Miyakogusa Predicted Gene
- Lj0g3v0323229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0323229.1 Non Chatacterized Hit- tr|I1KTT0|I1KTT0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,78.88,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_3,Pentatricopeptide repeat; DYW_de,CUFF.22002.1
(683 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 900 0.0
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 446 e-125
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 441 e-124
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 440 e-123
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 436 e-122
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 435 e-122
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 428 e-120
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 428 e-120
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 427 e-119
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 421 e-117
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 420 e-117
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 417 e-117
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 417 e-116
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 417 e-116
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 411 e-115
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 409 e-114
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 407 e-113
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-112
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 401 e-112
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 399 e-111
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 399 e-111
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 398 e-111
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 397 e-110
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 397 e-110
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 390 e-108
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 389 e-108
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 389 e-108
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-105
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-105
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 379 e-105
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 377 e-104
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 375 e-104
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 372 e-103
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-100
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 1e-98
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 357 1e-98
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 6e-98
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 353 2e-97
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 1e-96
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 343 3e-94
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 339 4e-93
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 7e-93
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 1e-92
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 334 1e-91
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 1e-90
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 4e-90
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 2e-85
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 4e-85
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 9e-85
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 310 2e-84
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 7e-83
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 6e-82
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 1e-81
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 6e-81
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 2e-79
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 289 5e-78
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 288 8e-78
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 1e-76
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 6e-76
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 4e-74
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 9e-74
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 2e-73
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 8e-73
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 7e-71
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 265 7e-71
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 1e-70
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 263 3e-70
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 7e-70
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 8e-70
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 1e-69
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 3e-69
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 4e-69
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 257 2e-68
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 256 3e-68
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 4e-68
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 6e-68
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 2e-67
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 5e-67
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 2e-66
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 248 1e-65
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 247 2e-65
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 247 2e-65
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 2e-63
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 1e-60
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 226 4e-59
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 6e-59
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 9e-59
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 225 1e-58
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 2e-57
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 2e-57
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 220 2e-57
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 7e-57
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 8e-57
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 214 2e-55
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 8e-55
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 1e-53
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 1e-53
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 207 2e-53
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 3e-53
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 9e-53
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 6e-48
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 5e-45
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 6e-44
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 172 7e-43
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 7e-42
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 4e-39
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 6e-29
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 2e-26
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 116 5e-26
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 5e-25
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 6e-25
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 103 3e-22
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 103 6e-22
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 8e-22
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 9e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 5e-20
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 96 1e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 94 4e-19
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 6e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 87 4e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 87 4e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 1e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 86 1e-16
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 85 1e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 84 3e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 83 5e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 5e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 83 6e-16
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 76 8e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 75 1e-13
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 75 2e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 6e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 3e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 62 2e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 60 3e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 60 6e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 58 2e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 58 3e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 56 8e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 53 6e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/705 (62%), Positives = 547/705 (77%), Gaps = 26/705 (3%)
Query: 1 MEIPLSSYQTLSLDQFQDRSC----------FTSNMRNWSYPFPRIRCSSSMEQGLRPKP 50
MEIPLS YQ++ LD+ +D S F+ R W PF R+ CSS + QGL+PKP
Sbjct: 1 MEIPLSRYQSIRLDEIRDSSSNPKVLTFPRKFSLRGRRWKNPFGRLSCSSVV-QGLKPKP 59
Query: 51 K------KTEYVDRKMPVLDDAQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGD 104
K + E + K +LDD QI K S +CSQIEKL LCNR REA ELFEILE+
Sbjct: 60 KLKPEPIRIEVKESKDQILDDTQISK-SGVTICSQIEKLVLCNRFREAFELFEILEIR-- 116
Query: 105 CA-DVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD 163
C+ VG STYDALV C+ L+SIR VK+V+ +M+S+GFEP+ YMMNR+LLMHVKCG+++D
Sbjct: 117 CSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIID 176
Query: 164 ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAG 223
AR+LF ++PER++ S+ ++I G V+ G+Y EAF LF MW E +D + TFA M+RASAG
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAG 236
Query: 224 LGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSI 283
LG I VG+Q+H CALK+GV ++FV+C LIDMYSKCG IEDA+CAF+ MPEKTTV WN++
Sbjct: 237 LGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNV 296
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
IAGYALHGYSEEAL + +MRDSG ID FT+SI+IRI +LA LE KQAHA+L+R+GF
Sbjct: 297 IAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF 356
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQ 403
S+IVANTALVDFYSKWGR++ AR+VFD++ RKN+ISWNAL+ GY NHG+G A+++FE+
Sbjct: 357 ESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEK 416
Query: 404 MLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 463
M+ V PNHVTFLAVLSAC+YSGLSE+GWEIF SMS H +KPRAMHYACMIELLGR+G
Sbjct: 417 MIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDG 476
Query: 464 LLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLN 523
LLDEA A IRRAP + T NMW ALL ACRM NLELG+ AEKLY M P KL NYV++ N
Sbjct: 477 LLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYN 536
Query: 524 IYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDK----SHTQTKEIYQ 579
+YNS GK EAAGVL+TL+ KGL M+P CTW+EV Q H+FL GD+ + T ++IYQ
Sbjct: 537 MYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQ 596
Query: 580 KVDEILDEISRHGYIKENEMLLPDVDE-EEQRLQQYHSEKLAIAFGLINTPDWTPLQITQ 638
KVDE+++EIS +GY +E + LLPDVDE EE+R+ +YHSEKLAIA+GL+NTP+W PLQITQ
Sbjct: 597 KVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQ 656
Query: 639 GHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
HR+C +CH ++ I++VTGRE+VVRDASRFHHF+ CSCG YW
Sbjct: 657 NHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 347/579 (59%), Gaps = 4/579 (0%)
Query: 100 ELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCG 159
+LEG Y+ L+ C + + + V +++ S F D+ M N +L M+ KCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 160 LMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR-TFATMV 218
+ +ARK+F MP+RD V+W T+I G +A LF + F + T ++++
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL-LFFNQMLRFGYSPNEFTLSSVI 168
Query: 219 RASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTV 278
+A+A G Q+H +K G + V AL+D+Y++ G ++DAQ FD + + V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 279 GWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAAL 338
WN++IAG+A +E+AL ++ M G + HF+ + + C LE K HA +
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 339 VRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAI 398
++ G A L+D Y+K G + DAR +FDR+ +++V+SWN+L+ Y HG G++A+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 399 QMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIEL 458
FE+M R + PN ++FL+VL+ACS+SGL + GW + M +D + P A HY +++L
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDL 407
Query: 459 LGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNY 518
LGR G L+ A I P EPT +W ALL ACRMH N ELG +AAE ++E+DP +
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467
Query: 519 VMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIY 578
V+L NIY S G+ +AA V + +K G++ P C+W+E++ H F+ D+ H Q +EI
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527
Query: 579 QKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIAFGLINTPDWTPLQIT 637
+K +E+L +I GY+ + ++ VD++E+ + QYHSEK+A+AF L+NTP + + I
Sbjct: 528 RKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIK 587
Query: 638 QGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNAT 676
+ RVCGDCH AIKL + V GREI+VRD +RFHHF++A+
Sbjct: 588 KNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/610 (37%), Positives = 353/610 (57%), Gaps = 7/610 (1%)
Query: 76 LCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNY 135
L + EK GL + E++ LF L++ T+ ++ VGL +++
Sbjct: 221 LITGYEKDGL---YTESIHLF--LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHAL 275
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
+++GF D + N++L + K +L+ R LF +MPE D VS+ VI + Y +
Sbjct: 276 SVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEAS 335
Query: 196 FGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDM 255
F M D R+ FATM+ +A L +Q+GRQ+H AL V +L+DM
Sbjct: 336 LHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDM 395
Query: 256 YSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTI 315
Y+KC E+A+ F +P++TTV W ++I+GY G L ++ +MR S + D T
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455
Query: 316 SIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHR 375
+ V++ ASL KQ HA ++R G ++ + + LVD Y+K G ++DA VF+ M
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD 515
Query: 376 KNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
+N +SWNALI+ + ++G GE AI F +M+ + P+ V+ L VL+ACS+ G E+G E
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY 575
Query: 436 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHG 495
F +MS + + P+ HYACM++LLGR G EA L+ PFEP + MW ++L ACR+H
Sbjct: 576 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHK 635
Query: 496 NLELGKFAAEKLYEMDPGK-LCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTW 554
N L + AAEKL+ M+ + YV + NIY ++G+ ++ V + ++ +G++ +P +W
Sbjct: 636 NQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSW 695
Query: 555 IEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQ-RLQQ 613
+EV + H F D++H EI +K++E+ EI R GY + ++ DVDE+ + +
Sbjct: 696 VEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLK 755
Query: 614 YHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFR 673
YHSE+LA+AF LI+TP+ P+ + + R C DCH AIKLI+ + REI VRD SRFHHF
Sbjct: 756 YHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFS 815
Query: 674 NATCSCGDYW 683
CSCGDYW
Sbjct: 816 EGVCSCGDYW 825
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 199/417 (47%), Gaps = 6/417 (1%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA +LF + C T+ L+ C V +V + + GF+ + ++
Sbjct: 128 EAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS 187
Query: 151 VLLMHVKCGLM-LD-ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
+L+ C + LD A LF ++PE+D V++ T+I G G Y+E+ LFL M +
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
TF+ +++A GL +G+Q+H+ ++ G D+ V ++D YSK + + +
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
FD+MPE V +N +I+ Y+ E +L + EM+ G +F + ++ I L+SL
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSL 367
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
+ +Q H + S + +LVD Y+K E+A +F + ++ +SW ALI+GY
Sbjct: 368 QMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGY 427
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 448
G +++F +M + + TF VL A + G ++ + R ++
Sbjct: 428 VQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-N 486
Query: 449 AMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE--LGKFA 503
+ ++++ + G + +A + P + W AL++A +G+ E +G FA
Sbjct: 487 VFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFA 542
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 142/289 (49%), Gaps = 20/289 (6%)
Query: 126 IRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGG 185
+ +KV++ M + N ++ HVK G + AR LF MP+R VV+W ++G
Sbjct: 64 VSAARKVYDEMP----HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGW 119
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSR--------TFATMVRASAGLGLIQVGRQIHSCA 237
+ + EAF LF M RS TF T++ Q+H+ A
Sbjct: 120 YARNSHFDEAFKLFRQMC------RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFA 173
Query: 238 LKMGVGGDSF--VACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEE 295
+K+G + F V+ L+ Y + ++ A F+++PEK +V +N++I GY G E
Sbjct: 174 VKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTE 233
Query: 296 ALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVD 355
++ ++L+MR SG + FT S V++ V L +Q HA V GF D ++D
Sbjct: 234 SIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILD 293
Query: 356 FYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
FYSK R+ + R +FD M + +S+N +I+ Y Q E ++ F +M
Sbjct: 294 FYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
+ V+ ++ + K G + AR +FD M + V++W L+ Y + ++A ++F QM
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 406 RER--VIPNHVTFLAVLSACS 424
R +P+HVTF +L C+
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCN 158
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/630 (35%), Positives = 361/630 (57%), Gaps = 39/630 (6%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A+ F + G C D + + +++ C + +R + V +++ G + DLY N
Sbjct: 88 KALASFVEMRASGRCPD--HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145
Query: 151 VLLMHVK---------CGLMLD---------------------------ARKLFGDMPER 174
++ M+ K G + D R++F MP +
Sbjct: 146 LMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRK 205
Query: 175 DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIH 234
DVVS+ T+I G SG Y +A + M S T ++++ + + G++IH
Sbjct: 206 DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIH 265
Query: 235 SCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSE 294
++ G+ D ++ +L+DMY+K IED++ F ++ + + WNS++AGY +G
Sbjct: 266 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYN 325
Query: 295 EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALV 354
EAL ++ +M + K S VI C LA+L KQ H ++R GFGS+I +ALV
Sbjct: 326 EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALV 385
Query: 355 DFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHV 414
D YSK G ++ AR +FDRM+ + +SW A+I G+ HG G +A+ +FE+M R+ V PN V
Sbjct: 386 DMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 445
Query: 415 TFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
F+AVL+ACS+ GL + W F SM++ + + HYA + +LLGR G L+EA+ I +
Sbjct: 446 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISK 505
Query: 475 APFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEA 534
EPT ++W LL++C +H NLEL + AEK++ +D + YV++ N+Y S+G+ KE
Sbjct: 506 MCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEM 565
Query: 535 AGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYI 594
A + +++KGLR P C+WIE+K + H F+ GD+SH +I + + +++++ + GY+
Sbjct: 566 AKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYV 625
Query: 595 KENEMLLPDVDEEEQRLQQY-HSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLI 653
+ +L DVDEE +R + HSE+LA+AFG+INT T +++T+ R+C DCH AIK I
Sbjct: 626 ADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFI 685
Query: 654 AMVTGREIVVRDASRFHHFRNATCSCGDYW 683
+ +T REI+VRD SRFHHF CSCGDYW
Sbjct: 686 SKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 205/446 (45%), Gaps = 73/446 (16%)
Query: 168 FGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
F + V++W +VI D +S+A F+ M F +++++ + +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKC---GSIEDAQCAFDQMPEKTT------- 277
+ G +H +++G+ D + AL++MY+K GS FD+MP++T+
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 278 --------------------------VGWNSIIAGYALHGYSEEALSIYLEMRDSGAKID 311
V +N+IIAGYA G E+AL + EM + K D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 312 HFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
FT+S V+ I + K+ H ++R G SD+ ++LVD Y+K R+ED+ VF
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 431
R++ ++ ISWN+L+AGY +G+ +A+++F QM+ +V P V F +V+ AC++
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 432 GWEI------------FYSMSRDHKVKPRAMHYACMIELLGREGLLDEA----------- 468
G ++ + S + + + ++ R +LDE
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 469 ----------FALIRRAPFEPTKNMWVALLTACRMHGNLE--LGKF-AAEKLYEMDPGKL 515
F ++R +P + +VA+LTAC G ++ G F + K+Y ++ +L
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ-EL 480
Query: 516 CNYVMLLNIYNSSGKLKEAAGVLQTL 541
+Y + ++ +GKL+EA + +
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKM 506
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 36/208 (17%)
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
A +I +Y+ + +A F + + W S+I + +AL+ ++EMR SG
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101
Query: 309 KIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRM----- 363
DH V++ C + L + H +VR G D+ AL++ Y+K M
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 364 -------------------------------EDARHVFDRMHRKNVISWNALIAGYGNHG 392
+ R VF+ M RK+V+S+N +IAGY G
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 393 QGEQAIQMFEQMLRERVIPNHVTFLAVL 420
E A++M +M + P+ T +VL
Sbjct: 222 MYEDALRMVREMGTTDLKPDSFTLSSVL 249
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 88 RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
R+ EA+ LF ++ GA + +++ C L ++ K++ Y++ GF ++++
Sbjct: 323 RYNEALRLFR--QMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
+ ++ M+ KCG + ARK+F M D VSW +I G G EA LF M +
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 208 DGRSRTFATMVRASAGLGLIQVGRQIHSCALKM-GVGGDSFVACALIDMYSKCGSIEDAQ 266
F ++ A + +GL+ + K+ G+ + A+ D+ + G +E+A
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Query: 267 CAFDQM-PEKTTVGWNSIIAGYALH 290
+M E T W+++++ ++H
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVH 525
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/562 (38%), Positives = 342/562 (60%)
Query: 122 GLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMT 181
LR I K++ Y + SGF+ + + ++ M+ KCG + AR+LF M ER+VVSW +
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 182 VIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMG 241
+I V + + EA +F M E + + A A LG ++ GR IH ++++G
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 242 VGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYL 301
+ + V +LI MY KC ++ A F ++ +T V WN++I G+A +G +AL+ +
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
+MR K D FT VI L+ HAK H ++R ++ TALVD Y+K G
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 362 RMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS 421
+ AR +FD M ++V +WNA+I GYG HG G+ A+++FE+M + + PN VTFL+V+S
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 422 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTK 481
ACS+SGL E G + FY M ++ ++ HY M++LLGR G L+EA+ I + P +P
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 482 NMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
N++ A+L AC++H N+ + AAE+L+E++P +V+L NIY ++ ++ V ++
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSM 667
Query: 542 KRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLL 601
R+GLR P C+ +E+K + H+F G +H +K+IY +++++ I GY+ + ++L
Sbjct: 668 LRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL 727
Query: 602 PDVDEEEQRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREI 661
++ +++L HSEKLAI+FGL+NT T + + + RVC DCHNA K I++VTGREI
Sbjct: 728 GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREI 787
Query: 662 VVRDASRFHHFRNATCSCGDYW 683
VVRD RFHHF+N CSCGDYW
Sbjct: 788 VVRDMQRFHHFKNGACSCGDYW 809
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 200/408 (49%), Gaps = 13/408 (3%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
+ L+ VC +R K++ ++ SGF DL+ M + M+ KC + +ARK+F M
Sbjct: 137 NFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRM 196
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
PERD+VSW T++ G +G A + M E T +++ A + L LI VG+
Sbjct: 197 PERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGK 256
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
+IH A++ G ++ AL+DMY+KCGS+E A+ FD M E+ V WNS+I Y +
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
+EA+ I+ +M D G K ++ + C L LE + H V G ++
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
+L+ Y K ++ A +F ++ + ++SWNA+I G+ +G+ A+ F QM V P
Sbjct: 377 SLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP 436
Query: 412 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 471
+ T+++V++A + ++ I + R K + A ++++ + G + +
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA-LVDMYAKCGAI-----M 490
Query: 472 IRRAPF----EPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKL 515
I R F E W A++ HG GK A E EM G +
Sbjct: 491 IARLIFDMMSERHVTTWNAMIDGYGTHG---FGKAALELFEEMQKGTI 535
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 163/308 (52%)
Query: 125 SIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIG 184
S++ ++++ + +G + + +++ + + G + +A ++F + + V + T++
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 185 GLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGG 244
G D +A F+ M + + F +++ ++VG++IH +K G
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 245 DSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR 304
D F L +MY+KC + +A+ FD+MPE+ V WN+I+AGY+ +G + AL + M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 305 DSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRME 364
+ K TI V+ L + K+ H +R GF S + +TALVD Y+K G +E
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 365 DARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS 424
AR +FD M +NV+SWN++I Y + ++A+ +F++ML E V P V+ + L AC+
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 425 YSGLSERG 432
G ERG
Sbjct: 349 DLGDLERG 356
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 113/205 (55%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
RQI K G+ + F L+ ++ + GS+++A F+ + K V +++++ G+A
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
++AL ++ MR + + + ++++C A L K+ H LV+ GF D+ A
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 351 TALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI 410
T L + Y+K ++ +AR VFDRM ++++SWN ++AGY +G A++M + M E +
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 411 PNHVTFLAVLSACSYSGLSERGWEI 435
P+ +T ++VL A S L G EI
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEI 258
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY +++ L K + ++ S + ++++ ++ M+ KCG ++ AR +F M
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVG- 230
ER V +W +I G G A LF M TF +++ A + GL++ G
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559
Query: 231 ------RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG-WNSI 283
++ +S L M G A++D+ + G + +A QMP K V + ++
Sbjct: 560 KCFYMMKENYSIELSMDHYG------AMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 284 IAGYALH---GYSEEALSIYLEMR-DSGAKIDHFTISIVIRICVRLASL-EHAKQAHAAL 338
+ +H ++E+A E+ D G +++ R AS+ E Q ++
Sbjct: 614 LGACQIHKNVNFAEKAAERLFELNPDDGG------YHVLLANIYRAASMWEKVGQVRVSM 667
Query: 339 VRHGF 343
+R G
Sbjct: 668 LRQGL 672
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/608 (36%), Positives = 362/608 (59%), Gaps = 22/608 (3%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
N ++A+ ++ ++L D + T+ L+ C GL ++ + V + GF+ D++
Sbjct: 98 NHFQDALLMYSNMQLARVSPD--SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 147 MMNRVLLMHVKCGLMLDARKLFG--DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFM-- 202
+ N ++ ++ KC + AR +F +PER +VSW ++ +G+ EA +F M
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 203 ------WVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMY 256
WV +++ A L ++ GR IH+ +KMG+ + + +L MY
Sbjct: 216 MDVKPDWV--------ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 257 SKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTIS 316
+KCG + A+ FD+M + WN++I+GYA +GY+ EA+ ++ EM + + D +I+
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
I C ++ SLE A+ + + R + D+ ++AL+D ++K G +E AR VFDR +
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 436
+V+ W+A+I GYG HG+ +AI ++ M R V PN VTFL +L AC++SG+ GW F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 437 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGN 496
M+ DHK+ P+ HYAC+I+LLGR G LD+A+ +I+ P +P +W ALL+AC+ H +
Sbjct: 448 NRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 497 LELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIE 556
+ELG++AA++L+ +DP +YV L N+Y ++ A V +K KGL C+W+E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 557 VKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDV-DEEEQRLQQYH 615
V+ + AF GDKSH + +EI ++V+ I + G++ + L D+ DEE + H
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 616 SEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNA 675
SE++AIA+GLI+TP TPL+IT+ R C +CH A KLI+ + REIVVRD +RFHHF++
Sbjct: 627 SERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDG 686
Query: 676 TCSCGDYW 683
CSCGDYW
Sbjct: 687 VCSCGDYW 694
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 217/450 (48%), Gaps = 38/450 (8%)
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVD 188
+K++ ++ G + +++ +++ G + AR++F D+P + W +I G
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV 248
+ + +A ++ M + S TF +++A +GL +Q+GR +H+ ++G D FV
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 249 ACALIDMYSKCGSIEDAQCAFD--QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDS 306
LI +Y+KC + A+ F+ +PE+T V W +I++ YA +G EAL I+ +MR
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 307 GAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDA 366
K D + V+ L L+ + HA++V+ G + +L Y+K G++ A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 367 RHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYS 426
+ +FD+M N+I WNA+I+GY +G +AI MF +M+ + V P+ ++ + +SAC+
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 427 GLSERGWEIFYSMSR------------------------------DHKVKPRAMHYACMI 456
G E+ ++ + R D + + ++ MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 457 ELLGREGLLDEAFALIR---RAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL--YEMD 511
G G EA +L R R P ++ LL AC G + G + ++ ++++
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKIN 456
Query: 512 PGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
P + +Y ++++ +G L +A V++ +
Sbjct: 457 PQQQ-HYACVIDLLGRAGHLDQAYEVIKCM 485
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/661 (33%), Positives = 371/661 (56%), Gaps = 40/661 (6%)
Query: 63 LDDAQIMKPSTPGLCSQIEKLGLCNRHREAMELF-------EILELEGDCADVGASTYDA 115
D + P+ +E+L NR EA+++ E ++L G ASTY
Sbjct: 31 FSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCN 90
Query: 116 LVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERD 175
L+ VC R++ KKV ++ +SGF P + + NR+L M+ KCG ++DARK+F +MP RD
Sbjct: 91 LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRD 150
Query: 176 VVSWMTVIGGLVDSGDYSEAFGLF-------LFMWVEFNDGRSR---------------- 212
+ SW ++ G + G EA LF + W G +
Sbjct: 151 LCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR 210
Query: 213 ---------TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIE 263
T + V A+A + I+ G++IH ++ G+ D + +L+DMY KCG I+
Sbjct: 211 VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCID 270
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
+A+ FD++ EK V W S+I Y E S++ E+ S + + +T + V+ C
Sbjct: 271 EARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACA 330
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
L + E KQ H + R GF A+++LVD Y+K G +E A+HV D + +++SW +
Sbjct: 331 DLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTS 390
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
LI G +GQ ++A++ F+ +L+ P+HVTF+ VLSAC+++GL E+G E FYS++ H
Sbjct: 391 LIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKH 450
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
++ + HY C+++LL R G ++ ++I P +P+K +W ++L C +GN++L + A
Sbjct: 451 RLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEA 510
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHA 563
A++L++++P YV + NIY ++GK +E + + ++ G+ P +W E+K++ H
Sbjct: 511 AQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHV 570
Query: 564 FLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDV-DEEEQRLQQYHSEKLAIA 622
F+ D SH +I + + E+ ++ GY+ ++L DV DE+++ YHSEKLA+A
Sbjct: 571 FIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVA 630
Query: 623 FGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDY 682
F +++T + T +++ + R C DCH AIK I+ +T R+I VRD++RFH F N CSCGDY
Sbjct: 631 FAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDY 690
Query: 683 W 683
W
Sbjct: 691 W 691
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/593 (36%), Positives = 353/593 (59%), Gaps = 8/593 (1%)
Query: 92 AMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRV 151
AM+ + L+ G AD ++TY L+ C+ R++ + ++ +G P ++++N +
Sbjct: 45 AMKAMDSLQSHGLWAD--SATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVL 102
Query: 152 LLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRS 211
+ M+VK L+ DA +LF MP+R+V+SW T+I + +A L + M +
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNV 162
Query: 212 RTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQ 271
T+++++R+ G+ + R +H +K G+ D FV ALID+++K G EDA FD+
Sbjct: 163 YTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 272 MPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA 331
M + WNSII G+A + S+ AL ++ M+ +G + T++ V+R C LA LE
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 332 KQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNH 391
QAH +V+ + D++ N ALVD Y K G +EDA VF++M ++VI+W+ +I+G +
Sbjct: 280 MQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 392 GQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMH 451
G ++A+++FE+M PN++T + VL ACS++GL E GW F SM + + + P H
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH 397
Query: 452 YACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMD 511
Y CMI+LLG+ G LD+A L+ EP W LL ACR+ N+ L ++AA+K+ +D
Sbjct: 398 YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALD 457
Query: 512 PGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSH 571
P Y +L NIY +S K + ++ +G++ P C+WIEV KQ HAF+ GD SH
Sbjct: 458 PEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSH 517
Query: 572 TQTKEIYQKVDEILDEISRHGYIKENEMLLPDVD-EEEQRLQQYHSEKLAIAFGLINTPD 630
Q E+ +K+++++ ++ GY+ E +L D++ E+ + ++HSEKLA+AFGL+ P
Sbjct: 518 PQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPI 577
Query: 631 WTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
++I + R+CGDCH KL + + R IV+RD R+HHF++ CSCGDYW
Sbjct: 578 EKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/594 (37%), Positives = 347/594 (58%), Gaps = 5/594 (0%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
E++++F L + C + +T ++ L+ +R ++ + +G Y++
Sbjct: 203 ESIQVFRDL-INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
+ ++ KCG + LF + + D+V++ +I G +G+ + LF + + R
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
S T ++V S L LI IH LK + V+ AL +YSK IE A+ FD
Sbjct: 322 SSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD 378
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEH 330
+ PEK+ WN++I+GY +G +E+A+S++ EM+ S + TI+ ++ C +L +L
Sbjct: 379 ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSL 438
Query: 331 AKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGN 390
K H + F S I +TAL+ Y+K G + +AR +FD M +KN ++WN +I+GYG
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL 498
Query: 391 HGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 450
HGQG++A+ +F +ML + P VTFL VL ACS++GL + G EIF SM + +P
Sbjct: 499 HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 451 HYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM 510
HYACM+++LGR G L A I EP ++W LL ACR+H + L + +EKL+E+
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL 618
Query: 511 DPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKS 570
DP + +V+L NI+++ +AA V QT K++ L P T IE+ + PH F GD+S
Sbjct: 619 DPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQS 678
Query: 571 HTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIAFGLINTP 629
H Q KEIY+K++++ ++ GY E E+ L DV+EEE+ L + HSE+LAIAFGLI T
Sbjct: 679 HPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATE 738
Query: 630 DWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
T ++I + RVC DCH KLI+ +T R IVVRDA+RFHHF++ CSCGDYW
Sbjct: 739 PGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 197/407 (48%), Gaps = 17/407 (4%)
Query: 109 GASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLF 168
+STY ++ G R R + + + G + +L + + ++ M+ K + DARK+F
Sbjct: 118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 177
Query: 169 GDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR----TFATMVRASAGL 224
MPE+D + W T+I G + Y E+ +F + N+ +R T ++ A A L
Sbjct: 178 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL---INESCTRLDTTTLLDILPAVAEL 234
Query: 225 GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSII 284
+++G QIHS A K G +V I +YSKCG I+ F + + V +N++I
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 285 AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFG 344
GY +G +E +LS++ E+ SGA++ T+ ++ + L + H ++ F
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFL 351
Query: 345 SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
S +TAL YSK +E AR +FD K++ SWNA+I+GY +G E AI +F +M
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 405 LRERVIPNHVTFLAVLSACSYSG-LSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 463
+ PN VT +LSAC+ G LS W + + R + +I + + G
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKW--VHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 464 LLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM 510
+ EA L + + W +++ +HG G+ A YEM
Sbjct: 470 SIAEARRLFDLMT-KKNEVTWNTMISGYGLHGQ---GQEALNIFYEM 512
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 206/459 (44%), Gaps = 43/459 (9%)
Query: 125 SIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIG 184
SI + + +I GF D+ ++ ++ G + AR +F + DV + ++
Sbjct: 32 SISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 185 GLVDSGDYSEAFGLFLFMWVEFN-DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVG 243
G + + +F + + S T+A + A++G + GR IH A+ G
Sbjct: 92 GFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCD 151
Query: 244 GDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM 303
+ + ++ MY K +EDA+ FD+MPEK T+ WN++I+GY + E++ ++ ++
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 304 -RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
+S ++D T+ ++ L L Q H+ + G S T + YSK G+
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML----RER------VIP- 411
++ +F + +++++NA+I GY ++G+ E ++ +F++++ R R ++P
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV 331
Query: 412 -----------------NHVTFLAVLSACS--YSGLS--ERGWEIFYSMSRDHKVKPRAM 450
N ++ +V +A + YS L+ E ++F D +
Sbjct: 332 SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF-----DESPEKSLP 386
Query: 451 HYACMIELLGREGLLDEAFALIR---RAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
+ MI + GL ++A +L R ++ F P +L+AC G L LGK+ + +
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 508 YEMD-PGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
D + L+ +Y G + EA + + +K
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
R S+ H Q HA ++ HGF +DI T L S G + AR +F + R +V +N
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVI-PNHVTFLAVLSACS 424
L+ G+ + ++ +F + + + PN T+ +SA S
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/589 (37%), Positives = 339/589 (57%), Gaps = 10/589 (1%)
Query: 100 ELEGDCADVGASTY----DALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMH 155
++ G +G +Y L+ + + I KKVF Y + + + M N ++
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF-YGLD---DRNTVMYNSLMGGL 215
Query: 156 VKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFA 215
+ CG++ DA +LF M E+D VSW +I GL +G EA F M V+ F
Sbjct: 216 LACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 216 TMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK 275
+++ A GLG I G+QIH+C ++ +V ALIDMY KC + A+ FD+M +K
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 276 TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAH 335
V W +++ GY G +EEA+ I+L+M+ SG DH+T+ I C ++SLE Q H
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 336 AALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGE 395
+ G + + +LV Y K G ++D+ +F+ M+ ++ +SW A+++ Y G+
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAV 454
Query: 396 QAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 455
+ IQ+F++M++ + P+ VT V+SACS +GL E+G F M+ ++ + P HY+CM
Sbjct: 455 ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCM 514
Query: 456 IELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKL 515
I+L R G L+EA I PF P W LL+ACR GNLE+GK+AAE L E+DP
Sbjct: 515 IDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHP 574
Query: 516 CNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTK 575
Y +L +IY S GK A + + ++ K ++ P +WI+ K + H+F D+S
Sbjct: 575 AGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLD 634
Query: 576 EIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQ-RLQQYHSEKLAIAFGLINTPDWTPL 634
+IY K++E+ ++I +GY + + DV+E + ++ YHSE+LAIAFGLI P P+
Sbjct: 635 QIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPI 694
Query: 635 QITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
++ + RVC DCHNA K I+ VTGREI+VRDA RFH F++ TCSCGD+W
Sbjct: 695 RVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 200/419 (47%), Gaps = 47/419 (11%)
Query: 113 YDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
Y+ +V+ ++S ++VF+ + +P+L+ N +LL + K GL+ + F +P
Sbjct: 44 YNNIVHAYALMKSSTYARRVFDRIP----QPNLFSWNNLLLAYSKAGLISEMESTFEKLP 99
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR-TFATMVRASAGLGLIQVGR 231
+RD V+W +I G SG A + M +F+ +R T TM++ S+ G + +G+
Sbjct: 100 DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGK 159
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSK-------------------------------CG 260
QIH +K+G V L+ MY+ CG
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
IEDA F M EK +V W ++I G A +G ++EA+ + EM+ G K+D + V+
Sbjct: 220 MIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
C L ++ KQ HA ++R F I +AL+D Y K + A+ VFDRM +KNV+S
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 338
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 440
W A++ GYG G+ E+A+++F M R + P+H T +SAC+ E G S
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG-----SQF 393
Query: 441 RDHKVKPRAMHYAC----MIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHG 495
+ +HY ++ L G+ G +D++ L + W A+++A G
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-WTAMVSAYAQFG 451
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP 143
G R EA+++F L+++ D T ++ C + S+ + I+SG
Sbjct: 347 GQTGRAEEAVKIF--LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH 404
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
+ + N ++ ++ KCG + D+ +LF +M RD VSW ++ G E LF M
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 204 VEFNDGRSRTFATMVRASAGLGLIQVG-RQIHSCALKMGVGGDSFVACALIDMYSKCGSI 262
T ++ A + GL++ G R + G+ +ID++S+ G +
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 263 EDAQCAFDQMP-EKTTVGWNSIIA 285
E+A + MP +GW ++++
Sbjct: 525 EEAMRFINGMPFPPDAIGWTTLLS 548
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/639 (34%), Positives = 343/639 (53%), Gaps = 71/639 (11%)
Query: 116 LVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERD 175
L VC L + + K++ SG + D ++ + M+++CG M DARK+F M ++D
Sbjct: 122 LFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKD 181
Query: 176 VV-----------------------------------SWMTVIGGLVDSGDYSEAFGLFL 200
VV SW ++ G SG + EA +F
Sbjct: 182 VVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQ 241
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG 260
+ T ++++ + ++ +GR IH +K G+ D V A+IDMY K G
Sbjct: 242 KIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSG 301
Query: 261 SIEDAQCAFDQMP-----------------------------------EKTTVGWNSIIA 285
+ F+Q E V W SIIA
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 286 GYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGS 345
G A +G EAL ++ EM+ +G K +H TI ++ C +A+L H + H VR
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
++ +AL+D Y+K GR+ ++ VF+ M KN++ WN+L+ G+ HG+ ++ + +FE ++
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
R R+ P+ ++F ++LSAC GL++ GW+ F MS ++ +KPR HY+CM+ LLGR G L
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKL 541
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIY 525
EA+ LI+ PFEP +W ALL +CR+ N++L + AAEKL+ ++P YV+L NIY
Sbjct: 542 QEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIY 601
Query: 526 NSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEIL 585
+ G E + ++ GL+ P C+WI+VK + + L GDKSH Q +I +K+DEI
Sbjct: 602 AAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEIS 661
Query: 586 DEISRHGYIKENEMLLPDVDEEEQRLQQY-HSEKLAIAFGLINTPDWTPLQITQGHRVCG 644
E+ + G+ + L DV+E+EQ + HSEKLA+ FGL+NTPD TPLQ+ + R+CG
Sbjct: 662 KEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICG 721
Query: 645 DCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
DCH IK I+ GREI +RD +RFHHF++ CSCGD+W
Sbjct: 722 DCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/453 (22%), Positives = 194/453 (42%), Gaps = 48/453 (10%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
++ SG + D Y+ +++ + DA + +P+ + S+ ++I L + ++++
Sbjct: 41 ILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQS 100
Query: 196 FGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDM 255
G+F M+ S + + A L +VG+QIH + G+ D+FV ++ M
Sbjct: 101 IGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHM 160
Query: 256 YSKCGSIEDAQCAFDQMPEK-----------------------------------TTVGW 280
Y +CG + DA+ FD+M +K V W
Sbjct: 161 YMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSW 220
Query: 281 NSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR 340
N I++G+ GY +EA+ ++ ++ G D T+S V+ L + H +++
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 341 HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQM 400
G D +A++D Y K G + +F++ NA I G +G ++A++M
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 401 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 460
FE + + N V++ ++++ C+ +G E+F M + VKP + M+ G
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPNHVTIPSMLPACG 399
Query: 461 R-----EGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGK- 514
G FA+ R ++ AL+ G + L + ++ M P K
Sbjct: 400 NIAALGHGRSTHGFAV--RVHLLDNVHVGSALIDMYAKCGRINLSQI----VFNMMPTKN 453
Query: 515 LCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
L + L+N ++ GK KE + ++L R L+
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%)
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
Q H+ LK G D +++ LI YS DA +P+ T ++S+I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
+++ ++ M G D + + ++C L++ + KQ H G D
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
++ Y + GRM DAR VFDRM K+V++ +AL+ Y G E+ +++ +M +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 412 NHVTFLAVLSACSYSGLSERGWEIF 436
N V++ +LS + SG + +F
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMF 240
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/604 (37%), Positives = 351/604 (58%), Gaps = 14/604 (2%)
Query: 90 REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMN 149
REA+ F + L G +D T ++ + C L ++ K++ ++ I SG D+
Sbjct: 251 REAIRFFLDMVLSGFESD--KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC-- 306
Query: 150 RVLLMHVKC---GLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDY-SEAFGLFLFMWVE 205
++ M+ KC G + D RK+F M + V+SW +I G + + + +EA LF M +
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 206 FN-DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED 264
+ + TF++ +A L +VG+Q+ A K G+ +S VA ++I M+ K +ED
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 265 AQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
AQ AF+ + EK V +N+ + G + E+A + E+ + + FT + ++
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNAL 384
+ S+ +Q H+ +V+ G + AL+ YSK G ++ A VF+ M +NVISW ++
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 385 IAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 444
I G+ HG + ++ F QM+ E V PN VT++A+LSACS+ GL GW F SM DHK
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606
Query: 445 VKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAA 504
+KP+ HYACM++LL R GLL +AF I PF+ +W L ACR+H N ELGK AA
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAA 666
Query: 505 EKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAF 564
K+ E+DP + Y+ L NIY +GK +E+ + + +K + L C+WIEV + H F
Sbjct: 667 RKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKF 726
Query: 565 LCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDV-----DEEEQRLQQYHSEKL 619
GD +H +IY ++D ++ EI R GY+ + +++L + + E++RL HSEK+
Sbjct: 727 YVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKI 786
Query: 620 AIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSC 679
A+AFGLI+T P+++ + RVCGDCHNA+K I+ V+GREIV+RD +RFHHF++ CSC
Sbjct: 787 AVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSC 846
Query: 680 GDYW 683
DYW
Sbjct: 847 NDYW 850
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 162/325 (49%), Gaps = 18/325 (5%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ +L+ C+ R R K V +I EPD + N ++ ++ K G A +F M
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 172 ---PERDVVSWMTVIGGLVDSG---DYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLG 225
+RDVVSW ++ ++G D + F FL + + ND + ++RA +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPND---YCYTAVIRACSNSD 180
Query: 226 LIQVGRQIHSCALKMG-VGGDSFVACALIDMYSKC-GSIEDAQCAFDQMPEKTTVGWNSI 283
+ VGR +K G D V C+LIDM+ K S E+A FD+M E V W +
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I G+ EA+ +L+M SG + D FT+S V C L +L KQ H+ +R G
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 344 GSDIVANTALVDFYSKW---GRMEDARHVFDRMHRKNVISWNALIAGY-GNHGQGEQAIQ 399
D+ +LVD Y+K G ++D R VFDRM +V+SW ALI GY N +AI
Sbjct: 301 VDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 400 MFEQMLRE-RVIPNHVTFLAVLSAC 423
+F +M+ + V PNH TF + AC
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 136/297 (45%), Gaps = 16/297 (5%)
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
S TF++++++ ++G+ +H+ ++ + DS + +LI +YSK G A+ F+
Sbjct: 62 SVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFE 121
Query: 271 QM---PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLAS 327
M ++ V W++++A Y +G +A+ +++E + G + + + VIR C
Sbjct: 122 TMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDF 181
Query: 328 LEHAKQAHAALVRHG-FGSDIVANTALVDFYSKW-GRMEDARHVFDRMHRKNVISWNALI 385
+ + L++ G F SD+ +L+D + K E+A VFD+M NV++W +I
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMI 241
Query: 386 AGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS-----YSGLSERGWEIFYSMS 440
G +AI+ F M+ + T +V SAC+ G W I +
Sbjct: 242 TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV 301
Query: 441 RDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNL 497
D + M+ C +G +D+ + R + + W AL+T + NL
Sbjct: 302 DDVECSLVDMYAKC-----SADGSVDDCRKVFDRME-DHSVMSWTALITGYMKNCNL 352
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 301 LEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKW 360
L RD +D T S +++ C+R K HA L+ D V +L+ YSK
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 361 GRMEDARHVFDRMHR---KNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
G A VF+ M R ++V+SW+A++A YGN+G+ AI++F + L ++PN +
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 418 AVLSACSYSGLS-------------------------------------ERGWEIFYSMS 440
AV+ ACS S E +++F MS
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 441 RDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELG 500
+ V M CM RE + F + + FE K ++ +AC NL LG
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAI--RFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 501 K 501
K
Sbjct: 289 K 289
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/552 (37%), Positives = 330/552 (59%), Gaps = 24/552 (4%)
Query: 156 VKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF-------LFMWVEFND 208
VK +++AR+ F M RDVVSW T+I G SG EA LF +F W
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 209 GRSRT---------FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVAC-------AL 252
G + F M + + + ++M + C +
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 253 IDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDH 312
I Y++CG I +A+ FD+MP++ V W ++IAGY+ G+S EAL ++++M G +++
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
+ S + C + +LE KQ H LV+ G+ + AL+ Y K G +E+A +F
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 373 MHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG 432
M K+++SWN +IAGY HG GE A++ FE M RE + P+ T +AVLSACS++GL ++G
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 433 WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACR 492
+ FY+M++D+ V P + HYACM++LLGR GLL++A L++ PFEP +W LL A R
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASR 589
Query: 493 MHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTC 552
+HGN EL + AA+K++ M+P YV+L N+Y SSG+ + + ++ KG++ +P
Sbjct: 590 VHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGY 649
Query: 553 TWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEE-QRL 611
+WIE++ + H F GD+ H + EI+ ++E+ + + GY+ + ++L DV+EEE +R+
Sbjct: 650 SWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERM 709
Query: 612 QQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHH 671
+YHSE+LA+A+G++ P+++ + RVC DCHNAIK +A +TGR I++RD +RFHH
Sbjct: 710 VRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHH 769
Query: 672 FRNATCSCGDYW 683
F++ +CSCGDYW
Sbjct: 770 FKDGSCSCGDYW 781
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 150/309 (48%), Gaps = 12/309 (3%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA ELF+ + + +++A++ V + K++F+ M ++ N
Sbjct: 299 EARELFDKMPERNEV------SWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNT 348
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ + +CG + +A+ LF MP+RD VSW +I G SG EA LF+ M E
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
+F++ + A + +++G+Q+H +K G FV AL+ MY KCGSIE+A F
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEH 330
+M K V WN++IAGY+ HG+ E AL + M+ G K D T+ V+ C ++
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 528
Query: 331 AKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGY 388
+Q + + +G + +VD + G +EDA ++ M + W L+
Sbjct: 529 GRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGAS 588
Query: 389 GNHGQGEQA 397
HG E A
Sbjct: 589 RVHGNTELA 597
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 126/535 (23%), Positives = 230/535 (42%), Gaps = 105/535 (19%)
Query: 78 SQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMI 137
S + G CN EA+ +F+ + + +Y+ +++ + +K+F+ M
Sbjct: 72 SSYMRTGRCN---EALRVFKRM------PRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 138 SSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFG 197
E DL N ++ +V+ + AR+LF MPERDV SW T++ G +G +A
Sbjct: 123 ----ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 198 LFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVAC-ALIDMY 256
+F M E ND ++ ++ A +Q + +C L + V+ L+ +
Sbjct: 179 VFDRM-PEKND---VSWNALLSA-----YVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 257 SKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTIS 316
K I +A+ FD M + V WN+II GYA G +EA ++ D D FT +
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDVFTWT 285
Query: 317 IVIRICVRLASLEHAKQA------------HAALVRHGFGSDIVANTALVDF-------- 356
++ ++ +E A++ +A L + G + L D
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 357 -------YSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
Y++ G++ +A+++FD+M +++ +SW A+IAGY G +A+++F QM RE
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 410 IPNHVTFLAVLSACS-----------YSGLSERGWE------------------------ 434
N +F + LS C+ + L + G+E
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 435 IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRRAPFEPTKNMWVALLTAC 491
+F M+ V + MI R G + A F ++R +P VA+L+AC
Sbjct: 466 LFKEMAGKDIVS-----WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 492 RMHGNLELGKFAAEKLYEM--DPGKLCN---YVMLLNIYNSSGKLKEAAGVLQTL 541
G ++ G+ + Y M D G + N Y ++++ +G L++A +++ +
Sbjct: 521 SHTGLVDKGR---QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 183/429 (42%), Gaps = 83/429 (19%)
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
N ++ +++ G ARKLF +MPERD+VSW +I G V + + +A LF M
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM------ 152
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
+ C+ + G Y++ G ++DA+
Sbjct: 153 ----------------------PERDVCSWNTMLSG-----------YAQNGCVDDARSV 179
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKID----------------- 311
FD+MPEK V WN++++ Y + EEA ++ + R++ A +
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLF-KSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 312 -HFTISIVIRICVRLASL--EHAKQAHAALVRHGFG----SDIVANTALVDFYSKWGRME 364
F S+ +R V ++ +A+ R F D+ TA+V Y + +E
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 365 DARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP--NHVTFLAVLSA 422
+AR +FD+M +N +SWNA++AGY + E A ++F+ V+P N T+ +++
Sbjct: 299 EARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFD------VMPCRNVSTWNTMITG 352
Query: 423 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRRAPFEP 479
+ G +F M + V +A MI + G EA F + R
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVS-----WAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 480 TKNMWVALLTACRMHGNLELGKFAAEKLYE--MDPGKLCNYVMLLNIYNSSGKLKEAAGV 537
++ + + L+ C LELGK +L + + G +LL +Y G ++EA +
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL-MYCKCGSIEEANDL 466
Query: 538 LQTLKRKGL 546
+ + K +
Sbjct: 467 FKEMAGKDI 475
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 143/320 (44%), Gaps = 46/320 (14%)
Query: 253 IDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDH 312
I Y + G +A F +MP ++V +N +I+GY +G E A ++ EM + D
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DL 126
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
+ +++I+ VR +L A++ + D+ + ++ Y++ G ++DAR VFDR
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 373 MHRKNVISWNALIAGYGNHGQGEQAIQMFE---------------------------QML 405
M KN +SWNAL++ Y + + E+A +F+ Q
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFF 242
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
+ + V++ +++ + SG + ++F D + M+ + ++
Sbjct: 243 DSMNVRDVVSWNTIITGYAQSGKIDEARQLF-----DESPVQDVFTWTAMVSGYIQNRMV 297
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGK-LCNYVMLLNI 524
+EA L + P E + W A+L +E+ A++L+++ P + + + ++
Sbjct: 298 EEARELFDKMP-ERNEVSWNAMLAGYVQGERMEM----AKELFDVMPCRNVSTWNTMITG 352
Query: 525 YNSSGKLKEAAGVLQTLKRK 544
Y GK+ EA + + ++
Sbjct: 353 YAQCGKISEAKNLFDKMPKR 372
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/583 (36%), Positives = 339/583 (58%), Gaps = 10/583 (1%)
Query: 111 STYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
S++ + C L I K+ G++ D+++ + +++M+ CG + DARK+F +
Sbjct: 77 SSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDE 136
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTF------ATMVRASAGL 224
+P+R++VSW ++I G +G+ +A LF + V+ ND F +++ A + +
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 225 GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGS--IEDAQCAFDQMPEKTTVGWNS 282
+ IHS +K G V L+D Y+K G + A+ FDQ+ +K V +NS
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 283 IIAGYALHGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH 341
I++ YA G S EA ++ + ++ + T+S V+ +L K H ++R
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 342 GFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMF 401
G D++ T+++D Y K GR+E AR FDRM KNV SW A+IAGYG HG +A+++F
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 402 EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGR 461
M+ V PN++TF++VL+ACS++GL GW F +M V+P HY CM++LLGR
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 462 EGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVML 521
G L +A+ LI+R +P +W +LL ACR+H N+EL + + +L+E+D Y++L
Sbjct: 437 AGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLL 496
Query: 522 LNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKV 581
+IY +G+ K+ V +K +GL P + +E+ + H FL GD+ H Q ++IY+ +
Sbjct: 497 SHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFL 556
Query: 582 DEILDEISRHGYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIAFGLINTPDWTPLQITQGH 640
E+ ++ GY+ + DVDEEE+ + + HSEKLAIAFG++NT + + + +
Sbjct: 557 AELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNL 616
Query: 641 RVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
RVC DCHN IKLI+ + RE VVRDA RFHHF++ CSCGDYW
Sbjct: 617 RVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 189/372 (50%), Gaps = 31/372 (8%)
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW-VEFNDGRSRTFATMVRASAGLGLIQV 229
+ + DV SW +VI L SGD +EA F M + RS +F ++A + L I
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRS-SFPCAIKACSSLFDIFS 94
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
G+Q H A G D FV+ ALI MYS CG +EDA+ FD++P++ V W S+I GY L
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 290 HGYSEEALSIYLEM------RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
+G + +A+S++ ++ D +D + VI C R+ + + H+ +++ GF
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 344 GSDIVANTALVDFYSKWGR--MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMF 401
+ L+D Y+K G + AR +FD++ K+ +S+N++++ Y G +A ++F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 402 EQMLRERVIP-NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 460
++++ +V+ N +T VL A S+SG G I + R ++ + +I++
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSIIDMYC 333
Query: 461 REGLLDEAFALIRRAPFEPTKNM----WVALLTACRMHGN----LELGKFAAEKLYEMDP 512
+ G ++ A R F+ KN W A++ MHG+ LEL F A +D
Sbjct: 334 KCGRVETA-----RKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALEL--FPA----MIDS 382
Query: 513 GKLCNYVMLLNI 524
G NY+ +++
Sbjct: 383 GVRPNYITFVSV 394
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 159/374 (42%), Gaps = 64/374 (17%)
Query: 269 FDQMPEKTTV-GWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLAS 327
F++ +KT V WNS+IA A G S EAL + MR + I+ C L
Sbjct: 32 FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFD 91
Query: 328 LEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAG 387
+ KQ H G+ SDI ++AL+ YS G++EDAR VFD + ++N++SW ++I G
Sbjct: 92 IFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRG 151
Query: 388 YGNHGQGEQAIQMFEQMLRERVIPNHVTFL------AVLSACS---YSGLSE-------- 430
Y +G A+ +F+ +L + + FL +V+SACS GL+E
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 431 ------------------RGWEIFYSMSR---DHKVKPRAMHYACMIELLGREGLLDEAF 469
+G E +++R D V + Y ++ + + G+ +EAF
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 470 ALIRRAPFEPTKNMWV--------ALLTACRMHGNLELGKFAAEKLYEMD-PGKLCNYVM 520
+ RR KN V +L A G L +GK +++ M +
Sbjct: 272 EVFRRL----VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS 327
Query: 521 LLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQK 580
++++Y G+++ A +K K +R +W A + G H + +
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVR-----SWT-------AMIAGYGMHGHAAKALEL 375
Query: 581 VDEILDEISRHGYI 594
++D R YI
Sbjct: 376 FPAMIDSGVRPNYI 389
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/606 (37%), Positives = 353/606 (58%), Gaps = 14/606 (2%)
Query: 85 LCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPD 144
LC+ R L E+ L ++G YDAL+N C+ R++R ++V +MI + + P
Sbjct: 30 LCSNGRLQEALLEMAMLG---PEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPA 86
Query: 145 LYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWV 204
Y+ R+L+ + KC + DARK+ +MPE++VVSW +I +G SEA +F M
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 205 EFNDGRSRTFATM----VRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG 260
TFAT+ +RAS GLGL G+QIH +K FV +L+DMY+K G
Sbjct: 147 SDGKPNEFTFATVLTSCIRAS-GLGL---GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 202
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
I++A+ F+ +PE+ V +IIAGYA G EEAL ++ + G ++ T + ++
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLT 262
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
LA L+H KQAH ++R V +L+D YSK G + AR +FD M + IS
Sbjct: 263 ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 322
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRE-RVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 439
WNA++ GY HG G + +++F M E RV P+ VT LAVLS CS+ + + G IF M
Sbjct: 323 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGM 382
Query: 440 -SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE 498
+ ++ KP HY C++++LGR G +DEAF I+R P +PT + +LL ACR+H +++
Sbjct: 383 VAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVD 442
Query: 499 LGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVK 558
+G+ +L E++P NYV+L N+Y S+G+ + V + +K + P +WI+ +
Sbjct: 443 IGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHE 502
Query: 559 KQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEE-QRLQQYHSE 617
+ H F D++H + +E+ K+ EI ++ + GY+ + +L DVDEE+ +++ HSE
Sbjct: 503 QTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSE 562
Query: 618 KLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATC 677
KLA+ FGLI T + P+++ + R+C DCHN K+ + V RE+ +RD +RFH + C
Sbjct: 563 KLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGIC 622
Query: 678 SCGDYW 683
SCGDYW
Sbjct: 623 SCGDYW 628
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/618 (35%), Positives = 359/618 (58%), Gaps = 23/618 (3%)
Query: 85 LCNRHR--EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSG-F 141
LC + EA+E + LEG D T +++ C L +R K++ Y + +G
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPD--EFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLF 201
+ + ++ + ++ M+ C +L R++F M +R + W +I G + EA L LF
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA--LLLF 392
Query: 202 MWVEFNDG---RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSK 258
+ +E + G S T A +V A G IH +K G+ D FV L+DMYS+
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 259 CGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI-------- 310
G I+ A F +M ++ V WN++I GY + E+AL + +M++ K+
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 311 ---DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDAR 367
+ T+ ++ C L++L K+ HA +++ +D+ +ALVD Y+K G ++ +R
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 368 HVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSG 427
VFD++ +KNVI+WN +I YG HG G++AI + M+ + V PN VTF++V +ACS+SG
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 428 LSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTK-NMWVA 486
+ + G IFY M D+ V+P + HYAC+++LLGR G + EA+ L+ P + K W +
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 487 LLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
LL A R+H NLE+G+ AA+ L +++P +YV+L NIY+S+G +A V + +K +G+
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 547 RMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDE 606
R P C+WIE + H F+ GD SH Q++++ ++ + + + + GY+ + +L +V+E
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Query: 607 EEQR-LQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRD 665
+E+ L HSEKLAIAFG++NT T +++ + RVC DCH A K I+ + REI++RD
Sbjct: 813 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 666 ASRFHHFRNATCSCGDYW 683
RFH F+N TCSCGDYW
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 164/350 (46%), Gaps = 12/350 (3%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPD-LYMMNRVLLMHVKCGLMLDARKLFGD 170
+ AL+ L+ + K++ ++ G+ D + + N ++ ++ KCG K+F
Sbjct: 99 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL---I 227
+ ER+ VSW ++I L + A F M E + S T ++V A + L + +
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
+G+Q+H+ L+ G +SF+ L+ MY K G + ++ + V WN++++
Sbjct: 219 MMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG-FGSD 346
+ EAL EM G + D FTIS V+ C L L K+ HA +++G +
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
+ALVD Y ++ R VFD M + + WNA+IAGY + ++A+ +F M
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 407 ER-VIPNHVTFLAVLSACSYSGLSER-----GWEIFYSMSRDHKVKPRAM 450
++ N T V+ AC SG R G+ + + RD V+ M
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 3/132 (2%)
Query: 295 EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD--IVANTA 352
EA+ Y++M G K D++ +++ L +E KQ HA + + G+G D VANT
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT- 138
Query: 353 LVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPN 412
LV+ Y K G VFDR+ +N +SWN+LI+ + + E A++ F ML E V P+
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 413 HVTFLAVLSACS 424
T ++V++ACS
Sbjct: 199 SFTLVSVVTACS 210
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/510 (40%), Positives = 308/510 (60%), Gaps = 1/510 (0%)
Query: 175 DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIH 234
D+V+W ++ G S D + LF M + T AT+ + L I G+Q+H
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 235 SCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSE 294
+ A+K G D +V+ ++DMY KCG + AQ AFD +P V W ++I+G +G E
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 295 EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALV 354
A ++ +MR G D FTI+ + + L +LE +Q HA ++ +D T+LV
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 355 DFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHV 414
D Y+K G ++DA +F R+ N+ +WNA++ G HG+G++ +Q+F+QM + P+ V
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV 720
Query: 415 TFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
TF+ VLSACS+SGL ++ SM D+ +KP HY+C+ + LGR GL+ +A LI
Sbjct: 721 TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIES 780
Query: 475 APFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEA 534
E + +M+ LL ACR+ G+ E GK A KL E++P YV+L N+Y ++ K E
Sbjct: 781 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 840
Query: 535 AGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYI 594
+K ++ P +WIEVK + H F+ D+S+ QT+ IY+KV +++ +I + GY+
Sbjct: 841 KLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYV 900
Query: 595 KENEMLLPDVDEEE-QRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLI 653
E + L DV+EEE +R YHSEKLA+AFGL++TP TP+++ + RVCGDCHNA+K I
Sbjct: 901 PETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYI 960
Query: 654 AMVTGREIVVRDASRFHHFRNATCSCGDYW 683
A V REIV+RDA+RFH F++ CSCGDYW
Sbjct: 961 AKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 220/442 (49%), Gaps = 12/442 (2%)
Query: 97 EILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHV 156
+++E + +C V T+ ++ V + S+ ++V + G + L + N ++ M+
Sbjct: 305 DMVESDVECDQV---TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYC 361
Query: 157 KCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFAT 216
K AR +F +M ERD++SW +VI G+ +G EA LF+ + T +
Sbjct: 362 KLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421
Query: 217 MVRASAGL--GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE 274
+++A++ L GL + +Q+H A+K+ DSFV+ ALID YS+ +++A+ F++
Sbjct: 422 VLKAASSLPEGL-SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HN 479
Query: 275 KTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQA 334
V WN+++AGY + L ++ M G + D FT++ V + C L ++ KQ
Sbjct: 480 FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 335 HAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQG 394
HA ++ G+ D+ ++ ++D Y K G M A+ FD + + ++W +I+G +G+
Sbjct: 540 HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEE 599
Query: 395 EQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYAC 454
E+A +F QM V+P+ T + A S E+G +I ++ +
Sbjct: 600 ERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI-HANALKLNCTNDPFVGTS 658
Query: 455 MIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE--LGKFAAEKLYEMDP 512
++++ + G +D+A+ L +R W A+L HG + L F K + P
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNI-TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 717
Query: 513 GKLCNYVMLLNIYNSSGKLKEA 534
K+ ++ +L+ + SG + EA
Sbjct: 718 DKV-TFIGVLSACSHSGLVSEA 738
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 185/364 (50%), Gaps = 18/364 (4%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+ ++LF ++ +G+ +D T + C L +I K+V Y I SG++ DL++ +
Sbjct: 500 KTLKLFALMHKQGERSD--DFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 557
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
+L M+VKCG M A+ F +P D V+W T+I G +++G+ AF +F M +
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
T AT+ +AS+ L ++ GRQIH+ ALK+ D FV +L+DMY+KCGSI+DA C F
Sbjct: 618 EFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFK 677
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA---- 326
++ WN+++ G A HG +E L ++ +M+ G K D T V+ C
Sbjct: 678 RIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSE 737
Query: 327 SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS-WNALI 385
+ +H + H +G +I + L D + G ++ A ++ + M + S + L+
Sbjct: 738 AYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLL 794
Query: 386 AGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE---IFYSMSRD 442
A G E ++ ++L + + VL + Y+ S+ W+ + +M +
Sbjct: 795 AACRVQGDTETGKRVATKLLELEPLDSSAY---VLLSNMYAAASK--WDEMKLARTMMKG 849
Query: 443 HKVK 446
HKVK
Sbjct: 850 HKVK 853
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 153/319 (47%), Gaps = 20/319 (6%)
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV 248
SG YS F M + TF M+ + + + +G+Q+H ALK+G+ V
Sbjct: 293 SGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTV 352
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
+ +LI+MY K A+ FD M E+ + WNS+IAG A +G EA+ +++++ G
Sbjct: 353 SNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGL 412
Query: 309 KIDHFTISIVIRICVRLAS-LEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDAR 367
K D +T++ V++ L L +KQ H ++ SD +TAL+D YS+ M++A
Sbjct: 413 KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 368 HVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSG 427
+F+R H ++++WNA++AGY G + +++F M ++ + T V C +
Sbjct: 473 ILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF-- 529
Query: 428 LSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL--IRRAPFE------P 479
+++++ +V A+ ++L G+LD + A F P
Sbjct: 530 --------LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 480 TKNMWVALLTACRMHGNLE 498
W +++ C +G E
Sbjct: 582 DDVAWTTMISGCIENGEEE 600
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 37/285 (12%)
Query: 143 PDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSG-----DYSEAFG 197
P+ +++N ++ M+ KCG + AR++F MP+RD+VSW +++ S + +AF
Sbjct: 72 PERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFL 131
Query: 198 LFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYS 257
LF + + T + M++ G + H A K+G+ GD FVA AL+++Y
Sbjct: 132 LFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYL 191
Query: 258 KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISI 317
K G +++ + F++MP + V WN ++ Y G+ EEA+ + SG + T+ +
Sbjct: 192 KFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRL 251
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKN 377
+ RI G D S G+++ + D
Sbjct: 252 LARIS---------------------GDD-----------SDAGQVKSFANGNDASSVSE 279
Query: 378 VISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
+I N ++ Y + GQ ++ F M+ V + VTF+ +L+
Sbjct: 280 IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLAT 324
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAG 286
+ +G+ H+ L + F+ LI MYSKCGS+ A+ FD+MP++ V WNSI+A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 287 YALHGYS-----EEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH 341
YA ++A ++ +R T+S ++++C+ + ++ H +
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 342 GFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMF 401
G D ALV+ Y K+G++++ + +F+ M ++V+ WN ++ Y G E+AI +
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 402 EQMLRERVIPNHVTF 416
+ PN +T
Sbjct: 235 SAFHSSGLNPNEITL 249
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 144/335 (42%), Gaps = 34/335 (10%)
Query: 90 REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMN 149
++A LF IL D T ++ +C+ + + Y G + D ++
Sbjct: 127 QQAFLLFRILR--QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG 184
Query: 150 RVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDG 209
++ +++K G + + + LF +MP RDVV W ++ ++ G EA L
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL----------- 233
Query: 210 RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
S F S+GL ++ + L + GD S G ++
Sbjct: 234 -SSAFH-----SSGLNPNEI-----TLRLLARISGDD----------SDAGQVKSFANGN 272
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
D + N ++ Y G L + +M +S + D T +++ V++ SL
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
+Q H ++ G + + +L++ Y K + AR VFD M +++ISWN++IAG
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS 424
+G +A+ +F Q+LR + P+ T +VL A S
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 319 IRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV 378
+R + + L K HA ++ + L+ YSK G + AR VFD+M +++
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 379 ISWNALIAGYGNHGQG-----EQAIQMFEQMLRERVIPNHVTFLAVLSACSYSG 427
+SWN+++A Y + +QA +F + ++ V + +T +L C +SG
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/570 (35%), Positives = 340/570 (59%), Gaps = 8/570 (1%)
Query: 122 GLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHV----KCGLMLDARKLFGDMPER-DV 176
G+ SI ++++ + I G + + L+ ++ M A K+F + + +V
Sbjct: 26 GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85
Query: 177 VSWMTVIGGLVDSGDYSEAFGLFLFMWVE-FNDGRSRTFATMVRASAGLGLIQVGRQIHS 235
W T+I G + G+ AF L+ M V + + T+ +++A + +++G IHS
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 236 CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEE 295
++ G G +V +L+ +Y+ CG + A FD+MPEK V WNS+I G+A +G EE
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 296 ALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVD 355
AL++Y EM G K D FTI ++ C ++ +L K+ H +++ G ++ ++ L+D
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 356 FYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM-LRERVIPNHV 414
Y++ GR+E+A+ +FD M KN +SW +LI G +G G++AI++F+ M E ++P +
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 415 TFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
TF+ +L ACS+ G+ + G+E F M ++K++PR H+ CM++LL R G + +A+ I+
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 475 APFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEA 534
P +P +W LL AC +HG+ +L +FA ++ +++P +YV+L N+Y S + +
Sbjct: 386 MPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDV 445
Query: 535 AGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYI 594
+ + + R G++ +P + +EV + H FL GDKSH Q+ IY K+ E+ + GY+
Sbjct: 446 QKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYV 505
Query: 595 KENEMLLPDVDEEE-QRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLI 653
+ + DV+EEE + YHSEK+AIAF LI+TP+ +P+ + + RVC DCH AIKL+
Sbjct: 506 PQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLV 565
Query: 654 AMVTGREIVVRDASRFHHFRNATCSCGDYW 683
+ V REIVVRD SRFHHF+N +CSC DYW
Sbjct: 566 SKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 167/344 (48%), Gaps = 28/344 (8%)
Query: 92 AMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRV 151
A L+ + + G + TY L+ + +R + + + +I SGF +Y+ N +
Sbjct: 104 AFSLYREMRVSG-LVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSL 162
Query: 152 LLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRS 211
L ++ CG + A K+F MPE+D+V+W +VI G ++G EA L+ M +
Sbjct: 163 LHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDG 222
Query: 212 RTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQ 271
T +++ A A +G + +G+++H +K+G+ + + L+D+Y++CG +E+A+ FD+
Sbjct: 223 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE 282
Query: 272 MPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKID-HFTISIVIRICVRLASLEH 330
M +K +V W S+I G A++G+ +EA+ ++ M + + T ++ C
Sbjct: 283 MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYAC-------- 334
Query: 331 AKQAHAALVRHGF------------GSDIVANTALVDFYSKWGRMEDARHVFDRM-HRKN 377
+H +V+ GF I +VD ++ G+++ A M + N
Sbjct: 335 ---SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPN 391
Query: 378 VISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS 421
V+ W L+ HG + A F ++ ++ PNH +LS
Sbjct: 392 VVIWRTLLGACTVHGDSDLA--EFARIQILQLEPNHSGDYVLLS 433
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 335/574 (58%), Gaps = 2/574 (0%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T +++ C LR + K ++NYM+ +GF + + N ++ ++ KCG M+ AR +F M
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
+D VSW ++I G + SGD EA LF M + T+ ++ S L ++ G+
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
+HS +K G+ D V+ ALIDMY+KCG + D+ F M TV WN++I+ G
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 488
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
L + +MR S D T + + +C LA+ K+ H L+R G+ S++
Sbjct: 489 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
AL++ YSK G +E++ VF+RM R++V++W +I YG +G+GE+A++ F M + ++P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 412 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 471
+ V F+A++ ACS+SGL + G F M +K+ P HYAC+++LL R + +A
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 472 IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKL 531
I+ P +P ++W ++L ACR G++E + + ++ E++P ++ N Y + K
Sbjct: 669 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 728
Query: 532 KEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRH 591
+ + + ++LK K + P +WIEV K H F GD S Q++ IY+ ++ + +++
Sbjct: 729 DKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKE 788
Query: 592 GYIKENEMLLPDV--DEEEQRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNA 649
GYI + + ++ +EE++RL HSE+LAIAFGL+NT TPLQ+ + RVCGDCH
Sbjct: 789 GYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEV 848
Query: 650 IKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
KLI+ + GREI+VRDA+RFH F++ TCSC D W
Sbjct: 849 TKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 178/332 (53%), Gaps = 5/332 (1%)
Query: 97 EILELEGDCADVGAS----TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVL 152
E LE G + S T+ +++ C GL V+ ++ GFE DL++ N ++
Sbjct: 89 EALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALV 148
Query: 153 LMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR 212
M+ + GL+ AR++F +MP RD+VSW ++I G G Y EA ++ + + S
Sbjct: 149 DMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSF 208
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
T ++++ A L +++ G+ +H ALK GV V L+ MY K DA+ FD+M
Sbjct: 209 TVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEM 268
Query: 273 PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAK 332
+ +V +N++I GY EE++ ++LE D K D T+S V+R C L L AK
Sbjct: 269 DVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAK 327
Query: 333 QAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHG 392
+ +++ GF + L+D Y+K G M AR VF+ M K+ +SWN++I+GY G
Sbjct: 328 YIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSG 387
Query: 393 QGEQAIQMFEQMLRERVIPNHVTFLAVLSACS 424
+A+++F+ M+ +H+T+L ++S +
Sbjct: 388 DLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 141/254 (55%), Gaps = 1/254 (0%)
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
P ++V W ++I +G + EA + + TF ++++A AGL ++G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
++ L MG D FV AL+DMYS+ G + A+ FD+MP + V WNS+I+GY+ HG
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
Y EEAL IY E+++S D FT+S V+ L ++ + H ++ G S +V N
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
LV Y K+ R DAR VFD M ++ +S+N +I GY E++++MF + L ++ P
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKP 305
Query: 412 NHVTFLAVLSACSY 425
+ +T +VL AC +
Sbjct: 306 DLLTVSSVLRACGH 319
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 1/193 (0%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM-PEKTTVGWNSIIAGYAL 289
R+IH+ + +G+ F + LID YS + F ++ P K WNSII ++
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
+G EAL Y ++R+S D +T VI+ C L E + ++ GF SD+
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
ALVD YS+ G + AR VFD M ++++SWN+LI+GY +HG E+A++++ ++ +
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 410 IPNHVTFLAVLSA 422
+P+ T +VL A
Sbjct: 204 VPDSFTVSSVLPA 216
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Query: 326 ASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH-RKNVISWNAL 384
++L ++ HA ++ G S + L+D YS + + VF R+ KNV WN++
Sbjct: 18 SNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSI 77
Query: 385 IAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 444
I + +G +A++ + ++ +V P+ TF +V+ AC+ +E G ++ Y D
Sbjct: 78 IRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG-DLVYEQILDMG 136
Query: 445 VKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE 498
+ ++++ R GLL A + P + W +L++ HG E
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-WNSLISGYSSHGYYE 189
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Query: 111 STYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
+T+ + +C L + R K++ ++ G+E +L + N ++ M+ KCG + ++ ++F
Sbjct: 510 ATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFER 569
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVG 230
M RDVV+W +I G+ +A F M S F ++ A + GL+ G
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Query: 231 RQIHSCALKMGV--GGDSFV---ACALIDMYSKCGSIEDAQCAFDQMPEKTTVG-WNSII 284
+C KM D + AC ++D+ S+ I A+ MP K W S++
Sbjct: 630 L---ACFEKMKTHYKIDPMIEHYAC-VVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685
Query: 285 AGYALHGYSEEA 296
G E A
Sbjct: 686 RACRTSGDMETA 697
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/601 (34%), Positives = 332/601 (55%), Gaps = 3/601 (0%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP 143
GL + R + +F +++E + TY +++ C+ L + +++ + +I + F+
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPN--QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
+ Y+ + ++ M+ K G + A + +DVVSW T+I G +A F M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 204 VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIE 263
V A AGL ++ G+QIH+ A G D AL+ +YS+CG IE
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
++ AF+Q + WN++++G+ G +EEAL +++ M G ++FT ++
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
A+++ KQ HA + + G+ S+ AL+ Y+K G + DA F + KN +SWNA
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
+I Y HG G +A+ F+QM+ V PNHVT + VLSACS+ GL ++G F SM+ ++
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
+ P+ HY C++++L R GLL A I+ P +P +W LL+AC +H N+E+G+FA
Sbjct: 824 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHA 563
A L E++P YV+L N+Y S K Q +K KG++ P +WIEVK H+
Sbjct: 884 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943
Query: 564 FLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQQY-HSEKLAIA 622
F GD++H EI++ ++ S GY+++ LL ++ E++ + HSEKLAI+
Sbjct: 944 FYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAIS 1003
Query: 623 FGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDY 682
FGL++ P P+ + + RVC DCH IK ++ V+ REI+VRDA RFHHF CSC DY
Sbjct: 1004 FGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
Query: 683 W 683
W
Sbjct: 1064 W 1064
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 236/505 (46%), Gaps = 47/505 (9%)
Query: 80 IEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISS 139
I L C +AMELF+ + L+G D ++T +LV C ++ +++ Y
Sbjct: 361 INGLSQCGYGEKAMELFKRMHLDGLEPD--SNTLASLVVACSADGTLFRGQQLHAYTTKL 418
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSW--MTVIGGLVDSGDYSEAFG 197
GF + + +L ++ KC + A F + +VV W M V GL+D D +F
Sbjct: 419 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD--DLRNSFR 476
Query: 198 LFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYS 257
+F M +E T+ ++++ LG +++G QIHS +K +++V LIDMY+
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 258 KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISI 317
K G ++ A + K V W ++IAGY + + ++AL+ + +M D G + D ++
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKN 377
+ C L +L+ +Q HA GF SD+ ALV YS+ G++E++ F++ +
Sbjct: 597 AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656
Query: 378 VISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI-- 435
I+WNAL++G+ G E+A+++F +M RE + N+ TF + + A S + ++G ++
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 716
Query: 436 ---------------------------------FYSMSRDHKVKPRAMHYACMIELLGRE 462
F +S ++V A+ A G E
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSE 776
Query: 463 GLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL---YEMDPGKLCNYV 519
L ++F + + P V +L+AC G ++ G E + Y + P K +YV
Sbjct: 777 AL--DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP-KPEHYV 833
Query: 520 MLLNIYNSSGKLKEAAGVLQTLKRK 544
++++ +G L A +Q + K
Sbjct: 834 CVVDMLTRAGLLSRAKEFIQEMPIK 858
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 193/387 (49%), Gaps = 4/387 (1%)
Query: 113 YDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
+ ++++ C + S+ +++ ++ GF D Y+ N ++ ++ G ++ A +F +M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQ 232
+RD V++ T+I GL G +A LF M ++ + S T A++V A + G + G+Q
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 233 IHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGY 292
+H+ K+G ++ + AL+++Y+KC IE A F + + V WN ++ Y L
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 293 SEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTA 352
+ I+ +M+ + +T +++ C+RL LE +Q H+ +++ F + +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 353 LVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPN 412
L+D Y+K G+++ A + R K+V+SW +IAGY + ++A+ F QML + +
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 413 HVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI 472
V +SAC+ + G +I A ++ L R G ++E++
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA-LVTLYSRCGKIEESYLAF 649
Query: 473 RRAPFEPTKNM-WVALLTACRMHGNLE 498
+ E N+ W AL++ + GN E
Sbjct: 650 EQT--EAGDNIAWNALVSGFQQSGNNE 674
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 216/445 (48%), Gaps = 37/445 (8%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDS 189
+K+ + ++ G + + + ++ ++ G + A K+F +MPER + +W +I L
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASR 164
Query: 190 GDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL-IQVGRQIHSCALKMGVGGDSFV 248
E FGLF+ M E TF+ ++ A G + V QIH+ L G+ + V
Sbjct: 165 NLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVV 224
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
LID+YS+ G ++ A+ FD + K W ++I+G + + EA+ ++ +M G
Sbjct: 225 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI 284
Query: 309 KIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARH 368
+ S V+ C ++ SLE +Q H +++ GF SD ALV Y G + A H
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 369 VFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGL 428
+F M +++ +++N LI G G GE+A+++F++M + + P+ T +++ ACS G
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 429 SERGWEIFYSMSR-----DHKVK-------------PRAMHYACMIE---------LLGR 461
RG ++ ++ ++K++ A+ Y E +L
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 462 EGLLDE---AFALIRRAPFE---PTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKL 515
GLLD+ +F + R+ E P + + ++L C G+LELG+ ++ + + +L
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN-FQL 523
Query: 516 CNYV--MLLNIYNSSGKLKEAAGVL 538
YV +L+++Y GKL A +L
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 182/366 (49%), Gaps = 6/366 (1%)
Query: 112 TYDALVNVCVGLR-SIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
T+ ++ C G + V+++ ++ G + N ++ ++ + G + AR++F
Sbjct: 188 TFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 247
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVG 230
+ +D SW+ +I GL + +EA LF M+V F++++ A + +++G
Sbjct: 248 LRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
Q+H LK+G D++V AL+ +Y G++ A+ F M ++ V +N++I G +
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
GY E+A+ ++ M G + D T++ ++ C +L +Q HA + GF S+
Sbjct: 368 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 351 TALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI 410
AL++ Y+K +E A F +NV+ WN ++ YG + ++F QM E ++
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 411 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYAC--MIELLGREGLLDEA 468
PN T+ ++L C G E G +I S+ K + Y C +I++ + G LD A
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 469 FALIRR 474
+ ++ R
Sbjct: 545 WDILIR 550
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 136/318 (42%), Gaps = 48/318 (15%)
Query: 225 GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSII 284
G + GR++HS LK+G+ + ++ L D Y G + A FD+MPE+T WN +I
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 285 AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL--EHAKQAHAALVRHG 342
A E +++ M + T S V+ C R S+ + +Q HA ++ G
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQG 217
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFE 402
V L+D YS+ G ++ AR VFD + K+ SW A+I+G + +AI++F
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 403 QMLRERVIPNHVTFLAVLSACSYSGLSERGWE---------------------------- 434
M ++P F +VLSAC E G +
Sbjct: 278 DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 337
Query: 435 -------IFYSMS-RDHKVKPRAMHYACMIELLGREGLLDEAFALIRRA---PFEPTKNM 483
IF +MS RD A+ Y +I L + G ++A L +R EP N
Sbjct: 338 NLISAEHIFSNMSQRD------AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 484 WVALLTACRMHGNLELGK 501
+L+ AC G L G+
Sbjct: 392 LASLVVACSADGTLFRGQ 409
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 20/198 (10%)
Query: 303 MRDSGAKIDHFTISIVIRICVRL-ASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
+ + G + +H T+ ++ C++ SL+ ++ H+ +++ G S+ + L DFY G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 362 RMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS 421
+ A VFD M + + +WN +I + + +F +M+ E V PN TF VL
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 422 AC-----SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAP 476
AC ++ + + I Y RD V +I+L R G +D A R
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNP-----LIDLYSRNGFVDLA-----RRV 244
Query: 477 FEPTK----NMWVALLTA 490
F+ + + WVA+++
Sbjct: 245 FDGLRLKDHSSWVAMISG 262
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/657 (34%), Positives = 355/657 (54%), Gaps = 55/657 (8%)
Query: 78 SQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNV---CVGLRSIRGVKKVFN 134
S IE + + A+E+F + E C + LVNV C L + K++
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNIT----LVNVLPPCASLGTHSLGKQLHC 253
Query: 135 YMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSE 194
+ ++S ++++ N ++ M+ KCG+M +A +F +M +DVVSW ++ G G + +
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFED 313
Query: 195 AFGLF-----------LFMWVEFNDGRSR------------------------TFATMVR 219
A LF + W G ++ T +++
Sbjct: 314 AVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLS 373
Query: 220 ASAGLGLIQVGRQIHSCALKM-------GVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
A +G + G++IH A+K G G ++ V LIDMY+KC ++ A+ FD +
Sbjct: 374 GCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSL 433
Query: 273 P--EKTTVGWNSIIAGYALHGYSEEALSIYLEM--RDSGAKIDHFTISIVIRICVRLASL 328
E+ V W +I GY+ HG + +AL + EM D + + FTIS + C LA+L
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 329 EHAKQAHAALVRHGFGS-DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAG 387
KQ HA +R+ + + + L+D Y+K G + DAR VFD M KN ++W +L+ G
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTG 553
Query: 388 YGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 447
YG HG GE+A+ +F++M R + VT L VL ACS+SG+ ++G E F M V P
Sbjct: 554 YGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
Query: 448 RAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
HYAC+++LLGR G L+ A LI P EP +WVA L+ CR+HG +ELG++AAEK+
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKI 673
Query: 508 YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCG 567
E+ +Y +L N+Y ++G+ K+ + ++ KG++ P C+W+E K F G
Sbjct: 674 TELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVG 733
Query: 568 DKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQ-RLQQYHSEKLAIAFGLI 626
DK+H KEIYQ + + + I GY+ E L DVD+EE+ L HSEKLA+A+G++
Sbjct: 734 DKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGIL 793
Query: 627 NTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
TP ++IT+ RVCGDCH A ++ + +I++RD+SRFHHF+N +CSC YW
Sbjct: 794 TTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 201/440 (45%), Gaps = 50/440 (11%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ + C + S+R + + +GF ++++ N ++ M+ +C + DARK+F +M
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN-DGRSRTFATMVRASAGLGLIQVG 230
DVVSW ++I G A +F M EF + T ++ A LG +G
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG 248
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY--- 287
+Q+H A+ + + FV L+DMY+KCG +++A F M K V WN+++AGY
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 288 ---------------------------ALHGYSE-----EALSIYLEMRDSGAKIDHFTI 315
A+ GY++ EAL + +M SG K + T+
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 316 SIVIRICVRLASLEHAKQAHAALVRH-------GFGSDIVANTALVDFYSKWGRMEDARH 368
V+ C + +L H K+ H +++ G G + + L+D Y+K +++ AR
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 369 VFDRMHRK--NVISWNALIAGYGNHGQGEQAIQMFEQMLRE--RVIPNHVTFLAVLSACS 424
+FD + K +V++W +I GY HG +A+++ +M E + PN T L AC+
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 425 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMW 484
G +I R+ + C+I++ + G + +A L+ + W
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA-RLVFDNMMAKNEVTW 547
Query: 485 VALLTACRMHGNLE--LGKF 502
+L+T MHG E LG F
Sbjct: 548 TSLMTGYGMHGYGEEALGIF 567
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 139/303 (45%), Gaps = 12/303 (3%)
Query: 252 LIDMYSKCGSIEDAQCAFDQMP--EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAK 309
LI Y G + A + P + WNS+I Y +G + + L ++ M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 310 IDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHV 369
D++T V + C ++S+ + AHA + GF S++ ALV YS+ + DAR V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 370 FDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE-RVIPNHVTFLAVLSACSYSGL 428
FD M +V+SWN++I Y G+ + A++MF +M E P+++T + VL C+ G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 429 SERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALL 488
G ++ + + ++ C++++ + G++DEA + + + W A++
Sbjct: 245 HSLGKQL-HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS-WNAMV 302
Query: 489 TACRMHGNLELGKFAAEKLYE----MDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
G E EK+ E MD + + ++ Y G EA GV + +
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMD---VVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 545 GLR 547
G++
Sbjct: 360 GIK 362
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/606 (35%), Positives = 347/606 (57%), Gaps = 19/606 (3%)
Query: 81 EKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSG 140
E L L N R AM+ ++ L C + G RGV + +Y I G
Sbjct: 234 EALTLSNGLR-AMDSVTVVSLLSACTEAGDFN--------------RGVT-IHSYSIKHG 277
Query: 141 FEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFL 200
E +L++ N+++ ++ + G + D +K+F M RD++SW ++I + A LF
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMG-VGGDSFVACALIDMYSKC 259
M + T ++ + LG I+ R + L+ G D + A++ MY+K
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 260 GSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA-KIDHFTISIV 318
G ++ A+ F+ +P + WN+II+GYA +G++ EA+ +Y M + G + T V
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 319 IRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV 378
+ C + +L + H L+++G D+ T+L D Y K GR+EDA +F ++ R N
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 379 ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 438
+ WN LIA +G HG GE+A+ +F++ML E V P+H+TF+ +LSACS+SGL + G F
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM 577
Query: 439 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE 498
M D+ + P HY CM+++ GR G L+ A I+ +P ++W ALL+ACR+HGN++
Sbjct: 578 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 637
Query: 499 LGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVK 558
LGK A+E L+E++P + +V+L N+Y S+GK + + KGLR P + +EV
Sbjct: 638 LGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVD 697
Query: 559 KQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDV-DEEEQRLQQYHSE 617
+ F G+++H +E+Y+++ + ++ GY+ ++ +L DV D+E++ + HSE
Sbjct: 698 NKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSE 757
Query: 618 KLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATC 677
+LAIAF LI TP T ++I + RVCGDCH+ K I+ +T REI+VRD++RFHHF+N C
Sbjct: 758 RLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVC 817
Query: 678 SCGDYW 683
SCGDYW
Sbjct: 818 SCGDYW 823
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 228/473 (48%), Gaps = 56/473 (11%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ +++ C R++ K+ + GF D+Y+ ++ ++ + + +AR LF +M
Sbjct: 155 TFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDG----RSRTFATMVRASAGLGLI 227
P RD+ SW +I G SG+ EA L ++G S T +++ A G
Sbjct: 212 PVRDMGSWNAMISGYCQSGNAKEALTL--------SNGLRAMDSVTVVSLLSACTEAGDF 263
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
G IHS ++K G+ + FV+ LID+Y++ G + D Q FD+M + + WNSII Y
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG-FGSD 346
L+ A+S++ EMR S + D T+ + I +L + + +R G F D
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
I A+V Y+K G ++ AR VF+ + +VISWN +I+GY +G +AI+M+ M
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 407 E-RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
E + N T+++VL ACS +G +G ++ + ++ + + ++ G+ G L
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRL 502
Query: 466 DEAFALIRRAP----------------------------------FEPTKNMWVALLTAC 491
++A +L + P +P +V LL+AC
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 492 RMHGNLELGKFAAEKL---YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
G ++ G++ E + Y + P L +Y ++++Y +G+L+ A ++++
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITP-SLKHYGCMVDMYGRAGQLETALKFIKSM 614
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 146/265 (55%), Gaps = 8/265 (3%)
Query: 164 ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF-LFMWVEFNDGRSRTFATMVRASA 222
AR F + RDV +W +I G +G+ SE F LFM RTF ++++A
Sbjct: 105 ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR 164
Query: 223 GLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNS 282
+ G +IH ALK G D +VA +LI +YS+ ++ +A+ FD+MP + WN+
Sbjct: 165 ---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNA 221
Query: 283 IIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
+I+GY G ++EAL++ +R +D T+ ++ C H+ ++HG
Sbjct: 222 MISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFE 402
S++ + L+D Y+++GR+ D + VFDRM+ +++ISWN++I Y + Q +AI +F+
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 403 QMLRERVIPNHVTFLAVLSACSYSG 427
+M R+ P+ +T +++ S S G
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLG 362
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 142/301 (47%), Gaps = 13/301 (4%)
Query: 248 VACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIY-LEMRDS 306
++ L+++Y G++ A+ FD + + WN +I+GY G S E + + L M S
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 307 GAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDA 366
G D+ T V++ C ++ + H ++ GF D+ +L+ YS++ + +A
Sbjct: 148 GLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 367 RHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYS 426
R +FD M +++ SWNA+I+GY G ++A+ + LR + VT +++LSAC+ +
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-SNGLRAM---DSVTVVSLLSACTEA 260
Query: 427 GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVA 486
G RG I +S S H ++ +I+L G L + + R + W +
Sbjct: 261 GDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS-WNS 318
Query: 487 LLTACRMHGN--LELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
++ A ++ + F +L + P L + L +I + G ++ V RK
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCL-TLISLASILSQLGDIRACRSVQGFTLRK 377
Query: 545 G 545
G
Sbjct: 378 G 378
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 315 ISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH 374
+ + R C L S AK HA LV ++ + LV+ Y G + ARH FD +
Sbjct: 57 VHTLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ 113
Query: 375 RKNVISWNALIAGYGNHGQGEQAIQMFEQ-MLRERVIPNHVTFLAVLSAC 423
++V +WN +I+GYG G + I+ F ML + P++ TF +VL AC
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/597 (35%), Positives = 345/597 (57%), Gaps = 10/597 (1%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA+ +F + L + + S++ +++ +C L+ +R +++ ++ GF D +
Sbjct: 278 EALGMFYSMRL--NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 151 VLLMHVKCGLMLDARKLFGDMP-ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDG 209
+++ + KC MLDA +LF ++ +VVSW +I G + + EA LF M +
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 210 RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
T++ ++ A L +I ++H+ +K S V AL+D Y K G +E+A F
Sbjct: 396 NEFTYSVILTA---LPVISPS-EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRL-ASL 328
+ +K V W++++AGYA G +E A+ ++ E+ G K + FT S ++ +C AS+
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
KQ H ++ S + ++AL+ Y+K G +E A VF R K+++SWN++I+GY
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 571
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 448
HGQ +A+ +F++M + +V + VTF+ V +AC+++GL E G + F M RD K+ P
Sbjct: 572 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631
Query: 449 AMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLY 508
H +CM++L R G L++A +I P +W +L ACR+H ELG+ AAEK+
Sbjct: 632 KEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Query: 509 EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGD 568
M P YV+L N+Y SG +E A V + + + ++ P +WIEVK + ++FL GD
Sbjct: 692 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGD 751
Query: 569 KSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEE-EQRLQQYHSEKLAIAFGLIN 627
+SH +IY K++++ + GY + +L D+D+E ++ + HSE+LAIAFGLI
Sbjct: 752 RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIA 811
Query: 628 TPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHF-RNATCSCGDYW 683
TP +PL I + RVCGDCH IKLIA + REIVVRD++RFHHF + CSCGD+W
Sbjct: 812 TPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 233/494 (47%), Gaps = 40/494 (8%)
Query: 88 RHREAMELF---EILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPD 144
R +EA LF L +E DC S + +++ V L +++ I GF D
Sbjct: 73 RTQEAKRLFLNIHRLGMEMDC-----SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDD 127
Query: 145 LYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWV 204
+ + ++ ++K D RK+F +M ER+VV+W T+I G + E LF+ M
Sbjct: 128 VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQN 187
Query: 205 EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED 264
E S TFA + A G+ G Q+H+ +K G+ V+ +LI++Y KCG++
Sbjct: 188 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK 247
Query: 265 AQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
A+ FD+ K+ V WNS+I+GYA +G EAL ++ MR + ++ + + VI++C
Sbjct: 248 ARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH-RKNVISWNA 383
L L +Q H ++V++GF D TAL+ YSK M DA +F + NV+SW A
Sbjct: 308 LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTA 367
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA---------------CSYSGL 428
