Miyakogusa Predicted Gene

Lj0g3v0324189.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324189.1 tr|H8WVC7|H8WVC7_LOTJA E3 ubiquitin ligase-like
protein (Fragment) OS=Lotus japonicus GN=SINA5 PE=2 ,99.65,0,SEVEN IN
ABSENTIA HOMOLOG,NULL; SEVEN IN ABSENTIA HOMOLOG,Seven-in-absentia
protein, sina; TRAF doma,CUFF.22053.1
         (285 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G58040.1 | Symbols: SINAT2 | seven in absentia of Arabidopsis...   470   e-133
AT2G41980.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...   457   e-129
AT3G61790.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...   402   e-112
AT4G27880.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...   393   e-110
AT5G53360.1 | Symbols:  | TRAF-like superfamily protein | chr5:2...   310   5e-85
AT3G13672.2 | Symbols:  | TRAF-like superfamily protein | chr3:4...   206   2e-53
AT3G13672.1 | Symbols:  | TRAF-like superfamily protein | chr3:4...   205   2e-53
AT5G37870.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...    93   2e-19
AT5G37930.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...    89   3e-18
AT5G37890.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...    89   3e-18
AT1G66620.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...    89   4e-18
AT5G37910.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...    87   2e-17
AT5G62800.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...    85   6e-17
AT1G66660.2 | Symbols:  | Protein with RING/U-box and TRAF-like ...    83   2e-16
AT1G66630.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...    79   4e-15
AT1G66650.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...    78   9e-15
AT1G66610.2 | Symbols:  | TRAF-like superfamily protein | chr1:2...    66   3e-11
AT1G66610.1 | Symbols:  | TRAF-like superfamily protein | chr1:2...    59   4e-09
AT1G66660.1 | Symbols:  | Protein with RING/U-box and TRAF-like ...    50   2e-06

>AT3G58040.1 | Symbols: SINAT2 | seven in absentia of Arabidopsis 2
           | chr3:21489612-21491085 FORWARD LENGTH=308
          Length = 308

 Score =  470 bits (1210), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 219/284 (77%), Positives = 249/284 (87%), Gaps = 1/284 (0%)

Query: 2   SKMEANINSTVTKSRVALDGKIGINSKNDVYDLLKCPVCTNLMYPPIHQCPNGHTLCSNC 61
           +K+E N N+  TK   A  GK GI+S N VY+LL+CPVCTNLMYPPIHQCPNGHTLCSNC
Sbjct: 26  AKVEVN-NNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNC 84

Query: 62  KISMHNCCPTCFCDLGNIRCLALEKVAESLELPCRNQSLGCHDVFPYYTMLKHEQNCRFR 121
           K+ + N CPTC  +LGNIRCLALEKVAESLE+PCR Q+LGCHD+FPYY+ LKHEQ+CRFR
Sbjct: 85  KLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFR 144

Query: 122 PYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEVENAIWMLTVF 181
           PY CPYAGSECSV GDIPTL+VHLK DHKVD+HDGCTFNHRYVKSNPHEVENA WMLTVF
Sbjct: 145 PYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVF 204

Query: 182 NCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRKLIWQGIPRSI 241
           NCF R FCLHFEAF LG APVY+AFLRF+G++NEA KF ++LEVGA+ RKL WQGIPRSI
Sbjct: 205 NCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSI 264

Query: 242 RNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITGHIWKDE 285
           R+SHRKVRD QDGLIIPR+LALYFS GD+Q+LK ++TG IWK+E
Sbjct: 265 RDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIWKEE 308


>AT2G41980.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr2:17523494-17524692 REVERSE LENGTH=305
          Length = 305

 Score =  457 bits (1175), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 214/286 (74%), Positives = 245/286 (85%), Gaps = 6/286 (2%)

Query: 1   MSKMEANINSTVTKSRVALDGKIG-INSKNDVYDLLKCPVCTNLMYPPIHQCPNGHTLCS 59
           M+K+EAN   T + S     G IG  +S N VY+LL+CPVCTNLMYPPIHQCPNGHTLCS
Sbjct: 25  MAKVEANSKPTKSGS-----GSIGKFHSSNGVYELLECPVCTNLMYPPIHQCPNGHTLCS 79

