM+ K+G + Y ++D C
Sbjct: 239 NLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCK 298
Query: 135 VGEVNKAKDILNSMAQSGV-------------------------------TPDVQCYTVI 163
G ++ A+ + + M + GV PD+ Y +
Sbjct: 299 NGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVENPDISIYHGL 358
Query: 164 INGLCKIKMVDEA 176
I GL KIK EA
Sbjct: 359 IKGLVKIKRASEA 371
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 40 SDAFDLYSEM---LAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTF 96
S DL+ E+ + KR L N TF ++ LK+ ++ M N T
Sbjct: 125 SRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETM 184
Query: 97 NILLDGLCKE-----GKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQS 151
N ++ LCKE K + + +K+ +KP+ +TY +++ G+C VG++ +A + N M
Sbjct: 185 NRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDE 244
Query: 152 GVTPDVQCYTVIINGLCKIKMVDEA 176
G D++ I+ L K DEA
Sbjct: 245 GFDVDIEAGKKIMETLLKKNQFDEA 269
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEML-AKRILPNVFTFNSLIYGFCI 70
K+ ++ N+V ++T++ + D + A +LY ML ++ N F +++++ +
Sbjct: 60 HKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGL 119
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--MMKQGVKPNVVTYNSL 128
VG ++ I + + + +N+ + N ++D K G+++ K+ ++P+ ++N+L
Sbjct: 120 VGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTL 179
Query: 129 MDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGL 167
+ GYC G +++A + + M Q P+V + +I+G
Sbjct: 180 ISGYCKAGLMDEAVTLFHRMPQ----PNVVSWNCLISGF 214
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 85/170 (50%), Gaps = 15/170 (8%)
Query: 19 VMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAI 78
+ NV + + +I + +L+SDA ++ EM + N+ T+ +++ G+ G +AI
Sbjct: 36 ISQNVFIANNVISMYVDFRLLSDAHKVFDEMSER----NIVTWTTMVSGYTSDGKPNKAI 91
Query: 79 SLLDEMIMKNIDP-NAYTFNILLDGLCKEGKV-LAVMM-----KQGVKPNVVTYNSLMDG 131
L M+ + N + ++ +L G + L +++ K+ ++ +VV NS++D
Sbjct: 92 ELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDM 151
Query: 132 YCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS 181
Y G + +A NS + + P + +I+G CK ++DEA+TL
Sbjct: 152 YVKNGRLIEA----NSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFH 197
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 29 IIGSFCKDKLVSDAFDL------YSEMLA--KRILPNV---FT----FNSLIYGFCIVGL 73
++GSF SD F YS L +R+LP + F+ ++ LI C +G
Sbjct: 67 VLGSFN----TSDTFKFLTNTASYSSYLEDLRRVLPQIDGGFSRKNAYDILISRLCKLGR 122
Query: 74 LKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNS 127
+ +A+ ++ +M + T++ +L L ++ K V+ M + V +V YN
Sbjct: 123 IDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNY 182
Query: 128 LMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLL 180
+ +C GE+ A +++ + + G +PD + Y ++ G C+ V+ A+ +L
Sbjct: 183 FLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAIL 235
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 9 QLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGF 68
++L +I+G N Y +I CK + DA + +M R+ T++ ++
Sbjct: 95 RVLPQIDGGFSRKNA--YDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSL 152
Query: 69 CIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNV 122
++EA +++ M K++ + +N L C +G+ V+ + + G P+
Sbjct: 153 TRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDS 212
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCK 169
+Y++L+ G C G+V A IL M + GVT + +I GL +
Sbjct: 213 RSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVE 259
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 58.2 bits (139), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 12 RKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEM-LAKRILPNVFTFNSLIYGFCI 70
R++ ++ P+V+ ++ ++ +F K+ L +A L+ M K ++P+ TF +++
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 71 VGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL-AVMMKQGV-KPNVVTYNSL 128
+ LK+ + ++I I N + LLD K G V A + G+ K N V++++L
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSAL 337
Query: 129 MDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIIN---GLCKIKMVDE 175
+ GYC GE KA +I M + D+ C+ ++ GL +++ E
Sbjct: 338 LGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKE 383