+I+G+ + E+A+ +F +M R+ V PN T+ +L+A +Y
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERS 427
Query: 429 SERGWEIFYSMSRDHKVKPRA-----------MHYACMIELLGREGLLDEA---FALIRR 474
S G + + + KV+ A + ++ M+ + G + A F + +
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 475 APFEPTKNMWVALLTAC-RMHGNLELGK-FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLK 532
+P + + ++L C + ++ GK F + LC LL +Y G ++
Sbjct: 488 GGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIE 547
Query: 533 EAAGVLQTLKRKGL 546
A V + + K L
Sbjct: 548 SAEEVFKRQREKDL 561
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%)
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
+A FD+ P + + S++ G++ G ++EA ++L + G ++D S V+++
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
L +Q H ++ GF D+ T+LVD Y K +D R VFD M +NV++W
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
LI+GY + ++ + +F +M E PN TF A L + G+ RG ++
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV 216
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/606 (35%), Positives = 346/606 (57%), Gaps = 34/606 (5%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDA------- 164
T+ ++ C ++ + +++ +++ G + DLY+ ++ M+V+ G + DA
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 165 ------------------------RKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFL 200
+KLF ++P +DVVSW +I G ++G+Y EA LF
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG 260
M T T+V A A G I++GRQ+H G G + + ALID+YSKCG
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
+E A F+++P K + WN++I GY +EAL ++ EM SG + T+ ++
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 321 ICVRLASLEHAKQAHAALVRH--GFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV 378
C L +++ + H + + G + T+L+D Y+K G +E A VF+ + K++
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 379 ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 438
SWNA+I G+ HG+ + + +F +M + + P+ +TF+ +LSACS+SG+ + G IF +
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 495
Query: 439 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE 498
M++D+K+ P+ HY CMI+LLG GL EA +I EP +W +LL AC+MHGN+E
Sbjct: 496 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 555
Query: 499 LGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVK 558
LG+ AE L +++P +YV+L NIY S+G+ E A L KG++ +P C+ IE+
Sbjct: 556 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 615
Query: 559 KQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEE-EQRLQQYHSE 617
H F+ GDK H + +EIY ++E+ + + G++ + +L +++EE ++ ++HSE
Sbjct: 616 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSE 675
Query: 618 KLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATC 677
KLAIAFGLI+T T L I + RVC +CH A KLI+ + REI+ RD +RFHHFR+ C
Sbjct: 676 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 735
Query: 678 SCGDYW 683
SC DYW
Sbjct: 736 SCNDYW 741
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 224/490 (45%), Gaps = 76/490 (15%)
Query: 115 ALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVL---LMHVKCGLMLDARKLFGDM 171
+L++ C L+S+R + MI G Y +++++ ++ + A +F +
Sbjct: 38 SLLHNCKTLQSLRIIHA---QMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
E +++ W T+ G S D A L++ M S TF ++++ A + G+
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
QIH LK+G D +V +LI MY + G +EDA FD+ P + V + ++I GYA G
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 292 YSE-------------------------------EALSIYLEMRDSGAKIDHFTISIVIR 320
Y E EAL ++ +M + + D T+ V+
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
C + S+E +Q H + HGFGS++ AL+D YSK G +E A +F+R+ K+VIS
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG-WEIFYSM 439
WN LI GY + ++A+ +F++MLR PN VT L++L AC++ G + G W Y
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 440 SR--------------------------DHKVKPRAMH-----YACMIELLGREGLLDEA 468
R H+V +H + MI G D +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 469 FAL---IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL---YEMDPGKLCNYVMLL 522
F L +R+ +P +V LL+AC G L+LG+ + Y+M P KL +Y ++
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP-KLEHYGCMI 513
Query: 523 NIYNSSGKLK 532
++ SG K
Sbjct: 514 DLLGHSGLFK 523
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/598 (35%), Positives = 340/598 (56%), Gaps = 17/598 (2%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A+ LF + GD +S Y L+ V R++ +++ ++I +G + +
Sbjct: 167 KAVGLFSGMLASGD--KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETG 224
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ M+VKCG ++ A+++F M + V+ ++ G +G +A LF+ + E +
Sbjct: 225 IVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWD 284
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
S F+ +++A A L + +G+QIH+C K+G+ + V L+D Y KC S E A AF
Sbjct: 285 SFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQ 344
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI-DHFTISIVIRICVRLASLE 329
++ E V W++II+GY EEA+ + +R A I + FT + + + C LA
Sbjct: 345 EIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCN 404
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
Q HA ++ +AL+ YSK G ++DA VF+ M ++++W A I+G+
Sbjct: 405 IGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHA 464
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 449
+G +A+++FE+M+ + PN VTF+AVL+ACS++GL E+G +M R + V P
Sbjct: 465 YYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTI 524
Query: 450 MHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYE 509
HY CMI++ R GLLDEA ++ PFEP W L+ C H NLELG+ A E+L +
Sbjct: 525 DHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQ 584
Query: 510 MDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDK 569
+DP YV+ N+Y +GK +EAA +++ + + L+ +C+WI+ K + H F+ GDK
Sbjct: 585 LDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDK 644
Query: 570 SHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQQYHSEKLAIAFGLI--- 626
H QT+EIY+K+ E G++ E +M ++ E ++L HSE+LAIAFGLI
Sbjct: 645 HHPQTQEIYEKLKEF------DGFM-EGDMFQCNMTERREQLLD-HSERLAIAFGLISVH 696
Query: 627 -NTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
N P P+++ + R C DCH K +++VTG EIV+RD+ RFHHF+ CSC DYW
Sbjct: 697 GNAP--APIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/508 (27%), Positives = 234/508 (46%), Gaps = 51/508 (10%)
Query: 79 QIEKLGLCN--RHREAMELFEIL-ELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNY 135
Q+E L L + +HR+ E FE L E++ V + +Y L C LRS+ + + +
Sbjct: 49 QVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR 108
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
M P + + N VL M+ +C + DA KLF +M E + VS T+I + G +A
Sbjct: 109 MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKA 168
Query: 196 FGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDM 255
GLF M + S + T++++ + GRQIH+ ++ G+ ++ + +++M
Sbjct: 169 VGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNM 228
Query: 256 YSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTI 315
Y KCG + A+ FDQM K V ++ GY G + +AL +++++ G + D F
Sbjct: 229 YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 316 SIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHR 375
S+V++ C L L KQ HA + + G S++ T LVDFY K E A F +
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Query: 376 KNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV-IPNHVTFLAVLSACS---------- 424
N +SW+A+I+GY Q E+A++ F+ + + I N T+ ++ ACS
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 425 -----------------------YS--GLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 459
YS G + E+F SM P + + I
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-----NPDIVAWTAFISGH 463
Query: 460 GREGLLDEAFALIRR---APFEPTKNMWVALLTACRMHGNLELGKFAAEKL---YEMDPG 513
G EA L + +P ++A+LTAC G +E GK + + Y + P
Sbjct: 464 AYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAP- 522
Query: 514 KLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
+ +Y +++IY SG L EA ++ +
Sbjct: 523 TIDHYDCMIDIYARSGLLDEALKFMKNM 550
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/570 (35%), Positives = 342/570 (60%), Gaps = 3/570 (0%)
Query: 116 LVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERD 175
++ +C ++ K +I E D+ ++N ++ + KCG + AR++F M ER
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 176 VVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHS 235
+VSW T+IG + SEA +FL M E T ++++ A +++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 236 CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEE 295
++K + + +V AL+D+Y+KCG I+DA F+ M +K++V W+S++AGY + EE
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 296 ALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVD 355
AL +Y + + + FT+S VI C LA+L KQ HA + + GFGS++ ++ VD
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 356 FYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVT 415
Y+K G + ++ +F + KN+ WN +I+G+ H + ++ + +FE+M ++ + PN VT
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 416 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRA 475
F ++LS C ++GL E G F M + + P +HY+CM+++LGR GLL EA+ LI+
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 476 PFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAA 535
PF+PT ++W +LL +CR++ NLEL + AAEKL+E++P N+V+L NIY ++ + +E A
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 536 GVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIK 595
+ L+ ++ + +WI++K + H F G+ H + +EI +D ++ + + GY
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546
Query: 596 ENEMLLPDVD--EEEQRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLI 653
E L DV+ ++E+ L Q HSEKLA+ FGL+ P+ +P++I + R+C DCH +K
Sbjct: 547 SVEHELHDVEIGKKEELLMQ-HSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAA 605
Query: 654 AMVTGREIVVRDASRFHHFRNATCSCGDYW 683
+M T R I+VRD +RFHHF + CSCGD+W
Sbjct: 606 SMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 81/177 (45%), Gaps = 2/177 (1%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T +++ C L ++ K++ + SGF ++++ + + M+ KCG + ++ +F ++
Sbjct: 265 TLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEV 324
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
E+++ W T+I G E LF M + TF++++ GL++ GR
Sbjct: 325 QEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGR 384
Query: 232 QIHSCA-LKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP-EKTTVGWNSIIAG 286
+ G+ + ++D+ + G + +A +P + T W S++A
Sbjct: 385 RFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/607 (36%), Positives = 333/607 (54%), Gaps = 11/607 (1%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP 143
GL + L E E+ + T+ LR K++ + G
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
D+++ M+ K L DARKLF ++PER++ +W I V G EA F
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF---- 197
Query: 204 VEFN--DG--RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKC 259
+EF DG S TF + A + + +G Q+H L+ G D V LID Y KC
Sbjct: 198 IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC 257
Query: 260 GSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVI 319
I ++ F +M K V W S++A Y + E+A +YL R + F IS V+
Sbjct: 258 KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 320 RICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVI 379
C +A LE + HA V+ I +ALVD Y K G +ED+ FD M KN++
Sbjct: 318 SACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLV 377
Query: 380 SWNALIAGYGNHGQGEQAIQMFEQMLRERV--IPNHVTFLAVLSACSYSGLSERGWEIFY 437
+ N+LI GY + GQ + A+ +FE+M PN++TF+++LSACS +G E G +IF
Sbjct: 378 TRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD 437
Query: 438 SMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNL 497
SM + ++P A HY+C++++LGR G+++ A+ I++ P +PT ++W AL ACRMHG
Sbjct: 438 SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKP 497
Query: 498 ELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEV 557
+LG AAE L+++DP N+V+L N + ++G+ EA V + LK G++ +WI V
Sbjct: 498 QLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITV 557
Query: 558 KKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQ-QYHS 616
K Q HAF D+SH KEI + ++ +E+ GY + ++ L D++EEE+ + +HS
Sbjct: 558 KNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHS 617
Query: 617 EKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNAT 676
EKLA+AFGL++ P P++IT+ R+CGDCH+ K ++ REI+VRD +RFH F++
Sbjct: 618 EKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGI 677
Query: 677 CSCGDYW 683
CSC DYW
Sbjct: 678 CSCKDYW 684
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 190/407 (46%), Gaps = 13/407 (3%)
Query: 143 PDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFM 202
P ++ N ++ M+ K AR + P R+VVSW ++I GL +G +S A F M
Sbjct: 40 PPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEM 99
Query: 203 WVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSI 262
E TF +A A L L G+QIH+ A+K G D FV C+ DMY K
Sbjct: 100 RREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159
Query: 263 EDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC 322
+DA+ FD++PE+ WN+ I+ G EA+ ++E R + T + C
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 323 VRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWN 382
L Q H ++R GF +D+ L+DFY K ++ + +F M KN +SW
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 383 ALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 442
+L+A Y + + E+A ++ + ++ V + +VLSAC+ E G I ++ +
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI-HAHAVK 338
Query: 443 HKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE--PTKNMWV--ALLTACRMHGNLE 498
V+ + ++++ G+ G ++++ F+ P KN+ +L+ G ++
Sbjct: 339 ACVERTIFVGSALVDMYGKCGCIEDS-----EQAFDEMPEKNLVTRNSLIGGYAHQGQVD 393
Query: 499 LGKFAAEKLYEMDPGKLCNY---VMLLNIYNSSGKLKEAAGVLQTLK 542
+ E++ G NY V LL+ + +G ++ + +++
Sbjct: 394 MALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 99/199 (49%), Gaps = 1/199 (0%)
Query: 227 IQVGRQIHSCALK-MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIA 285
+++GR +H+ +K + F+A LI+MYSK E A+ P + V W S+I+
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81
Query: 286 GYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGS 345
G A +G+ AL + EMR G + FT + L KQ HA V+ G
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
D+ + D Y K +DAR +FD + +N+ +WNA I+ G+ +AI+ F +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 406 RERVIPNHVTFLAVLSACS 424
R PN +TF A L+ACS
Sbjct: 202 RIDGHPNSITFCAFLNACS 220
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 314 TISIVIRICVRLASLEHAKQAHAALVR--HGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
+ ++++ + +S+ + HA +V+ +AN L++ YSK E AR V
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANY-LINMYSKLDHPESARLVLR 66
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 431
+NV+SW +LI+G +G A+ F +M RE V+PN TF A + L
Sbjct: 67 LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVT 126
Query: 432 GWEI 435
G +I
Sbjct: 127 GKQI 130
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/581 (35%), Positives = 344/581 (59%), Gaps = 11/581 (1%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY+ L+ C S+ +V +++ +G + D ++ +++ M+ G + ARK+F
Sbjct: 79 TYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT 138
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAG----LGLI 227
+R + W + L +G E GL+ M + T+ +++A + +
Sbjct: 139 RKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHL 198
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
G++IH+ + G ++ L+DMY++ G ++ A F MP + V W+++IA Y
Sbjct: 199 MKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACY 258
Query: 288 ALHGYSEEALSIYLEM----RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
A +G + EAL + EM +DS + T+ V++ C LA+LE K H ++R G
Sbjct: 259 AKNGKAFEALRTFREMMRETKDSSP--NSVTMVSVLQACASLAALEQGKLIHGYILRRGL 316
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQ 403
S + +ALV Y + G++E + VFDRMH ++V+SWN+LI+ YG HG G++AIQ+FE+
Sbjct: 317 DSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEE 376
Query: 404 MLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 463
ML P VTF++VL ACS+ GL E G +F +M RDH +KP+ HYACM++LLGR
Sbjct: 377 MLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRAN 436
Query: 464 LLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLN 523
LDEA +++ EP +W +LL +CR+HGN+EL + A+ +L+ ++P NYV+L +
Sbjct: 437 RLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLAD 496
Query: 524 IYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDE 583
IY + E V + L+ +GL+ LP W+EV+++ ++F+ D+ + ++I+ + +
Sbjct: 497 IYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVK 556
Query: 584 ILDEISRHGYIKENEMLLPDVD-EEEQRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRV 642
+ +++ GYI + + +L +++ EE++R+ HSEKLA+AFGLINT P++IT+ R+
Sbjct: 557 LAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRL 616
Query: 643 CGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
C DCH K I+ +EI+VRD +RFH F+N CSCGDYW
Sbjct: 617 CEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA+ F + E + + T +++ C L ++ K + Y++ G + L +++
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ M+ +CG + +++F M +RDVVSW ++I G +A +F M
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPT 385
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALK-MGVGGDSFVACALIDMYSKCGSI-EDAQCA 268
TF +++ A + GL++ G+++ + G+ ++D+ + + E A+
Sbjct: 386 PVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMV 445
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEA 296
D E W S++ +HG E A
Sbjct: 446 QDMRTEPGPKVWGSLLGSCRIHGNVELA 473
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 229/620 (36%), Positives = 334/620 (53%), Gaps = 56/620 (9%)
Query: 117 VNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLM---LD-ARKLFGDMP 172
+N C R+IR + ++ I SG D +L L LD A K+F MP
Sbjct: 30 INNC---RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLF---MWVEFNDGRSRTFATMVRASAGLGLIQV 229
+R+ SW T+I G +S + + LF M EF + TF ++++A A G IQ
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQC---------------------- 267
G+QIH ALK G GGD FV L+ MY CG ++DA+
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 268 -----------------------AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR 304
FD+M +++ V WN++I+GY+L+G+ ++A+ ++ EM+
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 305 DSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRME 364
+ ++ T+ V+ RL SLE + H G D V +AL+D YSK G +E
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 365 DARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS 424
A HVF+R+ R+NVI+W+A+I G+ HGQ AI F +M + V P+ V ++ +L+ACS
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS 386
Query: 425 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMW 484
+ GL E G F M ++PR HY CM++LLGR GLLDEA I P +P +W
Sbjct: 387 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIW 446
Query: 485 VALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
ALL ACRM GN+E+GK A L +M P YV L N+Y S G E + + +K K
Sbjct: 447 KALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
Query: 545 GLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDV 604
+R P C+ I++ H F+ D SH + KEI + EI D++ GY +L ++
Sbjct: 507 DIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNL 566
Query: 605 DEEE-QRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVV 663
+EE+ + + YHSEK+A AFGLI+T P++I + R+C DCH++IKLI+ V R+I V
Sbjct: 567 EEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITV 626
Query: 664 RDASRFHHFRNATCSCGDYW 683
RD RFHHF++ +CSC DYW
Sbjct: 627 RDRKRFHHFQDGSCSCMDYW 646
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 58/348 (16%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLF--- 168
T+ +++ C I+ K++ + GF D ++M+ ++ M+V CG M DAR LF
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 169 --------------------------------GD----------MPERDVVSWMTVIGGL 186
GD M +R VVSW T+I G
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249
Query: 187 VDSGDYSEAFGLFLFMWVEFNDGRSR----TFATMVRASAGLGLIQVGRQIHSCALKMGV 242
+G + +A +F E G R T +++ A + LG +++G +H A G+
Sbjct: 250 SLNGFFKDAVEVFR----EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI 305
Query: 243 GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLE 302
D + ALIDMYSKCG IE A F+++P + + W+++I G+A+HG + +A+ + +
Sbjct: 306 RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCK 365
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWG 361
MR +G + ++ C +E ++ + +V G I +VD + G
Sbjct: 366 MRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSG 425
Query: 362 RMEDARHVFDRMHRK-NVISWNALIAG---YGNHGQGEQAIQMFEQML 405
+++A M K + + W AL+ GN G++ + M+
Sbjct: 426 LLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMV 473
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/583 (37%), Positives = 333/583 (57%), Gaps = 11/583 (1%)
Query: 107 DVGASTYDALVNVCVGLRSIRGV--KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDA 164
D S+ A V CV + R + K V + GF D + + L H C A
Sbjct: 31 DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVC-----A 85
Query: 165 RKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR--TFATMVRASA 222
KLF +MPERD+VSW ++I G G + F + M + R TF +M+ A
Sbjct: 86 EKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACV 145
Query: 223 GLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNS 282
G + GR IH +K GV + V A I+ Y K G + + F+ + K V WN+
Sbjct: 146 YGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNT 205
Query: 283 IIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
+I + +G +E+ L+ + R G + D T V+R C + + A+ H ++ G
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFE 402
F + TAL+D YSK GR+ED+ VF + + ++W A++A Y HG G AI+ FE
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE 325
Query: 403 QMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 462
M+ + P+HVTF +L+ACS+SGL E G F +MS+ +++ PR HY+CM++LLGR
Sbjct: 326 LMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRS 385
Query: 463 GLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLL 522
GLL +A+ LI+ P EP+ +W ALL ACR++ + +LG AAE+L+E++P NYVML
Sbjct: 386 GLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLS 445
Query: 523 NIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVD 582
NIY++SG K+A+ + +K+KGL C++IE + H F+ GD SH ++++I +K+
Sbjct: 446 NIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLK 505
Query: 583 EILDEI-SRHGYIKENEMLLPDVDEE-EQRLQQYHSEKLAIAFGLINTPDWTPLQITQGH 640
EI ++ S GY + E +L DV E+ ++ + HSEK+A+AFGL+ P+ I +
Sbjct: 506 EIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNL 565
Query: 641 RVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
R+CGDCH K I+++ R I++RD+ RFHHF + +CSC DYW
Sbjct: 566 RICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/627 (36%), Positives = 349/627 (55%), Gaps = 14/627 (2%)
Query: 67 QIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSI 126
+I +P T + I AM LF+ + G +V T L+ C +
Sbjct: 99 EIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLG--FEVDGFTLSGLIAACCDRVDL 156
Query: 127 RGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPE-RDVVSWMTVIGG 185
+K++ + +S GF+ + N + + K GL+ +A +F M E RD VSW ++I
Sbjct: 157 --IKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVA 214
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD 245
+ ++A L+ M + T A+++ A L + GRQ H +K G +
Sbjct: 215 YGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN 274
Query: 246 SFVACALIDMYSKCGSIE---DAQCAFDQMPEKTTVGWNSIIAGYALHG-YSEEALSIYL 301
S V LID YSKCG + D++ F ++ V WN++I+GY+++ SEEA+ +
Sbjct: 275 SHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFR 334
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD-IVANTALVDFYSKW 360
+M+ G + D + V C L+S KQ H ++ S+ I N AL+ Y K
Sbjct: 335 QMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKS 394
Query: 361 GRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVL 420
G ++DAR VFDRM N +S+N +I GY HG G +A+ ++++ML + PN +TF+AVL
Sbjct: 395 GNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVL 454
Query: 421 SACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPT 480
SAC++ G + G E F +M K++P A HY+CMI+LLGR G L+EA I P++P
Sbjct: 455 SACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPG 514
Query: 481 KNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQT 540
W ALL ACR H N+ L + AA +L M P YVML N+Y + K +E A V ++
Sbjct: 515 SVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKS 574
Query: 541 LKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEML 600
++ K +R P C+WIEVKK+ H F+ D SH +E+ + ++E++ ++ + GY+ + +
Sbjct: 575 MRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWA 634
Query: 601 LPDVDEEEQRLQQ----YHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMV 656
+ DE + ++ +HSEKLA+AFGL++T D L + + R+CGDCHNAIK ++ V
Sbjct: 635 MVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAV 694
Query: 657 TGREIVVRDASRFHHFRNATCSCGDYW 683
GREI+VRD RFH F++ CSCGDYW
Sbjct: 695 AGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 223/479 (46%), Gaps = 47/479 (9%)
Query: 108 VGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKL 167
V +STY L N V L S G S EP+++ N ++ + K + AR+L
Sbjct: 39 VASSTY--LSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQL 96
Query: 168 FGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
F ++P+ D VS+ T+I G D+ + A LF M + T + ++ +A +
Sbjct: 97 FDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLI--AACCDRV 154
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE-KTTVGWNSIIAG 286
+ +Q+H ++ G S V A + YSK G + +A F M E + V WNS+I
Sbjct: 155 DLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVA 214
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
Y H +AL++Y EM G KID FT++ V+ L L +Q H L++ GF +
Sbjct: 215 YGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN 274
Query: 347 IVANTALVDFYSKWG---RMEDARHVFDRMHRKNVISWNALIAGYG-NHGQGEQAIQMFE 402
+ L+DFYSK G M D+ VF + +++ WN +I+GY N E+A++ F
Sbjct: 275 SHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFR 334
Query: 403 QMLRERVIPNHVTFLAVLSACS----------YSGLSERG-------------WEIFYSM 439
QM R P+ +F+ V SACS GL+ + ++Y
Sbjct: 335 QMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKS 394
Query: 440 SR--------DHKVKPRAMHYACMIELLGREGLLDEAFALIRR---APFEPTKNMWVALL 488
D + A+ + CMI+ + G EA L +R + P K +VA+L
Sbjct: 395 GNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVL 454
Query: 489 TACRMHGNLELGK---FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
+AC G ++ G+ ++ ++++P + +Y ++++ +GKL+EA + + K
Sbjct: 455 SACAHCGKVDEGQEYFNTMKETFKIEP-EAEHYSCMIDLLGRAGKLEEAERFIDAMPYK 512
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/459 (39%), Positives = 291/459 (63%), Gaps = 2/459 (0%)
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAG 286
+++G IHS ++ G G +V +L+ +Y+ CG + A FD+MPEK V WNS+I G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
+A +G EEAL++Y EM G K D FTI ++ C ++ +L K+ H +++ G +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM-L 405
+ ++ L+D Y++ GR+E+A+ +FD M KN +SW +LI G +G G++AI++F+ M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
E ++P +TF+ +L ACS+ G+ + G+E F M ++K++PR H+ CM++LL R G +
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIY 525
+A+ I+ P +P +W LL AC +HG+ +L +FA ++ +++P +YV+L N+Y
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 303
Query: 526 NSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEIL 585
S + + + + + R G++ +P + +EV + H FL GDKSH Q+ IY K+ E+
Sbjct: 304 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 363
Query: 586 DEISRHGYIKENEMLLPDVDEEE-QRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCG 644
+ GY+ + + DV+EEE + YHSEK+AIAF LI+TP+ +P+ + + RVC
Sbjct: 364 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 423
Query: 645 DCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
DCH AIKL++ V REIVVRD SRFHHF+N +CSC DYW
Sbjct: 424 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 156/313 (49%), Gaps = 27/313 (8%)
Query: 123 LRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTV 182
+ +R + + + +I SGF +Y+ N +L ++ CG + A K+F MPE+D+V+W +V
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 183 IGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGV 242
I G ++G EA L+ M + T +++ A A +G + +G+++H +K+G+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 243 GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLE 302
+ + L+D+Y++CG +E+A+ FD+M +K +V W S+I G A++G+ +EA+ ++
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 303 MRDSGAKID-HFTISIVIRICVRLASLEHAKQAHAALVRHGF------------GSDIVA 349
M + + T ++ C +H +V+ GF I
Sbjct: 181 MESTEGLLPCEITFVGILYAC-----------SHCGMVKEGFEYFRRMREEYKIEPRIEH 229
Query: 350 NTALVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
+VD ++ G+++ A M + NV+ W L+ HG + A F ++ +
Sbjct: 230 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQ 287
Query: 409 VIPNHVTFLAVLS 421
+ PNH +LS
Sbjct: 288 LEPNHSGDYVLLS 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 97/188 (51%), Gaps = 7/188 (3%)
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNAL 384
+A + + H+ ++R GFGS I +L+ Y+ G + A VFD+M K++++WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 385 IAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 444
I G+ +G+ E+A+ ++ +M + + P+ T +++LSAC+ G G + M +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 445 VKPRAMHYA-CMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
R +H + +++L R G ++EA L + W +L+ ++G GK A
Sbjct: 121 T--RNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---FGKEA 174
Query: 504 AEKLYEMD 511
E M+
Sbjct: 175 IELFKYME 182
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA+ L+ + +G D T +L++ C + ++ K+V YMI G +L+ N
Sbjct: 72 EALALYTEMNSKGIKPD--GFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
+L ++ +CG + +A+ LF +M +++ VSW ++I GL +G EA LF +M E +G
Sbjct: 130 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM--ESTEGL 187
Query: 211 ---SRTFATMVRASAGLGLIQVG-------RQIHSCALKMGVGGDSFVACALIDMYSKCG 260
TF ++ A + G+++ G R+ + ++ G ++D+ ++ G
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG------CMVDLLARAG 241
Query: 261 SIEDAQCAFDQMP-EKTTVGWNSIIAGYALHGYSEEA 296
++ A MP + V W +++ +HG S+ A
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/609 (35%), Positives = 339/609 (55%), Gaps = 40/609 (6%)
Query: 111 STYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
S ++L+N+ K VF+ M+ D+ N ++ +H++ G M A F
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVR----DISSWNAMIALHMQVGQMDLAMAQFEQ 237
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR-TFATMVRASAGLGLIQV 229
M ERD+V+W ++I G G A +F M + R T A+++ A A L + +
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQ------------------ 271
G+QIHS + G V ALI MYS+CG +E A+ +Q
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 272 ---------------MPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTIS 316
+ ++ V W ++I GY HG EA++++ M G + + +T++
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH-R 375
++ + LASL H KQ H + V+ G + + AL+ Y+K G + A FD +
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 376 KNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
++ +SW ++I HG E+A+++FE ML E + P+H+T++ V SAC+++GL +G +
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 436 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHG 495
F M K+ P HYACM++L GR GLL EA I + P EP W +LL+ACR+H
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Query: 496 NLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWI 555
N++LGK AAE+L ++P Y L N+Y++ GK +EAA + +++K ++ +WI
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Query: 556 EVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEE-EQRLQQY 614
EVK + H F D +H + EIY + +I DEI + GY+ + +L D++EE ++++ ++
Sbjct: 658 EVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717
Query: 615 HSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRN 674
HSEKLAIAFGLI+TPD T L+I + RVC DCH AIK I+ + GREI+VRD +RFHHF++
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777
Query: 675 ATCSCGDYW 683
CSC DYW
Sbjct: 778 GFCSCRDYW 786
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 225/538 (41%), Gaps = 132/538 (24%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLF---------------------GDM--- 171
+I SG +Y+MN ++ ++ K G L ARKLF GDM
Sbjct: 40 VIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDST 99
Query: 172 -------PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGL 224
P+RD VSW T+I G + G Y +A + M E + T ++ + A
Sbjct: 100 CEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAAT 159
Query: 225 GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKC------------------------- 259
++ G+++HS +K+G+ G+ V+ +L++MY+KC
Sbjct: 160 RCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI 219
Query: 260 ------GSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM-RDSGAKIDH 312
G ++ A F+QM E+ V WNS+I+G+ GY AL I+ +M RDS D
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR 279
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFG-SDIVAN--------------------- 350
FT++ V+ C L L KQ H+ +V GF S IV N
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 351 -----------TALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQ 399
TAL+D Y K G M A+++F + ++V++W A+I GY HG +AI
Sbjct: 340 RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAIN 399
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI---------FYSMSRDH------- 443
+F M+ PN T A+LS S G +I YS+S +
Sbjct: 400 LFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYA 459
Query: 444 ---------------KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE---PTKNMWV 485
+ + + + MI L + G +EA L E P +V
Sbjct: 460 KAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYV 519
Query: 486 ALLTACRMHGNLELGKFAAEKLYEMDP--GKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
+ +AC G + G+ + + ++D L +Y +++++ +G L+EA ++ +
Sbjct: 520 GVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 149/302 (49%), Gaps = 8/302 (2%)
Query: 246 SFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRD 305
+F ++ YSK G ++ FDQ+P++ +V W ++I GY G +A+ + +M
Sbjct: 80 AFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK 139
Query: 306 SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMED 365
G + FT++ V+ +E K+ H+ +V+ G ++ + +L++ Y+K G
Sbjct: 140 EGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 366 ARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSY 425
A+ VFDRM +++ SWNA+IA + GQ + A+ FEQM ER I VT+ +++S +
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM-AERDI---VTWNSMISGFNQ 255
Query: 426 SGLSERGWEIFYSMSRDHKVKPRAMHYACMIEL---LGREGLLDEAFALIRRAPFEPTKN 482
G R +IF M RD + P A ++ L + + + + I F+ +
Sbjct: 256 RGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI 315
Query: 483 MWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLK 542
+ AL++ G +E + E+ D K+ + LL+ Y G + +A + +LK
Sbjct: 316 VLNALISMYSRCGGVETARRLIEQRGTKDL-KIEGFTALLDGYIKLGDMNQAKNIFVSLK 374
Query: 543 RK 544
+
Sbjct: 375 DR 376
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 314/522 (60%), Gaps = 2/522 (0%)
Query: 164 ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAG 223
AR LF M E D+V + ++ G + E F LF+ + + + TF ++++A A
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 224 LGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSI 283
++ GRQ+H ++K+G+ + +V LI+MY++C ++ A+C FD++ E V +N++
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I GYA EALS++ EM+ K + T+ V+ C L SL+ K H +H F
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQ 403
+ NTAL+D ++K G ++DA +F++M K+ +W+A+I Y NHG+ E+++ MFE+
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 404 MLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 463
M E V P+ +TFL +L+ACS++G E G + F M + P HY M++LL R G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 464 LLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLN 523
L++A+ I + P PT +W LL AC H NL+L + +E+++E+D +YV+L N
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSN 441
Query: 524 IYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDE 583
+Y + K + + + +K + +P C+ IEV H F GD + T ++++ +DE
Sbjct: 442 LYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDE 501
Query: 584 ILDEISRHGYIKENEMLL-PDVDEEEQRLQ-QYHSEKLAIAFGLINTPDWTPLQITQGHR 641
++ E+ GY+ + M++ +++++E+ + +YHSEKLAI FGL+NTP T +++ + R
Sbjct: 502 MVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLR 561
Query: 642 VCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
VC DCHNA KLI+++ GR++V+RD RFHHF + CSCGD+W
Sbjct: 562 VCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 6/240 (2%)
Query: 54 EYVDRKMPVLDDAQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTY 113
E VD V D +I++P + I NR EA+ LF E++G T
Sbjct: 178 EDVDSARCVFD--RIVEPCVVCYNAMITGYARRNRPNEALSLFR--EMQGKYLKPNEITL 233
Query: 114 DALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPE 173
++++ C L S+ K + Y F + + ++ M KCG + DA +F M
Sbjct: 234 LSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRY 293
Query: 174 RDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQI 233
+D +W +I + G ++ +F M E TF ++ A + G ++ GR+
Sbjct: 294 KDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKY 353
Query: 234 HSCAL-KMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP-EKTTVGWNSIIAGYALHG 291
S + K G+ +++D+ S+ G++EDA D++P T + W ++A + H
Sbjct: 354 FSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 332/606 (54%), Gaps = 34/606 (5%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ L+ + S+ + + + S D+++ N ++ + CG + A K+F +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
E+DVVSW ++I G V G +A LF M E T ++ A A + ++ GR
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD--------------------- 270
Q+ S + V + +A A++DMY+KCGSIEDA+ FD
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 271 ----------QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR-DSGAKIDHFTISIVI 319
MP+K V WN++I+ Y +G EAL ++ E++ K++ T+ +
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 320 RICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVI 379
C ++ +LE + H+ + +HG + +AL+ YSK G +E +R VF+ + +++V
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 380 SWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 439
W+A+I G HG G +A+ MF +M V PN VTF V ACS++GL + +F+ M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 440 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLEL 499
++ + P HYAC++++LGR G L++A I P P+ ++W ALL AC++H NL L
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552
Query: 500 GKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKK 559
+ A +L E++P +V+L NIY GK + + + + ++ GL+ P C+ IE+
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 612
Query: 560 QPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQ--QYHSE 617
H FL GD +H ++++Y K+ E+++++ +GY E +L ++EEE + Q HSE
Sbjct: 613 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSE 672
Query: 618 KLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATC 677
KLAI +GLI+T +++ + RVCGDCH+ KLI+ + REI+VRD RFHHFRN C
Sbjct: 673 KLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQC 732
Query: 678 SCGDYW 683
SC D+W
Sbjct: 733 SCNDFW 738
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 227/476 (47%), Gaps = 57/476 (11%)
Query: 111 STYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGL--MLDARKLF 168
S + +L+ CV LR + K+ +MI +G D Y +++ M + ARK+F
Sbjct: 31 SRHISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVF 87
Query: 169 GDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR-TFATMVRASAGLGLI 227
++P+ + +W T+I D + FL M E ++ TF +++A+A + +
Sbjct: 88 DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
+G+ +H A+K VG D FVA +LI Y CG ++ A F + EK V WNS+I G+
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDI 347
G ++AL ++ +M K H T+ V+ C ++ +LE +Q + + + ++
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMH-------------------------------RK 376
A++D Y+K G +EDA+ +FD M +K
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQM-LRERVIPNHVTFLAVLSACSYSGLSERG-WE 434
++++WNALI+ Y +G+ +A+ +F ++ L++ + N +T ++ LSAC+ G E G W
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW- 386
Query: 435 IFYSMSRDHKVKPRAMHYACMIELLGREGLLD---EAFALI-RRAPFEPTKNMWVALLTA 490
+S + H ++ + +I + + G L+ E F + +R F +W A++
Sbjct: 387 -IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF-----VWSAMIGG 440
Query: 491 CRMHGNLELGKFAAEKLYEMDPGKL-CNYVMLLNIY---NSSGKLKEAAGVLQTLK 542
MHG G A + Y+M + N V N++ + +G + EA + ++
Sbjct: 441 LAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 161/339 (47%), Gaps = 40/339 (11%)
Query: 91 EAMELFEILELEGDCADVGAS--TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMM 148
+A+ELF+ +E E DV AS T +++ C +R++ ++V +Y+ + +L +
Sbjct: 215 KALELFKKMESE----DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDY---------------- 192
N +L M+ KCG + DA++LF M E+D V+W T++ G S DY
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 193 ---------------SEAFGLFLFMWVEFNDGRSR-TFATMVRASAGLGLIQVGRQIHSC 236
+EA +F + ++ N ++ T + + A A +G +++GR IHS
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 237 ALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEA 296
K G+ + V ALI MYSKCG +E ++ F+ + ++ W+++I G A+HG EA
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 297 LSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQA-HAALVRHGFGSDIVANTALVD 355
+ ++ +M+++ K + T + V C ++ A+ H +G + +VD
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 356 FYSKWGRMEDARHVFDRMHRKNVIS-WNALIAGYGNHGQ 393
+ G +E A + M S W AL+ H
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 111/243 (45%), Gaps = 11/243 (4%)
Query: 75 GLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFN 134
L S E+ G N EA+ +F L+L+ + + T + ++ C + ++ + + +
Sbjct: 334 ALISAYEQNGKPN---EALIVFHELQLQKN-MKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 135 YMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSE 194
Y+ G + ++ + ++ M+ KCG + +R++F + +RDV W +IGGL G +E
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449
Query: 195 AFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQI-HSCALKMGVGGDSFVACALI 253
A +F M TF + A + GL+ + H G+ + ++
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509
Query: 254 DMYSKCGSIEDAQCAFDQMP-EKTTVGWNSIIAGYALHG---YSEEALSIYLEM--RDSG 307
D+ + G +E A + MP +T W +++ +H +E A + LE+ R+ G
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569
Query: 308 AKI 310
A +
Sbjct: 570 AHV 572
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/600 (34%), Positives = 338/600 (56%), Gaps = 14/600 (2%)
Query: 86 CNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDL 145
C A++LF+ + + ++ A+VN C + +++F M D
Sbjct: 110 CGDMNTAVKLFD------EMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPV----KDT 159
Query: 146 YMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVE 205
N ++ +++ G + DA KLF MP ++V+SW T+I GL + EA LF M
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 206 FNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDA 265
SR F ++ A A +G Q+H +K+G + +V+ +LI Y+ C I D+
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 266 QCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRL 325
+ FD+ + W ++++GY+L+ E+ALSI+ M + + T + + C L
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL 339
Query: 326 ASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALI 385
+L+ K+ H V+ G +D +LV YS G + DA VF ++ +K+++SWN++I
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII 399
Query: 386 AGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD-HK 444
G HG+G+ A +F QM+R P+ +TF +LSACS+ G E+G ++FY MS +
Sbjct: 400 VGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH 459
Query: 445 VKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAA 504
+ + HY CM+++LGR G L EA LI R +P + +W+ALL+ACRMH +++ G+ AA
Sbjct: 460 IDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAA 519
Query: 505 EKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAF 564
++ +D YV+L NIY S+G+ + + +K+ G+ P +W+ ++ + H F
Sbjct: 520 AAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEF 579
Query: 565 LCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDV-DEEEQRLQQYHSEKLAIAF 623
GD+ H IY+K++ + +++ GY + L DV DE+++ + YHSE+LAIAF
Sbjct: 580 FSGDQPHCS--RIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAF 637
Query: 624 GLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
GLINT + + + + + RVC DCH IKLI+ V GREIV+RD RFHHF+N TCSCGDYW
Sbjct: 638 GLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 208/466 (44%), Gaps = 56/466 (12%)
Query: 124 RSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVI 183
R I ++VFN + S P + + +++ + + ++DA LF +MP RDVVSW ++I
Sbjct: 49 RRIDEAREVFNQVPS----PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMI 104
Query: 184 GGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI-QVGRQIHSCALKMGV 242
G V+ GD + A LF E + ++ MV G + Q R + +K
Sbjct: 105 SGCVECGDMNTAVKLF----DEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK--- 157
Query: 243 GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLE 302
D+ +++ Y + G ++DA F QMP K + W ++I G + S EAL ++
Sbjct: 158 --DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
M K + VI C + Q H +++ GF + + +L+ FY+ R
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKR 275
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
+ D+R VFD + V W AL++GY + + E A+ +F MLR ++PN TF + L++
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNS 335
Query: 423 CSYSGLSERGWE---------------------IFYSMSRDHK---------VKPRAMHY 452
CS G + G E + YS S + K + +
Sbjct: 336 CSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSW 395
Query: 453 ACMIELLGREGLLDEAFAL---IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYE 509
+I + G AF + + R EP + + LL+AC G LE G+ + Y
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGR---KLFYY 452
Query: 510 MDPG------KLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRML 549
M G K+ +Y +++I GKLKEA +++ + K M+
Sbjct: 453 MSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMV 498
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/579 (34%), Positives = 341/579 (58%), Gaps = 9/579 (1%)
Query: 110 ASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFG 169
++ Y+A+V G R ++ +++V ++I +G+ ++ +++ + + LF
Sbjct: 9 SAAYEAIVRA--GPR-VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFL 65
Query: 170 DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQV 229
+P D + +VI + M + TF +++++ A L +++
Sbjct: 66 SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI 125
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
G+ +H A+ G G D++V AL+ YSKCG +E A+ FD+MPEK+ V WNS+++G+
Sbjct: 126 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 185
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
+G ++EA+ ++ +MR+SG + D T ++ C + ++ H ++ G ++
Sbjct: 186 NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKL 245
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE-R 408
TAL++ YS+ G + AR VFD+M NV +W A+I+ YG HG G+QA+++F +M +
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCG 305
Query: 409 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
IPN+VTF+AVLSAC+++GL E G ++ M++ +++ P H+ CM+++LGR G LDEA
Sbjct: 306 PIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEA 365
Query: 469 FALIRR--APFEPTK-NMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIY 525
+ I + A + T +W A+L AC+MH N +LG A++L ++P ++VML NIY
Sbjct: 366 YKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIY 425
Query: 526 NSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEIL 585
SGK E + + + R LR + IEV+ + + F GD+SH +T EIY+ ++ ++
Sbjct: 426 ALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLI 485
Query: 586 DEISRHGYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIAFGLINTPDWTPLQITQGHRVCG 644
GY +E ++ V+EEE+ +YHSEKLA+AFGL+ T D + I + R+C
Sbjct: 486 SRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICE 544
Query: 645 DCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
DCH+A K I++V+ R+I VRD RFHHF+N +CSC DYW
Sbjct: 545 DCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/582 (36%), Positives = 342/582 (58%), Gaps = 7/582 (1%)
Query: 109 GASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLF 168
G+ T + ++ C L+ + +++ + G + ++ + N ++ ++ + G + + RK+F
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 169 GDMPERDVVSWMTVIGGLVDSG-DYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
MPE D VSW ++IG L S EA FL TF++++ A + L
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG 533
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK-TTVGWNSIIAG 286
++G+QIH ALK + ++ ALI Y KCG ++ + F +M E+ V WNS+I+G
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
Y + +AL + M +G ++D F + V+ +A+LE + HA VR SD
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM-L 405
+V +ALVD YSK GR++ A F+ M +N SWN++I+GY HGQGE+A+++FE M L
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKL 713
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
+ P+HVTF+ VLSACS++GL E G++ F SMS + + PR H++CM ++LGR G L
Sbjct: 714 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGEL 773
Query: 466 DEAFALIRRAPFEPTKNMWVALLTA-CRMHG-NLELGKFAAEKLYEMDPGKLCNYVMLLN 523
D+ I + P +P +W +L A CR +G ELGK AAE L++++P NYV+L N
Sbjct: 774 DKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833
Query: 524 IYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDE 583
+Y + G+ ++ + +K ++ +W+ +K H F+ GDKSH IY+K+ E
Sbjct: 834 MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKE 893
Query: 584 ILDEISRHGYIKENEMLLPDVDEE-EQRLQQYHSEKLAIAFGLINTPDWT-PLQITQGHR 641
+ ++ GY+ + L D+++E ++ + YHSEKLA+AF L T P++I + R
Sbjct: 894 LNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLR 953
Query: 642 VCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
VCGDCH+A K I+ + GR+I++RD++RFHHF++ CSC D+W
Sbjct: 954 VCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 149/296 (50%), Gaps = 9/296 (3%)
Query: 115 ALVNVCVGLRSIRGVKKVF-NYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPE 173
+ V CVG R G + F + + + + D+Y+ N ++ +++ G + ARK+F +MP
Sbjct: 8 SFVQSCVGHR---GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 174 RDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQV--GR 231
R+ VSW ++ G +G++ EA M E F +++RA +G + + GR
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKC-GSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
QIH K+ D+ V+ LI MY KC GS+ A CAF + K +V WNSII+ Y+
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA--SLEHAKQAHAALVRHGFGSDIV 348
G A I+ M+ G++ +T ++ L + +Q + + G +D+
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
+ LV ++K G + AR VF++M +N ++ N L+ G GE+A ++F M
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 184/411 (44%), Gaps = 13/411 (3%)
Query: 89 HREAMELFEILELEGDCADVGASTYDALVNVCVGLR--SIRGVKKVFNYMISSGFEPDLY 146
R A +F ++ +G + T+ +LV L +R ++++ + SG DL+
Sbjct: 187 QRSAFRIFSSMQYDG--SRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+ + ++ K G + ARK+F M R+ V+ ++ GLV EA LF+ M
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSM 303
Query: 207 NDGRSRTFATMVRASAGLGL-----IQVGRQIHSCALKMG-VGGDSFVACALIDMYSKCG 260
D ++ ++ + L ++ GR++H + G V + L++MY+KCG
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
SI DA+ F M +K +V WNS+I G +G EA+ Y MR FT+ +
Sbjct: 364 SIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLS 423
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
C L + +Q H ++ G ++ + AL+ Y++ G + + R +F M + +S
Sbjct: 424 SCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS 483
Query: 381 WNALIAGYGNHGQG-EQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 439
WN++I + +A+ F R N +TF +VLSA S E G +I + +
Sbjct: 484 WNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGL 542
Query: 440 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTA 490
+ + + A +I G+ G +D + R W ++++
Sbjct: 543 ALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
R HS K + D ++ LI+ Y + G A+ FD+MP + V W I++GY+
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE--HAKQAHAALVRHGFGSDI 347
+G +EAL +M G + + V+R C + S+ +Q H + + + D
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 348 VANTALVDFYSK-WGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
V + L+ Y K G + A F + KN +SWN++I+ Y G A ++F M
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 407 ERVIPNHVTFLA-VLSACSYS 426
+ P TF + V +ACS +
Sbjct: 200 DGSRPTEYTFGSLVTTACSLT 220
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 331 AKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGN 390
A+ H+ L ++ D+ L++ Y + G AR VFD M +N +SW +++GY
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 391 HGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSG 427
+G+ ++A+ M++E + N F++VL AC G
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/604 (34%), Positives = 335/604 (55%), Gaps = 7/604 (1%)
Query: 84 GLCNRH--REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGF 141
G N H E ++LF L + + T+ ++ C S + + + ++ GF
Sbjct: 85 GFVNNHLFHETLDLF--LSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGF 142
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLF 201
D+ M +L ++ G + DA KLF ++P+R VV+W + G SG + EA LF
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 202 MWVEFNDGRSRTFATMV-RASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG 260
M VE F V A +G + G I +M + +SFV L+++Y+KCG
Sbjct: 203 M-VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCG 261
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
+E A+ FD M EK V W+++I GYA + + +E + ++L+M K D F+I +
Sbjct: 262 KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLS 321
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
C L +L+ + + + RH F +++ AL+D Y+K G M VF M K+++
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVI 381
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 440
NA I+G +G + + +F Q + + P+ TFL +L C ++GL + G F ++S
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441
Query: 441 RDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELG 500
+ +K HY CM++L GR G+LD+A+ LI P P +W ALL+ CR+ + +L
Sbjct: 442 CVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLA 501
Query: 501 KFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQ 560
+ ++L ++P NYV L NIY+ G+ EAA V + +KG++ +P +WIE++ +
Sbjct: 502 ETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGK 561
Query: 561 PHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEE-QRLQQYHSEKL 619
H FL DKSH + +IY K++++ +E+ G++ E + DV+EEE +R+ YHSEKL
Sbjct: 562 VHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKL 621
Query: 620 AIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSC 679
A+A GLI+T +++ + RVCGDCH +KLI+ +T REIVVRD +RFH F N +CSC
Sbjct: 622 AVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSC 681
Query: 680 GDYW 683
DYW
Sbjct: 682 NDYW 685
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 160/357 (44%), Gaps = 42/357 (11%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
+QIH + + D+F+ L+ + + F +NS+I G+ +
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
E L ++L +R G + FT +V++ C R +S + H+ +V+ GF D+ A
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 351 TALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI 410
T+L+ YS GR+ DA +FD + ++V++W AL +GY G+ +AI +F++M+ V
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 411 PNHVTFLAVLSACSYSGLSERG-WEIFY---------SMSR------------------- 441
P+ + VLSAC + G + G W + Y S R
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 442 -DHKVKPRAMHYACMIE-----LLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHG 495
D V+ + ++ MI+ +EG+ E F + + +P + V L++C G
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGI--ELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 496 NLELGKFAAEKLYEMDPGKLCNYVM---LLNIYNSSGKLKEAAGVLQTLKRKGLRML 549
L+LG++ + + L N M L+++Y G + V + +K K + ++
Sbjct: 328 ALDLGEWGISLIDRHEF--LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/591 (35%), Positives = 320/591 (54%), Gaps = 36/591 (6%)
Query: 129 VKKVFNYMISSGFEPDLYMMNRVL---LMHVKCGLMLDARKLFGDMPERDVVSWMTVIGG 185
+K++ M+ +G D Y + + L + + A+ +F D W +I G
Sbjct: 30 LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD 245
S + + L+ M + TF ++++A + L + QIH+ K+G D
Sbjct: 90 FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEND 149
Query: 246 SFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA----------------- 288
+ +LI+ Y+ G+ + A FD++PE V WNS+I GY
Sbjct: 150 VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 289 ---------LHGY-----SEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQA 334
+ GY ++EAL ++ EM++S + D+ +++ + C +L +LE K
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 335 HAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQG 394
H+ L + D V L+D Y+K G ME+A VF + +K+V +W ALI+GY HG G
Sbjct: 270 HSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHG 329
Query: 395 EQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYAC 454
+AI F +M + + PN +TF AVL+ACSY+GL E G IFYSM RD+ +KP HY C
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 455 MIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGK 514
+++LLGR GLLDEA I+ P +P +W ALL ACR+H N+ELG+ E L +DP
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYH 449
Query: 515 LCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQT 574
YV NI+ K +AA + +K +G+ +P C+ I ++ H FL GD+SH +
Sbjct: 450 GGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEI 509
Query: 575 KEIYQKVDEILDEISRHGYIKENEMLLPDV--DEEEQRLQQYHSEKLAIAFGLINTPDWT 632
++I K + ++ +GY+ E E +L D+ D+E + + HSEKLAI +GLI T T
Sbjct: 510 EKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGT 569
Query: 633 PLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
++I + RVC DCH KLI+ + R+IV+RD +RFHHFR+ CSCGDYW
Sbjct: 570 IIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 148/311 (47%), Gaps = 2/311 (0%)
Query: 97 EILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHV 156
E ++ +G VN + ++ G K+ + + EPD N V+ +V
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 157 KCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFAT 216
K G M A LF M E++ +SW T+I G V + EA LF M + + + A
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 217 MVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKT 276
+ A A LG ++ G+ IHS K + DS + C LIDMY+KCG +E+A F + +K+
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 277 TVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHA 336
W ++I+GYA HG+ EA+S ++EM+ G K + T + V+ C +E K
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372
Query: 337 ALVR-HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-NVISWNALIAGYGNHGQG 394
++ R + I +VD + G +++A+ M K N + W AL+ H
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 432
Query: 395 EQAIQMFEQML 405
E ++ E ++
Sbjct: 433 ELGEEIGEILI 443
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/611 (34%), Positives = 346/611 (56%), Gaps = 43/611 (7%)
Query: 111 STYDALVNV---CVGLRSI-RGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARK 166
S +ALV+V C S+ +KVF+ ++ E D ++ +VK G +
Sbjct: 185 SVSNALVSVYSKCASSPSLLHSARKVFDEIL----EKDERSWTTMMTGYVKNGYFDLGEE 240
Query: 167 LFGDMPER-DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLG 225
L M + +V++ +I G V+ G Y EA + M + T+ +++RA A G
Sbjct: 241 LLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAG 300
Query: 226 LIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIA 285
L+Q+G+Q+H+ L+ F +L+ +Y KCG ++A+ F++MP K V WN++++
Sbjct: 301 LLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLS 359
Query: 286 GY-------------------------------ALHGYSEEALSIYLEMRDSGAKIDHFT 314
GY A +G+ EE L ++ M+ G + +
Sbjct: 360 GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA 419
Query: 315 ISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH 374
S I+ C L + + +Q HA L++ GF S + A AL+ Y+K G +E+AR VF M
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 375 RKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE 434
+ +SWNALIA G HG G +A+ ++E+ML++ + P+ +T L VL+ACS++GL ++G +
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Query: 435 IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMH 494
F SM +++ P A HYA +I+LL R G +A ++I PF+PT +W ALL+ CR+H
Sbjct: 540 YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599
Query: 495 GNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTW 554
GN+ELG AA+KL+ + P Y++L N++ ++G+ +E A V + ++ +G++ C+W
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSW 659
Query: 555 IEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDV--DEEEQRLQ 612
IE++ Q H FL D SH + + +Y + ++ E+ R GY+ + +L DV D ++ +
Sbjct: 660 IEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDML 719
Query: 613 QYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHF 672
HSEK+A+AFGL+ P T ++I + R CGDCHN + ++ V R+I++RD RFHHF
Sbjct: 720 TTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHF 779
Query: 673 RNATCSCGDYW 683
RN CSCG++W
Sbjct: 780 RNGECSCGNFW 790
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 241/516 (46%), Gaps = 90/516 (17%)
Query: 110 ASTYDALVNVCVGLR--SIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKL 167
A+ Y A + +C+ LR S++ + V +I+ GF+P +++NR++ ++ K + AR+L
Sbjct: 12 ANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL 71
Query: 168 FGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF----------------LFMWVEFNDGRS 211
F ++ E D ++ T++ G SGD + A G+F + + NDG S
Sbjct: 72 FDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS 131
Query: 212 R-----------------TFATMVRASAGLGLIQVGR----QIHSCALKMGVGGDSFVAC 250
TFA+++ AGL L+ Q H+ ALK G G + V+
Sbjct: 132 AINLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSN 188
Query: 251 ALIDMYSKCGS----IEDAQCAFDQMPEKTTVGW-------------------------- 280
AL+ +YSKC S + A+ FD++ EK W
Sbjct: 189 ALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN 248
Query: 281 ------NSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQA 334
N++I+GY G+ +EAL + M SG ++D FT VIR C L+ KQ
Sbjct: 249 MKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 335 HAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQG 394
HA ++R S N+ LV Y K G+ ++AR +F++M K+++SWNAL++GY + G
Sbjct: 309 HAYVLRREDFSFHFDNS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 395 EQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYAC 454
+A +F++M + ++ +++ ++S + +G E G ++F M R+ +P ++
Sbjct: 368 GEAKLIFKEMKEKNIL----SWMIMISGLAENGFGEEGLKLFSCMKRE-GFEPCDYAFSG 422
Query: 455 MIE---LLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMD 511
I+ +LG + A + + F+ + + AL+T G +E + + +D
Sbjct: 423 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD 482
Query: 512 PGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
++ L+ G EA V + + +KG+R
Sbjct: 483 S---VSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/547 (36%), Positives = 317/547 (57%), Gaps = 15/547 (2%)
Query: 143 PDLYMMNRVLLMHVKC--GLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFL 200
PD + R ++H C G + +AR++F +M ER V++W T++ G + +A +F
Sbjct: 168 PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD 227
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVAC-ALIDMYSKC 259
M + ++ +M+ +G +Q GR + L + +AC A+I +
Sbjct: 228 VM----PEKTEVSWTSML-----MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQK 278
Query: 260 GSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVI 319
G I A+ FD M E+ W ++I + +G+ EAL +++ M+ G + T+ ++
Sbjct: 279 GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISIL 338
Query: 320 RICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVI 379
+C LASL H KQ HA LVR F D+ + L+ Y K G + ++ +FDR K++I
Sbjct: 339 SVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII 398
Query: 380 SWNALIAGYGNHGQGEQAIQMFEQM-LRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 438
WN++I+GY +HG GE+A+++F +M L PN VTF+A LSACSY+G+ E G +I+ S
Sbjct: 399 MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYES 458
Query: 439 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE 498
M VKP HYACM+++LGR G +EA +I EP +W +LL ACR H L+
Sbjct: 459 MESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLD 518
Query: 499 LGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVK 558
+ +F A+KL E++P Y++L N+Y S G+ + A + + +K + +R P C+W EV+
Sbjct: 519 VAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVE 578
Query: 559 KQPHAFLCGD-KSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQ-RLQQYHS 616
+ HAF G SH + + I + +DE+ + GY + L DVDEEE+ +YHS
Sbjct: 579 NKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHS 638
Query: 617 EKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNAT 676
E+LA+A+ L+ + P+++ + RVC DCH AIK+I+ V REI++RDA+RFHHFRN
Sbjct: 639 ERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGE 698
Query: 677 CSCGDYW 683
CSC DYW
Sbjct: 699 CSCKDYW 705
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 219/508 (43%), Gaps = 70/508 (13%)
Query: 74 PGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVF 133
P +I L + EA +LF+ C S+++++V R +K+F
Sbjct: 18 PTANVRITHLSRIGKIHEARKLFD------SCDSKSISSWNSMVAGYFANLMPRDARKLF 71
Query: 134 NYMISSGFEPDLYMM--NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGD 191
+ M PD ++ N ++ ++K G + +ARK+F MPER+VVSW ++ G V +G
Sbjct: 72 DEM------PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 192 YSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCAL-KMGVGGDSFVAC 250
A LF M + ++ M+ +G +Q GR +C L +M D+
Sbjct: 126 VDVAESLFWKM----PEKNKVSWTVML-----IGFLQDGRIDDACKLYEMIPDKDNIART 176
Query: 251 ALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI 310
++I K G +++A+ FD+M E++ + W +++ GY + ++A I+ D +
Sbjct: 177 SMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF----DVMPEK 232
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
+ + ++ V+ +E A++ + ++A A++ + G + AR VF
Sbjct: 233 TEVSWTSMLMGYVQNGRIEDAEELFEVMPV----KPVIACNAMISGLGQKGEIAKARRVF 288
Query: 371 DRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 430
D M +N SW +I + +G +A+ +F M ++ V P T +++LS C+
Sbjct: 289 DSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLH 348
Query: 431 RGWEIFYSMSR------------------------------DHKVKPRAMHYACMIELLG 460
G ++ + R D + + +I
Sbjct: 349 HGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYA 408
Query: 461 REGLLDEAFALIRRAPF----EPTKNMWVALLTACRMHGNLELG---KFAAEKLYEMDPG 513
GL +EA + P +P + +VA L+AC G +E G + E ++ + P
Sbjct: 409 SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP- 467
Query: 514 KLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
+Y ++++ +G+ EA ++ ++
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMIDSM 495
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 129/323 (39%), Gaps = 81/323 (25%)
Query: 253 IDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDH 312
I S+ G I +A+ FD K+ WNS++AGY + +A ++ EM D
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR------ 77
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
+I++ LV Y K G +++AR VFD
Sbjct: 78 ---------------------------------NIISWNGLVSGYMKNGEIDEARKVFDL 104
Query: 373 MHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVL------SACSY- 425
M +NV+SW AL+ GY ++G+ + A +F +M + + V + L AC
Sbjct: 105 MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY 164
Query: 426 --------------------SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
G + EIF MS + + + M+ G+ +
Sbjct: 165 EMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS-----ERSVITWTTMVTGYGQNNRV 219
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGK---LCNYVMLL 522
D+A + P E T+ W ++L +G +E AE+L+E+ P K CN ++
Sbjct: 220 DDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIE----DAEELFEVMPVKPVIACN--AMI 272
Query: 523 NIYNSSGKLKEAAGVLQTLKRKG 545
+ G++ +A V ++K +
Sbjct: 273 SGLGQKGEIAKARRVFDSMKERN 295
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA++LF +++ +G T ++++VC L S+ K+V ++ F+ D+Y+ +
Sbjct: 314 EALDLFILMQKQG--VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASV 371
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ M++KCG ++ ++ +F P +D++ W ++I G G EA +F M + +
Sbjct: 372 LMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 211 SR-TFATMVRASAGLGLIQVGRQIH-SCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
+ TF + A + G+++ G +I+ S GV + ++DM + G +A
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEM 491
Query: 269 FDQMP-EKTTVGWNSIIAGYALHG 291
D M E W S++ H
Sbjct: 492 IDSMTVEPDAAVWGSLLGACRTHS 515
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 338 LVRHGFGSDIVANTALVDF--YSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGE 395
L+R + + I TA V S+ G++ +AR +FD K++ SWN+++AGY +
Sbjct: 6 LLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR 65
Query: 396 QAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 455
A ++F++M +I ++ ++S +G + ++F M + V + +
Sbjct: 66 DARKLFDEMPDRNII----SWNGLVSGYMKNGEIDEARKVFDLMPERNVVS-----WTAL 116
Query: 456 IELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGK 514
++ G +D A +L + P E K W +L G ++ A KLYEM P K
Sbjct: 117 VKGYVHNGKVDVAESLFWKMP-EKNKVSWTVMLIGFLQDGRID----DACKLYEMIPDK 170
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/598 (34%), Positives = 329/598 (55%), Gaps = 29/598 (4%)
Query: 112 TYDALVNVCVGLRSIRGVKKV-FNYMISSGFEPDLYMMNRVL------------------ 152
+ DAL +C + S + V V F +++ F PD + R+L
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 402
Query: 153 --LMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
M+ K G M ++R++ MP RDVV+W +IGG + D +A F M VE G
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE---GV 459
Query: 211 SRTFATMVRA-SAGL---GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
S + T+V SA L L++ G+ +H+ + G D V +LI MY+KCG + +Q
Sbjct: 460 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 519
Query: 267 CAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA 326
F+ + + + WN+++A A HG+ EE L + +MR G +D F+ S + +LA
Sbjct: 520 DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLA 579
Query: 327 SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIA 386
LE +Q H V+ GF D A D YSK G + + + +++ SWN LI+
Sbjct: 580 VLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILIS 639
Query: 387 GYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 446
G HG E+ F +ML + P HVTF+++L+ACS+ GL ++G + ++RD ++
Sbjct: 640 ALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLE 699
Query: 447 PRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEK 506
P H C+I+LLGR G L EA I + P +P +W +LL +C++HGNL+ G+ AAE
Sbjct: 700 PAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAEN 759
Query: 507 LYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLC 566
L +++P YV+ N++ ++G+ ++ V + + K ++ C+W+++K + +F
Sbjct: 760 LSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGI 819
Query: 567 GDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQQY-HSEKLAIAFGL 625
GD++H QT EIY K+++I I GY+ + L D DEE++ + HSE+LA+A+ L
Sbjct: 820 GDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 879
Query: 626 INTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
++TP+ + ++I + R+C DCH+ K ++ V GR IV+RD RFHHF CSC DYW
Sbjct: 880 MSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 168/344 (48%), Gaps = 2/344 (0%)
Query: 91 EAMELFEILE-LEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMN 149
E E+ +I + + G+ ++ +++ C L+ +++ ++ SG E L + N
Sbjct: 140 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 199
Query: 150 RVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDG 209
++ M G + A +F M ERD +SW ++ +G E+F +F M ++
Sbjct: 200 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 259
Query: 210 RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
S T +T++ + + GR IH +KMG V L+ MY+ G +A F
Sbjct: 260 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 319
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
QMP K + WNS++A + G S +AL + M SG +++ T + + C E
Sbjct: 320 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 379
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
+ H +V G + + ALV Y K G M ++R V +M R++V++WNALI GY
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSG-LSERG 432
++A+ F+ M E V N++T ++VLSAC G L ERG
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 483
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 195/391 (49%), Gaps = 21/391 (5%)
Query: 47 RPKPKKTEYVDRKMPVLDDAQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCA 106
R KP + ++ MPV ++ S + S I ++GL + E ME F +
Sbjct: 7 RVKPAR--HLFDIMPVRNEV-----SWNTMMSGIVRVGL---YLEGMEFFRKM------C 50
Query: 107 DVG----ASTYDALVNVCVGLRSI-RGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLM 161
D+G + +LV C S+ R +V ++ SG D+Y+ +L ++ GL+
Sbjct: 51 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 110
Query: 162 LDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRAS 221
+RK+F +MP+R+VVSW +++ G D G+ E ++ M E + + ++ +
Sbjct: 111 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 170
Query: 222 AGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWN 281
L +GRQI +K G+ V +LI M G+++ A FDQM E+ T+ WN
Sbjct: 171 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 230
Query: 282 SIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH 341
SI A YA +G+ EE+ I+ MR +++ T+S ++ + + + + H +V+
Sbjct: 231 SIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 290
Query: 342 GFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMF 401
GF S + L+ Y+ GR +A VF +M K++ISWN+L+A + N G+ A+ +
Sbjct: 291 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 350
Query: 402 EQMLRERVIPNHVTFLAVLSACSYSGLSERG 432
M+ N+VTF + L+AC E+G
Sbjct: 351 CSMISSGKSVNYVTFTSALAACFTPDFFEKG 381
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 1/273 (0%)
Query: 154 MHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRT 213
M+ K G + AR LF MP R+ VSW T++ G+V G Y E F M S
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 214 FATMVRASAGLG-LIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
A++V A G + + G Q+H K G+ D +V+ A++ +Y G + ++ F++M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 273 PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAK 332
P++ V W S++ GY+ G EE + IY MR G + ++S+VI C L +
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 333 QAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHG 392
Q +V+ G S + +L+ G ++ A ++FD+M ++ ISWN++ A Y +G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 393 QGEQAIQMFEQMLRERVIPNHVTFLAVLSACSY 425
E++ ++F M R N T +LS +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 357 YSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTF 416
Y+K+GR++ ARH+FD M +N +SWN +++G G + ++ F +M + P+
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 417 LAVLSACSYSG 427
++++AC SG
Sbjct: 62 ASLVTACGRSG 72
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 318/572 (55%), Gaps = 46/572 (8%)
Query: 154 MHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF-------------- 199
M+ CG + AR +F +M RDVV+W T+I G EAF LF
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 200 -------------------LFMWVEFNDGRSRT--FATMVRASAGLGLIQVGRQIHSCAL 238
++ ++ ND R T +V AG G + + R+
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR--- 271
Query: 239 KMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALS 298
KM V + FV+ A++ YSKCG ++DAQ FDQ +K V W ++I+ Y Y +EAL
Sbjct: 272 KMSVR-NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALR 330
Query: 299 IYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYS 358
++ EM SG K D ++ VI C L L+ AK H+ + +G S++ N AL++ Y+
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA 390
Query: 359 KWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLA 418
K G ++ R VF++M R+NV+SW+++I HG+ A+ +F +M +E V PN VTF+
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 419 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE 478
VL CS+SGL E G +IF SM+ ++ + P+ HY CM++L GR LL EA +I P
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 510
Query: 479 PTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVL 538
+W +L++ACR+HG LELGKFAA+++ E++P V++ NIY + ++ +
Sbjct: 511 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIR 570
Query: 539 QTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENE 598
+ ++ K + + I+ + H FL GDK H Q+ EIY K+DE++ ++ GY+ +
Sbjct: 571 RVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCG 630
Query: 599 MLLPDVDEEEQR-LQQYHSEKLAIAFGLINTPDWTP------LQITQGHRVCGDCHNAIK 651
+L DV+EEE++ L +HSEKLA+ FGL+N ++I + RVC DCH K
Sbjct: 631 SVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFK 690
Query: 652 LIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
L++ V REI+VRD +RFH ++N CSC DYW
Sbjct: 691 LVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 127/283 (44%), Gaps = 10/283 (3%)
Query: 268 AFDQMPEKT-TVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA 326
F +P ++ +N + + + Y +R G ++D F+ +++ +++
Sbjct: 66 VFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVS 125
Query: 327 SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIA 386
+L + H + D T +D Y+ GR+ AR+VFD M ++V++WN +I
Sbjct: 126 ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 387 GYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 446
Y G ++A ++FE+M V+P+ + ++SAC +G + R Y ++ V+
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG-NMRYNRAIYEFLIENDVR 244
Query: 447 PRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWV--ALLTACRMHGNLELGKFAA 504
++ + G +D A R+ +N++V A+++ G L+ +
Sbjct: 245 MDTHLLTALVTMYAGAGCMDMAREFFRKM---SVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 505 EKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
++ + D L + +++ Y S +EA V + + G++
Sbjct: 302 DQTEKKD---LVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/566 (34%), Positives = 331/566 (58%), Gaps = 2/566 (0%)
Query: 120 CVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSW 179
C R I + V + + + F + N +L M+ KCG + A+ +F +M +R VVS+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 180 MTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALK 239
++I G G EA LF M E T ++ A L+ G+++H +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 240 MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSI 299
+G D FV+ AL+DMY+KCGS+++A+ F +M K + WN+II GY+ + Y+ EALS+
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485
Query: 300 Y-LEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYS 358
+ L + + D T++ V+ C L++ + ++ H ++R+G+ SD +LVD Y+
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 359 KWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLA 418
K G + A +FD + K+++SW +IAGYG HG G++AI +F QM + + + ++F++
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605
Query: 419 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE 478
+L ACS+SGL + GW F M + K++P HYAC++++L R G L +A+ I P
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665
Query: 479 PTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVL 538
P +W ALL CR+H +++L + AEK++E++P YV++ NIY + K ++ +
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725
Query: 539 QTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENE 598
+ + ++GLR P C+WIE+K + + F+ GD S+ +T+ I + ++ + GY +
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTK 785
Query: 599 MLLPDVDE-EEQRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVT 657
L D +E E++ HSEKLA+A G+I++ +++T+ RVCGDCH K ++ +T
Sbjct: 786 YALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLT 845
Query: 658 GREIVVRDASRFHHFRNATCSCGDYW 683
REIV+RD++RFH F++ CSC +W
Sbjct: 846 RREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 165/584 (28%), Positives = 275/584 (47%), Gaps = 69/584 (11%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ + LRS+ G +++ +++ SGF + N ++ ++K + ARK+F +M
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLG---LIQ 228
ERDV+SW ++I G V +G + +F+ M V G AT+V AG LI
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS---GIEIDLATIVSVFAGCADSRLIS 313
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
+GR +HS +K + L+DMYSKCG ++ A+ F +M +++ V + S+IAGYA
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
G + EA+ ++ EM + G D +T++ V+ C R L+ K+ H + + G DI
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 433
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE- 407
+ AL+D Y+K G M++A VF M K++ISWN +I GY + +A+ +F +L E
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 408 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR-------AMHYAC------ 454
R P+ T VL AC+ ++G EI + R+ R M+ C
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Query: 455 -----------------MIELLGREGLLDEAFAL---IRRAPFEPTKNMWVALLTACRMH 494
MI G G EA AL +R+A E + +V+LL AC
Sbjct: 554 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Query: 495 GNLELG-KFAAEKLYE--MDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPT 551
G ++ G +F +E ++P + +Y ++++ +G L +A ++ + + P
Sbjct: 614 GLVDEGWRFFNIMRHECKIEP-TVEHYACIVDMLARTGDLIKAYRFIENMP-----IPPD 667
Query: 552 CT-WIEVKKQPHAFLCGDKSHTQTK---EIYQKVDEILDEISRHGYIKENEMLLPDVDEE 607
T W A LCG + H K ++ +KV E+ E GY +L+ ++ E
Sbjct: 668 ATIW-------GALLCGCRIHHDVKLAEKVAEKVFEL--EPENTGYY----VLMANIYAE 714
Query: 608 EQRLQQYHSEKLAIA-FGLINTP--DWTPLQITQGHRVCGDCHN 648
++ +Q + I GL P W ++ V GD N
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSN 758
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 180/328 (54%), Gaps = 4/328 (1%)
Query: 107 DVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARK 166
D+ T +++ +C +S++ K+V N++ +GF D + +++ LM+ CG + +A +
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 167 LFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL 226
+F ++ + W ++ L SGD+S + GLF M + S TF+ + ++ + L
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAG 286
+ G Q+H LK G G + V +L+ Y K ++ A+ FD+M E+ + WNSII G
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV--RLASLEHAKQAHAALVRHGFG 344
Y +G +E+ LS++++M SG +ID TI V C RL SL + H+ V+ F
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGVKACFS 328
Query: 345 SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
+ L+D YSK G ++ A+ VF M ++V+S+ ++IAGY G +A+++FE+M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 405 LRERVIPNHVTFLAVLSACSYSGLSERG 432
E + P+ T AVL+ C+ L + G
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEG 416
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 137/254 (53%), Gaps = 14/254 (5%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA++LFE +E EG DV T A++N C R + K+V ++ + D+++ N
Sbjct: 380 EAVKLFEEMEEEGISPDV--YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN-DG 209
++ M+ KCG M +A +F +M +D++SW T+IGG + +EA LF + E
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 210 RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
RT A ++ A A L GR+IH ++ G D VA +L+DMY+KCG++ A F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
D + K V W +IAGY +HG+ +EA++++ +MR +G + D + ++ C
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC------- 610
Query: 330 HAKQAHAALVRHGF 343
+H+ LV G+
Sbjct: 611 ----SHSGLVDEGW 620
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/601 (35%), Positives = 334/601 (55%), Gaps = 13/601 (2%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP 143
G+C+ E +ELF + G D T ++++ C L R + + Y+I++GF
Sbjct: 276 GMCH---EGLELF--FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
D+ + N + M++ G +A KLF M +D+VSW T+I G + +A + M
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 204 VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIE 263
+ T A ++ A A LG + G ++H A+K + VA LI+MYSKC I+
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
A F +P K + W SIIAG L+ EAL I+L + + T++ + C
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACA 509
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
R+ +L K+ HA ++R G G D AL+D Y + GRM A F+ +K+V SWN
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNI 568
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
L+ GY GQG +++F++M++ RV P+ +TF+++L CS S + +G +++S D+
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL-MYFSKMEDY 627
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
V P HYAC+++LLGR G L EA I++ P P +W ALL ACR+H ++LG+ +
Sbjct: 628 GVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELS 687
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHA 563
A+ ++E+D + Y++L N+Y GK +E A V + +K GL + C+W+EVK + HA
Sbjct: 688 AQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHA 747
Query: 564 FLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQQY---HSEKLA 620
FL DK H QTKEI ++ +++S G K +E +DE E + HSE+ A
Sbjct: 748 FLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISES--SSMDETEISRDEIFCGHSERKA 805
Query: 621 IAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCG 680
IAFGLINT P+ +T+ +C +CH+ +K I+ REI VRDA FHHF++ CSCG
Sbjct: 806 IAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCG 865
Query: 681 D 681
D
Sbjct: 866 D 866
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 208/423 (49%), Gaps = 25/423 (5%)
Query: 84 GLC--NRHREAMELFEIL-ELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSG 140
GLC + EAM+L + EL V + ALV +C R+ KV++ +SS
Sbjct: 68 GLCANGKLEEAMKLLNSMQELR---VAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM 124
Query: 141 FEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF- 199
+ + N L M V+ G ++DA +FG M ER++ SW ++GG G + EA L+
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 200 LFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKC 259
+WV TF ++R G+ + G+++H ++ G D V ALI MY KC
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 260 GSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVI 319
G ++ A+ FD+MP + + WN++I+GY +G E L ++ MR D T++ VI
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 320 RICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVI 379
C L + HA ++ GF DI +L Y G +A +F RM RK+++
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 380 SWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 439
SW +I+GY + ++AI + M ++ V P+ +T AVLSAC+ G + G E+
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL---- 420
Query: 440 SRDHK--VKPRAMHYAC----MIELLGREGLLDEAFALIRRAPFEPTKNM--WVALLTAC 491
HK +K R + Y +I + + +D+A + P KN+ W +++
Sbjct: 421 ---HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI---PRKNVISWTSIIAGL 474
Query: 492 RMH 494
R++
Sbjct: 475 RLN 477
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 121/301 (40%), Gaps = 45/301 (14%)
Query: 286 GYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGS 345
G +G EEA+ + M++ +D ++R+C + E + ++ +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
+ A + + ++G + DA +VF +M +N+ SWN L+ GY G ++A+ ++ +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 406 -RERVIPNHVTFLAVLSACSYSGLSERGWEI----------------------------- 435
V P+ TF VL C RG E+
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 436 ------FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLT 489
F M R + AM + EGL E F +R +P ++++
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGL--ELFFAMRGLSVDPDLMTLTSVIS 305
Query: 490 ACRMHGNLELGK----FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
AC + G+ LG+ + + +D +CN L +Y ++G +EA + ++RK
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDIS-VCN--SLTQMYLNAGSWREAEKLFSRMERKD 362
Query: 546 L 546
+
Sbjct: 363 I 363
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 342/607 (56%), Gaps = 9/607 (1%)
Query: 79 QIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMIS 138
++ +L + E++ L+ + G D A ++ ++ C L +++ ++
Sbjct: 24 RLRELAYQSLFSESISLYRSMLRSGSSPD--AFSFPFILKSCASLSLPVSGQQLHCHVTK 81
Query: 139 SGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVS--WMTVIGGLVDSGDYSEAF 196
G E + +++ ++ M+ KCGL+ DARK+F + P+ +S + +I G + ++A
Sbjct: 82 GGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAA 141
Query: 197 GLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMY 256
+F M S T +V + +GR +H +K G+ + V + I MY
Sbjct: 142 YMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMY 201
Query: 257 SKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTIS 316
KCGS+E + FD+MP K + WN++I+GY+ +G + + L +Y +M+ SG D FT+
Sbjct: 202 MKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLV 261
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
V+ C L + + + + +GF ++ + A + Y++ G + AR VFD M K
Sbjct: 262 SVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK 321
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 436
+++SW A+I YG HG GE + +F+ M++ + P+ F+ VLSACS+SGL+++G E+F
Sbjct: 322 SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF 381
Query: 437 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGN 496
+M R++K++P HY+C+++LLGR G LDEA I P EP +W ALL AC++H N
Sbjct: 382 RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKN 441
Query: 497 LELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIE 556
+++ + A K+ E +P + YV++ NIY+ S + + ++ + R P +++E
Sbjct: 442 VDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVE 501
Query: 557 VKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQQYHS 616
K + H FL GD+SH QT+E+++ +DE+ + ++ + D EE + HS
Sbjct: 502 HKGRVHLFLAGDRSHEQTEEVHRMLDELETSV-----MELAGNMDCDRGEEVSSTTREHS 556
Query: 617 EKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNAT 676
E+LAIAFG++N+ T + + + RVC DCH +K ++ + R+ VVRDASRFH+F++
Sbjct: 557 ERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGV 616
Query: 677 CSCGDYW 683
CSC DYW
Sbjct: 617 CSCKDYW 623
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 130/294 (44%), Gaps = 48/294 (16%)
Query: 280 WNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALV 339
WN + A E++S+Y M SG+ D F+ +++ C L+ +Q H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 340 RHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS--WNALIAGYGNHGQGEQA 397
+ G ++ TAL+ Y K G + DAR VF+ + + +S +NALI+GY + + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 398 IQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIE 457
MF +M V + VT L ++ C+ + E W R++H C+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT---VPEYLW------------LGRSLHGQCV-- 183
Query: 458 LLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGK-LC 516
+G LD A++ N ++ + C G++E G+ +L++ P K L
Sbjct: 184 ----KGGLDSEVAVL---------NSFITMYMKC---GSVEAGR----RLFDEMPVKGLI 223
Query: 517 NYVMLLNIYNSSGKLKEAAGVLQTLKRKG--------LRMLPTCTWIEVKKQPH 562
+ +++ Y+ +G + + + +K G + +L +C + KK H
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGH 277
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/542 (36%), Positives = 312/542 (57%), Gaps = 5/542 (0%)
Query: 146 YMMNRVLLM-HVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWV 204
YM + +L+ +V+ G +++ARK+F +MP+R + +W +I GL+ E LF M
Sbjct: 25 YMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHG 84
Query: 205 EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED 264
T ++ SAGL + +G+QIH +K G+ D V +L MY + G ++D
Sbjct: 85 LGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQD 144
Query: 265 AQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
+ MP + V WN++I G A +G E L +Y M+ SG + + T V+ C
Sbjct: 145 GEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 204
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNAL 384
LA +Q HA ++ G S + ++L+ YSK G + DA F ++ + W+++
Sbjct: 205 LAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSM 264
Query: 385 IAGYGNHGQGEQAIQMFEQMLRERVIP-NHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
I+ YG HGQG++AI++F M + + N V FL +L ACS+SGL ++G E+F M +
Sbjct: 265 ISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKY 324
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
KP HY C+++LLGR G LD+A A+IR P + +W LL+AC +H N E+ +
Sbjct: 325 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 384
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHA 563
+++ ++DP YV+L N++ S+ + ++ + V ++++ K ++ +W E K + H
Sbjct: 385 FKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQ 444
Query: 564 FLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQR--LQQYHSEKLAI 621
F GD+S +++KEIY + E+ E+ GY + +L D+DEEE+ L Q HSEKLA+
Sbjct: 445 FKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQ-HSEKLAV 503
Query: 622 AFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGD 681
AF L+ P+ P++I + RVC DCH A K I+++ REI +RD SRFHHF N CSCGD
Sbjct: 504 AFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGD 563
Query: 682 YW 683
YW
Sbjct: 564 YW 565
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 170/364 (46%), Gaps = 7/364 (1%)
Query: 89 HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMM 148
+ E + LF E+ G T ++ + GLRS+ +++ Y I G E DL +
Sbjct: 72 NEEGLSLFR--EMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVN 129
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
+ + M+++ G + D + MP R++V+W T+I G +G L+ M +
Sbjct: 130 SSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR 189
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
TF T++ + + L + G+QIH+ A+K+G V +LI MYSKCG + DA A
Sbjct: 190 PNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKA 249
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRD-SGAKIDHFTISIVIRICVRLAS 327
F + ++ V W+S+I+ Y HG +EA+ ++ M + + +I+ ++ C
Sbjct: 250 FSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGL 309
Query: 328 LEHAKQAHAALV-RHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-NVISWNALI 385
+ + +V ++GF + T +VD + G ++ A + M K +++ W L+
Sbjct: 310 KDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLL 369
Query: 386 AGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 445
+ H E A ++F+++L ++ PN +L+ S R RD V
Sbjct: 370 SACNIHKNAEMAQRVFKEIL--QIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNV 427
Query: 446 KPRA 449
K A
Sbjct: 428 KKEA 431
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 315/544 (57%), Gaps = 10/544 (1%)
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLF 201
EPD + N +L +V+ A+ F MP +D SW T+I G G+ +A LF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 202 MWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGS 261
M +E N+ ++ M+ G ++ A GV A+I Y K
Sbjct: 181 M-MEKNE---VSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKK 232
Query: 262 IEDAQCAFDQMP-EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
+E A+ F M K V WN++I+GY + E+ L ++ M + G + + +S +
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
C L++L+ +Q H + + +D+ A T+L+ Y K G + DA +F+ M +K+V++
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 440
WNA+I+GY HG ++A+ +F +M+ ++ P+ +TF+AVL AC+++GL G F SM
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412
Query: 441 RDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELG 500
RD+KV+P+ HY CM++LLGR G L+EA LIR PF P ++ LL ACR+H N+EL
Sbjct: 413 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 472
Query: 501 KFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQ 560
+FAAEKL +++ YV L NIY S + ++ A V + +K + +P +WIE++ +
Sbjct: 473 EFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532
Query: 561 PHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEE-QRLQQYHSEKL 619
H F D+ H + I++K+ E+ ++ GY E E L +V+EE+ ++L +HSEKL
Sbjct: 533 VHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKL 592
Query: 620 AIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSC 679
A+AFG I P + +Q+ + R+CGDCH AIK I+ + REI+VRD +RFHHF++ +CSC
Sbjct: 593 AVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSC 652
Query: 680 GDYW 683
GDYW
Sbjct: 653 GDYW 656
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 29/298 (9%)
Query: 258 KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH-GYSEEALSIYLEMRDSGAKIDHFTIS 316
+ G I+ A F M K T+ WNS++ G + EA ++ E+ + D F+ +
Sbjct: 73 RSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEP----DTFSYN 128
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
I++ VR + E +A + R F NT ++ Y++ G ME AR +F M K
Sbjct: 129 IMLSCYVRNVNFE---KAQSFFDRMPFKDAASWNT-MITGYARRGEMEKARELFYSMMEK 184
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 436
N +SWNA+I+GY G E+A F +V P V + +A + + E+
Sbjct: 185 NEVSWNAMISGYIECGDLEKASHFF------KVAP--VRGVVAWTAMITGYMKAKKVELA 236
Query: 437 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR---RAPFEPTKNMWVALLTACRM 493
+M +D V + + MI ++ L R P + + L C
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 494 HGNLELGKFAAEKLYEM-DPGKLCNYVM----LLNIYNSSGKLKEAAGVLQTLKRKGL 546
L+LG+ +++++ LCN V L+++Y G+L +A + + +K+K +
Sbjct: 297 LSALQLGR----QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
+R + ++LF + EG +S + + C L +++ +++ + S D+
Sbjct: 263 SRPEDGLKLFRAMLEEG--IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVT 320
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+ ++ M+ KCG + DA KLF M ++DVV+W +I G G+ +A LF E
Sbjct: 321 ALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFR----EM 376
Query: 207 NDGRSR----TFATMVRASAGLGLIQVGRQIHSCAL---KMGVGGDSFVACALIDMYSKC 259
D + R TF ++ A GL+ +G + K+ D + ++D+ +
Sbjct: 377 IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYT--CMVDLLGRA 434
Query: 260 GSIEDAQCAFDQMP 273
G +E+A MP
Sbjct: 435 GKLEEALKLIRSMP 448
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 328/571 (57%), Gaps = 3/571 (0%)
Query: 114 DALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPE 173
D L++ +I+G++ + Y++ SG + N ++ + K L D+R+ F D P+
Sbjct: 20 DLLLSSARTRSTIKGLQ-LHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQ 78
Query: 174 RDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQI 233
+ +W ++I + + M + ++ A L +GR +
Sbjct: 79 KSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSV 138
Query: 234 HSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYS 293
H ++K G D FV +L+DMY+KCG I A+ FD+MP++ V W+ ++ GYA G +
Sbjct: 139 HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGEN 198
Query: 294 EEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTAL 353
EEAL ++ E ++ ++ S VI +C LE +Q H ++ F S ++L
Sbjct: 199 EEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSL 258
Query: 354 VDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNH 413
V YSK G E A VF+ + KN+ WNA++ Y H ++ I++F++M + PN
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 414 VTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 473
+TFL VL+ACS++GL + G F M ++ +++P HYA ++++LGR G L EA +I
Sbjct: 319 ITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVIT 377
Query: 474 RAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKE 533
P +PT+++W ALLT+C +H N EL FAA+K++E+ P ++ L N Y + G+ ++
Sbjct: 378 NMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFED 437
Query: 534 AAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGY 593
AA + L+ +G + +W+E + + H F G++ H ++KEIY+K+ E+ +E+ + GY
Sbjct: 438 AAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGY 497
Query: 594 IKENEMLLPDVD-EEEQRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKL 652
I + +L +VD +E+ + +YHSE+LAIAFGLI P P+++ + RVCGDCHNAIK
Sbjct: 498 IADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKF 557
Query: 653 IAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
+++ T R I+VRD +RFH F + CSC DYW
Sbjct: 558 MSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/650 (33%), Positives = 341/650 (52%), Gaps = 66/650 (10%)
Query: 90 REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMN 149
+EA +LF+ + ++ +++ LV+ + R I + VF M E ++
Sbjct: 65 KEARQLFD------EMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP----ERNVVSWT 114
Query: 150 RVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVE---- 205
++ +++ G++ +A LF MPER+ VSW + GGL+D G +A L+ M V+
Sbjct: 115 AMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVA 174
Query: 206 --------------------FNDGRSR---TFATMVRASAGLGLIQVGRQIH-------- 234
F++ R R T+ TM+ + V R++
Sbjct: 175 STNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE 234
Query: 235 ----SCALKMGVGG--------------DSFVAC-ALIDMYSKCGSIEDAQCAFDQMPEK 275
S L + G +AC A+I + + G I A+ FD M ++
Sbjct: 235 VSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDR 294
Query: 276 TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAH 335
W +I Y G+ EAL ++ +M+ G + ++ ++ +C LASL++ +Q H
Sbjct: 295 DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVH 354
Query: 336 AALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGE 395
A LVR F D+ + L+ Y K G + A+ VFDR K++I WN++I+GY +HG GE
Sbjct: 355 AHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGE 414
Query: 396 QAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 455
+A+++F +M +PN VT +A+L+ACSY+G E G EIF SM V P HY+C
Sbjct: 415 EALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCT 474
Query: 456 IELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKL 515
+++LGR G +D+A LI +P +W ALL AC+ H L+L + AA+KL+E +P
Sbjct: 475 VDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNA 534
Query: 516 CNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGD-KSHTQT 574
YV+L +I S K + A V + ++ + P C+WIEV K+ H F G K+H +
Sbjct: 535 GTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQ 594
Query: 575 KEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIAFGLINTPDWTP 633
I +++ + GY + +L DVDEEE+ HSE+LA+A+GL+ P+ P
Sbjct: 595 AMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVP 654
Query: 634 LQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
+++ + RVCGDCH AIKLI+ VT REI++RDA+RFHHF N CSC DYW
Sbjct: 655 IRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 103/478 (21%), Positives = 218/478 (45%), Gaps = 36/478 (7%)
Query: 72 STPGLCS-QIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVK 130
ST CS +I +L + EA + F+ L+ + +++++V+ + +
Sbjct: 15 STGVNCSFEISRLSRIGKINEARKFFDSLQFKA------IGSWNSIVSGYFSNGLPKEAR 68
Query: 131 KVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSG 190
++F+ M E ++ N ++ ++K ++++AR +F MPER+VVSW ++ G + G
Sbjct: 69 QLFDEM----SERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEG 124
Query: 191 DYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVAC 250
EA LF M + ++ M G I R+++ M D +
Sbjct: 125 MVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLYD----MMPVKDVVAST 176
Query: 251 ALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI 310
+I + G +++A+ FD+M E+ V W ++I GY + + A ++ E+ ++
Sbjct: 177 NMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEKTEV 235
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
++ + + R+ E + ++A A++ + + G + AR VF
Sbjct: 236 SWTSMLLGYTLSGRIEDAEEFFEVMPM-------KPVIACNAMIVGFGEVGEISKARRVF 288
Query: 371 DRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 430
D M ++ +W +I Y G +A+ +F QM ++ V P+ + +++LS C+ +
Sbjct: 289 DLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQ 348
Query: 431 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTA 490
G ++ + R + + ++ + + G L +A + R + MW ++++
Sbjct: 349 YGRQVHAHLVR-CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDII-MWNSIISG 406
Query: 491 CRMHGNLELGKFAAEKLYEM-DPGKLCNYVMLLNIYNS---SGKLKEAAGVLQTLKRK 544
HG LG+ A + +EM G + N V L+ I + +GKL+E + ++++ K
Sbjct: 407 YASHG---LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/583 (35%), Positives = 326/583 (55%), Gaps = 13/583 (2%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ + C L ++ ++ + + GFE + + N ++ M+ KCG + +A K+F +
Sbjct: 109 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFA--TMVRASAGLGLIQV 229
+R ++SW +I G V +G S+A F M R F ++++A + G+I
Sbjct: 169 VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 228
Query: 230 GRQIHSCALKMGV--GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
G+QIH ++ G + + +L+D+Y KCG + A+ AFDQ+ EKT + W+S+I GY
Sbjct: 229 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDI 347
A G EA+ ++ +++ ++ID F +S +I + A L KQ A V+ G +
Sbjct: 289 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 348
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE 407
++VD Y K G +++A F M K+VISW +I GYG HG G++++++F +MLR
Sbjct: 349 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 408
Query: 408 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 467
+ P+ V +LAVLSACS+SG+ + G E+F + H +KPR HYAC+++LLGR G L E
Sbjct: 409 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468
Query: 468 AFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNS 527
A LI P +P +W LL+ CR+HG++ELGK + L +D NYVM+ N+Y
Sbjct: 469 AKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQ 528
Query: 528 SGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDE 587
+G E + KGL+ +W+E++++ H F G+ SH T I + + E
Sbjct: 529 AGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERR 588
Query: 588 ISRH-GYIKENEMLLPDVDEE--EQRLQQYHSEKLAIAFGL----INTPDWTPLQITQGH 640
+ GY+ + L D+D+E E+ L+ HSEKLAI L +N T +++ +
Sbjct: 589 LREELGYVYGLKHELHDIDDESKEENLRA-HSEKLAIGLALATGGLNQKGKT-IRVFKNL 646
Query: 641 RVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
RVC DCH IK ++ +T VVRDA RFH F + CSCGDYW
Sbjct: 647 RVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 215/424 (50%), Gaps = 23/424 (5%)
Query: 131 KVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSG 190
+V Y++ SG +L N ++ M+ KC L A K+F MPER+VVSW ++ G V +G
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 191 DYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVAC 250
D + LF M + TF+T ++A L ++ G QIH LK+G V
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 146
Query: 251 ALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAK- 309
+L+DMYSKCG I +A+ F ++ +++ + WN++IAG+ GY +AL + M+++ K
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 310 -IDHFTISIVIRICVRLASLEHAKQAHAALVRHGF--GSDIVANTALVDFYSKWGRMEDA 366
D FT++ +++ C + KQ H LVR GF S +LVD Y K G + A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 367 RHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYS 426
R FD++ K +ISW++LI GY G+ +A+ +F+++ + +++ +
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326
Query: 427 GLSERGWEIFYSMSRDHKVK-PRAMHYACM---IELLGREGLLDEAFALIRRAPFEPTKN 482
L +G ++ + VK P + + + +++ + GL+DEA + +
Sbjct: 327 ALLRQGKQM-----QALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS 381
Query: 483 MWVALLTACRMHGNLELGKFAAEKLYEM-----DPGKLCNYVMLLNIYNSSGKLKEAAGV 537
W ++T HG LGK + YEM +P ++C Y+ +L+ + SG +KE +
Sbjct: 382 -WTVVITGYGKHG---LGKKSVRIFYEMLRHNIEPDEVC-YLAVLSACSHSGMIKEGEEL 436
Query: 538 LQTL 541
L
Sbjct: 437 FSKL 440
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 126/228 (55%), Gaps = 6/228 (2%)
Query: 212 RTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQ 271
+ +++R GL G Q+H LK G G + + LIDMY KC A FD
Sbjct: 7 QNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS 66
Query: 272 MPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA 331
MPE+ V W+++++G+ L+G + +LS++ EM G + FT S ++ C L +LE
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 332 KQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNH 391
Q H ++ GF + +LVD YSK GR+ +A VF R+ +++ISWNA+IAG+ +
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 392 GQGEQAIQMFEQM----LRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
G G +A+ F M ++ER P+ T ++L ACS +G+ G +I
Sbjct: 187 GYGSKALDTFGMMQEANIKER--PDEFTLTSLLKACSSTGMIYAGKQI 232
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/609 (33%), Positives = 334/609 (54%), Gaps = 48/609 (7%)
Query: 117 VNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDV 176
+ +C R++ K + +++ G + N ++ ++ KCG A ++F +MP RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 177 VSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN-DGRSRTFATMVRASAGLGLIQVGRQIHS 235
++W +V+ L + + +F + F+ +V+A A LG I GRQ+H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 236 CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEE 295
+ D V +L+DMY+KCG + A+ FD + K T+ W ++++GYA G EE
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 296 AL-------------------------------SIYLEMRDSGAKI-DHFTISIVIRICV 323
AL S++ EMR I D +S ++ C
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
LA+ +Q H ++ GF S + + AL+D Y+K + A+ +F RM ++V+SW +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
LI G HGQ E+A+ +++ M+ V PN VTF+ ++ ACS+ G E+G E+F SM++D+
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
++P HY C+++LLGR GLLDEA LI PF P + W ALL+AC+ G ++G
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 504 AEKLYE----MDPGKLCNYVMLLNIYNSS---GKLKEAAGVLQTLKRKGLRMLPTCTWIE 556
A+ L DP Y++L NIY S+ GK+ EA L ++ +R P + +E
Sbjct: 430 ADHLVSSFKLKDPS---TYILLSNIYASASLWGKVSEARRKLGEME---VRKDPGHSSVE 483
Query: 557 VKKQPHAFLCGDKSHTQTKEIYQKVDEILDEIS-RHGYIKENEMLLPDVDEEE-QRLQQY 614
V+K+ F G+ SH ++I++ + ++ +E+ R+GY+ + +L D+DE+E ++L +
Sbjct: 484 VRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFW 543
Query: 615 HSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRN 674
HSE+ A+A+GL+ TP++I + RVCGDCH +K I+ +T REI+VRDA+R+HHF+
Sbjct: 544 HSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKG 603
Query: 675 ATCSCGDYW 683
CSC D+W
Sbjct: 604 GKCSCNDFW 612
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 158/340 (46%), Gaps = 34/340 (10%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
+ ALV C L SI ++V + I S + D + + ++ M+ KCGL+ A+ +F +
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 166
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLF-------LFMWVEFNDG--------------- 209
++ +SW ++ G SG EA LF L+ W G
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFT 226
Query: 210 ---RSRT-------FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKC 259
R R +++V A A L GRQ+H + +G F++ ALIDMY+KC
Sbjct: 227 EMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 260 GSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVI 319
+ A+ F +M + V W S+I G A HG +E+AL++Y +M G K + T +I
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 320 RICVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHVFDRM-HRKN 377