Query: 60  NCKISMHNCCPTCFCDLGNIRCLALEKVAESLELPCRNQSLGCHDVFPYYTMLKHEQNCR 119
           +CK+ + N CPTC  +LGNIRCLALEKVAESLE+PCR Q+LGC D+FPYY+ LKHEQ+CR
Sbjct: 80  SCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCR 139

Query: 120 FRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEVENAIWMLT 179
           FR Y CPYAGSECSV GDIPTL+ HLK DHKVD+HDGCTFNHRYVKSNPHEVENA WMLT
Sbjct: 140 FRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLT 199

Query: 180 VFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRKLIWQGIPR 239
           VFNCF R FCLHFEAF LG APVY+AFLRF+G++NEA KF ++LEVGA+SRKL WQGIPR
Sbjct: 200 VFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPR 259

Query: 240 SIRNSHRKVRDCQDGLIIPRHLALYFSSGDKQQLKFKITGHIWKDE 285
           SIR+SHRKVRD QDGLIIPR+LALYFS  DK++LK ++TG IWK+E
Sbjct: 260 SIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWKEE 305


>AT3G61790.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr3:22871974-22873543 REVERSE LENGTH=326
          Length = 326

 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 180/261 (68%), Positives = 218/261 (83%)

Query: 25  INSKNDVYDLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNCCPTCFCDLGNIRCLAL 84
           + +   V++LL+CPVCTN MYPPIHQC NGHTLCS CK  +HN CPTC  +LG+IRCLAL
Sbjct: 51  LPTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLAL 110

Query: 85  EKVAESLELPCRNQSLGCHDVFPYYTMLKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVH 144
           EKVAESLELPC++ SLGC ++FPYY+ LKHE  C FRPY CPYAGSECSV GDIP L+ H
Sbjct: 111 EKVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAH 170

Query: 145 LKIDHKVDVHDGCTFNHRYVKSNPHEVENAIWMLTVFNCFERYFCLHFEAFLLGKAPVYI 204
           L+ DHKVD+H GCTFNHRYVKSNP EVENA WMLTVF+CF +YFCLHFEAF LG APVY+
Sbjct: 171 LRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYM 230

Query: 205 AFLRFLGEDNEASKFRFTLEVGANSRKLIWQGIPRSIRNSHRKVRDCQDGLIIPRHLALY 264
           AFLRF+G++ EA  + ++LEVG   RKLIW+G PRS+R+SHRKVRD  DGLII R++AL+
Sbjct: 231 AFLRFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALF 290

Query: 265 FSSGDKQQLKFKITGHIWKDE 285
           FS GD+++LK ++TG IWK++
Sbjct: 291 FSGGDRKELKLRVTGRIWKEQ 311


>AT4G27880.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr4:13883623-13884927 FORWARD LENGTH=327
          Length = 327

 Score =  393 bits (1010), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 175/265 (66%), Positives = 214/265 (80%)

Query: 21  GKIGINSKNDVYDLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNCCPTCFCDLGNIR 80
           G         VY+LL+CPVCT  MYPPIHQC NGHTLCS CK+ +HN CPTC  +LG+IR
Sbjct: 48  GPTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIR 107

Query: 81  CLALEKVAESLELPCRNQSLGCHDVFPYYTMLKHEQNCRFRPYKCPYAGSECSVMGDIPT 140
           CLALEKVAESLELPC+  +LGC ++FPYY+ LKHE  C FRPY CPYAGSEC ++GDIP 
Sbjct: 108 CLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPF 167

Query: 141 LLVHLKIDHKVDVHDGCTFNHRYVKSNPHEVENAIWMLTVFNCFERYFCLHFEAFLLGKA 200
           L+ HL+ DHKVD+H G TFNHRYVKSNP EVENA WMLTVF+CF +YFCLHFEAF LG  
Sbjct: 168 LVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMG 227

Query: 201 PVYIAFLRFLGEDNEASKFRFTLEVGANSRKLIWQGIPRSIRNSHRKVRDCQDGLIIPRH 260
           PVY+AFLRF+G++ +A  + ++LEVG + RKL W+G PRSIR+SHRKVRD  DGLII R+
Sbjct: 228 PVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRN 287