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 15/151 (9%)
Query: 6 ASLQLLRKIEGKLV----MPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
A+++L ++I G+ V NV++ S +I + K + A +YS+M + N+ T+
Sbjct: 376 AAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR----NMITW 431
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILL-----DGLCKEGKVLAVMMKQ 116
N+++ G +EA+S ++M+ K I P+ +F +L G+ EG+ V+M +
Sbjct: 432 NAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK 491
Query: 117 --GVKPNVVTYNSLMDGYCLVGEVNKAKDIL 145
G+KP Y+ ++D G +A+++L
Sbjct: 492 SYGIKPGTEHYSCMIDLLGRAGLFEEAENLL 522
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Query: 6 ASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLI 65
S++ R++ + N V +S ++G +C++ A +++ EM K +++ F +++
Sbjct: 314 GSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVL 369
Query: 66 YGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA---VMMKQGVKPNV 122
+ ++ + + + + N + L+D K G + + V K ++ N+
Sbjct: 370 KACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NM 428
Query: 123 VTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEA 176
+T+N+++ G +A N M + G+ PD + I+ MVDE
Sbjct: 429 ITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 482
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLC-KEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
SL +M+ I+P+ + N L+ G ++L+ M +G PN +YNSL++ + L GE
Sbjct: 234 SLFRQMVDSGIEPDVFALNCLVKGRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSGE 293
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
++ A L M ++G D Y +++ C+ DEA LL +
Sbjct: 294 IDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEM 338
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 57.8 bits (138), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 13 KIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVG 72
+I K+ N V ++ +I S+ + + A +SEM+ I PN+ T S++ ++G
Sbjct: 258 RIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIG 317
Query: 73 LLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLA---VMMKQGVKPNVVTYNSLM 129
L++E S+ + + +DPN + ++ L L E L+ +++ N+V +NSL+
Sbjct: 318 LIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLI 377
Query: 130 DGYCLVGEVNKAKDILNSMAQSGVTPD 156
Y G V +A + M + PD
Sbjct: 378 SLYAHRGMVIQALGLFRQMVTQRIKPD 404
Score = 47.0 bits (110), Expect = 9e-06, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Query: 22 NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLL 81
N+V ++++I + +V A L+ +M+ +RI P+ FT S I GL+ +
Sbjct: 369 NIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIH 428
Query: 82 DEMIMKNIDPNAYTFNILLDGLCKEGKV--LAVMMKQGVKPNVVTYNSLMDGYCLVGEVN 139
+I ++ + + N L+D K G V + + Q +VVT+NS++ G+ G
Sbjct: 429 GHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSV 487
Query: 140 KAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSLQKWTAKTLFL 192
+A + + M S + + + +I I +++ KW L +
Sbjct: 488 EAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG-------KWVHHKLII 533
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 79 SLLDEMIMKNIDPNAYTFNILLDGLC-KEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGE 137
SL +M+ I+P+ + N L+ G ++L+ M +G PN +YNSL++ + L GE
Sbjct: 209 SLFRQMVDSGIEPDVFALNCLVKGRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSGE 268
Query: 138 VNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLSL 182
++ A L M ++G D Y +++ C+ DEA LL +
Sbjct: 269 IDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEM 313
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 16 GKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLK 75
G+ P + ++I ++ + + DA+ L+ E K P T + L+ G +
Sbjct: 697 GESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHR 756
Query: 76 EAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMKQGVKPNVVTYNSLM 129
EA + + KNI+ + +N L+ + + GK + M GV ++ TYN+++
Sbjct: 757 EAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI 816
Query: 130 DGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDEALTLLS-LQK 184
Y +++KA +I ++ +SG+ D + YT +I K + EAL+L S +QK
Sbjct: 817 SVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQK 872