C + +E ++ ++ + +G + T L+D + G +++A ++ M +
Sbjct: 347 YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPD 406
Query: 378 VISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
+W AL++ G+G+ I++ + ++ + + T++
Sbjct: 407 EPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYI 446
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/574 (33%), Positives = 320/574 (55%), Gaps = 2/574 (0%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+D + +GL + K V ++ + + D + +L ++ + G M DA K+F +M
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
P+ DVV W +I +G +EA LF+ M F T ++++ A +G
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
Q+H +K+G D +V+ ALID+Y+KC ++ A F ++ K V WN++I GY G
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
+A S++ E + + T S + C LAS++ Q H ++ + +
Sbjct: 429 EGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN 488
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
+L+D Y+K G ++ A+ VF+ M +V SWNALI+GY HG G QA+++ + M P
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKP 548
Query: 412 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 471
N +TFL VLS CS +GL ++G E F SM RDH ++P HY CM+ LLGR G LD+A L
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKL 608
Query: 472 IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKL 531
I P+EP+ +W A+L+A N E + +AE++ +++P YV++ N+Y + +
Sbjct: 609 IEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQW 668
Query: 532 KEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRH 591
A + +++K G++ P +WIE + H F G H K I ++ + + +R
Sbjct: 669 ANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRA 728
Query: 592 GYIKENEMLLPDVDEEEQRLQQY-HSEKLAIAFGLINTPDW-TPLQITQGHRVCGDCHNA 649
GY+ + +L D+D+EE+ + + HSE+LA+A+GL+ P + I + R+C DCH+A
Sbjct: 729 GYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSA 788
Query: 650 IKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
+K+I+ + R++V+RD +RFHHF CSCGD+W
Sbjct: 789 MKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 178/354 (50%), Gaps = 12/354 (3%)
Query: 86 CNRHREAMELFEILELEGDCAD-----VGASTYDALVNVCVGLRSIRGVKKVFNYMISSG 140
CNR R+ + L+ + +D + + Y A++ C+ K + ++ G
Sbjct: 20 CNRIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKG 79
Query: 141 FEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFL 200
DL+ N +L +VK G DA LF +MPER+ VS++T+ G + GL+
Sbjct: 80 SCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYS 135
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG 260
+ E ++ F + ++ L ++ +HS +K+G ++FV ALI+ YS CG
Sbjct: 136 RLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCG 195
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
S++ A+ F+ + K V W I++ Y +GY E++L + MR +G +++T ++
Sbjct: 196 SVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALK 255
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
+ L + + AK H +++ + D L+ Y++ G M DA VF+ M + +V+
Sbjct: 256 ASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP 315
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSY---SGLSER 431
W+ +IA + +G +A+ +F +M V+PN T ++L+ C+ SGL E+
Sbjct: 316 WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/569 (34%), Positives = 321/569 (56%), Gaps = 2/569 (0%)
Query: 117 VNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDV 176
V VC + +K++ Y + F + + N + + KCG + A+++F + + V
Sbjct: 402 VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTV 461
Query: 177 VSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSC 236
SW +IGG S D + L M + S T +++ A + L +++G+++H
Sbjct: 462 NSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGF 521
Query: 237 ALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEA 296
++ + D FV +++ +Y CG + Q FD M +K+ V WN++I GY +G+ + A
Sbjct: 522 IIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRA 581
Query: 297 LSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDF 356
L ++ +M G ++ ++ V C L SL ++AHA ++H D +L+D
Sbjct: 582 LGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDM 641
Query: 357 YSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTF 416
Y+K G + + VF+ + K+ SWNA+I GYG HG ++AI++FE+M R P+ +TF
Sbjct: 642 YAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF 701
Query: 417 LAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI-RRA 475
L VL+AC++SGL G M +KP HYAC+I++LGR G LD+A ++
Sbjct: 702 LGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEM 761
Query: 476 PFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAA 535
E +W +LL++CR+H NLE+G+ A KL+E++P K NYV+L N+Y GK ++
Sbjct: 762 SEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVR 821
Query: 536 GVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIK 595
V Q + LR C+WIE+ ++ +F+ G++ +EI + +IS+ GY
Sbjct: 822 KVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRP 881
Query: 596 ENEMLLPDVDEEEQRLQ-QYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIA 654
+ + D+ EEE+ Q + HSEKLA+ +GLI T + T +++ + R+C DCHNA KLI+
Sbjct: 882 DTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLIS 941
Query: 655 MVTGREIVVRDASRFHHFRNATCSCGDYW 683
V REIVVRD RFHHF+N CSCGDYW
Sbjct: 942 KVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 132/525 (25%), Positives = 229/525 (43%), Gaps = 62/525 (11%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY ++ C G+ + V ++ +G D+++ N ++ + G + DA +LF M
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR----SRTFATMVRASAGLGLI 227
PER++VSW ++I D+G E+F L M E DG T T++ A I
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
+G+ +H A+K+ + + + AL+DMYSKCG I +AQ F K V WN+++ G+
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 288 ALHGYSEEALSIYLEMRDSG--AKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGS 345
+ G + + +M G K D TI + +C + L K+ H ++ F
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 428
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
+ + A V Y+K G + A+ VF + K V SWNALI G+ ++ QM
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 406 RERVIPNHVTFLAVLSACS----------YSGLSERGW---EIFYSMSR----------- 441
++P+ T ++LSACS G R W ++F +S
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 548
Query: 442 ------DHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLT---ACR 492
D + + +I + G D A + R+ + ++++ AC
Sbjct: 549 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 493 MHGNLELGK----FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRM 548
+ +L LG+ +A + L E D C+ L+++Y +G + +++ V LK K
Sbjct: 609 LLPSLRLGREAHAYALKHLLEDDAFIACS---LIDMYAKNGSITQSSKVFNGLKEK---- 661
Query: 549 LPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGY 593
T +W +A + G H KE + + +E+ R G+
Sbjct: 662 -STASW-------NAMIMGYGIHGLAKEAIK----LFEEMQRTGH 694
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 213/456 (46%), Gaps = 14/456 (3%)
Query: 95 LFEILELEGDCADV-GASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLL 153
L E++E GD A + +T ++ VC R I K V + + + +L + N ++
Sbjct: 276 LGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMD 335
Query: 154 MHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR- 212
M+ KCG + +A+ +F ++VVSW T++GG GD F + M D ++
Sbjct: 336 MYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADE 395
Query: 213 -TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQ 271
T V + +++H +LK + VA A + Y+KCGS+ AQ F
Sbjct: 396 VTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHG 455
Query: 272 MPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA 331
+ KT WN++I G+A +L +L+M+ SG D FT+ ++ C +L SL
Sbjct: 456 IRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG 515
Query: 332 KQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNH 391
K+ H ++R+ D+ +++ Y G + + +FD M K+++SWN +I GY +
Sbjct: 516 KEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQN 575
Query: 392 GQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMH 451
G ++A+ +F QM+ + ++ + V ACS G E ++ + H ++ A
Sbjct: 576 GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA-HAYALKHLLEDDAFI 634
Query: 452 YACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM- 510
+I++ + G + ++ + E + W A++ +HG L K A + EM
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHG---LAKEAIKLFEEMQ 690
Query: 511 ----DPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLK 542
+P L ++ +L N SG + E L +K
Sbjct: 691 RTGHNPDDL-TFLGVLTACNHSGLIHEGLRYLDQMK 725
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 141/294 (47%), Gaps = 9/294 (3%)
Query: 138 SSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFG 197
S+ D + R++ M+ CG D+R +F + +++ W VI + Y E
Sbjct: 113 STRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 172
Query: 198 LFLFMWVEFND--GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDM 255
F+ M + D T+ +++A AG+ + +G +H +K G+ D FV AL+
Sbjct: 173 TFIEM-ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF 231
Query: 256 YSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR----DSGAKID 311
Y G + DA FD MPE+ V WNS+I ++ +G+SEE+ + EM D D
Sbjct: 232 YGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPD 291
Query: 312 HFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
T+ V+ +C R + K H V+ ++V N AL+D YSK G + +A+ +F
Sbjct: 292 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 351
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR--ERVIPNHVTFLAVLSAC 423
+ KNV+SWN ++ G+ G + QML E V + VT L + C
Sbjct: 352 MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 177/331 (53%), Gaps = 18/331 (5%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T +L++ C L+S+R K+V ++I + E DL++ VL +++ CG + + LF M
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 557
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
++ +VSW TVI G + +G A G+F M + + + A + L +++GR
Sbjct: 558 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 617
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
+ H+ ALK + D+F+AC+LIDMY+K GSI + F+ + EK+T WN++I GY +HG
Sbjct: 618 EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHG 677
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFG--SDIVA 349
++EA+ ++ EM+ +G D T V+ C + L H + ++ FG ++
Sbjct: 678 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH-SGLIHEGLRYLDQMKSSFGLKPNLKH 736
Query: 350 NTALVDFYSKWGRMEDA-RHVFDRMHRK-NVISWNALIAG---YGNHGQGEQ-AIQMFEQ 403
++D + G+++ A R V + M + +V W +L++ + N GE+ A ++FE
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFEL 796
Query: 404 MLRERVIPNHVTFLAVLSACSYSGLSERGWE 434
E P + L+ L Y+GL + WE
Sbjct: 797 ---EPEKPENYVLLSNL----YAGLGK--WE 818
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 135/281 (48%), Gaps = 25/281 (8%)
Query: 183 IGGLVDSGDYSEAFGLFLFMWVEF--NDGRSRTFATMVRASAGLGL--------IQVGRQ 232
I ++GD ++F EF +D S +VR + GL L I++GR+
Sbjct: 50 ISNFCETGDLDKSFRTV----QEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRK 105
Query: 233 IHS-CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
IH + + D + +I MY+ CGS +D++ FD + K WN++I+ Y+ +
Sbjct: 106 IHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNE 165
Query: 292 YSEEALSIYLEMRDSGAKI-DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
+E L ++EM + + DHFT VI+ C ++ + H +V+ G D+
Sbjct: 166 LYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVG 225
Query: 351 TALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER-- 408
ALV FY G + DA +FD M +N++SWN++I + ++G E++ + +M+ E
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 409 --VIPNHVTFLAVLSACSYS-----GLSERGWEIFYSMSRD 442
+P+ T + VL C+ G GW + + ++
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/618 (34%), Positives = 335/618 (54%), Gaps = 56/618 (9%)
Query: 116 LVNVCVGLRSIRGVKKVFNYMISSGFE--PDLYMMNRVLLMHVKCGLMLDARKLFGDMP- 172
L+ C +R K++ + +SG + P Y+ N + + G M+ A+KLF ++P
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 173 -ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW---VEFNDGRSRTFATMVRASAGLGLIQ 228
E+D V W T++ G + LF+ M VE +D + LG Q
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCG---------------------------- 260
G H A+KMGV V AL+DMY KCG
Sbjct: 132 QG---HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVV 188
Query: 261 ---SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR-DSGAKIDHFTIS 316
+E + F +MPE+ V W ++AGY G++ E L + EM G ++ T+
Sbjct: 189 KWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLC 248
Query: 317 IVIRICVRLASLEHAKQAHAALVR-------HGFGSDIVANTALVDFYSKWGRMEDARHV 369
++ C + +L + H ++ D++ TALVD Y+K G ++ + +V
Sbjct: 249 SMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 370 FDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLS 429
F M ++NV++WNAL +G HG+G I MF QM+RE V P+ +TF AVLSACS+SG+
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIV 367
Query: 430 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLT 489
+ GW F+S+ R + ++P+ HYACM++LLGR GL++EA L+R P P + + +LL
Sbjct: 368 DEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLG 426
Query: 490 ACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRML 549
+C +HG +E+ + +L +M PG +++ N+Y + G+ A G+ +L+++G+R +
Sbjct: 427 SCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKI 486
Query: 550 PTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLP----DVD 605
P + I V H F GD+SH +TKEIY K++E+++ I GY+ + L+ D++
Sbjct: 487 PGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLE 546
Query: 606 EEEQRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRD 665
E+EQ L HSEKLA+ FGL+ T TPL + + R+C DCH+A+K+++ V REI++RD
Sbjct: 547 EKEQAL-CCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRD 605
Query: 666 ASRFHHFRNATCSCGDYW 683
+RFH F+ +CSC DYW
Sbjct: 606 RNRFHQFKGGSCSCSDYW 623
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 331/602 (54%), Gaps = 41/602 (6%)
Query: 120 CVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD--ARKLFGDMPERDVV 177
C+ L I K++ +++ G + Y++ +++ K G+ +D AR++ + R+
Sbjct: 59 CINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 178 SWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCA 237
W VI G G + EA ++ M E S TF+ +++A + + +GRQ H+
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 238 LKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSE--- 294
++ +V +IDMY KC SI+ A+ FD+MPE+ + W +IA YA G E
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 295 ----------------------------EALSIYLEMRDSGAKIDHFTISIVIRICVRLA 326
EAL + M SG + D T++ I C +L
Sbjct: 236 ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
Query: 327 SLEHAKQAHAALVRHGFG-SD-IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNAL 384
+ ++A +A + G+ SD +V +AL+D YSK G +E+A +VF M+ KNV +++++
Sbjct: 296 ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSM 355
Query: 385 IAGYGNHGQGEQAIQMFEQMLRERVI-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
I G HG+ ++A+ +F M+ + I PN VTF+ L ACS+SGL ++G ++F SM +
Sbjct: 356 ILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTF 415
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
V+P HY CM++LLGR G L EA LI+ EP +W ALL ACR+H N E+ + A
Sbjct: 416 GVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIA 475
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKK-QPH 562
AE L+E++P + NY++L N+Y S+G V + +K KGL+ P +W+ K Q H
Sbjct: 476 AEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMH 535
Query: 563 AFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQQY-HSEKLAI 621
F G+ +H + +I K++E+++ ++ GY + + DV + +RL H+EKLA+
Sbjct: 536 KFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLAL 595
Query: 622 AFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGD 681
AF L+ T + + I + R+C DCH ++L + VTG+ I++RD RFHHFR+ CSCGD
Sbjct: 596 AFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGD 655
Query: 682 YW 683
+W
Sbjct: 656 FW 657
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/587 (33%), Positives = 323/587 (55%), Gaps = 29/587 (4%)
Query: 112 TYDALVNVCVGLRSIRGVKKV-FNYMISSGFEPDLYMMNRVL------------------ 152
+ DAL +C + S + V V F +++ F PD + R+L
Sbjct: 326 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385
Query: 153 --LMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
M+ K G M ++R++ MP RDVV+W +IGG + D +A F M VE G
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE---GV 442
Query: 211 SRTFATMVRA-SAGL---GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
S + T+V SA L L++ G+ +H+ + G D V +LI MY+KCG + +Q
Sbjct: 443 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 502
Query: 267 CAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA 326
F+ + + + WN+++A A HG+ EE L + +MR G +D F+ S + +LA
Sbjct: 503 DLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLA 562
Query: 327 SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIA 386
LE +Q H V+ GF D A D YSK G + + + +++ SWN LI+
Sbjct: 563 VLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILIS 622
Query: 387 GYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 446
G HG E+ F +ML + P HVTF+++L+ACS+ GL ++G + ++RD ++
Sbjct: 623 ALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLE 682
Query: 447 PRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEK 506
P H C+I+LLGR G L EA I + P +P +W +LL +C++HGNL+ G+ AAE
Sbjct: 683 PAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAEN 742
Query: 507 LYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLC 566
L +++P YV+ N++ ++G+ ++ V + + K ++ C+W+++K + +F
Sbjct: 743 LSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGI 802
Query: 567 GDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQQY-HSEKLAIAFGL 625
GD++H QT EIY K+++I I GY+ + L D DEE++ + HSE+LA+A+ L
Sbjct: 803 GDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYAL 862
Query: 626 INTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHF 672
++TP+ + ++I + R+C DCH+ K ++ V GR IV+RD RFHHF
Sbjct: 863 MSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHF 909
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 168/344 (48%), Gaps = 2/344 (0%)
Query: 91 EAMELFEILE-LEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMN 149
E E+ +I + + G+ ++ +++ C L+ +++ ++ SG E L + N
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182
Query: 150 RVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDG 209
++ M G + A +F M ERD +SW ++ +G E+F +F M ++
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 242
Query: 210 RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
S T +T++ + + GR IH +KMG V L+ MY+ G +A F
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
QMP K + WNS++A + G S +AL + M SG +++ T + + C E
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 362
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
+ H +V G + + ALV Y K G M ++R V +M R++V++WNALI GY
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSG-LSERG 432
++A+ F+ M E V N++T ++VLSAC G L ERG
Sbjct: 423 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERG 466
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 159/302 (52%)
Query: 131 KVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSG 190
+V ++ SG D+Y+ +L ++ GL+ +RK+F +MP+R+VVSW +++ G D G
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 191 DYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVAC 250
+ E ++ M E + + ++ + L +GRQI +K G+ V
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182
Query: 251 ALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI 310
+LI M G+++ A FDQM E+ T+ WNSI A YA +G+ EE+ I+ MR ++
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 242
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
+ T+S ++ + + + + H +V+ GF S + L+ Y+ GR +A VF
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 371 DRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 430
+M K++ISWN+L+A + N G+ A+ + M+ N+VTF + L+AC E
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 362
Query: 431 RG 432
+G
Sbjct: 363 KG 364
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 1/256 (0%)
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLG-LIQV 229
MP R+ VSW T++ G+V G Y E F M S A++V A G + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
G Q+H K G+ D +V+ A++ +Y G + ++ F++MP++ V W S++ GY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
G EE + IY MR G + ++S+VI C L +Q +V+ G S +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
+L+ G ++ A ++FD+M ++ ISWN++ A Y +G E++ ++F M R
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 410 IPNHVTFLAVLSACSY 425
N T +LS +
Sbjct: 241 EVNSTTVSTLLSVLGH 256
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 360 bits (925), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 189/551 (34%), Positives = 308/551 (55%), Gaps = 38/551 (6%)
Query: 167 LFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL 226
LF + D+ + I +G +AF L++ + + TF++++++ +
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS---- 141
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKT---------- 276
+ G+ IH+ LK G+G D +VA L+D+Y+K G + AQ FD+MPE++
Sbjct: 142 TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 277 ---------------------TVGWNSIIAGYALHGYSEEALSIYLEMRDSG-AKIDHFT 314
V WN +I GYA HG+ +AL ++ ++ G K D T
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 315 ISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH 374
+ + C ++ +LE + H + ++ T L+D YSK G +E+A VF+
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 375 RKNVISWNALIAGYGNHGQGEQAIQMFEQMLR-ERVIPNHVTFLAVLSACSYSGLSERGW 433
RK++++WNA+IAGY HG + A+++F +M + P +TF+ L AC+++GL G
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 434 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRM 493
IF SM +++ +KP+ HY C++ LLGR G L A+ I+ + +W ++L +C++
Sbjct: 382 RIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKL 441
Query: 494 HGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCT 553
HG+ LGK AE L ++ YV+L NIY S G + A V +K KG+ P +
Sbjct: 442 HGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIS 501
Query: 554 WIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDE-EEQRLQ 612
IE++ + H F GD+ H+++KEIY + +I + I HGY+ +L D++E E+++
Sbjct: 502 TIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSL 561
Query: 613 QYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHF 672
Q HSE+LAIA+GLI+T +PL+I + RVC DCH KLI+ +TGR+IV+RD +RFHHF
Sbjct: 562 QVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHF 621
Query: 673 RNATCSCGDYW 683
+ +CSCGD+W
Sbjct: 622 TDGSCSCGDFW 632
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 136/296 (45%), Gaps = 36/296 (12%)
Query: 115 ALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER 174
LV+V + +KVF+ M E L ++ + K G + AR LF M ER
Sbjct: 166 GLVDVYAKGGDVVSAQKVFDRMP----ERSLVSSTAMITCYAKQGNVEAARALFDSMCER 221
Query: 175 DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR----TFATMVRASAGLGLIQVG 230
D+VSW +I G G ++A LF + E G+ + T + A + +G ++ G
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAE---GKPKPDEITVVAALSACSQIGALETG 278
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
R IH + + V LIDMYSKCGS+E+A F+ P K V WN++IAGYA+H
Sbjct: 279 RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMH 338
Query: 291 GYSEEALSIYLEMRD-SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR--------- 340
GYS++AL ++ EM+ +G + T ++ C AHA LV
Sbjct: 339 GYSQDALRLFNEMQGITGLQPTDITFIGTLQAC-----------AHAGLVNEGIRIFESM 387
Query: 341 ---HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH-RKNVISWNALIAGYGNHG 392
+G I LV + G+++ A M+ + + W++++ HG
Sbjct: 388 GQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 4/204 (1%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A+ LF+ L EG T A ++ C + ++ + + ++ SS ++ +
Sbjct: 241 DALMLFQKLLAEGK-PKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTG 299
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW-VEFNDG 209
++ M+ KCG + +A +F D P +D+V+W +I G G +A LF M +
Sbjct: 300 LIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQP 359
Query: 210 RSRTFATMVRASAGLGLIQVG-RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
TF ++A A GL+ G R S + G+ L+ + + G ++ A
Sbjct: 360 TDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYET 419
Query: 269 FDQMP-EKTTVGWNSIIAGYALHG 291
M + +V W+S++ LHG
Sbjct: 420 IKNMNMDADSVLWSSVLGSCKLHG 443
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 320/578 (55%), Gaps = 39/578 (6%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ ++ C +I +K+ G L++ N ++ M+ KCG + +AR + +M
Sbjct: 142 TFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
RDVVSW +++ G + + +A ++V R
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDA-------------------------------LEVCR 230
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
++ S + G + + A+ + ++ ++ + F +M +K+ V WN +I Y +
Sbjct: 231 EMESVKISHDAGTMASLLPAVSNTTTE--NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNA 288
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
EA+ +Y M G + D +I+ V+ C ++L K+ H + R +++
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 348
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
AL+D Y+K G +E AR VF+ M ++V+SW A+I+ YG G+G A+ +F ++ ++P
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP 408
Query: 412 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 471
+ + F+ L+ACS++GL E G F M+ +K+ PR H ACM++LLGR G + EA+
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRF 468
Query: 472 IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKL 531
I+ EP + +W ALL ACR+H + ++G AA+KL+++ P + YV+L NIY +G+
Sbjct: 469 IQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRW 528
Query: 532 KEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRH 591
+E + +K KGL+ P + +EV + H FL GD+SH Q+ EIY+++D ++ ++
Sbjct: 529 EEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKEL 588
Query: 592 GYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIAFGLINTPDW-----TPLQITQGHRVCGD 645
GY+ ++E L DV+EE++ HSEKLAI F L+NT + ++IT+ R+CGD
Sbjct: 589 GYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGD 648
Query: 646 CHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
CH A KLI+ +T REI++RD +RFH FR CSCGDYW
Sbjct: 649 CHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 151/333 (45%), Gaps = 29/333 (8%)
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAG 286
I+ R +HS + + +S + L+ Y+ + A+ FD++PE+ + N +I
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
Y +G+ E + ++ M + DH+T V++ C ++ ++ H + + G S
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
+ LV Y K G + +AR V D M R++V+SWN+L+ GY + + + A+++ +M
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 407 ERVIPNHVTFLAVLSACSYSGLSERGW--EIFYSMSRDHKVKPRAMHYACMIELLGREGL 464
++ + T ++L A S + + ++F+ M K + + MI + + +
Sbjct: 235 VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMG-----KKSLVSWNVMIGVYMKNAM 289
Query: 465 LDEAFALIRRAP---FEPTKNMWVALLTAC----------RMHGNLELGKFAAEKLYEMD 511
EA L R FEP ++L AC ++HG +E K L E
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN- 348
Query: 512 PGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
L+++Y G L++A V + +K +
Sbjct: 349 --------ALIDMYAKCGCLEKARDVFENMKSR 373
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA+EL+ +E +G D A + +++ C ++ KK+ Y+ P+L + N
Sbjct: 292 EAVELYSRMEADGFEPD--AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ M+ KCG + AR +F +M RDVVSW +I SG +A LF +
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSF--------VACALIDMYSKCGSI 262
S F T + A + GL++ GR SC M D + +AC ++D+ + G +
Sbjct: 410 SIAFVTTLAACSHAGLLEEGR---SCFKLM---TDHYKITPRLEHLAC-MVDLLGRAGKV 462
Query: 263 EDAQCAFDQMP-EKTTVGWNSIIAGYALHGYSEEAL 297
++A M E W +++ +H ++ L
Sbjct: 463 KEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGL 498
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/564 (35%), Positives = 314/564 (55%), Gaps = 11/564 (1%)
Query: 127 RGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGL 186
+ +KK+ ++ +GF ++ ++L V G M AR++F +M + + W T+ G
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 187 VDSGDYSEAFGLFLFMWVEFNDGRSR----TFATMVRASAGLGLIQVGRQIHSCALKMGV 242
V + E+ L ++ + D R T+ +V+A + LG G +H+ +K G
Sbjct: 85 VRNQLPFES----LLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGF 140
Query: 243 GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLE 302
G VA L+ MY K G + A+ F+ M K V WN+ +A G S AL + +
Sbjct: 141 GCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNK 200
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
M + D FT+ ++ C +L SLE ++ + + +I+ A +D + K G
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 260
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
E AR +F+ M ++NV+SW+ +I GY +G +A+ +F M E + PN+VTFL VLSA
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320
Query: 423 CSYSGLSERGWEIFYSM--SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPT 480
CS++GL G F M S D ++PR HYACM++LLGR GLL+EA+ I++ P EP
Sbjct: 321 CSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPD 380
Query: 481 KNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQT 540
+W ALL AC +H ++ LG+ A+ L E P +V+L NIY ++GK V
Sbjct: 381 TGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSK 440
Query: 541 LKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEML 600
+++ G + + + +E + + H F GDKSH Q+K IY+K+DEIL +I + GY+ + +
Sbjct: 441 MRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSV 500
Query: 601 LPDVDEEEQRLQ-QYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGR 659
DV+ EE+ +HSEKLAIAFGLI P+++ + R C DCH K ++ +T
Sbjct: 501 FHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTST 560
Query: 660 EIVVRDASRFHHFRNATCSCGDYW 683
EI++RD +RFHHFRN CSC ++W
Sbjct: 561 EIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 92 AMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRV 151
A+E F ++ D + T ++++ C L S+ +++++ + ++ + N
Sbjct: 194 ALEYFN--KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENAR 251
Query: 152 LLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRS 211
L MH+KCG AR LF +M +R+VVSW T+I G +GD EA LF M E
Sbjct: 252 LDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNY 311
Query: 212 RTFATMVRASAGLGLIQVGRQIHSCALKMGVGG----DSFVACALIDMYSKCGSIEDAQC 267
TF ++ A + GL+ G++ S ++ AC ++D+ + G +E+A
Sbjct: 312 VTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYAC-MVDLLGRSGLLEEAYE 370
Query: 268 AFDQMPEKTTVG-WNSIIAGYALH 290
+MP + G W +++ A+H
Sbjct: 371 FIKKMPVEPDTGIWGALLGACAVH 394
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 357 bits (916), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/601 (33%), Positives = 323/601 (53%), Gaps = 33/601 (5%)
Query: 116 LVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERD 175
+++ C L + +KV+ ++ +SG E + M++ ++ M++KC + A++LF + +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 176 VVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHS 235
+ + V G EA G+F M + + + + + L I G+ H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 236 CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG---- 291
L+ G + ALIDMY KC + A FD+M KT V WNSI+AGY +G
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 292 ---------------------------YSEEALSIYLEMRDS-GAKIDHFTISIVIRICV 323
EEA+ ++ M+ G D T+ + C
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
L +L+ AK + + ++G D+ T LVD +S+ G E A +F+ + ++V +W A
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
I G E+AI++F+ M+ + + P+ V F+ L+ACS+ GL ++G EIFYSM + H
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
V P +HY CM++LLGR GLL+EA LI P EP +W +LL ACR+ GN+E+ +A
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYA 661
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHA 563
AEK+ + P + +YV+L N+Y S+G+ + A V ++K KGLR P + I+++ + H
Sbjct: 662 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHE 721
Query: 564 FLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIA 622
F GD+SH + I +DE+ S G++ + +L DVDE+E+ HSEKLA+A
Sbjct: 722 FTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMA 781
Query: 623 FGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDY 682
+GLI++ T ++I + RVC DCH+ K + V REI++RD +RFH+ R CSCGD+
Sbjct: 782 YGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Query: 683 W 683
W
Sbjct: 842 W 842
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 191/387 (49%), Gaps = 12/387 (3%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP 143
GLCN EA+ LF + G D T+ ++ C R+ ++ ++ G+
Sbjct: 113 GLCN---EAILLFLRMMNSGISPD--KYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAK 167
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
DL++ N ++ + +CG + ARK+F +M ER+VVSW ++I G +A LF M
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 204 V-EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSI 262
E S T ++ A A L ++ G ++++ G+ + + AL+DMY KC +I
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 263 EDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC 322
+ A+ FD+ N++ + Y G + EAL ++ M DSG + D ++ I C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 323 VRLASLEHAKQAHAALVRHGFGS-DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISW 381
+L ++ K H ++R+GF S D + N AL+D Y K R + A +FDRM K V++W
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNICN-ALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 441
N+++AGY +G+ + A + FE M + N V++ ++S L E E+F SM
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 442 DHKVKPRAMHYACMIELLGREGLLDEA 468
V + + G G LD A
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLA 489
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG----WNSIIAG 286
+ H K G+ D L+ + G+ E A + + G +NS+I G
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
YA G EA+ ++L M +SG D +T + C + + + Q H +V+ G+ D
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
+ +LV FY++ G ++ AR VFD M +NV+SW ++I GY + A+ +F +M+R
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 407 -ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
E V PN VT + V+SAC+ E G E Y+ R+ ++ + + ++++ + +
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETG-EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 466 DEA 468
D A
Sbjct: 288 DVA 290
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 154/349 (44%), Gaps = 36/349 (10%)
Query: 90 REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP------ 143
REA+ +F ++ G D + + ++ C LR+I K Y++ +GFE
Sbjct: 319 REALGVFNLMMDSGVRPD--RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 144 ---DLYMM----------------------NRVLLMHVKCGLMLDARKLFGDMPERDVVS 178
D+YM N ++ +V+ G + A + F MPE+++VS
Sbjct: 377 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 179 WMTVIGGLVDSGDYSEAFGLFLFMWV-EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCA 237
W T+I GLV + EA +F M E + T ++ A LG + + + I+
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 238 LKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEAL 297
K G+ D + L+DM+S+CG E A F+ + + W + I A+ G +E A+
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 298 SIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDF 356
++ +M + G K D + C ++ K+ ++++ HG + V +VD
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 616
Query: 357 YSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
+ G +E+A + + M N + WN+L+A G E A E++
Sbjct: 617 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 355 bits (911), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 308/522 (59%), Gaps = 2/522 (0%)
Query: 164 ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAG 223
A +F + + + T+I G V+ + EA + M N+ + T+ +++A
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 224 LGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSI 283
L I+ G+QIH K+G+ D FV +LI+MY +CG +E + F+++ KT W+S+
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 284 IAGYALHGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
++ A G E L ++ M ++ K + + + C +L H L+R+
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFE 402
+I+ T+LVD Y K G ++ A H+F +M ++N ++++A+I+G HG+GE A++MF
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 403 QMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 462
+M++E + P+HV +++VL+ACS+SGL + G +F M ++ KV+P A HY C+++LLGR
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 463 GLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLL 522
GLL+EA I+ P E +W L+ CR+ N+ELG+ AA++L ++ +Y+++
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLIS 444
Query: 523 NIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVD 582
N+Y+ + A + KGL+ P + +E+K + H F+ D+SH + KEIY+ +
Sbjct: 445 NLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLH 504
Query: 583 EILDEISRHGYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIAFGLINTPDWTPLQITQGHR 641
++ ++ GY + +L +VDEEE++ + + HS+K+AIAFGL+ TP + ++I + R
Sbjct: 505 QMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLR 564
Query: 642 VCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
+C DCH K I+M+ REIVVRD +RFH F+ TCSC DYW
Sbjct: 565 MCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY L+ C L+SIR K++ + G E D+++ N ++ M+ +CG M + +F +
Sbjct: 134 TYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL 193
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN-DGRSRTFATMVRASAGLGLIQVG 230
+ SW +++ G +SE LF M E N + + A A G + +G
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 253
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
IH L+ + V +L+DMY KCG ++ A F +M ++ + ++++I+G ALH
Sbjct: 254 MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 313
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
G E AL ++ +M G + DH V+ C ++ ++ A +++ G +
Sbjct: 314 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEH 373
Query: 351 TA-LVDFYSKWGRMEDARHVFDRMH-RKNVISWNALIA 386
LVD + G +E+A + KN + W ++
Sbjct: 374 YGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 143/295 (48%), Gaps = 9/295 (3%)
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
S+ A F + + T +N++I GY EEAL Y EM G + D+FT +++
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
C RL S+ KQ H + + G +D+ +L++ Y + G ME + VF+++ K S
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVT-FLAVLSACSYSGLSERGWEIFYSM 439
W+++++ G + + +F M E + + ++ L AC+ +G G I +
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 440 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNM-WVALLTACRMHGNLE 498
R+ + + ++++ + G LD+A + ++ E N+ + A+++ +HG E
Sbjct: 261 LRNIS-ELNIIVQTSLVDMYVKCGCLDKALHIFQK--MEKRNNLTYSAMISGLALHGEGE 317
Query: 499 --LGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPT 551
L F+ ++P + YV +LN + SG +KE V + ++G ++ PT
Sbjct: 318 SALRMFSKMIKEGLEPDHVV-YVSVLNACSHSGLVKEGRRVFAEMLKEG-KVEPT 370
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 322/600 (53%), Gaps = 33/600 (5%)
Query: 116 LVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERD 175
+++ C L + +KV+ ++ +SG E + M++ ++ M++KC + A++LF + +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 176 VVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHS 235
+ + V G EA G+F M + + + + + L I G+ H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 236 CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG---- 291
L+ G + ALIDMY KC + A FD+M KT V WNSI+AGY +G
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 292 ---------------------------YSEEALSIYLEMRDS-GAKIDHFTISIVIRICV 323
EEA+ ++ M+ G D T+ + C
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
L +L+ AK + + ++G D+ T LVD +S+ G E A +F+ + ++V +W A
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
I G E+AI++F+ M+ + + P+ V F+ L+ACS+ GL ++G EIFYSM + H
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH 601
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
V P +HY CM++LLGR GLL+EA LI P EP +W +LL ACR+ GN+E+ +A
Sbjct: 602 GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYA 661
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHA 563
AEK+ + P + +YV+L N+Y S+G+ + A V ++K KGLR P + I+++ + H
Sbjct: 662 AEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHE 721
Query: 564 FLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIA 622
F GD+SH + I +DE+ S G++ + +L DVDE+E+ HSEKLA+A
Sbjct: 722 FTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMA 781
Query: 623 FGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDY 682
+GLI++ T ++I + RVC DCH+ K + V REI++RD +RFH+ R CSCGD+
Sbjct: 782 YGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 191/387 (49%), Gaps = 12/387 (3%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP 143
GLCN EA+ LF + G D T+ ++ C R+ ++ ++ G+
Sbjct: 113 GLCN---EAILLFLRMMNSGISPD--KYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAK 167
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
DL++ N ++ + +CG + ARK+F +M ER+VVSW ++I G +A LF M
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 204 V-EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSI 262
E S T ++ A A L ++ G ++++ G+ + + AL+DMY KC +I
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 263 EDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC 322
+ A+ FD+ N++ + Y G + EAL ++ M DSG + D ++ I C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 323 VRLASLEHAKQAHAALVRHGFGS-DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISW 381
+L ++ K H ++R+GF S D + N AL+D Y K R + A +FDRM K V++W
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNICN-ALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 441
N+++AGY +G+ + A + FE M + N V++ ++S L E E+F SM
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 442 DHKVKPRAMHYACMIELLGREGLLDEA 468
V + + G G LD A
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLA 489
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG----WNSIIAG 286
+ H K G+ D L+ + G+ E A + + G +NS+I G
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
YA G EA+ ++L M +SG D +T + C + + + Q H +V+ G+ D
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
+ +LV FY++ G ++ AR VFD M +NV+SW ++I GY + A+ +F +M+R
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 407 -ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
E V PN VT + V+SAC+ E G E Y+ R+ ++ + + ++++ + +
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETG-EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 466 DEA 468
D A
Sbjct: 288 DVA 290
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 154/349 (44%), Gaps = 36/349 (10%)
Query: 90 REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP------ 143
REA+ +F ++ G D + + ++ C LR+I K Y++ +GFE
Sbjct: 319 REALGVFNLMMDSGVRPD--RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 144 ---DLYMM----------------------NRVLLMHVKCGLMLDARKLFGDMPERDVVS 178
D+YM N ++ +V+ G + A + F MPE+++VS
Sbjct: 377 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 179 WMTVIGGLVDSGDYSEAFGLFLFMWV-EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCA 237
W T+I GLV + EA +F M E + T ++ A LG + + + I+
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 238 LKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEAL 297
K G+ D + L+DM+S+CG E A F+ + + W + I A+ G +E A+
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 298 SIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDF 356
++ +M + G K D + C ++ K+ ++++ HG + V +VD
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 616
Query: 357 YSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
+ G +E+A + + M N + WN+L+A G E A E++
Sbjct: 617 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/577 (31%), Positives = 327/577 (56%), Gaps = 6/577 (1%)
Query: 113 YDALVNVCVGLRSIR-GVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
Y L++ C+ +S+ G+K + + + ++++++ + C + ARK+F D+
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDV 193
Query: 172 PERDVVS---WMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQ 228
+ +++ W + G +G +A +++ M F + + + + ++A L ++
Sbjct: 194 TDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLR 253
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
VGR IH+ +K D V L+ +Y + G +DA+ FD M E+ V WNS+I+ +
Sbjct: 254 VGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLS 313
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
E +++ +M++ T++ ++ C R+A+L K+ HA +++ D+
Sbjct: 314 KKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVP 373
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
+L+D Y K G +E +R VFD M K++ SWN ++ Y +G E+ I +FE M+
Sbjct: 374 LLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG 433
Query: 409 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
V P+ +TF+A+LS CS +GL+E G +F M + +V P HYAC++++LGR G + EA
Sbjct: 434 VAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEA 493
Query: 469 FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSS 528
+I PF+P+ ++W +LL +CR+HGN+ +G+ AA++L+ ++P NYVM+ NIY +
Sbjct: 494 VKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADA 553
Query: 529 GKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKV-DEILDE 587
+ + +K++G++ C+W++VK + F+ G + + Y+KV E+ +
Sbjct: 554 KMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEA 613
Query: 588 ISRHGYIKENEMLLPDVDEEEQ-RLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDC 646
I + GY ++L DVDEE + HSE+LA + LI+T + P++IT+ RVC DC
Sbjct: 614 IEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADC 673
Query: 647 HNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
H+ +K+++ VT R IV+RD RFHHF + CSC DYW
Sbjct: 674 HSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 5/296 (1%)
Query: 109 GASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLF 168
G + + CV L+ +R + + ++ + D + N +L ++++ GL DARK+F
Sbjct: 235 GNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVF 294
Query: 169 GDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQ 228
M ER+VV+W ++I L E F LF M E T T++ A + + +
Sbjct: 295 DGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALL 354
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
G++IH+ LK D + +L+DMY KCG +E ++ FD M K WN ++ YA
Sbjct: 355 TGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYA 414
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
++G EE ++++ M +SG D T ++ C E+ + S +
Sbjct: 415 INGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPAL 474
Query: 349 ANTA-LVDFYSKWGRMEDARHVFDRMHRKNVIS-WNALIAG---YGNHGQGEQAIQ 399
+ A LVD + G++++A V + M K S W +L+ +GN GE A +
Sbjct: 475 EHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAK 530
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/580 (33%), Positives = 317/580 (54%), Gaps = 15/580 (2%)
Query: 111 STYDALVNVCVGLRSIRGVKKVFNYMISSGFEP-DLYMMNRVLLMHVKCGLMLDARKLFG 169
ST AL C + S + K++ + + S E D+ +M +L M+ K G + A ++F
Sbjct: 233 STMSAL-GACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN 291
Query: 170 DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQV 229
M +R++V+W +IG +G ++AF F + +G T + +++
Sbjct: 292 GMIQRNIVAWNVMIGCYARNGRVTDAF--LCFQKMSEQNGLQPDVITSINLLPASAILE- 348
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
GR IH A++ G + ALIDMY +CG ++ A+ FD+M EK + WNSIIA Y
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
+G + AL ++ E+ DS D TI+ ++ SL ++ HA +V+ + S+ +
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
+LV Y+ G +EDAR F+ + K+V+SWN++I Y HG G ++ +F +M+ RV
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528
Query: 410 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 469
PN TF ++L+ACS SG+ + GWE F SM R++ + P HY CM++L+GR G A
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAK 588
Query: 470 ALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSG 529
+ PF PT +W +LL A R H ++ + +FAAE++++M+ YV+LLN+Y +G
Sbjct: 589 RFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAG 648
Query: 530 KLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEIS 589
+ ++ + ++ KG+ + + +E K + H F GD+SH T +IY E+LD +S
Sbjct: 649 RWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIY----EVLDVVS 704
Query: 590 R-----HGYIKENEMLLPD-VDEEEQRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVC 643
R Y+ L P+ + + + HS +LA FGLI+T + + R+C
Sbjct: 705 RMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRIC 764
Query: 644 GDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
CH ++ + +T REIVV D+ FHHF N CSCG+YW
Sbjct: 765 RKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 241/500 (48%), Gaps = 45/500 (9%)
Query: 80 IEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISS 139
I+ C + EA++ + + G AD TY ++ G+ S+ KK+ +I
Sbjct: 102 IKGFTSCGLYIEAVQFYSRMVFAGVKADT--FTYPFVIKSVAGISSLEEGKKIHAMVIKL 159
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF 199
GF D+Y+ N ++ +++K G DA K+F +MPERD+VSW ++I G + GD + LF
Sbjct: 160 GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLF 219
Query: 200 LFMW-VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGV-GGDSFVACALIDMYS 257
M F R T + + A + + ++G++IH A++ + GD V +++DMYS
Sbjct: 220 KEMLKCGFKPDRFSTMSAL-GACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYS 278
Query: 258 KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISI 317
K G + A+ F+ M ++ V WN +I YA +G +A + +M + SI
Sbjct: 279 KYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSI 338
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKN 377
+ + +++ + H +R GF +V TAL+D Y + G+++ A +FDRM KN
Sbjct: 339 NL---LPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKN 395
Query: 378 VISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI-- 435
VISWN++IA Y +G+ A+++F+++ ++P+ T ++L A + S G EI
Sbjct: 396 VISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHA 455
Query: 436 -------------------FYSMSRDHKVKPRAMHYACMIELLGREGLLDE--------- 467
Y+M D + + ++ + +++ ++
Sbjct: 456 YIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRI 515
Query: 468 ---AFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL---YEMDPGKLCNYVML 521
F+ + + P K+ + +LL AC + G ++ G E + Y +DPG + +Y +
Sbjct: 516 SVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPG-IEHYGCM 574
Query: 522 LNIYNSSGKLKEAAGVLQTL 541
L++ +G A L+ +
Sbjct: 575 LDLIGRTGNFSAAKRFLEEM 594
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 181/365 (49%), Gaps = 14/365 (3%)
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
+ R L LM DA +LF +M + D W +I G G Y EA + M
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 208 DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQC 267
+ T+ ++++ AG+ ++ G++IH+ +K+G D +V +LI +Y K G DA+
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 268 AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLAS 327
F++MPE+ V WNS+I+GY G +L ++ EM G K D F+ + C + S
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 328 LEHAKQAHAALVRHGFGS-DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIA 386
+ K+ H VR + D++ T+++D YSK+G + A +F+ M ++N+++WN +I
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 306
Query: 387 GYGNHGQGEQAIQMFEQMLRERVI-PNHVTFLAVLSACS-YSGLSERGWEIFYSMSRDHK 444
Y +G+ A F++M + + P+ +T + +L A + G + G Y+M R
Sbjct: 307 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHG----YAMRRG-- 360
Query: 445 VKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAA 504
P + +I++ G G L A + R E W +++ A +G ++A
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGK----NYSA 415
Query: 505 EKLYE 509
+L++
Sbjct: 416 LELFQ 420
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 119/232 (51%), Gaps = 16/232 (6%)
Query: 204 VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIE 263
+EF+ G S+ ++R +V +Q++ AL + G ++ +E
Sbjct: 38 LEFDSGISKPARLVLRDR-----YKVTKQVNDPALTRALRG-----------FADSRLME 81
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
DA FD+M + WN +I G+ G EA+ Y M +G K D FT VI+
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
++SLE K+ HA +++ GF SD+ +L+ Y K G DA VF+ M ++++SWN+
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
+I+GY G G ++ +F++ML+ P+ + ++ L ACS+ + G EI
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/600 (31%), Positives = 311/600 (51%), Gaps = 18/600 (3%)
Query: 96 FEILELEGDCADVGASTYDALVNV-----CVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
FE+L+L G S + V C I K+ + G ++ N
Sbjct: 117 FEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNT 176
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFL------FMWV 204
++ M+ C +A ++ D+P D+ + + + G ++ G + E + F+W
Sbjct: 177 LVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVW- 235
Query: 205 EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED 264
+ T+ + +R + L + + Q+HS ++ G + ALI+MY KCG +
Sbjct: 236 -----NNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLY 290
Query: 265 AQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
AQ FD + +I+ Y EEAL+++ +M + +T +I++
Sbjct: 291 AQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAE 350
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNAL 384
L+ L+ H +++ G+ + ++ ALV+ Y+K G +EDAR F M +++++WN +
Sbjct: 351 LSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTM 410
Query: 385 IAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 444
I+G +HG G +A++ F++M+ IPN +TF+ VL ACS+ G E+G F + +
Sbjct: 411 ISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFD 470
Query: 445 VKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAA 504
V+P HY C++ LL + G+ +A +R AP E W LL AC + N LGK A
Sbjct: 471 VQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVA 530
Query: 505 EKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAF 564
E E P YV+L NI+ S + + A V + +G++ P +WI ++ Q H F
Sbjct: 531 EYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVF 590
Query: 565 LCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIAF 623
L D H + IY KV E++ +I GY + DVDEE++ YHSEKLA+A+
Sbjct: 591 LAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAY 650
Query: 624 GLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
GLI TP+ +PL +T+ R+C DCH+AIKLI+ ++ R IV+RD++RFHHF + CSC DYW
Sbjct: 651 GLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 198/416 (47%), Gaps = 10/416 (2%)
Query: 114 DALVNVCVGLRSIRGVKKVFNYMI---SSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
+ L+ VC +R + + ++I S D Y +N ++ ++VKC + ARKLF
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDL 94
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMV-RASAGLGLIQV 229
MPER+VVSW ++ G +SG E LF M+ + AT+V ++ + G I+
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
G+Q H C LK G+ FV L+ MYS C +A D +P ++S ++GY
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE 214
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
G +E L + + + ++ T +R+ L L A Q H+ +VR GF +++ A
Sbjct: 215 CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEA 274
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
AL++ Y K G++ A+ VFD H +N+ ++ Y E+A+ +F +M + V
Sbjct: 275 CGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEV 334
Query: 410 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 469
PN TF +L++ + L ++G ++ + + + M ++ + + G +++A
Sbjct: 335 PPNEYTFAILLNSIAELSLLKQG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 470 ALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMD-PGKLCNYVMLLNI 524
F W +++ C HG LG+ A E M G++ N + + +
Sbjct: 394 KAFSGMTFRDIVT-WNTMISGCSHHG---LGREALEAFDRMIFTGEIPNRITFIGV 445
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/496 (35%), Positives = 287/496 (57%), Gaps = 39/496 (7%)
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGS------------------------- 261
+ +G++ H+ L G+ D FV +L++MYS CG
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 262 ------IEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR-----DSGAKI 310
I+DA+ FD+MPE+ + W+ +I GY + G +EAL ++ EM+ ++ +
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
+ FT+S V+ C RL +LE K HA + ++ DIV TAL+D Y+K G +E A+ VF
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 371 DRM-HRKNVISWNALIAGYGNHGQGEQAIQMFEQML-RERVIPNHVTFLAVLSACSYSGL 428
+ + +K+V +++A+I +G ++ Q+F +M + + PN VTF+ +L AC + GL
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 429 SERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALL 488
G F M + + P HY CM++L GR GL+ EA + I P EP +W +LL
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 489 TACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRM 548
+ RM G+++ + A ++L E+DP YV+L N+Y +G+ E + ++ KG+
Sbjct: 378 SGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINK 437
Query: 549 LPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEE 608
+P C+++EV+ H F+ GD+S +++ IY +DEI+ + GY+ + + +L D++E++
Sbjct: 438 VPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKD 497
Query: 609 QRLQ-QYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDAS 667
+ + YHSEKLAIAF L+ T TP++I + R+CGDCH +K+I+ + REIVVRD +
Sbjct: 498 KEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCN 557
Query: 668 RFHHFRNATCSCGDYW 683
RFHHFR+ +CSC D+W
Sbjct: 558 RFHHFRDGSCSCRDFW 573
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 141/282 (50%), Gaps = 13/282 (4%)
Query: 115 ALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER 174
+L+N+ +R ++VF+ SG DL N V+ + K GL+ DARKLF +MPER
Sbjct: 102 SLLNMYSSCGDLRSAQRVFD---DSG-SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER 157
Query: 175 DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVE-----FNDGRSRTFATMVRASAGLGLIQV 229
+V+SW +I G V G Y EA LF M + F T +T++ A LG ++
Sbjct: 158 NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQ 217
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTV-GWNSIIAGYA 288
G+ +H+ K V D + ALIDMY+KCGS+E A+ F+ + K V ++++I A
Sbjct: 218 GKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLA 277
Query: 289 LHGYSEEALSIYLEMRDS-GAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH-GFGSD 346
++G ++E ++ EM S + T ++ CV + K ++ G
Sbjct: 278 MYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPS 337
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAG 387
I +VD Y + G +++A M +V+ W +L++G
Sbjct: 338 IQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 12/238 (5%)
Query: 85 LCNRHREAMELFEILEL-EGDCADVGAS--TYDALVNVCVGLRSIRGVKKVFNYMISSGF 141
+C +++EA++LF ++L + + A V + T +++ C L ++ K V Y+
Sbjct: 171 MCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHV 230
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDM-PERDVVSWMTVIGGLVDSGDYSEAFGLFL 200
E D+ + ++ M+ KCG + A+++F + ++DV ++ +I L G E F LF
Sbjct: 231 EIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFS 290
Query: 201 FMWVEFN-DGRSRTFATMVRASAGLGLIQVGRQIHSCAL-KMGVGGDSFVACALIDMYSK 258
M N + S TF ++ A GLI G+ + + G+ ++D+Y +
Sbjct: 291 EMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGR 350
Query: 259 CGSIEDAQCAFDQMP-EKTTVGWNSIIAGYALHG---YSEEALS--IYLEMRDSGAKI 310
G I++A+ MP E + W S+++G + G E AL I L+ +SGA +
Sbjct: 351 SGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYV 408
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 339 bits (869), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 301/562 (53%), Gaps = 22/562 (3%)
Query: 142 EP-DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLV-DSGDYSEAFGLF 199
EP L++ ++L + + A ++F + W T+I D EAF L+
Sbjct: 79 EPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLY 138
Query: 200 LFMWVEFNDGRSR-TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSK 258
M + TF +++A A + G+Q+H +K G GGD +V LI +Y
Sbjct: 139 RKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGS 198
Query: 259 CGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIV 318
CG ++ A+ FD+MPE++ V WNS+I G + AL ++ EM+ S + D +T+ V
Sbjct: 199 CGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSV 257
Query: 319 IRICVRLASLEHAKQAHAALVRH---GFGSDIVANTALVDFYSKWGRMEDARHVFDRMHR 375
+ C L SL AHA L+R D++ +L++ Y K G + A VF M +
Sbjct: 258 LSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 317
Query: 376 KNVISWNALIAGYGNHGQGEQAIQMFEQML--RERVIPNHVTFLAVLSACSYSGLSERGW 433
+++ SWNA+I G+ HG+ E+A+ F++M+ RE V PN VTF+ +L AC++ G +G
Sbjct: 318 RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR 377
Query: 434 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRM 493
+ F M RD+ ++P HY C+++L+ R G + EA ++ P +P +W +LL AC
Sbjct: 378 QYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCK 437
Query: 494 HG-NLELGKFAAEKLY------EMDPGKLCN-YVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
G ++EL + A + E G YV+L +Y S+ + + V + + G
Sbjct: 438 KGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHG 497
Query: 546 LRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVD 605
+R P C+ IE+ H F GD SH QTK+IYQ++ I D + GY+ + P VD
Sbjct: 498 IRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQA-PLVD 556
Query: 606 EEEQRLQQY----HSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREI 661
++Y HSE+LAIAFGLIN P TP++I + RVC DCH KLI+ V EI
Sbjct: 557 ATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEI 616
Query: 662 VVRDASRFHHFRNATCSCGDYW 683
+VRD RFHHF++ +CSC DYW
Sbjct: 617 IVRDRVRFHHFKDGSCSCLDYW 638
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 162/328 (49%), Gaps = 14/328 (4%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
+R EA L+ + G+ + T+ ++ C + K+V ++ GF D+Y
Sbjct: 129 SRKEEAFMLYRKMLERGE-SSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVY 187
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+ N ++ ++ CG + ARK+F +MPER +VSW ++I LV G+Y A LF M F
Sbjct: 188 VNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSF 247
Query: 207 N-DGRSRTFATMVRASAGLGLIQVGRQIHSCALK---MGVGGDSFVACALIDMYSKCGSI 262
DG T +++ A AGLG + +G H+ L+ + V D V +LI+MY KCGS+
Sbjct: 248 EPDG--YTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSL 305
Query: 263 EDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIV--IR 320
A+ F M ++ WN++I G+A HG +EEA++ + M D + +++ V +
Sbjct: 306 RMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLI 365
Query: 321 ICVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-NV 378
C + +Q +VR + + +VD ++ G + +A + M K +
Sbjct: 366 ACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDA 425
Query: 379 ISWNALIAGYGNHGQGEQAIQMFEQMLR 406
+ W +L+ G ++++ E++ R
Sbjct: 426 VIWRSLLDACCKKG---ASVELSEEIAR 450
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 338 bits (867), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 184/573 (32%), Positives = 314/573 (54%), Gaps = 45/573 (7%)
Query: 59 KMPVLDDAQIMKPSTP--GLC---SQIEKLGLCNRHREAMELFEILELEGDCADVGASTY 113
K+ LD+A + S P C S + +R EA+ F ++ EG + ++
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV--LNEYSF 155
Query: 114 DALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPE 173
++++ C GL + +V + + S F D+Y+ + ++ M+ KCG + DA+++F +M +
Sbjct: 156 ASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD 215
Query: 174 RDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQI 233
R+VVSW ++I +G EA +F M + T A+++ A A L I+VG+++
Sbjct: 216 RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 234 HSCALKMG-VGGDSFVACALIDMYSKCGSIEDAQCAFDQMP------------------- 273
H +K + D ++ A +DMY+KC I++A+ FD MP
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 274 ------------EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRI 321
E+ V WN++IAGY +G +EEALS++ ++ H++ + +++
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 395
Query: 322 CVRLASLEHAKQAHAALVRHGFG------SDIVANTALVDFYSKWGRMEDARHVFDRMHR 375
C LA L QAH +++HGF DI +L+D Y K G +E+ VF +M
Sbjct: 396 CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 455
Query: 376 KNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
++ +SWNA+I G+ +G G +A+++F +ML P+H+T + VLSAC ++G E G
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 436 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHG 495
F SM+RD V P HY CM++LLGR G L+EA ++I P +P +W +LL AC++H
Sbjct: 516 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 575
Query: 496 NLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWI 555
N+ LGK+ AEKL E++P YV+L N+Y GK ++ V ++++++G+ P C+WI
Sbjct: 576 NITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635
Query: 556 EVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEI 588
+++ H F+ DKSH + K+I+ +D ++ E+
Sbjct: 636 KIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 200/392 (51%), Gaps = 65/392 (16%)
Query: 98 ILELEGDCAD-VGASTYDALVNVCVGLR-SIRGVKKVFNYMISSGFEPDLYMMNRVLLMH 155
L+L D + +S + L++ C+ + S V+ V +I SGF ++++ NR++ +
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAY 65
Query: 156 VKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFM-------WVEFND 208
KCG + D R++F MP+R++ +W +V+ GL G EA LF M W
Sbjct: 66 SKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVS 125
Query: 209 GRSR------------------------TFATMVRASAGLGLIQVGRQIHSCALKMGVGG 244
G ++ +FA+++ A +GL + G Q+HS K
Sbjct: 126 GFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLS 185
Query: 245 DSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR 304
D ++ AL+DMYSKCG++ DAQ FD+M ++ V WNS+I + +G + EAL ++ M
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 305 DSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG-FGSDIVANTALVDFYSKWGRM 363
+S + D T++ VI C L++++ ++ H +V++ +DI+ + A VD Y+K R+
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 364 EDARHVFD-------------------------------RMHRKNVISWNALIAGYGNHG 392
++AR +FD +M +NV+SWNALIAGY +G
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 393 QGEQAIQMFEQMLRERVIPNHVTFLAVLSACS 424
+ E+A+ +F + RE V P H +F +L AC+
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 175/351 (49%), Gaps = 43/351 (12%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK------------TTV 278
R +H+ +K G + F+ LID YSKCGS+ED + FD+MP++ T +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 279 G-------------------WNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVI 319
G WNS+++G+A H EEAL + M G ++ ++ + V+
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 320 RICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVI 379
C L + Q H+ + + F SD+ +ALVD YSK G + DA+ VFD M +NV+
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 380 SWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 439
SWN+LI + +G +A+ +F+ ML RV P+ VT +V+SAC+ + G E+ +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 440 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE--PTKNMW--VALLTACRMHG 495
++ K++ + +++ + + EA R F+ P +N+ ++++ M
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEA-----RFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 496 NLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
+ + + K+ E + + ++ L+ Y +G+ +EA + LKR+ +
Sbjct: 335 STKAARLMFTKMAERN---VVSWNALIAGYTQNGENEEALSLFCLLKRESV 382
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 118/280 (42%), Gaps = 70/280 (25%)
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVI---------- 379
+ + HA++++ GF ++I L+D YSK G +ED R VFD+M ++N+
Sbjct: 38 YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 380 ---------------------SWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLA 418
+WN++++G+ H + E+A+ F M +E + N +F +
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 419 VLSACSYSGLSERGWEIFYSMSR------------------------------DHKVKPR 448
VLSACS +G ++ +++ D
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 449 AMHYACMIELLGREGLLDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAE 505
+ + +I + G EA F ++ + EP + ++++AC +++G+
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 506 KLYEMDPGKLCNYVMLLN----IYNSSGKLKEAAGVLQTL 541
++ + D KL N ++L N +Y ++KEA + ++
Sbjct: 278 RVVKND--KLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 172/460 (37%), Positives = 268/460 (58%), Gaps = 6/460 (1%)
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
G QIH G DS + L+D+YS C + DA FD++P++ TV WN + + Y
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 290 HGYSEEALSIYLEMR---DSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
+ + + L ++ +M+ D K D T + ++ C L +L+ KQ H + +G
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
+ + LV YS+ G M+ A VF M +NV+SW ALI+G +G G++AI+ F +ML+
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 407 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM-SRDHKVKPRAMHYACMIELLGREGLL 465
+ P T +LSACS+SGL G F M S + K+KP HY C+++LLGR LL
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLL 371
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIY 525
D+A++LI+ +P +W LL ACR+HG++ELG+ L E+ + +YV+LLN Y
Sbjct: 372 DKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTY 431
Query: 526 NSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEIL 585
++ GK ++ + +K K + P C+ IE++ H F+ D SH + +EIY+ + EI
Sbjct: 432 STVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEIN 491
Query: 586 DEISRHGYIKENEMLLPDVDEEEQR--LQQYHSEKLAIAFGLINTPDWTPLQITQGHRVC 643
++ GY+ E L +++ EE++ +YHSEKLAIAFG++ TP T +++T+ R C
Sbjct: 492 QQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTC 551
Query: 644 GDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
DCHN K ++ V R ++VRD SRFHHF+ +CSC D+W
Sbjct: 552 VDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 19/282 (6%)
Query: 66 AQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRS 125
+Q + P+ + I L E LF L S+ AL C+
Sbjct: 70 SQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL-KCCIKSGD 128
Query: 126 IRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGG 185
+ G ++ + S GF D +M ++ ++ C DA K+F ++P+RD VSW +
Sbjct: 129 LLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSC 188
Query: 186 LVDSGDYSEAFGLFLFMWVEFN-----DGRSRTFATMVRASAGLGLIQVGRQIHSCALKM 240
+ + + LF M + + DG + A ++A A LG + G+Q+H +
Sbjct: 189 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLA--LQACANLGALDFGKQVHDFIDEN 246
Query: 241 GVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIY 300
G+ G ++ L+ MYS+CGS++ A F M E+ V W ++I+G A++G+ +EA+ +
Sbjct: 247 GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAF 306
Query: 301 LEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
EM G + T++ ++ C +H+ LV G
Sbjct: 307 NEMLKFGISPEEQTLTGLLSAC-----------SHSGLVAEG 337
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 140/322 (43%), Gaps = 32/322 (9%)
Query: 204 VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGV--GGDSF------VACALI-- 253
+ + G + +V ++ L L RQIH+ L+ + D F +A +LI
Sbjct: 5 ISSSSGDDHLLSLIVSSTGKLHL----RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPR 60
Query: 254 DMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR-DSGAKIDH 312
D+ C F Q T N++I ++L E ++ +R +S +
Sbjct: 61 DINYSCR-------VFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANP 113
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
+ S ++ C++ L Q H + GF SD + T L+D YS DA VFD
Sbjct: 114 LSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDE 173
Query: 373 MHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER---VIPNHVTFLAVLSACSYSGLS 429
+ +++ +SWN L + Y + + + +F++M + V P+ VT L L AC+ G
Sbjct: 174 IPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGAL 233
Query: 430 ERGWEIFYSMSRDHKVKPRAMHYA-CMIELLGREGLLDEAFALIRRAPFEPTKNMWVALL 488
+ G ++ + D A++ + ++ + R G +D+A+ + E W AL+
Sbjct: 234 DFGKQVHDFI--DENGLSGALNLSNTLVSMYSRCGSMDKAYQVF-YGMRERNVVSWTALI 290
Query: 489 TACRMHGNLELGKFAAEKLYEM 510
+ M+G GK A E EM
Sbjct: 291 SGLAMNG---FGKEAIEAFNEM 309
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/561 (34%), Positives = 309/561 (55%), Gaps = 20/561 (3%)
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF 199
GF D + +N +++ +VK + ARKLF +M E +VVSW +VI G D G A +F
Sbjct: 59 GFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMF 118
Query: 200 LFMW----VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDM 255
M V N+ TFA++ +A + L ++G+ IH+ G+ + V+ +L+DM
Sbjct: 119 QKMHEDRPVPPNE---YTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDM 175
Query: 256 YSKCGSIEDAQCAFDQMPE--KTTVGWNSIIAGYALHGYSEEALSIYLEMRD--SGAKID 311
Y KC +E A+ FD M + V W S+I YA + EA+ ++ + + +
Sbjct: 176 YGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRAN 235
Query: 312 HFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
F ++ VI C L L+ K AH + R G+ S+ V T+L+D Y+K G + A +F
Sbjct: 236 QFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFL 295
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 431
R+ +VIS+ ++I HG GE A+++F++M+ R+ PN+VT L VL ACS+SGL
Sbjct: 296 RIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNE 355
Query: 432 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPF--EPTKNMWVALLT 489
G E M+ + V P + HY C++++LGR G +DEA+ L + E +W ALL+
Sbjct: 356 GLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLS 415
Query: 490 ACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRML 549
A R+HG +E+ A+++L + + Y+ L N Y SG +++ + +KR G
Sbjct: 416 AGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKE 475
Query: 550 PTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGY------IKENEMLLPD 603
C+WIE K + F GD S ++ EI + + ++ + G+ I + + D
Sbjct: 476 RACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVD 535
Query: 604 VDEEEQ-RLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIV 662
VDEE + + H E+LA+A+GL++ P + ++I R+C DCH A KLI+ + REIV
Sbjct: 536 VDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIV 595
Query: 663 VRDASRFHHFRNATCSCGDYW 683
VRD +RFH F+N +C+C DYW
Sbjct: 596 VRDVNRFHCFKNGSCTCRDYW 616
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 156/323 (48%), Gaps = 18/323 (5%)
Query: 233 IHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGY 292
+H+ LK+G D+F L+ Y K I A+ FD+M E V W S+I+GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 293 SEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
+ ALS++ +M D + +T + V + C LA K HA L G +IV ++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 352 ALVDFYSKWGRMEDARHVFDRM--HRKNVISWNALIAGYGNHGQGEQAIQMFEQ----ML 405
+LVD Y K +E AR VFD M + +NV+SW ++I Y + +G +AI++F +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
+R N +V+SACS G + G ++ + + + + ++++ + G L
Sbjct: 231 SDR--ANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLC-NYVMLLNI 524
A + R + + +++ A HG LG+ A + EM G++ NYV LL +
Sbjct: 288 SCAEKIFLRIRCHSVIS-YTSMIMAKAKHG---LGEAAVKLFDEMVAGRINPNYVTLLGV 343
Query: 525 YNS---SGKLKEAAGVLQTLKRK 544
++ SG + E L + K
Sbjct: 344 LHACSHSGLVNEGLEYLSLMAEK 366
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 163/348 (46%), Gaps = 13/348 (3%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ ++ C L R K + + SG ++ + + ++ M+ KC + AR++F M
Sbjct: 133 TFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSM 192
Query: 172 P--ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTF--ATMVRASAGLGLI 227
R+VVSW ++I + EA LF R+ F A+++ A + LG +
Sbjct: 193 IGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRL 252
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
Q G+ H + G ++ VA +L+DMY+KCGS+ A+ F ++ + + + S+I
Sbjct: 253 QWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAK 312
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALV-RHGFGSD 346
A HG E A+ ++ EM ++ T+ V+ C + + + + ++G D
Sbjct: 313 AKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPD 372
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMH---RKNVISWNALIAGYGNHGQGEQAIQMFEQ 403
T +VD ++GR+++A + + + + W AL++ HG+ E + ++
Sbjct: 373 SRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKR 432
Query: 404 MLRERVIPNHVT--FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 449
+++ VT ++A+ +A + SG E + M R VK RA
Sbjct: 433 LIQSN---QQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERA 477
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/503 (36%), Positives = 286/503 (56%), Gaps = 6/503 (1%)
Query: 89 HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMM 148
H+EAMELF + G D+ A + +++ C L ++ +V Y I + D Y+
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACS--SILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSG---DYSEAFGLFLFMWVE 205
N ++ M+ KC + DARK+F DVV + +I G G + EA +F M
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR 448
Query: 206 FNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDA 265
TF +++RASA L + + +QIH K G+ D F ALID+YS C ++D+
Sbjct: 449 LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS 508
Query: 266 QCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRL 325
+ FD+M K V WNS+ AGY +EEAL+++LE++ S + D FT + ++ L
Sbjct: 509 RLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNL 568
Query: 326 ASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALI 385
AS++ ++ H L++ G + AL+D Y+K G EDA FD ++V+ WN++I
Sbjct: 569 ASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI 628
Query: 386 AGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 445
+ Y NHG+G++A+QM E+M+ E + PN++TF+ VLSACS++GL E G + F M R +
Sbjct: 629 SSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGI 687
Query: 446 KPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAE 505
+P HY CM+ LLGR G L++A LI + P +P +W +LL+ C GN+EL + AAE
Sbjct: 688 EPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAE 747
Query: 506 KLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFL 565
DP ++ ML NIY S G EA V + +K +G+ P +WI + K+ H FL
Sbjct: 748 MAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFL 807
Query: 566 CGDKSHTQTKEIYQKVDEILDEI 588
DKSH + +IY+ +D++L +I
Sbjct: 808 SKDKSHCKANQIYEVLDDLLVQI 830
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 162/300 (54%), Gaps = 11/300 (3%)
Query: 132 VFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGD 191
V +I G E D Y+ N ++ ++ + G M+ ARK+F MPER++VSW T++ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 192 YSEAFGLFLFMWVEFNDGRSR-TFATMVRASAGLGLIQVGR------QIHSCALKMGVGG 244
Y E+ +FL W D + ++ ++A +GL GR Q+ S +K G
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD----GRGRWMVFQLQSFLVKSGFDR 181
Query: 245 DSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR 304
D +V LID Y K G+I+ A+ FD +PEK+TV W ++I+G G S +L ++ ++
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 305 DSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRME 364
+ D + +S V+ C L LE KQ HA ++R+G D L+D Y K GR+
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 365 DARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS 424
A +F+ M KN+ISW L++GY + ++A+++F M + + P+ ++L++C+
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 169/319 (52%), Gaps = 13/319 (4%)
Query: 115 ALVNVCVGLRSIRGVKKVF---NYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
+ + C GL RG VF ++++ SGF+ D+Y+ ++ ++K G + AR +F +
Sbjct: 151 SFIQACSGLDG-RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDAL 209
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN---DGRSRTFATMVRASAGLGLIQ 228
PE+ V+W T+I G V G + LF + +E N DG +T++ A + L ++
Sbjct: 210 PEKSTVTWTTMISGCVKMGRSYVSLQLF-YQLMEDNVVPDGY--ILSTVLSACSILPFLE 266
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
G+QIH+ L+ G+ D+ + LID Y KCG + A F+ MP K + W ++++GY
Sbjct: 267 GGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK 326
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
+ +EA+ ++ M G K D + S ++ C L +L Q HA ++ G+D
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY---GNHGQGEQAIQMFEQML 405
+L+D Y+K + DAR VFD +V+ +NA+I GY G + +A+ +F M
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 406 RERVIPNHVTFLAVLSACS 424
+ P+ +TF+++L A +
Sbjct: 447 FRLIRPSLLTFVSLLRASA 465
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 122/227 (53%), Gaps = 3/227 (1%)
Query: 212 RTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQ 271
R FA +++ A L+ +H + G+ D++++ LI++YS+ G + A+ F++
Sbjct: 45 REFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEK 104
Query: 272 MPEKTTVGWNSIIAGYALHGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEH 330
MPE+ V W+++++ HG EE+L ++LE R + + +S I+ C L
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGR 164
Query: 331 --AKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
Q + LV+ GF D+ T L+DFY K G ++ AR VFD + K+ ++W +I+G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
G+ ++Q+F Q++ + V+P+ VLSACS E G +I
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI 271
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 196/603 (32%), Positives = 329/603 (54%), Gaps = 16/603 (2%)
Query: 88 RHREAMELFEILELEGDCAD--VGASTYDALVNVCVGLRSIR--GVKKVFNYMISSGFEP 143
R +EA+E++ ++ D +S + A ++ + + R G+ + +S
Sbjct: 145 RSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVS----- 199
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
++++ + ++ M+VK G +A+ + + E+DVV +I G G+ +EA F M
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 204 VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIE 263
VE T+A+++ + L I G+ IH +K G +L+ MY +C ++
Sbjct: 260 VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVD 319
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
D+ F + V W S+I+G +G E AL + +M K + FT+S +R C
Sbjct: 320 DSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCS 379
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
LA E +Q H + ++GF D A + L+D Y K G + AR VFD + +VIS N
Sbjct: 380 NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNT 439
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
+I Y +G G +A+ +FE+M+ + PN VT L+VL AC+ S L E G E+F S +D
Sbjct: 440 MIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD- 498
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
K+ HYACM++LLGR G L+EA ++ P +W LL+AC++H +E+ +
Sbjct: 499 KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERI 557
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHA 563
K+ E++PG +++ N+Y S+GK + +K L+ P +W+E+ K+ H
Sbjct: 558 TRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHT 617
Query: 564 FLCGDK-SHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDE--EEQRLQQYHSEKLA 620
F+ GD SH +++I + ++E++ + GY+++ + D++E +E+ L Q HSEKLA
Sbjct: 618 FMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQ-HSEKLA 676
Query: 621 IAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCG 680
IAF + + ++I + RVC DCH+ IK+++ V REI+ RD+ RFHHFR+ +CSCG
Sbjct: 677 IAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCG 735
Query: 681 DYW 683
DYW
Sbjct: 736 DYW 738
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 6/299 (2%)
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
+ F+ ++R I + I + LK G + L+D KCG I+ A+ FD
Sbjct: 65 THNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFD 123
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEH 330
M E+ V WNS+IA H S+EA+ +Y M + D +T+S V + L+ +
Sbjct: 124 GMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKE 183
Query: 331 AKQAHAALVRHGFG-SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
A+++H V G S++ +ALVD Y K+G+ +A+ V DR+ K+V+ ALI GY
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 243
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG-WEIFYSMSRDHKVKPR 448
G+ +A++ F+ ML E+V PN T+ +VL +C L + G ++ + + +
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISC--GNLKDIGNGKLIHGLMVKSGFESA 301
Query: 449 AMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
++ + R L+D++ + + + P + W +L++ +G E+ K+
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGREEMALIEFRKM 359
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 10/221 (4%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP 143
GL RE M L E ++ D + T + + C L +++ + GF+
Sbjct: 342 GLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR 401
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF---L 200
D Y + ++ ++ KCG AR +F + E DV+S T+I +G EA LF +
Sbjct: 402 DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI 461
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSC--ALKMGVGGDSFVACALIDMYSK 258
+ ++ ND T +++ A L++ G ++ K+ + D + AC ++D+ +
Sbjct: 462 NLGLQPND---VTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHY-AC-MVDLLGR 516
Query: 259 CGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSI 299
G +E+A+ ++ V W ++++ +H E A I
Sbjct: 517 AGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERI 557
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 280/507 (55%), Gaps = 40/507 (7%)
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYS--------------- 257
T +V+A GL + + G Q+H ++ G D V LI +Y+
Sbjct: 110 TVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSI 169
Query: 258 ----------------KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYL 301
+CG + A+ F+ MPE+ + WN++I+GYA G S EAL+++
Sbjct: 170 PCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFH 229
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
M+ G K++ + V+ C +L +L+ + AH+ + R+ + T LVD Y+K G
Sbjct: 230 LMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCG 289
Query: 362 RMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS 421
ME A VF M KNV +W++ + G +G GE+ +++F M ++ V PN VTF++VL
Sbjct: 290 DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR 349
Query: 422 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTK 481
CS G + G F SM + ++P+ HY C+++L R G L++A ++I++ P +P
Sbjct: 350 GCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHA 409
Query: 482 NMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
+W +LL A RM+ NLELG A++K+ E++ YV+L NIY S + V Q++
Sbjct: 410 AVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSM 469
Query: 542 KRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRH----GYIKEN 597
K KG+R P C+ +EV + H F GDKSH + Y ++D + +ISR GY +
Sbjct: 470 KSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPK----YTQIDAVWKDISRRLRLAGYKADT 525
Query: 598 EMLLPDVDEEEQRLQQ-YHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMV 656
++ D+DEEE+ HSEK AIAFG+++ + P++I + RVCGDCH +I+ +
Sbjct: 526 TPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKI 585
Query: 657 TGREIVVRDASRFHHFRNATCSCGDYW 683
REI+VRD +RFHHF++ CSC +W
Sbjct: 586 FNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 174/398 (43%), Gaps = 38/398 (9%)
Query: 54 EYVDRKMPVLDDAQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTY 113
+Y+D +LD ++ KP+ L S I ++ + + + G+ T
Sbjct: 54 KYLDYANQILDRSE--KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTV 111
Query: 114 DALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHV----------------- 156
+ LV C GLR +V I GF+ D ++ ++ ++
Sbjct: 112 NFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPC 171
Query: 157 --------------KCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFM 202
+CG ++ ARKLF MPERD ++W +I G G+ EA +F M
Sbjct: 172 PDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLM 231
Query: 203 WVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSI 262
+E +++ A LG + GR HS + + +A L+D+Y+KCG +
Sbjct: 232 QLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDM 291
Query: 263 EDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC 322
E A F M EK W+S + G A++G+ E+ L ++ M+ G + T V+R C
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGC 351
Query: 323 VRLASLEHAKQAHAALVRHGFGSD--IVANTALVDFYSKWGRMEDARHVFDRMHRK-NVI 379
+ ++ Q H +R+ FG + + LVD Y++ GR+EDA + +M K +
Sbjct: 352 SVVGFVDEG-QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAA 410
Query: 380 SWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
W++L+ + E + ++ML E NH ++
Sbjct: 411 VWSSLLHASRMYKNLELGVLASKKML-ELETANHGAYV 447
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 166/391 (42%), Gaps = 84/391 (21%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIED------AQCAFDQMPEKTTVGWNSII 284
RQIH+ G D L+ + K ++ D A D+ + T NS+I
Sbjct: 23 RQIHAKLYVDGTLKDDH----LVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 285 AGYALHGYSEEALSIYLEMRDSGA--KIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
+ E++ Y + SG K D++T++ +++ C L E Q H +R G
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 343 FGSDIVANTALVDFYSKWGRMED-------------------------------ARHVFD 371
F +D T L+ Y++ G ++ AR +F+
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 431
M ++ I+WNA+I+GY G+ +A+ +F M E V N V ++VLSAC+ G ++
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 432 G-WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---------------------- 468
G W +S +K+K +++L + G +++A
Sbjct: 259 GRWA--HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGL 316
Query: 469 ------------FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL---YEMDPG 513
F+L+++ P +V++L C + G ++ G+ + + + ++P
Sbjct: 317 AMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEP- 375
Query: 514 KLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
+L +Y L+++Y +G+L++A ++Q + K
Sbjct: 376 QLEHYGCLVDLYARAGRLEDAVSIIQQMPMK 406
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/609 (32%), Positives = 318/609 (52%), Gaps = 43/609 (7%)
Query: 115 ALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVK-------CGLMLDARKL 167
AL+ C S +K + +++ + D+++ +R+L + V L+ A +
Sbjct: 17 ALLQSC---SSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 168 FGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
F + ++ + +I + S+AFG + M + TF +++AS+ + +
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYS------------------------------ 257
VG Q HS ++ G D +V +L+ MY+
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 258 -KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTIS 316
KCG +E+A+ FD+MP + W+ +I GYA + E+A+ ++ M+ G + +
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
VI C L +LE ++A+ +V+ +++ TALVD + + G +E A HVF+ +
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 436
+ +SW+++I G HG +A+ F QM+ IP VTF AVLSACS+ GL E+G EI+
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 437 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGN 496
+M +DH ++PR HY C++++LGR G L EA I + +P + ALL AC+++ N
Sbjct: 374 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 433
Query: 497 LELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIE 556
E+ + L ++ P YV+L NIY +G+ + + +K K ++ P + IE
Sbjct: 434 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
Query: 557 VKKQPHAFLCG-DKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQ-QY 614
+ + + F G D+ H + +I +K +EIL +I GY DVDEEE+
Sbjct: 494 IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHM 553
Query: 615 HSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRN 674
HSEKLAIA+G++ T T ++I + RVC DCH KLI+ V GRE++VRD +RFHHFRN
Sbjct: 554 HSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRN 613
Query: 675 ATCSCGDYW 683
CSC DYW
Sbjct: 614 GVCSCRDYW 622
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 158/349 (45%), Gaps = 38/349 (10%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ L+ + + ++ + ++ GF+ D+Y+ N ++ M+ CG + A ++FG M
Sbjct: 119 TFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM 178
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLF-------LFMWVEFNDGRSR------------ 212
RDVVSW +++ G G A +F LF W +G ++
Sbjct: 179 GFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 238
Query: 213 ------------TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG 260
+++ + A LG ++ G + + +K + + + AL+DM+ +CG
Sbjct: 239 FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCG 298
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
IE A F+ +PE ++ W+SII G A+HG++ +A+ + +M G T + V+
Sbjct: 299 DIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358
Query: 321 ICVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-NV 378
C +E + + + + HG + +VD + G++ +A + +MH K N
Sbjct: 359 ACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNA 418
Query: 379 ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS---ACS 424
AL+ + E A ++ ++ +V P H + +LS AC+
Sbjct: 419 PILGALLGACKIYKNTEVAERVGNMLI--KVKPEHSGYYVLLSNIYACA 465
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 299/552 (54%), Gaps = 29/552 (5%)
Query: 63 LDDAQIMKPSTPGLCSQIEKLGLCNRHRE-----AMELFEILELEGDCADVGASTYDALV 117
+ DAQI+ ++ L Q + +E A+ LF L G D + +
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFD--EISLSGVF 389
Query: 118 NVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVV 177
C ++ + +++ I S D+ + N + M+ KC + +A ++F +M RD V
Sbjct: 390 RACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAV 449
Query: 178 SWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCA 237
SW +I +G E LF+ M + TF ++++A G G + G +IHS
Sbjct: 450 SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSI 508
Query: 238 LKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG------------------ 279
+K G+ +S V C+LIDMYSKCG IE+A+ + ++ V
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMC 568
Query: 280 --WNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAA 337
WNSII+GY + SE+A ++ M + G D FT + V+ C LAS KQ HA
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ 628
Query: 338 LVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQA 397
+++ SD+ + LVD YSK G + D+R +F++ R++ ++WNA+I GY +HG+GE+A
Sbjct: 629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 398 IQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIE 457
IQ+FE+M+ E + PNHVTF+++L AC++ GL ++G E FY M RD+ + P+ HY+ M++
Sbjct: 689 IQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVD 748
Query: 458 LLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMH-GNLELGKFAAEKLYEMDPGKLC 516
+LG+ G + A LIR PFE +W LL C +H N+E+ + A L +DP
Sbjct: 749 ILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSS 808
Query: 517 NYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKE 576
Y +L N+Y +G ++ + + + ++ L+ P C+W+E+K + H FL GDK+H + +E
Sbjct: 809 AYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEE 868
Query: 577 IYQKVDEILDEI 588
IY+++ I E+
Sbjct: 869 IYEELGLIYSEM 880
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 197/379 (51%), Gaps = 6/379 (1%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+++E+F + EG + T+ ++ VC L ++ ++ G + D+ +
Sbjct: 163 KSIEVFVDMGREG--IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASA 220
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
+L M+ K +++ ++F +PE++ VSW +I G V + S A F M + N G
Sbjct: 221 LLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ-KVNAGV 279
Query: 211 SRT-FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
S++ +A+++R+ A L +++G Q+H+ ALK D V A +DMY+KC +++DAQ F
Sbjct: 280 SQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF 339
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
D +N++I GY+ + +AL ++ + SG D ++S V R C + L
Sbjct: 340 DNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLS 399
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
Q + ++ D+ A +D Y K + +A VFD M R++ +SWNA+IA +
Sbjct: 400 EGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 449
+G+G + + +F MLR R+ P+ TF ++L AC+ L G EI S+ + +
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLG-YGMEIHSSIVKSGMASNSS 518
Query: 450 MHYACMIELLGREGLLDEA 468
+ +I++ + G+++EA
Sbjct: 519 VG-CSLIDMYSKCGMIEEA 536
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 193/424 (45%), Gaps = 43/424 (10%)
Query: 108 VGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHV----------- 156
V + + + C ++ K+ +MI SGF P +++N +L ++
Sbjct: 46 VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 157 --------------------KCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAF 196
K M A F MP RDVVSW +++ G + +G+ ++
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 197 GLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMY 256
+F+ M E + RTFA +++ + L +G QIH +++G D A AL+DMY
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 257 SKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTIS 316
+K ++ F +PEK +V W++IIAG + AL + EM+ A + +
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
V+R C L+ L Q HA ++ F +D + TA +D Y+K M+DA+ +FD
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSY-SGLSE----R 431
N S+NA+I GY G +A+ +F +++ + + ++ V AC+ GLSE
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 432 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTAC 491
G I S+S D V A I++ G+ L EAF + + W A++ A
Sbjct: 406 GLAIKSSLSLDVCVANAA------IDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAH 458
Query: 492 RMHG 495
+G
Sbjct: 459 EQNG 462
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 33/267 (12%)
Query: 195 AFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALID 254
+F F + N + F+ + + A G +++G+Q H+ + G +FV L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 255 MYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA-------------------------- 288
+Y+ A FD+MP + V WN +I GY+
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 289 LHGY-----SEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
L GY S +++ ++++M G + D T +I++++C L Q H +VR G
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQ 403
+D+VA +AL+D Y+K R ++ VF + KN +SW+A+IAG + A++ F++
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 271
Query: 404 MLRERVIPNHVTFLAVLSACSYSGLSE 430
M + + + +VL +C + LSE
Sbjct: 272 MQKVNAGVSQSIYASVLRSC--AALSE 296
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 122/337 (36%), Gaps = 80/337 (23%)
Query: 296 ALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVD 355
+ S + + + + S V + C + +LE KQAHA ++ GF L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 356 FYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG-------------------------- 389
Y+ A VFD+M ++V+SWN +I GY
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 390 -----NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 444
+G+ ++I++F M RE + + TF +L CS+ + G +I H
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI-------HG 204
Query: 445 VKPRAMHYACMIELLGREGLLD---------EAFALIRRAPFEPTKNMWVALLTACRMHG 495
+ R C +++ LLD E+ + + P E W A++ C +
Sbjct: 205 IVVRV---GCDTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNN 260
Query: 496 NLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWI 555
L L A + EM K AGV Q++ LR + +
Sbjct: 261 LLSL---ALKFFKEMQ--------------------KVNAGVSQSIYASVLRSCAALSEL 297
Query: 556 EVKKQPHA------FLCGDKSHTQTKEIYQKVDEILD 586
+ Q HA F T T ++Y K D + D
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQD 334
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 321 bits (823), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/514 (33%), Positives = 281/514 (54%)
Query: 88 RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
R+RE F +L+ +T +++VC K + I SG++ ++ +
Sbjct: 133 RNRETESGFVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISV 192
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
N+++ + KCG + R +F M R+V++ VI GL+++ + + LF M
Sbjct: 193 GNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLV 252
Query: 208 DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQC 267
S T+ + + A +G I G+QIH+ K G+ + + AL+DMYSKCGSIEDA
Sbjct: 253 HPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWT 312
Query: 268 AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLAS 327
F+ E V I+ G A +G EEA+ ++ M +G +ID +S V+ + S
Sbjct: 313 IFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNS 372
Query: 328 LEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAG 387
L KQ H+ +++ F + N L++ YSK G + D++ VF RM ++N +SWN++IA
Sbjct: 373 LGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAA 432
Query: 388 YGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 447
+ HG G A++++E+M V P VTFL++L ACS+ GL ++G E+ M H ++P
Sbjct: 433 FARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEP 492
Query: 448 RAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
R HY C+I++LGR GLL EA + I P +P +W ALL AC HG+ E+G++AAE+L
Sbjct: 493 RTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQL 552
Query: 508 YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCG 567
++ P ++++ NIY+S GK KE A ++ +K G+ + IE++ + H+F+
Sbjct: 553 FQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVE 612
Query: 568 DKSHTQTKEIYQKVDEILDEISRHGYIKENEMLL 601
DK H Q + IY + + + GY + +L
Sbjct: 613 DKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFIL 646
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 163/366 (44%), Gaps = 9/366 (2%)
Query: 145 LYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWV 204
L + N +L ++ KCG ++DA KLF +MP RDV+S V G + + + F L M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 205 EFN-DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIE 263
D + T V + L V + IH+ A+ G + V LI Y KCG
Sbjct: 150 SGGFDHATLTIVLSVCDTPEFCL--VTKMIHALAILSGYDKEISVGNKLITSYFKCGCSV 207
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
+ FD M + + ++I+G + E+ L ++ MR + T + C
Sbjct: 208 SGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACS 267
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
+ +Q HA L ++G S++ +AL+D YSK G +EDA +F+ + +S
Sbjct: 268 GSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTV 327
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
++ G +G E+AIQ F +ML+ V + AVL G ++ +S+
Sbjct: 328 ILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQL-HSLVIKR 386
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
K +I + + G L ++ + RR P + W +++ A HG+ A
Sbjct: 387 KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGH----GLA 441
Query: 504 AEKLYE 509
A KLYE
Sbjct: 442 ALKLYE 447
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/577 (32%), Positives = 301/577 (52%), Gaps = 12/577 (2%)
Query: 116 LVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVL-LMHVKCGLMLDARKLFGDMPER 174
+V + G S++ ++K+ +++I +G + + N +L V L +L D +
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 175 D--VVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR----TFATMVRASAGLGLIQ 228
D W +I G +S S LF SR TF +++ + I
Sbjct: 68 DPSTSDWNYLIRGFSNS---SSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIP 124
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
+IH ++ G D+ VA +L+ YS GS+E A FD+MP + V WN +I ++
Sbjct: 125 KCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFS 184
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
G +ALS+Y M + G D +T+ ++ C +++L H S +
Sbjct: 185 HVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVF 244
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
+ AL+D Y+K G +E+A VF+ M +++V++WN++I GYG HG G +AI F +M+
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 409 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
V PN +TFL +L CS+ GL + G E F MS + P HY CM++L GR G L+ +
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 469 FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSS 528
+I + +W LL +C++H NLELG+ A +KL +++ +YV++ +IY+++
Sbjct: 365 LEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAA 424
Query: 529 GKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEI 588
+ A + + ++ L+ +P +WIE+ Q H F+ DK H ++ IY ++ E+++
Sbjct: 425 NDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRA 484
Query: 589 SRHGYIKE--NEMLLPDVDEEEQRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDC 646
GY E N D HSEKLAIA+GL+ T T L+IT+ RVC DC
Sbjct: 485 ILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDC 544
Query: 647 HNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
H+ K ++ REI+VRD RFHHF + CSC DYW
Sbjct: 545 HSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 147/309 (47%), Gaps = 27/309 (8%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T++ + C ++SI ++ +I SGF D + ++ + G + A K+F +M
Sbjct: 109 TFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEM 168
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
P RD+VSW +I G +++A ++ M E G S T ++ + A + + +G
Sbjct: 169 PVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGV 228
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
+H A + FV+ ALIDMY+KCGS+E+A F+ M ++ + WNS+I GY +HG
Sbjct: 229 MLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG 288
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG--------- 342
+ EA+S + +M SG + + T ++ C +H LV+ G
Sbjct: 289 HGVEAISFFRKMVASGVRPNAITFLGLLLGC-----------SHQGLVKEGVEHFEIMSS 337
Query: 343 ---FGSDIVANTALVDFYSKWGRMEDA-RHVFDRMHRKNVISWNALIAGYGNHGQ---GE 395
++ +VD Y + G++E++ ++ ++ + W L+ H GE
Sbjct: 338 QFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGE 397
Query: 396 QAIQMFEQM 404
A++ Q+
Sbjct: 398 VAMKKLVQL 406
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/565 (32%), Positives = 289/565 (51%), Gaps = 39/565 (6%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A+E F L EG+ ++ T+ +++ C + + R +V ++ SGF+ ++Y+ +
Sbjct: 210 KAIECFRDLRREGNQSN--QYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSA 267
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ M+ KC M AR L M DVVSW ++I G V G EA +F M
Sbjct: 268 LIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKID 327
Query: 211 SRTFATMVRASA-GLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
T +++ A +++ H +K G V AL+DMY+K G ++ A F
Sbjct: 328 DFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVF 387
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
+ M EK + W +++ G +G +EAL ++ MR G D + V+ L LE
Sbjct: 388 EGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLE 447
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
+Q H ++ GF S + N +LV Y+K G +EDA +F+ M +++I+W LI GY
Sbjct: 448 FGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA 507
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 449
+G E A + F+ SM + + P
Sbjct: 508 KNGLLEDAQRYFD-----------------------------------SMRTVYGITPGP 532
Query: 450 MHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYE 509
HYACMI+L GR G + L+ + EP +W A+L A R HGN+E G+ AA+ L E
Sbjct: 533 EHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLME 592
Query: 510 MDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDK 569
++P YV L N+Y+++G+ EAA V + +K + + P C+W+E K + H+F+ D+
Sbjct: 593 LEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDR 652
Query: 570 SHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIAFGLINT 628
H + EIY KVDE++ I GY + L D+D+E + L YHSEKLA+AFGL+
Sbjct: 653 RHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVV 712
Query: 629 PDWTPLQITQGHRVCGDCHNAIKLI 653
P P++I + RVCGDCH+A+KL+
Sbjct: 713 PSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 182/383 (47%), Gaps = 4/383 (1%)
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLF 201
E D + N +++ + + DA KLF P ++ +SW +I G SG EAF LF
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 202 MWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGS 261
M + T +++R L L+ G QIH +K G D V L+ MY++C
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 262 IEDAQCAFDQMP-EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
I +A+ F+ M EK V W S++ GY+ +G++ +A+ + ++R G + + +T V+
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
C +++ Q H +V+ GF ++I +AL+D Y+K ME AR + + M +V+S
Sbjct: 236 ACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVS 295
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 440
WN++I G G +A+ MF +M + + T ++L+ + S + + +
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI 355
Query: 441 RDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE-- 498
+ ++++ + G++D A + E W AL+T +G+ +
Sbjct: 356 VKTGYATYKLVNNALVDMYAKRGIMDSALKVF-EGMIEKDVISWTALVTGNTHNGSYDEA 414
Query: 499 LGKFAAEKLYEMDPGKLCNYVML 521
L F ++ + P K+ +L
Sbjct: 415 LKLFCNMRVGGITPDKIVTASVL 437
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 185/608 (30%), Positives = 303/608 (49%), Gaps = 71/608 (11%)
Query: 147 MMNRVLLMHVKCGLMLDAR----KLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFM 202
+ +RV V C +L + +F + ER+ +I GL ++ + + F+ M
Sbjct: 58 LSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILM 117
Query: 203 WVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSI 262
TF ++++++ LG +GR +H+ LK V DSFV +L+DMY+K G +
Sbjct: 118 LRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQL 177
Query: 263 EDAQCAFDQ-----------------------------------MPEKTTVGWNSIIAGY 287
+ A F++ MPE+ + W+++I GY
Sbjct: 178 KHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGY 237
Query: 288 A--------------------------LHGYS-----EEALSIYLEMRDSGAKIDHFTIS 316
++G+S E A+S Y EM + G K + +TI+
Sbjct: 238 VDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIA 297
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
V+ C + +L + H ++ +G D TALVD Y+K G ++ A VF M+ K
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK 357
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 436
+++SW A+I G+ HG+ QAIQ F QM+ P+ V FLAVL+AC S + G F
Sbjct: 358 DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFF 417
Query: 437 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGN 496
SM D+ ++P HY +++LLGR G L+EA L+ P P W AL AC+ H
Sbjct: 418 DSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKG 477
Query: 497 LELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIE 556
+ ++ L E+DP +Y+ L + S G +++ +L+++ ++IE
Sbjct: 478 YRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIE 537
Query: 557 VKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEE-QRLQQYH 615
+ Q + F GD SH T+EI K+DEI+ + GY + + D++EEE + + H
Sbjct: 538 LDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIH 597
Query: 616 SEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNA 675
SEKLA+ G + T T ++I + R+CGDCH+ +K ++ ++ R+I++RDA +FHHF++
Sbjct: 598 SEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDG 657
Query: 676 TCSCGDYW 683
CSCGDYW
Sbjct: 658 RCSCGDYW 665
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 202/640 (31%), Positives = 321/640 (50%), Gaps = 77/640 (12%)
Query: 115 ALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD-----ARKLFG 169
+L+N C LR++ + +F I G + D Y +++L C + + AR+L
Sbjct: 10 SLLNSCKNLRALTQIHGLF---IKYGVDTDSYFTGKLIL---HCAISISDALPYARRLLL 63
Query: 170 DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVE-FNDGRSRTFATMVRASAGLGLIQ 228
PE D + T++ G +S + + +F+ M + F S +FA +++A ++
Sbjct: 64 CFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLR 123
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSII---- 284
G Q+H ALK G+ FV LI MY CG +E A+ FD+M + V WN++I
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACF 183
Query: 285 ---------------------------AGYALHGYSEEALSIYLEM--RD---------- 305