Query: 261 LALYFSSGDKQQLKFKITGHIWKDE 285
           +AL+FS GD+++LK ++TG IWK++
Sbjct: 288 MALFFSGGDRKELKLRVTGKIWKEQ 312


>AT5G53360.1 | Symbols:  | TRAF-like superfamily protein |
           chr5:21648485-21649269 FORWARD LENGTH=233
          Length = 233

 Score =  310 bits (795), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 136/204 (66%), Positives = 169/204 (82%)

Query: 82  LALEKVAESLELPCRNQSLGCHDVFPYYTMLKHEQNCRFRPYKCPYAGSECSVMGDIPTL 141
           +ALEKVAESLELPC+  +LGC  +FPYY+ LKHE  C FRPY CPYAGSEC+ +GDI  L
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 142 LVHLKIDHKVDVHDGCTFNHRYVKSNPHEVENAIWMLTVFNCFERYFCLHFEAFLLGKAP 201
           + HL+ DHKVD+H GCTFNHRYVKSNP EVENA WMLTVF CF +YFCLHFEAF LG AP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 202 VYIAFLRFLGEDNEASKFRFTLEVGANSRKLIWQGIPRSIRNSHRKVRDCQDGLIIPRHL 261
           VY+AFLRF+G++++A  + ++LEVG + RK  W+G PRS+R+SHRKVRD  DGLII R++
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 262 ALYFSSGDKQQLKFKITGHIWKDE 285
           AL+FS GDK++LK ++TG IWK++
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQ 218


>AT3G13672.2 | Symbols:  | TRAF-like superfamily protein |
           chr3:4473541-4474343 REVERSE LENGTH=220
          Length = 220

 Score =  206 bits (523), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 95/207 (45%), Positives = 143/207 (69%), Gaps = 10/207 (4%)

Query: 86  KVAESLELPCRNQSLGCHDVFPYYTMLK----HEQNCRFRPYKCPYAGSECSVMGDIPTL 141
           +V E L+ P     +       Y  +L+    H +N + +PY CP++G++C V GDI  L
Sbjct: 13  RVHELLDFPVHTNQISS---AIYEILLQCPNDHIENPKKKPYNCPHSGAKCDVTGDIQRL 69

Query: 142 LVHLKIDHKVDVHDGCTFNHRYVKSNPHEVENAIWMLTVFNCFERYFCLHFEAFLLGKAP 201
           L+HL+ DH V++ DG +F+HRYV  +P  + +A WMLT+ +C  R FCL+FEAF L K P
Sbjct: 70  LLHLRNDHNVEMSDGRSFSHRYVHHDPKHLHHATWMLTLLDCCGRKFCLYFEAFHLRKTP 129

Query: 202 VYIAFLRFLGEDNEASKFRFTLEVGANSRKLIWQGIPRSIRNSHRKVRDCQDGLIIPRHL 261
           +Y+AF++F+G++ EA  F ++L+VG N RKL WQG+PRSIR+SH+ VRD QDGLII R L
Sbjct: 130 MYMAFMQFMGDEEEAMSFSYSLQVGGNGRKLTWQGVPRSIRDSHKTVRDSQDGLIITRKL 189

Query: 262 ALYFSSGDK---QQLKFKITGHIWKDE 285
           AL+FS+ +    ++LK K++G +W+++
Sbjct: 190 ALFFSTDNNTTDKELKLKVSGRVWREQ 216


>AT3G13672.1 | Symbols:  | TRAF-like superfamily protein |
           chr3:4473541-4474343 REVERSE LENGTH=216
          Length = 216

 Score =  205 bits (522), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 89/175 (50%), Positives = 132/175 (75%), Gaps = 3/175 (1%)

Query: 114 HEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTFNHRYVKSNPHEVEN 173
           H +N + +PY CP++G++C V GDI  LL+HL+ DH V++ DG +F+HRYV  +P  + +
Sbjct: 38  HIENPKKKPYNCPHSGAKCDVTGDIQRLLLHLRNDHNVEMSDGRSFSHRYVHHDPKHLHH 97