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 6/186 (3%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G+ A L + ++ + ++ + +Y+ ++ S K DL+ EM+ + + PN FT+
Sbjct: 237 GRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTY 296
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEG---KVLAV---MMK 115
++ + G +EA+ EM P T++ ++ K G K + + M
Sbjct: 297 TLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRS 356
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
QG+ P+ T +++ Y KA + M ++ + D +II K+ + +
Sbjct: 357 QGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHD 416
Query: 176 ALTLLS 181
A ++
Sbjct: 417 AQSMFE 422
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 57.4 bits (137), Expect = 6e-09, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G L + +++ V PN+V+Y+ +I S + K A +Y +++ PN T+
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVL--AVMMKQGVK 119
+L+ + +A+++ EM K + +N LL +C + + + A + Q +K
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEAFEIFQDMK 412
Query: 120 ------PNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMV 173
P+ T++SL+ Y G V++A+ L M ++G P + T +I K K V
Sbjct: 413 NCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQV 472
Query: 174 DEAL 177
D+ +
Sbjct: 473 DDVV 476
Score = 53.9 bits (128), Expect = 7e-08, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 41/212 (19%)
Query: 23 VVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLD 82
V++Y+ + F K K + + L+ EML + I P+ TF ++I G+ K A+ +
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 83 EMIMKNIDPNAYTFNILLDGLCKEGKV-LAV----------------------------- 112
+M +P+ T ++D + G V +A+
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 113 -----------MMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYT 161
M GVKPN+V YN L+D +AK I + +G TP+ Y
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 162 VIINGLCKIKMVDEALTLLSLQKWTAKTLFLI 193
++ + + D+AL + K +L +I
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVI 386
Score = 50.8 bits (120), Expect = 5e-07, Method: Composition-based stats.
Identities = 42/207 (20%), Positives = 86/207 (41%), Gaps = 15/207 (7%)
Query: 2 GQTRASLQLLRKIEGKLVMPNVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPNVFTF 61
G + +++ K+ P+ V + +I ++ + V A LY ++ + TF
Sbjct: 224 GVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTF 283
Query: 62 NSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGK------VLAVMMK 115
++LI + + G +++ +EM + PN +N L+D + + + + ++
Sbjct: 284 STLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLIT 343
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
G PN TY +L+ Y + A I M + G++ V Y +++ + VDE
Sbjct: 344 NGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDE 403
Query: 176 ALTLLSLQK---------WTAKTLFLI 193
A + K WT +L +
Sbjct: 404 AFEIFQDMKNCETCDPDSWTFSSLITV 430
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 57.4 bits (137), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 1 MGQTRA-SLQLLRKIEGKLVMP--NVVMYSTIIGSFCKDKLVSDAFDLYSEMLAKRILPN 57
MG ++A +++ R + K+ +P NVV ++ II + + L+ +A L +M+A + +
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFD 314
Query: 58 VFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDPNAYTFNILLDGLCKEGKVLAV--MMK 115
S++ GLL + + + N+ NAY N LLD K G + +
Sbjct: 315 AAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFN 374
Query: 116 QGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMAQSGVTPDVQCYTVIINGLCKIKMVDE 175
K ++V++N+++ G + G +A ++ + M + G+ PD + ++ ++DE
Sbjct: 375 DIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDE 434
Query: 176 AL 177
+
Sbjct: 435 GI 436
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 32 SFCKDKLVSDAFDLYSEMLAKRILPNVFTFNSLIYGFCIVGLLKEAISLLDEMIMKNIDP 91
S C V DA L+ +M + + ++NS++ G G L++A L DEM +++
Sbjct: 163 SRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL-- 216
Query: 92 NAYTFNILLDGL--CKEGKVLAVMMKQGVKPNVVTYNSLMDGYCLVGEVNKAKDILNSMA 149
++N +LDG C+E + ++ + N V++++++ GY G++ A+ + + M
Sbjct: 217 --ISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMP 274
Query: 150 QSGVTPDVQCYTVIINGLCKIKMVDEA 176
+V +T+II G + ++ EA
Sbjct: 275 LPA--KNVVTWTIIIAGYAEKGLLKEA 299