AGY G E A I+ EM RD
Sbjct: 184 RGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVG 243
Query: 306 -------------------SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
+G + +++ V+ C + S E K H + + G+
Sbjct: 244 IAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWI 303
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKN-VISWNALIAGYGNHGQGEQAIQMFEQML 405
+ N AL+D YS+ G + AR VF+ M K ++SW ++IAG HGQGE+A+++F +M
Sbjct: 304 VSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMT 363
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
V P+ ++F+++L ACS++GL E G + F M R + ++P HY CM++L GR G L
Sbjct: 364 AYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIY 525
+A+ I + P PT +W LL AC HGN+EL + ++L E+DP + V+L N Y
Sbjct: 424 QKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAY 483
Query: 526 NSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEIL 585
++GK K+ A + +++ + ++ + +EV K + F G+K E ++K+ EI+
Sbjct: 484 ATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEII 543
Query: 586 DEIS-RHGYIKENEMLLPDVDEEEQRLQ-QYHSEKLAIAFGLINTPDWTPLQITQGHRVC 643
+ GY E L DV+EEE+ Q HSEKLA+AF L ++I + R+C
Sbjct: 544 LRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRIC 603
Query: 644 GDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
DCH +KL + V G EI+VRD +RFH F++ +CSC DYW
Sbjct: 604 RDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 311 bits (797), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 256/452 (56%), Gaps = 2/452 (0%)
Query: 135 YMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSE 194
+++ G + D ++ N ++ + GL A +LF ++DVV+W +I G V +G SE
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASE 187
Query: 195 AFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMG-VGGDSFVACALI 253
A F+ M T ++++A+ + ++ GR +H L+ G V D F+ +L+
Sbjct: 188 AMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLV 247
Query: 254 DMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHF 313
DMY KC +DAQ FD+MP + V W ++IAGY ++ + ++ EM S +
Sbjct: 248 DMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEK 307
Query: 314 TISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM 373
T+S V+ C + +L ++ H ++++ + A T L+D Y K G +E+A VF+R+
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL 367
Query: 374 HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 433
H KNV +W A+I G+ HG A +F ML V PN VTF+AVLSAC++ GL E G
Sbjct: 368 HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGR 427
Query: 434 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRM 493
+F SM ++P+A HYACM++L GR+GLL+EA ALI R P EPT +W AL +C +
Sbjct: 428 RLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLL 487
Query: 494 HGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCT 553
H + ELGK+AA ++ ++ P Y +L N+Y+ S E A V + +K + + P +
Sbjct: 488 HKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFS 547
Query: 554 WIEVKKQPHAFLC-GDKSHTQTKEIYQKVDEI 584
WIEVK + F+ DK ++ ++Y+ +D +
Sbjct: 548 WIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 166/348 (47%), Gaps = 40/348 (11%)
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
Q H+ +K G+ D FV +LI YS G + A FD +K V W ++I G+ +G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG-FGSDIVAN 350
+ EA+ ++EM+ +G + T+ V++ ++ + + H + G D+
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 351 TALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI 410
++LVD Y K +DA+ VFD M +NV++W ALIAGY ++ + +FE+ML+ V
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 411 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 470
PN T +VLSAC++ G RG + M ++ ++ +I+L + G L+EA
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKN-SIEINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 471 LIRR----------------------------------APFEPTKNMWVALLTACRMHGN 496
+ R + P + ++A+L+AC G
Sbjct: 363 VFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGL 422
Query: 497 LELGK---FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
+E G+ + + + M+P K +Y +++++ G L+EA +++ +
Sbjct: 423 VEEGRRLFLSMKGRFNMEP-KADHYACMVDLFGRKGLLEEAKALIERM 469
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+ M +FE + L+ D A T ++++ C + ++ ++V YMI + E +
Sbjct: 289 KGMLVFEEM-LKSDVAP-NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTT 346
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ ++VKCG + +A +F + E++V +W +I G G +AF LF M
Sbjct: 347 LIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPN 406
Query: 211 SRTFATMVRASAGLGLIQVGRQIH---SCALKMGVGGDSFVACALIDMYSKCGSIEDAQC 267
TF ++ A A GL++ GR++ M D + AC ++D++ + G +E+A+
Sbjct: 407 EVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY-AC-MVDLFGRKGLLEEAKA 464
Query: 268 AFDQMP-EKTTVGWNSIIAGYALH 290
++MP E T V W ++ LH
Sbjct: 465 LIERMPMEPTNVVWGALFGSCLLH 488
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 311 bits (797), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 286/525 (54%), Gaps = 3/525 (0%)
Query: 88 RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
R EA+++F + E + + A+++ + +++ I +G + +
Sbjct: 199 RVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVAL 258
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
N ++ M+ KC + +A K+F +R+ ++W ++ G +G+ EA LF M+
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318
Query: 208 DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQC 267
T ++ A + + ++ G+Q+HS LK+G F AL+DMY+K G + DA+
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARK 378
Query: 268 AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLAS 327
FD + E+ W S+I+GY + +EEAL +Y M+ +G + T++ V++ C LA+
Sbjct: 379 GFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438
Query: 328 LEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAG 387
LE KQ H ++HGFG ++ +AL YSK G +ED VF R K+V+SWNA+I+G
Sbjct: 439 LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG 498
Query: 388 YGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 447
++GQG++A+++FE+ML E + P+ VTF+ ++SACS+ G ERGW F MS + P
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP 558
Query: 448 RAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
+ HYACM++LL R G L EA I A + +W LL+AC+ HG ELG +A EKL
Sbjct: 559 KVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKL 618
Query: 508 YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCG 567
+ + YV L IY + G++++ V + ++ G+ C+WIE+K Q H F+ G
Sbjct: 619 MALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVG 678
Query: 568 DKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQ 612
D H +E V + ++ G++ +L EEE+ Q
Sbjct: 679 DTMHPMIEETKDLVCLVSRQMIEEGFVT---VLDSSFVEEEEGTQ 720
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 194/418 (46%), Gaps = 42/418 (10%)
Query: 124 RSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVI 183
R++ + V +I +G + N ++ + KCG + A +F + +DVVSW ++I
Sbjct: 28 RNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLI 87
Query: 184 GGLVDSGDYSEAFGLF-LFMWVEFND--GRSRTFATMVRASAGLGLIQVGRQIHSCALKM 240
G +G S ++ + LF + D + T A + +A + L VGRQ H+ +KM
Sbjct: 88 TGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 241 GVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSI- 299
GD +V +L+ MY K G +ED F MPE+ T W+++++GYA G EEA+ +
Sbjct: 148 SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 300 --YLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFY 357
+L ++ G+ D+ +++ + + + +Q H +++G + + ALV Y
Sbjct: 208 NLFLREKEEGSDSDYVFTAVLSSLAATIY-VGLGRQIHCITIKNGLLGFVALSNALVTMY 266
Query: 358 SKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
SK + +A +FD +N I+W+A++ GY +G+ +A+++F +M + P+ T +
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIV 326
Query: 418 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL------------ 465
VL+ACS E G ++ +S + ++++ + G L
Sbjct: 327 GVLNACSDICYLEEGKQL-HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 466 -------------------DEAFALIRR---APFEPTKNMWVALLTACRMHGNLELGK 501
+EA L RR A P ++L AC LELGK
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 443
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/575 (31%), Positives = 315/575 (54%), Gaps = 27/575 (4%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKC---GLMLDARKLFGDMPERDVVSWMTVIGGL 186
K+V + G +Y+ N V+ M+ +C +A +F + +++V+W ++I
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 187 VDSGDYSEAFGLFLFMW---VEFNDGRSRTFATMVRASAGLGLIQVGR---QIHSCALKM 240
+A G+F+ M V F+ + + S+ L +V + Q+HS +K
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKS 296
Query: 241 GVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE----KTTVGWNSIIAGYALHGYSEEA 296
G+ + VA ALI +YS+ +ED + E + V WN II +A++ E A
Sbjct: 297 GLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERA 353
Query: 297 LSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDF 356
+ ++ ++R D +T S V++ C L + HA HA +++ GF +D V N +L+
Sbjct: 354 IHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHA 413
Query: 357 YSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTF 416
Y+K G ++ VFD M ++V+SWN+++ Y HGQ + + +F++M + P+ TF
Sbjct: 414 YAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATF 470
Query: 417 LAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAP 476
+A+LSACS++G E G IF SM + P+ HYAC+I++L R EA +I++ P
Sbjct: 471 IALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMP 530
Query: 477 FEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM-DPGKLCNYVMLLNIYNSSGKLKEAA 535
+P +W+ALL +CR HGN LGK AA+KL E+ +P +Y+ + NIYN+ G EA
Sbjct: 531 MDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEAN 590
Query: 536 GVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIK 595
++ ++ +R P +W E+ + H F G + + +Y+++ ++ + GY+
Sbjct: 591 LSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVP 650
Query: 596 ENEMLLPDVDEEEQRLQQ--YHSEKLAIAFGLINTPDWTP-----LQITQGHRVCGDCHN 648
E D+++EEQ +HSEKLA+AF ++ + +QI + R+C DCHN
Sbjct: 651 EMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHN 710
Query: 649 AIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
+KL + + G+EI++RD++RFHHF++++CSC DYW
Sbjct: 711 FMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 136/538 (25%), Positives = 236/538 (43%), Gaps = 77/538 (14%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGF--EPDLYMMNRVLLMHVKCGLMLDARKLFG 169
Y AL C R++ + ++M+S + ++ + N ++ M+ KCG +L AR++F
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 170 DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQV 229
MPER+VVSW +I G V +G+ E F LF M S F S+ L +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-------SHCFPNEFTLSSVLTSCRY 173
Query: 230 --GRQIHSCALKMGVGGDSFVACALIDMYSKC---GSIEDAQCAFDQMPEKTTVGWNSII 284
G+Q+H ALK+G+ +VA A+I MY +C + +A F+ + K V WNS+I
Sbjct: 174 EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMI 233
Query: 285 AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR------LASLEHAK---QAH 335
A + ++A+ +++ M G D T+ + IC L E +K Q H
Sbjct: 234 AAFQCCNLGKKAIGVFMRMHSDGVGFDRATL---LNICSSLYKSSDLVPNEVSKCCLQLH 290
Query: 336 AALVRHGFGSDIVANTALVDFYSK-WGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQ 393
+ V+ G + TAL+ YS+ D +F M H +++++WN +I + +
Sbjct: 291 SLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-D 349
Query: 394 GEQAIQMFEQMLRERVIPNHVTFLAVLSAC-----SYSGLSERGWEIFYSMSRDHKVKPR 448
E+AI +F Q+ +E++ P+ TF +VL AC + LS I D +
Sbjct: 350 PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409
Query: 449 AMH-------------------------YACMIELLGREGLLDEAFALIRRAPFEPTKNM 483
+H + M++ G +D + ++ P
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSAT 469
Query: 484 WVALLTACRMHGNLELGKFAAEKLYEMDPG--KLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
++ALL+AC G +E G ++E +L +Y ++++ + + + EA V+
Sbjct: 470 FIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVI--- 526
Query: 542 KRKGLRMLP-TCTWIEVKKQPHAFLCGDKSHTQT---KEIYQKVDEILDEISRHGYIK 595
K + M P WI A L + H T K K+ E+++ + YI+
Sbjct: 527 --KQMPMDPDAVVWI-------ALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQ 575
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/699 (25%), Positives = 328/699 (46%), Gaps = 108/699 (15%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A+ELF ++ G A ST L+ VC +++ Y++ G E ++ M N
Sbjct: 72 KAVELFREMQFSG--AKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNS 129
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF----------- 199
+++M+ + G + +RK+F M +R++ SW +++ G +A GL
Sbjct: 130 LIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD 189
Query: 200 LFMWVEFNDG------------------------RSRTFATMVRASAGLGLIQVGRQIHS 235
+ W G + + +++++A A G +++G+ IH
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHG 249
Query: 236 CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSII----------- 284
L+ + D +V LIDMY K G + A+ FD M K V WNS++
Sbjct: 250 YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKD 309
Query: 285 ------------------------AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
+GYA G E+AL + +M++ G + + + +
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369
Query: 321 ICVRLASLEHAKQAHAALVRHGFGS----------------------------------- 345
C + + +A + + G G
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
D TALVD Y K G ++ A +F + K++ SWN ++ GY G+GE+ I F ML
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
+ P+ +TF +VLS C SGL + GW+ F M + + P H +CM++LLGR G L
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIY 525
DEA+ I+ +P +W A L++C++H +LEL + A ++L ++P NY+M++N+Y
Sbjct: 550 DEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLY 609
Query: 526 NSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEIL 585
++ + ++ + ++ +R+ +WI++ + H F K+H +IY ++ +++
Sbjct: 610 SNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLV 669
Query: 586 DEISRHGYIKENEMLLPDV-DEEEQRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCG 644
E+ + GY+ + + D+ D E+++L H+EKLA+ +GLI P+++ + +C
Sbjct: 670 SEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICS 729
Query: 645 DCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
D H K ++++ REIV+++ +R HHFR+ CSC D W
Sbjct: 730 DSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 166/372 (44%), Gaps = 71/372 (19%)
Query: 164 ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAG 223
A KLF +MP+RD ++W ++ + SG++ +A LF M T +++ +
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 224 LGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKT------- 276
GRQIH L++G+ + + +LI MYS+ G +E ++ F+ M ++
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 277 ----------------------------TVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
V WNS+++GYA G S++A+++ M+ +G
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGL 221
Query: 309 KIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARH 368
K +IS +++ L+ K H ++R+ D+ T L+D Y K G + AR
Sbjct: 222 KPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARM 281
Query: 369 VFDRMHRKNVISWNALI-----------------------------------AGYGNHGQ 393
VFD M KN+++WN+L+ +GY G+
Sbjct: 282 VFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK 341
Query: 394 GEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYA 453
E+A+ + +M + V PN V++ A+ S CS +G ++F M ++ V P A +
Sbjct: 342 PEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM-QEEGVGPNAATMS 400
Query: 454 CMIELLGREGLL 465
++++LG LL
Sbjct: 401 TLLKILGCLSLL 412
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 125/238 (52%), Gaps = 2/238 (0%)
Query: 229 VGRQIHSCALKMGV-GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
+G IH +K G+ D+ V A + Y +C S+ A FD+MP++ + WN I+
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDI 347
G E+A+ ++ EM+ SGAK T+ ++++C +Q H ++R G S++
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE 407
+L+ YS+ G++E +R VF+ M +N+ SWN++++ Y G + AI + ++M
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 408 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
+ P+ VT+ ++LS + GLS+ + M + +KP + +++ + G L
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHL 241
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 176/587 (29%), Positives = 315/587 (53%), Gaps = 29/587 (4%)
Query: 114 DALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKC-----GLMLDARKLF 168
+ ++ CV S +K++ ++ +++G ++ +R+L +C G + A ++F
Sbjct: 7 ETMIQKCV---SFSQIKQLQSHFLTAGHFQSSFLRSRLL---ERCAISPFGDLSFAVQIF 60
Query: 169 GDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRS------RTFATMVRASA 222
+P+ W +I G S S AF + M + + + T + ++A A
Sbjct: 61 RYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACA 120
Query: 223 GLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNS 282
Q+H + G+ DS + L+D YSK G + A FD+MP + WN+
Sbjct: 121 RALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNA 180
Query: 283 IIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
+IAG + EA+ +Y M G + T+ + C L ++ + + HG
Sbjct: 181 LIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN-----IFHG 235
Query: 343 FGSD-IVANTALVDFYSKWGRMEDARHVFDRMH-RKNVISWNALIAGYGNHGQGEQAIQM 400
+ +D ++ + A +D YSK G ++ A VF++ +K+V++WN +I G+ HG+ +A+++
Sbjct: 236 YSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEI 295
Query: 401 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 460
F+++ + P+ V++LA L+AC ++GL E G +F +M+ V+ HY C+++LL
Sbjct: 296 FDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMAC-KGVERNMKHYGCVVDLLS 354
Query: 461 REGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVM 520
R G L EA +I P +W +LL A ++ ++E+ + A+ ++ EM ++V+
Sbjct: 355 RAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVL 414
Query: 521 LLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQK 580
L N+Y + G+ K+ V ++ K ++ +P ++IE K H F DKSH Q +EIY+K
Sbjct: 415 LSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEK 474
Query: 581 VDEILDEISRHGYIKENEMLLPDVDEEEQRLQQ-YHSEKLAIAFGLI---NTPDWTPLQI 636
+DEI +I GY+ + ++L D+ EEE+ YHSEKLA+A+GL+ + +P+++
Sbjct: 475 IDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRV 534
Query: 637 TQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
R+CGDCH K I+ + REI+VRD RFH F++ +CSC D+W
Sbjct: 535 INNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 22/258 (8%)
Query: 59 KMPVLDDAQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVN 118
+MPV D A GL S NR EAMEL++ +E EG T A +
Sbjct: 169 EMPVRDVAS-WNALIAGLVSG-------NRASEAMELYKRMETEG--IRRSEVTVVAALG 218
Query: 119 VCVGLRSIRGVKKVFNYMISSGFEPD-LYMMNRVLLMHVKCGLMLDARKLFGDMP-ERDV 176
C L ++ + +F+ G+ D + + N + M+ KCG + A ++F ++ V
Sbjct: 219 ACSHLGDVKEGENIFH-----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSV 273
Query: 177 VSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSC 236
V+W T+I G G+ A +F + ++ + A GL++ G + +
Sbjct: 274 VTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNN 333
Query: 237 ALKMGVGGDSFVACALIDMYSKCGSIEDAQ---CAFDQMPEKTTVGWNSIIAGYALHGYS 293
GV + ++D+ S+ G + +A C+ +P+ V W S++ ++
Sbjct: 334 MACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPD--PVLWQSLLGASEIYSDV 391
Query: 294 EEALSIYLEMRDSGAKID 311
E A E+++ G D
Sbjct: 392 EMAEIASREIKEMGVNND 409
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 248/434 (57%), Gaps = 5/434 (1%)
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRD-SGAKI 310
+I+ K G A+ ++ + WN +I GY + EEAL M + K
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
+ F+ + + C RL L HAK H+ ++ G + + ++ALVD Y+K G + +R VF
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 371 DRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 430
+ R +V WNA+I G+ HG +AI++F +M E V P+ +TFL +L+ CS+ GL E
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 431 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTA 490
G E F MSR ++P+ HY M++LLGR G + EA+ LI P EP +W +LL++
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 491 CRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLP 550
R + N ELG+ A + L + G +YV+L NIY+S+ K + A V + + ++G+R
Sbjct: 344 SRTYKNPELGEIAIQNLSKAKSG---DYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAK 400
Query: 551 TCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQR 610
+W+E H F GD SH +TK IY+ ++ ++ + G++ + +++L DV EEE+
Sbjct: 401 GKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKE 460
Query: 611 LQ-QYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRF 669
YHSEKLA+A+ ++ + T ++I + R+C DCHN IK ++ + R I++RD RF
Sbjct: 461 ENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRF 520
Query: 670 HHFRNATCSCGDYW 683
H F + CSC DYW
Sbjct: 521 HRFEDGLCSCRDYW 534
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 130/266 (48%), Gaps = 8/266 (3%)
Query: 141 FEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFL 200
P + +N ++ +K G A+K+ + +++V++W +IGG V + Y EA
Sbjct: 94 LSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALK 153
Query: 201 FMWVEFNDGRSR--TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSK 258
M + F D + +FA+ + A A LG + + +HS + G+ ++ ++ AL+D+Y+K
Sbjct: 154 NM-LSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAK 212
Query: 259 CGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIV 318
CG I ++ F + WN++I G+A HG + EA+ ++ EM D T +
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGL 272
Query: 319 IRICVRLASLEHAKQAHAALVRH-GFGSDIVANTALVDFYSKWGRMEDARHVFDRMH-RK 376
+ C LE K+ + R + A+VD + GR+++A + + M
Sbjct: 273 LTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEP 332
Query: 377 NVISWNALIAG---YGNHGQGEQAIQ 399
+V+ W +L++ Y N GE AIQ
Sbjct: 333 DVVIWRSLLSSSRTYKNPELGEIAIQ 358
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 250/436 (57%), Gaps = 2/436 (0%)
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
+L ++ KCG DA +F M E+D+V+W ++I GL +G + EA +F M + + +
Sbjct: 414 LLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 473
Query: 211 --SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
S ++ A AGL ++ G Q+H +K G+ + FV +LID+YSKCG E A
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
F M + V WNS+I+ Y+ + E ++ ++ M G D +I+ V+ ASL
Sbjct: 534 FTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASL 593
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
K H +R G SD AL+D Y K G + A ++F +M K++I+WN +I GY
Sbjct: 594 LKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGY 653
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 448
G+HG A+ +F++M + P+ VTFL+++SAC++SG E G IF M +D+ ++P
Sbjct: 654 GSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPN 713
Query: 449 AMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLY 508
HYA M++LLGR GLL+EA++ I+ P E ++W+ LL+A R H N+ELG +AEKL
Sbjct: 714 MEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLL 773
Query: 509 EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGD 568
M+P + YV L+N+Y +G EAA +L +K KGL P C+WIEV + + F G
Sbjct: 774 RMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGG 833
Query: 569 KSHTQTKEIYQKVDEI 584
S EI+ ++ +
Sbjct: 834 SSSPMKAEIFNVLNRL 849
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 184/373 (49%), Gaps = 10/373 (2%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER-DVVSWMTVIGGLVD 188
K++ +M+ + + D ++ ++ M+ K GL +DA ++F ++ ++ +VV W +I G
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV 248
SG + L++ S +F + A + GRQIH +KMG+ D +V
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
+L+ MYSKCG + +A+ F + +K WN+++A YA + Y AL ++ MR
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 309 KIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARH 368
D FT+S VI C L + K HA L + S +AL+ YSK G DA
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 369 VFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML--RERVIPNHVTFLAVLSACSYS 426
VF M K++++W +LI+G +G+ ++A+++F M + + P+ +V +AC+
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 427 GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNM--W 484
G ++ SM + V + +I+L + GL + A + T+NM W
Sbjct: 490 EALRFGLQVHGSMIKTGLV-LNVFVGSSLIDLYSKCGLPEMALKVFTSM---STENMVAW 545
Query: 485 VALLTACRMHGNL 497
++++ C NL
Sbjct: 546 NSMIS-CYSRNNL 557
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 188/398 (47%), Gaps = 14/398 (3%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLF--- 168
T+ +L+ C L ++ K + ++ G+ D ++ ++ M+VKCG + A ++F
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 169 ----GDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN---DGRSRTFATMVRAS 221
+ RDV W ++I G + E G F M V F D S + V
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV-FGVRPDAFSLSIVVSVMCK 180
Query: 222 AGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG-W 280
G + G+QIH L+ + DSF+ ALIDMY K G DA F ++ +K+ V W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 281 NSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR 340
N +I G+ G E +L +Y+ +++ K+ + + + C + + +Q H +V+
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 341 HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQM 400
G +D T+L+ YSK G + +A VF + K + WNA++A Y + G A+ +
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 401 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 460
F M ++ V+P+ T V+S CS GL G + + + ++ + + ++ L
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK-RPIQSTSTIESALLTLYS 419
Query: 461 REGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE 498
+ G +A+ L+ ++ E W +L++ +G +
Sbjct: 420 KCGCDPDAY-LVFKSMEEKDMVAWGSLISGLCKNGKFK 456
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 161/329 (48%), Gaps = 8/329 (2%)
Query: 84 GLCN--RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGF 141
GLC + +EA+++F ++ + D + ++ N C GL ++R +V MI +G
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLF 201
++++ + ++ ++ KCGL A K+F M ++V+W ++I + + LF
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNL 567
Query: 202 MWVE--FNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKC 259
M + F D S T + +V S+ L++ G+ +H L++G+ D+ + ALIDMY KC
Sbjct: 568 MLSQGIFPDSVSIT-SVLVAISSTASLLK-GKSLHGYTLRLGIPSDTHLKNALIDMYVKC 625
Query: 260 GSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVI 319
G + A+ F +M K+ + WN +I GY HG ALS++ EM+ +G D T +I
Sbjct: 626 GFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLI 685
Query: 320 RICVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV 378
C +E K + + +G ++ +VD + G +E+A M +
Sbjct: 686 SACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEAD 745
Query: 379 IS-WNALIAGYGNHGQGEQAIQMFEQMLR 406
S W L++ H E I E++LR
Sbjct: 746 SSIWLCLLSASRTHHNVELGILSAEKLLR 774
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 165/371 (44%), Gaps = 38/371 (10%)
Query: 183 IGGLVDSGDYSEAFGLFLFMWVEFNDGRSR------TFATMVRASAGLGLIQVGRQIHSC 236
I L+ G+Y +A L+ +DG S TF ++++A + L + G+ IH
Sbjct: 31 IRALIQKGEYLQALHLY-----SKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 237 ALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE-------KTTVGWNSIIAGYAL 289
+ +G D F+A +L++MY KCG ++ A FD + + WNS+I GY
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL--EHAKQAHAALVRHGFGSDI 347
+E + + M G + D F++SIV+ + + + E KQ H ++R+ +D
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRK-NVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
TAL+D Y K+G DA VF + K NV+ WN +I G+G G E ++ ++
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 407 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMH---YAC--MIELLGR 461
V +F L ACS S S G +I V +H Y C ++ + +
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQI------HCDVVKMGLHNDPYVCTSLLSMYSK 319
Query: 462 EGLLDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNY 518
G++ EA F+ + E M A + L+L F +K D L N
Sbjct: 320 CGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNV 379
Query: 519 V---MLLNIYN 526
+ +L +YN
Sbjct: 380 ISCCSVLGLYN 390
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 161/492 (32%), Positives = 268/492 (54%), Gaps = 2/492 (0%)
Query: 88 RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
R++E + F + + +D T+ + C GLR ++ K + ++I GF L +
Sbjct: 189 RYKEGLTYFSEMSRSEELSDT--YTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCV 246
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
N + M+ +CG M D LF +M ERDVVSW ++I G +A F+ M
Sbjct: 247 ANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQV 306
Query: 208 DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQC 267
+TFA+M A A L + G Q+H L +G+ V+ +++ MYS CG++ A
Sbjct: 307 PPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV 366
Query: 268 AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLAS 327
F M + + W++II GY G+ EE + MR SG K F ++ ++ + +A
Sbjct: 367 LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAV 426
Query: 328 LEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAG 387
+E +Q HA + G + ++L++ YSK G +++A +F R +++S A+I G
Sbjct: 427 IEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486
Query: 388 YGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 447
Y HG+ ++AI +FE+ L+ P+ VTF++VL+AC++SG + G+ F M + ++P
Sbjct: 487 YAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRP 546
Query: 448 RAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
HY CM++LL R G L +A +I ++ +W LL AC+ G++E G+ AAE++
Sbjct: 547 AKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERI 606
Query: 508 YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCG 567
E+DP V L NIY+S+G L+EAA V + +K KG+ P + I++K AF+ G
Sbjct: 607 LELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSG 666
Query: 568 DKSHTQTKEIYQ 579
D+ H Q+++IY
Sbjct: 667 DRFHPQSEDIYN 678
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 228/519 (43%), Gaps = 37/519 (7%)
Query: 78 SQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMI 137
S I++ N EA+ LF + + S ++ C +I + + Y +
Sbjct: 76 SIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAV 135
Query: 138 SSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFG 197
+ +Y+ + +L M+ + G + + ++F +MP R+ V+W +I GLV +G Y E
Sbjct: 136 KTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLT 195
Query: 198 LFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYS 257
F M + TFA ++A AGL ++ G+ IH+ + G VA +L MY+
Sbjct: 196 YFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYT 255
Query: 258 KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISI 317
+CG ++D C F+ M E+ V W S+I Y G +A+ +++MR+S + T +
Sbjct: 256 ECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFAS 315
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKN 377
+ C L+ L +Q H ++ G + + +++ YS G + A +F M ++
Sbjct: 316 MFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRD 375
Query: 378 VISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF- 436
+ISW+ +I GY G GE+ + F M + P ++LS + E G ++
Sbjct: 376 IISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHA 435
Query: 437 ----YSMSRDHKVKPR--AMHYAC-----------------------MIELLGREGLLDE 467
+ + ++ V+ M+ C MI G E
Sbjct: 436 LALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKE 495
Query: 468 AFALIRRA---PFEPTKNMWVALLTACRMHGNLELGKF---AAEKLYEMDPGKLCNYVML 521
A L ++ F P ++++LTAC G L+LG ++ Y M P K +Y +
Sbjct: 496 AIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKE-HYGCM 554
Query: 522 LNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQ 560
+++ +G+L +A ++ + K ++ T I K +
Sbjct: 555 VDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 150/295 (50%), Gaps = 9/295 (3%)
Query: 141 FEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFL 200
F+P+ ++ R L + G + AR++F MP D+VSW ++I V + + EA LF
Sbjct: 41 FDPNSHL--RSL---INAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFS 95
Query: 201 FMWV--EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSK 258
M V + + +++A I G +H+ A+K + +V +L+DMY +
Sbjct: 96 AMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR 155
Query: 259 CGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIV 318
G I+ + F +MP + V W +II G G +E L+ + EM S D +T +I
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 319 IRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV 378
++ C L +++ K H ++ GF + + +L Y++ G M+D +F+ M ++V
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 379 ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 433
+SW +LI Y GQ +A++ F +M +V PN TF ++ SAC + LS W
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC--ASLSRLVW 328
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 287/520 (55%), Gaps = 12/520 (2%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA +LF+ + L G +D GA L C + + K+V + G + DL+ +
Sbjct: 512 EAFDLFKRMNLCGIVSD-GACLASTL-KACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ M+ KCG++ DARK+F +PE VVS +I G + EA LF M +
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPS 628
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDS-FVACALIDMYSKCGSIEDAQCAF 269
TFAT+V A + +G Q H K G + ++ +L+ MY + +A F
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 270 DQMPE-KTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
++ K+ V W +++G++ +G+ EEAL Y EMR G D T V+R+C L+SL
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL 748
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-NVISWNALIAG 387
+ H+ + D + + L+D Y+K G M+ + VFD M R+ NV+SWN+LI G
Sbjct: 749 REGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Query: 388 YGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 447
Y +G E A+++F+ M + ++P+ +TFL VL+ACS++G G +IF M + ++
Sbjct: 809 YAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEA 868
Query: 448 RAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
R H ACM++LLGR G L EA I +P +W +LL ACR+HG+ G+ +AEKL
Sbjct: 869 RVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKL 928
Query: 508 YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCG 567
E++P YV+L NIY S G ++A + + ++ +G++ +P +WI+V+++ H F G
Sbjct: 929 IELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAG 988
Query: 568 DKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEE 607
DKSH++ +I ++++ D +K++ ++ PD+ E+
Sbjct: 989 DKSHSEIGKIEMFLEDLYD------LMKDDAVVNPDIVEQ 1022
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 154/294 (52%)
Query: 132 VFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGD 191
VF M G PD V+ +++ G + DAR LFG+M DVV+W +I G G
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC 307
Query: 192 YSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACA 251
+ A F M T +++ A + + +G +H+ A+K+G+ + +V +
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKID 311
L+ MYSKC +E A F+ + EK V WN++I GYA +G S + + ++++M+ SG ID
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427
Query: 312 HFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
FT + ++ C LE Q H+ +++ ++ ALVD Y+K G +EDAR +F+
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSY 425
RM ++ ++WN +I Y +A +F++M ++ + + L AC++
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 220/460 (47%), Gaps = 43/460 (9%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+ MELF ++++ ++ T+ +L++ C + + + +I +L++ N
Sbjct: 411 KVMELF--MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ M+ KCG + DAR++F M +RD V+W T+IG V + SEAF LF M +
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
A+ ++A + + G+Q+H ++K G+ D +LIDMYSKCG I+DA+ F
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEH 330
+PE + V N++IAGY+ + EEA+ ++ EM G T + ++ C + SL
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 331 AKQAHAALVRHGFGSD-IVANTALVDFYSKWGRMEDARHVFDRMHR-KNVISWNALIAGY 388
Q H + + GF S+ +L+ Y M +A +F + K+++ W +++G+
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI------------- 435
+G E+A++ +++M + V+P+ TF+ VL CS G I
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767
Query: 436 --------FYSMSRDHK----------VKPRAMHYACMIELLGREGLLDEA---FALIRR 474
Y+ D K + + + +I + G ++A F +R+
Sbjct: 768 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
Query: 475 APFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGK 514
+ P + ++ +LTAC G + G+ K++EM G+
Sbjct: 828 SHIMPDEITFLGVLTACSHAGKVSDGR----KIFEMMIGQ 863
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 211/446 (47%), Gaps = 41/446 (9%)
Query: 137 ISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAF 196
I G ++Y+ + ++ M+ KC M A K+F + E++ V W +I G +G+ +
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVM 413
Query: 197 GLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMY 256
LF+ M + TF +++ A +++G Q HS +K + + FV AL+DMY
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 257 SKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTIS 316
+KCG++EDA+ F++M ++ V WN+II Y EA ++ M G D ++
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLA 533
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
++ C + L KQ H V+ G D+ ++L+D YSK G ++DAR VF +
Sbjct: 534 STLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSAC------------- 423
+V+S NALIAGY + E+A+ +F++ML V P+ +TF ++ AC
Sbjct: 594 SVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 424 ---SYSGLSERGWEIFYSMSRDHKVKPRAMHYAC-----------------MIELLGREG 463
+ G S G + S+ + + R M AC M+ + G
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMY-MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Query: 464 LLDEAFAL---IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM--DPGKLCNY 518
+EA +R P + +V +L C + +L G+ ++ + D +L +
Sbjct: 712 FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN 771
Query: 519 VMLLNIYNSSGKLKEAAGVLQTLKRK 544
L+++Y G +K ++ V ++R+
Sbjct: 772 T-LIDMYAKCGDMKGSSQVFDEMRRR 796
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 171/324 (52%), Gaps = 14/324 (4%)
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAG 286
+++G+ +HS +L +G+ + + A++D+Y+KC + A+ FD + EK WNS+++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
Y+ G + L ++ + ++ + FT SIV+ C R ++E +Q H ++++ G +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
ALVD Y+K R+ DAR VF+ + N + W L +GY G E+A+ +FE+M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 407 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG--- 463
E P+H+ F+ V++ G + +F MS P + + MI G+ G
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCET 309
Query: 464 LLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCN-YV--M 520
+ E F +R++ + T++ ++L+A + NL+LG + ++ G N YV
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL--GLASNIYVGSS 367
Query: 521 LLNIYNSSGKLKEAAGVLQTLKRK 544
L+++Y+ K++ AA V + L+ K
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEK 391
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 161/363 (44%), Gaps = 36/363 (9%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ +++ C ++ +++ MI G E + Y ++ M+ KC + DAR++F +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
+ + V W + G V +G EA +F M E
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE-------------------------- 255
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
G D +I+ Y + G ++DA+ F +M V WN +I+G+ G
Sbjct: 256 ---------GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
A+ + MR S K T+ V+ +A+L+ HA ++ G S+I +
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
+LV YSK +ME A VF+ + KN + WNA+I GY ++G+ + +++F M
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 412 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 471
+ TF ++LS C+ S E G + F+S+ K+ ++++ + G L++A +
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 472 IRR 474
R
Sbjct: 486 FER 488
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 54/325 (16%)
Query: 116 LVNVCVGLRSIRGVKKVFNYM------------------ISSGFEPDLYMMNRVLLMHVK 157
L+ +C+G + +KVF+ M + G + + + N ++ ++ K
Sbjct: 48 LLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAK 107
Query: 158 CGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATM 217
C + A K F D E+DV +W +++ G + F+ ++ TF+ +
Sbjct: 108 CAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIV 166
Query: 218 VRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTT 277
+ A ++ GRQIH +KMG+ +S+ AL+DMY+KC I DA+ F+ + + T
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 278 VGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAA 337
V W + +GY G EEA+ ++ MRD G + DH VI +RL
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRL------------ 274
Query: 338 LVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQA 397
G+++DAR +F M +V++WN +I+G+G G A
Sbjct: 275 -----------------------GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 398 IQMFEQMLRERVIPNHVTFLAVLSA 422
I+ F M + V T +VLSA
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSA 336
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 303/594 (51%), Gaps = 15/594 (2%)
Query: 88 RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
R +EA+ F LE+ TY A++++C +RS+ K++ + I GFE +
Sbjct: 305 RAKEAVGTF--LEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 148 MNRVLLMHVKCGLM-LDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
N ++ M++KC ++A ++FG M +VVSW T+I GLVD G + FGL + M
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
+ T + ++RA + L ++ +IH+ L+ V G+ V +L+D Y+ ++ A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 267 CAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA 326
M + + + S++ + G E ALS+ M G ++D ++ I L
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 327 SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIA 386
+LE K H V+ GF +LVD YSK G +EDA+ VF+ + +V+SWN L++
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Query: 387 GYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 446
G ++G A+ FE+M + P+ VTFL +LSACS L++ G E F M + + ++
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIE 662
Query: 447 PRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEK 506
P+ HY ++ +LGR G L+EA ++ +P ++ LL ACR GNL LG+ A K
Sbjct: 663 PQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANK 722
Query: 507 LYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLC 566
+ P Y++L ++Y+ SGK + A + K L + +EV+ + H+F+
Sbjct: 723 GLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVS 782
Query: 567 GDKSHT-QTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQQYHSEKLAIAFGL 625
D + +T IY +++ I +EI R G P E +HS K A+ +G
Sbjct: 783 EDVTRVDKTNGIYAEIESIKEEIKRFGS--------PYRGNEN---ASFHSAKQAVVYGF 831
Query: 626 INTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSC 679
I P+ + + +C DCH + ++ + ++I VRD ++ H F+N CSC
Sbjct: 832 IYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 175/353 (49%), Gaps = 4/353 (1%)
Query: 92 AMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRV 151
A+ LFE E+ T+ ++V C GLR I +V +I +GFE + + + +
Sbjct: 108 ALSLFE--EMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSL 165
Query: 152 LLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRS 211
++ KCG +A +LF + D +SW +I LV + + EA + M
Sbjct: 166 SDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNE 225
Query: 212 RTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQ 271
TF ++ AS+ LGL + G+ IHS + G+ + + +L+D YS+ +EDA +
Sbjct: 226 FTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Query: 272 MPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA 331
E+ W S+++G+ + ++EA+ +LEMR G + ++FT S ++ +C + SL+
Sbjct: 285 SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFG 344
Query: 332 KQAHAALVRHGFGSDIVANTALVDFYSKWGRME-DARHVFDRMHRKNVISWNALIAGYGN 390
KQ H+ ++ GF ALVD Y K E +A VF M NV+SW LI G +
Sbjct: 345 KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVD 404
Query: 391 HGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
HG + + +M++ V PN VT VL ACS R EI + R H
Sbjct: 405 HGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 208/449 (46%), Gaps = 46/449 (10%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
+I G +L + N +L +++K + +ARKLF +M R V +W +I S +++ A
Sbjct: 49 VIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASA 108
Query: 196 FGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDM 255
LF M TF+++VR+ AGL I G ++H +K G G+S V +L D+
Sbjct: 109 LSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDL 168
Query: 256 YSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTI 315
YSKCG ++A F + T+ W +I+ EAL Y EM +G + FT
Sbjct: 169 YSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF 228
Query: 316 SIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHR 375
++ L LE K H+ ++ G ++V T+LVDFYS++ +MEDA V +
Sbjct: 229 VKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGE 287
Query: 376 KNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS----------- 424
++V W ++++G+ + + ++A+ F +M + PN+ T+ A+LS CS
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI 347
Query: 425 YSGLSERGWE-------------------------IFYSMSRDHKVKPRAMHYACMIELL 459
+S + G+E +F +M V P + + +I L
Sbjct: 348 HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM-----VSPNVVSWTTLILGL 402
Query: 460 GREGLLDEAFALIR---RAPFEPTKNMWVALLTAC-RMHGNLELGKFAAEKLYEMDPGKL 515
G + + F L+ + EP +L AC ++ + + A L G++
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM 462
Query: 516 CNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
L++ Y SS K+ A V++++KR+
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKRR 491
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%)
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
++G IH +K G+ + + L+ +Y K I +A+ FD+M +T W +I+ +
Sbjct: 40 RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAF 99
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDI 347
ALS++ EM SG + FT S V+R C L + + + H ++++ GF +
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE 407
V ++L D YSK G+ ++A +F + + ISW +I+ + +A+Q + +M++
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 408 RVIPNHVTFLAVLSACSYSGL 428
V PN TF+ +L A S+ GL
Sbjct: 220 GVPPNEFTFVKLLGASSFLGL 240
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/474 (34%), Positives = 251/474 (52%), Gaps = 44/474 (9%)
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEA---FGLFL 200
+LY N ++ +VK G+++ AR +F MPERDVVSW T++ G G+ EA + F
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG 260
++FN+ +FA ++ A +Q+ RQ H L G + ++C++ID Y+KCG
Sbjct: 172 RSGIKFNEF---SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 261 SIEDAQCAFDQM-------------------------------PEKTTVGWNSIIAGYAL 289
+E A+ FD+M PEK V W ++IAGY
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
G AL ++ +M G K + FT S + +ASL H K+ H ++R + +
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 350 NTALVDFYSKWGRMEDARHVF---DRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
++L+D YSK G +E + VF D H + + WN +I+ HG G +A++M + M++
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKH--DCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 407 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 466
RV PN T + +L+ACS+SGL E G F SM+ H + P HYAC+I+LLGR G
Sbjct: 407 FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFK 466
Query: 467 EAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYN 526
E I PFEP K++W A+L CR+HGN ELGK AA++L ++DP Y++L +IY
Sbjct: 467 ELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYA 526
Query: 527 SSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTK--EIY 578
GK + + +K++ + +WIE++K+ AF D SH + EIY
Sbjct: 527 DHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIY 580
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 146/329 (44%), Gaps = 34/329 (10%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
++ L+ CV R ++ ++ ++ +GF ++ + ++ + KCG M A++ F +M
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFM-------WVEFNDGRSR------------ 212
+D+ W T+I G GD A LF M W G R
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 213 ------------TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG 260
TF++ + ASA + ++ G++IH ++ V ++ V +LIDMYSK G
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSG 360
Query: 261 SIEDAQCAFDQMPEK-TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVI 319
S+E ++ F +K V WN++I+ A HG +AL + +M + + T+ +++
Sbjct: 361 SLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Query: 320 RICVRLASLEHAKQAHAAL-VRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM-HRKN 377
C +E + ++ V+HG D L+D + G ++ + M +
Sbjct: 421 NACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPD 480
Query: 378 VISWNALIAGYGNHGQGEQAIQMFEQMLR 406
WNA++ HG E + +++++
Sbjct: 481 KHIWNAILGVCRIHGNEELGKKAADELIK 509
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 281 NSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR 340
S ++ +A +A+S + G ++ ++ +++ C SL+ K H L
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 341 HGFG-SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQ 399
GF + + + L+ Y K G+ DA VFD+MH +N+ SWN +++GY G +A
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMI 456
+F+ M V+ + V+ L E W FY R +K +A ++
Sbjct: 135 VFDSMPERDVVSWNTM---VIGYAQDGNLHEALW--FYKEFRRSGIKFNEFSFAGLL 186
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 285/520 (54%), Gaps = 3/520 (0%)
Query: 67 QIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSI 126
++ KP S + +A+E F + + D T LV+ C L +
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP-DRVTLITLVSACTKLSNS 179
Query: 127 RGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGL 186
R + V ++I GF DL ++N +L + K +A LF + E+DV+SW TVI
Sbjct: 180 RLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACY 239
Query: 187 VDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDS 246
V +G +EA +F M + + T +++A A ++ GR+ H A++ G+ +
Sbjct: 240 VQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEV 299
Query: 247 FVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIY-LEMRD 305
V+ AL+DMY KC S E+A F ++P K V W ++I+G+ L+G + ++ + + + +
Sbjct: 300 KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
Query: 306 SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMED 365
+ + D + V+ C L LE AK H+ ++++GF S+ +LV+ YS+ G + +
Sbjct: 360 NNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 366 ARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE-RVIPNHVTFLAVLSACS 424
A VF+ + K+ + W +LI GYG HG+G +A++ F M++ V PN VTFL++LSACS
Sbjct: 420 ASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Query: 425 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMW 484
++GL G IF M D+++ P HYA +++LLGR G LD A + +R PF PT +
Sbjct: 480 HAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL 539
Query: 485 VALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
LL ACR+H N E+ + A+KL+E++ Y+++ N+Y G+ + + ++K++
Sbjct: 540 GTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQR 599
Query: 545 GLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEI 584
G++ + IE++++ H F+ D+ H + + +Y + E+
Sbjct: 600 GIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKEL 639
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 188/354 (53%), Gaps = 4/354 (1%)
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
DLY+ + ++ M++KCG M++A ++F ++ + D+V+W +++ G +G +A F M
Sbjct: 95 DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154
Query: 204 VEFNDGRSR-TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSI 262
+ + R T T+V A L ++GR +H ++ G D + +L++ Y+K +
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 214
Query: 263 EDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC 322
++A F + EK + W+++IA Y +G + EAL ++ +M D G + + T+ V++ C
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQAC 274
Query: 323 VRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWN 382
LE ++ H +R G +++ +TALVD Y K E+A VF R+ RK+V+SW
Sbjct: 275 AAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWV 334
Query: 383 ALIAGYGNHGQGEQAIQMFEQMLRE-RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 441
ALI+G+ +G ++I+ F ML E P+ + + VL +CS G E+ + F+S
Sbjct: 335 ALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVI 393
Query: 442 DHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHG 495
+ A ++EL R G L A + + T +W +L+T +HG
Sbjct: 394 KYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTV-VWTSLITGYGIHG 446
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 172/336 (51%), Gaps = 4/336 (1%)
Query: 162 LDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRAS 221
+DAR++FG+M +R + W T++ L + E F M+ + + T ++A
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 222 AGLGLIQVGRQIHSCALK-MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGW 280
L + G IH K + +G D +V +LI MY KCG + +A FD++ + V W
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 281 NSIIAGYALHGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALV 339
+S+++G+ +G +A+ + M S D T+ ++ C +L++ + H ++
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 340 RHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQ 399
R GF +D+ +L++ Y+K ++A ++F + K+VISW+ +IA Y +G +A+
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 459
+F M+ + PN T L VL AC+ + E+G + + ++ ++ ++++
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVSTALVDMY 309
Query: 460 GREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHG 495
+ +EA+A+ R P + + WVAL++ ++G
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVS-WVALISGFTLNG 344
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Query: 258 KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISI 317
K S DA+ F +M +++ WN+++ + EE L + M K D+FT+ +
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 318 VIRICVRLASLEHAKQAHAALVRH-GFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
++ C L + + + H + + GSD+ ++L+ Y K GRM +A +FD + +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQM-LRERVIPNHVTFLAVLSACS 424
++++W+++++G+ +G QA++ F +M + V P+ VT + ++SAC+
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 269/488 (55%), Gaps = 1/488 (0%)
Query: 110 ASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFG 169
A T+ +L+ ++ K++ Y++ D+++ + ++ + KC + A+ +F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 170 DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQV 229
DVV + +I G + +G Y ++ +F ++ T +++ L +++
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
GR++H +K G + CA+IDMY+KCG + A F+++ ++ V WNS+I A
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
A+ I+ +M SG D +IS + C L S K H +++H SD+ +
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
+ L+D Y+K G ++ A +VF M KN++SWN++IA GNHG+ + ++ +F +M+ +
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 410 I-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
I P+ +TFL ++S+C + G + G F SM+ D+ ++P+ HYAC+++L GR G L EA
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Query: 469 FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSS 528
+ ++ PF P +W LL ACR+H N+EL + A+ KL ++DP YV++ N + ++
Sbjct: 700 YETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANA 759
Query: 529 GKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEI 588
+ + V +K + ++ +P +WIE+ K+ H F+ GD +H ++ IY ++ +L E+
Sbjct: 760 REWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGEL 819
Query: 589 SRHGYIKE 596
GYI +
Sbjct: 820 RLEGYIPQ 827
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 164/311 (52%)
Query: 110 ASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFG 169
ST+ LV CV L++ +G+ + + + S G + + ++ + ++ +++ G + KLF
Sbjct: 138 VSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFD 197
Query: 170 DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQV 229
+ ++D V W ++ G G F M ++ + TF ++ A LI +
Sbjct: 198 RVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL 257
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
G Q+H + GV + + +L+ MYSKCG +DA F M TV WN +I+GY
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
G EE+L+ + EM SG D T S ++ + +LE+ KQ H ++RH DI
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
+AL+D Y K + A+++F + + +V+ + A+I+GY ++G +++MF +++ ++
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 410 IPNHVTFLAVL 420
PN +T +++L
Sbjct: 438 SPNEITLVSIL 448
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 187/390 (47%), Gaps = 2/390 (0%)
Query: 109 GASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLF 168
A T+D +++VC I ++ ++ SG + + + N +L M+ KCG DA KLF
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLF 297
Query: 169 GDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQ 228
M D V+W +I G V SG E+ F M + TF++++ + + ++
Sbjct: 298 RMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLE 357
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
+QIH ++ + D F+ ALID Y KC + AQ F Q V + ++I+GY
Sbjct: 358 YCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL 417
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
+G ++L ++ + + T+ ++ + L +L+ ++ H +++ GF +
Sbjct: 418 HNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCN 477
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
A++D Y+K GRM A +F+R+ +++++SWN++I AI +F QM
Sbjct: 478 IGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG 537
Query: 409 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
+ + V+ A LSAC+ + SE + + H + + +I++ + G L A
Sbjct: 538 ICYDCVSISAALSACA-NLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA 596
Query: 469 FALIRRAPFEPTKNMWVALLTACRMHGNLE 498
+ + E W +++ AC HG L+
Sbjct: 597 MNVFKTMK-EKNIVSWNSIIAACGNHGKLK 625
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 2/311 (0%)
Query: 116 LVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFG--DMPE 173
L+ C +R K+V ++I + D Y R+L M+ CG D K+F D+
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 174 RDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQI 233
+ W ++I V +G ++A + M TF +V+A L + +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 234 HSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYS 293
+G+ + FVA +LI Y + G I+ FD++ +K V WN ++ GYA G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 294 EEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTAL 353
+ + + MR + T V+ +C ++ Q H +V G + +L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 354 VDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNH 413
+ YSK GR +DA +F M R + ++WN +I+GY G E+++ F +M+ V+P+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 414 VTFLAVLSACS 424
+TF ++L + S
Sbjct: 341 ITFSSLLPSVS 351
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 115/226 (50%), Gaps = 2/226 (0%)
Query: 212 RTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQ 271
R + +++A + L++ G+Q+H+ + + GDS+ ++ MY+ CGS D F +
Sbjct: 36 RRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYR 95
Query: 272 MP--EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
+ + WNSII+ + +G +AL+ Y +M G D T +++ CV L + +
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK 155
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
+ G + ++L+ Y ++G+++ +FDR+ +K+ + WN ++ GY
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
G + I+ F M +++ PN VTF VLS C+ L + G ++
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 267/509 (52%), Gaps = 36/509 (7%)
Query: 110 ASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFG 169
A TY +++ C + + V + S ++ LY+ N ++ M+ + M AR+LF
Sbjct: 144 AFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFD 203
Query: 170 DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW--------VEFND------------- 208
M ERD VSW VI G +SEAF LF MW + +N
Sbjct: 204 RMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVG 263
Query: 209 -----GRSRTFATMV---------RASAGLGLIQVGRQIHSCALKMGVGGDSFVACALID 254
R R F T + +A + +G I++G++IH A+ G V LI
Sbjct: 264 ALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLIT 323
Query: 255 MYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFT 314
MYSKC + A F Q E + WNSII+GYA SEEA + EM +G + + T
Sbjct: 324 MYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 315 ISIVIRICVRLASLEHAKQAHAALVRHG-FGSDIVANTALVDFYSKWGRMEDARHVFDRM 373
++ ++ +C R+A+L+H K+ H ++R F + +LVD Y+K G++ A+ V D M
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Query: 374 HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 433
+++ +++ +LI GYGN G+G A+ +F++M R + P+HVT +AVLSACS+S L G
Sbjct: 444 SKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGE 503
Query: 434 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRM 493
+F M ++ ++P H++CM++L GR G L +A +I P++P+ W LL AC +
Sbjct: 504 RLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHI 563
Query: 494 HGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCT 553
HGN ++GK+AAEKL EM P YV++ N+Y ++G + A V ++ G++ P C
Sbjct: 564 HGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCA 623
Query: 554 WIEVKKQPHAFLCGDKSHTQTKEIYQKVD 582
WI+ F GD S + Y +D
Sbjct: 624 WIDTDSGFSLFSVGDTSSPEACNTYPLLD 652
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/530 (20%), Positives = 218/530 (41%), Gaps = 78/530 (14%)
Query: 91 EAMELFEILELEGDCA---DVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
+A + F +L L+ A D+ + +L++ CV +R+ +V + ISSG E +
Sbjct: 21 DAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVL 80
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
+ +++ + L +A+ + + + W +I + + E + M +
Sbjct: 81 VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGI 140
Query: 208 DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQC 267
+ T+ ++++A + GR +H +V ALI MY + ++ A+
Sbjct: 141 RPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARR 200
Query: 268 AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIV--------- 318
FD+M E+ V WN++I YA G EA ++ +M SG ++ T +I+
Sbjct: 201 LFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260
Query: 319 --------------------------IRICVRLASLEHAKQAHAALVRHGF-GSDIVANT 351
++ C + ++ K+ H + + G D V NT
Sbjct: 261 YVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNT 320
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
L+ YSK + A VF + ++ +WN++I+GY + E+A + +ML P
Sbjct: 321 -LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQP 379
Query: 412 NHVTFLAVLSACSYSGLSERGWEIF-----------YSM---------SRDHKV------ 445
N +T ++L C+ + G E Y+M ++ K+
Sbjct: 380 NSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQV 439
Query: 446 -----KPRAMHYACMIELLGREGLLDEAFALIR---RAPFEPTKNMWVALLTACRMHGNL 497
K + Y +I+ G +G A AL + R+ +P VA+L+AC +
Sbjct: 440 SDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLV 499
Query: 498 ELGKFAAEKL---YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
G+ K+ Y + P L ++ ++++Y +G L +A ++ + K
Sbjct: 500 HEGERLFMKMQCEYGIRPC-LQHFSCMVDLYGRAGFLAKAKDIIHNMPYK 548
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 168/401 (41%), Gaps = 22/401 (5%)
Query: 183 IGGLVDSGDYSEAFGLFLFMWVEFNDGRS-----RTFATMVRASAGLGLIQVGRQIHSCA 237
+G L G +AF F + ++ + S + A+++ A + G Q+H+
Sbjct: 10 LGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 238 LKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEAL 297
+ GV S + L+ YS +AQ + + WN +IA YA + EE +
Sbjct: 70 ISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVI 129
Query: 298 SIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFY 357
+ Y M G + D FT V++ C + + H ++ + S + AL+ Y
Sbjct: 130 AAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMY 189
Query: 358 SKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
++ M AR +FDRM ++ +SWNA+I Y + G +A ++F++M V + +T+
Sbjct: 190 KRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWN 249
Query: 418 AVLSACSYSGLSERGWEIFYSMSR-DHKVKPRAMHY---ACMIELLGREGLLDEAFALIR 473
+ C +G + M + P AM AC L+G L E L
Sbjct: 250 IISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC--SLIGAIRLGKEIHGLAI 307
Query: 474 RAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKE 533
+ ++ N+ L+T M+ + + A + + LC + +++ Y K +E
Sbjct: 308 HSSYDGIDNVRNTLIT---MYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEE 364
Query: 534 AAGVLQTLKRKGLR--------MLPTCTWIEVKKQPHAFLC 566
A+ +L+ + G + +LP C I + F C
Sbjct: 365 ASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHC 405
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 171/598 (28%), Positives = 314/598 (52%), Gaps = 21/598 (3%)
Query: 100 ELEGDCADVGASTYDALVNVCVGLRS----IRGVKKVFNYMISSGFEPDLYMMNRVLLMH 155
EL G +G ++ N +G S ++ V+ ++ M++ D ++ +
Sbjct: 306 ELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ----DAVTFTEMITAY 361
Query: 156 VKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFA 215
+ G++ A ++F ++ E++ +++ ++ G +G +A LF M G T
Sbjct: 362 MSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDM---LQRGVELTDF 418
Query: 216 TMVRASAGLGLI---QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
++ A GL+ +V QIH +K G + + AL+DM ++C + DA+ FDQ
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQW 478
Query: 273 PEK--TTVGWNSIIAGYALHGYSEEALSIY-LEMRDSGAKIDHFTISIVIRICVRLASLE 329
P ++ SII GYA +G ++A+S++ + + +D ++++++ +C L E
Sbjct: 479 PSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFRE 538
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
Q H ++ G+ SDI +L+ Y+K +DA +F+ M +VISWN+LI+ Y
Sbjct: 539 MGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYI 598
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW--EIFYSMSRDHKVKP 447
G++A+ ++ +M + + P+ +T V+SA Y+ ++ ++F SM + ++P
Sbjct: 599 LQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEP 658
Query: 448 RAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
HY + +LG GLL+EA I P +P ++ ALL +CR+H N + K A+ +
Sbjct: 659 TTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLI 718
Query: 508 YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCG 567
P Y++ NIY++SG + + + ++ +G R P +WI + + H+F
Sbjct: 719 LSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHAR 778
Query: 568 DKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDE-EEQRLQQYHSEKLAIAFGLI 626
D SH Q K+IY+ ++ ++ E + GY E +L +VDE ++ +HS KLA+ +G++
Sbjct: 779 DTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGIL 838
Query: 627 NT-PDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
++ P+++ + +CGDCH K I++V REIV+RD+S FHHF N CSC D W
Sbjct: 839 SSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 142/313 (45%), Gaps = 41/313 (13%)
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFM----WV 204
N ++ ++K G +A +F + VVS+ +I G EA +F M V
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 205 EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSK--CGSI 262
+ N+ TF ++ A + +G QIH +K G FV+ +L+ +Y K S
Sbjct: 178 QPNE---YTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC 234
Query: 263 EDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM-RDSGAKIDHFTISIVIRI 321
+D FD++P++ WN++++ G S +A ++ EM R G +D FT+S ++
Sbjct: 235 DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 322 CVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSK---------------------- 359
C + L ++ H +R G ++ N AL+ FYSK
Sbjct: 295 CTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTF 354
Query: 360 ---------WGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI 410
+G ++ A +F + KN I++NAL+AG+ +G G +A+++F ML+ V
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 411 PNHVTFLAVLSAC 423
+ + + AC
Sbjct: 415 LTDFSLTSAVDAC 427
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 288 bits (738), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/502 (30%), Positives = 282/502 (56%), Gaps = 3/502 (0%)
Query: 89 HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMM 148
++EA+E F + G +D + T +++ L ++ ++ Y+I G++ +L +
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMT--SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
N ++ M+ KC L + F M ++D++SW TVI G + + EA LF + + +
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
+++RAS+ L + + ++IH L+ G+ D+ + L+D+Y KC ++ A
Sbjct: 485 IDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRV 543
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
F+ + K V W S+I+ AL+G EA+ ++ M ++G D + ++ L++L
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSAL 603
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
++ H L+R GF + A+VD Y+ G ++ A+ VFDR+ RK ++ + ++I Y
Sbjct: 604 NKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAY 663
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 448
G HG G+ A+++F++M E V P+H++FLA+L ACS++GL + G M +++++P
Sbjct: 664 GMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPW 723
Query: 449 AMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLY 508
HY C++++LGR + EAF ++ EPT +W ALL ACR H E+G+ AA++L
Sbjct: 724 PEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLL 783
Query: 509 EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGD 568
E++P N V++ N++ G+ + V +K G+ P C+WIE+ + H F D
Sbjct: 784 ELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARD 843
Query: 569 KSHTQTKEIYQKVDEILDEISR 590
KSH ++KEIY+K+ E+ ++ R
Sbjct: 844 KSHPESKEIYEKLSEVTRKLER 865
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 171/335 (51%), Gaps = 4/335 (1%)
Query: 92 AMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRV 151
A+ L+ + +EG +G S++ AL+ C LR IR ++ + ++ G+ +++N +
Sbjct: 166 ALALYWNMRVEG--VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNAL 223
Query: 152 LLMHVKCGLMLDARKLFGDMPER-DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
+ M+ K + AR+LF E+ D V W +++ SG E LF M +
Sbjct: 224 VSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPN 283
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVAC-ALIDMYSKCGSIEDAQCAF 269
S T + + A G ++G++IH+ LK C ALI MY++CG + A+
Sbjct: 284 SYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL 343
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
QM V WNS+I GY + +EAL + +M +G K D +++ +I RL++L
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
+ HA +++HG+ S++ L+D YSK F RMH K++ISW +IAGY
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS 424
+ +A+++F + ++R+ + + ++L A S
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 199/394 (50%), Gaps = 25/394 (6%)
Query: 33 FPRIRCSSSMEQGLRPKPKKTEYVDRKMPVLDDAQIMKPSTPGLCSQIEKLGLCNRHREA 92
FPR+R S+ TE R+ P Q ++ +P L L
Sbjct: 23 FPRVRLHCSI---------PTEPSCRRNPFRQSNQPVQVPSPKLACFDGVL--------- 64
Query: 93 MELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISS--GFEPDLYMMNR 150
E F+ L++ + + V A Y ++ +C R++ +++ + + + FE D ++ +
Sbjct: 65 TEAFQRLDVSENNSPVEAFAY--VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGK 121
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ M+ KCG + DA K+F +MP+R +W T+IG V +G+ + A L+ M VE
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
+F +++A A L I+ G ++HS +K+G F+ AL+ MY+K + A+ FD
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 271 QMPEK-TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
EK V WNSI++ Y+ G S E L ++ EM +G + +TI + C + +
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 330 HAKQAHAALVRHG-FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
K+ HA++++ S++ AL+ Y++ G+M A + +M+ +V++WN+LI GY
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
+ ++A++ F M+ + V+ ++++A
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 134/273 (49%), Gaps = 2/273 (0%)
Query: 204 VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD-SFVACALIDMYSKCGSI 262
V N+ FA ++ + GRQ+HS K + F+A L+ MY KCGS+
Sbjct: 73 VSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSL 132
Query: 263 EDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC 322
+DA+ FD+MP++T WN++I Y +G AL++Y MR G + + +++ C
Sbjct: 133 DDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKAC 192
Query: 323 VRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-NVISW 381
+L + + H+ LV+ G+ S ALV Y+K + AR +FD K + + W
Sbjct: 193 AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLW 252
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 441
N++++ Y G+ + +++F +M PN T ++ L+AC ++ G EI S+ +
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 312
Query: 442 DHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
+I + R G + +A ++R+
Sbjct: 313 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 233/403 (57%), Gaps = 3/403 (0%)
Query: 182 VIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMG 241
+ GL +G EA GL +W T+A +++ G++IH+ +G
Sbjct: 82 TLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVG 138
Query: 242 VGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYL 301
+ ++ L+ +Y+ G ++ A F + + + WN++I+GY G +E L IY
Sbjct: 139 FALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYY 198
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
+MR + D +T + V R C L LEH K+AHA +++ S+I+ ++ALVD Y K
Sbjct: 199 DMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCS 258
Query: 362 RMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS 421
D VFD++ +NVI+W +LI+GYG HG+ + ++ FE+M E PN VTFL VL+
Sbjct: 259 SFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLT 318
Query: 422 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTK 481
AC++ GL ++GWE FYSM RD+ ++P HYA M++ LGR G L EA+ + ++P +
Sbjct: 319 ACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHP 378
Query: 482 NMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
+W +LL ACR+HGN++L + AA K E+DP NYV+ N Y S G + A+ V + +
Sbjct: 379 PVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKM 438
Query: 542 KRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEI 584
+ G++ P + IE++ + H F+ D SH +++IY+KV E+
Sbjct: 439 ENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEM 481
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 146/318 (45%), Gaps = 17/318 (5%)
Query: 84 GLC--NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGF 141
GLC R +EA+ L L V TY L+ C + K++ M GF
Sbjct: 85 GLCVTGRLKEAVGL-----LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGF 139
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLF 201
+ Y+ ++L+++ G + A LF + RD++ W +I G V G E LF
Sbjct: 140 ALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEG----LF 195
Query: 202 MWVEFNDGR----SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYS 257
++ + R TFA++ RA + L ++ G++ H+ +K + + V AL+DMY
Sbjct: 196 IYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYF 255
Query: 258 KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISI 317
KC S D FDQ+ + + W S+I+GY HG E L + +M++ G + + T +
Sbjct: 256 KCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLV 315
Query: 318 VIRICVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDA-RHVFDRMHR 375
V+ C ++ + ++ R +G + A+VD + GR+++A V +
Sbjct: 316 VLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCK 375
Query: 376 KNVISWNALIAGYGNHGQ 393
++ W +L+ HG
Sbjct: 376 EHPPVWGSLLGACRIHGN 393
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 290/537 (54%), Gaps = 44/537 (8%)
Query: 105 CADVGASTYDALVNVCVGLRSIRG---------VKKVFNYMISSGFEPDLYMMNRVLLMH 155
C A+ D++ CV L+++ G ++V ++I GF+ D+++ N ++ +
Sbjct: 119 CYSSDAARPDSISISCV-LKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYY 177
Query: 156 VKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR--T 213
KC + ARK+F +M ERDVVSW ++I G SG + + ++ M + +D + T
Sbjct: 178 TKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAM-LACSDFKPNGVT 236
Query: 214 FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP 273
++ +A + G ++H ++ + D + A+I Y+KCGS++ A+ FD+M
Sbjct: 237 VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS 296
Query: 274 EKTTVGWNSIIAGYALHGYSEEALSIYLEMRD---------------------------- 305
EK +V + +II+GY HG +EA++++ EM
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFRE 356
Query: 306 ---SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
G++ + T+S ++ ++L+ K+ HA +R+G ++I T+++D Y+K G
Sbjct: 357 MIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGF 416
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
+ A+ VFD +++I+W A+I Y HG + A +F+QM P+ VT AVLSA
Sbjct: 417 LLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSA 476
Query: 423 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKN 482
++SG S+ IF SM + ++P HYACM+ +L R G L +A I + P +P
Sbjct: 477 FAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAK 536
Query: 483 MWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLK 542
+W ALL + G+LE+ +FA ++L+EM+P NY ++ N+Y +G+ +EA V +K
Sbjct: 537 VWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMK 596
Query: 543 RKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEM 599
R GL+ +P +WIE +K +F+ D S ++KE+Y+ ++ +++ +S YI++ E+
Sbjct: 597 RIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYIRKQEL 653
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 183/403 (45%), Gaps = 57/403 (14%)
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLF 201
+PD ++ ++++ + + A +F ++ R+ S+ ++ Y +AF LFL
Sbjct: 54 KPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFL- 112
Query: 202 MWVE---FNDGRSR----TFATMVRASAG---LGLIQVGRQIHSCALKMGVGGDSFVACA 251
W+ ++ +R + + +++A +G L + RQ+H ++ G D FV
Sbjct: 113 SWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNG 172
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRD-SGAKI 310
+I Y+KC +IE A+ FD+M E+ V WNS+I+GY+ G E+ +Y M S K
Sbjct: 173 MITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKP 232
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
+ T+ V + C + + L + H ++ + D+ A++ FY+K G ++ AR +F
Sbjct: 233 NGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALF 292
Query: 371 DRMHRKNVISWNALIAGYGNHG-------------------------------QGEQAIQ 399
D M K+ +++ A+I+GY HG E+ I
Sbjct: 293 DEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVIN 352
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD------HKVKPRAMHYA 453
F +M+R PN VT ++L + +YS + G EI R+ + +YA
Sbjct: 353 SFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYA 412
Query: 454 CMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGN 496
+ LLG + + D + + W A++TA +HG+
Sbjct: 413 KLGFLLGAQRVFDNC--------KDRSLIAWTAIITAYAVHGD 447
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 174/386 (45%), Gaps = 34/386 (8%)
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
Q+H+ + + D+F+A LI Y++ A FD++ + +N+++ Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 292 YSEEALSIYLEMRDS------GAKIDHFTISIVIRIC-----VRLASLEHAKQAHAALVR 340
+A S++L S A+ D +IS V++ L SL A+Q H ++R
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSL--ARQVHGFVIR 160
Query: 341 HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQM 400
GF SD+ ++ +Y+K +E AR VFD M ++V+SWN++I+GY G E +M
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 401 FEQMLR-ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 459
++ ML PN VT ++V AC S G E+ M +H ++ A +I
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNA-VIGFY 279
Query: 460 GREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYV 519
+ G LD A AL E + A+++ HG L K A EM+ L +
Sbjct: 280 AKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHG---LVKEAMALFSEMESIGLSTWN 335
Query: 520 MLLNIYNSSGKLKEAAGVLQTLKRKGLR--------MLPTCTW---IEVKKQPHAFLCGD 568
+++ + +E + + R G R +LP+ T+ ++ K+ HAF +
Sbjct: 336 AMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN 395
Query: 569 KSHTQTKEIYQKVDEILDEISRHGYI 594
+ IY I+D ++ G++
Sbjct: 396 GADNN---IYVTT-SIIDNYAKLGFL 417
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 270/509 (53%), Gaps = 7/509 (1%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
N H A+ L+ ++ G D TY+ + C L I + V + + G E D++
Sbjct: 111 NDHEAALSLYRRMKFSGLKPD--KFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVH 168
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+ + +++M+ KCG + ARKLF ++ ERD VSW ++I G ++G +A LF M E
Sbjct: 169 INHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEG 228
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
+ RT +M+ A + LG ++ GR + A+ +G +F+ LI MY KCG ++ A+
Sbjct: 229 FEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSAR 288
Query: 267 CAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA 326
F+QM +K V W ++I Y+ +G S EA ++ EM +G D T+S V+ C +
Sbjct: 289 RVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 327 SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIA 386
+LE KQ +I T LVD Y K GR+E+A VF+ M KN +WNA+I
Sbjct: 349 ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Query: 387 GYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 446
Y + G ++A+ +F++M V P+ +TF+ VLSAC ++GL +G F+ MS +
Sbjct: 409 AYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLV 465
Query: 447 PRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEK 506
P+ HY +I+LL R G+LDEA+ + R P +P + M A+L AC ++ + + A
Sbjct: 466 PKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRM 525
Query: 507 LYEMDPGKLC-NYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFL 565
L EM K NYV+ N+ E+A + ++ +G+ P C+WIE++ + FL
Sbjct: 526 LMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFL 585
Query: 566 CG-DKSHTQTKEIYQKVDEILDEISRHGY 593
G D ++ D +++E+ R Y
Sbjct: 586 AGSDYLQCGREDSGSLFDLLVEEMKRERY 614
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 248/461 (53%), Gaps = 4/461 (0%)
Query: 104 DCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD 163
+ D+ +T +++ VC L+ + + V + + + N ++ M++KCG M +
Sbjct: 212 ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 164 ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAG 223
AR +F M RDV++W +I G + GD A L M E + T A++V
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 224 LGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSI 283
+ G+ +H A++ V D + +LI MY+KC ++ F + T W++I
Sbjct: 332 ALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAI 391
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
IAG + +AL ++ MR + + T++ ++ LA L A H L + GF
Sbjct: 392 IAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGF 451
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQ 399
S + A T LV YSK G +E A +F+ + K +V+ W ALI+GYG HG G A+Q
Sbjct: 452 MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQ 511
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 459
+F +M+R V PN +TF + L+ACS+SGL E G +F M +K R+ HY C+++LL
Sbjct: 512 VFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLL 571
Query: 460 GREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYV 519
GR G LDEA+ LI PFEPT +W ALL AC H N++LG+ AA KL+E++P NYV
Sbjct: 572 GRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYV 631
Query: 520 MLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQ 560
+L NIY + G+ K+ V ++ GLR P + IE++
Sbjct: 632 LLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSN 672
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 215/445 (48%), Gaps = 22/445 (4%)
Query: 113 YDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
Y +L+N +SI K + ++I+ G ++++ + + + CG + ARKLF +MP
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVE----FNDGRSRTFATMVRASAGLGLIQ 228
+ ++S+ VI V G Y +A +F+ M E DG + F + +A+ L ++
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF--VAKAAGELKSMK 134
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
+G +H L+ G D +V AL+ MY G +E A+ FD M + + WN++I+GY
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
+GY +AL ++ M + +DH TI ++ +C L LE + H + G I
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
ALV+ Y K GRM++AR VFDRM R++VI+W +I GY G E A+++ M E
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 409 VIPNHVTFLAVLSACSYS-----GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 463
V PN VT +++S C + G GW + + D ++ +I + +
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE------TSLISMYAKCK 368
Query: 464 LLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE--LGKFAAEKLYEMDPGKLCNYVML 521
+D F + A T W A++ C + + LG F + +++P + L
Sbjct: 369 RVDLCFRVFSGASKYHT-GPWSAIIAGCVQNELVSDALGLFKRMRREDVEP-NIATLNSL 426
Query: 522 LNIYNSSGKLKEAAGVLQTLKRKGL 546
L Y + L++A + L + G
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKTGF 451
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 221/495 (44%), Gaps = 45/495 (9%)
Query: 89 HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMM 148
+ +A+ +F + EG TY + L+S++ V ++ S F D Y+
Sbjct: 96 YHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQ 155
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
N +L M++ G + AR +F M RDV+SW T+I G +G ++A +F +M E D
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
T +M+ L +++GR +H + +G V AL++MY KCG +++A+
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
FD+M + + W +I GY G E AL + M+ G + + TI+ ++ +C +
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
K H VR SDI+ T+L+ Y+K R++ VF + + W+A+IAG
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGC 395
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVT----------------------------FLAVL 420
+ A+ +F++M RE V PN T F++ L
Sbjct: 396 VQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSL 455
Query: 421 SACS-----YS--GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FA 470
A + YS G E +IF + HK K + + +I G G A F
Sbjct: 456 DAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVL-WGALISGYGMHGDGHNALQVFM 514
Query: 471 LIRRAPFEPTKNMWVALLTACRMHGNLELG----KFAAEKLYEMDPGKLCNYVMLLNIYN 526
+ R+ P + + + L AC G +E G +F E + + +Y ++++
Sbjct: 515 EMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTL--ARSNHYTCIVDLLG 572
Query: 527 SSGKLKEAAGVLQTL 541
+G+L EA ++ T+
Sbjct: 573 RAGRLDEAYNLITTI 587
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/481 (32%), Positives = 266/481 (55%), Gaps = 5/481 (1%)
Query: 110 ASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFG 169
+ST+ + C+ + + V+ + G++ D+++ + VL +++KCG M +A LFG
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 170 DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFAT-MVRASAGLGLIQ 228
M +RDV+ W T++ G +G +A + M E GR R +++AS LG +
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE-GFGRDRVVMLGLLQASGDLGDTK 234
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
+GR +H + G+ + V +L+DMY+K G IE A F +M KT V W S+I+G+A
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALV-RHGFGSDI 347
+G + +A +EM+ G + D T+ V+ C ++ SL+ + H ++ RH D
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVL--DR 352
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE 407
V TAL+D YSK G + +R +F+ + RK+++ WN +I+ YG HG G++ + +F +M
Sbjct: 353 VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 408 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 467
+ P+H TF ++LSA S+SGL E+G F M +K++P HY C+I+LL R G ++E
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEE 472
Query: 468 AFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNS 527
A +I + +WVALL+ C H NL +G AA K+ +++P + ++ N + +
Sbjct: 473 ALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFAT 532
Query: 528 SGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDE 587
+ K KE A V + ++ + +P + IEV + FL D SH + + Q + + E
Sbjct: 533 ANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTE 592
Query: 588 I 588
I
Sbjct: 593 I 593
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 217/454 (47%), Gaps = 41/454 (9%)
Query: 127 RGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD---ARKLFGDMPERDVVSWMTVI 183
R + ++ ++IS+G + ++R L+ CG + + ARK+F ++P+R V + ++I
Sbjct: 31 RHITQIHAFVISTGNLLNGSSISRDLI--ASCGRIGEISYARKVFDELPQRGVSVYNSMI 88
Query: 184 GGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVG 243
+ E L+ M E S TF ++A +++ G + A+ G
Sbjct: 89 VVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYK 148
Query: 244 GDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM 303
D FV +++++Y KCG +++A+ F +M ++ + W +++ G+A G S +A+ Y EM
Sbjct: 149 NDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREM 208
Query: 304 RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRM 363
++ G D + +++ L + + H L R G ++V T+LVD Y+K G +
Sbjct: 209 QNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFI 268
Query: 364 EDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSAC 423
E A VF RM K +SW +LI+G+ +G +A + +M P+ VT + VL AC
Sbjct: 269 EVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVAC 328
Query: 424 SYSGLSERGWEIFYSMSRDH---KVKPRA---MHYAC--------MIELLGREGLL---- 465
S G + G + + + H +V A M+ C + E +GR+ L+
Sbjct: 329 SQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNT 388
Query: 466 -----------DEAFALIRR---APFEPTKNMWVALLTACRMHGNLELGKFAAEKL---Y 508
E +L + + EP + +LL+A G +E G+ + Y
Sbjct: 389 MISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKY 448
Query: 509 EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLK 542
++ P + +YV L+++ +G+++EA ++ + K
Sbjct: 449 KIQPSEK-HYVCLIDLLARAGRVEEALDMINSEK 481
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 255/463 (55%), Gaps = 38/463 (8%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDS 189
KK+ +I +GF+PDL + ++L++H+KCG + AR++F ++P+ + ++ +I G +
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 190 GDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQV-----GRQIHSCALKMGVGG 244
G E L M T + +++AS G + R +H+ +K V
Sbjct: 114 GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVEL 173
Query: 245 DSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEA-------- 296
D + AL+D Y K G +E A+ F+ M ++ V S+I+GY G+ E+A
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 297 ------------------------LSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAK 332
+ +Y+ M+ +G + T + VI C L S E +
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 333 QAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHG 392
Q HA +++ G + I ++L+D Y+K G + DAR VFD+M KNV SW ++I GYG +G
Sbjct: 294 QVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNG 353
Query: 393 QGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 452
E+A+++F +M R+ PN+VTFL LSACS+SGL ++G+EIF SM RD+ +KP+ HY
Sbjct: 354 NPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY 413
Query: 453 ACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDP 512
AC+++L+GR G L++AF R P P ++W ALL++C +HGN+EL AA +L++++
Sbjct: 414 ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNA 473
Query: 513 GKLCN-YVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTW 554
K Y+ L N+Y S+ K + + + +KR+ + +W
Sbjct: 474 DKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 162/380 (42%), Gaps = 74/380 (19%)
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
+ G++IH+ +K G D ++ L+ ++ KCG + A+ FD++P+ T +N +I+GY
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL-----EHAKQAHAALVRHG 342
HG +E L + M SG K D +T+S+V++ S + HA +++
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHG---------- 392
D V TALVD Y K G++E AR VF+ M +NV+ ++I+GY N G
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 393 -------------------QGEQA---IQMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 430
GE A + M+ M R PN TF +V+ ACS E
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 431 RGWEIFYSMSR------------------------------DHKVKPRAMHYACMIELLG 460
G ++ + + D + + MI+ G
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 461 REGLLDEAFALIRRAP---FEPTKNMWVALLTACRMHGNLELGKFAAEKL---YEMDPGK 514
+ G +EA L R EP ++ L+AC G ++ G E + Y M P K
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP-K 409
Query: 515 LCNYVMLLNIYNSSGKLKEA 534
+ +Y ++++ +G L +A
Sbjct: 410 MEHYACIVDLMGRAGDLNKA 429
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 7/286 (2%)
Query: 115 ALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER 174
ALV+ V + + VF M + ++ ++ ++ G + DA ++F +
Sbjct: 180 ALVDTYVKSGKLESARTVFETMK----DENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK 235
Query: 175 DVVSWMTVIGGLVDSGDYSE-AFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQI 233
D+V + ++ G SG+ ++ + +++ M TFA+++ A + L +VG+Q+
Sbjct: 236 DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQV 295
Query: 234 HSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYS 293
H+ +K GV + +L+DMY+KCG I DA+ FDQM EK W S+I GY +G
Sbjct: 296 HAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNP 355
Query: 294 EEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR-HGFGSDIVANTA 352
EEAL ++ M++ + ++ T + C ++ + ++ R + +
Sbjct: 356 EEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYAC 415
Query: 353 LVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQA 397
+VD + G + A M R + W AL++ HG E A
Sbjct: 416 IVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELA 461
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 14/194 (7%)
Query: 111 STYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
ST+ +++ C L S ++V ++ SG + M + +L M+ KCG + DAR++F
Sbjct: 274 STFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQ 333
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVG 230
M E++V SW ++I G +G+ EA LF M + TF + A + GL+ G
Sbjct: 334 MQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKG 393
Query: 231 RQI-------HSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG-WNS 282
+I +S KM AC ++D+ + G + A MPE+ W +
Sbjct: 394 YEIFESMQRDYSMKPKM-----EHYAC-IVDLMGRAGDLNKAFEFARAMPERPDSDIWAA 447
Query: 283 IIAGYALHGYSEEA 296
+++ LHG E A
Sbjct: 448 LLSSCNLHGNVELA 461
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 162/513 (31%), Positives = 269/513 (52%), Gaps = 8/513 (1%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+AME + + G D T+ +L+ + + VKKV GF+ D Y+ +
Sbjct: 144 DAMETYREMRANGILPD--KYTFPSLLKGSDAME-LSDVKKVHGLAFKLGFDSDCYVGSG 200
Query: 151 VLLMHVKCGLMLDARKLFGDMPERD-VVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDG 209
++ + K + DA+K+F ++P+RD V W ++ G + +A +F M E
Sbjct: 201 LVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGV 260
Query: 210 RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
T +++ A G I GR IH A+K G G D V+ ALIDMY K +E+A F
Sbjct: 261 SRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIF 320
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
+ M E+ WNS++ + G + L+++ M SG + D T++ V+ C RLASL
Sbjct: 321 EAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLR 380
Query: 330 HAKQAHAALVRHGF----GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALI 385
++ H ++ G S+ + +L+D Y K G + DAR VFD M K+ SWN +I
Sbjct: 381 QGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMI 440
Query: 386 AGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 445
GYG GE A+ MF M R V P+ +TF+ +L ACS+SG G M + +
Sbjct: 441 NGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNI 500
Query: 446 KPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAE 505
P + HYAC+I++LGR L+EA+ L P +W ++L++CR+HGN +L A +
Sbjct: 501 LPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGK 560
Query: 506 KLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFL 565
+L+E++P YV++ N+Y +GK +E V ++++ ++ P C+WI +K H F
Sbjct: 561 RLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFF 620
Query: 566 CGDKSHTQTKEIYQKVDEILDEISRHGYIKENE 598
G+++H + K I+ + ++ + H Y+ ++
Sbjct: 621 TGNQTHPEFKSIHDWLSLVISHMHGHEYMTVDD 653
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 213/447 (47%), Gaps = 45/447 (10%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLL-MHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVD 188
+++ +M+ GF D L+ M+ KCGLM A +FG ERDV + +I G V
Sbjct: 80 QQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVV 138
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV 248
+G +A + M TF ++++ S + L V +++H A K+G D +V
Sbjct: 139 NGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYV 197
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEK-TTVGWNSIIAGYALHGYSEEALSIYLEMRDSG 307
L+ YSK S+EDAQ FD++P++ +V WN+++ GY+ E+AL ++ +MR+ G
Sbjct: 198 GSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG 257
Query: 308 AKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDAR 367
+ TI+ V+ +++ + H V+ G GSDIV + AL+D Y K +E+A
Sbjct: 258 VGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEAN 317
Query: 368 HVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSG 427
+F+ M +++ +WN+++ + G + + +FE+ML + P+ VT VL C
Sbjct: 318 SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLA 377
Query: 428 LSERGWEIFYSMS----------------------------RDHKVKPRAMH------YA 453
+G EI M RD ++ +M +
Sbjct: 378 SLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWN 437
Query: 454 CMIELLGREG---LLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGK-FAA--EKL 507
MI G + L + F+ + RA +P + +V LL AC G L G+ F A E +
Sbjct: 438 IMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETV 497
Query: 508 YEMDPGKLCNYVMLLNIYNSSGKLKEA 534
Y + P +Y ++++ + KL+EA
Sbjct: 498 YNILPTS-DHYACVIDMLGRADKLEEA 523
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 128/245 (52%), Gaps = 5/245 (2%)
Query: 230 GRQIHSCALKMGVGGDSFVA-CALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
G+QIH ++ G DS A +L++MY+KCG + A F E+ G+N++I+G+
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFV 137
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
++G +A+ Y EMR +G D +T +++ + L K+ H + GF SD
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCY 196
Query: 349 ANTALVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE 407
+ LV YSK+ +EDA+ VFD + R + + WNAL+ GY + E A+ +F +M E
Sbjct: 197 VGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE 256
Query: 408 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 467
V + T +VLSA + SG + G I + ++ + +I++ G+ L+E
Sbjct: 257 GVGVSRHTITSVLSAFTVSGDIDNGRSI-HGLAVKTGSGSDIVVSNALIDMYGKSKWLEE 315
Query: 468 AFALI 472
A ++
Sbjct: 316 ANSIF 320
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 278/531 (52%), Gaps = 28/531 (5%)
Query: 67 QIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSI 126
Q+ +P+ S I ++ +A +F ++ G AD TY L+ C G +
Sbjct: 76 QVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFAD--NFTYPFLLKACSGQSWL 133
Query: 127 RGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLM--LDARKLFGDMPERDVVSWMTVIG 184
VK + N++ G D+Y+ N ++ + +CG + DA KLF M ERD VSW +++G
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLG 193
Query: 185 GLVDSGDYSEAFGLF-------LFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCA 237
GLV +G+ +A LF L W DG +A S L + + ++ +
Sbjct: 194 GLVKAGELRDARRLFDEMPQRDLISWNTMLDG----YARCREMSKAFELFEKMPERNTVS 249
Query: 238 LKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP--EKTTVGWNSIIAGYALHGYSEE 295
V G YSK G +E A+ FD+MP K V W IIAGYA G +E
Sbjct: 250 WSTMVMG-----------YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKE 298
Query: 296 ALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVD 355
A + +M SG K D + ++ C L + H+ L R GS+ AL+D
Sbjct: 299 ADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLD 358
Query: 356 FYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVT 415
Y+K G ++ A VF+ + +K+++SWN ++ G G HG G++AI++F +M RE + P+ VT
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 416 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRA 475
F+AVL +C+++GL + G + FYSM + + + P+ HY C+++LLGR G L EA +++
Sbjct: 419 FIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Query: 476 PFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAA 535
P EP +W ALL ACRMH +++ K + L ++DP NY +L NIY ++ + A
Sbjct: 479 PMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVA 538
Query: 536 GVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILD 586
+ +K G+ + +E++ H F DKSH ++ +IYQ + +++
Sbjct: 539 DIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 152/354 (42%), Gaps = 46/354 (12%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
+Q+H+ ++ + D +A LI S C A F+Q+ E NS+I +A +
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
+A ++ EM+ G D+FT +++ C + L K H + + G SDI
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP 155
Query: 351 TALVDFYS---------------------------------KWGRMEDARHVFDRMHRKN 377
AL+D YS K G + DAR +FD M +++
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 378 VISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFY 437
+ISWN ++ GY + +A ++FE+M ER N V++ ++ S +G E +F
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKM-PER---NTVSWSTMVMGYSKAGDMEMARVMFD 271
Query: 438 SMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTK---NMWVALLTACRMH 494
M K + + +I +GLL EA L+ + K +++L AC
Sbjct: 272 KMPLPAK---NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 495 GNLELGKFAAEKLYEMDPGKLCNYVM--LLNIYNSSGKLKEAAGVLQTLKRKGL 546
G L LG L + G YV+ LL++Y G LK+A V + +K L
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNA-YVLNALLDMYAKCGNLKKAFDVFNDIPKKDL 381
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 265/485 (54%), Gaps = 10/485 (2%)
Query: 67 QIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGAS--TYDALVNVCVGLR 124
+I K + I + C H +A+ LF+ + E DV A+ TY +++ C L
Sbjct: 72 RISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRE----DVKANQFTYGSVLKSCKDLG 127
Query: 125 SIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIG 184
++ ++ + +L + + +L ++ +CG M +AR F M ERD+VSW +I
Sbjct: 128 CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMID 187
Query: 185 GLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGG 244
G + +F LF M E TF +++RAS + +++ ++H A+K+G G
Sbjct: 188 GYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGR 247
Query: 245 DSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGY-SEEALSIYLEM 303
S + +L++ Y KCGS+ +A + ++ + ++I G++ + +A I+ +M
Sbjct: 248 SSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
Query: 304 RDSGAKIDHFTISIVIRICVRLASLEHAKQAHA-ALVRHGFGSDIVANTALVDFYSKWGR 362
K+D +S +++IC +AS+ +Q H AL D+ +L+D Y+K G
Sbjct: 308 IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGE 367
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
+EDA F+ M K+V SW +LIAGYG HG E+AI ++ +M ER+ PN VTFL++LSA
Sbjct: 368 IEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSA 427
Query: 423 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR--RAPFEPT 480
CS++G +E GW+I+ +M H ++ R H +C+I++L R G L+EA+ALIR +
Sbjct: 428 CSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLS 487
Query: 481 KNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQT 540
+ W A L ACR HGN++L K AA +L M+P K NY+ L ++Y ++G A +
Sbjct: 488 SSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKL 547
Query: 541 LKRKG 545
+K G
Sbjct: 548 MKESG 552
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 179/363 (49%), Gaps = 2/363 (0%)
Query: 137 ISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAF 196
I++GF +L + + ++ +++K G + ARKLF + +RDVVSW +I G + +A
Sbjct: 39 ITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDAL 98
Query: 197 GLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMY 256
LF M E T+ +++++ LG ++ G QIH K G+ V AL+ +Y
Sbjct: 99 LLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLY 158
Query: 257 SKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTIS 316
++CG +E+A+ FD M E+ V WN++I GY + ++ + S++ M G K D FT
Sbjct: 159 ARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFG 218
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
++R + + LE + H ++ GFG +LV+ Y K G + +A + + ++
Sbjct: 219 SLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR 278
Query: 377 NVISWNALIAGYGNHGQ-GEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
+++S ALI G+ A +F+ M+R + + V ++L C+ G +I
Sbjct: 279 DLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQI 338
Query: 436 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHG 495
+ +++ +I++ + G +++A + ++ W +L+ HG
Sbjct: 339 HGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRS-WTSLIAGYGRHG 397
Query: 496 NLE 498
N E
Sbjct: 398 NFE 400
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 269/495 (54%), Gaps = 4/495 (0%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKL-FGD 170
T +++ C ++ + V ++ G E LY+ N ++ M+ C + ++A L F D
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRD 172
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVG 230
+ ++ V+W T+I G GD ++ M +E + VRASA + + G
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTG 232
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
+QIH+ +K G + V +++D+Y +CG + +A+ F +M +K + WN++I+
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-R 291
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
S EAL ++ G + +T + ++ C +A+L +Q H + R GF ++
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 351 TALVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
AL+D Y+K G + D++ VF + R+N++SW +++ GYG+HG G +A+++F++M+ +
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 410 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 469
P+ + F+AVLSAC ++GL E+G + F M ++ + P Y C+++LLGR G + EA+
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAY 471
Query: 470 ALIRRAPFEPTKNMWVALLTACRMHG-NLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSS 528
L+ R PF+P ++ W A+L AC+ H N + + AA K+ E+ P + YVML IY +
Sbjct: 472 ELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAE 531
Query: 529 GKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEI 588
GK + A V + ++ G + +WI V+ Q +F DK +Y + +++E
Sbjct: 532 GKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEET 591
Query: 589 SRHGYIKENEMLLPD 603
GY+ E + L+ D
Sbjct: 592 REAGYVPELDSLVND 606
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 212/436 (48%), Gaps = 40/436 (9%)
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+ +++ + + GL+ +AR LF +MP+RDVV+W +I G S + A+ F M +
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
T ++++++ + ++ G +H +K+G+ G +V A+++MY+ C +A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 267 C-AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRL 325
C F + K V W ++I G+ G L +Y +M A++ + I+I +R +
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 326 ASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALI 385
S+ KQ HA++++ GF S++ +++D Y + G + +A+H F M K++I+WN LI
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 386 AGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS-----------YSGLSERGWE 434
+ +A+ MF++ + +PN TF ++++AC+ + + RG+
Sbjct: 287 SEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 435 IFYSMSR--------------DHKV------KPRAMHYACMIELLGREGLLDEAFALIRR 474
++ +V + + + M+ G G EA L +
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 475 ---APFEPTKNMWVALLTACRMHGNLELG-KF--AAEKLYEMDPGKLCNYVMLLNIYNSS 528
+ P + +++A+L+ACR G +E G K+ E Y ++P + Y ++++ +
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDI-YNCVVDLLGRA 464
Query: 529 GKLKEAAGVLQTLKRK 544
GK+ EA +++ + K
Sbjct: 465 GKIGEAYELVERMPFK 480
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 242/441 (54%), Gaps = 11/441 (2%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY L+ C L ++ K ++ SG E ++ +L M+VKCG + +AR++F +
Sbjct: 244 TYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH 303
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFM-WVEFNDGRSRTFATMVRASAGLGLIQ-- 228
D+V W +I G +G +EA LF M VE T+ +G GLI+
Sbjct: 304 SHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP----NCVTIASVLSGCGLIENL 359
Query: 229 -VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
+GR +H ++K+G+ D+ VA AL+ MY+KC DA+ F+ EK V WNSII+G+
Sbjct: 360 ELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGF 418
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF--GS 345
+ +G EAL ++ M + T++ + C L SL HA V+ GF S
Sbjct: 419 SQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASS 478
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
+ TAL+DFY+K G + AR +FD + KN I+W+A+I GYG G ++++FE+ML
Sbjct: 479 SVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEML 538
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
+++ PN TF ++LSAC ++G+ G + F SM +D+ P HY CM+++L R G L
Sbjct: 539 KKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGEL 598
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIY 525
++A +I + P +P + A L C MH +LG+ +K+ ++ P YV++ N+Y
Sbjct: 599 EQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLY 658
Query: 526 NSSGKLKEAAGVLQTLKRKGL 546
S G+ +A V +K++GL
Sbjct: 659 ASDGRWNQAKEVRNLMKQRGL 679
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 239/491 (48%), Gaps = 47/491 (9%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
E ++L+++L G D + + C L+ + KK+ ++ D ++
Sbjct: 125 EVVKLYDLLMKHGFRYD--DIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTG 181
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND-- 208
+L M+ KCG + A K+F D+ R+VV W ++I G V + D E GL LF + N+
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN-DLCEE-GLVLFNRMRENNVL 239
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
G T+ T++ A L + G+ H C +K G+ S + +L+DMY KCG I +A+
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
F++ V W ++I GY +G EALS++ +M+ K + TI+ V+ C + +L
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
E + H ++ G VAN ALV Y+K + DA++VF+ K++++WN++I+G+
Sbjct: 360 ELGRSVHGLSIKVGIWDTNVAN-ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGF 418
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI------------- 435
+G +A+ +F +M E V PN VT ++ SAC+ G G +
Sbjct: 419 SQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASS 478
Query: 436 ----------FYSMSRDHKV---------KPRAMHYACMIELLGREGLLD---EAFALIR 473
FY+ D + + + ++ MI G++G E F +
Sbjct: 479 SVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEML 538
Query: 474 RAPFEPTKNMWVALLTACRMHGNLELGK--FAA-EKLYEMDPGKLCNYVMLLNIYNSSGK 530
+ +P ++ + ++L+AC G + GK F++ K Y P +Y ++++ +G+
Sbjct: 539 KKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTK-HYTCMVDMLARAGE 597
Query: 531 LKEAAGVLQTL 541
L++A +++ +
Sbjct: 598 LEQALDIIEKM 608
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 210/476 (44%), Gaps = 48/476 (10%)
Query: 116 LVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERD 175
L++ C + S+R V + +G D+ + +++ ++ G DAR +F +PE D
Sbjct: 50 LLSKCTNIDSLRQSHGV---LTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 176 VVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHS 235
W ++ + + E L+ + F+ ++A L + G++IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH- 165
Query: 236 CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEE 295
C L D+ V L+DMY+KCG I+ A F+ + + V W S+IAGY + EE
Sbjct: 166 CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 296 ALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVD 355
L ++ MR++ + +T +I C +L++L K H LV+ G T+L+D