Query: 174 AIWMLTVFNCFERYFCLHFEAFLLGKAPVYIAFLRFLGEDNEASKFRFTLEVGANSRKLI 233
           A WMLT+ +C  R FCL+FEAF L K P+Y+AF++F+G++ EA  F ++L+VG N RKL 
Sbjct: 98  ATWMLTLLDCCGRKFCLYFEAFHLRKTPMYMAFMQFMGDEEEAMSFSYSLQVGGNGRKLT 157

Query: 234 WQGIPRSIRNSHRKVRDCQDGLIIPRHLALYFSSGDK---QQLKFKITGHIWKDE 285
           WQG+PRSIR+SH+ VRD QDGLII R LAL+FS+ +    ++LK K++G +W+++
Sbjct: 158 WQGVPRSIRDSHKTVRDSQDGLIITRKLALFFSTDNNTTDKELKLKVSGRVWREQ 212


>AT5G37870.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr5:15073764-15074851 REVERSE LENGTH=281
          Length = 281

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 33  DLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNCCPTCFCDLGNIRCLALEKVAESLE 92
           D+L CP+C   +  P+ QC NGH  CS+C   + N CP C   +G+IRC A+E+V ES+ 
Sbjct: 41  DILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVL 100

Query: 93  LPCRNQSLGCHDVFPYYTMLKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKV 151
           +PCR   LGC     Y     HE+ C F P  CP  G  C+  G    L  H  + H  
Sbjct: 101 VPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQG--CNYTGSYKDLYEHYDLTHST 157


>AT5G37930.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr5:15102239-15103651 REVERSE LENGTH=349
          Length = 349

 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 2/121 (1%)

Query: 33  DLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNCCPTCFCDLGNIRCLALEKVAESLE 92
           D+L CP+C   +  PI QC NGH  C+ C   + N CP+C   +G +RC A+EKV E+  
Sbjct: 109 DVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASR 168

Query: 93  LPCRNQSLGCHDVFPYYTMLKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVD 152
           + C N   GC +   Y     HEQ C F P  CP    +C   G    L  H++ +HK D
Sbjct: 169 VSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPIL--DCHYTGYYKDLNNHVRAEHKDD 226

Query: 153 V 153
           +
Sbjct: 227 L 227


>AT5G37890.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr5:15090512-15091822 REVERSE LENGTH=286
          Length = 286

 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 110/249 (44%), Gaps = 19/249 (7%)

Query: 33  DLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNCCPTCFCDLGNIRCLALEKVAESLE 92
           ++L CP+C      PI QC NGH  CS+C   ++N CP C   +G+ RC A+E V ES+ 
Sbjct: 47  EILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLESIL 106

Query: 93  LPCRNQSLGCHDVFPYYTMLKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVD 152
           +PC N  LGC     Y   L HE+ C F    CP    +C+       L  H +I H ++
Sbjct: 107 IPCPNAKLGCKKNVSYGKELTHEKECMFSHCACP--ALDCNYTSSYKDLYTHYRITH-ME 163

Query: 153 VHDGCTFNHRYVKSNPHEVENAIWMLTVFNCFERYFCLHFEAFLLGKAP--VYIAFLRFL 210
           ++   TF      S    +   I + T       +   H  A    + P  VY+      
Sbjct: 164 INQINTFICDIPLSVRMNISKKILIRT------EHLTNHLFAVQCFREPYGVYVTVSCIA 217

Query: 211 GEDNEASKFRFTLEVGANSRKLIWQG--IPRSIRNSHRKVRDCQDGLIIPRHLALYFSSG 268
               E S++ + L    +   +I+Q   + R ++ S +  +  ++ ++IP  L      G
Sbjct: 218 PSSPELSQYSYALSYTVDGHTVIYQSPEVKRVLKLSFQTPQ--ENFMLIPNSLL----RG 271

Query: 269 DKQQLKFKI 277
           D  +++  +
Sbjct: 272 DVLEMRISV 280


>AT1G66620.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr1:24852806-24854044 REVERSE LENGTH=313
          Length = 313

 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 2/117 (1%)