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 356 FYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVT 415
Y K G + +AR VF+ +++ W A+I GY ++G +A+ +F++M + PN VT
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 416 FLAVLSAC----------SYSGLSERG--WEIFYS-----------MSRDHKV------K 446
+VLS C S GLS + W+ + +RD K +
Sbjct: 346 IASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESE 405
Query: 447 PRAMHYACMIELLGREGLLDEAFALIRRAPFE---PTKNMWVALLTACRMHGNLELGKFA 503
+ + +I + G + EA L R E P +L +AC G+L +G +
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG--S 463
Query: 504 AEKLYEMDPGKLCNY-----VMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTW 554
+ Y + G L + LL+ Y G + A + T++ K T TW
Sbjct: 464 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN-----TITW 514
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 60/126 (47%)
Query: 299 IYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYS 358
+ L + G+ + + S + + +++ +Q+H L +G DI T LV Y
Sbjct: 28 LILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYG 87
Query: 359 KWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLA 418
+G +DAR VFD++ + W ++ Y + + + +++++ +++ + + F
Sbjct: 88 FFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSK 147
Query: 419 VLSACS 424
L AC+
Sbjct: 148 ALKACT 153
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/488 (33%), Positives = 271/488 (55%), Gaps = 24/488 (4%)
Query: 70 KPS-TPGLCSQIEKLGLCNRHREAMELFE--ILELEGDCADVGAS-----TYDALVNVCV 121
KPS TP L IEK + HR +E + I +LE A G S + +L+ C
Sbjct: 51 KPSPTPLL---IEKQSI---HRTQLEALDSVITDLE-TSAQKGISLTEPEIFASLLETCY 103
Query: 122 GLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDV--VSW 179
LR+I +V + + +L + ++++ ++ CG A ++F M +RD +W
Sbjct: 104 SLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAW 163
Query: 180 MTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALK 239
++I G + G Y +A L+ M + TF +++A G+G +Q+G IH +K
Sbjct: 164 NSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVK 223
Query: 240 MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSI 299
G G D +V AL+ MY+KCG I A+ FD +P K V WNS++ GY HG EAL I
Sbjct: 224 EGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDI 283
Query: 300 YLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSK 359
+ M +G + D IS V+ R+ S +H +Q H ++R G ++ AL+ YSK
Sbjct: 284 FRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSK 340
Query: 360 WGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAV 419
G++ A +FD+M ++ +SWNA+I+ H + ++ FEQM R P+ +TF++V
Sbjct: 341 RGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSV 397
Query: 420 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI-RRAPFE 478
LS C+ +G+ E G +F MS+++ + P+ HYACM+ L GR G+++EA+++I + E
Sbjct: 398 LSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLE 457
Query: 479 PTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVL 538
+W ALL AC +HGN ++G+ AA++L+E++P N+ +L+ IY+ + + ++ V
Sbjct: 458 AGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVR 517
Query: 539 QTLKRKGL 546
Q + +GL
Sbjct: 518 QMMVDRGL 525
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 188/371 (50%), Gaps = 35/371 (9%)
Query: 214 FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP 273
FA+++ L I G ++H + + ++ L+ +Y+ CG E A FD+M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 274 EK--TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA 331
++ + WNS+I+GYA G E+A+++Y +M + G K D FT V++ C + S++
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 332 KQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNH 391
+ H LV+ GFG D+ ALV Y+K G + AR+VFD + K+ +SWN+++ GY +H
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 392 GQGEQAIQMFEQMLRERVIPNHVTFLAVLS-ACSYS-GLSERGWEIFYSMSRDHKV---- 445
G +A+ +F M++ + P+ V +VL+ S+ G GW I M + V
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANAL 334
Query: 446 -----KPRAMHYACMI--ELLGREGLLDEA--------------FALIRRAPFEPTKNMW 484
K + AC I ++L R+ + A F + RA +P +
Sbjct: 335 IVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRANAKPDGITF 394
Query: 485 VALLTACRMHGNLELGK--FA-AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
V++L+ C G +E G+ F+ K Y +DP K+ +Y ++N+Y +G ++EA ++ +
Sbjct: 395 VSVLSLCANTGMVEDGERLFSLMSKEYGIDP-KMEHYACMVNLYGRAGMMEEAYSMI--V 451
Query: 542 KRKGLRMLPTC 552
+ GL PT
Sbjct: 452 QEMGLEAGPTV 462
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 279/546 (51%), Gaps = 40/546 (7%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV----KKVFNYMISSGFEPDLY 146
E + L+ + EG D + T+ L+N GL+ G KK+ +++ G +LY
Sbjct: 117 EGVRLYLNMLKEGVTPD--SHTFPFLLN---GLKRDGGALACGKKLHCHVVKFGLGSNLY 171
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+ N ++ M+ CGLM AR +F + DV SW +I G +Y E+ L + M
Sbjct: 172 VQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNL 231
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG------ 260
S T ++ A + + + +++H + + AL++ Y+ CG
Sbjct: 232 VSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAV 291
Query: 261 -------------------------SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEE 295
+++ A+ FDQMP + + W +I GY G E
Sbjct: 292 RIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNE 351
Query: 296 ALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVD 355
+L I+ EM+ +G D FT+ V+ C L SLE + + ++ +D+V AL+D
Sbjct: 352 SLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALID 411
Query: 356 FYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVT 415
Y K G E A+ VF M +++ +W A++ G N+GQG++AI++F QM + P+ +T
Sbjct: 412 MYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 416 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRA 475
+L VLSAC++SG+ ++ + F M DH+++P +HY CM+++LGR GL+ EA+ ++R+
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
Query: 476 PFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAA 535
P P +W ALL A R+H + + + AA+K+ E++P Y +L NIY + K+
Sbjct: 532 PMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLR 591
Query: 536 GVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIK 595
V + + ++ P + IEV H F+ GDKSH Q++EIY K++E+ E + Y+
Sbjct: 592 EVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLP 651
Query: 596 ENEMLL 601
+ LL
Sbjct: 652 DTSELL 657
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 220/503 (43%), Gaps = 78/503 (15%)
Query: 111 STYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVK--CGLMLDARKLF 168
S + +++ VC ++ K++ + I+ G P+ ++ + G + A KLF
Sbjct: 35 SRFISILGVC---KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLF 91
Query: 169 GDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRA-SAGLGLI 227
+PE DVV W +I G E L+L M E S TF ++ G +
Sbjct: 92 VKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGAL 151
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
G+++H +K G+G + +V AL+ MYS CG ++ A+ FD+ ++ WN +I+GY
Sbjct: 152 ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGY 211
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHA----------- 336
EE++ + +EM + T+ +V+ C ++ + K+ H
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 337 ----ALV----------------RHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
ALV R D+++ T++V Y + G ++ AR FD+M +
Sbjct: 272 RLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSY----------- 425
+ ISW +I GY G +++++F +M +IP+ T ++VL+AC++
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 426 ------------------------SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGR 461
G SE+ ++F+ M + K AM G+
Sbjct: 392 TYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQ 451
Query: 462 EGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL---YEMDPGKLCNY 518
E + + F ++ +P ++ +L+AC G ++ + K+ + ++P L +Y
Sbjct: 452 EAI--KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS-LVHY 508
Query: 519 VMLLNIYNSSGKLKEAAGVLQTL 541
++++ +G +KEA +L+ +
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKM 531
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 150/345 (43%), Gaps = 34/345 (9%)
Query: 87 NRHREAMELFEIL-ELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDL 145
NR +E E E+L E+E + + T +++ C ++ K+V Y+ EP L
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 146 YMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFM--- 202
+ N ++ + CG M A ++F M RDV+SW +++ G V+ G+ A F M
Sbjct: 272 RLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 203 ----WVEFNDGRSR------------------------TFATMVRASAGLGLIQVGRQIH 234
W DG R T +++ A A LG +++G I
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 235 SCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSE 294
+ K + D V ALIDMY KCG E AQ F M ++ W +++ G A +G +
Sbjct: 392 TYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQ 451
Query: 295 EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAAL-VRHGFGSDIVANTAL 353
EA+ ++ +M+D + D T V+ C ++ A++ A + H +V +
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 354 VDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQA 397
VD + G +++A + +M N I W AL+ H A
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMA 556
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 151/323 (46%), Gaps = 10/323 (3%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSK--CGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
+Q+HS ++ GV + L + G + A F ++PE V WN++I G++
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA-SLEHAKQAHAALVRHGFGSDI 347
E + +YL M G D T ++ R +L K+ H +V+ G GS++
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNL 170
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE 407
ALV YS G M+ AR VFDR +++V SWN +I+GY + E++I++ +M R
Sbjct: 171 YVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERN 230
Query: 408 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 467
V P VT L VLSACS + + +S + K +P ++ G +D
Sbjct: 231 LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS-ECKTEPSLRLENALVNAYAACGEMDI 289
Query: 468 AFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNS 527
A + R + W +++ GNL+L + +++ D ++ ++++ Y
Sbjct: 290 AVRIFRSMKARDVIS-WTSIVKGYVERGNLKLARTYFDQMPVRDR---ISWTIMIDGYLR 345
Query: 528 SGKLKEAAGVLQTLKRKGLRMLP 550
+G E+ + + ++ G M+P
Sbjct: 346 AGCFNESLEIFREMQSAG--MIP 366
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 158/506 (31%), Positives = 275/506 (54%), Gaps = 11/506 (2%)
Query: 90 REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMN 149
+ A L ++E++ + A T+ L+ + +K+V ++ G + ++ + N
Sbjct: 184 KTAFWLLGLMEMKA-AVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICN 242
Query: 150 RVLLMHVKCGLMLDARKLFGDMP-ERDVVSWMTVIGGLVDSGDYSEAFGLFLFM---WVE 205
++ + CG + DA+++F + +D++SW ++I G AF LF+ M WVE
Sbjct: 243 AMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVE 302
Query: 206 FNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSK--CGSIE 263
+ T+ ++ A +G G+ +H +K G+ + ALI MY + G++E
Sbjct: 303 TD---IYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTME 359
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
DA F+ + K + WNSII G+A G SE+A+ + +R S K+D + S ++R C
Sbjct: 360 DALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-NVISWN 382
LA+L+ +Q HA + GF S+ ++L+ YSK G +E AR F ++ K + ++WN
Sbjct: 420 DLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWN 479
Query: 383 ALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 442
A+I GY HG G+ ++ +F QM + V +HVTF A+L+ACS++GL + G E+ M
Sbjct: 480 AMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPV 539
Query: 443 HKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKF 502
+K++PR HYA ++LLGR GL+++A LI P P + L CR G +E+
Sbjct: 540 YKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQ 599
Query: 503 AAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPH 562
A L E++P YV L ++Y+ K +E A V + +K +G++ +P +WIE++ Q
Sbjct: 600 VANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVK 659
Query: 563 AFLCGDKSHTQTKEIYQKVDEILDEI 588
AF D+S+ ++IY + ++ E+
Sbjct: 660 AFNAEDRSNPLCQDIYMMIKDLTQEM 685
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 180/356 (50%), Gaps = 21/356 (5%)
Query: 135 YMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSE 194
Y I G D+Y+ NR+L ++K G + A LF +MP+RD VSW T+I G G +
Sbjct: 25 YAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLED 84
Query: 195 AFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALID 254
A+ LF M +D +F+ +++ A + +G Q+H +K G + +V +L+D
Sbjct: 85 AWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVD 144
Query: 255 MYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSI--YLEMRDSGAKIDH 312
MY+KC +EDA AF ++ E +V WN++IAG+ + A + +EM+ + +D
Sbjct: 145 MYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK-AAVTMDA 203
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
T + ++ + KQ HA +++ G +I A++ Y+ G + DA+ VFD
Sbjct: 204 GTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDG 263
Query: 373 M-HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 431
+ K++ISWN++IAG+ H E A ++F QM R V + T+ +LSACS
Sbjct: 264 LGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS------- 316
Query: 432 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVAL 487
+H++ +++H M+ G E + ALI PT M AL
Sbjct: 317 --------GEEHQIFGKSLH--GMVIKKGLEQVTSATNALISMYIQFPTGTMEDAL 362
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 207/432 (47%), Gaps = 16/432 (3%)
Query: 86 CNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDL 145
C + +A LF ++ G +DV ++ L+ ++ ++V +I G+E ++
Sbjct: 79 CGKLEDAWCLFTCMKRSG--SDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 146 YMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFM--- 202
Y+ + ++ M+ KC + DA + F ++ E + VSW +I G V D AF L M
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 203 -WVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGS 261
V + G TFA ++ + +Q+H+ LK+G+ + + A+I Y+ CGS
Sbjct: 197 AAVTMDAG---TFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGS 253
Query: 262 IEDAQCAFDQM-PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
+ DA+ FD + K + WNS+IAG++ H E A ++++M+ + D +T + ++
Sbjct: 254 VSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLS 313
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKW--GRMEDARHVFDRMHRKNV 378
C K H +++ G A AL+ Y ++ G MEDA +F+ + K++
Sbjct: 314 ACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDL 373
Query: 379 ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 438
ISWN++I G+ G E A++ F + + + F A+L +CS + G +I ++
Sbjct: 374 ISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI-HA 432
Query: 439 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE 498
++ + +I + + G+++ A ++ + + W A++ HG
Sbjct: 433 LATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG--- 489
Query: 499 LGKFAAEKLYEM 510
LG+ + + +M
Sbjct: 490 LGQVSLDLFSQM 501
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 251/473 (53%), Gaps = 36/473 (7%)
Query: 115 ALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER 174
+LVNV +R + +YM+ EPD + ++ ++ + CG + ++R LF R
Sbjct: 227 SLVNVYAKCGDLR----MASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNR 282
Query: 175 DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIH 234
V+ W ++I G + + EA LF M E + SRT A ++ A GLG ++ G+Q+H
Sbjct: 283 CVILWNSMISGYIANNMKMEALVLFNEMRNETRED-SRTLAAVINACIGLGFLETGKQMH 341
Query: 235 SCALKMGVGGDSFVACALIDMYSKCGS-------------------------------IE 263
A K G+ D VA L+DMYSKCGS I+
Sbjct: 342 CHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRID 401
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
DA+ F+++ K+ + WNS+ G++ +G + E L + +M D ++S VI C
Sbjct: 402 DAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACA 461
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
++SLE +Q A G SD V +++L+D Y K G +E R VFD M + + + WN+
Sbjct: 462 SISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNS 521
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
+I+GY +GQG +AI +F++M + P +TF+ VL+AC+Y GL E G ++F SM DH
Sbjct: 522 MISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDH 581
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
P H++CM++LL R G ++EA L+ PF+ +MW ++L C +G +GK A
Sbjct: 582 GFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKA 641
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIE 556
AEK+ E++P YV L I+ +SG + +A V + ++ + P +W +
Sbjct: 642 AEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 149/329 (45%), Gaps = 75/329 (22%)
Query: 136 MISSGFEPDLYMM-NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSE 194
++ GF + ++ N +L M+ + G M AR LF +MP+R+ SW T+I G ++SG+
Sbjct: 52 LLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGE--- 108
Query: 195 AFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALID 254
G S F M+ D + ++
Sbjct: 109 -------------KGTSLRFFDMMPER-----------------------DGYSWNVVVS 132
Query: 255 MYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFT 314
++K G + A+ F+ MPEK V NS++ GY L+GY+EEAL ++ E+ S D T
Sbjct: 133 GFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAIT 189
Query: 315 ISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSK--------------- 359
++ V++ C L +L+ KQ HA ++ G D N++LV+ Y+K
Sbjct: 190 LTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR 249
Query: 360 ----------------WGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQ 403
GR+ ++R +FDR + VI WN++I+GY + +A+ +F +
Sbjct: 250 EPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNE 309
Query: 404 MLRERVIPNHVTFLAVLSACSYSGLSERG 432
M R + T AV++AC G E G
Sbjct: 310 M-RNETREDSRTLAAVINACIGLGFLETG 337
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 332 KQAHAALVRHGFGSDIV-ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGN 390
+Q + L++ GF S IV L+ YS+ G+M AR++FD M +N SWN +I GY N
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 391 HGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 450
G+ +++ F+ M+ ER + ++ V+S + +G +F +M V ++
Sbjct: 106 SGEKGTSLRFFD-MMPER---DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSL 161
Query: 451 HYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM 510
+ ++ G +EA L + F +L AC L+ GK ++ +
Sbjct: 162 LHGYIL-----NGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQI--L 214
Query: 511 DPGKLCNYVM---LLNIYNSSGKLKEAAGVLQTLK 542
G C+ M L+N+Y G L+ A+ +L+ ++
Sbjct: 215 IGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR 249
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/474 (30%), Positives = 267/474 (56%), Gaps = 16/474 (3%)
Query: 89 HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMM 148
H +A+E+F +E+ D T + V C L +R + +I+ GFE + ++
Sbjct: 144 HVKALEVF--VEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFIS 201
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
+ + ++ +DAR++F +MPE DV+ W V+ + Y EA GLF M +
Sbjct: 202 STLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAM----HR 257
Query: 209 GRS-----RTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIE 263
G+ TF T++ A L ++ G++IH + G+G + V +L+DMY KCGS+
Sbjct: 258 GKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVR 317
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
+A+ F+ M +K +V W++++ GY +G E+A+ I+ EM + D + V++ C
Sbjct: 318 EARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACA 373
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
LA++ K+ H VR G +++ +AL+D Y K G ++ A V+ +M +N+I+WNA
Sbjct: 374 GLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNA 433
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
+++ +G+GE+A+ F M+++ + P++++F+A+L+AC ++G+ + G F M++ +
Sbjct: 434 MLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSY 493
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE-LGKF 502
+KP HY+CMI+LLGR GL +EA L+ RA ++W LL C + + + +
Sbjct: 494 GIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAER 553
Query: 503 AAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIE 556
A+++ E++P +YV+L N+Y + G+ +A + + + R+G+ +WI+
Sbjct: 554 IAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 199/391 (50%), Gaps = 14/391 (3%)
Query: 113 YDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGL-MLDARKLFGDM 171
Y +L+ C + S + +++ SG E D + N +L ++ K G M + R++F
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN-DGRSRTFATMVRASAGLGLIQVG 230
+D +SW +++ G V ++ +A +F+ M V F D T ++ V+A + LG +++G
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEM-VSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
R H + G + F++ L +Y DA+ FD+MPE + W ++++ ++ +
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 242
Query: 291 GYSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
EEAL ++ M R G D T V+ C L L+ K+ H L+ +G GS++V
Sbjct: 243 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
++L+D Y K G + +AR VF+ M +KN +SW+AL+ GY +G+ E+AI++F +M + +
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 362
Query: 410 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 469
F VL AC+ G EI R + A +I+L G+ G +D A
Sbjct: 363 ----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESA-LIDLYGKSGCIDSAS 417
Query: 470 ALIRRAPFEPTKNM--WVALLTACRMHGNLE 498
+ + +NM W A+L+A +G E
Sbjct: 418 RVYSKMSI---RNMITWNAMLSALAQNGRGE 445
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/510 (30%), Positives = 282/510 (55%), Gaps = 13/510 (2%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA+ +F + EG ++ ++ +++ C ++ +++ I G+E L + N
Sbjct: 259 EAVVIFRDMMREG--VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNI 316
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ + KCG++ + +F M ER+VVSW T+I S + +A +FL M +
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPN 371
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
TF ++ A I+ G +IH +K G + V + I +Y+K ++EDA+ AF+
Sbjct: 372 EVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE 431
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC-VRLASLE 329
+ + + WN++I+G+A +G+S EAL ++L ++ S++ I S++
Sbjct: 432 DITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVK 491
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
++ HA L++ G S V ++AL+D Y+K G ++++ VF+ M +KN W ++I+ Y
Sbjct: 492 QGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYS 551
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 449
+HG E + +F +M++E V P+ VTFL+VL+AC+ G+ ++G+EIF M + ++P
Sbjct: 552 SHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSH 611
Query: 450 MHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYE 509
HY+CM+++LGR G L EA L+ P P ++M ++L +CR+HGN+++G AE E
Sbjct: 612 EHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAME 671
Query: 510 MDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQP-----HAF 564
M P +YV + NIY + +AA + + +++K + +WI+V F
Sbjct: 672 MKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGF 731
Query: 565 LCGDKSHTQTKEIYQKVDEILDEISRHGYI 594
GDKSH ++ EIY+ V+ I E++ G +
Sbjct: 732 SSGDKSHPKSDEIYRMVEIIGLEMNLEGKV 761
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 159/311 (51%), Gaps = 13/311 (4%)
Query: 117 VNVCVGLRSIRGVKK----VFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
V +C+ L++ RG K + + +SGF + + N V+ M+ K G +A +F ++
Sbjct: 79 VTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLV 138
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQ 232
+ DVVSW T++ G D+ A + M + T++T + G +G Q
Sbjct: 139 DPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 233 IHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG- 291
+ S +K G+ D V + I MYS+ GS A+ FD+M K + WNS+++G + G
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
+ EA+ I+ +M G ++DH + + VI C L+ A+Q H ++ G+ S +
Sbjct: 256 FGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGN 315
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
L+ YSK G +E + VF +M +NV+SW +I+ + A+ +F M + V P
Sbjct: 316 ILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYP 370
Query: 412 NHVTFLAVLSA 422
N VTF+ +++A
Sbjct: 371 NEVTFVGLINA 381
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 4/200 (2%)
Query: 225 GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSII 284
G ++ G QIH + G V+ A++ MY K G ++A C F+ + + V WN+I+
Sbjct: 90 GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTIL 149
Query: 285 AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFG 344
+G+ ++ AL+ + M+ +G D FT S + CV Q + +V+ G
Sbjct: 150 SGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLE 206
Query: 345 SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQ-GEQAIQMFEQ 403
SD+V + + YS+ G AR VFD M K++ISWN+L++G G G +A+ +F
Sbjct: 207 SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRD 266
Query: 404 MLRERVIPNHVTFLAVLSAC 423
M+RE V +HV+F +V++ C
Sbjct: 267 MMREGVELDHVSFTSVITTC 286
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/489 (32%), Positives = 267/489 (54%), Gaps = 52/489 (10%)
Query: 152 LLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDY---SEAFGLFLFMWVEFND 208
L+ H+ L+ +A K+F ++PE DV+S VIG V + S+AF L + + N+
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
TF T++ +S +++G+Q+H ALKMG+ + FV A+++ Y K ++ DA+
Sbjct: 94 F---TFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRC 150
Query: 269 FDQ-------------------------------MPEKTTVGWNSIIAGYALHGYSEEAL 297
FD MPE++ V WN++I G++ G +EEA+
Sbjct: 151 FDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAV 210
Query: 298 SIYLEMRDSGAKI-DHFTISIVIRICVRLASLEHAKQAHAALVRH-GFGSDIVANTALVD 355
+ +++M G I + T I +AS K HA ++ G ++ +L+
Sbjct: 211 NTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLIS 270
Query: 356 FYSKWGRMEDARHVFDRMH--RKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI-PN 412
FYSK G MED+ F+++ ++N++SWN++I GY ++G+GE+A+ MFE+M+++ + PN
Sbjct: 271 FYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPN 330
Query: 413 HVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM---HYACMIELLGREGLLDEAF 469
+VT L VL AC+++GL + G+ F D+ P + HYACM+++L R G EA
Sbjct: 331 NVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAE 389
Query: 470 ALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSG 529
LI+ P +P W ALL C++H N L K AA K+ E+DP + +YVML N Y++
Sbjct: 390 ELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAME 449
Query: 530 KLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEIS 589
+ + + + +K GL+ C+WIEV+ Q F+ DK++ E+Y+ +L +S
Sbjct: 450 NWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYR----MLALVS 505
Query: 590 RHGYIKENE 598
+H ++ENE
Sbjct: 506 QH--LEENE 512
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 174/393 (44%), Gaps = 67/393 (17%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
+RH EA + F+ L G T+ ++ R ++ K++ Y + G +++
Sbjct: 72 SRHVEASQAFKRLLCLG--IRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVF 129
Query: 147 MMNRVLLMHVKCGLMLDARKLFGD-------------------------------MPERD 175
+ + VL +VK + DAR+ F D MPER
Sbjct: 130 VGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERS 189
Query: 176 VVSWMTVIGGLVDSGDYSEAFGLFLFMWVE-FNDGRSRTFATMVRASAGLGLIQVGRQIH 234
VV+W VIGG +G EA F+ M E TF + A + + G+ IH
Sbjct: 190 VVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIH 249
Query: 235 SCALK-MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE--KTTVGWNSIIAGYALHG 291
+CA+K +G + FV +LI YSKCG++ED+ AF+++ E + V WNS+I GYA +G
Sbjct: 250 ACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNG 309
Query: 292 YSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGS----- 345
EEA++++ +M +D+ + ++ TI V+ C HA L++ G+
Sbjct: 310 RGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC-----------NHAGLIQEGYMYFNKAV 358
Query: 346 ---------DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS-WNALIAGYGNHGQGE 395
++ +VD S+ GR ++A + M I W AL+ G H
Sbjct: 359 NDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKR 418
Query: 396 QAIQMFEQMLRERVIPNHVTFLAVLSACSYSGL 428
A ++L + P V+ +LS +YS +
Sbjct: 419 LAKLAASKIL--ELDPRDVSSYVMLSN-AYSAM 448
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 272/522 (52%), Gaps = 11/522 (2%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A LF + L D + T L+ +S++ ++ + I G + + + N
Sbjct: 136 KAFSLFREMRLNEITPD--SVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 151 VLLMHVKCGLMLDARKLFG--DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
+ + KCG + A+ +F D +R VVSW ++ G+ +AFGL+ M E
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
TF + + + GR IHS A+ +G D I MYSK A+
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
FD M +T V W +I+GYA G +EAL+++ M SG K D T+ +I C + SL
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 373
Query: 329 EHAKQAHAALVRHGFGSD-IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAG 387
E K A +G D ++ AL+D YSK G + +AR +FD K V++W +IAG
Sbjct: 374 ETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAG 433
Query: 388 YGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 447
Y +G +A+++F +M+ PNH+TFLAVL AC++SG E+GWE F+ M + + + P
Sbjct: 434 YALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISP 493
Query: 448 RAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
HY+CM++LLGR+G L+EA LIR +P +W ALL AC++H N+++ + AAE L
Sbjct: 494 GLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESL 553
Query: 508 YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCG 567
+ ++P YV + NIY ++G A + +K++ ++ P + I+V + H+F G
Sbjct: 554 FNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVG 613
Query: 568 DKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQ 609
+ H + + IY ++ + + K+ +L DV +E+
Sbjct: 614 EHGHVENEVIYFTLNGL------SLFAKDKHVLYKDVYKEQS 649
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 221/497 (44%), Gaps = 40/497 (8%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
NR+ L E++ + T+ + C L + + V ++I S F D++
Sbjct: 29 NRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVF 88
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+ + M VKC + A K+F MPERD +W ++ G SG +AF LF M +
Sbjct: 89 VGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE 148
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
S T T++++++ +++ +H+ +++GV VA I Y KCG ++ A+
Sbjct: 149 ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAK 208
Query: 267 CAFDQMP--EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
F+ + ++T V WNS+ Y++ G + +A +Y M K D T + C
Sbjct: 209 LVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNAL 384
+L + H+ + G DI A + YSK AR +FD M + +SW +
Sbjct: 269 PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 328
Query: 385 IAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI-----FYSM 439
I+GY G ++A+ +F M++ P+ VT L+++S C G E G I Y
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGC 388
Query: 440 SRDHKVKPRA---MHYAC-----------------------MIELLGREGLLDEAFALIR 473
RD+ + A M+ C MI G+ EA L
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFS 448
Query: 474 RA---PFEPTKNMWVALLTACRMHGNLELG---KFAAEKLYEMDPGKLCNYVMLLNIYNS 527
+ ++P ++A+L AC G+LE G +++Y + PG L +Y ++++
Sbjct: 449 KMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPG-LDHYSCMVDLLGR 507
Query: 528 SGKLKEAAGVLQTLKRK 544
GKL+EA +++ + K
Sbjct: 508 KGKLEEALELIRNMSAK 524
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 185/419 (44%), Gaps = 41/419 (9%)
Query: 165 RKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGL 224
R+L+ V +W I V+ D E+ LF M + + TF + +A A L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 225 GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSII 284
+ +H+ +K D FV A +DM+ KC S++ A F++MPE+ WN+++
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 285 AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFG 344
+G+ G++++A S++ EMR + D T+ +I+ SL+ + HA +R G
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 345 SDIVANTALVDFYSKWGRMEDARHVFDRMHR--KNVISWNALIAGYGNHGQGEQAIQMFE 402
+ + Y K G ++ A+ VF+ + R + V+SWN++ Y G+ A ++
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 403 QMLRERVIPNHVTFLAVLSACSYSGLSERGWEI---------------------FYSMSR 441
MLRE P+ TF+ + ++C +G I YS S
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 442 DH---------KVKPRAMHYACMIELLGREGLLDEAFALIR---RAPFEPTKNMWVALLT 489
D + + MI +G +DEA AL ++ +P ++L++
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 490 ACRMHGNLELGKF--AAEKLY--EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
C G+LE GK+ A +Y + D +CN L+++Y+ G + EA + K
Sbjct: 366 GCGKFGSLETGKWIDARADIYGCKRDNVMICN--ALIDMYSKCGSIHEARDIFDNTPEK 422
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 160/476 (33%), Positives = 259/476 (54%), Gaps = 8/476 (1%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP 143
+C++ R + ++ G D+ T+ + C IR K++ + GF
Sbjct: 82 AVCDKPRVTIFAYKTFVSNGFSPDM--FTFPPVFKACGKFSGIREGKQIHGIVTKMGFYD 139
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
D+Y+ N ++ + CG +A K+FG+MP RDVVSW +I G +G Y EA F M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 204 VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIE 263
VE N T+ ++ +S +G + +G+ IH LK ALIDMY KC +
Sbjct: 200 VEPNLA---TYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLS 256
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR-DSGAKIDHFTISIVIRIC 322
DA F ++ +K V WNS+I+G S+EA+ ++ M+ SG K D ++ V+ C
Sbjct: 257 DAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSAC 316
Query: 323 VRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWN 382
L +++H + H ++ G D TA+VD Y+K G +E A +F+ + KNV +WN
Sbjct: 317 ASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWN 376
Query: 383 ALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM-SR 441
AL+ G HG G ++++ FE+M++ PN VTFLA L+AC ++GL + G F+ M SR
Sbjct: 377 ALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSR 436
Query: 442 DHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNL-ELG 500
++ + P+ HY CMI+LL R GLLDEA L++ P +P + A+L+AC+ G L EL
Sbjct: 437 EYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELP 496
Query: 501 KFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIE 556
K + +++ YV+L NI+ ++ + + A + + +K KG+ +P ++IE
Sbjct: 497 KEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Query: 276 TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAH 335
++ +N++++ YA+ + Y +G D FT V + C + + + KQ H
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 336 AALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGE 395
+ + GF DI +LV FY G +A VF M ++V+SW +I G+ G +
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 396 QAIQMFEQMLRERVIPNHVTFLAVLSACSYSG 427
+A+ F +M E PN T++ VL + G
Sbjct: 190 EALDTFSKMDVE---PNLATYVCVLVSSGRVG 218
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 78 SQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMI 137
S I L C R +EA++LF +++ G ++++ C L ++ + V Y++
Sbjct: 275 SMISGLVHCERSKEAIDLFSLMQTSSGIKPDG-HILTSVLSACASLGAVDHGRWVHEYIL 333
Query: 138 SSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFG 197
++G + D ++ ++ M+ KCG + A ++F + ++V +W ++GGL G E+
Sbjct: 334 TAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLR 393
Query: 198 LFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQ 232
F M TF + A GL+ GR+
Sbjct: 394 YFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 261/491 (53%), Gaps = 5/491 (1%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A+ELF +E G + + + ++ C L + K++ + GFE D Y+ +
Sbjct: 191 KALELFGRMESSG--FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ M+ KC + AR++F MP + +V+W ++I G V GD + M +E
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
T +++ A + + G+ IH ++ V D +V C+LID+Y KCG A+ F
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEH 330
+ + WN +I+ Y G +A+ +Y +M G K D T + V+ C +LA+LE
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 331 AKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGN 390
KQ H ++ +D + +AL+D YSK G ++A +F+ + +K+V+SW +I+ YG+
Sbjct: 429 GKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGS 488
Query: 391 HGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 450
HGQ +A+ F++M + + P+ VT LAVLSAC ++GL + G + F M + ++P
Sbjct: 489 HGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIE 548
Query: 451 HYACMIELLGREGLLDEAFALIRRAPFEPTKN--MWVALLTACRMHGNLELGKFAAEKLY 508
HY+CMI++LGR G L EA+ +I++ P E + N + L +AC +H LG A L
Sbjct: 549 HYSCMIDILGRAGRLLEAYEIIQQTP-ETSDNAELLSTLFSACCLHLEHSLGDRIARLLV 607
Query: 509 EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGD 568
E P Y++L N+Y S A V +K GLR P C+WIE+ + F D
Sbjct: 608 ENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAED 667
Query: 569 KSHTQTKEIYQ 579
+SH + + +Y+
Sbjct: 668 RSHLRAENVYE 678
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 197/382 (51%), Gaps = 8/382 (2%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDS 189
+ + ++ SG+ D+ + + ++ M+ K L ++ ++F +MPERDV SW TVI S
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 190 GDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVA 249
G+ +A LF M + S + + A + L ++ G++IH +K G D +V
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 250 CALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAK 309
AL+DMY KC +E A+ F +MP K+ V WNS+I GY G S+ + I M G +
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 310 IDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHV 369
T++ ++ C R +L H K H ++R +DI N +L+D Y K G A V
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 370 FDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLS 429
F + + SWN +I+ Y + G +A+++++QM+ V P+ VTF +VL ACS
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 430 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLT 489
E+G +I S+S + +++ + + ++++ + G EAF + P + + W +++
Sbjct: 427 EKGKQIHLSIS-ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS-WTVMIS 484
Query: 490 ACRMHGNLELGKFAAEKLYEMD 511
A HG E LY+ D
Sbjct: 485 AYGSHGQ------PREALYQFD 500
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 163/307 (53%), Gaps = 6/307 (1%)
Query: 124 RSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER-DVVSWMTV 182
+S+R +K V +++ G D+ + ++ ++ C AR +F + R DV W ++
Sbjct: 18 KSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSL 77
Query: 183 IGGLVDSG---DYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALK 239
+ G + D E F L + D S TF +++A LG +GR IH+ +K
Sbjct: 78 MSGYSKNSMFHDTLEVFKRLLNCSICVPD--SFTFPNVIKAYGALGREFLGRMIHTLVVK 135
Query: 240 MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSI 299
G D VA +L+ MY+K E++ FD+MPE+ WN++I+ + G +E+AL +
Sbjct: 136 SGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALEL 195
Query: 300 YLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSK 359
+ M SG + + ++++ I C RL LE K+ H V+ GF D N+ALVD Y K
Sbjct: 196 FGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGK 255
Query: 360 WGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAV 419
+E AR VF +M RK++++WN++I GY G + +++ +M+ E P+ T ++
Sbjct: 256 CDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSI 315
Query: 420 LSACSYS 426
L ACS S
Sbjct: 316 LMACSRS 322
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 2/207 (0%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG-WNSIIAGYAL 289
+ +H L +G+ D + +LI++Y C A+ F+ ++ V WNS+++GY+
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 290 HGYSEEALSIYLEMRDSGAKI-DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
+ + L ++ + + + D FT VI+ L + H +V+ G+ D+V
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
++LV Y+K+ E++ VFD M ++V SWN +I+ + G+ E+A+++F +M
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 409 VIPNHVTFLAVLSACSYSGLSERGWEI 435
PN V+ +SACS ERG EI
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEI 230
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 241/432 (55%), Gaps = 1/432 (0%)
Query: 117 VNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDV 176
+ CVGL + + + +G + D Y+ ++ M+ + G M A+K+F ++P R+
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 177 VSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSC 236
V W ++ G + E F LF M + T +V+A + +VG+ +H
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 237 ALKMG-VGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEE 295
+++ + ++ ++IDMY KC +++A+ F+ ++ V W ++I+G+A + E
Sbjct: 236 SIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVE 295
Query: 296 ALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVD 355
A ++ +M + T++ ++ C L SL H K H ++R+G D V T+ +D
Sbjct: 296 AFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFID 355
Query: 356 FYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVT 415
Y++ G ++ AR VFD M +NVISW+++I +G +G E+A+ F +M + V+PN VT
Sbjct: 356 MYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVT 415
Query: 416 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRA 475
F+++LSACS+SG + GW+ F SM+RD+ V P HYACM++LLGR G + EA + I
Sbjct: 416 FVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNM 475
Query: 476 PFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAA 535
P +P + W ALL+ACR+H ++L AEKL M+P K YV+L NIY +G +
Sbjct: 476 PVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVN 535
Query: 536 GVLQTLKRKGLR 547
V + + KG R
Sbjct: 536 CVRRKMGIKGYR 547
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 153/349 (43%), Gaps = 19/349 (5%)
Query: 210 RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
R+R T++ + L Q Q+H+ + G + + +L + Y + ++ A +F
Sbjct: 6 RARALLTILSQAKTLNHTQ---QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSF 62
Query: 270 DQMP--EKTTVGWNSIIAGYALHG---YSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
+++P ++ WN+I++GY+ YS+ L +Y MR +D F + I+ CV
Sbjct: 63 NRIPCWKRNRHSWNTILSGYSKSKTCCYSD-VLLLYNRMRRHCDGVDSFNLVFAIKACVG 121
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNAL 384
L LE+ H +++G D +LV+ Y++ G ME A+ VFD + +N + W L
Sbjct: 122 LGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVL 181
Query: 385 IAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 444
+ GY + + + ++F M + + +T + ++ AC + G + R
Sbjct: 182 MKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF 241
Query: 445 VKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKN----MWVALLTA-CRMHGNLEL 499
+ A +I++ + LLD A R FE + + MW L++ + +E
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNA-----RKLFETSVDRNVVMWTTLISGFAKCERAVEA 296
Query: 500 GKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRM 548
+ L E C +L +S G L+ V + R G+ M
Sbjct: 297 FDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEM 345
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 177/601 (29%), Positives = 291/601 (48%), Gaps = 49/601 (8%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A+++F + L G + A T + V+ C L+ I +V + + GF D+ + N
Sbjct: 335 QALDMFRKMFLAGVVPN--AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS 392
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ M+ KCG + DARK+F + +DV +W ++I G +G +A+ LF M D
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM----QDAN 448
Query: 211 SR----TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
R T+ TM+ G I+ GD A L K G +
Sbjct: 449 LRPNIITWNTMIS-----GYIK--------------NGDEGEAMDLFQRMEKDGKV---- 485
Query: 267 CAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA 326
++ T WN IIAGY +G +EAL ++ +M+ S + TI ++ C L
Sbjct: 486 -------QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLL 538
Query: 327 SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIA 386
+ ++ H ++R + AL D Y+K G +E +R +F M K++I+WN+LI
Sbjct: 539 GAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIG 598
Query: 387 GYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 446
GY HG A+ +F QM + + PN T +++ A G + G ++FYS++ D+ +
Sbjct: 599 GYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHII 658
Query: 447 PRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEK 506
P H + M+ L GR L+EA I+ + +W + LT CR+HG++++ AAE
Sbjct: 659 PALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAEN 718
Query: 507 LYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLC 566
L+ ++P ++ IY KL + + + L+ +WIEV+ H F
Sbjct: 719 LFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTT 778
Query: 567 GDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQQ--YHSEKLAIAFG 624
GD+S T +Y V E + + E+ + EEE R + HSEK A+AFG
Sbjct: 779 GDQSKLCTDVLYPLV-EKMSRLDNRSDQYNGELWI----EEEGREETCGIHSEKFAMAFG 833
Query: 625 LINT--PDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDY 682
LI++ T ++I + R+C DCH+ K ++ G +I++ D HHF+N CSC DY
Sbjct: 834 LISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDY 893
Query: 683 W 683
W
Sbjct: 894 W 894
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 177/408 (43%), Gaps = 36/408 (8%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
NR RE +LF ++ +G D + ++ C + K + + +I G L
Sbjct: 160 NRWREVAKLFRLMMKDGVLPD--DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLR 217
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+ N +L ++ KCG + A K F M ERDV++W +V+ +G + EA L M E
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
T+ ++ LG + G+ D F
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT------------------ 319
Query: 267 CAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA 326
W ++I+G +G +AL ++ +M +G + TI + C L
Sbjct: 320 -------------WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK 366
Query: 327 SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIA 386
+ + H+ V+ GF D++ +LVD YSK G++EDAR VFD + K+V +WN++I
Sbjct: 367 VINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMIT 426
Query: 387 GYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 446
GY G +A ++F +M + PN +T+ ++S +G ++F M +D KV+
Sbjct: 427 GYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQ 486
Query: 447 PRAMHYACMIELLGREGLLDEAFALIRRAPFE---PTKNMWVALLTAC 491
+ +I + G DEA L R+ F P ++LL AC
Sbjct: 487 RNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 207/461 (44%), Gaps = 57/461 (12%)
Query: 106 ADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDAR 165
+ V STY L+ C+ SI + ++ + EPD+++ ++L M+ KCG + DAR
Sbjct: 77 SKVKRSTYLKLLESCIDSGSIH-LGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADAR 135
Query: 166 KLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLG 225
K+F M ER++ +W +IG + E LF M + F +++ A G
Sbjct: 136 KVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCG 195
Query: 226 LIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIA 285
++ G+ IHS +K+G+ V+ +++ +Y+KCG ++ A F +M E+ + WNS++
Sbjct: 196 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLL 255
Query: 286 GYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGS 345
Y +G EEA+ + EM + G
Sbjct: 256 AYCQNGKHEEAVELVKEME-----------------------------------KEGISP 280
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMH----RKNVISWNALIAGYGNHGQGEQAIQMF 401
+V L+ Y++ G+ + A + +M +V +W A+I+G ++G QA+ MF
Sbjct: 281 GLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 402 EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGR 461
+M V+PN VT ++ +SACS + +G E+ +S++ + ++++ +
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAVKMGFIDDVLVGNSLVDMYSK 399
Query: 462 EGLLDEAFALIRRAPFEPTKN----MWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCN 517
G L++A R F+ KN W +++T G GK A E M L
Sbjct: 400 CGKLEDA-----RKVFDSVKNKDVYTWNSMITGYCQAG--YCGK-AYELFTRMQDANLRP 451
Query: 518 YVMLLNI----YNSSGKLKEAAGVLQTLKRKGLRMLPTCTW 554
++ N Y +G EA + Q +++ G T TW
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 40/255 (15%)
Query: 175 DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIH 234
DV +W +I GL+ +G +A +F M++ + T + V A + L +I G ++H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 235 SCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSE 294
S A+KMG D V +L+DMYSKCG +EDA+ FD + K WNS+I GY GY
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 295 EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALV 354
+A ++ M+D+ + +I+ ++
Sbjct: 436 KAYELFTRMQDANLR-----------------------------------PNIITWNTMI 460
Query: 355 DFYSKWGRMEDARHVFDRMHR-----KNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
Y K G +A +F RM + +N +WN +IAGY +G+ ++A+++F +M R
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 410 IPNHVTFLAVLSACS 424
+PN VT L++L AC+
Sbjct: 521 MPNSVTILSLLPACA 535
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 147/442 (33%), Positives = 237/442 (53%), Gaps = 9/442 (2%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ ++ C GLR I+ V +++ +GFE ++Y+ +L M++ CG + ++F D+
Sbjct: 109 TFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI 168
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
P+ +VV+W ++I G V++ +S+A F M ++ A I G+
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK 228
Query: 232 QIHSCALKMG--------VGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSI 283
H +G VG + +A +LIDMY+KCG + A+ FD MPE+T V WNSI
Sbjct: 229 WFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSI 288
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I GY+ +G +EEAL ++L+M D G D T VIR + + + HA + + GF
Sbjct: 289 ITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGF 348
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQ 403
D ALV+ Y+K G E A+ F+ + +K+ I+W +I G +HG G +A+ +F++
Sbjct: 349 VKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQR 408
Query: 404 MLRE-RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 462
M + P+ +T+L VL ACS+ GL E G F M H ++P HY CM+++L R
Sbjct: 409 MQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRA 468
Query: 463 GLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLL 522
G +EA L++ P +P N+W ALL C +H NLEL + E + YV+L
Sbjct: 469 GRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLS 528
Query: 523 NIYNSSGKLKEAAGVLQTLKRK 544
NIY +G+ + + +++K K
Sbjct: 529 NIYAKAGRWADVKLIRESMKSK 550
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 19/282 (6%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCG---SIEDAQCAFDQMPEKTTVGWNSIIAGY 287
Q+H +K V + LID + C ++ A+ F+ + + WNS+I GY
Sbjct: 23 NQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDI 347
+ ++AL Y EM G D+FT V++ C L ++ H +V+ GF ++
Sbjct: 83 SNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNM 142
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE 407
+T L+ Y G + VF+ + + NV++W +LI+G+ N+ + AI+ F +M
Sbjct: 143 YVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 408 RVIPNHVTFLAVLSACS-----------YSGLSERGWEIFYSMSRDHKVKPRAMHYACMI 456
V N + +L AC + L G++ ++ KV + +I
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYF----QSKVGFNVILATSLI 258
Query: 457 ELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE 498
++ + G L A L P E T W +++T +G+ E
Sbjct: 259 DMYAKCGDLRTARYLFDGMP-ERTLVSWNSIITGYSQNGDAE 299
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 243/436 (55%), Gaps = 4/436 (0%)
Query: 125 SIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIG 184
++R K V Y GF DL + +L ++ K ++ AR++F +++ V+W +IG
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 185 GLVDSGDYSEAFGLFLFMWVEFNDGRSRTFAT--MVRASAGLGLIQVGRQIHSCALKMGV 242
G V++ EA +F M V N A ++ A G + GR +H A+K G
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
Query: 243 GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLE 302
D V +I Y+K GS+ DA F ++ K + +NS+I G ++ EE+ ++ E
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
MR SG + D T+ V+ C LA+L H H V HG+ + AL+D Y+K G+
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
++ A+ VFD MH+++++SWN ++ G+G HG G++A+ +F M V P+ VT LA+LSA
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSA 519
Query: 423 CSYSGLSERGWEIFYSMSR-DHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTK 481
CS+SGL + G ++F SMSR D V PR HY CM +LL R G LDEA+ + + PFEP
Sbjct: 520 CSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDI 579
Query: 482 NMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
+ LL+AC + N ELG ++K+ + + V+L N Y+++ + ++AA +
Sbjct: 580 RVLGTLLSACWTYKNAELGNEVSKKMQSLGETTE-SLVLLSNTYSAAERWEDAARIRMIQ 638
Query: 542 KRKGLRMLPTCTWIEV 557
K++GL P +W++V
Sbjct: 639 KKRGLLKTPGYSWVDV 654
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 215/468 (45%), Gaps = 48/468 (10%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY ++ C GLR+I K + +++ S F D+Y+ ++ + KCG + A K+F +M
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGL---GLIQ 228
P+RD+V+W +I G ++ GLFL M DG S +T+V L G ++
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDM--RRIDGLSPNLSTIVGMFPALGRAGALR 222
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
G+ +H +MG D V ++D+Y+K I A+ FD +K V W+++I GY
Sbjct: 223 EGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYV 282
Query: 289 LHGYSEEALSIYLEM--RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
+ +EA ++ +M D+ A + I +++ C R L + H V+ GF D
Sbjct: 283 ENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILD 342
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
+ ++ FY+K+G + DA F + K+VIS+N+LI G + + E++ ++F +M
Sbjct: 343 LTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRT 402
Query: 407 ERVIPNHVTFLAVLSACSY-----SGLSERGW---------------------------- 433
+ P+ T L VL+ACS+ G S G+
Sbjct: 403 SGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDV 462
Query: 434 --EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTAC 491
+F +M + V M + I LG+E L F ++ P + +A+L+AC
Sbjct: 463 AKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEAL--SLFNSMQETGVNPDEVTLLAILSAC 520
Query: 492 RMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQ 539
G ++ GK + M G N + ++ YN L AG L
Sbjct: 521 SHSGLVDEGK---QLFNSMSRGDF-NVIPRIDHYNCMTDLLARAGYLD 564
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 135/256 (52%), Gaps = 5/256 (1%)
Query: 154 MHVKCGLMLDARKLFGDMPERDV--VSWMTVIGGLVDSGDYSE-AFGLFLFMWVEFNDGR 210
++ C + AR +F ++P + ++W +I S D++E A L+ M
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYA-SNDFAEKALDLYYKMLNSGVRPT 102
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
T+ +++A AGL I G+ IHS D +V AL+D Y+KCG +E A FD
Sbjct: 103 KYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFD 162
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRD-SGAKIDHFTISIVIRICVRLASLE 329
+MP++ V WN++I+G++LH + + ++L+MR G + TI + R +L
Sbjct: 163 EMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALR 222
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
K H R GF +D+V T ++D Y+K + AR VFD +KN ++W+A+I GY
Sbjct: 223 EGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYV 282
Query: 390 NHGQGEQAIQMFEQML 405
+ ++A ++F QML
Sbjct: 283 ENEMIKEAGEVFFQML 298
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 113/210 (53%), Gaps = 4/210 (1%)
Query: 227 IQVGRQIHSCALKMGVG-GDSFVACALIDMYSKCGSIEDAQCAFDQMPEK--TTVGWNSI 283
+ +G+ IH LK + S V L +Y+ C +E A+ FD++P + W+ +
Sbjct: 15 LVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLM 74
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I YA + ++E+AL +Y +M +SG + +T V++ C L +++ K H+ + F
Sbjct: 75 IRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDF 134
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQ 403
+D+ TALVDFY+K G +E A VFD M ++++++WNA+I+G+ H I +F
Sbjct: 135 ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLD 194
Query: 404 MLR-ERVIPNHVTFLAVLSACSYSGLSERG 432
M R + + PN T + + A +G G
Sbjct: 195 MRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 140/286 (48%), Gaps = 2/286 (0%)
Query: 90 REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMN 149
+EA E+F + + + A V ++ C + G + V Y + +GF DL + N
Sbjct: 288 KEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQN 347
Query: 150 RVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDG 209
++ + K G + DA + F ++ +DV+S+ ++I G V + E+F LF M
Sbjct: 348 TIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRP 407
Query: 210 RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
T ++ A + L + G H + G ++ + AL+DMY+KCG ++ A+ F
Sbjct: 408 DITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVF 467
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
D M ++ V WN+++ G+ +HG +EALS++ M+++G D T+ ++ C ++
Sbjct: 468 DTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVD 527
Query: 330 HAKQAHAALVRHGFG--SDIVANTALVDFYSKWGRMEDARHVFDRM 373
KQ ++ R F I + D ++ G +++A ++M
Sbjct: 528 EGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 254/501 (50%), Gaps = 31/501 (6%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY L VC LR + +++ E ++ N + M CG M +ARK+F +
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
P RD+VSW +I G G+ +A ++ M E T +V + + LG + G+
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
+ + + G+ + AL+DM+SKCG I +A+ FD + ++T V W ++I+GYA G
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 292 Y-------------------------------SEEALSIYLEMRDSGAKIDHFTISIVIR 320
++AL+++ EM+ S K D T+ +
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
C +L +L+ H + ++ ++ T+LVD Y+K G + +A VF + +N ++
Sbjct: 398 ACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT 457
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 440
+ A+I G HG AI F +M+ + P+ +TF+ +LSAC + G+ + G + F M
Sbjct: 458 YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
Query: 441 RDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELG 500
+ P+ HY+ M++LLGR GLL+EA L+ P E +W ALL CRMHGN+ELG
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELG 577
Query: 501 KFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQ 560
+ AA+KL E+DP YV+L +Y + ++A + + +G+ +P C+ IEV
Sbjct: 578 EKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGI 637
Query: 561 PHAFLCGDKSHTQTKEIYQKV 581
F+ DKS ++++IY ++
Sbjct: 638 VCEFIVRDKSRPESEKIYDRL 658
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 218/489 (44%), Gaps = 81/489 (16%)
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGL----MLD-ARKLFGDMPERDVVSWMTVI 183
+K++ MI +G D + +R++ C L LD + K+ + ++ SW I
Sbjct: 69 LKQIQAQMIINGLILDPFASSRLIAF---CALSESRYLDYSVKILKGIENPNIFSWNVTI 125
Query: 184 GGLVDSGDYSEAFGLFLFMWVEFNDGRSR----TFATMVRASAGLGLIQVGRQIHSCALK 239
G +S + E+F L+ M + SR T+ + + A L L +G I LK
Sbjct: 126 RGFSESENPKESFLLYKQM-LRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLK 184
Query: 240 MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSI 299
+ + S V A I M++ CG +E+A+ FD+ P + V WN +I GY G +E+A+ +
Sbjct: 185 LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYV 244
Query: 300 YLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSK 359
Y M G K D T+ ++ C L L K+ + + +G I AL+D +SK
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSK 304
Query: 360 WGRMEDARHVFDRMHRKNVISWNALIAGYGNHG--------------------------- 392
G + +AR +FD + ++ ++SW +I+GY G
Sbjct: 305 CGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGS 364
Query: 393 ----QGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF-----YSMSRD- 442
+G+ A+ +F++M P+ +T + LSACS G + G I YS+S +
Sbjct: 365 VQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 443 -----------------------HKVKPR-AMHYACMIELLGREGLLDEAFALIRR---A 475
H ++ R ++ Y +I L G A + A
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA 484
Query: 476 PFEPTKNMWVALLTACRMHGNLELGK--FAAEK-LYEMDPGKLCNYVMLLNIYNSSGKLK 532
P + ++ LL+AC G ++ G+ F+ K + ++P +L +Y +++++ +G L+
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNP-QLKHYSIMVDLLGRAGLLE 543
Query: 533 EAAGVLQTL 541
EA +++++
Sbjct: 544 EADRLMESM 552
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 155/348 (44%), Gaps = 35/348 (10%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A+ +++++E EG D T LV+ C L + K+ + Y+ +G + ++N
Sbjct: 240 KAIYVYKLMESEGVKPD--DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNA 297
Query: 151 VLLM-------------------------------HVKCGLMLDARKLFGDMPERDVVSW 179
++ M + +CGL+ +RKLF DM E+DVV W
Sbjct: 298 LMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLW 357
Query: 180 MTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALK 239
+IGG V + +A LF M T + A + LG + VG IH K
Sbjct: 358 NAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK 417
Query: 240 MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSI 299
+ + + +L+DMY+KCG+I +A F + + ++ + +II G ALHG + A+S
Sbjct: 418 YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISY 477
Query: 300 YLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAAL-VRHGFGSDIVANTALVDFYS 358
+ EM D+G D T ++ C ++ + + + R + + +VD
Sbjct: 478 FNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLG 537
Query: 359 KWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
+ G +E+A + + M + W AL+ G HG E + +++L
Sbjct: 538 RAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLL 585
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 264/481 (54%), Gaps = 5/481 (1%)
Query: 97 EILEL----EGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVL 152
EIL+L GD T+ A ++V + + + + ++ +GF+ D+++ ++
Sbjct: 228 EILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALI 287
Query: 153 LMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR 212
M++KCG + ++ +P +DVV W +I GL+ G +A +F M +D S
Sbjct: 288 TMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSE 347
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
A++V + A LG +G +H L+ G D+ +LI MY+KCG ++ + F++M
Sbjct: 348 AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
Query: 273 PEKTTVGWNSIIAGYALHGYSEEALSIYLEMR-DSGAKIDHFTISIVIRICVRLASLEHA 331
E+ V WN+II+GYA + +AL ++ EM+ + ++D FT+ +++ C +L
Sbjct: 408 NERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG 467
Query: 332 KQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNH 391
K H ++R + +TALVD YSK G +E A+ FD + K+V+SW LIAGYG H
Sbjct: 468 KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFH 527
Query: 392 GQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMH 451
G+G+ A++++ + L + PNHV FLAVLS+CS++G+ ++G +IF SM RD V+P H
Sbjct: 528 GKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEH 587
Query: 452 YACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMD 511
AC+++LL R +++AF + P+ ++ +L ACR +G E+ E + E+
Sbjct: 588 LACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELK 647
Query: 512 PGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSH 571
PG +YV L + + + + + + ++ GL+ LP + IE+ + F SH
Sbjct: 648 PGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Query: 572 T 572
+
Sbjct: 708 S 708
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 194/404 (48%), Gaps = 8/404 (1%)
Query: 72 STPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKK 131
ST S I L H++ + F + D T+ +L+ C L+ +
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPD--TFTFPSLLKACASLQRLSFGLS 67
Query: 132 VFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGD 191
+ ++ +GF D Y+ + ++ ++ K GL+ ARK+F +M ERDVV W +IG +G
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 192 YSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACA 251
EA L M + G T++ +G+ I + +H A+ G D V +
Sbjct: 128 VGEACSLVNEMRFQ---GIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNS 184
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKID 311
++++Y KC + DA+ FDQM ++ V WN++I+GYA G E L + MR G + D
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 312 HFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
T + + + LE + H +V+ GF D+ TAL+ Y K G+ E + V +
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 431
+ K+V+ W +I+G G+ E+A+ +F +ML+ + +V+++C+ G +
Sbjct: 305 TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 432 GWEIF-YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
G + Y + + + A++ +I + + G LD++ + R
Sbjct: 365 GASVHGYVLRHGYTLDTPALN--SLITMYAKCGHLDKSLVIFER 406
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 143/300 (47%), Gaps = 6/300 (2%)
Query: 71 PSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVK 130
P+ +C + GL R L E+ +D+ + ++V C L S
Sbjct: 307 PNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGA 366
Query: 131 KVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSG 190
V Y++ G+ D +N ++ M+ KCG + + +F M ERD+VSW +I G +
Sbjct: 367 SVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNV 426
Query: 191 DYSEAFGLFLFMWVEFNDGR---SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSF 247
D +A L LF ++F + S T ++++A + G + VG+ IH ++ + S
Sbjct: 427 DLCKA--LLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSL 484
Query: 248 VACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSG 307
V AL+DMYSKCG +E AQ FD + K V W +IAGY HG + AL IY E SG
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 308 AKIDHFTISIVIRICVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDA 366
+ +H V+ C ++ + +++VR G + +VD + R+EDA
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDA 604
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/510 (30%), Positives = 274/510 (53%), Gaps = 21/510 (4%)
Query: 108 VGASTYDALVNVCVGLRSIRGVKKVFNYMISSGF-EPDLYMMNRVLLMHVKCGLMLDARK 166
+ AS AL V +G + F+ +S F E + ++N +++M+ +CG + +
Sbjct: 323 LAASAVSALQQVELG--------RQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFG 374
Query: 167 LFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL 226
+F M ERDVVSW T+I V +G E L M + T ++ A++ L
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 227 IQVGRQIHSCALKMGV---GGDSFVACALIDMYSKCGSIEDAQCAFDQ--MPEKTTVGWN 281
++G+Q H+ ++ G+ G +S+ LIDMYSK G I +Q F+ E+ WN
Sbjct: 435 KEIGKQTHAFLIRQGIQFEGMNSY----LIDMYSKSGLIRISQKLFEGSGYAERDQATWN 490
Query: 282 SIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH 341
S+I+GY +G++E+ ++ +M + + + T++ ++ C ++ S++ KQ H +R
Sbjct: 491 SMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ 550
Query: 342 GFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMF 401
++ +ALVD YSK G ++ A +F + +N +++ +I GYG HG GE+AI +F
Sbjct: 551 YLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLF 610
Query: 402 EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGR 461
M + P+ +TF+AVLSACSYSGL + G +IF M + ++P + HY C+ ++LGR
Sbjct: 611 LSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGR 670
Query: 462 EGLLDEAFALIRRAPFEPT-KNMWVALLTACRMHGNLELGKFAAEKLYEMDPGK-LCNY- 518
G ++EA+ ++ E +W +LL +C++HG LEL + +E+L + D GK Y
Sbjct: 671 VGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYE 730
Query: 519 VMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIY 578
V+L N+Y K K V + ++ KGL+ + IE+ + F+ D+ H + EIY
Sbjct: 731 VLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIY 790
Query: 579 QKVDEILDEISRHGYIKENEMLLPDVDEEE 608
+D + ++ ++ + P ++ +E
Sbjct: 791 DVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 207/457 (45%), Gaps = 18/457 (3%)
Query: 68 IMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIR 127
I KP+T + I N EA+ + ++ + A TY + + C ++++
Sbjct: 65 IPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLK 124
Query: 128 GVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD------ARKLFGDMPERDVVSWMT 181
K V ++I + N ++ M+V C D RK+F +M ++VV+W T
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNT 184
Query: 182 VIGGLVDSGDYSEA---FGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCAL 238
+I V +G +EA FG+ + M V+ +F + A + I+ + L
Sbjct: 185 LISWYVKTGRNAEACRQFGIMMRMEVK---PSPVSFVNVFPAVSISRSIKKANVFYGLML 241
Query: 239 KMG--VGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEA 296
K+G D FV + I MY++ G IE ++ FD E+ WN++I Y + E+
Sbjct: 242 KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVES 301
Query: 297 LSIYLEMRDSGAKI-DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVD 355
+ ++LE S + D T + L +E +Q H + ++ IV +L+
Sbjct: 302 IELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV 361
Query: 356 FYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVT 415
YS+ G + + VF M ++V+SWN +I+ + +G ++ + + +M ++ +++T
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 416 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRA 475
A+LSA S E G + + R ++ M+ + +I++ + GL+ + L +
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIR-QGIQFEGMN-SYLIDMYSKSGLIRISQKLFEGS 479
Query: 476 PF-EPTKNMWVALLTACRMHGNLELGKFAAEKLYEMD 511
+ E + W ++++ +G+ E K+ E +
Sbjct: 480 GYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQN 516
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 9/188 (4%)
Query: 260 GSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSG--AKIDHFTISI 317
G+ + A+ FD +P+ TTV WN+II G+ + EAL Y M+ + D +T S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMED------ARHVFD 371
++ C +L+ K H L+R S V + +L++ Y D R VFD
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 431
M RKNV++WN LI+ Y G+ +A + F M+R V P+ V+F+ V A S S S +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS-RSIK 231
Query: 432 GWEIFYSM 439
+FY +
Sbjct: 232 KANVFYGL 239
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 234/439 (53%), Gaps = 7/439 (1%)
Query: 154 MHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRT 213
M+ +CG + AR++F + D SW +I GL ++G EA +F M + +
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373
Query: 214 FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP 273
+++ A + G QIHS +K G D V +L+ MY+ C D C F+
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS---DLYCCFNLFE 430
Query: 274 E----KTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
+ +V WN+I+ H E L ++ M S + DH T+ ++R CV ++SL+
Sbjct: 431 DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLK 490
Query: 330 HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYG 389
Q H ++ G + L+D Y+K G + AR +FD M ++V+SW+ LI GY
Sbjct: 491 LGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYA 550
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 449
G GE+A+ +F++M + PNHVTF+ VL+ACS+ GL E G +++ +M +H + P
Sbjct: 551 QSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTK 610
Query: 450 MHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYE 509
H +C+++LL R G L+EA I EP +W LL+AC+ GN+ L + AAE + +
Sbjct: 611 EHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILK 670
Query: 510 MDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDK 569
+DP +V+L +++ SSG + AA + ++K+ ++ +P +WIE++ + H F D
Sbjct: 671 IDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDI 730
Query: 570 SHTQTKEIYQKVDEILDEI 588
H + +IY + I ++
Sbjct: 731 FHPERDDIYTVLHNIWSQM 749
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 182/345 (52%), Gaps = 2/345 (0%)
Query: 79 QIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMIS 138
I L N +REA+E F+ + + + TY +L+ C RS+ +K+ +++++
Sbjct: 37 HINSLCKSNFYREALEAFDFAQ-KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILN 95
Query: 139 SGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGL 198
S + D + N +L M+ KCG + DAR++F MPER++VS+ +VI G +G +EA L
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 199 FLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSK 258
+L M E F ++++A A + +G+Q+H+ +K+ ALI MY +
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR 215
Query: 259 CGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA-KIDHFTISI 317
+ DA F +P K + W+SIIAG++ G+ EALS EM G + +
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKN 377
++ C L ++ Q H ++ + +A +L D Y++ G + AR VFD++ R +
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPD 335
Query: 378 VISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
SWN +IAG N+G ++A+ +F QM IP+ ++ ++L A
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 218/483 (45%), Gaps = 69/483 (14%)
Query: 113 YDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
+ +++ C + K++ +I L N ++ M+V+ M DA ++F +P
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 173 ERDVVSWMTVIGGLVDSGDYSEA---------FGLFLFMWVEFNDGRSRTFATMVRASAG 223
+D++SW ++I G G EA FG+F F + ++A +
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF--------HPNEYIFGSSLKACSS 282
Query: 224 LGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSI 283
L G QIH +K + G++ C+L DMY++CG + A+ FDQ+ T WN I
Sbjct: 283 LLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVI 342
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
IAG A +GY++EA+S++ +MR SG D ++ ++ + +L Q H+ +++ GF
Sbjct: 343 IAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF 402
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVF-DRMHRKNVISWNALIAGYGNHGQGEQAIQMFE 402
+D+ +L+ Y+ + ++F D + + +SWN ++ H Q + +++F+
Sbjct: 403 LADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFK 462
Query: 403 QMLRERVIPNHVTFLAVLSAC-------------SYS---GLSERGW------------- 433
ML P+H+T +L C YS GL+ +
Sbjct: 463 LMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCG 522
Query: 434 ------EIFYSM-SRDHKVKPRAMHYACMIELLGREGLLDEAFAL---IRRAPFEPTKNM 483
IF SM +RD + ++ +I + G +EA L ++ A EP
Sbjct: 523 SLGQARRIFDSMDNRD------VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVT 576
Query: 484 WVALLTACRMHGNLELG-KFAAEKLYE--MDPGK-LCNYVMLLNIYNSSGKLKEAAGVLQ 539
+V +LTAC G +E G K A E + P K C+ V +++ +G+L EA +
Sbjct: 577 FVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV--VDLLARAGRLNEAERFID 634
Query: 540 TLK 542
+K
Sbjct: 635 EMK 637
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 154/320 (48%), Gaps = 14/320 (4%)
Query: 183 IGGLVDSGDYSEAFGLFLFMWVEFNDG---RSRTFATMVRASAGLGLIQVGRQIHSCALK 239
I L S Y EA F F + N R RT+ +++ A + + GR+IH L
Sbjct: 38 INSLCKSNFYREALEAFDF--AQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILN 95
Query: 240 MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSI 299
D+ + ++ MY KCGS+ DA+ FD MPE+ V + S+I GY+ +G EA+ +
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 300 YLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSK 359
YL+M D F +I+ C + + KQ HA +++ S ++A AL+ Y +
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR 215
Query: 360 WGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI-PNHVTFLA 418
+ +M DA VF + K++ISW+++IAG+ G +A+ ++ML V PN F +
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 419 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRRA 475
L ACS + G +I + + ++ A+ + ++ R G L+ A F I R
Sbjct: 276 SLKACSSLLRPDYGSQI-HGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIER- 333
Query: 476 PFEPTKNMWVALLTACRMHG 495
P W ++ +G
Sbjct: 334 ---PDTASWNVIIAGLANNG 350
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 19/294 (6%)
Query: 83 LGLCNRHREAMELFEI--LELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSG 140
L C +H + +E+ + L L +C + T L+ CV + S++ +V Y + +G
Sbjct: 445 LTACLQHEQPVEMLRLFKLMLVSEC-EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTG 503
Query: 141 FEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFL 200
P+ ++ N ++ M+ KCG + AR++F M RDVVSW T+I G SG EA LF
Sbjct: 504 LAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFK 563
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSC-ALKMGVGGDSFVACALIDMYSKC 259
M + TF ++ A + +GL++ G ++++ + G+ ++D+ ++
Sbjct: 564 EMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARA 623
Query: 260 GSIEDAQCAFDQMP-EKTTVGWNSIIAGYALHGYSEEALSIYLEMR--DSGAKIDHFTIS 316
G + +A+ D+M E V W ++++ G +++L + ++ KID F +
Sbjct: 624 GRLNEAERFIDEMKLEPDVVVWKTLLSACKTQG------NVHLAQKAAENILKIDPFNST 677
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
+ +C AS +AAL+R V W +ED H+F
Sbjct: 678 AHVLLCSMHAS--SGNWENAALLRSSMKKHDVKKIP----GQSWIEIEDKIHIF 725
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 262 bits (669), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 232/421 (55%), Gaps = 2/421 (0%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
M SGF+P+ VL + G + R++F +P+ V +W ++ G + Y EA
Sbjct: 341 MRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 400
Query: 196 FGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDM 255
F M + T + ++ + A L ++ G+QIH ++ + +S + LI +
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV 460
Query: 256 YSKCGSIEDAQCAFDQ-MPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFT 314
YS+C +E ++C FD + E WNS+I+G+ + +AL ++ M + + T
Sbjct: 461 YSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 315 -ISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM 373
+ V+ C RL SL H +Q H +V+ G+ SD TAL D Y K G ++ AR FD +
Sbjct: 521 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV 580
Query: 374 HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 433
RKN + WN +I GYG++G+G++A+ ++ +M+ P+ +TF++VL+ACS+SGL E G
Sbjct: 581 LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGL 640
Query: 434 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRM 493
EI SM R H ++P HY C+++ LGR G L++A L P++ + +W LL++CR+
Sbjct: 641 EILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRV 700
Query: 494 HGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCT 553
HG++ L + AEKL +DP YV+L N Y+S + ++A + + + + P +
Sbjct: 701 HGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Query: 554 W 554
W
Sbjct: 761 W 761
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 185/385 (48%), Gaps = 22/385 (5%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDS 189
+KVF+ M D+Y N L K G + +A ++F MPERDVVSW +I LV
Sbjct: 61 RKVFDEMSVR----DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRK 116
Query: 190 GDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVA 249
G +A ++ M + T A+++ A + + G + H A+K G+ + FV
Sbjct: 117 GFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVG 176
Query: 250 CALIDMYSKCGSIEDAQC-AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
AL+ MY+KCG I D F+ + + V + ++I G A EA+ ++ M + G
Sbjct: 177 NALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGV 236
Query: 309 KIDHFTISIVIRI------CVRLASL---EHAKQAHAALVRHGFGSDIVANTALVDFYSK 359
++D +S ++ I C L+ + E KQ H +R GFG D+ N +L++ Y+K
Sbjct: 237 QVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAK 296
Query: 360 WGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAV 419
M A +F M NV+SWN +I G+G + +++++ +M PN VT ++V
Sbjct: 297 NKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISV 356
Query: 420 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE- 478
L AC SG E G IF S+ +P + M+ +EA + R+ F+
Sbjct: 357 LGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQN 411
Query: 479 --PTKNMWVALLTACRMHGNLELGK 501
P K +L++C LE GK
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGK 436
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG-------- 260
G ++ A+++R G+ IH ++MG+ D+++ L+D+Y +CG
Sbjct: 4 GGNKYLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKV 63
Query: 261 ----SIEDA---------QC----------AFDQMPEKTTVGWNSIIAGYALHGYSEEAL 297
S+ D +C FD MPE+ V WN++I+ G+ E+AL
Sbjct: 64 FDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKAL 123
Query: 298 SIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFY 357
+Y M G FT++ V+ C ++ + H V+ G +I AL+ Y
Sbjct: 124 VVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMY 183
Query: 358 SKWGRMED-ARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTF 416
+K G + D VF+ + + N +S+ A+I G + +A+QMF M + V + V
Sbjct: 184 AKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCL 243
Query: 417 LAVLS 421
+LS
Sbjct: 244 SNILS 248
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 111 STYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
+++ +++ C L S+ ++ ++ SG+ D ++ + M+ KCG + AR+ F
Sbjct: 520 TSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDA 579
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVG 230
+ ++ V W +I G +G EA GL+ M TF +++ A + GL++ G
Sbjct: 580 VLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETG 639
Query: 231 RQIHSCALKM-GVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK-TTVGWNSIIAGYA 288
+I S ++ G+ + ++D + G +EDA+ + P K ++V W +++
Sbjct: 640 LEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCR 699
Query: 289 LHG 291
+HG
Sbjct: 700 VHG 702
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 230/421 (54%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDS 189
K+V Y + SG DL + + + ++ KCG + ++ KLF +P +D W ++I G +
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 190 GDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVA 249
G EA GLF M + T A ++ + + G++IH L+ G+ +
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 250 CALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAK 309
AL++MYSKCGS++ A+ +D++PE V +S+I+GY+ HG ++ ++ +M SG
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 310 IDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHV 369
+D F IS +++ Q HA + + G ++ ++L+ YSK+G ++D
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709
Query: 370 FDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLS 429
F +++ ++I+W ALIA Y HG+ +A+Q++ M + P+ VTF+ VLSACS+ GL
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLV 769
Query: 430 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLT 489
E + SM +D+ ++P HY CM++ LGR G L EA + I +P +W LL
Sbjct: 770 EESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLA 829
Query: 490 ACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRML 549
AC++HG +ELGK AA+K E++P Y+ L NI G+ E + +K G++
Sbjct: 830 ACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889
Query: 550 P 550
P
Sbjct: 890 P 890
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 129/518 (24%), Positives = 235/518 (45%), Gaps = 47/518 (9%)
Query: 66 AQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRS 125
++I PS + N A+E+F+ E+ ++ T ++++ C
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFK--EMRHSGVEINNCTVTSVISACGRPSM 366
Query: 126 IRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPE---RDVVSWMTV 182
+ +V ++ SGF D + ++ M+ K G + + ++F D+ + +++V+ M
Sbjct: 367 VCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVM-- 424
Query: 183 IGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGV 242
I S +A LF M E R+ F+ S L + +G+Q+H LK G+
Sbjct: 425 ITSFSQSKKPGKAIRLFTRMLQE--GLRTDEFSVCSLLSV-LDCLNLGKQVHGYTLKSGL 481
Query: 243 GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLE 302
D V +L +YSKCGS+E++ F +P K W S+I+G+ +GY EA+ ++ E
Sbjct: 482 VLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSE 541
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
M D G D T++ V+ +C SL K+ H +R G + +ALV+ YSK G
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGS 601
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
++ AR V+DR+ + +S ++LI+GY HG + +F M+ + ++L A
Sbjct: 602 LKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Query: 423 CSYSGLSERGWEIFYSMSR-----------------------DHKVK-------PRAMHY 452
+ S S G ++ +++ D K P + +
Sbjct: 662 AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAW 721
Query: 453 ACMIELLGREGLLDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLELGKF---AAEK 506
+I + G +EA + L++ F+P K +V +L+AC G +E F + K
Sbjct: 722 TALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVK 781
Query: 507 LYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
Y ++P +YV +++ SG+L+EA + + K
Sbjct: 782 DYGIEPENR-HYVCMVDALGRSGRLREAESFINNMHIK 818
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 175/340 (51%), Gaps = 15/340 (4%)
Query: 163 DARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASA 222
DA K+F D +V W T+I G + + +Y F LF M V F S T+++++ A A
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 223 GLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNS 282
L ++ G+ + + +K G D FV A++D+Y+KCG + +A F ++P + V W
Sbjct: 263 SLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 283 IIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
+++GY + AL I+ EMR SG +I++ T++ VI C R + + A Q HA + + G
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHVF---DRMHRKNVISWNALIAGYGNHGQGEQAIQ 399
F D AL+ YSK G ++ + VF D + R+N++ N +I + + +AI+
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIR 439
Query: 400 MFEQMLRERVIPNHVTFLAVLSA--CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIE 457
+F +ML+E + + + ++LS C G G+ + + D V + +
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVG------SSLFT 493
Query: 458 LLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNL 497
L + G L+E++ L + PF+ W ++++ +G L
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYGYL 532
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 183/432 (42%), Gaps = 50/432 (11%)
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
D+++ +L + G M DA KLF +P+ DVVS +I G + E+ F M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 204 VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIE 263
+ ++ +++ A + L + +KMG V ALID++SK E
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
DA F WN+IIAG + ++ EM K D +T S V+ C
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
L L K A +++ G D+ TA+VD Y+K G M +A VF R+ +V+SW
Sbjct: 263 SLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
+++GY A+++F++M V N+ T +V+SAC
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC-------------------- 361
Query: 444 KVKPRAMHYACMIELLGREGLLDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLELG 500
GR ++ EA A + ++ F ++ AL++ G+++L
Sbjct: 362 ----------------GRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLS 405
Query: 501 KFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR--------MLPTC 552
+ E L ++ + N +++ ++ S K +A + + ++GLR +L
Sbjct: 406 EQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL 463
Query: 553 TWIEVKKQPHAF 564
+ + KQ H +
Sbjct: 464 DCLNLGKQVHGY 475
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/582 (28%), Positives = 283/582 (48%), Gaps = 74/582 (12%)
Query: 76 LCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNY 135
+ + +LGL H+EA+ LF L D ++ A+++ C L +++ +K+ +
Sbjct: 41 MLTSYSRLGL---HQEAIALFTQLRFSDAKPD--DYSFTAILSTCASLGNVKFGRKIQSL 95
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM--PERDVVSWMTVIGGLVDSGDYS 193
+I SGF L + N ++ M+ KC L A K+F DM R+ V+W +++ +++ +
Sbjct: 96 VIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFE 155
Query: 194 EAFGLFL-------FMWVEFNDGRSR------------------------TFATMVRA-S 221
A +F+ F W G + TF++++ A S
Sbjct: 156 AALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
Query: 222 AGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ--------------- 266
A + GR +H+ LK G +++ Y+K GS +DA
Sbjct: 216 ADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWN 275
Query: 267 -----C-----------AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI 310
C F PEK V W ++I GY +G E+AL ++EM SG
Sbjct: 276 SIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDS 335
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
DHF V+ C LA L H K H L+ GF ALV+ Y+K G +++A F
Sbjct: 336 DHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAF 395
Query: 371 DRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 430
+ K+++SWN ++ +G HG +QA+++++ M+ + P++VTF+ +L+ CS+SGL E
Sbjct: 396 GDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVE 455
Query: 431 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA--FALIRRAPFEPTKN--MWVA 486
G IF SM +D+++ H CMI++ GR G L EA A + + N W
Sbjct: 456 EGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWET 515
Query: 487 LLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
LL AC H + ELG+ ++ L +P + ++V+L N+Y S+G+ KE V + + +G+
Sbjct: 516 LLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGM 575
Query: 547 RMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEI 588
+ P C+WIEV Q F+ GD SH + +E+ + ++ + E+
Sbjct: 576 KKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEM 617
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 203/486 (41%), Gaps = 104/486 (21%)
Query: 157 KCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR--SRTF 214
K G + AR++F MPE D V+W T++ G + EA LF + F+D + +F
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIA--LFTQLRFSDAKPDDYSF 73
Query: 215 ATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG-------------- 260
++ A LG ++ GR+I S ++ G V +LIDMY KC
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 261 -------------------SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYL 301
E A F +MP++ WN +I+G+A G E LS++
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 302 EMRDSGAKIDHFTISIVIRICVRLAS-LEHAKQAHAALVRHGFGSDIVANTALVDFYSKW 360
EM +S K D +T S ++ C +S + + + HA ++++G+ S + A +++ FY+K
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 361 GRMEDAR-------------------------------HVFDRMHRKNVISWNALIAGYG 389
G +DA VF KN+++W +I GYG
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI-------------- 435
+G GEQA++ F +M++ V +H + AVL ACS L G I
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 436 -------FYSMSRDHKVKPRA---------MHYACMIELLGREGLLDEAFALIRR---AP 476
Y+ D K RA + + M+ G GL D+A L +
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASG 433
Query: 477 FEPTKNMWVALLTACRMHGNLELGKFAAEKLYE--MDPGKLCNYVMLLNIYNSSGKLKEA 534
+P ++ LLT C G +E G E + + P ++ + +++++ G L EA
Sbjct: 434 IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEA 493
Query: 535 AGVLQT 540
+ T
Sbjct: 494 KDLATT 499
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 33/205 (16%)
Query: 253 IDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDH 312
I +K G I A+ FD MPE TV WN+++ Y+ G +EA++++ ++R S AK D
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSK------------- 359
++ + ++ C L +++ ++ + ++R GF + + N +L+D Y K
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 360 ----------W----------GRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQ 399
W + E A VF M ++ +WN +I+G+ + G+ E +
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 400 MFEQMLRERVIPNHVTFLAVLSACS 424
+F++ML P+ TF ++++ACS
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACS 215
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 345 SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
S +V T+ + +K GR+ AR VFD M + ++WN ++ Y G ++AI +F Q+
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 405 LRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
P+ +F A+LS C+ G + G +I
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKI 92
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 240/459 (52%), Gaps = 6/459 (1%)
Query: 135 YMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDY-- 192
Y G E D+ + +L M+ K G + +A KLF MP ++VV++ +I G + +
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 193 ---SEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVA 249
SEAF LF+ M + TF+ +++A + ++ GRQIH+ K D F+
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG 396
Query: 250 CALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAK 309
ALI++Y+ GS ED F ++ W S+I + + E A ++ ++ S +
Sbjct: 397 SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 310 IDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHV 369
+ +T+S+++ C A+L +Q ++ G + T+ + Y+K G M A V
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 370 FDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLS 429
F + +V +++A+I+ HG +A+ +FE M + PN FL VL AC + GL
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 430 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLT 489
+G + F M D+++ P H+ C+++LLGR G L +A LI + F+ W ALL+
Sbjct: 577 TQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
Query: 490 ACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRML 549
+CR++ + +GK AE+L E++P +YV+L NIYN SG A V + ++ +G++
Sbjct: 637 SCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKE 696
Query: 550 PTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEI 588
P +WI + Q H+F D SH ++ IY + E +D +
Sbjct: 697 PALSWIVIGNQTHSFAVADLSHPSSQMIYTML-ETMDNV 734
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 150/297 (50%), Gaps = 22/297 (7%)
Query: 154 MHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRT 213
M+ KC + AR+LF MPER+++S+ ++I G G Y +A LFL + R
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFL-------EAREAN 143
Query: 214 FATMVRASAG-LGL------IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
AG LG + +G +H + G+ F+ LIDMYSKCG ++ A
Sbjct: 144 LKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAM 203
Query: 267 CAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC---V 323
FD+ E+ V WNS+I+GY G +EE L++ +M G + + + V++ C +
Sbjct: 204 SLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINL 263
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
+E H + G DIV TAL+D Y+K G +++A +F M KNV+++NA
Sbjct: 264 NEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNA 323
Query: 384 LIAGYGNHGQ-----GEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
+I+G+ + +A ++F M R + P+ TF VL ACS + E G +I
Sbjct: 324 MISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 140/281 (49%), Gaps = 17/281 (6%)
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
S + + + +A G + +G+ H +K + ++ L++MY KC + A+ FD
Sbjct: 47 SEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFD 106
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEH 330
+MPE+ + +NS+I+GY G+ E+A+ ++LE R++ K+D FT + + C L+
Sbjct: 107 RMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDL 166
Query: 331 AKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGN 390
+ H +V +G + L+D YSK G+++ A +FDR ++ +SWN+LI+GY
Sbjct: 167 GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 391 HGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYS---GLSERGWEIF-----YSMSRD 442
G E+ + + +M R+ + +VL AC + G E+G I M D
Sbjct: 227 VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD 286
Query: 443 HKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNM 483
V+ ++++ + G L EA L P+KN+
Sbjct: 287 IVVR------TALLDMYAKNGSLKEAIKLF---SLMPSKNV 318
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 136/309 (44%), Gaps = 26/309 (8%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA +LF ++ G + ST+ ++ C +++ +++ + + F+ D ++ +
Sbjct: 341 EAFKLFMDMQRRG--LEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 398
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ ++ G D + F ++D+ SW ++I V + AF LF ++
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPE 458
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
T + M+ A A + G QI A+K G+ + V + I MY+K G++ A F
Sbjct: 459 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEH 330
++ ++++I+ A HG + EAL+I+ M+ G K + V+ C
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC-------- 570
Query: 331 AKQAHAALVRHGF------GSDIVAN------TALVDFYSKWGRMEDARH-VFDRMHRKN 377
H LV G +D N T LVD + GR+ DA + + + +
Sbjct: 571 ---CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDH 627
Query: 378 VISWNALIA 386
++W AL++
Sbjct: 628 PVTWRALLS 636
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
I+ + + S+ K AH +++ + L++ Y K + AR +FDRM +
Sbjct: 52 ILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPER 111
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 436
N+IS+N+LI+GY G EQA+++F + + + T+ L C + G E+
Sbjct: 112 NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELL 170
Query: 437 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTA 490
+ + + + + +I++ + G LD+A +L R E + W +L++
Sbjct: 171 HGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISG 223
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 259 bits (663), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 156/517 (30%), Positives = 263/517 (50%), Gaps = 48/517 (9%)
Query: 125 SIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD-ARKLFGDMPERDVVSWMTVI 183
++R +K++ +I +G D +RVL ++ A +F + ++ W T+I
Sbjct: 37 TMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTII 96
Query: 184 GGLVDSGDYSEAFGLFLFMWVEFNDGRSR--TFATMVRASAGLGLIQVGRQIHSCALKMG 241
G S A +F+ M + + T+ ++ +A LG + GRQ+H +K G
Sbjct: 97 RGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEG 156
Query: 242 VGGDSFVACALIDMY-------------------------------SKCGSIEDAQCAFD 270
+ DSF+ ++ MY +KCG I+ AQ FD
Sbjct: 157 LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFD 216
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEH 330
+MP++ V WNS+I+G+ +G ++AL ++ EM++ K D FT+ ++ C L + E
Sbjct: 217 EMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 331 AKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGN 390
+ H +VR+ F + + TAL+D Y K G +E+ +VF+ +K + WN++I G N
Sbjct: 277 GRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 391 HGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 450
+G E+A+ +F ++ R + P+ V+F+ VL+AC++SG R E F M + ++P
Sbjct: 337 NGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 451 HYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM 510
HY M+ +LG GLL+EA ALI+ P E +W +LL+ACR GN+E+ K AA+ L ++
Sbjct: 397 HYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKL 456
Query: 511 DPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKS 570
DP + C YV+L N Y S G +EA +K + + C+ IEV + H F+ +
Sbjct: 457 DPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGT 516
Query: 571 HTQTKEIYQKVD--------------EILDEISRHGY 593
H ++ EIY +D E+ D +R G+
Sbjct: 517 HPKSAEIYSLLDILNWDVSTIKSGFAELFDATTRIGF 553
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 144/319 (45%), Gaps = 33/319 (10%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD-------- 163
TY ++ L R +++ +I G E D ++ N +L M+V CG +++
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 164 -----------------------ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFL 200
A+ LF +MP+R+ VSW ++I G V +G + +A +F
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG 260
M + T +++ A A LG + GR IH ++ +S V ALIDMY KCG
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
IE+ F+ P+K WNS+I G A +G+ E A+ ++ E+ SG + D + V+
Sbjct: 308 CIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLT 367
Query: 321 ICVRLASLEHAKQAHAALV-RHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH-RKNV 378
C + A + + ++ I T +V+ G +E+A + M ++
Sbjct: 368 ACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDT 427
Query: 379 ISWNALIAGYGNHGQGEQA 397
+ W++L++ G E A
Sbjct: 428 VIWSSLLSACRKIGNVEMA 446
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/527 (29%), Positives = 264/527 (50%), Gaps = 39/527 (7%)
Query: 104 DCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD 163
D + S L++V ++I V + +I + + D +++ ++ + +
Sbjct: 20 DSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDY 79
Query: 164 ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAG 223
A +F + +V + +I G V SG ++ L+ M + ++++A
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD- 138
Query: 224 LGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE--------- 274
++V R+IH+ LK+G G V ++++Y K G + +A+ FD+MP+
Sbjct: 139 ---LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVM 195
Query: 275 ----------------------KTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDH 312
K TV W ++I G + +AL ++ EM+ +
Sbjct: 196 INCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANE 255
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
FT V+ C L +LE + H+ + AL++ YS+ G + +AR VF
Sbjct: 256 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRV 315
Query: 373 MHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG 432
M K+VIS+N +I+G HG +AI F M+ PN VT +A+L+ACS+ GL + G
Sbjct: 316 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 375
Query: 433 WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACR 492
E+F SM R V+P+ HY C+++LLGR G L+EA+ I P EP M LL+AC+
Sbjct: 376 LEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACK 435
Query: 493 MHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTC 552
+HGN+ELG+ A++L+E + YV+L N+Y SSGK KE+ + ++++ G+ P C
Sbjct: 436 IHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGC 495
Query: 553 TWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEM 599
+ IEV Q H FL GD +H + IYQ+ L E++R KEN++
Sbjct: 496 STIEVDNQIHEFLVGDIAHPHKEAIYQR----LQELNRILRFKENQI 538
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 115/244 (47%), Gaps = 10/244 (4%)
Query: 55 YVDRKMPVLDDAQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYD 114
++ + + D +I T + I+ L +A+ELF +++E +V A+ +
Sbjct: 204 FIKEALELFQDVKI--KDTVCWTAMIDGLVRNKEMNKALELFREMQME----NVSANEFT 257
Query: 115 AL--VNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
A+ ++ C L ++ + V +++ + E ++ N ++ M+ +CG + +AR++F M
Sbjct: 258 AVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR 317
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQ 232
++DV+S+ T+I GL G EA F M T ++ A + GL+ +G +
Sbjct: 318 DKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLE 377
Query: 233 I-HSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP-EKTTVGWNSIIAGYALH 290
+ +S V ++D+ + G +E+A + +P E + ++++ +H
Sbjct: 378 VFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIH 437
Query: 291 GYSE 294
G E
Sbjct: 438 GNME 441
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/460 (31%), Positives = 237/460 (51%), Gaps = 40/460 (8%)
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF 199
GF + + ++ + G + +ARK+F +MPERD ++W T++ D A
Sbjct: 899 GFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSA---- 954
Query: 200 LFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKC 259
+S A +M ++ C LI+ Y
Sbjct: 955 ----------------------------------NSLANQMSEKNEATSNC-LINGYMGL 979
Query: 260 GSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVI 319
G++E A+ F+QMP K + W ++I GY+ + EA++++ +M + G D T+S VI
Sbjct: 980 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 320 RICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVI 379
C L LE K+ H +++GF D+ +ALVD YSK G +E A VF + +KN+
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 1099
Query: 380 SWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 439
WN++I G HG ++A++MF +M E V PN VTF++V +AC+++GL + G I+ SM
Sbjct: 1100 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Query: 440 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLEL 499
D+ + HY M+ L + GL+ EA LI FEP +W ALL CR+H NL +
Sbjct: 1160 IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVI 1219
Query: 500 GKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL-RMLPTCTWIEVK 558
+ A KL ++P Y +L+++Y + ++ A + ++ G+ ++ P + I +
Sbjct: 1220 AEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRID 1279
Query: 559 KQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENE 598
K+ H F DKSH+ + E+ +DEI D++ GY++E E
Sbjct: 1280 KRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETE 1319
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 140/348 (40%), Gaps = 80/348 (22%)
Query: 250 CALIDMY-SKCGS---IEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRD 305
C L++ + + C S ++ A QM E +N++ G+ + +L +Y+ M
Sbjct: 805 CRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR 864
Query: 306 SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMED 365
+T S +++ + + QAH + + GFG + T L+DFYS GR+ +
Sbjct: 865 DSVSPSSYTYSSLVKASSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIRE 922
Query: 366 ARHVFDRMHRKNVISW-------------------------------NALIAGYGNHGQG 394
AR VFD M ++ I+W N LI GY G
Sbjct: 923 ARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNL 982
Query: 395 EQAIQMFEQ-------------------------------MLRERVIPNHVTFLAVLSAC 423
EQA +F Q M+ E +IP+ VT V+SAC
Sbjct: 983 EQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISAC 1042
Query: 424 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNM 483
++ G+ E G E+ ++ V + A ++++ + G L+ A + P KN+
Sbjct: 1043 AHLGVLEIGKEVHMYTLQNGFVLDVYIGSA-LVDMYSKCGSLERALLVFFNL---PKKNL 1098
Query: 484 --WVALLTACRMHGNLE--LGKFAAEKLYEMDPGKLCNYVMLLNIYNS 527
W +++ HG + L FA ++ + P N V ++++ +
Sbjct: 1099 FCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP----NAVTFVSVFTA 1142
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 4/205 (1%)
Query: 88 RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
R+REA+ +F + EG D T +++ C L + K+V Y + +GF D+Y+
Sbjct: 1012 RYREAIAVFYKMMEEGIIPD--EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYI 1069
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
+ ++ M+ KCG + A +F ++P++++ W ++I GL G EA +F M +E
Sbjct: 1070 GSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESV 1129
Query: 208 DGRSRTFATMVRASAGLGLIQVGRQIHSCAL-KMGVGGDSFVACALIDMYSKCGSIEDAQ 266
+ TF ++ A GL+ GR+I+ + + + ++ ++SK G I +A
Sbjct: 1130 KPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEAL 1189
Query: 267 CAFDQMP-EKTTVGWNSIIAGYALH 290
M E V W +++ G +H
Sbjct: 1190 ELIGNMEFEPNAVIWGALLDGCRIH 1214
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 157/544 (28%), Positives = 266/544 (48%), Gaps = 74/544 (13%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
+I G + +L+++N +L ++ K G M DA LF +MP R+ +SW +I G D A
Sbjct: 184 VIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESA 243
Query: 196 FGLFLFM-----------WVEF------------------------NDGRSRTFATMVRA 220
+F +M W N A
Sbjct: 244 VKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSV 303
Query: 221 SAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGW 280
A L + + ++H +K G ALI +Y K G ++DA+ F Q+ K W
Sbjct: 304 CAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESW 363
Query: 281 NSIIAGYALHGYSEEALSIYLEMRD----------------------------------- 305
NS+I + G +EALS++ E+ +
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 306 ----SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
S + TI ++ IC L +L ++ H ++R +I+ ALV+ Y+K G
Sbjct: 424 QMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCG 483
Query: 362 RMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS 421
+ + VF+ + K++ISWN++I GYG HG E+A+ MF++M+ P+ + +AVLS
Sbjct: 484 LLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLS 543
Query: 422 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTK 481
ACS++GL E+G EIFYSMS+ ++P+ HYAC+++LLGR G L EA +++ P EP
Sbjct: 544 ACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
Query: 482 NMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
+ ALL +CRMH N+++ + A +L ++P + +Y++L NIY++ G+ +E+A V
Sbjct: 604 CVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALA 663
Query: 542 KRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLL 601
K+K L+ + +WIEVKK+ + F G ++ + IY +++++ + + G +
Sbjct: 664 KKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYE 723
Query: 602 PDVD 605
D+D
Sbjct: 724 DDLD 727
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/546 (21%), Positives = 223/546 (40%), Gaps = 124/546 (22%)
Query: 113 YDALVNVCVGLRSIRGVKK---VFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFG 169
+D L+ +C+ + R V + +++ SG + ++ ++ + GL+LDAR +F
Sbjct: 59 FDHLLGLCLTAQQCRQVHAQVLLSDFIFRSG-----SLAANLISVYARLGLLLDARNVFE 113
Query: 170 DMPE---RDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL 226
+ D+ W +++ V G Y A L+ M G ++RA LG
Sbjct: 114 TVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGR 173
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAG 286
+ R H+ +++G+ + V L+ +Y K G + DA F +MP + + WN +I G
Sbjct: 174 FGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKG 233
Query: 287 YALH-----------------------------------GYSEEALSIYLEMRDSGAKID 311
++ G E+ L + MR SG +
Sbjct: 234 FSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVS 293
Query: 312 HFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
+++ +C L +L A++ H +++ GF + + AL+ Y K G+++DA H+F
Sbjct: 294 GEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFR 353
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE----RVIPNHVTFLAVLSACSYSG 427
++ K + SWN+LI + + G+ ++A+ +F ++ V N VT+ +V+ C+ G
Sbjct: 354 QIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQG 413
Query: 428 LSERGWEIFYSMSRDHKVKPRAMHYACMIEL--------LGRE----------------- 462
+ E F M KV ++ C++ + LGRE
Sbjct: 414 RGDDSLEYFRQMQFS-KVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQ 472
Query: 463 ----------GLLDEA---FALIR-------------------------------RAPFE 478
GLL E F IR + F
Sbjct: 473 NALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFH 532
Query: 479 PTKNMWVALLTACRMHGNLELGK---FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAA 535
P VA+L+AC G +E G+ ++ K + ++P + +Y ++++ G LKEA+
Sbjct: 533 PDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQE-HYACIVDLLGRVGFLKEAS 591
Query: 536 GVLQTL 541
+++ +
Sbjct: 592 EIVKNM 597
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 147/347 (42%), Gaps = 46/347 (13%)
Query: 69 MKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRG 128
KP S + C + + ++ F ++ + G+ V +VC L ++
Sbjct: 255 FKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNA--VSGEALAVFFSVCAELEALSI 312
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHV--KCGLMLDARKLFGDMPERDVVSWMTVIGGL 186
+KV Y+I GFE Y+ +R L+HV K G + DA LF + + + SW ++I
Sbjct: 313 AEKVHGYVIKGGFEE--YLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSF 370
Query: 187 VDSGDYSEAFGLF---------------LFMWVEFNDG---------------------- 209
VD+G EA LF + W G
Sbjct: 371 VDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKV 430
Query: 210 --RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQC 267
S T ++ A L + +GR+IH ++ + + V AL++MY+KCG + +
Sbjct: 431 LANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSL 490
Query: 268 AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLAS 327
F+ + +K + WNSII GY +HG++E+ALS++ M SG D + V+ C
Sbjct: 491 VFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGL 550
Query: 328 LEHAKQAHAALV-RHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM 373
+E ++ ++ R G +VD + G +++A + M
Sbjct: 551 VEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 143/323 (44%), Gaps = 36/323 (11%)
Query: 228 QVGRQIHS-CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG---WNSI 283
Q RQ+H+ L + +A LI +Y++ G + DA+ F+ + WNSI
Sbjct: 70 QQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSI 129
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
+ HG E AL +Y MR G D + + +++R C L + H +++ G
Sbjct: 130 LKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGL 189
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQ 403
++ L+ Y K GRM DA ++F M +N +SWN +I G+ E A+++FE
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 404 MLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 463
M RE P+ VT+ +VLS S G E + F+ M +
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR------------------MSGNA 291
Query: 464 LLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLN 523
+ EA A+ E AL A ++HG + G F E P + L++
Sbjct: 292 VSGEALAVFFSVCAELE-----ALSIAEKVHGYVIKGGFE-----EYLPSRNA----LIH 337
Query: 524 IYNSSGKLKEAAGVLQTLKRKGL 546
+Y GK+K+A + + ++ KG+
Sbjct: 338 VYGKQGKVKDAEHLFRQIRNKGI 360
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 69 MKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRG 128
+K + S I+ + R +++E F ++ A+ + T ++++C L ++
Sbjct: 395 VKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLAN--SVTICCILSICAELPALNL 452
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVD 188
+++ ++I + ++ + N ++ M+ KCGL+ + +F + ++D++SW ++I G
Sbjct: 453 GREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGM 512
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQI-HSCALKMGVGGDSF 247
G +A +F M ++ A + GL++ GR+I +S + + G+
Sbjct: 513 HGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQE 572
Query: 248 VACALIDMYSKCGSIEDAQCAFDQMPEKTTV 278
++D+ + G +++A MP + V
Sbjct: 573 HYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 256 bits (653), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 284/553 (51%), Gaps = 57/553 (10%)
Query: 90 REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMN 149
REA ELF+ ++ + T+ A+V+ + + + + +F M E ++ N
Sbjct: 94 REARELFDRVDSRKNVV-----TWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWN 144
Query: 150 RVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDG 209
++ + + G + A +LF +MPER++VSW +++ LV G EA LF M D
Sbjct: 145 TMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM--PRRDV 202
Query: 210 RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ--- 266
S T MV A G + R++ C + + A+I Y++ I++A
Sbjct: 203 VSWT--AMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLF 256
Query: 267 ---------------------------CA-FDQMPEKTTVGWNSIIAGYALHGYSEEALS 298
C FD+MPEK + W ++I GY + +EEAL+
Sbjct: 257 QVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALN 316
Query: 299 IYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFY 357
++ +M RD K + T ++ C LA L +Q H + + + + +AL++ Y
Sbjct: 317 VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMY 376
Query: 358 SKWGRMEDARHVFDR--MHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVT 415
SK G + AR +FD + ++++ISWN++IA Y +HG G++AI+M+ QM + P+ VT
Sbjct: 377 SKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVT 436
Query: 416 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRA 475
+L +L ACS++GL E+G E F + RD + R HY C+++L GR G L + I
Sbjct: 437 YLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCD 496
Query: 476 PFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAA 535
+++ + A+L+AC +H + + K +K+ E YV++ NIY ++GK +EAA
Sbjct: 497 DARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAA 556
Query: 536 GVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIK 595
+ +K KGL+ P C+W++V KQ H F+ GDKSH Q ++ +D IL ++ ++
Sbjct: 557 EMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQ----FEALDSILSDL--RNKMR 610
Query: 596 ENEMLLPDVDEEE 608
+N+ + D +E E
Sbjct: 611 KNKNVTSDAEEAE 623
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 187/426 (43%), Gaps = 87/426 (20%)
Query: 157 KCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFAT 216
K G + +ARKLF +PERDVV+W VI G + GD EA LF + D R
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELF-----DRVDSRKNVVTW 112
Query: 217 MVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKT 276
A++ Y + + A+ F +MPE+
Sbjct: 113 ---------------------------------TAMVSGYLRSKQLSIAEMLFQEMPERN 139
Query: 277 TVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHA 336
V WN++I GYA G ++AL ++ EM + + + +++ V+ ++ A
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFE 195
Query: 337 ALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQ 396
+ R D+V+ TA+VD +K G++++AR +FD M +N+ISWNA+I GY + + ++
Sbjct: 196 RMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDE 251
Query: 397 AIQMFEQM---------------LRERVI------------PNHVTFLAVLSACSYSGLS 429
A Q+F+ M +R R + N +++ +++ + +
Sbjct: 252 ADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKEN 311
Query: 430 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGR-EGLLD--EAFALIRRAPFEPTKNMWVA 486
E +F M RD VKP Y ++ GL++ + LI ++ + + + A
Sbjct: 312 EEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSA 371
Query: 487 LLTACRMHGNLELGKFAAEKLYEMDPGKLC-----NYVMLLNIYNSSGKLKEAAGVLQTL 541
LL G L AA K++ D G +C ++ ++ +Y G KEA + +
Sbjct: 372 LLNMYSKSGEL----IAARKMF--DNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQM 425
Query: 542 KRKGLR 547
++ G +
Sbjct: 426 RKHGFK 431
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 195/470 (41%), Gaps = 121/470 (25%)
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFG-------------------------------- 169
E D+ V+ ++K G M +AR+LF
Sbjct: 74 ERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQ 133
Query: 170 DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQV 229
+MPER+VVSW T+I G SG +A LF E + ++ +MV+A L+Q
Sbjct: 134 EMPERNVVSWNTMIDGYAQSGRIDKALELF----DEMPERNIVSWNSMVKA-----LVQR 184
Query: 230 GRQIHSCALKMGVGGDSFVA-CALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
GR + L + V+ A++D +K G +++A+ FD MPE+ + WN++I GYA
Sbjct: 185 GRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYA 244
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
+ +EA ++ M + D
Sbjct: 245 QNNRIDEADQLFQVMPE---------------------------------------RDFA 265
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE- 407
+ ++ + + M A +FDRM KNVISW +I GY + + E+A+ +F +MLR+
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 408 RVIPNHVTFLAVLSACS-YSGLSERGWEIFYSMSRDHKVKPRAMHYACMI------ELLG 460
V PN T++++LSACS +GL E G +I +S+ K + A + EL+
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLVE-GQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIA 384
Query: 461 REGLLD-----------------------------EAFALIRRAPFEPTKNMWVALLTAC 491
+ D E + +R+ F+P+ ++ LL AC
Sbjct: 385 ARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFAC 444
Query: 492 RMHGNLELGKFAAEKLY--EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQ 539
G +E G + L E P + +Y L+++ +G+LK+ +
Sbjct: 445 SHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFIN 494
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 162/354 (45%), Gaps = 27/354 (7%)
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKID 311
LI K G I +A+ FD +PE+ V W +I GY G EA ++ + DS +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELF-DRVDSRKNV- 109
Query: 312 HFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
T + ++ +R L A+ L + ++V+ ++D Y++ GR++ A +FD
Sbjct: 110 -VTWTAMVSGYLRSKQLSIAEM----LFQEMPERNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 431
M +N++SWN+++ G+ ++A+ +FE+M R V V++ A++ + +G +
Sbjct: 165 EMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDE 220
Query: 432 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTAC 491
+F M + + + MI + +DEA L + P E W ++T
Sbjct: 221 ARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMITG- 273
Query: 492 RMHGNLELGKFAAEKLYEMDPGK-LCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLP 550
N E+ K A L++ P K + ++ ++ Y + + +EA V + R G
Sbjct: 274 -FIRNREMNK--ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPN 330
Query: 551 TCTWIEVK---KQPHAFLCGDKSHTQ-TKEIYQKVDEILDEISRHGYIKENEML 600
T++ + + G + H +K ++QK +EI+ + Y K E++
Sbjct: 331 VGTYVSILSACSDLAGLVEGQQIHQLISKSVHQK-NEIVTSALLNMYSKSGELI 383
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 255/469 (54%), Gaps = 4/469 (0%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLL-MHVKCGLMLDARKLFGD 170
T ++++ C + IR K V + + +P+ ++ L+ ++ +CG + D +
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRV 364
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVG 230
+ +R++V+W ++I G +A GLF M + + T A+ + A GL+ +G
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
+QIH ++ V D FV +LIDMYSK GS++ A F+Q+ ++ V WNS++ G++ +
Sbjct: 425 KQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
G S EA+S++ M S +++ T VI+ C + SLE K H L+ G D+ +
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTD 542
Query: 351 TALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI 410
TAL+D Y+K G + A VF M ++++SW+++I YG HG+ AI F QM+
Sbjct: 543 TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTK 602
Query: 411 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 470
PN V F+ VLSAC +SG E G + ++++ + V P + H+AC I+LL R G L EA+
Sbjct: 603 PNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYR 661
Query: 471 LIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGK 530
I+ PF ++W +L+ CR+H +++ K L ++ Y +L NIY G+
Sbjct: 662 TIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGE 721
Query: 531 LKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQ 579
+E + +K L+ +P + IE+ ++ F G+++ QT EIY+
Sbjct: 722 WEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYR 770
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 233/490 (47%), Gaps = 36/490 (7%)
Query: 86 CNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVK-KVFNYMISSGFEPD 144
C+ A++L+ L + + + +++ C G R V KV +I G + D
Sbjct: 78 CHLLDAAIDLYH--RLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDD 135
Query: 145 LYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWV 204
+ +L M+ + G + DA K+F MP RD+V+W T++ +++G+ +A +F M
Sbjct: 136 AVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVD 195
Query: 205 EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED 264
+ + + T ++V A LG +++ R +H + D + +L+ MYSKCG +
Sbjct: 196 DGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLS 255
Query: 265 AQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
++ F+++ +K V W ++I+ Y +SE+AL + EM SG + + T+ V+ C
Sbjct: 256 SERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGL 315
Query: 325 LASLEHAKQAHAALVRHGFGSDIVA-NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
+ + K H VR + + + ALV+ Y++ G++ D V + +N+++WN+
Sbjct: 316 IGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNS 375
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI-------- 435
LI+ Y + G QA+ +F QM+ +R+ P+ T + +SAC +GL G +I
Sbjct: 376 LISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD 435
Query: 436 ------------FYSMSRD--------HKVKPRA-MHYACMIELLGREGLLDEAFAL--- 471
YS S +++K R+ + + M+ + G EA +L
Sbjct: 436 VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDY 495
Query: 472 IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKL 531
+ + E + ++A++ AC G+LE GK+ KL L L+++Y G L
Sbjct: 496 MYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDL 555
Query: 532 KEAAGVLQTL 541
A V + +
Sbjct: 556 NAAETVFRAM 565
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 242/447 (54%), Gaps = 8/447 (1%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
++ L+ +C +++ ++ M+ G E + ++ + KCGL+++AR++F +
Sbjct: 144 SFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV 203
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR--TFATMVRASAGLGLIQV 229
+RD+V W ++ V +G EAFGL M + N R TF++++ A I+
Sbjct: 204 LDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQ 259
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
G+QIH+ K+ D VA AL++MY+K + DA+ F+ M + V WN++I G+A
Sbjct: 260 GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQ 319
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
+G EA+ ++ +M + D T + V+ C + +++ KQ A + + G +
Sbjct: 320 NGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSV 379
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
+L+ YS+ G + +A F + +++SW ++I +HG E+++QMFE ML +++
Sbjct: 380 ANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML-QKL 438
Query: 410 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 469
P+ +TFL VLSACS+ GL + G F M+ +K++ HY C+I+LLGR G +DEA
Sbjct: 439 QPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEAS 498
Query: 470 ALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSG 529
++ P EP+ + A C +H E K+ A+KL E++P K NY +L N Y S G
Sbjct: 499 DVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEG 558
Query: 530 KLKEAAGVLQTLKRKGLR-MLPTCTWI 555
+AA + + +R P C+W+
Sbjct: 559 HWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 228/464 (49%), Gaps = 45/464 (9%)
Query: 119 VCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVS 178
+ L + VK+ +M+ G L++ N++L + K DA KLF +MP R++V+
Sbjct: 45 LSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVT 104
Query: 179 WMTVIGGLVD-SGD--YSEAFGLFLFMWVEFNDGR--SRTFATMVRASAGLGLIQVGRQI 233
W +I G++ GD + G + F D +F ++R ++ G Q+
Sbjct: 105 WNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQL 164
Query: 234 HSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYS 293
H +K G+ F + +L+ Y KCG I +A+ F+ + ++ V WN++++ Y L+G
Sbjct: 165 HCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMI 224
Query: 294 EEALSIYLEMRDSGAKI--DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
+EA + M + D+FT S ++ C +E KQ HA L + + DI T
Sbjct: 225 DEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVAT 280
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
AL++ Y+K + DAR F+ M +NV+SWNA+I G+ +G+G +A+++F QML E + P
Sbjct: 281 ALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQP 340
Query: 412 NHVTFLAVLSACS-YSGL----------SERGWEIFYSMSRD------------------ 442
+ +TF +VLS+C+ +S + +++G F S++
Sbjct: 341 DELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCF 400
Query: 443 HKVK-PRAMHYACMIELLGREGLLDEAFALIRR--APFEPTKNMWVALLTACRMHGNLEL 499
H ++ P + + +I L G +E+ + +P K ++ +L+AC G ++
Sbjct: 401 HSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQE 460
Query: 500 GKFAAEKLYEMDP--GKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
G +++ E + +Y L+++ +G + EA+ VL ++
Sbjct: 461 GLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 219 RASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTV 278
+ SA L + +Q H +K G+ F+ L+ Y+K +DA FD+MP + V
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 279 GWNSIIAGY----------ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
WN +I G A G+ + ++ ++ +DH + +IR+C ++
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDV-----SLDHVSFMGLIRLCTDSTNM 158
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
+ Q H +V+ G S +T+LV FY K G + +AR VF+ + ++++ WNAL++ Y
Sbjct: 159 KAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSY 218
Query: 389 GNHGQGEQAIQMFEQM--LRERVIPNHVTFLAVLSAC 423
+G ++A + + M + R ++ TF ++LSAC
Sbjct: 219 VLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 253 bits (645), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/484 (31%), Positives = 244/484 (50%), Gaps = 42/484 (8%)
Query: 95 LFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLM 154
LF + EGD V ++T + C R ++ + E DL++ N ++ M
Sbjct: 261 LFLRMRQEGD-VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSM 319
Query: 155 HVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR-T 213
+ K G M +A+ +FG M +D VSW ++I GLV SEA+ LF E G+ +
Sbjct: 320 YSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELF-----EKMPGKDMVS 374
Query: 214 FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP 273
+ M++ +G G I SKC + F MP
Sbjct: 375 WTDMIKGFSGKGEI-----------------------------SKCVEL------FGMMP 399
Query: 274 EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQ 333
EK + W ++I+ + +GY EEAL + +M + +T S V+ LA L Q
Sbjct: 400 EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQ 459
Query: 334 AHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQ 393
H +V+ +D+ +LV Y K G DA +F + N++S+N +I+GY +G
Sbjct: 460 IHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGF 519
Query: 394 GEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYA 453
G++A+++F + PN VTFLA+LSAC + G + GW+ F SM + ++P HYA
Sbjct: 520 GKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYA 579
Query: 454 CMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPG 513
CM++LLGR GLLD+A LI P +P +W +LL+A + H ++L + AA+KL E++P
Sbjct: 580 CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPD 639
Query: 514 KLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQ 573
YV+L +Y+ GK ++ ++ K K ++ P +WI +K + H FL GD+S
Sbjct: 640 SATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLN 699
Query: 574 TKEI 577
+EI
Sbjct: 700 LEEI 703
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 190/424 (44%), Gaps = 77/424 (18%)
Query: 155 HVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN-DGRSRT 213
+ K G ++DAR LF M ER+V++W +I G +G + + FGLFL M E + S T
Sbjct: 218 YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 214 FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP 273
A M +A + G QIH +M + D F+ +L+ MYSK G + +A+ F M
Sbjct: 278 LAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
Query: 274 EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQ 333
K +V WNS+I G EA ++ +M
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKMP----------------------------- 368
Query: 334 AHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQ 393
G D+V+ T ++ +S G + +F M K+ I+W A+I+ + ++G
Sbjct: 369 ----------GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGY 418
Query: 394 GEQAIQMFEQMLRERVIPNHVTFLAVLSACS-----YSGLSERGWEIFYSMSRDHKVK-- 446
E+A+ F +ML++ V PN TF +VLSA + GL G + ++ D V+
Sbjct: 419 YEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNS 478
Query: 447 -----------------------PRAMHYACMIELLGREGLLDEA---FALIRRAPFEPT 480
P + Y MI G +A F+++ + EP
Sbjct: 479 LVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Query: 481 KNMWVALLTACRMHGNLELG-KF--AAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGV 537
++ALL+AC G ++LG K+ + + Y ++PG +Y ++++ SG L +A+ +
Sbjct: 539 GVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGP-DHYACMVDLLGRSGLLDDASNL 597
Query: 538 LQTL 541
+ T+
Sbjct: 598 ISTM 601
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 131/250 (52%), Gaps = 10/250 (4%)
Query: 157 KCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFAT 216
KC L A +LF D+PE++ VS+ T+I G V +G + EA L+ V+F D + A+
Sbjct: 126 KCDLG-KAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRD----SVAS 180
Query: 217 MVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACA-LIDMYSKCGSIEDAQCAFDQMPEK 275
V S G ++ G+ + + G+ V+C+ ++ Y K G I DA+ FD+M E+
Sbjct: 181 NVLLS---GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER 237
Query: 276 TTVGWNSIIAGYALHGYSEEALSIYLEMRDSG-AKIDHFTISIVIRICVRLASLEHAKQA 334
+ W ++I GY G+ E+ ++L MR G K++ T++++ + C Q
Sbjct: 238 NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQI 297
Query: 335 HAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQG 394
H + R D+ +L+ YSK G M +A+ VF M K+ +SWN+LI G Q
Sbjct: 298 HGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQI 357
Query: 395 EQAIQMFEQM 404
+A ++FE+M
Sbjct: 358 SEAYELFEKM 367
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 179/445 (40%), Gaps = 77/445 (17%)
Query: 118 NVCVGLRSIRGV-------KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
N+C+ S V +K N++ ++ ++ N + H + G + +A +F
Sbjct: 16 NICLRCNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQ 75
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVG 230
M R +VSW+ +I ++G S+A+ +F M V + M++ LG
Sbjct: 76 MSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLG----- 130
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
A F +PEK V + ++I G+
Sbjct: 131 ---------------------------------KAYELFCDIPEKNAVSYATMITGFVRA 157
Query: 291 GYSEEALSIYLE----MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFG-S 345
G +EA +Y E RDS A ++++ L K A V G
Sbjct: 158 GRFDEAEFLYAETPVKFRDSVAS------NVLLS-----GYLRAGKWNEAVRVFQGMAVK 206
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
++V+ +++V Y K GR+ DAR +FDRM +NVI+W A+I GY G E +F +M
Sbjct: 207 EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
Query: 406 RE-RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGL 464
+E V N T + AC G +I +SR ++ ++ + + G
Sbjct: 267 QEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSR-MPLEFDLFLGNSLMSMYSKLGY 325
Query: 465 LDEAFALIRRAPFEPTKNM----WVALLTACRMHGNLELGKFAAEKLYEMDPGK-LCNYV 519
+ EA +A F KN W +L+T + A +L+E PGK + ++
Sbjct: 326 MGEA-----KAVFGVMKNKDSVSWNSLITGLVQRKQIS----EAYELFEKMPGKDMVSWT 376
Query: 520 MLLNIYNSSGKLKEAAGVLQTLKRK 544
++ ++ G++ + + + K
Sbjct: 377 DMIKGFSGKGEISKCVELFGMMPEK 401
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 237/432 (54%), Gaps = 8/432 (1%)
Query: 131 KVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSG 190
+V I +G+E + N + M+ A K+F + E+D+V+W T+I +
Sbjct: 309 QVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAK 368
Query: 191 DYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVAC 250
A ++ M + TF +++ S L ++++ + +C +K G+ ++
Sbjct: 369 LGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISN 425
Query: 251 ALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI 310
ALI YSK G IE A F++ K + WN+II+G+ +G+ E L + + +S +I
Sbjct: 426 ALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRI 485
Query: 311 --DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARH 368
D +T+S ++ ICV +SL Q HA ++RHG + + AL++ YS+ G ++++
Sbjct: 486 LPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLE 545
Query: 369 VFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE-RVIPNHVTFLAVLSACSYSG 427
VF++M K+V+SWN+LI+ Y HG+GE A+ ++ M E +VIP+ TF AVLSACS++G
Sbjct: 546 VFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAG 605
Query: 428 LSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR--RAPFEPTKNMWV 485
L E G EIF SM H V H++C+++LLGR G LDEA +L++ ++W
Sbjct: 606 LVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWW 665
Query: 486 ALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
AL +AC HG+L+LGK A+ L E + YV L NIY +G KEA + + G
Sbjct: 666 ALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIG 725
Query: 546 LRMLPTCTWIEV 557
C+W+ +
Sbjct: 726 AMKQRGCSWMRL 737
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 202/444 (45%), Gaps = 23/444 (5%)
Query: 59 KMPVLDDAQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVN 118
KMP DD I G C + H ++ELF + G D + +++
Sbjct: 148 KMPERDDVAIWNAMITG-CKE------SGYHETSVELFREMHKLGVRHDKFG--FATILS 198
Query: 119 VCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLF--GDMPERDV 176
+C S+ K+V + +I +GF ++N ++ M+ C +++DA +F D+ RD
Sbjct: 199 MC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 177 VSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSC 236
V++ VI GL + L +F + T T V +G Q+H
Sbjct: 258 VTFNVVIDGL---AGFKRDESLLVFRKM-LEASLRPTDLTFVSVMGSCSCAAMGHQVHGL 313
Query: 237 ALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEA 296
A+K G + V+ A + MYS A F+ + EK V WN++I+ Y + A
Sbjct: 314 AIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSA 373
Query: 297 LSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDF 356
+S+Y M G K D FT ++ + L LE A +++ G S I + AL+
Sbjct: 374 MSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE---MVQACIIKFGLSSKIEISNALISA 430
Query: 357 YSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE--RVIPNHV 414
YSK G++E A +F+R RKN+ISWNA+I+G+ ++G + ++ F +L R++P+
Sbjct: 431 YSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAY 490
Query: 415 TFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
T +LS C + G + + R + K + A +I + + G + + + +
Sbjct: 491 TLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNA-LINMYSQCGTIQNSLEVFNQ 549
Query: 475 APFEPTKNMWVALLTACRMHGNLE 498
E W +L++A HG E
Sbjct: 550 MS-EKDVVSWNSLISAYSRHGEGE 572
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 10/285 (3%)
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVS-WMTVIGGLVDSGDYSEAFGLFL 200
EPD+Y +L K G + A ++F MPERD V+ W +I G +SG + + LF
Sbjct: 120 EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFR 179
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG 260
M FAT++ + G + G+Q+HS +K G S V ALI MY C
Sbjct: 180 EMHKLGVRHDKFGFATIL-SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQ 238
Query: 261 SIEDAQCAFDQ--MPEKTTVGWNSIIAGYALHGYS-EEALSIYLEMRDSGAKIDHFTISI 317
+ DA F++ + + V +N +I G A G+ +E+L ++ +M ++ + T
Sbjct: 239 VVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVS 296
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKN 377
V+ C A++ H Q H ++ G+ + + A + YS + A VF+ + K+
Sbjct: 297 VMGSC-SCAAMGH--QVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKD 353
Query: 378 VISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
+++WN +I+ Y G+ A+ ++++M V P+ TF ++L+
Sbjct: 354 LVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLAT 398
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 13/220 (5%)
Query: 276 TTVGWNSIIAGYALHGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQA 334
T + N + G G + AL ++ ++ R + + D +++S+ I L Q
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQV 79
Query: 335 HAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQG 394
H +R G + L+ Y + G + + FD + +V SW L++ G
Sbjct: 80 HCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 395 EQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR--AMHY 452
E A ++F++M ER + + A+++ C SG E E+F M HK+ R +
Sbjct: 140 EYAFEVFDKM-PER--DDVAIWNAMITGCKESGYHETSVELFREM---HKLGVRHDKFGF 193
Query: 453 ACMIELLGREGLLD---EAFALIRRAPFEPTKNMWVALLT 489
A ++ + G LD + +L+ +A F ++ AL+T
Sbjct: 194 ATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALIT 232
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 248 bits (634), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 208/363 (57%), Gaps = 2/363 (0%)
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAG 286
+ G H ALK G D ++ +L+ +Y G +E+A F++MPE+ V W ++I+G
Sbjct: 136 FRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISG 195
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
+A + L +Y +MR S + + +T + ++ C +L + H + G S
Sbjct: 196 FAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSY 255
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML- 405
+ + +L+ Y K G ++DA +FD+ K+V+SWN++IAGY HG QAI++FE M+
Sbjct: 256 LHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMP 315
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
+ P+ +T+L VLS+C ++GL + G + F+++ +H +KP HY+C+++LLGR GLL
Sbjct: 316 KSGTKPDAITYLGVLSSCRHAGLVKEGRK-FFNLMAEHGLKPELNHYSCLVDLLGRFGLL 374
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIY 525
EA LI P +P +W +LL +CR+HG++ G AAE+ ++P +V L N+Y
Sbjct: 375 QEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLY 434
Query: 526 NSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEIL 585
S G KEAA V + +K KGL+ P C+WIE+ F D S+ + EI + ++
Sbjct: 435 ASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLI 494
Query: 586 DEI 588
D +
Sbjct: 495 DHM 497
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 4/293 (1%)
Query: 137 ISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAF 196
+ GF D+Y+ + +++++ G + +A K+F +MPER+VVSW +I G
Sbjct: 147 LKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICL 206
Query: 197 GLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMY 256
L+ M +D TF ++ A G G + GR +H L MG+ ++ +LI MY
Sbjct: 207 KLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMY 266
Query: 257 SKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIY-LEMRDSGAKIDHFTI 315
KCG ++DA FDQ K V WNS+IAGYA HG + +A+ ++ L M SG K D T
Sbjct: 267 CKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITY 326
Query: 316 SIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHR 375
V+ C ++ ++ + HG ++ + LVD ++G +++A + + M
Sbjct: 327 LGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPM 386
Query: 376 K-NVISWNALIAGYGNHGQGEQAIQMFEQ--MLRERVIPNHVTFLAVLSACSY 425
K N + W +L+ HG I+ E+ ML HV + ++ Y
Sbjct: 387 KPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGY 439
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 2/188 (1%)
Query: 106 ADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDAR 165
+D T+ AL++ C G ++ + V + G + L++ N ++ M+ KCG + DA
Sbjct: 217 SDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAF 276
Query: 166 KLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF-LFMWVEFNDGRSRTFATMVRASAGL 224
++F +DVVSW ++I G G +A LF L M + T+ ++ +
Sbjct: 277 RIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHA 336
Query: 225 GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK-TTVGWNSI 283
GL++ GR+ + + G+ + L+D+ + G +++A + MP K +V W S+
Sbjct: 337 GLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSL 396
Query: 284 IAGYALHG 291
+ +HG
Sbjct: 397 LFSCRVHG 404
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 239/477 (50%), Gaps = 27/477 (5%)
Query: 116 LVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERD 175
++ C L ++G ++ ++ +G DL++ N ++ +++KCG + +R++F MP+RD
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 176 VVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN-------------------DGRSRTFAT 216
VS+ ++I G V G A LF M +E D S+ FA
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD 246
Query: 217 MVRA------SAGLGLIQVGRQIHSCAL-KMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
M S G ++ GR + L + D +ID Y+K G + A+ F
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASL 328
DQMP + V +NS++AGY + Y EAL I+ +M ++S D T+ IV+ +L L
Sbjct: 307 DQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 366
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
A H +V F AL+D YSK G ++ A VF+ + K++ WNA+I G
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGL 426
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 448
HG GE A M Q+ R + P+ +TF+ VL+ACS+SGL + G F M R HK++PR
Sbjct: 427 AIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPR 486
Query: 449 AMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLY 508
HY CM+++L R G ++ A LI P EP +W LTAC H E G+ A+ L
Sbjct: 487 LQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLI 546
Query: 509 EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFL 565
+YV+L N+Y S G K+ V +K + + +P C+WIE+ + H F
Sbjct: 547 LQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFF 603
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 186/396 (46%), Gaps = 72/396 (18%)
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
+ + +++A + LG ++ G QIH K G+ D F+ LI +Y KCG + ++ FD+M
Sbjct: 123 SLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRM 182
Query: 273 PEKTTVGWNSIIAGYALHGYSEEALSIY----LEMR-------------------DSGAK 309
P++ +V +NS+I GY G A ++ +EM+ D +K
Sbjct: 183 PKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASK 242
Query: 310 I-------DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
+ D + + +I V+ +E AK + R D+V ++D Y+K G
Sbjct: 243 LFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGF 298
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE-RVIPNHVTFLAVLS 421
+ A+ +FD+M ++V+++N+++AGY + +A+++F M +E ++P+ T + VL
Sbjct: 299 VHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLP 358
Query: 422 ACSYSGLSERGWEI--------FY---------------------SMSRDHKVKPRAM-H 451
A + G + ++ FY +M ++ +++ H
Sbjct: 359 AIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH 418
Query: 452 YACMIELLGREGLLDEAFAL---IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL- 507
+ MI L GL + AF + I R +P +V +L AC G ++ G E +
Sbjct: 419 WNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMR 478
Query: 508 --YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
++++P +L +Y +++I + SG ++ A +++ +
Sbjct: 479 RKHKIEP-RLQHYGCMVDILSRSGSIELAKNLIEEM 513
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 124/256 (48%), Gaps = 17/256 (6%)
Query: 232 QIHSCALKMGVGGDSFVACALIDMYS-----------KCGSIEDAQCAFDQMPEKTTVGW 280
QIH +K G+ +S + ++ ++ +C E C+F + W
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 89
Query: 281 NSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR 340
N++I ++ +AL + M ++G +D F++S+V++ C RL ++ Q H L +
Sbjct: 90 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKK 149
Query: 341 HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQM 400
G SD+ L+ Y K G + +R +FDRM +++ +S+N++I GY G A ++
Sbjct: 150 TGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAREL 209
Query: 401 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 460
F+ M E + N +++ +++S Y+ S+ G +I + D K + + MI+
Sbjct: 210 FDLMPME--MKNLISWNSMISG--YAQTSD-GVDIASKLFADMPEKD-LISWNSMIDGYV 263
Query: 461 REGLLDEAFALIRRAP 476
+ G +++A L P
Sbjct: 264 KHGRIEDAKGLFDVMP 279
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/511 (30%), Positives = 267/511 (52%), Gaps = 54/511 (10%)
Query: 123 LRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTV 182
LR + +KV Y + +G E D Y+ N ++ M+ G + K+F +MP+RDVVSW +
Sbjct: 59 LRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGL 118
Query: 183 IGGLVDSGDYSEAFGLFLFMWVE----FNDGRSRTFATMVRASAGLGLIQVGRQIHS--- 235
I V +G + +A G+F M E F++G T + + A + L +++G +I+
Sbjct: 119 ISSYVGNGRFEDAIGVFKRMSQESNLKFDEG---TIVSTLSACSALKNLEIGERIYRFVV 175
Query: 236 CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA------- 288
+M V + AL+DM+ KCG ++ A+ FD M +K W S++ GY
Sbjct: 176 TEFEMSVR----IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDE 231
Query: 289 -------------------LHGYSE-----EALSIYLEMRDSGAKIDHFTISIVIRICVR 324
++GY + EAL ++ M+ +G + D+F + ++ C +
Sbjct: 232 ARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQ 291
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNAL 384
+LE K H + + D V TALVD Y+K G +E A VF + ++ SW +L
Sbjct: 292 TGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSL 351
Query: 385 IAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 444
I G +G +A+ ++ +M V + +TF+AVL+AC++ G G +IF+SM+ H
Sbjct: 352 IYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHN 411
Query: 445 VKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNM---WVALLTACRMHGNLELGK 501
V+P++ H +C+I+LL R GLLDEA LI + E + + + +LL+A R +GN+++ +
Sbjct: 412 VQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAE 471
Query: 502 FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQP 561
AEKL +++ + +L ++Y S+ + ++ V + +K G+R P C+ IE+
Sbjct: 472 RVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVG 531
Query: 562 HAFLCGDK--SHTQTKEI----YQKVDEILD 586
H F+ GD SH + EI +Q + +LD
Sbjct: 532 HEFIVGDDLLSHPKMDEINSMLHQTTNLMLD 562
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 171/369 (46%), Gaps = 44/369 (11%)
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
T ++++ L + G ++H A+K G+ DS+V+ +L+ MY+ G IE FD+M
Sbjct: 48 TLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEM 107
Query: 273 PEKTTVGWNSIIAGYALHGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHA 331
P++ V WN +I+ Y +G E+A+ ++ M ++S K D TI + C L +LE
Sbjct: 108 PQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIG 167
Query: 332 KQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNH 391
++ + +V F + ALVD + K G ++ AR VFD M KNV W +++ GY +
Sbjct: 168 ERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVST 226
Query: 392 GQGEQAIQMFEQMLRERVI-------------------------------PNHVTFLAVL 420
G+ ++A +FE+ + V+ P++ +++L
Sbjct: 227 GRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLL 286
Query: 421 SACSYSGLSERG-WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEP 479
+ C+ +G E+G W + +++V + ++++ + G ++ A +
Sbjct: 287 TGCAQTGALEQGKW--IHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERD 344
Query: 480 TKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKL----CNYVMLLNIYNSSGKLKEAA 535
T + W +L+ M+G + A + YEM+ + +V +L N G + E
Sbjct: 345 TAS-WTSLIYGLAMNG---MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGR 400
Query: 536 GVLQTLKRK 544
+ ++ +
Sbjct: 401 KIFHSMTER 409
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 138/271 (50%), Gaps = 11/271 (4%)
Query: 280 WNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALV 339
+N ++ A + L+++ E+R G D+FT+ +V++ RL + ++ H V
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 340 RHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQ 399
+ G D + +L+ Y+ G++E VFD M +++V+SWN LI+ Y +G+ E AI
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 400 MFEQMLRERVIP-NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIEL 458
+F++M +E + + T ++ LSACS E G I+ + + ++ R + ++++
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDM 191
Query: 459 LGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKF-AAEKLYEMDPGK-LC 516
+ G LD+A RA F+ ++ V T+ + G + G+ A L+E P K +
Sbjct: 192 FCKCGCLDKA-----RAVFDSMRDKNVKCWTSM-VFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 517 NYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
+ ++N Y + EA + + ++ G+R
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 120/289 (41%), Gaps = 37/289 (12%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
NR EA+ELF ++ G D +L+ C ++ K + Y+ + D
Sbjct: 258 NRFDEALELFRCMQTAGIRPD--NFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKV 315
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+ ++ M+ KCG + A ++F ++ ERD SW ++I GL +G A L+ M
Sbjct: 316 VGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVG 375
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQI-HSCALKMGVGGDSFVACALIDMYSKCGSIEDA 265
+ TF ++ A G + GR+I HS + V S LID+ + G +++A
Sbjct: 376 VRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEA 435
Query: 266 QCAFDQMPEKTTVGWNSIIAGYALHGYSEEAL-SIYLEMRDSGAKIDHFTISIVIRICVR 324
+ D+M G S+E L +Y + A ++ + I R+ +
Sbjct: 436 EELIDKM-----------------RGESDETLVPVYCSLL--SAARNYGNVKIAERVAEK 476
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM 373
L +E SD A+T L Y+ R ED +V +M
Sbjct: 477 LEKVEV--------------SDSSAHTLLASVYASANRWEDVTNVRRKM 511
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/494 (29%), Positives = 246/494 (49%), Gaps = 36/494 (7%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDS 189
KK+ +I G +M+ +++ K M A +LF + +V + ++I +
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 190 GDYSEAFGLF-LFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV 248
Y + ++ + F TF M ++ A LG +G+Q+H K G
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA-------------------- 288
ALIDMY K + DA FD+M E+ + WNS+++GYA
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 289 ------LHGYSE-----EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAA 337
+ GY+ EA+ + EM+ +G + D ++ V+ C +L SLE K H
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 338 LVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQA 397
R GF AL++ YSK G + A +F +M K+VISW+ +I+GY HG A
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 326
Query: 398 IQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIE 457
I+ F +M R +V PN +TFL +LSACS+ G+ + G F M +D++++P+ HY C+I+
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 458 LLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCN 517
+L R G L+ A + + P +P +W +LL++CR GNL++ A + L E++P + N
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGN 446
Query: 518 YVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEI 577
YV+L NIY GK ++ + + + ++ + ++ P + IEV F+ GD S K
Sbjct: 447 YVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS----KPF 502
Query: 578 YQKVDEILDEISRH 591
+ ++ +L + H
Sbjct: 503 WTEISIVLQLFTSH 516
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 145/297 (48%), Gaps = 8/297 (2%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T +AL+++ + + KVF+ M +E D+ N +L + + G M A+ LF M
Sbjct: 146 TENALIDMYMKFDDLVDAHKVFDEM----YERDVISWNSLLSGYARLGQMKKAKGLFHLM 201
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
++ +VSW +I G G Y EA F M + + + +++ + A LG +++G+
Sbjct: 202 LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGK 261
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
IH A + G + V ALI+MYSKCG I A F QM K + W+++I+GYA HG
Sbjct: 262 WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHG 321
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD--IVA 349
+ A+ + EM+ + K + T ++ C + + + + ++R + + I
Sbjct: 322 NAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR-YFDMMRQDYQIEPKIEH 380
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRK-NVISWNALIAGYGNHGQGEQAIQMFEQML 405
L+D ++ G++E A + M K + W +L++ G + A+ + ++
Sbjct: 381 YGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLV 437
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 124/303 (40%), Gaps = 39/303 (12%)
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
R+ S K+ +A+++ HG T +VDF K M+ A +F+++ NV +N+
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNS 78
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERV-IPNHVTFLAVLSACSYSGLSERGWEIFYSM--- 439
+I Y ++ I++++Q+LR+ +P+ TF + +C+ G G ++ +
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF 138
Query: 440 -SRDHKVKPRAM--HYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGN 496
R H V A+ Y +L+ + DE +E W +LL+ G
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEM--------YERDVISWNSLLS-----GY 185
Query: 497 LELGKFAAEK--LYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR------- 547
LG+ K + M + ++ +++ Y G EA + ++ G+
Sbjct: 186 ARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLI 245
Query: 548 -MLPTCT---------WIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKEN 597
+LP+C WI + + FL E+Y K I I G ++
Sbjct: 246 SVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK 305
Query: 598 EML 600
+++
Sbjct: 306 DVI 308
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/474 (31%), Positives = 247/474 (52%), Gaps = 22/474 (4%)
Query: 88 RHREAMELF-EILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
+H EA+ LF +++ + A T +++ C G+ + R K + Y I + E +L
Sbjct: 381 QHDEAISLFRDMMRIH---IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE 437
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
V+ M+ KCG A K F +P +D V++ + G GD ++AF ++ M +
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
SRT M++ A G ++ +K G + VA ALI+M++KC ++ A
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 267 CAFDQMP-EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRL 325
FD+ EK+TV WN ++ GY LHG +EEA++ + +M+ + + T ++R L
Sbjct: 558 VLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAEL 617
Query: 326 ASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALI 385
++L H++L++ GF S +LVD Y+K G +E + F + K ++SWN ++
Sbjct: 618 SALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTML 677
Query: 386 AGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 445
+ Y HG A+ +F M + P+ V+FL+VLSAC ++GL E G IF M HK+
Sbjct: 678 SAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKI 737
Query: 446 KPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAE 505
+ HYACM++LLG+ GL EA ++RR + + +W ALL + RMH NL L A
Sbjct: 738 EAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALC 797
Query: 506 KLYEMDPGKLCNYVMLLNI--YNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEV 557
+L +++P LN Y+ +L E V + ++ +P C+WIEV
Sbjct: 798 QLVKLEP---------LNPSHYSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 184/394 (46%), Gaps = 12/394 (3%)
Query: 89 HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMM 148
HREA+ F + E D ++ + C G + ++ + + G E D+Y+
Sbjct: 80 HREALGFFGYMSEEKG-IDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
++ M+ K ++ AR++F M +DVV+W T++ GL +G S A LF M D
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV---ACALIDMYSKCGSIEDA 265
+ ++ A + L V R +H +K G F+ + LIDMY C + A
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG-----FIFAFSSGLIDMYCNCADLYAA 253
Query: 266 QCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRL 325
+ F+++ K W +++A YA +G+ EE L ++ MR+ +++ + ++ +
Sbjct: 254 ESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYV 313
Query: 326 ASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALI 385
L H V+ G D+ T+L+ YSK G +E A +F + ++V+SW+A+I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 386 AGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF-YSMSRDHK 444
A Y GQ ++AI +F M+R + PN VT +VL C+ S G I Y++ D
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD-- 431
Query: 445 VKPRAMHYACMIELLGREGLLDEAFALIRRAPFE 478
++ +I + + G A R P +
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 187/405 (46%), Gaps = 17/405 (4%)
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVD 188
+KK F + SSG ++ M+ C + A +F ++ +D SW T++
Sbjct: 228 IKKGFIFAFSSG----------LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAH 277
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV 248
+G + E LF M A+ ++A+A +G + G IH A++ G+ GD V
Sbjct: 278 NGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSV 337
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
A +L+ MYSKCG +E A+ F + ++ V W+++IA Y G +EA+S++ +M
Sbjct: 338 ATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHI 397
Query: 309 KIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARH 368
K + T++ V++ C +A+ K H ++ S++ TA++ Y+K GR A
Sbjct: 398 KPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALK 457
Query: 369 VFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGL 428
F+R+ K+ +++NAL GY G +A +++ M V P+ T + +L C++
Sbjct: 458 AFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSD 517
Query: 429 SERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALL 488
RG Y H +I + + L A L + FE + W ++
Sbjct: 518 YARG-SCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Query: 489 TACRMHGNLE--LGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKL 531
+HG E + F K+ + P N V +NI ++ +L
Sbjct: 577 NGYLLHGQAEEAVATFRQMKVEKFQP----NAVTFVNIVRAAAEL 617
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 158/315 (50%), Gaps = 11/315 (3%)
Query: 124 RSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD-ARKLFGDMPERDVVSWMTV 182
++ R + +V +I SG +P ++N L + D +R +F + + VV W ++
Sbjct: 16 KNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQ-----DLSRVIFDSVRDPGVVLWNSM 70
Query: 183 IGGLVDSGDYSEAFGLFLFMWVEFN-DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMG 241
I G +G + EA G F +M E D +F ++A AG + G +IH +MG
Sbjct: 71 IRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMG 130
Query: 242 VGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYL 301
+ D ++ AL++MY K + A+ FD+M K V WN++++G A +G S AL ++
Sbjct: 131 LESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFH 190
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA-NTALVDFYSKW 360
+MR IDH ++ +I +L + + H +++ GF I A ++ L+D Y
Sbjct: 191 DMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNC 247
Query: 361 GRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVL 420
+ A VF+ + RK+ SW ++A Y ++G E+ +++F+ M V N V + L
Sbjct: 248 ADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASAL 307
Query: 421 SACSYSGLSERGWEI 435
A +Y G +G I
Sbjct: 308 QAAAYVGDLVKGIAI 322
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 250/485 (51%), Gaps = 16/485 (3%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY ++N C L S K + +I S DL + N +L M+ CG M +A +FG +
Sbjct: 302 TYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI 361
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR--SRTFATMVRASAGLGLIQV 229
++VSW ++I G ++G + E L + + R TF+ + A+A
Sbjct: 362 HNPNLVSWNSIISGCSENG-FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVH 420
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
G+ +H K+G FV L+ MY K E AQ FD M E+ V W +I G++
Sbjct: 421 GKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSR 480
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
G SE A+ ++EM + D F++S VI C +A L + H +R GF +
Sbjct: 481 LGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSV 540
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
ALVD Y K G+ E A +F ++ WN+++ Y HG E+A+ FEQ+L
Sbjct: 541 CGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGF 600
Query: 410 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 469
+P+ VT+L++L+ACS+ G + +G + ++ ++ +K HY+CM+ L+ + GL+DEA
Sbjct: 601 MPDAVTYLSLLAACSHRGSTLQG-KFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEAL 659
Query: 470 ALIRRAPFEPTKN---MWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYN 526
LI ++P P N +W LL+AC NL++G +AAE++ ++DP +++L N+Y
Sbjct: 660 ELIEQSP--PGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYA 717
Query: 527 SSGKLKEAAGVLQTLKRKGLRMLPTCTWIEV-KKQPHAFLCGDKSHTQTKEIYQKVDEIL 585
+G+ ++ A + + ++ P +WIEV F GD+S+ + V +
Sbjct: 718 VNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEV------VSQAQ 771
Query: 586 DEISR 590
DE++R
Sbjct: 772 DELNR 776
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 171/320 (53%), Gaps = 5/320 (1%)
Query: 110 ASTYDALVNVCVGLRSIRGVKKVFNYMISSGF---EPDLYMMNRVLLMHVKCGLMLDARK 166
AS+ L CV + ++ +++ ++++G Y N ++ M+V+CG + ARK
Sbjct: 94 ASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARK 153
Query: 167 LFGDMPERDVVSWMTVIGGLVDSGDY-SEAFGLFLFMWVEFNDGRSRTFATMVRASAGLG 225
+F MP R+VVS+ + + D+ S AF L M E+ S TF ++V+ A L
Sbjct: 154 VFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLE 213
Query: 226 LIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIA 285
+ +G ++S +K+G + V +++ MYS CG +E A+ FD + + V WN++I
Sbjct: 214 DVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIV 273
Query: 286 GYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGS 345
G + E+ L + M SG FT SIV+ C +L S K HA ++ +
Sbjct: 274 GSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA 333
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
D+ + AL+D Y G M +A +VF R+H N++SWN++I+G +G GEQA+ M+ ++L
Sbjct: 334 DLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLL 393
Query: 406 RERVI-PNHVTFLAVLSACS 424
R P+ TF A +SA +
Sbjct: 394 RMSTPRPDEYTFSAAISATA 413
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 179/375 (47%), Gaps = 12/375 (3%)
Query: 146 YMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSW--MTVIGGLVDSGD--YSEAFGLFLF 201
Y N ++ M+V+C + ARK+F MP+R++V+ ++ + V G +S+ L F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 202 MWVEFN--DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDS---FVACALIDMY 256
+ F + + + + R + +++ RQIH+ L G G + + LI MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 257 SKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH-GYSEEALSIYLEMRDSGAKIDHFTI 315
+CGS+E A+ FD+MP + V +N++ + Y+ + ++ A + M K + T
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 316 SIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHR 375
+ ++++C L + ++ +++ G+ ++V T+++ YS G +E AR +FD ++
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 376 KNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
++ ++WN +I G + + E + F ML V P T+ VL+ CS G G I
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 436 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHG 495
+ + + A ++++ G + EAF + R P W ++++ C +G
Sbjct: 323 HARIIVSDSLADLPLDNA-LLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSENG 380
Query: 496 NLELGKFAAEKLYEM 510
E +L M
Sbjct: 381 FGEQAMLMYRRLLRM 395
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 245/496 (49%), Gaps = 36/496 (7%)
Query: 125 SIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIG 184
+++ +K+ YMI +G D + + + G + A +F P + T+I
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 185 GLV---DSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMG 241
L + +S A ++ +W + TF +++ + + + GRQIH + G
Sbjct: 87 ALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG 146
Query: 242 VGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK-------------------------- 275
V LI MY CG + DA+ FD+M K
Sbjct: 147 FDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLE 206
Query: 276 -------TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
V W +I+GYA G + EA+ ++ M + D T+ V+ C L SL
Sbjct: 207 MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL 266
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
E ++ + + G + N A++D Y+K G + A VF+ ++ +NV++W +IAG
Sbjct: 267 ELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGL 326
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 448
HG G +A+ MF +M++ V PN VTF+A+LSACS+ G + G +F SM + + P
Sbjct: 327 ATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Query: 449 AMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLY 508
HY CMI+LLGR G L EA +I+ PF+ +W +LL A +H +LELG+ A +L
Sbjct: 387 IEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELI 446
Query: 509 EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGD 568
+++P NY++L N+Y++ G+ E+ + +K G++ + + IEV+ + + F+ GD
Sbjct: 447 KLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGD 506
Query: 569 KSHTQTKEIYQKVDEI 584
+H Q + I++ + E+
Sbjct: 507 LTHPQVERIHEILQEM 522
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 169/374 (45%), Gaps = 40/374 (10%)
Query: 71 PSTPGLCSQIEKLGLC---NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIR 127
P+T + I L L N H A+ ++ +L CA T+ ++ + V + +
Sbjct: 76 PNTYLHNTMIRALSLLDEPNAHSIAITVYR--KLWALCAKPDTFTFPFVLKIAVRVSDVW 133
Query: 128 GVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDV----------- 176
+++ ++ GF+ ++++ ++ M+ CG + DARK+F +M +DV
Sbjct: 134 FGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYG 193
Query: 177 ----------------------VSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTF 214
VSW VI G SG SEA +F M +E + T
Sbjct: 194 KVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTL 253
Query: 215 ATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE 274
++ A A LG +++G +I S G+ + A+IDMY+K G+I A F+ + E
Sbjct: 254 LAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE 313
Query: 275 KTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQA 334
+ V W +IIAG A HG+ EAL+++ M +G + + T ++ C + ++ K+
Sbjct: 314 RNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRL 373
Query: 335 HAAL-VRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHG 392
++ ++G +I ++D + G++ +A V M + N W +L+A H
Sbjct: 374 FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHH 433
Query: 393 QGEQAIQMFEQMLR 406
E + ++++
Sbjct: 434 DLELGERALSELIK 447
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 211/374 (56%), Gaps = 7/374 (1%)
Query: 215 ATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE 274
T++ A A LG + R++ K V V A+I Y + G ++ A FD MP
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVP----VWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 275 KTTVGWNSIIAGYALHGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQ 333
K W ++I+G++ +G EAL ++L M +D K +H T+ V+ C L LE ++
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 334 AHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHG 392
+GF +I A ++ YSK G ++ A+ +F+ + +++N+ SWN++I HG
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 393 QGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 452
+ ++A+ +F QMLRE P+ VTF+ +L AC + G+ +G E+F SM HK+ P+ HY
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY 356
Query: 453 ACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDP 512
CMI+LLGR G L EA+ LI+ P +P +W LL AC HGN+E+ + A+E L++++P
Sbjct: 357 GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEP 416
Query: 513 GKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTW-IEVKKQPHAFLCGDKSH 571
N V++ NIY ++ K + + +K++ + ++ +EV H F DKSH
Sbjct: 417 TNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSH 476
Query: 572 TQTKEIYQKVDEIL 585
++ EIYQ ++EI
Sbjct: 477 PRSYEIYQVLEEIF 490
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 144/287 (50%), Gaps = 8/287 (2%)
Query: 115 ALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER 174
L+ L ++ ++VF+ M D+ + N ++ + + G M A +LF MP +
Sbjct: 122 TLITAYAKLGALCCARRVFDEMSKR----DVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 175 DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR-TFATMVRASAGLGLIQVGRQI 233
+V SW TVI G +G+YSEA +FL M + + + T +++ A A LG +++GR++
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 234 HSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM-PEKTTVGWNSIIAGYALHGY 292
A + G + +V A I+MYSKCG I+ A+ F+++ ++ WNS+I A HG
Sbjct: 238 EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 297
Query: 293 SEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR-HGFGSDIVANT 351
+EAL+++ +M G K D T ++ CV + ++ ++ H +
Sbjct: 298 HDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYG 357
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRK-NVISWNALIAGYGNHGQGEQA 397
++D + G++++A + M K + + W L+ HG E A
Sbjct: 358 CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 17/320 (5%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
+Q+H+ L+ GV L+ ++ A+ FD T +N +I Y +H
Sbjct: 5 KQLHAHCLRTGVDETK----DLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
E++ +Y + G + H T + + +S + H+ R GF SD
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 351 TALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI 410
T L+ Y+K G + AR VFD M +++V WNA+I GY G + A+++F+ M R+ V
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV- 179
Query: 411 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD---- 466
++ V+S S +G ++F M +D VKP + ++ G L+
Sbjct: 180 ---TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 467 -EAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIY 525
E +A R F + A + G +++ K E+L + LC++ ++
Sbjct: 237 LEGYA--RENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL--GNQRNLCSWNSMIGSL 292
Query: 526 NSSGKLKEAAGVLQTLKRKG 545
+ GK EA + + R+G
Sbjct: 293 ATHGKHDEALTLFAQMLREG 312
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 16/217 (7%)
Query: 89 HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMM 148
+ EA+++F +E + T +++ C L + +++ Y +GF ++Y+
Sbjct: 195 YSEALKMFLCME-KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVC 253
Query: 149 NRVLLMHVKCGLMLDARKLFGDM-PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
N + M+ KCG++ A++LF ++ +R++ SW ++IG L G + EA LF M E
Sbjct: 254 NATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGE 313
Query: 208 DGRSRTFATMVRASAGLGLIQVGR-------QIHSCALKMGVGGDSFVACALIDMYSKCG 260
+ TF ++ A G++ G+ ++H + K+ G +ID+ + G
Sbjct: 314 KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYG------CMIDLLGRVG 367
Query: 261 SIEDAQCAFDQMPEKT-TVGWNSIIAGYALHGYSEEA 296
+++A MP K V W +++ + HG E A
Sbjct: 368 KLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 216/390 (55%), Gaps = 2/390 (0%)
Query: 167 LFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF-NDGRSRTFATMVRASAGLG 225
+F MP R++ SW +IG SG S++ LFL MW E T ++RA +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 226 LIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIA 285
+ G IH LK+G FV+ AL+ MY G + A+ FD MP + +V + ++
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 286 GYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGS 345
GY G + L+++ EM SG +D + ++ C +L +L+H K H +R
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
+ A+ D Y K ++ A VF M R++VISW++LI GYG G + ++F++ML
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML 328
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
+E + PN VTFL VLSAC++ GL E+ W +++ + +++ + P HYA + + + R GLL
Sbjct: 329 KEGIEPNAVTFLGVLSACAHGGLVEKSW-LYFRLMQEYNIVPELKHYASVADCMSRAGLL 387
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIY 525
+EA + P +P + + A+L+ C+++GN+E+G+ A +L ++ P K YV L +Y
Sbjct: 388 EEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLY 447
Query: 526 NSSGKLKEAAGVLQTLKRKGLRMLPTCTWI 555
+++G+ EA + Q +K K + +P C+ I
Sbjct: 448 SAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 138/315 (43%), Gaps = 5/315 (1%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T ++ C R + + + GF L++ + +++M+V G +L ARKLF DM
Sbjct: 136 TLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM 195
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
P RD V + + GG V G+ +F M S +++ A LG ++ G+
Sbjct: 196 PVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGK 255
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
+H ++ + A+ DMY KC ++ A F M + + W+S+I GY L G
Sbjct: 256 SVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDG 315
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
+ ++ EM G + + T V+ C +E + + + ++
Sbjct: 316 DVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYA 375
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRK-NVISWNALIAG---YGNHGQGEQAIQMFEQMLRE 407
++ D S+ G +E+A + M K + A+++G YGN GE+ + Q L+
Sbjct: 376 SVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQ-LKP 434
Query: 408 RVIPNHVTFLAVLSA 422
R +VT + SA
Sbjct: 435 RKASYYVTLAGLYSA 449
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 251/502 (50%), Gaps = 47/502 (9%)
Query: 88 RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
R +E++ +++ + +G AD TY +++ C L + V + S +LY+
Sbjct: 164 RFQESVSVYKRMMSKGIRAD--EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
N ++ M+ + G + AR+LF M ERD VSW +I EAF L M++
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 208 DGRSRTFATM-----------------------------------VRASAGLGLIQVGRQ 232
+ T+ T+ ++A + +G ++ G+
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 233 IH-----SCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
H SC+ + V +LI MYS+C + A F Q+ + WNSII+G+
Sbjct: 342 FHCLVIRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD- 346
A + SEE + EM SG +H T++ ++ + R+ +L+H K+ H ++R D
Sbjct: 399 AYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
++ +LVD Y+K G + A+ VFD M +++ +++ +LI GYG G+GE A+ F+ M R
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 407 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 466
+ P+HVT +AVLSACS+S L G +F M ++ R HY+CM++L R G LD
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 467 EAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEK-LYEMDPGKLCNYVMLLNIY 525
+A + P+EP+ M LL AC +HGN +G++AA+K L E P L +Y++L ++Y
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMY 638
Query: 526 NSSGKLKEAAGVLQTLKRKGLR 547
+G + V L G++
Sbjct: 639 AVTGSWSKLVTVKTLLSDLGVQ 660
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/530 (21%), Positives = 217/530 (40%), Gaps = 85/530 (16%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA F +L + + + +L++ CVG +++ + ISSG E D ++ +
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ + L+ +A+ + + + W +IG + + + E+ ++ M +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
T+ ++++A A L GR +H + +V ALI MY + G ++ A+ FD
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 271 QMPEKTTVGWNSIIAGYA----------------LHGYSEE------------------- 295
+M E+ V WN+II Y L G
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 296 ALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH-GFGSDI-VANTAL 353
AL+ + MR+ +I + ++ C + +L+ K H ++R F DI +L
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 354 VDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNH 413
+ YS+ + A VF ++ ++ +WN++I+G+ + + E+ + ++ML PNH
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 414 VTFLAVLSACSYSGLSERGWE------------------------------------IFY 437
+T ++L + G + G E +F
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Query: 438 SMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR---RAPFEPTKNMWVALLTACRMH 494
SM + KV Y +I+ GR G + A A + R+ +P VA+L+AC
Sbjct: 484 SMRKRDKVT-----YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 495 GNLELGKFAAEKLYEMDPG---KLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
+ G + K+ E G +L +Y ++++Y +G L +A + T+
Sbjct: 539 NLVREGHWLFTKM-EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 114/245 (46%), Gaps = 6/245 (2%)
Query: 187 VDSGDYSEAFGLFLFMWVEFNDGRSR----TFATMVRASAGLGLIQVGRQIHSCALKMGV 242
+ G EAF F + + G + A+++ G G+Q+H+ + G+
Sbjct: 57 ISHGQLYEAFRTFSLL--RYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGL 114
Query: 243 GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLE 302
DS + L+ YS +++AQ + + WN +I Y + +E++S+Y
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
M G + D FT VI+ C L + + H ++ ++ AL+ Y ++G+
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
++ AR +FDRM ++ +SWNA+I Y + + +A ++ ++M V + VT+ +
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 423 CSYSG 427
C +G
Sbjct: 295 CLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 251/502 (50%), Gaps = 47/502 (9%)
Query: 88 RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
R +E++ +++ + +G AD TY +++ C L + V + S +LY+
Sbjct: 164 RFQESVSVYKRMMSKGIRAD--EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
N ++ M+ + G + AR+LF M ERD VSW +I EAF L M++
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 208 DGRSRTFATM-----------------------------------VRASAGLGLIQVGRQ 232
+ T+ T+ ++A + +G ++ G+
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 233 IH-----SCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
H SC+ + V +LI MYS+C + A F Q+ + WNSII+G+
Sbjct: 342 FHCLVIRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD- 346
A + SEE + EM SG +H T++ ++ + R+ +L+H K+ H ++R D
Sbjct: 399 AYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
++ +LVD Y+K G + A+ VFD M +++ +++ +LI GYG G+GE A+ F+ M R
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 407 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 466
+ P+HVT +AVLSACS+S L G +F M ++ R HY+CM++L R G LD
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 467 EAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEK-LYEMDPGKLCNYVMLLNIY 525
+A + P+EP+ M LL AC +HGN +G++AA+K L E P L +Y++L ++Y
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMY 638
Query: 526 NSSGKLKEAAGVLQTLKRKGLR 547
+G + V L G++
Sbjct: 639 AVTGSWSKLVTVKTLLSDLGVQ 660
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/530 (21%), Positives = 217/530 (40%), Gaps = 85/530 (16%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA F +L + + + +L++ CVG +++ + ISSG E D ++ +
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ + L+ +A+ + + + W +IG + + + E+ ++ M +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
T+ ++++A A L GR +H + +V ALI MY + G ++ A+ FD
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 271 QMPEKTTVGWNSIIAGYA----------------LHGYSEE------------------- 295
+M E+ V WN+II Y L G
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 296 ALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH-GFGSDI-VANTAL 353
AL+ + MR+ +I + ++ C + +L+ K H ++R F DI +L
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 354 VDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNH 413
+ YS+ + A VF ++ ++ +WN++I+G+ + + E+ + ++ML PNH
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 414 VTFLAVLSACSYSGLSERGWE------------------------------------IFY 437
+T ++L + G + G E +F
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Query: 438 SMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR---RAPFEPTKNMWVALLTACRMH 494
SM + KV Y +I+ GR G + A A + R+ +P VA+L+AC
Sbjct: 484 SMRKRDKVT-----YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 495 GNLELGKFAAEKLYEMDPG---KLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
+ G + K+ E G +L +Y ++++Y +G L +A + T+
Sbjct: 539 NLVREGHWLFTKM-EHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 114/245 (46%), Gaps = 6/245 (2%)
Query: 187 VDSGDYSEAFGLFLFMWVEFNDGRSR----TFATMVRASAGLGLIQVGRQIHSCALKMGV 242
+ G EAF F + + G + A+++ G G+Q+H+ + G+
Sbjct: 57 ISHGQLYEAFRTFSLL--RYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGL 114
Query: 243 GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLE 302
DS + L+ YS +++AQ + + WN +I Y + +E++S+Y
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
M G + D FT VI+ C L + + H ++ ++ AL+ Y ++G+
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
++ AR +FDRM ++ +SWNA+I Y + + +A ++ ++M V + VT+ +
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 423 CSYSG 427
C +G
Sbjct: 295 CLEAG 299
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 218/415 (52%), Gaps = 3/415 (0%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD---MPERDVVSWMTVIGGLVDSGDY 192
++ SG E + ++ ++ M+ CG ++ A +F V W +++ G + + +
Sbjct: 264 VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 193 SEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACAL 252
A L L ++ S T + ++ +++G Q+HS + G D V L
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSIL 383
Query: 253 IDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDH 312
+D+++ G+I+DA F ++P K + ++ +I G G++ A ++ E+ G D
Sbjct: 384 VDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQ 443
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
F +S ++++C LASL KQ H ++ G+ S+ V TALVD Y K G +++ +FD
Sbjct: 444 FIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDG 503
Query: 373 MHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG 432
M ++V+SW +I G+G +G+ E+A + F +M+ + PN VTFL +LSAC +SGL E
Sbjct: 504 MLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEA 563
Query: 433 WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACR 492
+M ++ ++P HY C+++LLG+ GL EA LI + P EP K +W +LLTAC
Sbjct: 564 RSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACG 623
Query: 493 MHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
H N L AEKL + P Y L N Y + G + + V + K+ G +
Sbjct: 624 THKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAK 678
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 224/489 (45%), Gaps = 65/489 (13%)
Query: 105 CADVGASTYDALVNVCVGLRSIRGVKKVFNYMI------------SSGFE----PDLYMM 148
C VG LV +G ++RG + N ++ +S F+ P
Sbjct: 117 CGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSW 176
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
N ++ + K GLM +A LF MP+ +VVSW +I G VD G A + M E
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLV 235
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
++A + GL+ +G+Q+H C +K G+ F ALIDMYS CGS+ A
Sbjct: 236 LDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADV 295
Query: 269 FDQMPEKTTVG-----WNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
F Q EK V WNS+++G+ ++ +E AL + L++ S D +T+S ++IC+
Sbjct: 296 FHQ--EKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICI 353
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
+L Q H+ +V G+ D + + LVD ++ G ++DA +F R+ K++I+++
Sbjct: 354 NYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG 413
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW--EIF-YSMS 440
LI G G A +F ++++ + + +L C S L+ GW +I +
Sbjct: 414 LIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVC--SSLASLGWGKQIHGLCIK 471
Query: 441 RDHKVKPRA------MHYAC-----------------------MIELLGREGLLDEAFAL 471
+ ++ +P M+ C +I G+ G ++EAF
Sbjct: 472 KGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRY 531
Query: 472 IRR---APFEPTKNMWVALLTACRMHGNLELGKFAAEKL---YEMDPGKLCNYVMLLNIY 525
+ EP K ++ LL+ACR G LE + E + Y ++P L +Y ++++
Sbjct: 532 FHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEP-YLEHYYCVVDLL 590
Query: 526 NSSGKLKEA 534
+G +EA
Sbjct: 591 GQAGLFQEA 599
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 154/325 (47%), Gaps = 5/325 (1%)
Query: 85 LCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPD 144
L N EA L+ +L++ + T + +C+ ++R +V + ++ SG+E D
Sbjct: 318 LINEENEA-ALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELD 376
Query: 145 LYMMNRVLL-MHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
Y++ +L+ +H G + DA KLF +P +D++++ +I G V SG S AF LF +
Sbjct: 377 -YIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 204 VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIE 263
D + +++ + L + G+QIH +K G + A AL+DMY KCG I+
Sbjct: 436 KLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEID 495
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
+ FD M E+ V W II G+ +G EEA + +M + G + + T ++ C
Sbjct: 496 NGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACR 555
Query: 324 RLASLEHAKQAHAAL-VRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH-RKNVISW 381
LE A+ + +G + +VD + G ++A + ++M + W
Sbjct: 556 HSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIW 615
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLR 406
+L+ G H + E++L+
Sbjct: 616 TSLLTACGTHKNAGLVTVIAEKLLK 640
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 159/338 (47%), Gaps = 34/338 (10%)
Query: 120 CVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSW 179
C +++ + + + ++I G ++++ N V+ M+V L+ DA K+F +M ER++V+W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 180 MTVIGGLVDSGDYSEAFGLFLFMW-VEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCAL 238
T++ G G ++A L+ M E ++ +++A +G IQ+G ++
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 239 KMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALS 298
K + GD + +++DMY K G + +A +F ++ ++ WN++I+GY G +EA++
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 299 IY------------------------------LEMRDSGAKIDHFTISIVIRICVRLASL 328
++ + M+ G +D F + ++ C L
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH---RKNVISWNALI 385
KQ H +V+ G S A +AL+D YS G + A VF + +V WN+++
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 386 AGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSAC 423
+G+ + + E A+ + Q+ + + + T L C
Sbjct: 315 SGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKIC 352
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 30/285 (10%)
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
G I + +K G+ + F+A +I MY + DA FD+M E+ V W ++++GY
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 290 HGYSEEALSIYLEMRDSGAK-IDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
G +A+ +Y M DS + + F S V++ C + ++ + + + D+V
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
++VD Y K GR+ +A F + R + SWN LI+GY G ++A+ +F +M +
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQ-- 201
Query: 409 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
PN V++ C SG ++G PRA+ + ++ REGL+ +
Sbjct: 202 --PNVVSW-----NCLISGFVDKG-------------SPRALEFLVRMQ---REGLVLDG 238
Query: 469 FAL---IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM 510
FAL ++ F M L C + LE FA L +M
Sbjct: 239 FALPCGLKACSFGGLLTMG-KQLHCCVVKSGLESSPFAISALIDM 282
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 310 IDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHV 369
+D I+ +R C ++ + + + A +++ G ++ ++ Y + + DA V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 370 FDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML-RERVIPNHVTFLAVLSACSYSGL 428
FD M +N+++W +++GY + G+ +AI+++ +ML E N + AVL AC G
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 429 SERGWEIFYSMSRDHK------------------------------VKPRAMHYACMIEL 458
+ G ++ + +++ ++P + + +I
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 459 LGREGLLDEAFALIRRAPFEPTKNMWVALLTA 490
+ GL+DEA L R P +P W L++
Sbjct: 183 YCKAGLMDEAVTLFHRMP-QPNVVSWNCLISG 213
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 268/530 (50%), Gaps = 38/530 (7%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFE-PDLYMMN 149
+A +LF L +GD + + T +++ VC L + K++ +Y++ + D + N
Sbjct: 312 KAFQLFHNLVHKGDVSP-DSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGN 370
Query: 150 RVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDG 209
++ + + G A F M +D++SW ++ DS + L + E
Sbjct: 371 ALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITL 430
Query: 210 RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDS---FVACALIDMYSKCGSIEDAQ 266
S T ++++ + I +++H ++K G+ D + AL+D Y+KCG++E A
Sbjct: 431 DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAH 490
Query: 267 CAFDQMPEK-TTVGWNSIIAGYALHG--------------------------YSE----- 294
F + E+ T V +NS+++GY G Y+E
Sbjct: 491 KIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPN 550
Query: 295 EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALV 354
EA+ ++ E++ G + + TI ++ +C +LASL +Q H ++R G G DI L+
Sbjct: 551 EAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLL 609
Query: 355 DFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHV 414
D Y+K G ++ A VF R++++ + A++AGY HG+G++A+ ++ M + P+HV
Sbjct: 610 DVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHV 669
Query: 415 TFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
+L+AC ++GL + G +I+ S+ H +KP YAC ++L+ R G LD+A++ + +
Sbjct: 670 FITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQ 729
Query: 475 APFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEA 534
P EP N+W LL AC + ++LG A L + + N+V++ N+Y + K +
Sbjct: 730 MPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGV 789
Query: 535 AGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEI 584
+ +K+K ++ C+W+EV Q + F+ GD SH + I+ V+ +
Sbjct: 790 MELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNAL 839
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 235/500 (47%), Gaps = 32/500 (6%)
Query: 90 REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMN 149
RE M F+ + D + T+ ++ +CV L K + +Y+I +G E D + N
Sbjct: 103 RETMRFFKAMHF-ADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGN 161
Query: 150 RVLLMHVKCGLML-DARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
++ M+ K G + DA F + ++DVVSW +I G ++ ++AF F M E +
Sbjct: 162 ALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTE 221
Query: 209 GRSRTFATMVRASAGLG---LIQVGRQIHSCALKMG-VGGDSFVACALIDMYSKCGSIED 264
T A ++ A + + GRQIHS ++ + FV +L+ Y + G IE+
Sbjct: 222 PNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEE 281
Query: 265 AQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSG-AKIDHFTISIVIRICV 323
A F +M K V WN +IAGYA + +A ++ + G D TI ++ +C
Sbjct: 282 AASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCA 341
Query: 324 RLASLEHAKQAHAALVRHGFG-SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWN 382
+L L K+ H+ ++RH + D AL+ FY+++G A F M K++ISWN
Sbjct: 342 QLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWN 401
Query: 383 ALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSAC-SYSGLSE----RGWEIFY 437
A++ + + + Q + + +L E + + VT L++L C + G+ + G+ +
Sbjct: 402 AILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKA 461
Query: 438 SMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNL 497
+ D + +P+ + +++ + G ++ A + T + +LL+ G+
Sbjct: 462 GLLHDEE-EPKLGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSH 518
Query: 498 ELGKFAAEKLY-EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR--------M 548
+ A+ L+ EM L + +++ IY S EA GV + ++ +G+R +
Sbjct: 519 D----DAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNL 574
Query: 549 LPTCTW---IEVKKQPHAFL 565
LP C + + +Q H ++
Sbjct: 575 LPVCAQLASLHLVRQCHGYI 594
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 151/284 (53%), Gaps = 14/284 (4%)
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGL-VDSGDYSEAFGLFLFMWVEFND- 208
VL M+ KC M D +K+F M D V W V+ GL V G + F F + F D
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRF----FKAMHFADE 117
Query: 209 --GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSI-EDA 265
S TFA ++ LG G+ +HS +K G+ D+ V AL+ MY+K G I DA
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDA 177
Query: 266 QCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRL 325
AFD + +K V WN+IIAG++ + +A + M + ++ TI+ V+ +C +
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 326 ---ASLEHAKQAHAALV-RHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISW 381
+ +Q H+ +V R + + +LV FY + GR+E+A +F RM K+++SW
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRE-RVIPNHVTFLAVLSACS 424
N +IAGY ++ + +A Q+F ++ + V P+ VT +++L C+
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCA 341
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 3/215 (1%)
Query: 212 RTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQ 271
R F +V+A A + + GR +H C K+G S V+ ++++MY+KC ++D Q F Q
Sbjct: 22 RVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQ 81
Query: 272 MPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSG-AKIDHFTISIVIRICVRLASLEH 330
M V WN ++ G ++ E + + M + K T +IV+ +CVRL +
Sbjct: 82 MDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYN 140
Query: 331 AKQAHAALVRHGFGSDIVANTALVDFYSKWGRM-EDARHVFDRMHRKNVISWNALIAGYG 389
K H+ +++ G D + ALV Y+K+G + DA FD + K+V+SWNA+IAG+
Sbjct: 141 GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFS 200
Query: 390 NHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS 424
+ A + F ML+E PN+ T VL C+
Sbjct: 201 ENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 147/385 (38%), Gaps = 63/385 (16%)
Query: 306 SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMED 365
SG DH V++ C ++ L + H + + G + + ++++ Y+K RM+D
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 366 ARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM-LRERVIPNHVTFLAVLSAC- 423
+ +F +M + + WN ++ G + G + ++ F+ M + P+ VTF VL C
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGL-SVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCV 133
Query: 424 ----SYSGLSERGWEIFYSMSRDHKVK--------------PRA------------MHYA 453
SY+G S + I + +D V P A + +
Sbjct: 134 RLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWN 193
Query: 454 CMIELLGREGLLDEA---FALIRRAPFEPTKNMWVALLTAC-RMHGNL------ELGKFA 503
+I ++ +A F L+ + P EP +L C M N+ ++ +
Sbjct: 194 AIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYV 253
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL--------RMLPTCTWI 555
++ + +CN L++ Y G+++EAA + + K L C W
Sbjct: 254 VQRSWLQTHVFVCN--SLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWF 311
Query: 556 EVKKQPHAFL-CGDKSHTQTKEIY-----QKVDEILDEISRHGYIKENEMLLPDVDEEEQ 609
+ + H + GD S I ++ ++ H YI + LL D
Sbjct: 312 KAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNA 371
Query: 610 RLQQY----HSEKLAIAFGLINTPD 630
+ Y + AF L++T D
Sbjct: 372 LISFYARFGDTSAAYWAFSLMSTKD 396
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 198/385 (51%), Gaps = 32/385 (8%)
Query: 301 LEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKW 360
+E+ D GA D ++ C L SLEH+K+ H ++ F D N ++ + +
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 361 GRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVL 420
+ DA+ VFD M K++ SW+ ++ Y ++G G+ A+ +FE+M + + PN TFL V
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 421 SACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPT 480
AC+ G E + F SM +H + P+ HY ++ +LG+ G L EA IR PFEPT
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 481 KNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQT 540
+ W A+ R+HG+++L + E + ++DP K V+
Sbjct: 405 ADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSK---------------------AVINK 443
Query: 541 LKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEML 600
+ + + K + F + KE+ K + Y+ + +
Sbjct: 444 IPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVV--------YVPDTRFV 495
Query: 601 LPDVDEE--EQRLQQYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTG 658
L D+D+E EQ L YHSE+LAIA+G+I TP L I + RVCGDCHN IK+++ + G
Sbjct: 496 LHDIDQEAKEQAL-LYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIG 554
Query: 659 REIVVRDASRFHHFRNATCSCGDYW 683
R ++VRD RFHHF++ CSCGDYW
Sbjct: 555 RVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 10/215 (4%)
Query: 81 EKLGLCNR--HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMIS 138
E + LC R +++A+EL + +G D + L C L+S+ KKV ++ +
Sbjct: 211 EVMRLCQRRLYKDAIELLD----KGAMPD--RECFVLLFESCANLKSLEHSKKVHDHFLQ 264
Query: 139 SGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGL 198
S F D + N V+ M +C + DA+++F M ++D+ SW ++ D+G +A L
Sbjct: 265 SKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHL 324
Query: 199 FLFMWVEFNDGRSRTFATMVRASAGLGLIQVG-RQIHSCALKMGVGGDSFVACALIDMYS 257
F M TF T+ A A +G I+ S + G+ + ++ +
Sbjct: 325 FEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLG 384
Query: 258 KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA-LHG 291
KCG + +A+ +P + T + + YA LHG
Sbjct: 385 KCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 58/118 (49%)
Query: 214 FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP 273
F + + A L ++ +++H L+ GD + +I M+ +C SI DA+ FD M
Sbjct: 239 FVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMV 298
Query: 274 EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA 331
+K W+ ++ Y+ +G ++AL ++ EM G K + T V C + +E A
Sbjct: 299 DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEA 356
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/437 (32%), Positives = 226/437 (51%), Gaps = 13/437 (2%)
Query: 122 GLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMT 181
GLR I G+ I SG D + ++ + K GL+++A KLF +P+ D+ W
Sbjct: 124 GLRCIHGIA------IVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 182 VIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGL---GLIQVGRQIHSCAL 238
+I G G + + LF M + G TMV ++GL L+ V +H+ L
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQ---HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCL 234
Query: 239 KMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALS 298
K+ + S+V CAL++MYS+C I A F+ + E V +S+I GY+ G +EAL
Sbjct: 235 KINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALH 294
Query: 299 IYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYS 358
++ E+R SG K D ++IV+ C L+ K+ H+ ++R G DI +AL+D YS
Sbjct: 295 LFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYS 354
Query: 359 KWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLA 418
K G ++ A +F + KN++S+N+LI G G HG A + F ++L +IP+ +TF A
Sbjct: 355 KCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSA 414
Query: 419 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE 478
+L C +SGL +G EIF M + ++P+ HY M++L+G G L+EAF +
Sbjct: 415 LLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKP 474
Query: 479 PTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNY-VMLLNIYNSSGKLKEAAGV 537
+ ALL+ C +H N L + AE +++ + Y VML N+Y G+ E +
Sbjct: 475 IDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERL 534
Query: 538 LQTLKRKGLRMLPTCTW 554
+ LP +W
Sbjct: 535 RDGISESYGGKLPGISW 551
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 120/526 (22%), Positives = 222/526 (42%), Gaps = 57/526 (10%)
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVD 188
+K+ +++ S D Y ++ + ++ ARKLF PER V W ++I
Sbjct: 24 TQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAK 83
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV 248
+ ++ LF + + T+A + R + + R IH A+ G+G D
Sbjct: 84 AHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQIC 143
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
A++ YSK G I +A F +P+ WN +I GY G+ ++ ++++ M+ G
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH 203
Query: 309 KIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARH 368
+ + +T+ + + + L A HA ++ S ALV+ YS+ + A
Sbjct: 204 QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACS 263
Query: 369 VFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSAC----- 423
VF+ + ++++ ++LI GY G ++A+ +F ++ P+ V VL +C
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 424 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAP------- 476
S SG + I + D KV + +I++ + GLL A +L P
Sbjct: 324 SVSGKEVHSYVIRLGLELDIKV------CSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 477 ----------------FE-----------PTKNMWVALLTACRMHGNLELGKFAAEKL-- 507
FE P + + ALL C G L G+ E++
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKS 437
Query: 508 -YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK----GLRMLPTCTWIEVKKQPH 562
+ ++P + +YV ++ + +GKL+EA + +L++ L L +C EV + H
Sbjct: 438 EFGIEP-QTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCC--EVHENTH 494
Query: 563 -AFLCGDKSHTQTKEIYQKVDEILDEI-SRHGYIKENEMLLPDVDE 606
A + + H +E +L + +R+G E E L + E
Sbjct: 495 LAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISE 540
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 67 QIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEG---DCADVGASTYDALVNVCVGL 123
I +P S I C H+EA+ LF L + G DC V ++ C L
Sbjct: 267 SISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI-----VLGSCAEL 321
Query: 124 RSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVI 183
K+V +Y+I G E D+ + + ++ M+ KCGL+ A LF +PE+++VS+ ++I
Sbjct: 322 SDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLI 381
Query: 184 GGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQI 233
GL G S AF F + TF+ ++ GL+ G++I
Sbjct: 382 LGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 206/374 (55%), Gaps = 6/374 (1%)
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
TF +++A A + GRQI LK G D +V LI +Y C DA+ FD+M
Sbjct: 115 TFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEM 174
Query: 273 PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAK 332
E+ V WNSI+ +G + EM D T+ +++ C +L K
Sbjct: 175 TERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGK 232
Query: 333 QAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHG 392
H+ ++ + TALVD Y+K G +E AR VF+RM KNV +W+A+I G +G
Sbjct: 233 LVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYG 292
Query: 393 QGEQAIQMFEQMLRERVI-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMH 451
E+A+Q+F +M++E + PN+VTFL VL ACS++GL + G++ F+ M + HK+KP +H
Sbjct: 293 FAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIH 352
Query: 452 YACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE---LGKFAAEKLY 508
Y M+++LGR G L+EA+ I++ PFEP +W LL+AC +H + + +G+ ++L
Sbjct: 353 YGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLI 412
Query: 509 EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGD 568
E++P + N V++ N + + EAA V + +K ++ + + +E+ H F G
Sbjct: 413 ELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGY 472
Query: 569 KSHTQTKEIYQKVD 582
++ IY+ +D
Sbjct: 473 DPRSEYVSIYELLD 486
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 142/283 (50%), Gaps = 5/283 (1%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ L+ C + +++ ++ GF+ D+Y+ N ++ ++ C DARK+F +M
Sbjct: 115 TFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEM 174
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
ER+VVSW +++ LV++G + F F M + T ++ A G + +G+
Sbjct: 175 TERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGK 232
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
+HS + + + + AL+DMY+K G +E A+ F++M +K W+++I G A +G
Sbjct: 233 LVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYG 292
Query: 292 YSEEALSIYLE-MRDSGAKIDHFTISIVIRICVRLASLEHA-KQAHAALVRHGFGSDIVA 349
++EEAL ++ + M++S + ++ T V+ C ++ K H H ++
Sbjct: 293 FAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIH 352
Query: 350 NTALVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNH 391
A+VD + GR+ +A +M + + W L++ H
Sbjct: 353 YGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 156/353 (44%), Gaps = 42/353 (11%)
Query: 226 LIQVGRQIHSCALKMGVGGDSFVACALIDM--YSKCGSIEDAQCAFDQMPEKTTVGWNSI 283
L+Q+ QIH +L+ DSF+ L+ + S + A+ + T WN +
Sbjct: 29 LLQIHGQIHLSSLQ----NDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNML 84
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
GY+ E++ +Y EM+ G K + T +++ C L +Q +++HGF
Sbjct: 85 SRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGF 144
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQ 403
D+ L+ Y + DAR VFD M +NV+SWN+++ +G+ + F +
Sbjct: 145 DFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCE 204
Query: 404 MLRERVIPNHVTFLAVLSACS---------YSGLSERGWEI------------------- 435
M+ +R P+ T + +LSAC +S + R E+
Sbjct: 205 MIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 436 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL----IRRAPFEPTKNMWVALLTAC 491
+ + + V ++ MI L + G +EA L ++ + P ++ +L AC
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 492 RMHGNLELG-KF--AAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
G ++ G K+ EK++++ P + +Y +++I +G+L EA ++ +
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKP-MMIHYGAMVDILGRAGRLNEAYDFIKKM 376
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 243/468 (51%), Gaps = 15/468 (3%)
Query: 91 EAMELFEI---LELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFE-PDLY 146
E+ LFE+ +ELEG + TY ++ C R + K++ + ++ SG+ +++
Sbjct: 193 ESKRLFEVYLRMELEGVAKN--GLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIF 250
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+ N ++ + CG + + + F +PE+DV+SW +++ D G ++ LF M
Sbjct: 251 VANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWG 310
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSF-VACALIDMYSKCGSIEDA 265
R F + + + IQ G+QIH LKMG S V ALIDMY KC IE++
Sbjct: 311 KRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENS 370
Query: 266 QCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR-ICVR 324
+ +P NS++ G +++ + ++ M D G ID T+S V++ + +
Sbjct: 371 ALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLS 430
Query: 325 LA-SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
L SL H ++ G+ +D+ + +L+D Y+K G+ E +R VFD + N+ +
Sbjct: 431 LPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTS 490
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
+I GY +G G ++M +M R +IP+ VT L+VLS CS+SGL E G IF S+ +
Sbjct: 491 IINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKY 550
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
+ P YACM++LLGR GL+++A L+ +A + W +LL +CR+H N +G+ A
Sbjct: 551 GISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRA 610
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSG------KLKEAAGVLQTLKRKG 545
AE L ++P Y+ + Y G +++E A + ++ G
Sbjct: 611 AEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIG 658
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 213/474 (44%), Gaps = 51/474 (10%)
Query: 110 ASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFG 169
AST+ ++++VC R +V +IS GF ++++ + ++ ++ L+ A KLF
Sbjct: 112 ASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFD 171
Query: 170 DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQV 229
+M +R++ ++ +G+ F ++L M +E T+ M+R + L+
Sbjct: 172 EMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYE 231
Query: 230 GRQIHSCALKMGVG-GDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
G+Q+HS +K G + FVA L+D YS CG + + +F+ +PEK + WNSI++ A
Sbjct: 232 GKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA 291
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFG-SDI 347
+G ++L ++ +M+ G + + C R + ++ KQ H +++ GF S +
Sbjct: 292 DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSL 351
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE 407
+AL+D Y K +E++ ++ + N+ N+L+ + G + I+MF M+ E
Sbjct: 352 HVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDE 411
Query: 408 RVIPNHVTFLAVLSACSY-------------------------------------SGLSE 430
+ VT VL A S SG +E
Sbjct: 412 GTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNE 471
Query: 431 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR---RAPFEPTKNMWVAL 487
++F D P +I R G+ + ++R R P + +++
Sbjct: 472 VSRKVF-----DELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSV 526
Query: 488 LTACRMHGNLELGKFAAEKL---YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVL 538
L+ C G +E G+ + L Y + PG+ Y ++++ +G +++A +L
Sbjct: 527 LSGCSHSGLVEEGELIFDSLESKYGISPGRKL-YACMVDLLGRAGLVEKAERLL 579
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 140/292 (47%), Gaps = 1/292 (0%)
Query: 145 LYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWV 204
+Y NR + +K G +L A + F +M RDVV++ +I G G A L+ M
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 205 EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED 264
+ TF +++ + + G Q+H + +G G + FV AL+ +Y+ ++
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 265 AQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
A FD+M ++ N ++ + G S+ +YL M G + T +IR C
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 325 LASLEHAKQAHAALVRHGFG-SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
+ KQ H+ +V+ G+ S+I LVD+YS G + + F+ + K+VISWN+
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNS 285
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
+++ ++G ++ +F +M P+ F++ L+ CS + + G +I
Sbjct: 286 IVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQI 337
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 206/376 (54%), Gaps = 7/376 (1%)
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVG-GDSFVACALIDMYSKCGSIEDAQCAFDQ 271
TF ++ A VG+QIH +K GV DS V ++ +Y + + DA+ FD+
Sbjct: 118 TFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDE 177
Query: 272 MPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA 331
+P+ V W+ ++ GY G E L ++ EM G + D F+++ + C ++ +L
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQG 237
Query: 332 KQAHAALVRHGF-GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGN 390
K H + + + SD+ TALVD Y+K G +E A VF ++ R+NV SW ALI GY
Sbjct: 238 KWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAA 297
Query: 391 HGQGEQAIQMFEQMLRERVI-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 449
+G ++A+ E++ RE I P+ V L VL+AC++ G E G + +M +++ P+
Sbjct: 298 YGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKH 357
Query: 450 MHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYE 509
HY+C+++L+ R G LD+A LI + P +P ++W ALL CR H N+ELG+ A + L +
Sbjct: 358 EHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLD 417
Query: 510 MDPGKL----CNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFL 565
++ G + V L NIY S + EA+ V ++++G+R P + +EV F+
Sbjct: 418 LEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFV 477
Query: 566 CGDKSHTQTKEIYQKV 581
GD SH +I+ +
Sbjct: 478 SGDVSHPNLLQIHTVI 493
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 150/296 (50%), Gaps = 8/296 (2%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSG-FEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
T+ L+ C+ K++ +++ +G F D ++ VL ++V+ L+LDARK+F +
Sbjct: 118 TFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDE 177
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVG 230
+P+ DVV W ++ G V G SE +F M V+ + + T + A A +G + G
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQG 237
Query: 231 RQIHSCALKMG-VGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
+ IH K + D FV AL+DMY+KCG IE A F ++ + W ++I GYA
Sbjct: 238 KWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAA 297
Query: 290 HGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAAL-VRHGFGSDI 347
+GY+++A++ + R+ G K D + V+ C LE + + R+
Sbjct: 298 YGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKH 357
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVIS-WNALIAGYGNHGQ---GEQAIQ 399
+ +VD + GR++DA ++ ++M K + S W AL+ G H GE A++
Sbjct: 358 EHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVK 413
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/475 (19%), Positives = 195/475 (41%), Gaps = 64/475 (13%)
Query: 212 RTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED----AQC 267
+++ +++ AS ++ + HS + G+ +++ L+ + ++ A
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 268 AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM---RDSGAKIDHFTISIVIRICVR 324
FD + + ++++I + L +L M + + T +I C++
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 325 LASLEHAKQAHAALVRHG-FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
KQ H +V++G F SD T ++ Y + + DAR VFD + + +V+ W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
L+ GY G G + +++F +ML + + P+ + L+AC+ G +G I + +
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 444 KVKPRAMHYACMIELLGREGLLDEAF----ALIRRAPF---------------------- 477
++ ++++ + G ++ A L RR F
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCL 308
Query: 478 ---------EPTKNMWVALLTACRMHGNLELGKFAAEKL---YEMDPGKLCNYVMLLNIY 525
+P + + +L AC G LE G+ E + YE+ P K +Y ++++
Sbjct: 309 ERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITP-KHEHYSCIVDLM 367
Query: 526 NSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEIL 585
+G+L +A +++ + K L W A L G ++H + V +L
Sbjct: 368 CRAGRLDDALNLIEKMPMKPL----ASVW-------GALLNGCRTHKNVELGELAVKNLL 416
Query: 586 DEISRHGYIKENE---MLLPDVDEEEQRLQQYHSEKLAI-AFGLINTPDWTPLQI 636
D G ++E E + L ++ QR + + I G+ TP W+ L++
Sbjct: 417 D--LEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEV 469
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 194/344 (56%), Gaps = 2/344 (0%)
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
+ +++A+ + +G+++HS A+++G GD F I +Y K G E+A+ FD+
Sbjct: 119 SLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDEN 178
Query: 273 PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAK 332
PE+ WN+II G G + EA+ ++++M+ SG + D FT+ V C L L A
Sbjct: 179 PERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAF 238
Query: 333 QAHAALVRHGF--GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGN 390
Q H +++ SDI+ +L+D Y K GRM+ A H+F+ M ++NV+SW+++I GY
Sbjct: 239 QLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAA 298
Query: 391 HGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 450
+G +A++ F QM V PN +TF+ VLSAC + GL E G F M + +++P
Sbjct: 299 NGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLS 358
Query: 451 HYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM 510
HY C+++LL R+G L EA ++ P +P +W L+ C G++E+ ++ A + E+
Sbjct: 359 HYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVEL 418
Query: 511 DPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTW 554
+P YV+L N+Y G K+ V + +K K + +P ++
Sbjct: 419 EPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 143/273 (52%), Gaps = 6/273 (2%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDS 189
K++ + + GF D + + + ++ K G +ARK+F + PER + SW +IGGL +
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHA 196
Query: 190 GDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCAL--KMGVGGDSF 247
G +EA +F+ M + T ++ + GLG + + Q+H C L K D
Sbjct: 197 GRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIM 256
Query: 248 VACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSG 307
+ +LIDMY KCG ++ A F++M ++ V W+S+I GYA +G + EAL + +MR+ G
Sbjct: 257 MLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFG 316
Query: 308 AKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD--IVANTALVDFYSKWGRMED 365
+ + T V+ CV +E K + A+++ F + + +VD S+ G++++
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEGK-TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKE 375
Query: 366 ARHVFDRMHRK-NVISWNALIAGYGNHGQGEQA 397
A+ V + M K NV+ W L+ G G E A
Sbjct: 376 AKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 146/322 (45%), Gaps = 41/322 (12%)
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
DQ P WN+I+ Y H +A+ +YL M S D +++ IVI+ V++
Sbjct: 76 LDQYP--IAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDF 133
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
K+ H+ VR GF D + + Y K G E+AR VFD + + SWNA+I G
Sbjct: 134 TLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGL 193
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS-MSRDHKVKP 447
+ G+ +A++MF M R + P+ T ++V ++C G +++ + + K
Sbjct: 194 NHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKS 253
Query: 448 RAMHYACMIELLGREGLLD----------------------------------EAFALIR 473
M +I++ G+ G +D E F +R
Sbjct: 254 DIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR 313
Query: 474 RAPFEPTKNMWVALLTACRMHGNLELGK--FAAEKL-YEMDPGKLCNYVMLLNIYNSSGK 530
P K +V +L+AC G +E GK FA K +E++PG L +Y ++++ + G+
Sbjct: 314 EFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPG-LSHYGCIVDLLSRDGQ 372
Query: 531 LKEAAGVLQTLKRKGLRMLPTC 552
LKEA V++ + K M+ C
Sbjct: 373 LKEAKKVVEEMPMKPNVMVWGC 394
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 211/409 (51%), Gaps = 41/409 (10%)
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
N ++ ++K G ++ AR LF M +RD +SW T+I G V +AF LF M
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------ 338
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
R HS + ++ Y+ G++E A+
Sbjct: 339 --------------------PNRDAHSWNM-------------MVSGYASVGNVELARHY 365
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
F++ PEK TV WNSIIA Y + +EA+ +++ M G K D T++ ++ L +L
Sbjct: 366 FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL 425
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH-RKNVISWNALIAG 387
Q H +V+ D+ + AL+ YS+ G + ++R +FD M ++ VI+WNA+I G
Sbjct: 426 RLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG 484
Query: 388 YGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 447
Y HG +A+ +F M + P+H+TF++VL+AC+++GL + F SM +K++P
Sbjct: 485 YAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEP 544
Query: 448 RAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
+ HY+ ++ + +G +EA +I PFEP K +W ALL ACR++ N+ L AAE +
Sbjct: 545 QMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAM 604
Query: 508 YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIE 556
++P YV+L N+Y G EA+ V ++ K ++ +W++
Sbjct: 605 SRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 206/477 (43%), Gaps = 74/477 (15%)
Query: 120 CVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSW 179
C G+R + +K+F+ M S D + N ++ + K + +A LF MPER+ VSW
Sbjct: 115 CGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170
Query: 180 MTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVR----ASAGLGLIQVGRQIHS 235
+I G +G+ A LF M V+ + A +++ + A L Q G
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYG----- 225
Query: 236 CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE---------------KTTVGW 280
+L G + LI Y + G +E A+C FDQ+P+ K V W
Sbjct: 226 -SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSW 284
Query: 281 NSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR 340
NS+I Y G A ++ +M+D D + + +I V ++ +E A AL
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDA----FALFS 336
Query: 341 HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQM 400
D + +V Y+ G +E ARH F++ K+ +SWN++IA Y + ++A+ +
Sbjct: 337 EMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDL 396
Query: 401 FEQMLRERVIPNHVTFLAVLSACS----------------------------YSGLSERG 432
F +M E P+ T ++LSA + + R
Sbjct: 397 FIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRC 456
Query: 433 WEIFYS--MSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRRAPFEPTKNMWVAL 487
EI S + + K+K + + MI G EA F ++ P+ +V++
Sbjct: 457 GEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSV 516
Query: 488 LTACRMHGNLELGK---FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
L AC G ++ K + +Y+++P ++ +Y L+N+ + G+ +EA ++ ++
Sbjct: 517 LNACAHAGLVDEAKAQFVSMMSVYKIEP-QMEHYSSLVNVTSGQGQFEEAMYIITSM 572
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 180/445 (40%), Gaps = 65/445 (14%)
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
N+ L ++ G + +AR +F + R+ V+W T+I G V + ++A LF M
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PK 99
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
T+ TM+ G I+ + +M DSF +I Y+K I +A
Sbjct: 100 RDVVTWNTMISGYVSCGGIRFLEEARKLFDEMP-SRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM--RDS-------GAKIDHFTISIVI 319
F++MPE+ V W+++I G+ +G + A+ ++ +M +DS I + +S
Sbjct: 159 FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAA 218
Query: 320 RICVRLASLEHAKQ-----------------------------------AHAALVRHGFG 344
+ + SL ++ H R F
Sbjct: 219 WVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFC 278
Query: 345 SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
++V+ +++ Y K G + AR +FD+M ++ ISWN +I GY + + E A +F +M
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Query: 405 LRERVIPNHV--TFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 462
PN ++ ++S + G E F H V + +I +
Sbjct: 339 ------PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-----WNSIIAAYEKN 387
Query: 463 GLLDEAFALIRRAPFE---PTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYV 519
EA L R E P + +LL+A NL LG + + + + +
Sbjct: 388 KDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHN 447
Query: 520 MLLNIYNSSGKLKEAAGVLQTLKRK 544
L+ +Y+ G++ E+ + +K K
Sbjct: 448 ALITMYSRCGEIMESRRIFDEMKLK 472
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 194/368 (52%), Gaps = 33/368 (8%)
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
T+A ++++ + L ++ G+ +H ++ G + ++++Y+ G + DAQ FD+M
Sbjct: 104 TYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEM 163
Query: 273 PEKTTVGWNSIIAGY--------ALH-----------------------GYSEEALSIYL 301
E+ V WN +I G+ LH G EAL ++
Sbjct: 164 SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFC 223
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD-IVANTALVDFYSKW 360
EM D G D T+ V+ I L L+ K H+ G D I ALVDFY K
Sbjct: 224 EMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS 283
Query: 361 GRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE-RVIPNHVTFLAV 419
G +E A +F +M R+NV+SWN LI+G +G+GE I +F+ M+ E +V PN TFL V
Sbjct: 284 GDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGV 343
Query: 420 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEP 479
L+ CSY+G ERG E+F M K++ R HY M++L+ R G + EAF ++ P
Sbjct: 344 LACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNA 403
Query: 480 TKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQ 539
MW +LL+ACR HG+++L + AA +L +++PG NYV+L N+Y G+ ++ V
Sbjct: 404 NAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRT 463
Query: 540 TLKRKGLR 547
+K+ LR
Sbjct: 464 LMKKNRLR 471
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 153/362 (42%), Gaps = 37/362 (10%)
Query: 66 AQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRS 125
+ I P+ + I+ L E++ F ++ G AD TY L+ C L
Sbjct: 60 SHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWAD--EYTYAPLLKSCSSLSD 117
Query: 126 IRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVV-------- 177
+R K V +I +GF + V+ ++ G M DA+K+F +M ER+VV
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRG 177
Query: 178 -----------------------SWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTF 214
SW ++I L G EA LF M + D T
Sbjct: 178 FCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATV 237