Query: 33  DLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNCCPTCFCDLGNIRCLALEKVAESLE 92
           DLL CP+C + +  PI QC NGH  CS+C   + N CP+C   +GN R   +E+V E++ 
Sbjct: 40  DLLDCPICCHALTSPIFQCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIMERVVEAVM 99

Query: 93  LPCRNQSLGCHDVFPYYTMLKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDH 149
           + C N   GC + F Y   L HE++CRF    CP     C+  G    L  H  ++H
Sbjct: 100 VTCPNVKHGCTEKFSYGKELIHEKDCRFALCYCP--APNCNYSGVYKDLYSHFYVNH 154


>AT5G37910.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr5:15096210-15097318 REVERSE LENGTH=276
          Length = 276

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 59/121 (48%), Gaps = 2/121 (1%)

Query: 33  DLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNCCPTCFCDLGNIRCLALEKVAESLE 92
           D+L CP+C   +  PI QC NGH  C +C   + N CP C   +G+ R  A+E V ES+ 
Sbjct: 34  DILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESIL 93

Query: 93  LPCRNQSLGCHDVFPYYTMLKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHKVD 152
           +PC N   GC   F Y     HE+ C F    CP   S C   G    L  H K+ H  +
Sbjct: 94  IPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCP--SSVCDYTGSYKDLYAHYKLTHSTN 151

Query: 153 V 153
           +
Sbjct: 152 I 152


>AT5G62800.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr5:25218663-25219967 FORWARD LENGTH=348
          Length = 348

 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 90/214 (42%), Gaps = 24/214 (11%)

Query: 33  DLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNCCPTCFCDL--GNIRCLALEKVAES 90
           D+L CPVC   +  P  QC +GH +C+ C   + N CP   CDL  GN RC A+E+V ES
Sbjct: 39  DVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLES 98

Query: 91  LELPCRNQSLGCHDVFPYYTMLKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVHLKIDHK 150
             +PC+N   GC     Y  +  HE+ C +    CP    EC+  G    +  H    H 
Sbjct: 99  AFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCP--NLECNYTGSYNIIYGHFMRRHL 156

Query: 151 VD---VHDGCTFNHRYVKSNPHEVENAIW-----MLTVFNCFERYFCLHFEAFLLGKAPV 202
            +   V     ++   V  N  E  + +W     +L V  CF+             +  V
Sbjct: 157 YNSTIVSSKWGYSTVDVLINIKEKVSVLWESRQKLLFVVQCFKE------------RHGV 204

Query: 203 YIAFLRFLGEDNEASKFRFTLEVGANSRKLIWQG 236
           Y+   R     +E  KF + L    +   + ++ 
Sbjct: 205 YVTVRRIAPPASEFKKFSYRLSYSIDGHNVTYES 238


>AT1G66660.2 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr1:24862056-24863332 REVERSE LENGTH=348
          Length = 348

 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 33  DLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNCCPTCFCDLGNIRCLALEKVAESLE 92
           D+L CP C   +  PI+QC NGH  CS+C   ++  C  C C++G+IRC A+EKV E+  
Sbjct: 102 DVLDCPTCCEPLKRPIYQCSNGHLACSSCCQKLNKKCSFCRCNIGDIRCRAMEKVIEASI 161

Query: 93  LPCRNQSLGCHDVFPYYTMLKHEQNCRFRPYKCPYAGSECSVMGDIPTLLVH 144
           +PC N   GC +   Y     HE+ C+F    CP   S C+ +     L  H
Sbjct: 162 VPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPV--SNCNYVSSYSNLKSH 211


>AT1G66630.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr1:24855479-24856714 REVERSE LENGTH=303
          Length = 303

 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 68/148 (45%), Gaps = 10/148 (6%)

Query: 7   NINSTVTKSRVALDGKIGINSKNDVYDLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMH 66
           N+  T + S VA    +         DLL CP+C + +  PI+QC NGH  CS+C   + 
Sbjct: 25  NVGGTASGSEVARSATL------LELDLLDCPICYHKLGAPIYQCDNGHIACSSCCKKVK 78