Query: 215 ATMVRASAGLGLIQVGRQIHSCALKMGVGGDSF-VACALIDMYSKCGSIEDAQCAFDQMP 273
T++ SA LG++ G+ IHS A G+ D V AL+D Y K G +E A F +M
Sbjct: 238 VTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ 297
Query: 274 EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSG-AKIDHFTISIVIRICVRLASLEHAK 332
+ V WN++I+G A++G E + ++ M + G + T V+ C +E +
Sbjct: 298 RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGE 357
Query: 333 QAHAALV-RHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH-RKNVISWNALIAGYGN 390
+ ++ R + A+VD S+ GR+ +A M N W +L++ +
Sbjct: 358 ELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRS 417
Query: 391 HG 392
HG
Sbjct: 418 HG 419
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 11/238 (4%)
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA---FDQMPEKTTVGWNSIIAGYA 288
+IH+ L+ + G + + I S CGS+ ++ A F + + +N++I Y+
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFI---SICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
L G E+LS + M+ G D +T + +++ C L+ L K H L+R GF
Sbjct: 79 LVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK 138
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
+V+ Y+ GRM DA+ VFD M +NV+ WN +I G+ + G E+ + +F+QM ER
Sbjct: 139 IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQM-SER 197
Query: 409 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 466
I + + ++ LS C G E+F M D P ++ + G+LD
Sbjct: 198 SIVSWNSMISSLSKC---GRDREALELFCEMI-DQGFDPDEATVVTVLPISASLGVLD 251
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 265/540 (49%), Gaps = 51/540 (9%)
Query: 52 KTEYVDRKMPVLDD-AQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGA 110
K + V + VLD+ + S S + + G C R+A +F GD G+
Sbjct: 78 KVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFC---RDAFRMF------GDARVSGS 128
Query: 111 STYDALV-NVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFG 169
V +V G I G ++ + SGFE ++Y+ ++ M+ +CG + A ++F
Sbjct: 129 GMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFE 188
Query: 170 DMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMW-VEFNDGRSRTFATMVRASAGLGLIQ 228
+P + VV++ I GL+++G + +F M + TF + A A L +Q
Sbjct: 189 KVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQ 248
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE-KTTVGWNSIIAGY 287
GRQ+H +K ++ V ALIDMYSKC + A F ++ + + + WNS+I+G
Sbjct: 249 YGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGM 308
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFT------------------------ISIV----- 318
++G E A+ ++ ++ G K D T +S+V
Sbjct: 309 MINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSL 368
Query: 319 ------IRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
+ C + +L++ K+ H +++ DI T+L+D Y K G AR +FDR
Sbjct: 369 KCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDR 428
Query: 373 MHRK--NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 430
K + + WN +I+GYG HG+ E AI++FE + E+V P+ TF AVLSACS+ G E
Sbjct: 429 FEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVE 488
Query: 431 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTA 490
+G +IF M ++ KP H CMI+LLGR G L EA +I + + +LL +
Sbjct: 489 KGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGS 547
Query: 491 CRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLP 550
CR H + LG+ AA KL E++P +V+L +IY + + ++ + Q + +K L LP
Sbjct: 548 CRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLP 607
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 174/330 (52%), Gaps = 5/330 (1%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ L+ C L + + + ++ +GF D++ ++ M++K + DA K+ +M
Sbjct: 33 TFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM 92
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
PER + S + GL+++G +AF +F V + S T A+++ G G I+ G
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVL---GGCGDIEGGM 149
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
Q+H A+K G + +V +L+ MYS+CG A F+++P K+ V +N+ I+G +G
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 292 YSEEALSIYLEMRD-SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
S++ MR S + + T I C L +L++ +Q H +++ F + +
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
Query: 351 TALVDFYSKWGRMEDARHVFDRMH-RKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
TAL+D YSK + A VF + +N+ISWN++I+G +GQ E A+++FE++ E +
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 410 IPNHVTFLAVLSACSYSGLSERGWEIFYSM 439
P+ T+ +++S S G ++ F M
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 91/222 (40%), Gaps = 31/222 (13%)
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
+ FT +++ C +L + + HA +V+ GF D+ TALV Y K ++ DA V
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 371 DRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS------ 424
D M + + S NA ++G +G A +MF N VT +VL C
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGM 149
Query: 425 ---------------YSGLS-----ERGWEIFYSMSRDHKVKPRA-MHYACMIELLGREG 463
Y G S R E + KV ++ + Y I L G
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 464 LLD---EAFALIRR-APFEPTKNMWVALLTACRMHGNLELGK 501
+++ F L+R+ + EP +V +TAC NL+ G+
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGR 251
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 231/457 (50%), Gaps = 20/457 (4%)
Query: 148 MNRVLLMHVKC--GLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVE 205
+N++ L + C G++ A K+F +M E++VV W ++I G + + D A F +
Sbjct: 29 LNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF-----D 83
Query: 206 FNDGRSRT-FATMVRASAGLGLIQVGRQIHSCAL-KMGVGGDSFVACALIDMYSKCGSIE 263
+ R + TM+ G I++G + + +L D +++ Y+ G +E
Sbjct: 84 LSPERDIVLWNTMIS-----GYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDME 138
Query: 264 DAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI-DHFTISIVIRIC 322
+ FD MPE+ WN +I GYA +G E L + M D G+ + + T+++V+ C
Sbjct: 139 ACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 323 VRLASLEHAKQAHAALVRHGFGS-DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISW 381
+L + + K H G+ D+ AL+D Y K G +E A VF + R+++ISW
Sbjct: 199 AKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISW 258
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 441
N +I G HG G +A+ +F +M + P+ VTF+ VL AC + GL E G F SM
Sbjct: 259 NTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFT 318
Query: 442 DHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGK 501
D + P H C+++LL R G L +A I + P + +W LL A +++ +++G+
Sbjct: 319 DFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGE 378
Query: 502 FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQP 561
A E+L +++P N+VML NIY +G+ +AA + ++ G + +WIE
Sbjct: 379 VALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGL 438
Query: 562 HAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENE 598
F + H +T+E+ + IL E+ +++ E
Sbjct: 439 VKFYSSGEKHPRTEELQR----ILRELKSFNILRDEE 471
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 38/296 (12%)
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF-- 199
E D+ + N ++ +++ G ML+AR LF MP RDV+SW TV+ G + GD +F
Sbjct: 87 ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDD 146
Query: 200 -----LFMWVEFNDGRSR-------------------------TFATMVRASAGLGLIQV 229
+F W G ++ T ++ A A LG
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF 206
Query: 230 GRQIHSCALKMGVGG-DSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
G+ +H +G D V ALIDMY KCG+IE A F + + + WN++I G A
Sbjct: 207 GKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLA 266
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA-KQAHAALVRHGFGSDI 347
HG+ EAL+++ EM++SG D T V+ C + +E ++ +I
Sbjct: 267 AHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEI 326
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRK-NVISWNALIAG---YGNHGQGEQAIQ 399
+VD S+ G + A ++M K + + W L+ Y GE A++
Sbjct: 327 EHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALE 382
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 225 bits (573), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 238/465 (51%), Gaps = 11/465 (2%)
Query: 139 SGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP----ERDVVSWMTVIGGLVDSGDYSE 194
S E + +R+ L+ + G + +A K F DM E + ++++ ++ G D SE
Sbjct: 31 STSETTVSWTSRINLL-TRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSE 89
Query: 195 AFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD--SFVACAL 252
A G L + G R + +A +G+ + L D S +
Sbjct: 90 ALGDLLHGYA-CKLGLDRNHVMV--GTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146
Query: 253 IDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDH 312
ID Y + G +++A FD+MPE+ + W ++I G+ GY EEAL + EM+ SG K D+
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
I + C L +L H ++ F +++ + +L+D Y + G +E AR VF
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 373 MHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG 432
M ++ V+SWN++I G+ +G +++ F +M + P+ VTF L+ACS+ GL E G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 433 WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACR 492
F M D+++ PR HY C+++L R G L++A L++ P +P + + +LL AC
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 493 MHG-NLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPT 551
HG N+ L + + L +++ NYV+L N+Y + GK + A+ + + +K GL+ P
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446
Query: 552 CTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKE 596
+ IE+ H F+ GD +H +T I + ++ I ++ G + E
Sbjct: 447 FSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVE 491
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 157/335 (46%), Gaps = 24/335 (7%)
Query: 121 VGLRSIRG----VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDV 176
+G+ S RG + VF+YM + + N ++ +++ G + +A K+F MPERD+
Sbjct: 116 IGMYSKRGRFKKARLVFDYM----EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDL 171
Query: 177 VSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSC 236
+SW +I G V G EA F M + + A LG + G +H
Sbjct: 172 ISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRY 231
Query: 237 ALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEA 296
L + V+ +LID+Y +CG +E A+ F M ++T V WNS+I G+A +G + E+
Sbjct: 232 VLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHES 291
Query: 297 LSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAAL-VRHGFGSDIVANTALVD 355
L + +M++ G K D T + + C + +E + + + I LVD
Sbjct: 292 LVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVD 351
Query: 356 FYSKWGRMEDARHVFDRMHRK-NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHV 414
YS+ GR+EDA + M K N + +L+A NHG I + E++++ H+
Sbjct: 352 LYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN---IVLAERLMK------HL 402
Query: 415 TFLAVLSACSYSGLS-----ERGWEIFYSMSRDHK 444
T L V S +Y LS + WE M R K
Sbjct: 403 TDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMK 437
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 149/351 (42%), Gaps = 83/351 (23%)
Query: 270 DQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
+Q +TTV W S I +G EA + +M +G + +H T ++ C S
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTS-- 86
Query: 330 HAKQAHAALVRHGFG-------SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWN 382
+A L+ HG+ + ++ TA++ YSK GR + AR VFD M KN ++WN
Sbjct: 87 -GSEALGDLL-HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 383 ALIAGYGNHGQGEQAIQMFEQM---------------------------LRERVI----P 411
+I GY GQ + A +MF++M RE I P
Sbjct: 145 TMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKP 204
Query: 412 NHVTFLAVLSACSYSGLSERG-WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA-- 468
++V +A L+AC+ G G W Y +S+D K R + +I+L R G ++ A
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN--SLIDLYCRCGCVEFARQ 262
Query: 469 --------------------------------FALIRRAPFEPTKNMWVALLTACRMHGN 496
F ++ F+P + LTAC G
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGL 322
Query: 497 LELG--KFAAEKL-YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
+E G F K Y + P ++ +Y L+++Y+ +G+L++A ++Q++ K
Sbjct: 323 VEEGLRYFQIMKCDYRISP-RIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 89 HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMM 148
EA+ F +++ G D A A +N C L ++ V Y++S F+ ++ +
Sbjct: 187 QEEALLWFREMQISGVKPDYVAII--AALNACTNLGALSFGLWVHRYVLSQDFKNNVRVS 244
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
N ++ ++ +CG + AR++F +M +R VVSW +VI G +G+ E+ F M +
Sbjct: 245 NSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK 304
Query: 209 GRSRTFATMVRASAGLGLIQVGR---QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDA 265
+ TF + A + +GL++ G QI C ++ + + C L+D+YS+ G +EDA
Sbjct: 305 PDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHY-GC-LVDLYSRAGRLEDA 362
Query: 266 QCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR 304
MP K N ++ G L S +I L R
Sbjct: 363 LKLVQSMPMKP----NEVVIGSLLAACSNHGNNIVLAER 397
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/400 (34%), Positives = 204/400 (51%), Gaps = 45/400 (11%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
++ GF + Y+ N ++L H CG + A +LF D + V+W ++ G G EA
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 196 FGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDM 255
LF M + D QV + +I
Sbjct: 198 MRLFDEM--PYKD-------------------QVAWNV------------------MITG 218
Query: 256 YSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTI 315
KC ++ A+ FD+ EK V WN++I+GY GY +EAL I+ EMRD+G D TI
Sbjct: 219 CLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTI 278
Query: 316 SIVIRICVRLASLEHAKQAHAALVRHG-FGSDIVANT----ALVDFYSKWGRMEDARHVF 370
++ C L LE K+ H ++ S I T AL+D Y+K G ++ A VF
Sbjct: 279 LSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVF 338
Query: 371 DRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 430
+ +++ +WN LI G H E +I+MFE+M R +V PN VTF+ V+ ACS+SG +
Sbjct: 339 RGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVD 397
Query: 431 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTA 490
G + F M + ++P HY CM+++LGR G L+EAF + EP +W LL A
Sbjct: 398 EGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGA 457
Query: 491 CRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGK 530
C+++GN+ELGK+A EKL M + +YV+L NIY S+G+
Sbjct: 458 CKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQ 497
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 196/461 (42%), Gaps = 82/461 (17%)
Query: 124 RSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKC--GLMLDARKLFGDMPERDVVSWMT 181
++IR +K++ M+ +G +L ++ ++ G + A KLF ++P+ DV
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNH 82
Query: 182 VIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMG 241
V+ G S + L+ M TF +++A + L G H ++ G
Sbjct: 83 VLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHG 142
Query: 242 VGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYL 301
+ +V ALI ++ CG + A FD + V W+S+ +GYA G +EA+ ++
Sbjct: 143 FVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFD 202
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
EM D +++I C+ K
Sbjct: 203 EM----PYKDQVAWNVMITGCL-----------------------------------KCK 223
Query: 362 RMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS 421
M+ AR +FDR K+V++WNA+I+GY N G ++A+ +F++M P+ VT L++LS
Sbjct: 224 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
Query: 422 ACSYSGLSERGWE----IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR---- 473
AC+ G E G I + S + + +I++ + G +D A + R
Sbjct: 284 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 343
Query: 474 -----------------------------RAPFEPTKNMWVALLTACRMHGNLELGK--F 502
R P + ++ ++ AC G ++ G+ F
Sbjct: 344 RDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYF 403
Query: 503 AAEK-LYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLK 542
+ + +Y ++P + +Y ++++ +G+L+EA ++++K
Sbjct: 404 SLMRDMYNIEPN-IKHYGCMVDMLGRAGQLEEAFMFVESMK 443
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 153/336 (45%), Gaps = 20/336 (5%)
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALI--DMYSKCGSIEDAQCAFDQMPEKTTVGWNSII 284
I+ +QIH+ + G+ + V LI S G+++ A FD++P+ N ++
Sbjct: 25 IRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVL 84
Query: 285 AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFG 344
G A E+ +S+Y EM G D +T + V++ C +L + H +VRHGF
Sbjct: 85 RGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV 144
Query: 345 SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
+ AL+ F++ G + A +FD + + ++W+++ +GY G+ ++A+++F++M
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 405 LRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGL 464
+ + V + +++ C + E+F D + + + MI G
Sbjct: 205 PYK----DQVAWNVMITGCLKCKEMDSARELF-----DRFTEKDVVTWNAMISGYVNCGY 255
Query: 465 LDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYV-- 519
EA F +R A P ++LL+AC + G+LE GK + E YV
Sbjct: 256 PKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT 315
Query: 520 ----MLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPT 551
L+++Y G + A V + +K + L T
Sbjct: 316 PIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNT 351
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 230/437 (52%), Gaps = 7/437 (1%)
Query: 115 ALVNVCVGLRSIRGVKKVFN--YMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
+L+ +C + S V ++F+ ++ + + + ++ M++K A +F M
Sbjct: 153 SLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQME 212
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL-IQVGR 231
++ VSW +I G V + +Y LF M E T +++ A L + +
Sbjct: 213 VKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVK 272
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
+IH + + G D + A + MY +CG++ ++ F+ + V W+S+I+GYA G
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETG 332
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
E +++ +MR G + + T+ ++ C L A H+ +++ GF S I+
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGN 392
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
AL+D Y+K G + AR VF + K+++SW+++I YG HG G +A+++F+ M++
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV 452
Query: 412 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM-HYACMIELLGREGLLDEAFA 470
+ + FLA+LSAC+++GL E IF + H P + HYAC I LLGR G +D+AF
Sbjct: 453 DDMAFLAILSACNHAGLVEEAQTIFTQAGKYH--MPVTLEHYACYINLLGRFGKIDDAFE 510
Query: 471 LIRRAPFEPTKNMWVALLTACRMHGNLEL-GKFAAEKLYEMDPGKLCNYVMLLNIYNSSG 529
+ P +P+ +W +LL+AC HG L++ GK A +L + +P NYV+L I+ SG
Sbjct: 511 VTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESG 570
Query: 530 KLKEAAGVLQTLKRKGL 546
A V + ++R+ L
Sbjct: 571 NYHAAEEVRRVMQRRKL 587
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 191/450 (42%), Gaps = 47/450 (10%)
Query: 137 ISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAF 196
+ +G + D + N ++ M+ K RK+F +M RD VS+ ++I G EA
Sbjct: 74 LKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAM 133
Query: 197 GLFLFMWVEFNDGRSRTFATMVRASAGLG-LIQVGRQIHSCALKMGVGGDS-FVACALID 254
L M+ +S A+++ +G +V R H+ L +S ++ AL+D
Sbjct: 134 KLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 255 MYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFT 314
MY K A FDQM K V W ++I+G + E + ++ M+ + + T
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 315 ISIVIRICVRL---ASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
+ V+ CV L +SL K+ H RHG +D A + Y + G + +R +F+
Sbjct: 254 LLSVLPACVELNYGSSL--VKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFE 311
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYS----- 426
++V+ W+++I+GY G + + + QM +E + N VT LA++SAC+ S
Sbjct: 312 TSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSF 371
Query: 427 ------------------------------GLSERGWEIFYSMSRDHKVKPRAMHYACMI 456
G E+FY ++ V +M A +
Sbjct: 372 ASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGL 431
Query: 457 ELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGK--FAAEKLYEMDPGK 514
G E L E F + + E ++A+L+AC G +E + F Y M P
Sbjct: 432 HGHGSEAL--EIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHM-PVT 488
Query: 515 LCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
L +Y +N+ GK+ +A V + K
Sbjct: 489 LEHYACYINLLGRFGKIDDAFEVTINMPMK 518
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 121/245 (49%), Gaps = 4/245 (1%)
Query: 183 IGGLVDSGDYSEAFGLF-LFMWVEFNDGRSRTFATMVRASA-GLGLIQVGRQIHSCALKM 240
+ GLV Y EA L+ L + +G + ++++A A +G Q+H LK
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 241 GVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIY 300
G D+ V+ +LI MY+K + FD+M + TV + SII G EA+ +
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 301 LEMRDSGAKIDHFTISIVIRICVRLASLEH-AKQAHA-ALVRHGFGSDIVANTALVDFYS 358
EM G ++ ++ +C R+ S A+ HA LV ++ +TALVD Y
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYL 196
Query: 359 KWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLA 418
K+ A HVFD+M KN +SW A+I+G + E + +F M RE + PN VT L+
Sbjct: 197 KFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 419 VLSAC 423
VL AC
Sbjct: 257 VLPAC 261
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 118/261 (45%), Gaps = 10/261 (3%)
Query: 292 YSEEALSIY-LEMRDSGAKIDHFTISIVIRICV-RLASLEHAKQAHAALVRHGFGSDIVA 349
+ +EAL +Y L++ G + VI+ C + Q H ++ G D V
Sbjct: 25 FYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVV 84
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
+ +L+ Y+K+ R R VFD M ++ +S+ ++I G +A+++ ++M
Sbjct: 85 SNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGF 144
Query: 410 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSR-DHKVKPRAMHYACMIELLGREGLLDEA 468
IP ++L+ C+ G S + +F+++ D +++ + ++++ + A
Sbjct: 145 IPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAA 204
Query: 469 FALIRRAPFEPTKNMWVALLTACRMHGNLELGK--FAAEKLYEMDPGKLCNYVMLLNIYN 526
F + + + + W A+++ C + N E+G F A + + P N V LL++
Sbjct: 205 FHVFDQMEVKNEVS-WTAMISGCVANQNYEMGVDLFRAMQRENLRP----NRVTLLSVLP 259
Query: 527 SSGKLKEAAGVLQTLKRKGLR 547
+ +L + +++ + R
Sbjct: 260 ACVELNYGSSLVKEIHGFSFR 280
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 250/497 (50%), Gaps = 16/497 (3%)
Query: 94 ELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFE-PDLYMMNRVL 152
E+ + E DC T +++ C + I + V + I GF+ D+++ N ++
Sbjct: 215 EMVHEAKTEPDCV-----TVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLI 269
Query: 153 LMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR 212
M+ K + A ++F + R++VSW +++ G V + Y EA +F M E +
Sbjct: 270 DMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEV 329
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
T +++R + IH ++ G + +LID Y+ C ++DA D M
Sbjct: 330 TVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSM 389
Query: 273 PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAK 332
K V +++I+G A G S+EA+SI+ MRD+ I T+ ++ C A L +K
Sbjct: 390 TYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAI---TVISLLNACSVSADLRTSK 446
Query: 333 QAHAALVRHGFG-SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNH 391
AH +R +DI T++VD Y+K G +E AR FD++ KN+ISW +I+ Y +
Sbjct: 447 WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAIN 506
Query: 392 GQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM-SRDHKVKPRAM 450
G ++A+ +F++M ++ PN VT+LA LSAC++ GL ++G IF SM DHK P
Sbjct: 507 GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK--PSLQ 564
Query: 451 HYACMIELLGREGLLDEAFALIRRAP--FEPTKNMWVALLTACRMH-GNLELGKFAAEKL 507
HY+C++++L R G +D A LI+ P + + W A+L+ CR L + ++
Sbjct: 565 HYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEV 624
Query: 508 YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCG 567
E++P Y++ + + + ++ A + + +K + +R++ + + FL G
Sbjct: 625 LELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAG 684
Query: 568 DKSHTQTKEIYQKVDEI 584
DK E+ V +
Sbjct: 685 DKLSQSDSELNDVVQSL 701
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 216/449 (48%), Gaps = 41/449 (9%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDS 189
+K+ Y+I SGF + N +L M+ L ARKLF +M ERDV+SW VI V S
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSD-SLSARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 190 GDYSEAFGLFLFMWVEF-NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVG-GDSF 247
+ LF M E + T ++++A + I VGR +H +++ G D F
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 248 VACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSG 307
V +LIDMYSK ++ A FD+ + V WNSI+AG+ + +EAL ++ M
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323
Query: 308 AKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDAR 367
++D T+ ++R+C K H ++R G+ S+ VA ++L+D Y+ ++DA
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 368 HVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSG 427
V D M K+V+S + +I+G + G+ ++AI +F M R PN +T +++L+ACS S
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACSVSA 440
Query: 428 -LSERGWEIFYSMSR------------------------------DHKVKPRAMHYACMI 456
L W ++ R D + + + +I
Sbjct: 441 DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVII 500
Query: 457 ELLGREGLLDEAFAL---IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMD-P 512
GL D+A AL +++ + P ++A L+AC G ++ G + + E D
Sbjct: 501 SAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK 560
Query: 513 GKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
L +Y ++++ + +G++ A +++ L
Sbjct: 561 PSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 180/391 (46%), Gaps = 35/391 (8%)
Query: 145 LYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWV 204
L+ N + ++KCG + + F M RD VSW ++ GL+D G E F + V
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 205 EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED 264
+ + T ++ A L G +IH ++ G G S V +++ MY+ S+
Sbjct: 121 WGFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS- 177
Query: 265 AQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICV 323
A+ FD+M E+ + W+ +I Y L ++ EM ++ + D T++ V++ C
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 324 RLASLEHAKQAHAALVRHGFG-SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWN 382
+ ++ + H +R GF +D+ +L+D YSK ++ A VFD +N++SWN
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 383 ALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSY-----------SGLSER 431
+++AG+ ++ + ++A++MF M++E V + VT +++L C + + R
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 432 GWE-------------IFYSMSRDHKVKPRAMHY------ACMIELLGREGLLDEAFALI 472
G+E S+ D +M Y + MI L G DEA ++
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 473 RRAPFEPTKNMWVALLTACRMHGNLELGKFA 503
P ++LL AC + +L K+A
Sbjct: 418 CHMRDTPNAITVISLLNACSVSADLRTSKWA 448
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 177/392 (45%), Gaps = 26/392 (6%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
R+ EA+E+F ++ E +V T +L+ VC K + +I G+E +
Sbjct: 307 QRYDEALEMFHLMVQEA--VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV 364
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
++ ++ + C L+ DA + M +DVVS T+I GL +G EA +F M
Sbjct: 365 ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---R 421
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVG-GDSFVACALIDMYSKCGSIEDA 265
+ + T +++ A + ++ + H A++ + D V +++D Y+KCG+IE A
Sbjct: 422 DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMA 481
Query: 266 QCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRL 325
+ FDQ+ EK + W II+ YA++G ++AL+++ EM+ G + T + C
Sbjct: 482 RRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHG 541
Query: 326 ASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH---RKNVISWN 382
++ ++V + + +VD S+ G ++ A + + + +W
Sbjct: 542 GLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWG 601
Query: 383 ALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSY-----SGLSERGWEIFY 437
A+++G N F++++ + V L L + Y + +E+ WE
Sbjct: 602 AILSGCRNR---------FKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVA 652
Query: 438 SMSRDHKVKPRAMHYACMIELLGREGLLDEAF 469
M R VK R + ++ REG L + F
Sbjct: 653 MMRR--LVKERKVRVVAGYSMV-REGNLAKRF 681
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 191/340 (56%), Gaps = 4/340 (1%)
Query: 251 ALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM-RDSGAK 309
A++ Y++ G I +A F+ MPE+ WN+I+A +G EA+S++ M + +
Sbjct: 198 AMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIR 257
Query: 310 IDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHV 369
+ T+ V+ C + +L+ AK HA R SD+ + +LVD Y K G +E+A V
Sbjct: 258 PNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSV 317
Query: 370 FDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR---ERVIPNHVTFLAVLSACSYS 426
F +K++ +WN++I + HG+ E+AI +FE+M++ + P+H+TF+ +L+AC++
Sbjct: 318 FKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHG 377
Query: 427 GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVA 486
GL +G F M+ ++PR HY C+I+LLGR G DEA ++ + + +W +
Sbjct: 378 GLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGS 437
Query: 487 LLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
LL AC++HG+L+L + A + L ++P M+ N+Y G +EA + +K +
Sbjct: 438 LLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNA 497
Query: 547 RMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILD 586
P + IE+ + H F DKSH +T+EIY +D ++
Sbjct: 498 YKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 127/253 (50%), Gaps = 14/253 (5%)
Query: 155 HVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR-- 212
+ + G + +A LF DMPERDV SW ++ +G + EA LF M N+ R
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRM---INEPSIRPN 259
Query: 213 --TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
T ++ A A G +Q+ + IH+ A + + D FV+ +L+D+Y KCG++E+A F
Sbjct: 260 EVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFK 319
Query: 271 QMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRD---SGAKIDHFTISIVIRICVRLAS 327
+K+ WNS+I +ALHG SEEA++++ EM + K DH T ++ C
Sbjct: 320 MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH-GG 378
Query: 328 LEHAKQAHAALVRHGFGSD--IVANTALVDFYSKWGRMEDARHVFDRMHRK-NVISWNAL 384
L + + L+ + FG + I L+D + GR ++A V M K + W +L
Sbjct: 379 LVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSL 438
Query: 385 IAGYGNHGQGEQA 397
+ HG + A
Sbjct: 439 LNACKIHGHLDLA 451
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 150/325 (46%), Gaps = 23/325 (7%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYS-KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA- 288
+Q+ S + G+ F+ L+ + + ++ A+ FD+ T + +++ Y+
Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSS 100
Query: 289 -LHGYSEEALSIY-LEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
L ++ A S + L + S + +HF +V++ L+S H L + GF
Sbjct: 101 SLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLY 160
Query: 347 IVANTALVDFY-SKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
+V TAL+ Y S + AR +FD M +NV+SW A+++GY G A+ +FE M
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDM- 219
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
ER +P ++ A+L+AC+ +GL +F M + ++P + C++ + G L
Sbjct: 220 PERDVP---SWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL 276
Query: 466 D-----EAFALIRRAPFEP-TKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGK-LCNY 518
AFA R + N V L C GNLE A +++M K L +
Sbjct: 277 QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC---GNLE----EASSVFKMASKKSLTAW 329
Query: 519 VMLLNIYNSSGKLKEAAGVLQTLKR 543
++N + G+ +EA V + + +
Sbjct: 330 NSMINCFALHGRSEEAIAVFEEMMK 354
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 212/401 (52%), Gaps = 10/401 (2%)
Query: 108 VGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKL 167
V S +D V C L S R +VF+ S DL + + GL +AR+L
Sbjct: 300 VSTSVFDMYVK-CDRLESAR---RVFDQTRSK----DLKSWTSAMSGYAMSGLTREAREL 351
Query: 168 FGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
F MPER++VSW ++GG V + ++ EA M E + + T ++ +G+ +
Sbjct: 352 FDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDV 411
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE-KTTVGWNSIIAG 286
Q+G+Q H + G + VA AL+DMY KCG+++ A F QM E + V WN+++ G
Sbjct: 412 QMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTG 471
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
A G SE+ALS + M+ AK +T++ ++ C + +L K H L+R G+ D
Sbjct: 472 VARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKID 530
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
+V A+VD YSK + A VF +++I WN++I G +G+ ++ ++F +
Sbjct: 531 VVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLEN 590
Query: 407 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 466
E V P+HVTFL +L AC G E G++ F SMS + + P+ HY CMIEL + G L
Sbjct: 591 EGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLH 650
Query: 467 EAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
+ + PF+P M + AC+ + +LG +AA++L
Sbjct: 651 QLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 200/417 (47%), Gaps = 32/417 (7%)
Query: 113 YDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
Y+ L C + +KV +++++ P ++++NR + + KCG + DAR+LF +MP
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQ 232
ERD SW VI +G E F +F M + +FA ++++ + +++ RQ
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 233 IHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGY 292
+H +K G G+ + +++D+Y KC + DA+ FD++ + V WN I+ Y G+
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 293 SEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTA 352
++EA+ ++ +M + + + T+S V+ C R +LE K HA V+ +D V +T+
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTS 303
Query: 353 LVDFYSKWGRMEDARHVFDR-------------------------------MHRKNVISW 381
+ D Y K R+E AR VFD+ M +N++SW
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSW 363
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 441
NA++ GY + + ++A+ M +E ++VT + +L+ CS + G + + R
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 442 DHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE 498
H + ++++ G+ G L A R+ + W ALLT G E
Sbjct: 424 -HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSE 479
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 222/484 (45%), Gaps = 73/484 (15%)
Query: 86 CNRHREAMELFEILE-LEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPD 144
C ++ + E+F + + D +++ ++ C + +R ++++ ++ G+ +
Sbjct: 137 CAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN 196
Query: 145 LYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWV 204
+ + ++ ++ KC +M DAR++F ++ VSW ++ ++ G EA +F F +
Sbjct: 197 VDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMF-FKML 255
Query: 205 EFN-DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIE 263
E N + T ++++ A + ++VG+ IH+ A+K+ V D+ V+ ++ DMY KC +E
Sbjct: 256 ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLE 315
Query: 264 DAQCAFDQ-------------------------------MPEKTTVGWNSIIAGYALHGY 292
A+ FDQ MPE+ V WN+++ GY
Sbjct: 316 SARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHE 375
Query: 293 SEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTA 352
+EAL MR ID+ T+ ++ +C ++ ++ KQAH + RHG+ ++++ A
Sbjct: 376 WDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANA 435
Query: 353 LVDFYSKWGRMEDARHVFDRMHR-KNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
L+D Y K G ++ A F +M ++ +SWNAL+ G G+ EQA+ FE M E P
Sbjct: 436 LLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKP 494
Query: 412 NHVTFLAVLSACSYSGLSERGWEIFYSMSRD-HKV-------------KPRAMHYACMIE 457
+ T +L+ C+ G I + RD +K+ K R YA IE
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYA--IE 552
Query: 458 LL---------------------GREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGN 496
+ GR + E F L+ +P ++ +L AC G+
Sbjct: 553 VFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGH 612
Query: 497 LELG 500
+ELG
Sbjct: 613 VELG 616
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 173/368 (47%), Gaps = 26/368 (7%)
Query: 214 FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP 273
+ + R+ + L+ R++ S + F+ I+ Y KCG ++DA+ F++MP
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 274 EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQ 333
E+ WN++I A +G S+E ++ M G + + + V++ C + L +Q
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 334 AHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQ 393
H A+V++G+ ++ T++VD Y K M DAR VFD + + +SWN ++ Y G
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 394 GEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYA 453
++A+ MF +ML V P + T +V+ ACS S E G ++ ++++ V +
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG-KVIHAIAVKLSVVADTVVST 302
Query: 454 CMIELLGREGLLDEAFALIRRAPFEPTKNM----WVALLTACRMHGNLELGKFAAEKLYE 509
+ ++ + L+ A R F+ T++ W + ++ M G L + A E
Sbjct: 303 SVFDMYVKCDRLESA-----RRVFDQTRSKDLKSWTSAMSGYAMSG---LTREARELFDL 354
Query: 510 MDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCT--WI----------EV 557
M + ++ +L Y + + EA L TL R+ + + T WI ++
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFL-TLMRQEIENIDNVTLVWILNVCSGISDVQM 413
Query: 558 KKQPHAFL 565
KQ H F+
Sbjct: 414 GKQAHGFI 421
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 229/447 (51%), Gaps = 13/447 (2%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+ ++ VC +R V ++ GF+ D+ + + + KC + ARK+FG+M
Sbjct: 112 TFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEM 171
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
PER+ VSW ++ V SG+ EA +F M E N G GL++ G
Sbjct: 172 PERNAVSWTALVVAYVKSGELEEAKSMFDLM-PERNLGSWNALVD--------GLVKSGD 222
Query: 232 QIHSCALKMGVGGDSFVA-CALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
+++ L + ++ ++ID Y+K G + A+ F++ W+++I GYA +
Sbjct: 223 LVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQN 282
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR--HGFGSDIV 348
G EA ++ EM K D F + ++ C ++ E ++ + L + + F S V
Sbjct: 283 GQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYV 342
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
AL+D +K G M+ A +F+ M +++++S+ +++ G HG G +AI++FE+M+ E
Sbjct: 343 V-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG 401
Query: 409 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
++P+ V F +L C S L E G F M + + + HY+C++ LL R G L EA
Sbjct: 402 IVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEA 461
Query: 469 FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSS 528
+ LI+ PFE + W +LL C +HGN E+ + A L+E++P +YV+L NIY +
Sbjct: 462 YELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAAL 521
Query: 529 GKLKEAAGVLQTLKRKGLRMLPTCTWI 555
+ + A + + G+ + +WI
Sbjct: 522 DRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 38/320 (11%)
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSG-AKIDHFTISIVIRICVRLAS 327
F+++P T WN +I GY+ E +SI + M +G A+ D +T +V+++C
Sbjct: 66 FERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQ 125
Query: 328 LEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAG 387
+ H ++R GF D+V T+ VDFY K + AR VF M +N +SW AL+
Sbjct: 126 VRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVA 185
Query: 388 YGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 447
Y G+ E+A MF+ ++ ER N ++ A++ SG ++F M + +
Sbjct: 186 YVKSGELEEAKSMFD-LMPER---NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 241
Query: 448 RAM--HYACMIELLGREGLLDEAFALIRRA-------------PFE-------------- 478
+M YA +++ L +EA + RA P E
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 479 PTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVM--LLNIYNSSGKLKEAAG 536
P + + V L++AC G EL + L++ +YV+ L+++ G + AA
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAK 361
Query: 537 VLQTLKRKGLRMLPTCTWIE 556
+ + + ++ L + C+ +E
Sbjct: 362 LFEEMPQRDL--VSYCSMME 379
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 202/373 (54%), Gaps = 7/373 (1%)
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVG-GDSFVACALIDMYSKCGSIEDAQCAFDQ 271
TF ++ A VG+QIH +K GV D V ++ +Y + + DA+ FD+
Sbjct: 118 TFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDE 177
Query: 272 MPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA 331
+P+ V W+ ++ GY G E L ++ EM G + D F+++ + C ++ +L
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQG 237
Query: 332 KQAHAALVRHGF-GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGN 390
K H + + + SD+ TALVD Y+K G +E A VF+++ R+NV SW ALI GY
Sbjct: 238 KWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAA 297
Query: 391 HGQGEQAIQMFEQMLRERVI-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 449
+G ++A +++ RE I P+ V L VL+AC++ G E G + +M + + P+
Sbjct: 298 YGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKH 357
Query: 450 MHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYE 509
HY+C+++L+ R G LD+A LI + P +P ++W ALL CR H N+ELG+ A + L +
Sbjct: 358 EHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLD 417
Query: 510 MDPGKL----CNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFL 565
++ G + V L NIY S + EA V ++++G+R P + +EV F+
Sbjct: 418 LEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFV 477
Query: 566 CGDKSHTQTKEIY 578
GD SH +I+
Sbjct: 478 SGDVSHPNLLQIH 490
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 8/296 (2%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSG-FEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
T+ L+ C+ K++ +++ +G F D ++ VL ++V+ L+ DARK+F +
Sbjct: 118 TFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDE 177
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVG 230
+P+ DVV W ++ G V G SE +F M V + + T + A A +G + G
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQG 237
Query: 231 RQIHS-CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
+ IH K + D FV AL+DMY+KCG IE A F+++ + W ++I GYA
Sbjct: 238 KWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAA 297
Query: 290 HGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAAL-VRHGFGSDI 347
+GY+++A + + R+ G K D + V+ C LE + + R+G
Sbjct: 298 YGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKH 357
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVIS-WNALIAGYGNHGQ---GEQAIQ 399
+ +VD + GR++DA + ++M K + S W AL+ G H GE A+Q
Sbjct: 358 EHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQ 413
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/475 (19%), Positives = 192/475 (40%), Gaps = 64/475 (13%)
Query: 212 RTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED----AQC 267
+++ +++ AS ++ + HS + G+ +++ L+ + ++ A
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 268 AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM---RDSGAKIDHFTISIVIRICVR 324
FD + + ++++I + L +L M + + T +I C++
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 325 LASLEHAKQAHAALVRHG-FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
KQ H +V++G F SD T ++ Y + + DAR VFD + + +V+ W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
L+ GY G G + +++F++ML + P+ + L+AC+ G +G I + +
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 444 KVKPRAMHYACMIELLGREGLLDEAF----ALIRRAPF---------------------- 477
++ ++++ + G ++ A L RR F
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCL 308
Query: 478 ---------EPTKNMWVALLTACRMHGNLELGKFAAEKL---YEMDPGKLCNYVMLLNIY 525
+P + + +L AC G LE G+ E + Y + P K +Y ++++
Sbjct: 309 DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITP-KHEHYSCIVDLM 367
Query: 526 NSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEIL 585
+G+L +A +++ + K L W A L G ++H + V +L
Sbjct: 368 CRAGRLDDALDLIEKMPMKPL----ASVW-------GALLNGCRTHKNVELGELAVQNLL 416
Query: 586 DEISRHGYIKENEMLLPDVDEEEQRLQQ----YHSEKLAIAFGLINTPDWTPLQI 636
D G ++E E L + +Q+ + + G+ TP W+ L++
Sbjct: 417 D--LEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEV 469
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 225/449 (50%), Gaps = 35/449 (7%)
Query: 164 ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAG 223
A K + + W VI G +S + ++ +++ M T+ ++++S+
Sbjct: 61 AYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSR 120
Query: 224 LGLIQVGRQIHSCALKMGVGGDSFVACALI------------------------------ 253
L ++G +H +K G+ D F+ LI
Sbjct: 121 LSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSI 180
Query: 254 -DMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM-RDSGAKID 311
D Y+K G + A+ FD+M E+ V W+S+I GY G +AL I+ +M R +K +
Sbjct: 181 LDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKAN 240
Query: 312 HFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
T+ VI C L +L K H ++ ++ T+L+D Y+K G + DA VF
Sbjct: 241 EVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFY 300
Query: 372 RMHRK--NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLS 429
R K + + WNA+I G +HG +++Q+F +M ++ P+ +TFL +L+ACS+ GL
Sbjct: 301 RASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLV 360
Query: 430 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLT 489
+ W F S+ ++ +P++ HYACM+++L R GL+ +A I P +PT +M ALL
Sbjct: 361 KEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLN 419
Query: 490 ACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRML 549
C HGNLEL + +KL E+ P YV L N+Y + + + A + + +++KG++ +
Sbjct: 420 GCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKI 479
Query: 550 PTCTWIEVKKQPHAFLCGDKSHTQTKEIY 578
+ +++ H F+ DK+H + +IY
Sbjct: 480 AGHSILDLDGTRHRFIAHDKTHFHSDKIY 508
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 4/214 (1%)
Query: 89 HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMM 148
+ +A+E+F+ + G + T +++ C L ++ K V Y++ + +
Sbjct: 221 YNKALEIFDQMMRMGS-SKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ 279
Query: 149 NRVLLMHVKCGLMLDARKLF--GDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
++ M+ KCG + DA +F + E D + W +IGGL G E+ LF M
Sbjct: 280 TSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESK 339
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
D TF ++ A + GL++ + G S ++D+ S+ G ++DA
Sbjct: 340 IDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAH 399
Query: 267 CAFDQMPEKTTVG-WNSIIAGYALHGYSEEALSI 299
+MP K T +++ G HG E A ++
Sbjct: 400 DFISEMPIKPTGSMLGALLNGCINHGNLELAETV 433
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 219 bits (557), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 199/397 (50%), Gaps = 3/397 (0%)
Query: 137 ISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER-DVVSWMTVIGGLVDSGDYSEA 195
+ SGF + N ++ + CG + DARK+F +MP+ D V++ T++ G + + A
Sbjct: 152 LRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALA 211
Query: 196 FGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDM 255
LF M T + + A + LG + H +K+G+ D + ALI M
Sbjct: 212 LDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGM 271
Query: 256 YSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTI 315
Y K G I A+ FD K V WN +I YA G EE + + +M+ K + T
Sbjct: 272 YGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTF 331
Query: 316 SIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHR 375
++ C + + L D + TALVD Y+K G +E A +F+RM
Sbjct: 332 VGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKD 391
Query: 376 KNVISWNALIAGYGNHGQGEQAIQMFEQMLRE--RVIPNHVTFLAVLSACSYSGLSERGW 433
K+V SW A+I+GYG HG +A+ +F +M E +V PN +TFL VL+ACS+ GL G
Sbjct: 392 KDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGI 451
Query: 434 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRM 493
F M + P+ HY C+++LLGR G L+EA+ LIR P W ALL ACR+
Sbjct: 452 RCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRV 511
Query: 494 HGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGK 530
+GN +LG+ +L EM + ++L + +G
Sbjct: 512 YGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN 548
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 186/384 (48%), Gaps = 10/384 (2%)
Query: 116 LVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDAR---KLFGDMP 172
L+N R V ++ YM+ +G + D + ++++L +LD R +F +
Sbjct: 31 LINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSS----VLDIRYASSIFEHVS 86
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQ 232
++ + T+I G S + AF +F + + +F T +++ + + +G
Sbjct: 87 NTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEG 146
Query: 233 IHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKT-TVGWNSIIAGYALHG 291
+H AL+ G + + ALI Y CG I DA+ FD+MP+ V +++++ GY
Sbjct: 147 LHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVS 206
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
AL ++ MR S ++ T+ + L L A+ AH ++ G D+ T
Sbjct: 207 KKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLIT 266
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
AL+ Y K G + AR +FD RK+V++WN +I Y G E+ + + QM E++ P
Sbjct: 267 ALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKP 326
Query: 412 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 471
N TF+ +LS+C+YS + G + + + ++ A+ ++++ + GLL++A +
Sbjct: 327 NSSTFVGLLSSCAYSEAAFVGRTV-ADLLEEERIALDAILGTALVDMYAKVGLLEKAVEI 385
Query: 472 IRRAPFEPTKNMWVALLTACRMHG 495
R + K+ W A+++ HG
Sbjct: 386 FNRMKDKDVKS-WTAMISGYGAHG 408
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 147/320 (45%), Gaps = 9/320 (2%)
Query: 92 AMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRV 151
A++LF I+ +V ST + ++ L + G + I G + DL+++ +
Sbjct: 211 ALDLFRIMRKSEVVVNV--STLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITAL 268
Query: 152 LLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRS 211
+ M+ K G + AR++F +DVV+W +I +G E L M E S
Sbjct: 269 IGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNS 328
Query: 212 RTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQ 271
TF ++ + A VGR + + + D+ + AL+DMY+K G +E A F++
Sbjct: 329 STFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNR 388
Query: 272 MPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI--DHFTISIVIRICVRLASLE 329
M +K W ++I+GY HG + EA++++ +M + K+ + T +V+ C +
Sbjct: 389 MKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVM 448
Query: 330 HAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH-RKNVISWNALIAG 387
+ +V + F + +VD + G++E+A + + + +W AL+A
Sbjct: 449 EGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAA 508
Query: 388 ---YGNHGQGEQAIQMFEQM 404
YGN GE + +M
Sbjct: 509 CRVYGNADLGESVMMRLAEM 528
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 222/418 (53%), Gaps = 3/418 (0%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER-DVVSWMTVIGGLVD 188
K ++I F D + N +L M+ K L+ A KLF + E + +W T++ G
Sbjct: 351 KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGK 410
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV 248
+ + LF + + S + +++ + + +G + +G+ +H +K + V
Sbjct: 411 MKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV 470
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
+LID+Y K G + A F + + + WN++IA Y SE+A++++ M
Sbjct: 471 VNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENF 529
Query: 309 KIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARH 368
K T+ ++ CV SLE + H + ++ + AL+D Y+K G +E +R
Sbjct: 530 KPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRE 589
Query: 369 VFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGL 428
+FD ++K+ + WN +I+GYG HG E AI +F+QM V P TFLA+LSAC+++GL
Sbjct: 590 LFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGL 649
Query: 429 SERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALL 488
E+G ++F M + + VKP HY+C+++LL R G L+EA + + PF P +W LL
Sbjct: 650 VEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLL 708
Query: 489 TACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
++C HG E+G AE+ DP Y+ML N+Y+++GK +EA + ++ G+
Sbjct: 709 SSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGV 766
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 198/437 (45%), Gaps = 47/437 (10%)
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF 199
GF+ + + + + KCG + DA +F +MP+RDVV+W +I G V +G+ G
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 200 LFMWVEFND---GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMY 256
M +D RT +A + LG ++ GR +H A+K G+ FV ++ Y
Sbjct: 216 CKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFY 275
Query: 257 SKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTIS 316
SK G+ +A +F ++ ++ W SIIA A G EE+ ++ EM++ G D IS
Sbjct: 276 SKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVIS 335
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
+I ++ + K H ++RH F D +L+ Y K+ + A +F R+ +
Sbjct: 336 CLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEE 395
Query: 377 -NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
N +WN ++ GYG + I++F ++ + + + +V+S+CS+ G G +
Sbjct: 396 GNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL 455
Query: 436 F-YSMSRDHKVKPRAMHYACMIELLGREGLL----------------------------- 465
Y + + ++ +I+L G+ G L
Sbjct: 456 HCYVVKTSLDLTISVVN--SLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQ 513
Query: 466 -DEAFALIRR---APFEPTKNMWVALLTACRMHGNLELG----KFAAEKLYEMDPGKLCN 517
++A AL R F+P+ V LL AC G+LE G ++ E +EM+ L
Sbjct: 514 SEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMN---LSL 570
Query: 518 YVMLLNIYNSSGKLKEA 534
L+++Y G L+++
Sbjct: 571 SAALIDMYAKCGHLEKS 587
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 214/466 (45%), Gaps = 38/466 (8%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T + C L +++ + + + + +G ++ + + + K G +A F ++
Sbjct: 232 TLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL 291
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
+ D+ SW ++I L SGD E+F +F M + + ++ + L+ G+
Sbjct: 292 GDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGK 351
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK-TTVGWNSIIAGYALH 290
H ++ DS V +L+ MY K + A+ F ++ E+ WN+++ GY
Sbjct: 352 AFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKM 411
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
+ + ++ ++++ G +ID + + VI C + ++ K H +V+ I
Sbjct: 412 KCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVV 471
Query: 351 TALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI 410
+L+D Y K G + A +F NVI+WNA+IA Y + Q E+AI +F++M+ E
Sbjct: 472 NSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFK 530
Query: 411 PNHVTFLAVLSACSYSGLSERGWEIF-YSMSRDHKV-------------------KPR-- 448
P+ +T + +L AC +G ERG I Y +H++ K R
Sbjct: 531 PSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSREL 590
Query: 449 --------AMHYACMIELLGREGLLDEAFAL---IRRAPFEPTKNMWVALLTACRMHGNL 497
A+ + MI G G ++ A AL + + +PT ++ALL+AC G +
Sbjct: 591 FDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLV 650
Query: 498 ELGK--FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
E GK F Y++ P L +Y L+++ + SG L+EA + ++
Sbjct: 651 EQGKKLFLKMHQYDVKP-NLKHYSCLVDLLSRSGNLEEAESTVMSM 695
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 171/381 (44%), Gaps = 15/381 (3%)
Query: 117 VNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDV 176
V +C S+ ++K +I+ G ++++ ++++ + G + ++F + RD+
Sbjct: 31 VILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDI 90
Query: 177 VSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSC 236
W ++I +GDY+ + F M + T +V A A L VG +H
Sbjct: 91 FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL 150
Query: 237 ALKM-GVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEE 295
LK G ++ V + + YSKCG ++DA FD+MP++ V W +II+G+ +G SE
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEG 210
Query: 296 ALSIYLEMRDSGAKIDH---FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTA 352
L +M +G+ +D T+ + C L +L+ + H V++G S ++
Sbjct: 211 GLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSS 270
Query: 353 LVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPN 412
+ FYSK G +A F + +++ SW ++IA G E++ MF +M + + P+
Sbjct: 271 MFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPD 330
Query: 413 HVTFLAVLSACSY-----SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 467
V +++ G + G+ I + S D V + C E LL
Sbjct: 331 GVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFE------LLSV 384
Query: 468 AFALIRRAPFEPTKNMWVALL 488
A L R E K W +L
Sbjct: 385 AEKLFCRISEEGNKEAWNTML 405
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 6/272 (2%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALH 290
R+ ++ + G+ + FVA LI Y+ G + F + + WNSII + +
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSN 103
Query: 291 GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH-GFGSDIVA 349
G +L + M SG DHFT +V+ C L H +++H GF +
Sbjct: 104 GDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAV 163
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML---R 406
+ V FYSK G ++DA VFD M ++V++W A+I+G+ +G+ E + +M
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGS 223
Query: 407 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 466
+ PN T ACS G + G + + + + + M + G
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPS 282
Query: 467 EAFALIRRAPFEPTKNMWVALLTACRMHGNLE 498
EA+ R E + W +++ + G++E
Sbjct: 283 EAYLSFRELGDEDMFS-WTSIIASLARSGDME 313
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 58/108 (53%)
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
I + +C + SLE ++ +A ++ G +I + L+ Y+ +G+ + VF + R+
Sbjct: 29 ISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRR 88
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS 424
++ WN++I + ++G +++ F ML P+H T V+SAC+
Sbjct: 89 DIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACA 136
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 197/404 (48%), Gaps = 22/404 (5%)
Query: 286 GYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGS 345
+ HG ++AL + +D + + +IC L+ AK H +
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
D+ +N L++ YS G +A VF++M KN+ +W +I + +G GE AI MF +
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 406 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 465
E IP+ F + AC G + G F SMSRD+ + P Y ++E+ G L
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 466 DEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCN-----YVM 520
DEA + R P EP ++W L+ R+HGNLELG + AE + +DP +L ++
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIP 467
Query: 521 LLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQK 580
+ LK+ +G+L VK F GD + + E++Q
Sbjct: 468 VKASDVEKESLKKRSGILHG----------------VKSSMQEFRAGDTNLPENDELFQL 511
Query: 581 VDEILDEISRHGYIKENEMLLPDVDEE-EQRLQQYHSEKLAIAFGLINTPDWTPLQITQG 639
+ + + GY+ E M L D+D+E ++ L HSE++A A ++N+ P + +
Sbjct: 512 LRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKN 571
Query: 640 HRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
RVC DCHNA+K+++ + GRE++ RD RFH +N C+C DYW
Sbjct: 572 LRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 251 ALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI 310
L++MYS CG +A F++M EK W II +A +G+ E+A+ ++ ++ G
Sbjct: 294 VLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIP 353
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHV 369
D + C L ++ ++ R +G I +LV+ Y+ G +++A
Sbjct: 354 DGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEF 413
Query: 370 FDRM-HRKNVISWNALIAGYGNHGQGE 395
+RM NV W L+ HG E
Sbjct: 414 VERMPMEPNVDVWETLMNLSRVHGNLE 440
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 245/498 (49%), Gaps = 38/498 (7%)
Query: 129 VKKVFNYMISSG-FEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLV 187
VK++ ++I SG Y+ N ++ +++ G A K+F MP DV S+ +I G
Sbjct: 149 VKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYA 208
Query: 188 DSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMG--VGGD 245
G EA L+ M + + T +++ L I++G+ +H + G +
Sbjct: 209 KQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN 268
Query: 246 SFVACALIDMYSKC-------------------------------GSIEDAQCAFDQMPE 274
++ AL+DMY KC G +E AQ FDQMP+
Sbjct: 269 LILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK 328
Query: 275 KTTVGWNSIIAGYALHGYSEEAL-SIYLEMRD-SGAKIDHFTISIVIRICVRLASLEHAK 332
+ V WNS++ GY+ G + + ++ EM K D T+ +I L H +
Sbjct: 329 RDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGR 388
Query: 333 QAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHG 392
H ++R D ++AL+D Y K G +E A VF K+V W ++I G HG
Sbjct: 389 WVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHG 448
Query: 393 QGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 452
G+QA+Q+F +M E V PN+VT LAVL+ACS+SGL E G +F M P HY
Sbjct: 449 NGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHY 508
Query: 453 ACMIELLGREGLLDEAFALI-RRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMD 511
+++LL R G ++EA ++ ++ P P+++MW ++L+ACR ++E + A +L +++
Sbjct: 509 GSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLE 568
Query: 512 PGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDK-S 570
P K YV+L NIY + G+ + + ++ +G++ + + + H F+ +K +
Sbjct: 569 PEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQN 628
Query: 571 HTQTKEIYQKVDEILDEI 588
H + EI + + + +E+
Sbjct: 629 HPRWTEIKRILQHLYNEM 646
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 203/371 (54%), Gaps = 13/371 (3%)
Query: 206 FNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDA 265
F D S FA V ++ + GRQIH+ K+G + +L+ YS G ++ A
Sbjct: 61 FVDSFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYA 119
Query: 266 QCAFDQMPEK-TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
+ FD+ PEK V W ++I+ Y + S EA+ ++ M ++D +++ + C
Sbjct: 120 RQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACAD 179
Query: 325 LASLEHAKQAHAALVRHG--FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWN 382
L +++ ++ ++ ++ D+ +L++ Y K G E AR +FD RK+V ++
Sbjct: 180 LGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYT 239
Query: 383 ALIAGYGNHGQGEQAIQMFEQML-----RERVI-PNHVTFLAVLSACSYSGLSERGWEIF 436
++I GY +GQ ++++++F++M ++ VI PN VTF+ VL ACS+SGL E G F
Sbjct: 240 SMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHF 299
Query: 437 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGN 496
SM D+ +KPR H+ CM++L R G L +A I + P +P +W LL AC +HGN
Sbjct: 300 KSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGN 359
Query: 497 LELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIE 556
+ELG+ +++E+D + +YV L NIY S G E + + +++ R +P +WIE
Sbjct: 360 VELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWIE 416
Query: 557 VKKQPHAFLCG 567
+ + F+ G
Sbjct: 417 LGSIINEFVSG 427
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSG--FEPDLYMM 148
EA+ELF+ +E + ++ ++ C L +++ +++++ I DL +
Sbjct: 150 EAIELFK--RMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLR 207
Query: 149 NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFM------ 202
N +L M+VK G ARKLF + +DV ++ ++I G +G E+ LF M
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQS 267
Query: 203 ---WVEFNDGRSRTFATMVRASAGLGLIQVG-RQIHSCALKMGVGGDSFVACALIDMYSK 258
+ ND TF ++ A + GL++ G R S + + ++D++ +
Sbjct: 268 QDTVITPND---VTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCR 324
Query: 259 CGSIEDAQCAFDQMPEK-TTVGWNSIIAGYALHGYSE 294
G ++DA +QMP K TV W +++ +LHG E
Sbjct: 325 SGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 224/456 (49%), Gaps = 12/456 (2%)
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF 199
GF D+Y+ V+ M+ K G M AR F +MP R VSW +I G + G+ A LF
Sbjct: 108 GFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF 167
Query: 200 LFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVA-CALIDMYSK 258
D ++ + G ++ G + L + + + +I Y
Sbjct: 168 --------DQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCN 219
Query: 259 CGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA-KIDHFTISI 317
I+ A+ FD MPE+ V WN++I GY + +E + ++ EM+ + + D TI
Sbjct: 220 IKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILS 279
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKN 377
V+ +L + H + R + TA++D YSK G +E A+ +FD M K
Sbjct: 280 VLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ 339
Query: 378 VISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFY 437
V SWNA+I GY +G A+ +F M+ E P+ +T LAV++AC++ GL E G + F+
Sbjct: 340 VASWNAMIHGYALNGNARAALDLFVTMMIEEK-PDEITMLAVITACNHGGLVEEGRKWFH 398
Query: 438 SMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNL 497
M R+ + + HY CM++LLGR G L EA LI PFEP + + L+AC + ++
Sbjct: 399 VM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDI 457
Query: 498 ELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEV 557
E + +K E++P NYV+L N+Y + + + V +++ + C+ IE+
Sbjct: 458 ERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEI 517
Query: 558 KKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGY 593
F+ GD +H + I+ + ++L ++ Y
Sbjct: 518 NYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 200/446 (44%), Gaps = 51/446 (11%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMT--VIGGLVDSGDYS 193
M+ E ++ + + L++ + ARKLF P+RD S+++ +I +++ Y
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDD-SFLSNSMIKAYLETRQYP 59
Query: 194 EAFGLFLFMWVEFNDGRSR-TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACAL 252
++F L+ + E TF T+ ++ + + G Q+HS + G D +V+ +
Sbjct: 60 DSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 253 IDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDH 312
+DMY+K G + A+ AFD+MP ++ V W ++I+GY G + A ++ +M D
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DV 176
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
+ ++ V+ + A++ + ++ T ++ Y ++ AR +FD
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTH----KTVITWTTMIHGYCNIKDIDAARKLFDA 232
Query: 373 MHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI-PNHVTFLAVLSACSYSG-LS- 429
M +N++SWN +I GY + Q ++ I++F++M + P+ VT L+VL A S +G LS
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 430 ---------------------------------ERGWEIFYSMSRDHKVKPRAMHYACMI 456
E+ IF M AM + +
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 457 ELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMD-PGKL 515
R L +I P E T +A++TAC G +E G+ + EM K+
Sbjct: 353 NGNARAALDLFVTMMIEEKPDEITM---LAVITACNHGGLVEEGRKWFHVMREMGLNAKI 409
Query: 516 CNYVMLLNIYNSSGKLKEAAGVLQTL 541
+Y ++++ +G LKEA ++ +
Sbjct: 410 EHYGCMVDLLGRAGSLKEAEDLITNM 435
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 145/301 (48%), Gaps = 15/301 (4%)
Query: 113 YDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGL--MLDARKLFGD 170
Y+A+++ V + +++F+ M ++ ++H C + + ARKLF
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMTHKT------VITWTTMIHGYCNIKDIDAARKLFDA 232
Query: 171 MPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN-DGRSRTFATMVRASAGLGLIQV 229
MPER++VSW T+IGG + E LF M + D T +++ A + G + +
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
G H + + V A++DMYSKCG IE A+ FD+MPEK WN++I GYAL
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
+G + AL +++ M K D T+ VI C +E ++ + G + I
Sbjct: 353 NGNARAALDLFVTMMIE-EKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEH 411
Query: 350 NTALVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
+VD + G +++A + M N I ++ ++ G + E+A E++L++
Sbjct: 412 YGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERA----ERILKKA 467
Query: 409 V 409
V
Sbjct: 468 V 468
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 236/491 (48%), Gaps = 47/491 (9%)
Query: 94 ELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLL 153
+L + +L+ DC T L++ +++ K+V Y I FE D+ + + V+
Sbjct: 364 QLMRLEKLKYDCV-----TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMD 418
Query: 154 MHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRT 213
M+ KCG ++DA+K+F E+D++ W T++ +SG EA LF M +E
Sbjct: 419 MYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE-------- 470
Query: 214 FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP 273
GV + +I + G +++A+ F QM
Sbjct: 471 ---------------------------GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 274 EK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
+ W +++ G +G SEEA+ +M++SG + + F+I++ + C LASL
Sbjct: 504 SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLH 563
Query: 330 HAKQAHAALVRHGFGSDIVA-NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
+ H ++R+ S +V+ T+LVD Y+K G + A VF + NA+I+ Y
Sbjct: 564 IGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAY 623
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 448
+G ++AI ++ + + P+++T VLSAC+++G + EIF + +KP
Sbjct: 624 ALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPC 683
Query: 449 AMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLY 508
HY M++LL G ++A LI PF+P M +L+ +C EL + + KL
Sbjct: 684 LEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLL 743
Query: 509 EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQP--HAFLC 566
E +P NYV + N Y G E + + +K KGL+ P C+WI++ + H F+
Sbjct: 744 ESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVA 803
Query: 567 GDKSHTQTKEI 577
DK+HT+ EI
Sbjct: 804 NDKTHTRINEI 814
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 205/385 (53%), Gaps = 4/385 (1%)
Query: 120 CVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSW 179
C L+ R + V Y++ SG E +++ + + M+ KCG++ DA K+F ++P+R+ V+W
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAW 242
Query: 180 MTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALK 239
++ G V +G EA LF M + + T +T + ASA +G ++ G+Q H+ A+
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 240 MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSI 299
G+ D+ + +L++ Y K G IE A+ FD+M EK V WN II+GY G E+A+ +
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 300 YLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSK 359
MR K D T++ ++ R +L+ K+ +RH F SDIV + ++D Y+K
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAK 422
Query: 360 WGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAV 419
G + DA+ VFD K++I WN L+A Y G +A+++F M E V PN +T+ +
Sbjct: 423 CGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLI 482
Query: 420 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR---AP 476
+ + +G + ++F M + + P + + M+ + + G +EA +R+ +
Sbjct: 483 ILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 541
Query: 477 FEPTKNMWVALLTACRMHGNLELGK 501
P L+AC +L +G+
Sbjct: 542 LRPNAFSITVALSACAHLASLHIGR 566
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 189/373 (50%), Gaps = 4/373 (1%)
Query: 65 DAQIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLR 124
D Q PS+ ++ L +EA+ L + E++ +G Y ++ CV R
Sbjct: 27 DEQAHSPSSTSYFHRVSSLCKNGEIKEALSL--VTEMDFRNLRIGPEIYGEILQGCVYER 84
Query: 125 SIRGVKKVFNYMISSG--FEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTV 182
+ K++ ++ +G + + Y+ ++++ + KC + A LF + R+V SW +
Sbjct: 85 DLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAI 144
Query: 183 IGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGV 242
IG G A F+ M + + +A L + GR +H +K G+
Sbjct: 145 IGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL 204
Query: 243 GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLE 302
FVA +L DMY KCG ++DA FD++P++ V WN+++ GY +G +EEA+ ++ +
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
MR G + T+S + + +E KQ+HA + +G D + T+L++FY K G
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
+E A VFDRM K+V++WN +I+GY G E AI M + M E++ + VT ++SA
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 423 CSYSGLSERGWEI 435
+ + + G E+
Sbjct: 385 AARTENLKLGKEV 397
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 160/601 (26%), Positives = 272/601 (45%), Gaps = 117/601 (19%)
Query: 84 GLCN--RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGF 141
LC+ R +A+ELF+ + + +++ LV + + K+VF+ M S
Sbjct: 147 ALCDDGRSEDAVELFD------EMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR-- 198
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFL- 200
D+ N ++ +++ M +A+ LFGDM E++VV+W +++ G GD EA+ LF
Sbjct: 199 --DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCE 256
Query: 201 ---------------FMW-----------------VEFNDGRSRTFATMVRASAGLGL-- 226
F W V+ T ++ A GLG+
Sbjct: 257 MPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEF 316
Query: 227 IQVGRQIHSCALKMG---VGGDSFVACALIDMYS-------------------------- 257
++G Q+H+ + G V D +A +L+ MY+
Sbjct: 317 RRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIIN 376
Query: 258 ---KCGSIEDAQCAFDQMPE-KTTVGWNSIIAGYALHGYSEEALSIYLEMRDS------- 306
K G +E A+ F+++ V W S+I GY G A ++ ++ D
Sbjct: 377 RYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTV 436
Query: 307 ------------------------GAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
G K + T S+++ ++L+ K H + +
Sbjct: 437 MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTT 496
Query: 343 --FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQM 400
+ D++ +LV Y+K G +EDA +F +M +K+ +SWN++I G +HG ++A+ +
Sbjct: 497 ACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNL 556
Query: 401 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 460
F++ML PN VTFL VLSACS+SGL RG E+F +M + ++P HY MI+LLG
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLG 616
Query: 461 REGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE----LGKFAAEKLYEMDPGKLC 516
R G L EA I PF P ++ ALL C ++ + + + AA +L E+DP
Sbjct: 617 RAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAP 676
Query: 517 NYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKE 576
+V L N+Y G+ + + + KG++ P C+W+ V + + FL GDKS ++ +
Sbjct: 677 GHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQ 736
Query: 577 I 577
+
Sbjct: 737 M 737
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 197/454 (43%), Gaps = 77/454 (16%)
Query: 142 EPDLYMMNRVLLMHVKC------------------------------GLMLDARKLFGDM 171
E ++ N +L +VKC G DA +LF +M
Sbjct: 105 ERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEM 164
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR---TFATMVRASAGLGLIQ 228
PER+VVSW T++ GL+ +GD +A +F M SR ++ M++ G I+
Sbjct: 165 PERNVVSWNTLVTGLIRNGDMEKAKQVFDAM-------PSRDVVSWNAMIK-----GYIE 212
Query: 229 VGRQIHSCALKMGVGGDSFVA--CALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAG 286
+ L G + V +++ Y + G + +A F +MPE+ V W ++I+G
Sbjct: 213 -NDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISG 271
Query: 287 YALHGYSEEALSIYLEMR---DSGAKIDHFTISIVIR---ICVRLASLEHAKQAHAALVR 340
+A + EAL ++LEM+ D+ + IS+ + V L +Q HA ++
Sbjct: 272 FAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRL--GEQLHAQVIS 329
Query: 341 HGFGS---DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQA 397
+G+ + D +LV Y+ G + A+ + + ++ S N +I Y +G E+A
Sbjct: 330 NGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF--DLQSCNIIINRYLKNGDLERA 387
Query: 398 IQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIE 457
+FE R + + + V++ +++ +G R + +F + V + MI
Sbjct: 388 ETLFE---RVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----WTVMIS 439
Query: 458 LLGREGLLDEAFALIR---RAPFEPTKNMWVALLTACRMHGNLELGK----FAAEKLYEM 510
L + L EA +L+ R +P + + LL++ NL+ GK A+
Sbjct: 440 GLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACY 499
Query: 511 DPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
DP + L+++Y G +++A + + +K
Sbjct: 500 DPDLILQNS-LVSMYAKCGAIEDAYEIFAKMVQK 532
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 40/236 (16%)
Query: 251 ALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR------ 304
+L+ Y+K G +++A+ F+ MPE+ V N+++ GY EA +++ EM
Sbjct: 82 SLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSW 141
Query: 305 --------DSGAKIDHFTI------------SIVIRICVRLASLEHAKQAHAALVRHGFG 344
D G D + + ++ +R +E AKQ A+
Sbjct: 142 TVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR--- 198
Query: 345 SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
D+V+ A++ Y + ME+A+ +F M KNV++W +++ GY +G +A ++F +M
Sbjct: 199 -DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
Query: 405 LRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD-HKVKPR-----AMHYAC 454
ER N V++ A++S +++ L +F M +D V P ++ YAC
Sbjct: 258 -PER---NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 211/413 (51%), Gaps = 34/413 (8%)
Query: 176 VVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN-DGRSRTFATMVRASAGLGLIQVGRQIH 234
++S + + G++ +A LFL M F + F+ +++ A +G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 235 SCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSE 294
+ ++K + FV CAL+DMY KC S+ A+ FD++P++ V WN++I+ Y G +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 295 EALSIYLEM------------------RDSGA---------------KIDHFTISIVIRI 321
EA+ +Y M + G+ K + T+ ++
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 322 CVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISW 381
C + + K+ H+ R+ + LV+ Y + G + + VFD M ++V++W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 441
++LI+ Y HG E A++ F++M +V P+ + FL VL ACS++GL++ F M
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 442 DHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGK 501
D+ ++ HY+C++++L R G +EA+ +I+ P +PT W ALL ACR +G +EL +
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAE 371
Query: 502 FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTW 554
AA +L ++P NYV+L IY S G+ +EA + +K G+++ P +W
Sbjct: 372 IAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 164/386 (42%), Gaps = 53/386 (13%)
Query: 76 LCSQIEKLGLCNRHREAMELFEILELEGDCA-DVGASTYD-ALVNVCVGLRSIRGVKKVF 133
L Q+ H +A+ LF L++ A + A + AL + R + G V
Sbjct: 15 LTKQLSSYANQGNHEQALNLF--LQMHSSFALPLDAHVFSLALKSCAAAFRPVLG-GSVH 71
Query: 134 NYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYS 193
+ + S F + ++ +L M+ KC + ARKLF ++P+R+ V W +I G
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 194 EAFGLFLFMWV-----EFN----------DGRSR------------------TFATMVRA 220
EA L+ M V FN DG R T +V A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 221 SAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGW 280
+ +G ++ ++IHS A + + + L++ Y +CGSI Q FD M ++ V W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 281 NSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR 340
+S+I+ YALHG +E AL + EM + D V++ C HA A ALV
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKAC------SHAGLADEALVY 305
Query: 341 -------HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-NVISWNALIAGYGNHG 392
+G + + LVD S+ GR E+A V M K +W AL+ N+G
Sbjct: 306 FKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 393 QGEQA-IQMFEQMLRERVIPNHVTFL 417
+ E A I E ++ E P + L
Sbjct: 366 EIELAEIAARELLMVEPENPANYVLL 391
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 226/422 (53%), Gaps = 18/422 (4%)
Query: 117 VNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD-ARKLFGDMPERD 175
+N+ +S++ +K++ +I+ G Y +++ L+H+ + L A + +P
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSK--LLHLSSTVCLSYALSILRQIPNPS 70
Query: 176 VVSWMTVIGGLVDSGDYSE---AFGLF---LFMWVEFNDGRSRTFATMVRASA-GLGLIQ 228
V + T+I +V + + ++ AF L+ L F T+ ++ +AS +
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 229 VGRQIHSCALKM--GVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAG 286
GR +H+ LK V D FV AL+ Y+ CG + +A+ F+++ E WN+++A
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 287 YALH---GYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
YA EE L +++ M+ + + ++ +I+ C L AH ++++
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNL 247
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQ 403
+ T+L+D YSK G + AR VFD M +++V +NA+I G HG G++ I++++
Sbjct: 248 TLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKS 307
Query: 404 MLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 463
++ + ++P+ TF+ +SACS+SGL + G +IF SM + ++P+ HY C+++LLGR G
Sbjct: 308 LISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 464 LLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLN 523
L+EA I++ P +P +W + L + + HG+ E G+ A + L ++ NYV+L N
Sbjct: 368 RLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSN 427
Query: 524 IY 525
IY
Sbjct: 428 IY 429
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 231/441 (52%), Gaps = 17/441 (3%)
Query: 121 VGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWM 180
VGL S G ++ E + N +L +++ G + +AR++F +PE+D VSW
Sbjct: 146 VGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWN 205
Query: 181 TVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKM 240
+I GD A LF M ++ ++ ++ +++ R +
Sbjct: 206 LIISSYAKKGDMGNACSLFSAMPLK----SPASWNILIGGYVNCREMKLARTYFDAMPQK 261
Query: 241 GVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIY 300
G S++ +I Y+K G ++ A+ F M +K + ++++IA Y +G ++AL ++
Sbjct: 262 N--GVSWIT--MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLF 317
Query: 301 LEM--RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYS 358
+M R+S + D T+S V+ +L + + + HG D + +T+L+D Y
Sbjct: 318 AQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYM 377
Query: 359 KWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLA 418
K G A +F +++K+ +S++A+I G G +G +A +F M+ +++ PN VTF
Sbjct: 378 KGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTG 437
Query: 419 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE 478
+LSA S+SGL + G++ F SM +DH ++P A HY M+++LGR G L+EA+ LI+ P +
Sbjct: 438 LLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQ 496
Query: 479 PTKNMWVALLTACRMHGNLELGKFAAEKL--YEMDP-GKLCNYVMLLNIYNSSGKLKEAA 535
P +W ALL A +H N+E G+ A E DP G L + M IY+S G+ +A
Sbjct: 497 PNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAM---IYSSVGRWDDAR 553
Query: 536 GVLQTLKRKGLRMLPTCTWIE 556
V ++K K L C+W+E
Sbjct: 554 TVRDSIKEKKLCKTLGCSWVE 574
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 185/409 (45%), Gaps = 28/409 (6%)
Query: 165 RKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGL 224
+++ D SW ++ L + E +++ M S +++RA +
Sbjct: 58 KRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 225 GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSII 284
+ G+ IH+ ALK G+ G +V L+ +YS+ G IE A+ AFD + EK TV WNS++
Sbjct: 118 ENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLL 177
Query: 285 AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR------ICVRLASLEHAKQAHAAL 338
GY G +EA ++ ++ + A + IS + C +++ A +
Sbjct: 178 HGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI 237
Query: 339 VRHGF-----------------GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISW 381
+ G+ + V+ ++ Y+K G ++ A +F M +K+ + +
Sbjct: 238 LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVY 297
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRER--VIPNHVTFLAVLSACSYSGLSERGWEIFYSM 439
+A+IA Y +G+ + A+++F QML + P+ +T +V+SA S G + G + S
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV-ESY 356
Query: 440 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHG-NLE 498
+H +K + +I+L + G +AF + + T + + A++ C ++G E
Sbjct: 357 ITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS-YSAMIMGCGINGMATE 415
Query: 499 LGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
+ + P + + LL+ Y+ SG ++E ++K L
Sbjct: 416 ANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLE 464
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 144/328 (43%), Gaps = 42/328 (12%)
Query: 277 TVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHA 336
+ W ++ + H +E + +Y++M +SG ++ V+R C ++ ++ K HA
Sbjct: 69 SFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 337 ALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQ 396
+++G + T LV YS+ G +E A+ FD + KN +SWN+L+ GY G+ ++
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE 188
Query: 397 AIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMI 456
A ++F+++ + + V++ ++S+ + G +F +M P + +
Sbjct: 189 ARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLK---SPASWNI---- 237
Query: 457 ELLGREGLLDEAFALIRRAPFE--PTKN--MWVALLTACRMHGNLELGKFAAEKLYE-MD 511
L+G G ++ + R F+ P KN W+ +++ G+++ +AE+L+ M
Sbjct: 238 -LIG--GYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQ----SAEELFRLMS 290
Query: 512 PGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPT-------------------C 552
Y ++ Y +GK K+A + + + + P
Sbjct: 291 KKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG 350
Query: 553 TWIEVKKQPHAFLCGDKSHTQTKEIYQK 580
TW+E H D T ++Y K
Sbjct: 351 TWVESYITEHGIKIDDLLSTSLIDLYMK 378
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 225/441 (51%), Gaps = 3/441 (0%)
Query: 126 IRGVKKVFNYMISSGFEP-DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIG 184
+R +++ I SG +L + N V+ M+ + G+ A +F M +RDVVSW +I
Sbjct: 149 VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLIL 208
Query: 185 GLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGG 244
DSG+ A F M T + +V + L + G+Q + +KMG
Sbjct: 209 SCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLS 268
Query: 245 DSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR 304
+S V A IDM+SKC ++D+ F ++ + +V NS+I Y+ H E+AL +++
Sbjct: 269 NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAM 328
Query: 305 DSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRME 364
+ D FT S V+ + L+H H+ +++ GF D T+L++ Y K G ++
Sbjct: 329 TQSVRPDKFTFSSVLS-SMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVD 387
Query: 365 DARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI-PNHVTFLAVLSAC 423
A VF + K++I WN +I G + + +++ +F Q+L + + P+ VT + +L AC
Sbjct: 388 LAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVAC 447
Query: 424 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNM 483
Y+G G +IF SM + H V P HYAC+IELL R G+++EA + + PFEP+ ++
Sbjct: 448 CYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHI 507
Query: 484 WVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKR 543
W +L A G+ L + A+ + E +P Y++L+ IY + + + + + +
Sbjct: 508 WEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNE 567
Query: 544 KGLRMLPTCTWIEVKKQPHAF 564
L+ + I ++ +F
Sbjct: 568 HKLKSAQGSSKISIESSVFSF 588
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 167/342 (48%), Gaps = 35/342 (10%)
Query: 113 YDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD-- 170
+ LVN + +S K V ++ +GF Y NR L ++ K G +++A +LF D
Sbjct: 7 FSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIP 66
Query: 171 -----------------------------MPERDVVSWMTVIGGLVDSGDYSEAFGLFLF 201
MPERDVVSW T+I GLV G + +G+ +F
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHE--YGIRVF 124
Query: 202 MWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVAC-ALIDMYSKCG 260
++ + R F + AS + ++ G QIH A+ GV + V +++DMY + G
Sbjct: 125 FDMQRWEIRPTEFTFSILASL-VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLG 183
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
+ A F M ++ V WN +I + G E AL + MR+ + D +T+S+V+
Sbjct: 184 VFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVS 243
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
IC L L KQA A ++ GF S+ + A +D +SK R++D+ +F + + + +
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVL 303
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
N++I Y H GE A+++F + + V P+ TF +VLS+
Sbjct: 304 CNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 155/338 (45%), Gaps = 6/338 (1%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T +V++C LR + K+ I GF + ++ + M KC + D+ KLF ++
Sbjct: 237 TVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
+ D V ++IG +A LF+ + TF++ V +S ++ G
Sbjct: 297 EKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSS-VLSSMNAVMLDHGA 355
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
+HS +K+G D+ VA +L++MY K GS++ A F + K + WN++I G A +
Sbjct: 356 DVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNS 415
Query: 292 YSEEALSIYLE-MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR-HGFGSDIVA 349
+ E+L+I+ + + + K D T+ ++ C + Q +++ + HG
Sbjct: 416 RAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEH 475
Query: 350 NTALVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
+++ + G + +A+ + D++ + W ++ + G A + + ML E
Sbjct: 476 YACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTML-ES 534
Query: 409 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 446
+ +L ++ + E ++ Y+M+ +HK+K
Sbjct: 535 EPKSSFPYLVLIKIYEMTWRWENSVKLRYAMN-EHKLK 571
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 331 AKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGN 390
AK HA L+ GF + Y K G + +A +FD + KN I+WN + G
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 391 HGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 450
+G A+ +F++M ER + + T ++ L +C G E G +F+ M R +++P
Sbjct: 83 NGYLNNALDLFDEM-PERDVVSWNTMISGLVSC---GFHEYGIRVFFDMQR-WEIRPTEF 137
Query: 451 HYACMIELL 459
++ + L+
Sbjct: 138 TFSILASLV 146
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 208/420 (49%), Gaps = 40/420 (9%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
++ ++ C +++ I SG D+++ N ++ ++ + G ARK+ M
Sbjct: 142 SFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM 201
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
P RD VSW +++ ++ G EA LF M E + S F
Sbjct: 202 PVRDAVSWNSLLSAYLEKGLVDEARALFDEM--EERNVESWNF----------------- 242
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
+I Y+ G +++A+ FD MP + V WN+++ YA G
Sbjct: 243 --------------------MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVG 282
Query: 292 YSEEALSIYLEM-RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVAN 350
E L ++ +M DS K D FT+ V+ C L SL + H + +HG +
Sbjct: 283 CYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLA 342
Query: 351 TALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI 410
TALVD YSK G+++ A VF +++V +WN++I+ HG G+ A+++F +M+ E
Sbjct: 343 TALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFK 402
Query: 411 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 470
PN +TF+ VLSAC++ G+ ++ ++F MS ++V+P HY CM++LLGR G ++EA
Sbjct: 403 PNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEE 462
Query: 471 LIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGK 530
L+ P + + +LL AC+ G LE + A +L E++ Y + N+Y S G+
Sbjct: 463 LVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGR 522
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 154/327 (47%), Gaps = 27/327 (8%)
Query: 231 RQIHSCALKMGVGGDSFVACALIDMYS---KCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
+Q H+ LK G+ D+F A L+ + + ++ A +++ NS+I Y
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDI 347
A E AL+++ EM D ++ + V++ C E +Q H ++ G +D+
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE 407
LV+ Y + G E AR V DRM ++ +SWN+L++ Y G ++A +F++M E
Sbjct: 176 FVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM-EE 234
Query: 408 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM-----HYACMIELLGRE 462
R N ++ ++S + +GL + E+F SM V AM H C E+L
Sbjct: 235 R---NVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL--- 288
Query: 463 GLLDEAF-ALIRRAPFEPTKNMWVALLTACRMHGNLELGK----FAAEKLYEMDPGKLCN 517
E F ++ + +P V++L+AC G+L G+ + + E++ G L
Sbjct: 289 ----EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIE-GFLAT 343
Query: 518 YVMLLNIYNSSGKLKEAAGVLQTLKRK 544
L+++Y+ GK+ +A V + ++
Sbjct: 344 --ALVDMYSKCGKIDKALEVFRATSKR 368
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 243/526 (46%), Gaps = 72/526 (13%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
N+ EAMELF E+ + T +++ C L I + + + I E ++
Sbjct: 152 NQWSEAMELFR--EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVF 209
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF------- 199
+ +L M+ C + DARKLF +MPER++V+W ++ G +G +A LF
Sbjct: 210 VSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKD 269
Query: 200 LFMWVEFNDGRSRT---------FATMVR---------------ASAGLGLIQVGRQIHS 235
+ W DG R + M+R ASA G Q+H
Sbjct: 270 IVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHG 329
Query: 236 CALKMGVGGDSFVACALIDMYS-------------------------------KCGSIED 264
+K G F+ +I Y+ K G +E
Sbjct: 330 TIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQ 389
Query: 265 AQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM-RDSGAKIDHFTISIVIRICV 323
A+ FDQ +K WN++I+GYA + AL ++ EM S K D T+ V
Sbjct: 390 AREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAIS 449
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS--- 380
L SLE K+AH L + A++D Y+K G +E A ++F + KN+ S
Sbjct: 450 SLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQT--KNISSSTI 507
Query: 381 --WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 438
WNA+I G HG + A+ ++ + + PN +TF+ VLSAC ++GL E G F S
Sbjct: 508 SPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFES 567
Query: 439 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE 498
M DH ++P HY CM++LLG+ G L+EA +I++ P + +W LL+A R HGN+E
Sbjct: 568 MKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
Query: 499 LGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
+ + AA +L +DP VML N+Y +G+ ++ A V + ++ +
Sbjct: 628 IAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTR 673
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 140/588 (23%), Positives = 236/588 (40%), Gaps = 143/588 (24%)
Query: 99 LELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKC 158
+ G+ +D + AL C + +++ ++ SG + + Y+ N VL M+ KC
Sbjct: 31 FDFSGESSDTERALVSAL-GSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKC 89
Query: 159 GLMLDAR-------------------------------KLFGDMPERDVVSWMTVIGGLV 187
L+ DA KLF MPER VS+ T+I G
Sbjct: 90 RLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYA 149
Query: 188 DSGDYSEAFGLFLFM---WVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGG 244
+ +SEA LF M + N+ T AT++ A + LG I R + S A+K+ + G
Sbjct: 150 QNNQWSEAMELFREMRNLGIMLNE---VTLATVISACSHLGGIWDCRMLQSLAIKLKLEG 206
Query: 245 DSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSE---------- 294
FV+ L+ MY C ++DA+ FD+MPE+ V WN ++ GY+ G E
Sbjct: 207 RVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQIT 266
Query: 295 ---------------------EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQ 333
EAL Y EM G K + ++ R Q
Sbjct: 267 EKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQ 326
Query: 334 AHAALVRHGFG-------------------------------SDIVANTALVDFYSKWGR 362
H +V+ GF I + AL+ + K G
Sbjct: 327 LHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGM 386
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML-RERVIPNHVTFLAVLS 421
+E AR VFD+ H K++ SWNA+I+GY + A+ +F +M+ +V P+ +T ++V S
Sbjct: 387 VEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFS 446
Query: 422 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRA------ 475
A S G E G ++ + P A +I++ + G ++ A + +
Sbjct: 447 AISSLGSLEEGKRAHDYLNFS-TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSS 505
Query: 476 -------------------------------PFEPTKNMWVALLTACRMHGNLELGKFAA 504
P +P +V +L+AC G +ELGK
Sbjct: 506 TISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYF 565
Query: 505 EKL---YEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRML 549
E + + ++P + +Y ++++ +G+L+EA +++ + K M+
Sbjct: 566 ESMKSDHGIEP-DIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 612
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 241/465 (51%), Gaps = 40/465 (8%)
Query: 120 CVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSW 179
CV R + G K + + I G D+ + + ++ M+ KCG ++ ARK+F +MPER+V +W
Sbjct: 57 CVVPRVVLG-KLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATW 115
Query: 180 MTVIGGLVDSGDYSEAFGLF--------LFMWVEFNDGRSR---------TFATM----- 217
+IGG + +GD A GLF W+E G + F M
Sbjct: 116 NAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK 175
Query: 218 -VRA-SAGLGLIQVGRQIHSCA--LKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP 273
V+A S LG+ R++ + ++FV ++ Y + G + +A+ F ++
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVF 235
Query: 274 EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQ 333
+ V WN++IAGYA +GYS++A+ + M+ G + D T+S ++ C + L+ ++
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 334 AHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQ 393
H+ + G + + AL+D Y+K G +E+A VF+ + ++V N++I+ HG+
Sbjct: 296 VHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGK 355
Query: 394 GEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYA 453
G++A++MF M + P+ +TF+AVL+AC + G G +IF M + VKP H+
Sbjct: 356 GKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFG 414
Query: 454 CMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM--D 511
C+I LLGR G L EA+ L++ +P + ALL AC++H + E+ AE++ ++
Sbjct: 415 CLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEM----AEQVMKIIET 470
Query: 512 PGKLCN------YVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLP 550
G + N + N+Y + + + A + ++++GL P
Sbjct: 471 AGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSP 515
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 201/391 (51%), Gaps = 13/391 (3%)
Query: 174 RDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR----TFATMVRASAGLGLIQV 229
RD+ SW +VI G SG + E+ F M E G+ R T + AS LGL+
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAMSRE---GKIRHDLITLLGTISASGNLGLVLQ 599
Query: 230 GRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYAL 289
GR H A+K D+ + LI MY +C IE A F + + WN +I+ +
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
+ E ++ R+ + + T ++ +L S + QAH L+R GF ++
Sbjct: 660 NKAGREVFQLF---RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
+ ALVD YS G +E VF ++ +WN++I+ +G HG GE+A+++F+++
Sbjct: 717 SAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE 776
Query: 410 I-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
+ PN +F+++LSACS+SG + G + M VKP H ++++LGR G L EA
Sbjct: 777 MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREA 836
Query: 469 FALIRRAPFEPTK-NMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNS 527
+ I EP K +W ALL+AC HG+ +LGK AE L+EM+P Y+ L N Y
Sbjct: 837 YEFITGIG-EPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVG 895
Query: 528 SGKLKEAAGVLQTLKRKGLRMLPTCTWIEVK 558
G +EA + + ++ L+ LP + I+V+
Sbjct: 896 LGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 186/370 (50%), Gaps = 6/370 (1%)
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDS 189
+ V + + G DL +++L + + G ++ + LF ++ E+DV+ W ++I L +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 190 GDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVA 249
G Y A GLF+ M + N+ S T A + L L + +H A++ G+ GDS +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 250 CALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAK 309
AL+++Y+K ++ A+C F M + V WN+I+ +G+ ++L + M SG +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 310 IDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD--IVANTALVDFYSKWGRMEDAR 367
D T S VI C + L + H +++ G+ + + +++ YSK G E A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 368 HVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLR-ERVIPNHVTFLAVLSACSYS 426
VF+ + ++VIS NA++ G+ +G E+A + QM +++ P+ T +++ S C
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 427 GLSERGWEIFYSMSRDHKVKPRAMHYA-CMIELLGREGLLDEAFALIRRAPFEPTKNMWV 485
S G + + + +++ RA+ +I++ G+ GL +A L + + W
Sbjct: 407 SFSREGRAV-HGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVS-WN 464
Query: 486 ALLTACRMHG 495
++++A +G
Sbjct: 465 SMISAFSQNG 474
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 218/499 (43%), Gaps = 69/499 (13%)
Query: 85 LCNRH-REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP 143
L N H R++++ F+ + G AD T+ +++ C + + + + +I SG+ P
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADT--VTFSCVISACSSIEELTLGESLHGLVIKSGYSP 322
Query: 144 DLYMM--NRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLF 201
+ ++ N ++ M+ KCG A +F ++ RDV+S ++ G +G + EAFG+
Sbjct: 323 EAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQ 382
Query: 202 MWVEFNDGRSRTFATMVRASA---GLGLIQVGRQIHSCALKMGVGGDSF-VACALIDMYS 257
M + D AT+V ++ L + GR +H ++M + + V ++IDMY
Sbjct: 383 M--QSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYG 440
Query: 258 KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRD--SGAKIDHFTI 315
KCG A+ F + V WNS+I+ ++ +G++ +A +++ E+ S +K T+
Sbjct: 441 KCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTV 500
Query: 316 SIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHR 375
++ C SL K H L + G D S + R+E
Sbjct: 501 LAILTSCDSSDSLIFGKSVHCWLQKLG------------DLTSAFLRLETMSET------ 542
Query: 376 KNVISWNALIAGYGNHGQGEQAIQMFEQMLRE-RVIPNHVTFLAVLSACSYSGLSERG-- 432
+++ SWN++I+G + G ++++ F+ M RE ++ + +T L +SA GL +G
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRC 602
Query: 433 -------------------WEIFYSMSRD--HKVK-------PRAMHYACMIELLGREGL 464
Y +D VK P + C+I L +
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 465 LDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL----YEMDPGKLCNYVM 520
E F L R EP + +V LL+A G+ G A L ++ +P
Sbjct: 663 GREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV---SAA 719
Query: 521 LLNIYNSSGKLKEAAGVLQ 539
L+++Y+S G L+ V +
Sbjct: 720 LVDMYSSCGMLETGMKVFR 738
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 139/465 (29%), Positives = 239/465 (51%), Gaps = 18/465 (3%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+ + LF L++ D+ + T+ ++ C L ++V MI G E
Sbjct: 67 DTLALF--LQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTA 124
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ M+ K G ++D+ ++F + E+D+VSW ++ G + +G EA G+F M+ E +
Sbjct: 125 LIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEIS 184
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV-ACALIDMYSKCGSIEDAQCAF 269
T +++V+ A L ++Q G+Q+H A+ + G D V A+I YS G I +A +
Sbjct: 185 EFTLSSVVKTCASLKILQQGKQVH--AMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVY 242
Query: 270 DQMPEKT-TVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
+ + T V NS+I+G + +EA + R + +S + C + L
Sbjct: 243 NSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRP-----NVRVLSSSLAGCSDNSDL 297
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
KQ H +R+GF SD L+D Y K G++ AR +F + K+V+SW ++I Y
Sbjct: 298 WIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAY 357
Query: 389 GNHGQGEQAIQMFEQMLRE--RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 446
+G G +A+++F +M E V+PN VTFL V+SAC+++GL + G E F M +++
Sbjct: 358 AVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLV 417
Query: 447 PRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKN----MWVALLTACRMHGNLELGKF 502
P HY C I++L + G +E + L+ R ++ +WVA+L+AC ++ +L G++
Sbjct: 418 PGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEY 477
Query: 503 AAEKLY-EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
A +L E P YV++ N Y + GK + LK KGL
Sbjct: 478 VARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGL 522
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 196/394 (49%), Gaps = 19/394 (4%)
Query: 164 ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAG 223
A LF ++P+RD+ S + + + SG+ ++ LFL + D S TF ++ A +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 224 LGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSI 283
L + GRQ+H+ +K G + ALIDMYSK G + D+ F+ + EK V WN++
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
++G+ +G +EAL ++ M +I FT+S V++ C L L+ KQ HA +V G
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG- 215
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMH-RKNVISWNALIAGYGNHGQGEQAIQMFE 402
+V TA++ FYS G + +A V++ ++ + + N+LI+G + ++A F
Sbjct: 216 RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA---FL 272
Query: 403 QMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 462
M R+R PN + L+ CS + G +I R+ V + M ++ G+
Sbjct: 273 LMSRQR--PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLM-DMYGKC 329
Query: 463 GLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM---DPGKLCNYV 519
G + +A + R P + + W +++ A ++G+ G A E EM G L N V
Sbjct: 330 GQIVQARTIFRAIPSKSVVS-WTSMIDAYAVNGD---GVKALEIFREMCEEGSGVLPNSV 385
Query: 520 MLLNIYNS---SGKLKEAAGVLQTLKRKGLRMLP 550
L + ++ +G +KE +K K R++P
Sbjct: 386 TFLVVISACAHAGLVKEGKECFGMMKEK-YRLVP 418
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 207/420 (49%), Gaps = 19/420 (4%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
++ G D+ ++ ++ + +CG ++ A +L+ + +V +++ + GD A
Sbjct: 272 VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIA 331
Query: 196 FGLFLFMWVEFNDGRSRTFATMVRASAGLGL---------IQVGRQIHSCALKMGVGGDS 246
F ++R + A A +G+ I +G +H A+K G+ +
Sbjct: 332 VVYF---------SKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKT 382
Query: 247 FVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDS 306
V LI MYSK +E F+Q+ E + WNS+I+G G + A ++ +M +
Sbjct: 383 LVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLT 442
Query: 307 GAKI-DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMED 365
G + D TI+ ++ C +L L K+ H +R+ F ++ TAL+D Y+K G
Sbjct: 443 GGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQ 502
Query: 366 ARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSY 425
A VF + +WN++I+GY G +A+ + +M + + P+ +TFL VLSAC++
Sbjct: 503 AESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNH 562
Query: 426 SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWV 485
G + G F +M ++ + P HYA M+ LLGR L EA LI + +P +W
Sbjct: 563 GGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWG 622
Query: 486 ALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
ALL+AC +H LE+G++ A K++ +D YV++ N+Y + + V +K G
Sbjct: 623 ALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 157/312 (50%), Gaps = 11/312 (3%)
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVD 188
V++V ++ SG + +Y+ +L +++K G + A+ LF +MPERD V W +I G
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV 248
+G +A+ LF+ M + + T ++ G + GR +H A K G+ DS V
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
ALI YSKC + A+ F +M +K+TV WN++I Y+ G EEA++++ M +
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 309 KIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARH 368
+I TI I + A + H + H +V+ G +DI T+LV YS+ G + A
Sbjct: 249 EISPVTI-----INLLSAHVSH-EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAER 302
Query: 369 VFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYS-- 426
++ + +++ ++++ Y G + A+ F + + + + V + +L C S
Sbjct: 303 LYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSH 362
Query: 427 ---GLSERGWEI 435
G+S G+ I
Sbjct: 363 IDIGMSLHGYAI 374
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 143/302 (47%), Gaps = 13/302 (4%)
Query: 124 RSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVI 183
RS+ GV SG E D + N ++ + KC + A LF +M ++ VSW T+I
Sbjct: 171 RSVHGVAA------KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMI 224
Query: 184 GGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVG 243
G SG EA +F M+ + + T ++ A +H +K G+
Sbjct: 225 GAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS------HEPLHCLVVKCGMV 278
Query: 244 GDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM 303
D V +L+ YS+CG + A+ + + + VG SI++ YA G + A+ + +
Sbjct: 279 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 304 RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRM 363
R KID + ++ C + + ++ H ++ G + + L+ YSK+ +
Sbjct: 339 RQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDV 398
Query: 364 EDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQ-MLRERVIPNHVTFLAVLSA 422
E +F+++ +ISWN++I+G G+ A ++F Q ML ++P+ +T ++L+
Sbjct: 399 ETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAG 458
Query: 423 CS 424
CS
Sbjct: 459 CS 460
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 239/484 (49%), Gaps = 48/484 (9%)
Query: 83 LGLCNR---HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISS 139
+G C R ++E+++ F E+ D + A +L+ L K + ++
Sbjct: 89 IGACARNGYYQESLDFFR--EMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKF 146
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF 199
+E D ++++ ++ M+ K G + +ARK+F D+ E+D+V + +I G ++ EA L
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 200 LFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYS-- 257
M + +G+ D ALI +S
Sbjct: 207 KDMKL-----------------------------------LGIKPDVITWNALISGFSHM 231
Query: 258 ----KCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHF 313
K I + C P+ V W SII+G + +E+A + +M G +
Sbjct: 232 RNEEKVSEILELMCLDGYKPD--VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSA 289
Query: 314 TISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM 373
TI ++ C LA ++H K+ H V G +AL+D Y K G + +A +F +
Sbjct: 290 TIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKT 349
Query: 374 HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 433
+K +++N++I Y NHG ++A+++F+QM +H+TF A+L+ACS++GL++ G
Sbjct: 350 PKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQ 409
Query: 434 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRM 493
+F M +++ PR HYACM++LLGR G L EA+ +I+ EP +W ALL ACR
Sbjct: 410 NLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRN 469
Query: 494 HGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCT 553
HGN+EL + AA+ L E++P N ++L ++Y ++G + + + +K+K R +
Sbjct: 470 HGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSS 529
Query: 554 WIEV 557
W+E
Sbjct: 530 WVET 533
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 209/457 (45%), Gaps = 83/457 (18%)
Query: 135 YMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSE 194
++++SG + +++ +V+CG +LDARK+F +MP+RD+ + +IG +G Y E
Sbjct: 41 HLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQE 100
Query: 195 AFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALID 254
+ F M+ + + ++++AS L + G+ IH LK D+F+ +LID
Sbjct: 101 SLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLID 160
Query: 255 MYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFT 314
MYSK G + +A+ F + E+ V +N++I+GYA + ++EAL++ +M+ G K
Sbjct: 161 MYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIK----- 215
Query: 315 ISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM- 373
D++ AL+ +S E + + M
Sbjct: 216 ------------------------------PDVITWNALISGFSHMRNEEKVSEILELMC 245