Query: 67  NCCPTCFCDLGNIRCLALEKVAESLELPCRNQSLGCHDVFPY--YTMLKHEQNCRFRPYK 124
             CP C   +G  R   LEK+ E++ + C N   GC +  PY   +   HE+ C F    
Sbjct: 79  YKCPYCSLRIGFFRSRILEKIVEAVVVSCPNAKYGCTEKIPYDNESESAHERVCEFTLCY 138

Query: 125 CPYAGSECSVMGDIPTLLVHLKIDHKVD 152
           CP    EC   G    L  H   +HK D
Sbjct: 139 CP--EPECKYTGVYTDLYRHYHAEHKTD 164


>AT1G66650.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr1:24860113-24861821 REVERSE LENGTH=329
          Length = 329

 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 7/155 (4%)

Query: 6   ANINSTVTKSRVALDGKIGINSKNDVYDLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISM 65
            ++  T  K RV+    + + + N    +L+CP C + +  PI QC NGH  C  C I +
Sbjct: 59  GDVLRTCRKRRVSSPKSVTLPNSN----VLECPNCFDPLKKPIFQCNNGHLACFLCCIKL 114

Query: 66  HNCCPTCFCDLGNIRCLALEKVAESLELPCRNQSLGCHDVFPYYTMLK-HEQNCRFRPYK 124
              C  C   +G++RC A+EKV ++  + C N   GC     Y   L+ HE+ C F P  
Sbjct: 115 KKRCSFCKLPIGDVRCRAMEKVIKAGLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCS 174

Query: 125 CPYAGSECSVMGDIPTLLVHLKIDHKVDVHDGCTF 159
           CP    +C+ +G    L+ H +  HKV   D  +F
Sbjct: 175 CPI--KDCNYIGFYKDLINHFRATHKVSPGDINSF 207


>AT1G66610.2 | Symbols:  | TRAF-like superfamily protein |
           chr1:24850221-24851450 REVERSE LENGTH=237
          Length = 237

 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 18  ALDGKIGINSKNDVY---------DLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNC 68
           ++D + G N   DV          DLL CPVC+  +   I QC NGH  CS+C I +   
Sbjct: 133 SIDEENGENGGRDVVVPSGTLSQLDLLDCPVCSKALKISIFQCDNGHVACSSCCIELRYK 192

Query: 69  CPTCFCDLGNIRCLALEKVAESLELPCRN 97
           CP+C   +GN RC+ +EKV +++ +PC+ 
Sbjct: 193 CPSCSLPIGNYRCIIMEKVVKAIIVPCQT 221



 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 37/63 (58%)

Query: 33  DLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNCCPTCFCDLGNIRCLALEKVAESLE 92
           DLL CP+C N +  PI QC  GH  CS+C  ++ N CP C   +GN R   +E+V E+  
Sbjct: 52  DLLDCPICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRSRIMERVVEAFI 111

Query: 93  LPC 95
           + C
Sbjct: 112 VRC 114


>AT1G66610.1 | Symbols:  | TRAF-like superfamily protein |
           chr1:24849716-24851450 REVERSE LENGTH=366
          Length = 366

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 37/63 (58%)

Query: 33  DLLKCPVCTNLMYPPIHQCPNGHTLCSNCKISMHNCCPTCFCDLGNIRCLALEKVAESLE 92
           DLL CP+C N +  PI QC  GH  CS+C  ++ N CP C   +GN R   +E+V E+  
Sbjct: 52  DLLDCPICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRSRIMERVVEAFI 111

Query: 93  LPC 95
           + C
Sbjct: 112 VRC 114


>AT1G66660.1 | Symbols:  | Protein with RING/U-box and TRAF-like
           domains | chr1:24862056-24863028 REVERSE LENGTH=224
          Length = 224

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 74  CDLGNIRCLALEKVAESLELPCRNQSLGCHDVFPYYTMLKHEQNCRFRPYKCPYAGSECS 133
           C++G+IRC A+EKV E+  +PC N   GC +   Y     HE+ C+F    CP   S C+
Sbjct: 19  CNIGDIRCRAMEKVIEASIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPV--SNCN 76

Query: 134 VMGDIPTLLVH 144
            +     L  H
Sbjct: 77  YVSSYSNLKSH 87