Query: 374 ---HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 430
++ +V+SW ++I+G ++ Q E+A F+QML + PN T + +L AC+ +
Sbjct: 246 LDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMK 305
Query: 431 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNM------- 483
G EI + S ++ + ++++ G+ G + EA L R+ P + T
Sbjct: 306 HGKEI-HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCY 364
Query: 484 ---------------------------WVALLTACRMHGNLELGK---FAAEKLYEMDPG 513
+ A+LTAC G +LG+ + Y + P
Sbjct: 365 ANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVP- 423
Query: 514 KLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLP 550
+L +Y ++++ +GKL EA ++ K +RM P
Sbjct: 424 RLEHYACMVDLLGRAGKLVEAYEMI-----KAMRMEP 455
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 148/292 (50%), Gaps = 4/292 (1%)
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
++ ++ A+ L GR +H+ + G+ + +A L+ Y +CG + DA+ FD+M
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 273 PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAK 332
P++ G +I A +GY +E+L + EM G K+D F + +++ L E K
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGK 137
Query: 333 QAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHG 392
H +++ + SD ++L+D YSK+G + +AR VF + ++++ +NA+I+GY N+
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNS 197
Query: 393 QGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 452
Q ++A+ + + M + P+ +T+ A++S S+ E+ EI M D KP + +
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSW 256
Query: 453 ACMIELLGREGLLDEAFALIRRA---PFEPTKNMWVALLTACRMHGNLELGK 501
+I L ++AF ++ P + LL AC ++ GK
Sbjct: 257 TSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGK 308
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/568 (26%), Positives = 250/568 (44%), Gaps = 68/568 (11%)
Query: 91 EAMELF-EILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMN 149
EA+E+F E+ E D + T +V + L ++ +++ ++ +G + + ++
Sbjct: 105 EAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVS 164
Query: 150 RVLLMHVKCGLMLDARKLF-----------------------GDM----------PE-RD 175
++ M+ KCG + +F GD+ PE D
Sbjct: 165 SLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELND 224
Query: 176 VVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHS 235
+SW T+I G +G EA + + M +F ++ + L +++G+++H+
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 236 CALKMGVGGDSFVACALIDMYSKCGSIEDAQCA--------------------------- 268
LK G + FV+ ++D+Y KCG+++ A+ A
Sbjct: 285 RVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVE 344
Query: 269 ----FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLE-MRDSGAKIDHFTISIVIRICV 323
FD + EK V W ++ GY + L + + + D + V+ C
Sbjct: 345 AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACS 404
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNA 383
A +E K+ H +R G D TA VD YSK G +E A +FD ++ + +NA
Sbjct: 405 LQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNA 464
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
+IAG +HG ++ Q FE M P+ +TF+A+LSAC + GL G + F SM +
Sbjct: 465 MIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAY 524
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRA-PFEPTKNMWVALLTACRMHGNLELGKF 502
+ P HY CMI+L G+ LD+A L+ E + A L AC + N EL K
Sbjct: 525 NISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKE 584
Query: 503 AAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPH 562
EKL ++ Y+ + N Y SSG+ E + ++ K L + C+W + KQ H
Sbjct: 585 VEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFH 644
Query: 563 AFLCGDKSHTQTKEIYQKVDEILDEISR 590
F D SH +T+ IY + + ++S
Sbjct: 645 MFTSSDISHYETEAIYAMLHFVTKDLSE 672
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 238/558 (42%), Gaps = 118/558 (21%)
Query: 110 ASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLF- 168
A + + LVN+ +R + VF+ M+ E ++Y N V+ +VK + +AR+LF
Sbjct: 23 AVSSNQLVNLYSKSGLLREARNVFDEML----ERNVYSWNAVIAAYVKFNNVKEARELFE 78
Query: 169 GDMPERDVVSWMTVIGGLVDS-GDYSEAFGLFLFMWVEFNDG---RSRTFATMVRASAGL 224
D ERD++++ T++ G + G SEA +F M + D T TMV+ SA L
Sbjct: 79 SDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKL 138
Query: 225 GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKC------------------------- 259
+ G Q+H +K G G F +LI MYSKC
Sbjct: 139 TNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNA 198
Query: 260 --------GSIEDAQCAFDQMPE-KTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI 310
G I+ A F + PE T+ WN++IAGYA +GY EEAL + + M ++G K
Sbjct: 199 MIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKW 258
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDF-------------- 356
D + V+ + L SL+ K+ HA ++++G S+ ++ +VD
Sbjct: 259 DEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAH 318
Query: 357 -----------------YSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQ 399
YS G+M +A+ +FD + KN++ W A+ GY N Q + ++
Sbjct: 319 LLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLE 378
Query: 400 MFEQML-RERVIPNHVTFLAVLSACSYSGLSERGWEI------------------FYSMS 440
+ + E P+ + ++VL ACS E G EI F M
Sbjct: 379 LARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMY 438
Query: 441 R------------DHKVKPRAMHYACMIELL---GREGLLDEAFALIRRAPFEPTKNMWV 485
D + + Y MI G E + F + F+P + ++
Sbjct: 439 SKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFM 498
Query: 486 ALLTACRMHG-NLELGKFAAEKL--YEMDPGKLCNYVMLLNIYNSSGKLKEA----AGVL 538
ALL+ACR G LE K+ + Y + P + +Y ++++Y + +L +A G+
Sbjct: 499 ALLSACRHRGLVLEGEKYFKSMIEAYNISP-ETGHYTCMIDLYGKAYRLDKAIELMEGID 557
Query: 539 QTLKRKGL--RMLPTCTW 554
Q K + L C+W
Sbjct: 558 QVEKDAVILGAFLNACSW 575
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 322 CVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISW 381
C++ L H + ++ G V++ LV+ YSK G + +AR+VFD M +NV SW
Sbjct: 3 CLKDGFLHHIRS-----IKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSW 57
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 441
NA+IA Y ++A ++FE ER + + T L+ + G E+F M R
Sbjct: 58 NAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKT--DGCESEAIEMFGEMHR 115
Query: 442 DHK 444
K
Sbjct: 116 KEK 118
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 206/426 (48%), Gaps = 31/426 (7%)
Query: 272 MPEKTTVGWNSIIAGYALH------------GYSEEALSIYLEMRDSGAKIDHFTISIVI 319
+P++ G N ++ H G ++A+ I R+ G +D + +
Sbjct: 129 VPQENNTGGNHFQQDHSGHSSLDELDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIA 188
Query: 320 RICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVI 379
++C +L+ AK H + SDI A ++++ YS G +EDA VF+ M +N+
Sbjct: 189 QLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLE 248
Query: 380 SWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 439
+W +I + +GQGE AI F + +E P+ F + AC G G F SM
Sbjct: 249 TWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESM 308
Query: 440 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLEL 499
+++ + P HY ++++L G LDEA + EP ++W L+ R+HG+L L
Sbjct: 309 YKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVE--SMEPNVDLWETLMNLSRVHGDLIL 366
Query: 500 GKFAAEKLYEMDPGKLCNYVML-LNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVK 558
G + + ++D +L L SS +KE + G+R +
Sbjct: 367 GDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMAA------- 419
Query: 559 KQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEEEQRLQQY-HSE 617
GD S + +E+Y + + + + GY+ +++ L DVD+E + + H+E
Sbjct: 420 --------GDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNE 471
Query: 618 KLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNATC 677
+ A ++TP + +++ + RVC DCHNA+KL++ + GRE++ RDA RFHH ++ C
Sbjct: 472 RFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVC 531
Query: 678 SCGDYW 683
SC +YW
Sbjct: 532 SCREYW 537
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 251 ALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI 310
++I+MYS CGS+EDA F+ MPE+ W +I +A +G E+A+ + + G K
Sbjct: 221 SIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKP 280
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHV 369
D + C L + ++ + +G + +LV ++ G +++A
Sbjct: 281 DGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRF 340
Query: 370 FDRMHRKNVISWNALIAGYGNHGQ---GEQAIQMFEQMLRERV 409
+ M NV W L+ HG G++ M EQ+ R+
Sbjct: 341 VESM-EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRL 382
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 209/442 (47%), Gaps = 40/442 (9%)
Query: 145 LYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWV 204
LY N++ +H ++L + L + V + T+I + +G+Y + LF M
Sbjct: 24 LYSSNQIKQIHT---VLLTSNALVASRWKTKCV-YNTLIRSYLTTGEYKTSLALFTHMLA 79
Query: 205 EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED 264
+ TF ++++A+ + G +H ALK G D FV + + Y + G +E
Sbjct: 80 SHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLES 139
Query: 265 AQCAFD-------------------------------QMPEKTTVGWNSIIAGYALHGYS 293
++ FD +MP V W ++I G++ G
Sbjct: 140 SRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLH 199
Query: 294 EEALSIYLEMRDSGAKI---DHFTISIVIRICVRL--ASLEHAKQAHAALVRHGFGSDIV 348
+AL ++ EM + + + T V+ C + KQ H ++
Sbjct: 200 AKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTT 259
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
TAL+D Y K G +E A +FD++ K V +WNA+I+ ++G+ +QA++MFE M
Sbjct: 260 LGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSY 319
Query: 409 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
V PN +T LA+L+AC+ S L + G ++F S+ ++K+ P + HY C+++L+GR GLL +A
Sbjct: 320 VHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDA 379
Query: 469 FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSS 528
I+ PFEP ++ ALL AC++H N ELG ++L + P YV L
Sbjct: 380 ANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALD 439
Query: 529 GKLKEAAGVLQTLKRKGLRMLP 550
EA + + + G+R +P
Sbjct: 440 SNWSEAEKMRKAMIEAGIRKIP 461
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
M P + N +L + G M A + F MP DVVSW TVI G G +++A
Sbjct: 143 MFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKA 202
Query: 196 FGLFLFMWVEFNDGRS------RTFATMVRASAGL--GLIQVGRQIHSCALKMGVGGDSF 247
+F M + R+ TF +++ + A G I++G+QIH + + +
Sbjct: 203 LMVFGEM---IQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTT 259
Query: 248 VACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSG 307
+ AL+DMY K G +E A FDQ+ +K WN+II+ A +G ++AL ++ M+ S
Sbjct: 260 LGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSY 319
Query: 308 AKIDHFTISIVIRICVR 324
+ T+ ++ C R
Sbjct: 320 VHPNGITLLAILTACAR 336
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 195/393 (49%), Gaps = 34/393 (8%)
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
S TF +++ + G+ H A+K G V +L+ MY+ CG+++ A+ F
Sbjct: 118 SYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFV 177
Query: 271 QMPEKTTVGWNSIIAG-------YALHGYSEE------------------------ALSI 299
++P++ V WNSIIAG A H +E ++S+
Sbjct: 178 EIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISL 237
Query: 300 YLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSK 359
+ EM +G + + T+ +++ C R A L+ + HA+L+R S +V +TAL+D Y K
Sbjct: 238 FREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGK 297
Query: 360 WGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAV 419
+ AR +FD + +N ++WN +I + HG+ E +++FE M+ + P+ VTF+ V
Sbjct: 298 CKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGV 357
Query: 420 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE- 478
L C+ +GL +G + M + ++KP H CM L G +EA ++ P E
Sbjct: 358 LCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDED 417
Query: 479 --PTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAG 536
P W LL++ R GN LG+ A+ L E DP Y +L+NIY+ +G+ ++
Sbjct: 418 VTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNR 477
Query: 537 VLQTLKRKGLRMLPTCTWIEVKKQPHAFLCGDK 569
V + +K + + +P C +++K+ H G K
Sbjct: 478 VREMVKERKIGRIPGCGLVDLKEIVHGLRLGCK 510
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 47/303 (15%)
Query: 137 ISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAF 196
I G + L + N ++ M+ CG + A+KLF ++P+RD+VSW ++I G+V +GD A
Sbjct: 145 IKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAH 204
Query: 197 GLF--------------LFMWVEFND-----------------GRSRTFATMVRASAGLG 225
LF + ++ N+ G T ++ A
Sbjct: 205 KLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSA 264
Query: 226 LIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIA 285
++ GR +H+ ++ + + ALIDMY KC + A+ FD + + V WN +I
Sbjct: 265 RLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMIL 324
Query: 286 GYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALV-----R 340
+ LHG E L ++ M + + D T V+ C R + + ++ +V +
Sbjct: 325 AHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIK 384
Query: 341 HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV----ISWNALIAG---YGNHGQ 393
FG + + YS G E+A + ++V W L++ GN
Sbjct: 385 PNFGH----QWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTL 440
Query: 394 GEQ 396
GE
Sbjct: 441 GES 443
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 70/142 (49%)
Query: 281 NSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR 340
N + Y + ++AL Y ++ G D +T +I + ++ K H ++
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 341 HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQM 400
HG + +L+ Y+ G ++ A+ +F + +++++SWN++IAG +G A ++
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 401 FEQMLRERVIPNHVTFLAVLSA 422
F++M + +I ++ A L A
Sbjct: 207 FDEMPDKNIISWNIMISAYLGA 228
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/533 (27%), Positives = 240/533 (45%), Gaps = 67/533 (12%)
Query: 99 LELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKC 158
+EL D AS L+ V + +++ Y+ GF + + N ++ +
Sbjct: 44 VELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTS 103
Query: 159 GLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMV 218
+ DA K+F +MP+ DV+SW +++ G V SG + E LFL + +F +
Sbjct: 104 DSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAAL 163
Query: 219 RASAGLGLIQVGRQIHSCALKMGV-GGDSFVACALIDMYSKCGSIED------------- 264
A A L L +G IHS +K+G+ G+ V LIDMY KCG ++D
Sbjct: 164 AACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDT 223
Query: 265 -------AQCA-----------FDQMPEKTTV---------------------------- 278
A C+ F QMP TV
Sbjct: 224 VSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNP 283
Query: 279 ---GWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAH 335
WN+I+ GY S EA + +M SG + D +++SIV+ LA + H
Sbjct: 284 NSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIH 343
Query: 336 AALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGE 395
A + G S +V +AL+D YSK G ++ A +F M RKN+I WN +I+GY +G
Sbjct: 344 ACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSI 403
Query: 396 QAIQMFEQMLRERVI-PNHVTFLAVLSACSYSGLS-ERGWEIFYSMSRDHKVKPRAMHYA 453
+AI++F Q+ +ER + P+ TFL +L+ CS+ + E F M ++++KP H
Sbjct: 404 EAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCC 463
Query: 454 CMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPG 513
+I +G+ G + +A +I+ F W ALL AC +L+ K A K+ E+
Sbjct: 464 SLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDA 523
Query: 514 KLCN--YVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPHAF 564
Y+++ N+Y + +E + + ++ G+ +WI+ + + ++
Sbjct: 524 DKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 12/266 (4%)
Query: 178 SWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMV---RASAGLGLIQVGRQIH 234
SW T++ L G + G+ NDG + +V R S G + + RQ+H
Sbjct: 23 SWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 235 SCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSE 294
K G ++ ++ +L+ Y S+EDA FD+MP+ + WNS+++GY G +
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 295 EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF-GSDIVANTAL 353
E + ++LE+ S + F+ + + C RL H+ LV+ G ++V L
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 354 VDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNH 413
+D Y K G M+DA VF M K+ +SWNA++A +G+ E + F QM P+
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDT 254
Query: 414 VTFLAVLSACSYSGLSERGWEIFYSM 439
VT+ ++ A SG +++ M
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDM 280
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 133/266 (50%), Gaps = 5/266 (1%)
Query: 276 TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAH 335
++ W++I+ A G S L +E+ + G K D + ++R+ + +Q H
Sbjct: 20 SSNSWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 336 AALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGE 395
+ +HGF S+ + +L+ FY +EDA VFD M +VISWN+L++GY G+ +
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 396 QAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 455
+ I +F ++ R V PN +F A L+AC+ LS G I + + K + C+
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 456 IELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKL 515
I++ G+ G +D+A + + + T + W A++ +C +G LELG + ++M
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVS-WNAIVASCSRNGKLELGLWF---FHQMPNPDT 254
Query: 516 CNYVMLLNIYNSSGKLKEAAGVLQTL 541
Y L++ + SG A VL +
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDM 280
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 17/247 (6%)
Query: 80 IEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISS 139
I+ G C +A+ +F+ +E E D +++A+V C S G ++ +
Sbjct: 199 IDMYGKCGFMDDAVLVFQHME-EKDTV-----SWNAIVASC----SRNGKLELGLWFFHQ 248
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF 199
PD N ++ VK G +A ++ DMP + SW T++ G V+S EA F
Sbjct: 249 MPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFF 308
Query: 200 LFM---WVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMY 256
M V F++ + + ++ A A L ++ G IH+CA K+G+ VA ALIDMY
Sbjct: 309 TKMHSSGVRFDE---YSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMY 365
Query: 257 SKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMR-DSGAKIDHFTI 315
SKCG ++ A+ F MP K + WN +I+GYA +G S EA+ ++ +++ + K D FT
Sbjct: 366 SKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTF 425
Query: 316 SIVIRIC 322
++ +C
Sbjct: 426 LNLLAVC 432
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 192/392 (48%), Gaps = 20/392 (5%)
Query: 295 EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALV 354
EAL + + D G +D + + ++C + +LE A+ H + D + ++
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCIT----PLDARSYHTVI 150
Query: 355 DFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHV 414
+ YS +DA +VF+ M ++N +W +I +G+GE+AI MF + + E P+
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 415 TFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
F AV AC G G F SM RD+ + Y +IE+L G LDEA + R
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 475 APFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEA 534
EP+ MW L+ C + G LELG AE + ++D ++ S+ L A
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSK--------ESNAGLVAA 322
Query: 535 AGVLQTLKRKGLRMLPTCTWI--EVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHG 592
+++ L+ L C I + KK+ H F GD SH T ++ + + +I G
Sbjct: 323 KASDSAMEK--LKELRYCQMIRDDPKKRMHEFRAGDTSHLGTVSAFRSLKVQMLDI---G 377
Query: 593 YIKENEMLLPDVDEEEQRLQ-QYHSEKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIK 651
++ + V+EEE+ Q + S KLA A +IN+ PL + Q R C D HN K
Sbjct: 378 FVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFK 437
Query: 652 LIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
+I+++TGR ++ RD ++H ++N CSC DYW
Sbjct: 438 MISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAG 286
++ R +H C + D+ +I+MYS C S +DA F++MP++ + W ++I
Sbjct: 128 LEEARVVHDCITPL----DARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRC 183
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR-HGFGS 345
A +G E A+ ++ + G K D V CV + + ++ R +G
Sbjct: 184 LAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVL 243
Query: 346 DIVANTALVDFYSKWGRMEDARHVFDRMH-RKNVISWNALI 385
+ +++ + G +++A +RM +V W L+
Sbjct: 244 SMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLM 284
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 19/224 (8%)
Query: 75 GLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFN 134
LC Q+ + REA+E+ +ILE +G D L +C + ++ + V +
Sbjct: 86 ALCKQV-------KIREALEVIDILEDKGYIVDFPRLL--GLAKLCGEVEALEEARVVHD 136
Query: 135 YMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSE 194
+ D + V+ M+ C DA +F +MP+R+ +W T+I L +G+
Sbjct: 137 CITP----LDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGER 192
Query: 195 AFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALK---MGVGGDSFVACA 251
A +F E N F + A +G I G + M + + +V
Sbjct: 193 AIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYV--N 250
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKTTVG-WNSIIAGYALHGYSE 294
+I+M + CG +++A ++M + +V W +++ + GY E
Sbjct: 251 VIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLE 294
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 198/374 (52%), Gaps = 8/374 (2%)
Query: 126 IRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGG 185
+R +K++ + + +Y N ++ V+ G ++ ARK+F MPE++ V+W +I G
Sbjct: 98 MRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDG 157
Query: 186 LVDSGDYSEAFGLF---LFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGV 242
+ G EAF LF + + F + R F ++ + ++GRQ+H +K+GV
Sbjct: 158 YLKYGLEDEAFALFEDYVKHGIRFTN--ERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV 215
Query: 243 GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLE 302
G + V +L+ Y++CG + A AFD M EK + W ++I+ + G+ +A+ +++
Sbjct: 216 G-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIG 274
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
M + + FT+ +++ C +L +Q H+ +V+ +D+ T+L+D Y+K G
Sbjct: 275 MLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGE 334
Query: 363 MEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
+ D R VFD M +N ++W ++IA + G GE+AI +F M R +I N++T +++L A
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 423 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKN 482
C G G E+ + ++ ++ + ++ L + G +AF ++++ P +
Sbjct: 395 CGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS 453
Query: 483 MWVALLTACRMHGN 496
W A+++ C G+
Sbjct: 454 -WTAMISGCSSLGH 466
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 160/312 (51%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T +++ C +++R ++V + ++ + D+++ ++ M+ KCG + D RK+F M
Sbjct: 286 TVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGM 345
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
R+ V+W ++I G EA LF M + T +++RA +G + +G+
Sbjct: 346 SNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGK 405
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHG 291
++H+ +K + + ++ L+ +Y KCG DA Q+P + V W ++I+G + G
Sbjct: 406 ELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLG 465
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
+ EAL EM G + + FT S ++ C SL + H+ ++ S++ +
Sbjct: 466 HESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGS 525
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
AL+ Y+K G + +A VFD M KN++SW A+I GY +G +A+++ +M E
Sbjct: 526 ALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEV 585
Query: 412 NHVTFLAVLSAC 423
+ F +LS C
Sbjct: 586 DDYIFATILSTC 597
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 152/296 (51%), Gaps = 4/296 (1%)
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKID 311
LID K I A+ FD MP + V WNS+I+GYA + EA+ ++ EM G K D
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 312 HFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
+ I + C + + K H R D T LVDFY+K G ++ A +F+
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 431
K + +WNA+I G HG GE + F +M+ + P+ VTF++VL CS+SGL +
Sbjct: 309 LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDE 368
Query: 432 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKN----MWVAL 487
+F M + V HY CM +LLGR GL++EA +I + P + W L
Sbjct: 369 ARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGL 428
Query: 488 LTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKR 543
L CR+HGN+E+ + AA ++ + P Y +++ +Y ++ + +E V + + R
Sbjct: 429 LGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDR 484
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 6/262 (2%)
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLF 201
+ D+ N ++ VK ++ AR+LF MP RD+VSW ++I G EA LF
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 202 MWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGS 261
M + + + A A G Q G+ IH + + DSF+A L+D Y+KCG
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 262 IEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRI 321
I+ A F+ +KT WN++I G A+HG E + + +M SG K D T V+
Sbjct: 300 IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
Query: 322 CVRLASLEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHVFDRM-----HR 375
C ++ A+ + + ++ + D + G +E+A + ++M +R
Sbjct: 360 CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNR 419
Query: 376 KNVISWNALIAGYGNHGQGEQA 397
+ +++W+ L+ G HG E A
Sbjct: 420 EKLLAWSGLLGGCRIHGNIEIA 441
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 99/189 (52%), Gaps = 6/189 (3%)
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
D FT++ +IR+ +A ++ A Q L D+V L+D K + AR +F
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQ----LFDENPQRDVVTYNVLIDGLVKAREIVRARELF 206
Query: 371 DRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 430
D M ++++SWN+LI+GY +AI++F++M+ + P++V ++ LSAC+ SG +
Sbjct: 207 DSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQ 266
Query: 431 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTA 490
+G I + ++ ++ + +++ + G +D A + + T W A++T
Sbjct: 267 KGKAI-HDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCS-DKTLFTWNAMITG 324
Query: 491 CRMHGNLEL 499
MHGN EL
Sbjct: 325 LAMHGNGEL 333
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 196/399 (49%), Gaps = 23/399 (5%)
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
+ G EA+ + + + G +D + + ++C + +LE A+ H ++ D+
Sbjct: 96 IQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVG 155
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRER 408
A A+++ YS ++DA VF+ M N + ++ + N+G GE+AI +F + E
Sbjct: 156 ARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEG 215
Query: 409 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
PN F V S C+ +G + G F +M R++ + P HY + ++L G LDEA
Sbjct: 216 NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEA 275
Query: 469 FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSS 528
+ R P EP+ ++W L+ R+HG++ELG AE + ++D +L
Sbjct: 276 LNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKV---------- 325
Query: 529 GKLKEAAGVLQTLKRKGLRMLPTCTWIEVKKQPH---AFLCGDKSHTQTKEIYQKVDEIL 585
+AG++ T ++ P+ + +P+ F D SH Q IY+ + +
Sbjct: 326 ----SSAGLVATKASDFVKKEPS-----TRSEPYFYSTFRPVDSSHPQMNIIYETLMSLR 376
Query: 586 DEISRHGYIKENEMLLPDVDEEEQRLQQY-HSEKLAIAFGLINTPDWTPLQITQGHRVCG 644
++ GY+ + + E + Q + + E++A+ L+ + + + + R+ G
Sbjct: 377 SQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVG 436
Query: 645 DCHNAIKLIAMVTGREIVVRDASRFHHFRNATCSCGDYW 683
DCH+ +KL++++TGR+++ RDA +H F+N C C + W
Sbjct: 437 DCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 17/227 (7%)
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNS---- 282
++ R +H C + + D A+I+MYS C S++DA F++MPE WNS
Sbjct: 135 LEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPE-----WNSGTLC 189
Query: 283 -IIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVR- 340
++ + +GY EEA+ ++ ++ G K + + V C ++ A+ R
Sbjct: 190 VMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYRE 249
Query: 341 HGFGSDIVANTALVDFYSKWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQ---GEQ 396
+G + ++ + G +++A + +RM +V W L+ HG G++
Sbjct: 250 YGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDR 309
Query: 397 AIQMFEQMLRERVIPNHVTFLAVLSACSY--SGLSERGWEIFYSMSR 441
++ E++ R+ L A + S R FYS R
Sbjct: 310 CAELVEKLDATRLDKVSSAGLVATKASDFVKKEPSTRSEPYFYSTFR 356
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 201/435 (46%), Gaps = 41/435 (9%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A++LF + G + G TY +++ V ++ + +++ +I +G E + + N
Sbjct: 299 KALKLFVSMPEHGFSPNQG--TYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNA 356
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGR 210
++ + KCG + D+R F + ++++V W ++ G + D LFL M
Sbjct: 357 LIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQMLQMGFRPT 415
Query: 211 SRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFD 270
TF+T +++ L +Q+HS ++MG + +V +L+ Y+K + DA D
Sbjct: 416 EYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLD 471
Query: 271 --------------------------------QMPEKTTVGWNSIIAGYALHGYSEEALS 298
+ + TV WN IA + Y EE +
Sbjct: 472 WASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIE 531
Query: 299 IYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFG-SDIVANTALVDFY 357
++ M S + D +T ++ +C +L L H + + F +D L+D Y
Sbjct: 532 LFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMY 591
Query: 358 SKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
K G + VF+ KN+I+W ALI+ G HG G++A++ F++ L P+ V+F+
Sbjct: 592 GKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFI 651
Query: 418 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPF 477
++L+AC + G+ + G +F M +D+ V+P HY C ++LL R G L EA LIR PF
Sbjct: 652 SILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPF 710
Query: 478 EPTKNMWVALLTACR 492
+W L C
Sbjct: 711 PADAPVWRTFLDGCN 725
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/542 (23%), Positives = 241/542 (44%), Gaps = 87/542 (16%)
Query: 108 VGAS-TYDALVNVCVGLRSIRGV---KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLD 163
+GAS T + + V G+ ++ + K++ G + ++ ++N ++ + KCG
Sbjct: 209 MGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHM 268
Query: 164 ARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAG 223
A ++F D D+VSW +I S + +A LF+ M T+ +++ S+
Sbjct: 269 AERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSL 328
Query: 224 LGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSI 283
+ L+ GRQIH +K G + ALID Y+KCG++ED++ FD + +K V WN++
Sbjct: 329 VQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNAL 388
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
++GYA + LS++L+M G + +T S ++ C + +Q H+ +VR G+
Sbjct: 389 LSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGY 443
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFD-------------------------------- 371
+ ++L+ Y+K M DA + D
Sbjct: 444 EDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLIS 503
Query: 372 RMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 431
+ + + +SWN IA E+ I++F+ ML+ + P+ TF+++LS CS
Sbjct: 504 TLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTL 563
Query: 432 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPT--KNM--WVAL 487
G I +++ +I++ G+ G + + FE T KN+ W AL
Sbjct: 564 GSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKV-----FEETREKNLITWTAL 618
Query: 488 LTACRMHGNLELGKFAAEKLYE-----MDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLK 542
++ +HG G+ A EK E P ++ +++ +L G +KE G+ Q +K
Sbjct: 619 ISCLGIHG---YGQEALEKFKETLSLGFKPDRV-SFISILTACRHGGMVKEGMGLFQKMK 674
Query: 543 RKGLRMLPTCTWIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLP 602
G V+ + + C +D ++R+GY+KE E L+
Sbjct: 675 DYG-----------VEPEMDHYRCA-----------------VDLLARNGYLKEAEHLIR 706
Query: 603 DV 604
++
Sbjct: 707 EM 708
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 140/290 (48%), Gaps = 1/290 (0%)
Query: 141 FEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFL 200
F D ++ +L ++ + L+ A ++F DMP + + +W ++ L G E F
Sbjct: 145 FMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFR 204
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCG 260
+ +F +++ + + + + +Q+H A K G+ + V +LI Y KCG
Sbjct: 205 ELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCG 264
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
+ A+ F V WN+II A +AL +++ M + G + T V+
Sbjct: 265 NTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLG 324
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS 380
+ + L +Q H L+++G + IV AL+DFY+K G +ED+R FD + KN++
Sbjct: 325 VSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVC 384
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 430
WNAL++GY N G + +F QML+ P TF L +C + L +
Sbjct: 385 WNALLSGYANK-DGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQ 433
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 154/331 (46%), Gaps = 19/331 (5%)
Query: 115 ALVNVCVGLRSIRGVKKV--FNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
+L+NVC S K + + + S +Y+ N ++ ++ K G + A K+F MP
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL------ 226
ER+ VS+ T+I G GD +A+G+F M R F + S GL
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEM---------RYFGYLPNQSTVSGLLSCASL 127
Query: 227 -IQVGRQIHSCALKMGVG-GDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSII 284
++ G Q+H +LK G+ D+FV L+ +Y + +E A+ F+ MP K+ WN ++
Sbjct: 128 DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMM 187
Query: 285 AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFG 344
+ G+ +E + + E+ GA + + V++ + L+ +KQ H + + G
Sbjct: 188 SLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLD 247
Query: 345 SDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
+I +L+ Y K G A +F +++SWNA+I +A+++F M
Sbjct: 248 CEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSM 307
Query: 405 LRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
PN T+++VL S L G +I
Sbjct: 308 PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI 338
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 175/346 (50%), Gaps = 17/346 (4%)
Query: 227 IQVGRQIHSCALKMGVGGDS-FVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIA 285
++VGR +H K+G +S + L+ Y+K G + A+ FD+MPE+T+V WN++I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 286 GYALHG-----YSEEALSIYLEMR--DSGAKIDHFTISIVIRICVRLASLEHAKQAHAAL 338
GY H + +A+ ++ SG + T+ V+ + LE H +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 339 VRHGFGS--DIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQ 396
+ GF D+ TALVD YSK G + +A VF+ M KNV +W ++ G +G+G +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 397 AIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMI 456
+ +M + PN +TF ++LSA + GL E G E+F SM V P HY C++
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 457 ELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMD----- 511
+LLG+ G + EA+ I P +P + +L AC ++G +G+ + L E++
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEK 426
Query: 512 -PGKLC-NYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWI 555
G C +YV L N+ GK E + + +K + ++ P +++
Sbjct: 427 LSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 19/298 (6%)
Query: 124 RSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVI 183
R + G+ K ++ +E +L + +L + K G + ARK+F +MPER V+W +I
Sbjct: 131 RIVHGMVKKLGFL----YESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 184 GGLV---DSGDYSEAFGLFLFMWVE-FNDGRSRTFATMV---RASAGLGLIQVGRQIHSC 236
GG D G+++ + LF G T TMV A + GL+++G +H
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 237 ALKMGVGG--DSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSE 294
K+G D F+ AL+DMYSKCG + +A F+ M K W S+ G AL+G
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN 305
Query: 295 EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAAL-VRHGFGSDIVANTAL 353
E ++ M +SG K + T + ++ + +E + ++ R G I +
Sbjct: 306 ETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCI 365
Query: 354 VDFYSKWGRMEDARHVFDRMHRK-NVISWNALIAG---YGNHGQGEQAIQMFEQMLRE 407
VD K GR+++A M K + I +L YG GE+ + ++ RE
Sbjct: 366 VDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIERE 423
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 175/348 (50%), Gaps = 36/348 (10%)
Query: 239 KMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----------------------- 275
K+G +V AL+ MY G++ DA FD+MPE+
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 276 --------TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA-KIDHFTISIVIRICVRLA 326
T V W +II GYA +EA+ ++ M A K + TI ++ L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 327 SLEHAKQAHAALVRHGF-GSDIVANTALVDFYSKWGRMEDARHVFDRMH--RKNVISWNA 383
L+ HA + + GF DI +L+D Y+K G ++ A F + RKN++SW
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW-EIFYSMSRD 442
+I+ + HG G++A+ MF+ M R + PN VT ++VL+ACS+ GL+E + E F +M +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 443 HKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKF 502
+K+ P HY C++++L R+G L+EA + P E +W LL AC ++ + EL +
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 503 AAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLP 550
KL E++ +YV++ NI+ +G+ +A + + +G+ LP
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLP 498
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 141/304 (46%), Gaps = 38/304 (12%)
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF 199
GFE +Y+ ++ M++ G M+DA K+F +MPER+ V+W +I GL + GD+ +A
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 200 LFM-------WVEFNDGRSRT---------FATMVRASA----------------GLGLI 227
M W DG +R F+ MV A LG +
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 228 QVGRQIHSCALKMG-VGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE--KTTVGWNSII 284
++ +H+ K G V D V +LID Y+KCG I+ A F ++P K V W ++I
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMI 332
Query: 285 AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR--LASLEHAKQAHAALVRHG 342
+ +A+HG +EA+S++ +M G K + T+ V+ C LA E + + + +
Sbjct: 333 SAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHV-FDRMHRKNVISWNALIAGYGNHGQGEQAIQMF 401
D+ LVD + GR+E+A + + + + W L+ + E A ++
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVT 452
Query: 402 EQML 405
+++
Sbjct: 453 RKLM 456
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 181/387 (46%), Gaps = 33/387 (8%)
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVD 188
+K++ +I D ++ +++ + G A +F + +W +I L
Sbjct: 36 LKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSV 95
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSR-TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSF 247
+ EA LF+ M + + TF +++A I++G Q+H A+K G D F
Sbjct: 96 NHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVF 155
Query: 248 VACALIDMYSKCG-------------------------------SIEDAQCAFDQMPEKT 276
L+D+Y KCG ++ A+ F+QMP +
Sbjct: 156 FQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRN 215
Query: 277 TVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHA 336
V W ++I Y + +EA ++ M+ K + FTI +++ +L SL + H
Sbjct: 216 VVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHD 275
Query: 337 ALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQ 396
++GF D TAL+D YSK G ++DAR VFD M K++ +WN++I G HG GE+
Sbjct: 276 YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEE 335
Query: 397 AIQMF-EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 455
A+ +F E V P+ +TF+ VLSAC+ +G + G F M + + + P H ACM
Sbjct: 336 ALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACM 395
Query: 456 IELLGREGLLDEAFALIRRAPFEPTKN 482
I+LL + +++A L+ +P N
Sbjct: 396 IQLLEQALEVEKASNLVESMDSDPDFN 422
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 160/340 (47%), Gaps = 34/340 (10%)
Query: 67 QIMKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSI 126
Q+ PST I L + ++ REA+ LF IL + + T+ ++ C+ SI
Sbjct: 77 QLQSPSTFTWNLMIRSLSVNHKPREALLLF-ILMMISHQSQFDKFTFPFVIKACLASSSI 135
Query: 127 RGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGL 186
R +V I +GF D++ N ++ ++ KCG RK+F MP R +VSW T++ GL
Sbjct: 136 RLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGL 195
Query: 187 V-----DSGDY--------------------------SEAFGLFLFMWVEFNDGRSRTFA 215
V DS + EAF LF M V+ T
Sbjct: 196 VSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIV 255
Query: 216 TMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK 275
+++AS LG + +GR +H A K G D F+ ALIDMYSKCGS++DA+ FD M K
Sbjct: 256 NLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGK 315
Query: 276 TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA-KIDHFTISIVIRICVRLASLEHAKQA 334
+ WNS+I +HG EEALS++ EM + + + D T V+ C +++ +
Sbjct: 316 SLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRY 375
Query: 335 HAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHVFDRM 373
+++ +G N ++ + +E A ++ + M
Sbjct: 376 FTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 190/392 (48%), Gaps = 2/392 (0%)
Query: 78 SQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMI 137
+ I L R EA+ LF + E + ++ V +++++ K+V +++
Sbjct: 285 AMIAGLAHNKRQWEALGLFRTMISEEKIYP-NSVILTTILPVLGDVKALKLGKEVHAHVL 343
Query: 138 SS-GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAF 196
S + ++ + ++ ++ KCG M R++F +R+ +SW ++ G +G + +A
Sbjct: 344 KSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQAL 403
Query: 197 GLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMY 256
++M E T AT++ A L I+ G++IH ALK + + +L+ MY
Sbjct: 404 RSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMY 463
Query: 257 SKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTIS 316
SKCG E FD++ ++ W ++I Y + + ++ M S + D T+
Sbjct: 464 SKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMG 523
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK 376
V+ +C L +L+ K+ H +++ F S + ++ Y K G + A FD + K
Sbjct: 524 RVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVK 583
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 436
++W A+I YG + AI FEQM+ PN TF AVLS CS +G + + F
Sbjct: 584 GSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFF 643
Query: 437 YSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
M R + ++P HY+ +IELL R G ++EA
Sbjct: 644 NLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 184/354 (51%), Gaps = 8/354 (2%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
N A+ + + LE G V A+T+ AL+ CV +S+ K+V ++ +G E + +
Sbjct: 90 NNLEVALTILDYLEQRG--IPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEF 147
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGD--YSEAFGLFLFMWV 204
+ +++ M+ CG + DA+K+F + +V SW ++ G V SG Y + F M
Sbjct: 148 LRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRE 207
Query: 205 EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED 264
D + + + ++ AG ++ G + H+ A+K G+ F+ +L+DMY KCG +
Sbjct: 208 LGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGL 267
Query: 265 AQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI--DHFTISIVIRIC 322
A+ FD++ E+ V W ++IAG A + EAL ++ M S KI + ++ ++ +
Sbjct: 268 ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM-ISEEKIYPNSVILTTILPVL 326
Query: 323 VRLASLEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISW 381
+ +L+ K+ HA +++ + ++ L+D Y K G M R VF ++N ISW
Sbjct: 327 GDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISW 386
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 435
AL++GY +G+ +QA++ M +E P+ VT VL C+ ++G EI
Sbjct: 387 TALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 142/283 (50%), Gaps = 3/283 (1%)
Query: 88 RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
R +A+ ++ EG DV T ++ VC LR+I+ K++ Y + + F P++ +
Sbjct: 398 RFDQALRSIVWMQQEGFRPDV--VTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSL 455
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
+ +++M+ KCG+ +LF + +R+V +W +I V++ D +F M + +
Sbjct: 456 VTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH 515
Query: 208 DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQC 267
S T ++ + L +++G+++H LK FV+ +I MY KCG + A
Sbjct: 516 RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANF 575
Query: 268 AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLAS 327
+FD + K ++ W +II Y + +A++ + +M G + FT + V+ IC +
Sbjct: 576 SFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGF 635
Query: 328 LEHAKQAHAALVR-HGFGSDIVANTALVDFYSKWGRMEDARHV 369
++ A + ++R + + +++ ++ GR+E+A+ +
Sbjct: 636 VDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 284 IAGYALHGYSEEALSI--YLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH 341
I +A E AL+I YLE R G ++ T S ++ CVR SL H KQ H + +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQR--GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRIN 140
Query: 342 GFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQG--EQAIQ 399
G S+ T LV Y+ G ++DA+ VFD NV SWNAL+ G G+ + +
Sbjct: 141 GLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLS 200
Query: 400 MFEQM 404
F +M
Sbjct: 201 TFTEM 205
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 153/299 (51%), Gaps = 9/299 (3%)
Query: 127 RGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGL 186
RG ++ +++ S P + +NR+LLMHV CG + R++F MP RD SW V G
Sbjct: 105 RGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGC 164
Query: 187 VDSGDYSEAFGLFLFMWVEFNDGR----SRTFATMVRASAGLGLIQVGRQIHSCALKMGV 242
++ GDY +A LF+ M G S +++A A + ++G+Q+H+ K+G
Sbjct: 165 IEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGF 224
Query: 243 --GGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIY 300
DS+++ +LI Y + +EDA Q+ TV W + + G +E + +
Sbjct: 225 IDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDF 284
Query: 301 LEMRDSGAKIDHFTISIVIRICVRLAS-LEHAKQAHAALVRHGFGSDIVANTALVDFYSK 359
+EM + G K + S V++ C ++ +Q HA ++ GF SD + L++ Y K
Sbjct: 285 IEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGK 344
Query: 360 WGRMEDARHVFDRMHRKNVIS-WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
+G+++DA VF + +S WNA++A Y +G +AI++ QM + I H T L
Sbjct: 345 YGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQM-KATGIKAHDTLL 402
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 126/278 (45%), Gaps = 9/278 (3%)
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM----RDSG 307
L+ M+ CG ++ + FD+MP + W + G G E+A +++ M +
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 308 AKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF--GSDIVANTALVDFYSKWGRMED 365
KI + + V++ C + E KQ HA + GF D + +L+ FY ++ +ED
Sbjct: 189 FKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLED 248
Query: 366 ARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSY 425
A V ++ N ++W A + G+ ++ I+ F +M + N F VL ACS+
Sbjct: 249 ANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSW 308
Query: 426 SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWV 485
R + ++ + + + +IE+ G+ G + +A + + + E + + W
Sbjct: 309 VSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWN 368
Query: 486 ALLTACRMHGNLELGKFAAEKLYEMDPGKLCNYVMLLN 523
A++ + +G + A + LY+M + + LLN
Sbjct: 369 AMVASYMQNG---IYIEAIKLLYQMKATGIKAHDTLLN 403
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 198/442 (44%), Gaps = 85/442 (19%)
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF 199
GF D Y+ N ++ M+VK + ARK+F + +R W +I G G+ EA LF
Sbjct: 131 GFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF 190
Query: 200 LFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKC 259
M ND S T +I ++K
Sbjct: 191 DMM--PENDVVSWT-------------------------------------VMITGFAKV 211
Query: 260 GSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVI 319
+E+A+ FD+MPEK+ V WN++++GYA +G++E+AL ++ +M G + + T IVI
Sbjct: 212 KDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVI 271
Query: 320 RIC--------------------------VRLASLE-HAK-----QAHAALVRHGFGSDI 347
C V+ A L+ HAK A G ++
Sbjct: 272 SACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNL 331
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRE 407
V A++ Y++ G M AR +FD M ++NV+SWN+LIAGY ++GQ AI+ FE M+
Sbjct: 332 VTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDY 391
Query: 408 -RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 466
P+ VT ++VLSAC + E G + R +++K Y +I + R G L
Sbjct: 392 GDSKPDEVTMISVLSACGHMADLELG-DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLW 450
Query: 467 EAFALIRRAPFEPTKNMWV----ALLTACRMHGN--LELGKFAAEKLYEMDPGKLCNYVM 520
EA + F+ K V L TA +G+ L + K ++P ++ Y
Sbjct: 451 EA-----KRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRV-TYTS 504
Query: 521 LLNIYNSSGKLKEAAGVLQTLK 542
+L N +G LKE + ++++
Sbjct: 505 VLTACNRAGLLKEGQRIFKSIR 526
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 158/329 (48%), Gaps = 44/329 (13%)
Query: 163 DARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLF---LFMWVEFNDGRSRTFATMVR 219
+ARK F MPE+ VVSW ++ G +G +A LF L + V N+ T+ ++
Sbjct: 216 NARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNET---TWVIVIS 272
Query: 220 ASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKC-------------------- 259
A + + R + + V + FV AL+DM++KC
Sbjct: 273 ACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLV 332
Query: 260 ------------GSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSG 307
G + A+ FD MP++ V WNS+IAGYA +G + A+ + +M D G
Sbjct: 333 TWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYG 392
Query: 308 -AKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDA 366
+K D T+ V+ C +A LE + ++ + +L+ Y++ G + +A
Sbjct: 393 DSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEA 452
Query: 367 RHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYS 426
+ VFD M ++V+S+N L + +G G + + + +M E + P+ VT+ +VL+AC+ +
Sbjct: 453 KRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRA 512
Query: 427 GLSERGWEIFYSMSRDHKVKPRAMHYACM 455
GL + G IF S+ P A HYACM
Sbjct: 513 GLLKEGQRIFKSIR-----NPLADHYACM 536
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 17/236 (7%)
Query: 269 FDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
FD + NS+ ++ + + L +Y + G D F+ +VI+ R L
Sbjct: 63 FDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGIL 122
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVISWNALIAGY 388
A + + GF D ++D Y K +E AR VFD++ ++ WN +I+GY
Sbjct: 123 -----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGY 177
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 448
G E+A ++F+ M V V++ +++ + E + F D +
Sbjct: 178 WKWGNKEEACKLFDMMPENDV----VSWTVMITGFAKVKDLENARKYF-----DRMPEKS 228
Query: 449 AMHYACMIELLGREGLLDEAFALIR---RAPFEPTKNMWVALLTACRMHGNLELGK 501
+ + M+ + G ++A L R P + WV +++AC + L +
Sbjct: 229 VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTR 284
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 10/187 (5%)
Query: 506 KLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR-------MLPTCTWIEVK 558
++ E P K+ + + N+ SG + A G+ ++ R +R + P+ +V+
Sbjct: 54 QVKETSP-KVFDKLPERNLDTWSGGRETARGLSGSVVRNTVRKDTTLRHISPSSHSTKVR 112
Query: 559 KQPHAFLCGDKSH-TQTKEIYQKVDEILDEISRHGYIKENEMLLPDVDEE-EQRLQQYHS 616
G+K + Y K+ + E+ GY+ E + +L D+DEE +++ +HS
Sbjct: 113 GDKPEISGGEKKAIVDRSKAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHS 172
Query: 617 EKLAIAFGLINTPDWTPLQITQGHRVCGDCHNAIKLIAMVTGREIVVRDASRFHHFRNAT 676
E+LAIAFG+INTP T +++ + R+CGDCHN IK+++ + REI+VRD RFHHFR+
Sbjct: 173 ERLAIAFGIINTPPGTTIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGN 232
Query: 677 CSCGDYW 683
CSCGDYW
Sbjct: 233 CSCGDYW 239
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 189/408 (46%), Gaps = 20/408 (4%)
Query: 80 IEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISS 139
I L CNR EA++L E + L G C + D ++ +C I K+ N M+
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMG-CVPDAETFNDVILGLC-KFDRINEAAKMVNRMLIR 316
Query: 140 GFEPDL----YMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
GF PD Y+MN + K G + A+ LF +P+ ++V + T+I G V G +A
Sbjct: 317 GFAPDDITYGYLMNGL----CKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 196 FGLFLFMWVEFNDGRSR-TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALID 254
+ M + T+ +++ GL+ + ++ G + + L+D
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 255 MYSKCGSIEDAQCAFDQMP----EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI 310
+ K G I++A ++M + TVG+N +I+ + EA+ I+ EM G K
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
D +T + +I + ++HA ++ G ++ V L++ + + G +++AR +
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 371 DRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYS 426
+ M + + I++N+LI G G+ ++A +FE+MLR+ P++++ +++ S
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612
Query: 427 GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
G+ E E M P + + +I L R G +++ + R+
Sbjct: 613 GMVEEAVEFQKEMVLRGST-PDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 134/319 (42%), Gaps = 39/319 (12%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
+Y LV+ L I V N M + G +P+ N ++ K + +A ++F +M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 172 PER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
P + DV ++ ++I GL + + A L M E + T+ T++ A G I
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY 287
+ R++ + + G D + +NS+I G
Sbjct: 546 KEARKLVNEMVFQGSPLDE-------------------------------ITYNSLIKGL 574
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDI 347
G ++A S++ +M G + + +I+I R +E A + +V G DI
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 634
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNV----ISWNALIAGYGNHGQGEQAIQMFEQ 403
V +L++ + GR+ED +F ++ + + +++N L++ G A + ++
Sbjct: 635 VTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Query: 404 MLRERVIPNHVTFLAVLSA 422
+ + +PNH T+ +L +
Sbjct: 695 GIEDGFVPNHRTWSILLQS 713
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 134/295 (45%), Gaps = 16/295 (5%)
Query: 56 VDRKMPVLDD--AQIMKPSTPGLCSQIEKLGLCNRHR--EAMELFEILELEGDCADVGAS 111
+D VL++ A +KP+T G I C HR EA+E+F + +G DV
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLIS--AFCKEHRIPEAVEIFREMPRKGCKPDV--Y 495
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T+++L++ + I+ + MIS G + N ++ ++ G + +ARKL +M
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 172 ----PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
D +++ ++I GL +G+ +A LF M + + + + ++ G++
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSI 283
+ + + G D +LI+ + G IED F ++ + TV +N++
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTL 675
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAAL 338
++ G+ +A + E + G +H T SI+++ + +L+ + +AA
Sbjct: 676 MSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFYNAAF 730
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 205/461 (44%), Gaps = 33/461 (7%)
Query: 34 PRIRCSSSMEQGLRPKPKKTEYVDRKMPVLDDAQIM--KPSTPGLCSQIEKLGLCNRHRE 91
P ++ SS+ GL K +D M +L + + + KP+ I LG + E
Sbjct: 221 PSLQTYSSLMVGL----GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 92 AMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRV 151
A E+ + ++ EG DV TY L++ R + K+VF M + +PD +
Sbjct: 277 AYEILKRMDDEGCGPDV--VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD-RVTYIT 333
Query: 152 LLMHVKCGLMLDARKLFGDMPERD-----VVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
LL LD+ K F E+D VV++ ++ L +G++ EAF M +
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCAL-----KMGVGGDSFVACALIDMYSKCGS 261
T+ T++ GL++V R + L +GV ++ ID Y K G
Sbjct: 394 ILPNLHTYNTLI-----CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 262 IEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISI 317
A F++M K V N+ + A G EA I+ ++D G D T ++
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH--- 374
+++ ++ ++ A + + ++ +G D++ +L++ K R+++A +F RM
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 375 -RKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 433
+ V+++N L+AG G +G+ ++AI++FE M+++ PN +TF + +
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 434 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
++ + M D P Y +I L + G + EA +
Sbjct: 629 KMLFKM-MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 113/504 (22%), Positives = 218/504 (43%), Gaps = 34/504 (6%)
Query: 69 MKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRG 128
+ P+ + + L R REA ++F L+ G D + TY+ ++ + I
Sbjct: 464 IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD--SVTYNMMMKCYSKVGEIDE 521
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERD----VVSWMTVIG 184
K+ + M+ +G EPD+ ++N ++ K + +A K+F M E VV++ T++
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 185 GLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGG 244
GL +G EA LF M + + TF T+ + + ++ + MG
Sbjct: 582 GLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVP 641
Query: 245 DSFVACALIDMYSKCGSIEDAQCAFDQMPE---KTTVGWNSIIAGYALHGYSEEALSIYL 301
D F +I K G +++A C F QM + V +++ G E+A I
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIIT 701
Query: 302 E-MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF---GSDIVANTALVDFY 357
+ + + + +I + A +++A LV +G G I+ ++ +
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV--PIIRYS 759
Query: 358 SKWGRMEDARHVFDRMHRK-----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPN 412
K + AR +F++ + + ++N LI G E A +F Q+ IP+
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 413 HVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---- 468
T+ +L A SG + +E++ MS H+ + + + +I L + G +D+A
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMST-HECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 469 FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYE--MDPGKLCN---YVMLLN 523
+ L+ F PT + L+ G L + A++L+E +D G N Y +L+N
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRL----YEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 524 IYNSSGKLKEAAGVLQTLKRKGLR 547
+ +G+ A + + + ++G+R
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVR 958
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 144/341 (42%), Gaps = 47/341 (13%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY+ L+ + I + VF + S+G PD+ N +L + K G + + +L+ +M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 172 P----ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
E + ++ VI GLV +G+ +A L+ + +
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD---------------------- 884
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE----KTTVGWNSI 283
R A G LID SK G + +A+ F+ M + +N +
Sbjct: 885 ---RDFSPTACTYG---------PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I G+ G ++ A +++ M G + D T S+++ + ++ L G
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-----NVISWNALIAGYGNHGQGEQAI 398
D+V +++ K R+E+A +F+ M ++ ++N+LI G G E+A
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAG 1052
Query: 399 QMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 439
+++ ++ R + PN TF A++ S SG E + ++ +M
Sbjct: 1053 KIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/455 (20%), Positives = 180/455 (39%), Gaps = 54/455 (11%)
Query: 108 VGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKL 167
+ A +Y+ L+++ + R +V+ MI GF P L + +++
Sbjct: 186 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMV-------------- 231
Query: 168 FGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
G RD+ S M ++ + E GL ++ TF +R G I
Sbjct: 232 -GLGKRRDIDSVMGLLKEM-------ETLGLKPNVY---------TFTICIRVLGRAGKI 274
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM------PEKTTVGWN 281
+I G G D LID ++ A+ F++M P++ T +
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVT--YI 332
Query: 282 SIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH 341
+++ ++ + + + EM G D T +I++ + + A +
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ 392
Query: 342 GFGSDIVANTALVDFYSKWGRMEDARHVFDRMH----RKNVISWNALIAGYGNHGQGEQA 397
G ++ L+ + R++DA +F M + ++ I YG G A
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 398 IQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIE 457
++ FE+M + + PN V A L + + +G +IFY + +D + P ++ Y M++
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMK 511
Query: 458 LLGREGLLDEAFALIRRA---PFEP----TKNMWVALLTACRMHGNLELGKFAAEKLYEM 510
+ G +DEA L+ EP ++ L A R+ ++ F K ++
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM--FMRMKEMKL 569
Query: 511 DPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
P + Y LL +GK++EA + + + +KG
Sbjct: 570 KP-TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 170/406 (41%), Gaps = 62/406 (15%)
Query: 180 MTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALK 239
++++ GL DSG + A +FLF W+ S+ G +++ Q+ ++
Sbjct: 140 VSLVKGLDDSGHWERA--VFLFEWLVL--------------SSNSGALKLDHQVIEIFVR 183
Query: 240 -MGVGGDSFVACALID-------------------MYSKCGSIEDAQCAFDQM----PEK 275
+G VA L+D YS+ G E A F++M P
Sbjct: 184 ILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSP 243
Query: 276 TTVGWNSIIAGYALHGYS-EEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQA 334
T V +N I+ + G S + L + EMR G K D FT S V+ C R L AK+
Sbjct: 244 TLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEF 303
Query: 335 HAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGN 390
A L G+ V AL+ + K G +A V M + +++N L+A Y
Sbjct: 304 FAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVR 363
Query: 391 HGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 450
G ++A + E M ++ V+PN +T+ V+ A +G + ++FYSM ++ P
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTC 422
Query: 451 HYACMIELLGREGLLDEAFALI---RRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKL 507
Y ++ LLG++ +E ++ + P + W +L C GN + KF
Sbjct: 423 TYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC---GNKGMDKFVNRVF 479
Query: 508 YEMDPGKLC-------NYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
EM K C + L++ Y G +A+ + + R G
Sbjct: 480 REM---KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 183/435 (42%), Gaps = 42/435 (9%)
Query: 74 PGLCSQIEKLGLCNRHREAMELFEIL-ELEGDCADVGASTYDALVNVCVGLRSIRGVKKV 132
P C+ L L + + E+ ++L +++ + +T++ ++ +C + V +V
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRV 478
Query: 133 FNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERD----VVSWMTVIGGLVD 188
F M S GFEPD N ++ + +CG +DA K++G+M V ++ ++ L
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV 248
GD+ + +D +S+ F + +S L+ G +++
Sbjct: 539 KGDWRSGENV-------ISDMKSKGF-------------KPTETSYSLMLQCYAKGGNYL 578
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
I+ I++ Q M +T + N AL G SE A +++ + G
Sbjct: 579 GIERIE-----NRIKEGQIFPSWMLLRTLLLAN--FKCRALAG-SERAFTLF---KKHGY 627
Query: 309 KIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARH 368
K D + ++ I R + A+ ++ G D+V +L+D Y + G A
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 369 VFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACS 424
+ + + +++S+N +I G+ G ++A++M +M + P T+ +S +
Sbjct: 688 ILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT 747
Query: 425 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR-APFEPTKNM 483
G+ ++ M+++ +P + + +++ R G EA + + F+P +
Sbjct: 748 AMGMFAEIEDVIECMAKND-CRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDD 806
Query: 484 WVALLTACRMHGNLE 498
A R+ NLE
Sbjct: 807 QSIQRLALRVRENLE 821
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 187/461 (40%), Gaps = 35/461 (7%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T +++ C +R K+ F + S G+EP N +L + K G+ +A + +M
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 342
Query: 172 PER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
E D V++ ++ V +G EA G+ M + + T+ T++ A G
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM------PEKTTVGWN 281
++ + G ++ A++ + K + M P + T WN
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRAT--WN 460
Query: 282 SIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH 341
+++A G + ++ EM+ G + D T + +I R S A + + + R
Sbjct: 461 TMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA 520
Query: 342 GFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV----ISWNALIAGYGNHGQGEQA 397
GF + + AL++ ++ G +V M K S++ ++ Y G
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN-YLG 579
Query: 398 IQMFEQMLRE-RVIPNHVTFLAVLSA---CSYSGLSERGWEIFYSMSRDHKVKPRAMHYA 453
I+ E ++E ++ P+ + +L A C SER + +F + H KP + +
Sbjct: 580 IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLF----KKHGYKPDMVIFN 635
Query: 454 CMIELLGREGLLDEAFAL---IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM 510
M+ + R + D+A + IR P + +L+ G E K A E L +
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG--ECWK-AEEILKTL 692
Query: 511 DPGK----LCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
+ + L +Y ++ + G ++EA +L + +G+R
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIR 733
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 105/501 (20%), Positives = 207/501 (41%), Gaps = 43/501 (8%)
Query: 70 KPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV 129
+P T + ++ G + EA+ + + E+E + + TY+ LV V +
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLK--EMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVV----SWMTVIGG 185
V M G P+ V+ + K G +A KLF M E V ++ V+
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQ----VGRQIHSCALKMG 241
L +E + M T+ TM+ G+ + V R++ SC G
Sbjct: 431 LGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC----G 486
Query: 242 VGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGY-------ALHGYSE 294
D LI Y +CGS DA + +M T G+N+ + Y A G
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEM---TRAGFNACVTTYNALLNALARKGDWR 543
Query: 295 EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG--FGSDIVANTA 352
++ +M+ G K + S++++ + + ++ ++ G F S ++ T
Sbjct: 544 SGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENR-IKEGQIFPSWMLLRTL 602
Query: 353 LVDFYS--KWGRMEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
L+ + E A +F + ++ +++ +N++++ + + +QA + E + + +
Sbjct: 603 LLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGL 662
Query: 410 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 469
P+ VT+ +++ G + EI ++ + ++KP + Y +I+ R GL+ EA
Sbjct: 663 SPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS-QLKPDLVSYNTVIKGFCRRGLMQEAV 721
Query: 470 ALIRRA------PFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMD--PGKLCNYVML 521
++ P T N +V+ TA M +E E + + D P +L + M+
Sbjct: 722 RMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIE---DVIECMAKNDCRPNEL-TFKMV 777
Query: 522 LNIYNSSGKLKEAAGVLQTLK 542
++ Y +GK EA + +K
Sbjct: 778 VDGYCRAGKYSEAMDFVSKIK 798
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 174/426 (40%), Gaps = 53/426 (12%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP 143
GLC R I E A TY+ ++N V R GV+ V M G
Sbjct: 233 GLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVY 292
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVD----SGDYSEAFGLF 199
+ ++ + VK G M DA KLF +M ER + S + V L+ G+ AF LF
Sbjct: 293 NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLF 352
Query: 200 LFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKC 259
+ + G+ S+ ALID K
Sbjct: 353 DELT-----------------------------------EKGLSPSSYTYGALIDGVCKV 377
Query: 260 GSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTI 315
G + A+ ++M K T V +N++I GY G +EA IY M G + D FT
Sbjct: 378 GEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTC 437
Query: 316 SIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHR 375
+ + RL + AKQ ++ G V+ T L+D Y K G +E+A+ +F M
Sbjct: 438 NTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 376 K----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 431
K N I++N +I Y G+ ++A ++ M + P+ T+ +++ + +
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDE 557
Query: 432 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL---IRRAPFEPTKNMWVALL 488
+F M + ++ Y MI L + G DEAF L ++R + ++ AL+
Sbjct: 558 AMRLFSEMGL-KGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Query: 489 TACRMH 494
+ MH
Sbjct: 617 GS--MH 620
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 189/445 (42%), Gaps = 45/445 (10%)
Query: 131 KVFNYMISSGFEPDLYMMNR---VLLMHVKCGLMLDA-----RKLFGDMPERDVVSWMTV 182
+VF+YM+ G D R V L+ K +D R++ + V S V
Sbjct: 175 RVFDYMVKKGLSID----ERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 183 IGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRA-------SAGLGLIQVGRQIHS 235
+ GL G+ ++ L V+ + T+ T++ A S G+++V +
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK---- 286
Query: 236 CALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG----WNSIIAGYALHG 291
K GV + L+++ K G + DA+ FD+M E+ + S+I+ G
Sbjct: 287 ---KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 292 YSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANT 351
+ A ++ E+ + G +T +I ++ + A+ + G V
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 352 ALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRE 407
L+D Y + G +++A ++D M +K +V + N + + + + ++A Q +M+
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463
Query: 408 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 467
V + V++ ++ G E +F MS V+P A+ Y MI ++G + E
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS-SKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 468 AFALIRRAPFE-----PTKNMWVALLTACRMHGNLE--LGKFAAEKLYEMDPGKLCNYVM 520
A L RA E P + +L+ + N++ + F+ L +D + Y +
Sbjct: 523 ARKL--RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSV-TYTV 579
Query: 521 LLNIYNSSGKLKEAAGVLQTLKRKG 545
+++ + +GK EA G+ +KRKG
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 123/287 (42%), Gaps = 23/287 (8%)
Query: 276 TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAH 335
T ++ G G E++ + E G K + +T + +I V+ +
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 336 AALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVIS----WNALIAGYGNH 391
+ + G + V T L++ K G+M DA +FD M + + S + +LI+
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 392 GQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG-WEIFYSMSRDHKVKPRAM 450
G ++A +F+++ + + P+ T+ A++ G E G EI + + V +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG--EMGAAEILMNEMQSKGVNITQV 400
Query: 451 HYACMIELLGREGLLDEA---FALIRRAPFEP---TKNMWVALLTACRMHGNLELGKFAA 504
+ +I+ R+G++DEA + ++ + F+ T N + + + A
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDE------AK 454
Query: 505 EKLYEMDPGKL----CNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
+ L+ M G + +Y L+++Y G ++EA + + KG++
Sbjct: 455 QWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQ 501
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 199/456 (43%), Gaps = 56/456 (12%)
Query: 70 KPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV 129
+P+T + I L L N+ EAM L + + +G D+ TY +VN
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL--VTYGVVVNGLCKRGDTDLA 240
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGG 185
+ N M EP + + N ++ K M DA LF +M + +VV++ ++I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD 245
L + G +S+A SR + M+ R+I+ D
Sbjct: 301 LCNYGRWSDA---------------SRLLSDMIE-----------RKINP---------D 325
Query: 246 SFVACALIDMYSKCGSIEDAQCAFDQMPEKTT----VGWNSIIAGYALHGYSEEALSIYL 301
F ALID + K G + +A+ +D+M +++ V ++S+I G+ +H +EA ++
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
M D T + +I+ + +E + + + G + V L+ + G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 362 RMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
+ A+ +F M N++++N L+ G +G+ E+A+ +FE + R ++ P T+
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 418 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPF 477
++ +G E GW++F ++S VKP + Y MI R+G +EA AL +
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 478 E---PTKNMWVALLTACRMHGNLELGKFAAEKLYEM 510
+ P + L+ A G+ E +AE + EM
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREA---SAELIKEM 597
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 179/396 (45%), Gaps = 31/396 (7%)
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMV-------RASAGLG 225
E ++V+ +++ G S SEA L M+V + TF T++ +AS +
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 226 LIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP----EKTTVGWN 281
LI R + G D +++ K G + A ++M E + +N
Sbjct: 208 LID--RMVAK-----GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 282 SIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH 341
+II G + + ++AL+++ EM G + + T S +I A + + ++
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 342 GFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQA 397
D+ +AL+D + K G++ +A ++D M ++ +++++++LI G+ H + ++A
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 398 IQMFEQMLRERVIPNHVTFLAVLSA-CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMI 456
QMFE M+ + P+ VT+ ++ C Y + E G E+F MS+ V + Y +I
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV-EEGMEVFREMSQRGLVG-NTVTYNILI 438
Query: 457 ELLGREGLLD---EAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLY--EMD 511
+ L + G D E F + P + LL +G LE E L +M+
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 512 PGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
P + Y +++ +GK+++ + L KG++
Sbjct: 499 P-TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 122/284 (42%), Gaps = 11/284 (3%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA +L++ E+ D TY +L+N + K++F +M+S PD+ N
Sbjct: 344 EAEKLYD--EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 151 VLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
++ K + + ++F +M +R + V++ +I GL +GD A +F M +
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
T+ T++ G ++ + + + + +I+ K G +ED
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 267 CAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC 322
F + K V +N++I+G+ G EEA +++ EM++ G + + +IR
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 323 VRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDA 366
+R E + + + GF D + LV GR++ +
Sbjct: 582 LRDGDREASAELIKEMRSCGFAGD-ASTIGLVTNMLHDGRLDKS 624
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 159/335 (47%), Gaps = 14/335 (4%)
Query: 161 MLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRA 220
++D+ FG +P +VV + TVI GL + D + A +F M + + T+ T++
Sbjct: 171 LVDSMDGFGFVP--NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Query: 221 SAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTV-- 278
+ G ++ +K + + ALID + K G++ +A+ + +M ++ V
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 279 --GWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHA 336
+NS+I G+ +HG +A ++ M G D T + +I + +E +
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 337 ALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH----RKNVISWNALIAGYGNHG 392
+ G D L+ Y + G++ A+ VF+RM +++++N L+ N+G
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408
Query: 393 QGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 452
+ E+A+ M E + + + + +T+ ++ + + W +F S++R VKP A+ Y
Sbjct: 409 KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR-KGVKPDAIAY 467
Query: 453 ACMIELLGREGLLDEAFALIRRAP---FEPTKNMW 484
MI L R+GL EA L RR F P++ ++
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 155/344 (45%), Gaps = 14/344 (4%)
Query: 112 TYDALVN-VCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
T +L+N C G R V V + M GF P++ + N V+ K + +A ++F
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLV-DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYC 209
Query: 171 MPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL 226
M ++ D V++ T+I GL +SG +++A L M D F ++ G
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNS 282
+ R ++ ++ V + F +LI+ + G + DA+ FD M K V +N+
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 283 IIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
+I G+ E+ + ++ EM G D FT + +I + L A++ +V G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAI 398
DIV L+D G++E A + + + + ++I++N +I G + ++A
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449
Query: 399 QMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 442
+F + R+ V P+ + ++ ++S GL ++ M D
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 133/296 (44%), Gaps = 13/296 (4%)
Query: 261 SIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIR 320
S+ D+ F +P V +N++I G + AL ++ M G + D T + +I
Sbjct: 170 SLVDSMDGFGFVPN--VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 321 ICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK---- 376
A + +V+ +++ TAL+D + K G + +AR+++ M R+
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Query: 377 NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 436
NV ++N+LI G+ HG A MF+ M+ + P+ VT+ +++ S E G ++F
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 437 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR---APFEPTKNMWVALLTACRM 493
M+ V A Y +I + G L+ A + R P + LL
Sbjct: 348 CEMTYQGLVGD-AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 494 HGNLELGKFAAEKLY--EMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
+G +E E L EMD + Y +++ + KLKEA + ++L RKG++
Sbjct: 407 NGKIEKALVMVEDLQKSEMDV-DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 195/482 (40%), Gaps = 51/482 (10%)
Query: 80 IEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISS 139
I LG R A +F L+ +G DV +Y +L++ R VF M
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDV--YSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM--PERDVVSWMTVIGGLVDSGDYSEAFG 197
G +P L N +L +FG M P + S ++ + G +A+
Sbjct: 238 GCKPTLITYNVIL-------------NVFGKMGTPWNKITS---LVEKMKSDGIAPDAY- 280
Query: 198 LFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYS 257
T+ T++ L Q Q+ G D AL+D+Y
Sbjct: 281 ---------------TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 258 KCGSIEDAQCAFDQMP----EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHF 313
K ++A ++M + V +NS+I+ YA G +EA+ + +M + G K D F
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 314 TISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM 373
T + ++ R +E A + G +I A + Y G+ + +FD +
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 374 H----RKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLS 429
+ ++++WN L+A +G +G + +F++M R +P TF ++SA S G
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 430 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRRAPFEPTKNMWVA 486
E+ ++ M D V P Y ++ L R G+ +++ A + +P + + +
Sbjct: 506 EQAMTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 487 LLTACRMHGNLELGKFAAEKLYE--MDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRK 544
LL A + L AE++Y ++P + ++L + + L EA LK +
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL-VCSKCDLLPEAERAFSELKER 623
Query: 545 GL 546
G
Sbjct: 624 GF 625
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/505 (19%), Positives = 188/505 (37%), Gaps = 127/505 (25%)
Query: 86 CNR---HREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFE 142
C R H+EA ++FE ++ G D TY+AL++V + KV N M+ +GF
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYD--KVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS 346
Query: 143 PDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGL 198
P + N ++ + + G++ +A +L M E+ DV ++ T++ G +G A +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 199 FLFMWVEFNDGRSRTFATMVRASAGLG----LIQVGRQIHSCALKMGV------------ 242
F M TF ++ G ++++ +I+ C L +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 243 -GGDSFVA------------------CALIDMYSKCGSIEDAQCAFDQM------PEKTT 277
G DS V+ LI YS+CGS E A + +M P+ +T
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 278 VGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFT----------------------- 314
+N+++A A G E++ + EM D K + T
Sbjct: 527 --YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 315 ------------ISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
+ ++ +C + L A++A + L GF DI ++V Y +
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Query: 363 MEDARHVFDRMHRK---------------------------------------NVISWNA 383
+ A V D M + ++IS+N
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
+I Y + + A ++F +M ++P+ +T+ + + + + E + M + H
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-H 763
Query: 444 KVKPRAMHYACMIELLGREGLLDEA 468
+P Y +++ + DEA
Sbjct: 764 GCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 166/375 (44%), Gaps = 38/375 (10%)
Query: 70 KPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV 129
KP+ + I+ G + E M++F+ + + G D+ T++ L+ V V
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI--VTWNTLLAVFGQNGMDSEV 473
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGG 185
VF M +GF P+ N ++ + +CG A ++ M + D+ ++ TV+
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSR----TFATMVRASAGLGLIQVGRQI---HSCAL 238
L G + ++ + E DGR + T+ +++ A A G++I HS A
Sbjct: 534 LARGGMWEQSEKVL----AEMEDGRCKPNELTYCSLLHAYAN------GKEIGLMHSLAE 583
Query: 239 KMGVG---GDSFVACALIDMYSKCGSIEDAQCAFDQM------PEKTTVGWNSIIAGYAL 289
++ G + + L+ + SKC + +A+ AF ++ P+ TT+ NS+++ Y
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL--NSMVSIYGR 641
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
+A + M++ G T + ++ + R A +++ ++ G DI++
Sbjct: 642 RQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIIS 701
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQML 405
++ Y + RM DA +F M +VI++N I Y E+AI + M+
Sbjct: 702 YNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI 761
Query: 406 RERVIPNHVTFLAVL 420
+ PN T+ +++
Sbjct: 762 KHGCRPNQNTYNSIV 776
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 160/353 (45%), Gaps = 14/353 (3%)
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPE----RDVVSWMTVIG 184
K++F + G+ +Y + ++ + + GL +A +F M E ++V++ VI
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 185 GLVDSG-DYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVG 243
G ++ + F M TF +++ + GL + R + +
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 244 GDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSI 299
D F L+D K G ++ A QMP K V ++++I G+A G +EAL++
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 300 YLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSK 359
+ EMR G +D + + ++ I ++ E A + G D+V AL+ Y K
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 360 WGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVT 415
G+ ++ + VF M R+ N+++++ LI GY G ++A+++F + + + V
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVL 551
Query: 416 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 468
+ A++ A +GL + M+++ + P + Y +I+ GR +D +
Sbjct: 552 YSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRS 603
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 14/313 (4%)
Query: 248 VACALIDMYSKCGSIEDA----QCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM 303
+A A+I + G + A + AF T ++++I+ Y G EEA+S++ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 304 RDSGAKIDHFTISIVIRICVRLA-SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
++ G + + T + VI C + + + + R+G D + +L+ S+ G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 363 MEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLA 418
E AR++FD M + +V S+N L+ GQ + A ++ QM +R++PN V++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 419 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE 478
V+ + +G + +F M R + + Y ++ + + G +EA ++R
Sbjct: 415 VIDGFAKAGRFDEALNLFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 479 PTKN---MWVALLTACRMHGNL-ELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEA 534
K + ALL G E+ K E E L Y L++ Y+ G KEA
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 535 AGVLQTLKRKGLR 547
+ + K GLR
Sbjct: 534 MEIFREFKSAGLR 546
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 173/379 (45%), Gaps = 18/379 (4%)
Query: 112 TYDALVN-VCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
T+ +L+N C+G R + V N M+ G +PD+ M ++ K G + A LF
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMV-NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 171 MPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL 226
M DVV + +++ GL +SG + +A L M TF ++ A G
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNS 282
++++ ++M + + F +LI+ + G +++A+ F M K V + S
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 283 IIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
+I G+ ++A+ I+ EM G + T + +I+ ++ A++ + +V G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-------NVISWNALIAGYGNHGQGE 395
+I L+ G+++ A +F+ M ++ N+ ++N L+ G +G+ E
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 396 QAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 455
+A+ +FE M + + +T+ ++ +G + +F S+ VKP + Y M
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP-SKGVKPNVVTYTTM 501
Query: 456 IELLGREGLLDEAFALIRR 474
I L REGL EA L R+
Sbjct: 502 ISGLFREGLKHEAHVLFRK 520
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 148/357 (41%), Gaps = 24/357 (6%)
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGV---GGDSFVACALIDMYSKCGSIEDA 265
+ + F ++ L ++ V +++C L M ++A + + K G
Sbjct: 83 AKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGF---- 138
Query: 266 QCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRL 325
E V + S+I G+ L EEA+S+ +M + G K D + +I +
Sbjct: 139 --------EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 326 ASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDA----RHVFDRMHRKNVISW 381
+ +A + +G D+V T+LV+ GR DA R + R + +VI++
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 441
NALI + G+ A +++ +M+R + PN T+ ++++ G + ++FY M
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM-E 309
Query: 442 DHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGK 501
P + Y +I + +D+A + + + T + G +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 502 FAAEKLYEM----DPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTW 554
A E M P + Y +LL+ +GK+K+A + + ++++ + + W
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 176/449 (39%), Gaps = 45/449 (10%)
Query: 113 YDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
+ L+NV ++ V + +++ G DLY N ++ + A G M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 173 ----ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQ 228
E D+V++ ++I G EA + M + T++ + G +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKT----TVGWNSII 284
+ G+ D + +L++ G DA M ++ + +N++I
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 285 AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFG 344
+ G +A +Y EM + FT + +I ++ A+Q + G
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 345 SDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQM 400
D+VA T+L++ + K +++DA +F M +K N I++ LI G+G G+ A ++
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 401 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK--VKPRAMHYACMIEL 458
F M+ V PN T+ +L Y+G ++ IF M + V P Y ++
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 459 LGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCNY 518
L G L++A + F + EMD G +
Sbjct: 435 LCYNGKLEKALMV------------------------------FEDMRKREMDIGIITYT 464
Query: 519 VMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
+++ + +GK+K A + +L KG++
Sbjct: 465 IIIQGMC-KAGKVKNAVNLFCSLPSKGVK 492
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 135/308 (43%), Gaps = 15/308 (4%)
Query: 84 GLCN--RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGF 141
GLCN R R+A L + DV T++AL++ V ++++N MI
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDV--ITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFG 197
P+++ ++ G + +AR++F M + DVV++ ++I G +A
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 198 LFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYS 257
+F M + G + T+ T+++ +G V +++ S + GV + L+
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 258 KCGSIEDAQCAFDQMPEKTTVG-------WNSIIAGYALHGYSEEALSIYLEMRDSGAKI 310
G ++ A F+ M ++ G +N ++ G +G E+AL ++ +MR I
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
T +I+I+ + +++A +L G ++V T ++ + G +A +F
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 371 DRMHRKNV 378
+M V
Sbjct: 519 RKMKEDGV 526
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 141/390 (36%), Gaps = 52/390 (13%)
Query: 70 KPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV 129
+P S I L NR EAM + + G DV Y +++ +
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV--VMYTTIIDSLCKNGHVNYA 196
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGG 185
+F+ M + G PD+ M ++ G DA L M +R DV+++ +I
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD 245
V G + +A L+ M T+ +++ G + RQ+ G D
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 246 SFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYL 301
+LI+ + KC ++DA F +M +K T+ + ++I G+ G A ++
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH---GFGSDIVANTALVDFYS 358
M G + T ++++ ++ A + + G +I L+
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 359 KWGRMEDARHVFDRMHRK---------------------------------------NVI 379
G++E A VF+ M ++ NV+
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 380 SWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
++ +I+G G +A +F +M + V
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 199/451 (44%), Gaps = 19/451 (4%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
+Y+ L+N + V M+ G+EPD+ ++ +L + + +A L M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 172 ----PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
+ + V++ T+I GL SEA L M T+ T+V G I
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSI 283
+ + K + D + +ID ++ DA F +M K V +NS+
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I +G +A + +M + + T S +I V+ L A++ + +++
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQ 399
DI ++L++ + R+++A+H+F+ M K NV+++N LI G+ + E+ ++
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 459
+F +M + ++ N VT+ ++ +G + +IF M D V P + Y+ +++ L
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGL 475
Query: 460 GREGLLDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLELG--KFAAEKLYEMDPGK 514
+ G L++A F ++++ EP + ++ G +E G F + L + P
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 515 LCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
+ Y +++ + G +EA + + +K G
Sbjct: 536 II-YTTMISGFCRKGLKEEADALFREMKEDG 565
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 177/406 (43%), Gaps = 15/406 (3%)
Query: 70 KPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV 129
+P+T + I L L N+ EA+ L + + G D+ TY +VN I
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL--FTYGTVVNGLCKRGDIDLA 239
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGG 185
+ M E D+ + ++ + DA LF +M + +VV++ ++I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD 245
L + G +S+A L M + TF+ ++ A G + +++ +K + D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 246 SFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYL 301
F +LI+ + +++A+ F+ M K V +N++I G+ EE + ++
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
EM G + T + +I+ + + A++ +V G DI+ + L+D K+G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 362 RMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
++E A VF+ + + ++ ++N +I G G+ E +F + + V PN + +
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 418 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 463
++S GL E +F M D + P + Y +I R+G
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNTLIRARLRDG 584
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 177/397 (44%), Gaps = 33/397 (8%)
Query: 173 ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMV-------RASAGLG 225
E D+V+ +++ G SEA L M+V + TF T++ +AS +
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 226 LIQ--VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP----EKTTVG 279
LI V R G D F +++ K G I+ A +M E V
Sbjct: 207 LIDRMVAR---------GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 280 WNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALV 339
+ +II + +AL+++ EM + G + + T + +IR A + + ++
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 340 RHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGE 395
++V +AL+D + K G++ +A ++D M ++ ++ ++++LI G+ H + +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 396 QAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 455
+A MFE M+ + PN VT+ ++ + E G E+F MS+ V + Y +
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV-GNTVTYNTL 436
Query: 456 IELLGREGLLDEAFALIRRAPFE---PTKNMWVALLTACRMHGNLELGKFAAEKLY--EM 510
I+ L + G D A + ++ + P + LL +G LE E L +M
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 511 DPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
+P + Y +++ +GK+++ + +L KG++
Sbjct: 497 EP-DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 102/218 (46%), Gaps = 9/218 (4%)
Query: 262 IEDAQCAFDQM----PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISI 317
++DA F +M P + V +N +++ A + +S+ M++ D ++ +I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM---- 373
+I R + L A +++ G+ DIV ++L++ Y R+ +A + D+M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 374 HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 433
++ N +++N LI G H + +A+ + ++M+ P+ T+ V++ G +
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 434 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 471
+ M + K++ + Y +I+ L +++A L
Sbjct: 241 SLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNL 277
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 14/249 (5%)
Query: 84 GLC--NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGF 141
G C +R EA +FE++ + DC TY+ L+ + + ++F M G
Sbjct: 369 GFCMHDRLDEAKHMFELM-ISKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFG 197
+ N ++ + G A+K+F M D++++ ++ GL G +A
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 198 LFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKM-GVGGDSFVACALIDMY 256
+F ++ + T+ M+ G ++ G + C+L + GV + + +I +
Sbjct: 487 VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF-CSLSLKGVKPNVIIYTTMISGF 545
Query: 257 SKCGSIEDAQCAFDQMPEKTTV----GWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDH 312
+ G E+A F +M E T+ +N++I G + + EMR G D
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 605
Query: 313 FTISIVIRI 321
TIS+VI +
Sbjct: 606 STISMVINM 614
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 180/413 (43%), Gaps = 15/413 (3%)
Query: 71 PSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVK 130
PS L S + NR EA+ L + + G D T+ LV+
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD--TVTFTTLVHGLFQHNKASEAV 190
Query: 131 KVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP----ERDVVSWMTVIGGL 186
+ M+ G +PDL V+ K G A L M E DVV + TVI L
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 187 VDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDS 246
+A LF M + T+++++ G ++ S L+ + +
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 247 FVACALIDMYSKCGSIEDAQCAFDQMPEKTT----VGWNSIIAGYALHGYSEEALSIYLE 302
+LID ++K G + +A+ FD+M +++ V +NS+I G+ +H +EA I+
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
M D T + +I + + + + R G + V T L+ + +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 363 MEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLA 418
++A+ VF +M N++++N L+ G +G+ E+A+ +FE + + ++ P+ T+
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 419 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 471
+ +G E GW++F S+S VKP + Y MI ++GL +EA+ L
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSL-KGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 180/449 (40%), Gaps = 20/449 (4%)
Query: 34 PRIRCSSSMEQGLRPKPKKTEYVDRKMPVLDDAQIMKPSTPGLCSQIEKL-GLCNRHREA 92
P +++ GL K +E V L + ++K P L + + GLC R
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAV-----ALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 93 MELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVL 152
+ L + ++E + Y +++ R + +F M + G PD++ + ++
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 153 LMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
G DA +L DM ER +VV++ ++I G EA LF M D
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
T+ +++ + +QI + + D LI+ + K + D
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 269 FDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
F M + TV + ++I G+ + A ++ +M G + T + ++ +
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVIS 380
LE A L + DI + + K G++ED +F + K +VI+
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 440
+N +I+G+ G E+A +F +M + +P+ T+ ++ A G E+ M
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM- 581
Query: 441 RDHKVKPRAMHYACMIELLGREGLLDEAF 469
R + A Y + ++L +G LD+ F
Sbjct: 582 RSCRFAGDASTYGLVTDML-HDGRLDKGF 609
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 174/390 (44%), Gaps = 25/390 (6%)
Query: 176 VVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHS 235
+V+ +++ G SEA L M + TF T+V GL Q + +
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH-----GLFQHNKASEA 189
Query: 236 CAL--KMGVGG---DSFVACALIDMYSKCGSIEDAQCAFDQMP----EKTTVGWNSIIAG 286
AL +M V G D A+I+ K G + A ++M E V ++++I
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 287 YALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSD 346
+ + ++AL+++ EM + G + D FT S +I A + + ++ +
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 347 IVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFE 402
+V +L+D ++K G++ +A +FD M ++ N++++N+LI G+ H + ++A Q+F
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 403 QMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 462
M+ + +P+ VT+ +++ + G E+F MSR V + Y +I +
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG-NTVTYTTLIHGFFQA 428
Query: 463 GLLDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLY--EMDPGKLCN 517
D A F + P + LL +G LE E L +M+P +
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP-DIYT 487
Query: 518 YVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
Y ++ +GK+++ + +L KG++
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 194/451 (43%), Gaps = 19/451 (4%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY L+N + V M+ G+EPD+ +N +L + DA L G M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 172 PER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
E D ++ T+I GL SEA L M V+ T+ +V G I
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSI 283
+ + + + + +ID ++ DA F +M K V +NS+
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I +G +A + +M + + T S +I V+ L A++ + +++
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQ 399
DI ++L++ + R+++A+H+F+ M K NV+++N LI G+ + ++ ++
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 459
+F +M + ++ N VT+ ++ + + +F M D V P M Y+ +++ L
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD-GVLPDIMTYSILLDGL 476
Query: 460 GREGLLDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLELG--KFAAEKLYEMDPGK 514
G ++ A F ++R+ EP + ++ G +E G F + L + P
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-N 535
Query: 515 LCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
+ Y +++ + G +EA + + +K +G
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 169/370 (45%), Gaps = 16/370 (4%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP----ERDVVSWMTVIGGLVDSGD 191
M+ G +PDL V+ K G + A L M E VV + T+I L + +
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 192 YSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACA 251
++A LF M + T+ +++R G ++ S ++ + + A
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKTT----VGWNSIIAGYALHGYSEEALSIYLEMRDSG 307
LID + K G + +A+ +D+M +++ ++S+I G+ +H +EA ++ M
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 308 AKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDAR 367
+ T + +I+ + ++ + + + G + V T L+ + + ++A+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 368 HVFDRMHRKNVI----SWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSAC 423
VF +M V+ +++ L+ G N+G+ E A+ +FE + R ++ P+ T+ ++
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 424 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE---PT 480
+G E GW++F S+S VKP + Y M+ R+GL +EA AL R E P
Sbjct: 512 CKAGKVEDGWDLFCSLSL-KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570
Query: 481 KNMWVALLTA 490
+ L+ A
Sbjct: 571 SGTYNTLIRA 580
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 172/424 (40%), Gaps = 49/424 (11%)
Query: 63 LDDAQIMKPSTPGLCSQ-IEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCV 121
L D ++K P L + I GLC R + L + ++E + G Y+ +++
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 122 GLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVV 177
+++ +F M + G P++ N ++ G DA +L DM ER +VV
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 178 SWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCA 237
++ +I V G EA +++
Sbjct: 328 TFSALIDAFVKEGKLVEA-----------------------------------EKLYDEM 352
Query: 238 LKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYS 293
+K + D F +LI+ + +++A+ F+ M K V +N++I G+
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 294 EEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTAL 353
+E + ++ EM G + T + +I + ++A+ +V G DI+ + L
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 354 VDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERV 409
+D G++E A VF+ + R ++ ++N +I G G+ E +F + + V
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 410 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 469
PN VT+ ++S GL E +F M + + P + Y +I R+G +
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASA 591
Query: 470 ALIR 473
LIR
Sbjct: 592 ELIR 595
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 16/342 (4%)
Query: 88 RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
R +EA L ++EL+G DV +Y +VN + V K+ M G +P+ Y+
Sbjct: 261 RIKEAHHLLLLMELKGYTPDV--ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
++ + + + +A + F +M + D V + T+I G GD A F M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 204 VEFNDGRSRTFATMVRASAGLG-LIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSI 262
T+ ++ +G +++ G+ H K G+ DS LI+ Y K G +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHM 437
Query: 263 EDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIV 318
+DA + M + V + ++I G G + A + EM G + + FT + +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 319 IRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-- 376
+ + ++E A + G +D V T L+D Y K G M+ A+ + M K
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 377 --NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTF 416
++++N L+ G+ HG E ++ ML + + PN TF
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 138/293 (47%), Gaps = 19/293 (6%)
Query: 277 TVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHA 336
+ +++++ GY G ++ + M+ G K + + +I + R+ L A++A +
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 337 ALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHG 392
++R G D V T L+D + K G + A F MH + +V+++ A+I+G+ G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 393 QGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 452
+A ++F +M + + P+ VTF +++ +G + + + M + P + Y
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTY 459
Query: 453 ACMIELLGREGLLDEAFALIR---RAPFEPTKNMWVALLTACRMHGNLE-----LGKFAA 504
+I+ L +EG LD A L+ + +P + +++ GN+E +G+F A
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 505 EKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEV 557
L Y L++ Y SG++ +A +L+ + KGL+ PT V
Sbjct: 520 AGL----NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ--PTIVTFNV 566
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 154/359 (42%), Gaps = 19/359 (5%)
Query: 84 GLCNRH--REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGF 141
G C R R A + F + DV TY A+++ + + K+F+ M G
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDV--LTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFG 197
EPD ++ + K G M DA ++ M + +VV++ T+I GL GD A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 198 LFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYS 257
L MW T+ ++V G I+ ++ G+ D+ L+D Y
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 258 KCGSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHF 313
K G ++ AQ +M K T V +N ++ G+ LHG E+ + M G +
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 314 TI-SIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
T S+V + C+R +L+ A + + G G D LV + K M++A +F
Sbjct: 598 TFNSLVKQYCIR-NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 373 MHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSG 427
M K +V +++ LI G+ + +A ++F+QM RE + + F S Y G
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF-DFFSDTKYKG 714
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 171/406 (42%), Gaps = 17/406 (4%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVK-CGLMLDARKLFGD 170
+D V V +R ++VF M++ G + N L K C A +F +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 171 MPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL 226
PE +V S+ VI + G EA L L M ++ +++T+V G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNS 282
+ ++ + G+ +S++ ++I + + + +A+ AF +M + TV + +
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 283 IIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
+I G+ G A + EM D T + +I ++ + A + + G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAI 398
D V T L++ Y K G M+DA V + M + NV+++ LI G G + A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 399 QMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIEL 458
++ +M + + PN T+ ++++ SG E ++ + + Y +++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA-AGLNADTVTYTTLMDA 535
Query: 459 LGREGLLDEAFALIRR---APFEPTKNMWVALLTACRMHGNLELGK 501
+ G +D+A +++ +PT + L+ +HG LE G+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 16/342 (4%)
Query: 88 RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYM 147
R +EA L ++EL+G DV +Y +VN + V K+ M G +P+ Y+
Sbjct: 261 RIKEAHHLLLLMELKGYTPDV--ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 148 MNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMW 203
++ + + + +A + F +M + D V + T+I G GD A F M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 204 VEFNDGRSRTFATMVRASAGLG-LIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSI 262
T+ ++ +G +++ G+ H K G+ DS LI+ Y K G +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHM 437
Query: 263 EDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIV 318
+DA + M + V + ++I G G + A + EM G + + FT + +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 319 IRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK-- 376
+ + ++E A + G +D V T L+D Y K G M+ A+ + M K
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 377 --NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTF 416
++++N L+ G+ HG E ++ ML + + PN TF
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 138/293 (47%), Gaps = 19/293 (6%)
Query: 277 TVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHA 336
+ +++++ GY G ++ + M+ G K + + +I + R+ L A++A +
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 337 ALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHG 392
++R G D V T L+D + K G + A F MH + +V+++ A+I+G+ G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 393 QGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 452
+A ++F +M + + P+ VTF +++ +G + + + M + P + Y
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTY 459
Query: 453 ACMIELLGREGLLDEAFALIR---RAPFEPTKNMWVALLTACRMHGNLE-----LGKFAA 504
+I+ L +EG LD A L+ + +P + +++ GN+E +G+F A
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 505 EKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCTWIEV 557
L Y L++ Y SG++ +A +L+ + KGL+ PT V
Sbjct: 520 AGL----NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ--PTIVTFNV 566
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 154/359 (42%), Gaps = 19/359 (5%)
Query: 84 GLCNRH--REAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGF 141
G C R R A + F + DV TY A+++ + + K+F+ M G
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDV--LTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFG 197
EPD ++ + K G M DA ++ M + +VV++ T+I GL GD A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 198 LFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYS 257
L MW T+ ++V G I+ ++ G+ D+ L+D Y
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 258 KCGSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHF 313
K G ++ AQ +M K T V +N ++ G+ LHG E+ + M G +
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 314 TI-SIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
T S+V + C+R +L+ A + + G G D LV + K M++A +F
Sbjct: 598 TFNSLVKQYCIR-NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 373 MHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSG 427
M K +V +++ LI G+ + +A ++F+QM RE + + F S Y G
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF-DFFSDTKYKG 714
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 171/406 (42%), Gaps = 17/406 (4%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVK-CGLMLDARKLFGD 170
+D V V +R ++VF M++ G + N L K C A +F +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 171 MPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL 226
PE +V S+ VI + G EA L L M ++ +++T+V G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNS 282
+ ++ + G+ +S++ ++I + + + +A+ AF +M + TV + +
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 283 IIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
+I G+ G A + EM D T + +I ++ + A + + G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAI 398
D V T L++ Y K G M+DA V + M + NV+++ LI G G + A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 399 QMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIEL 458
++ +M + + PN T+ ++++ SG E ++ + + Y +++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA-AGLNADTVTYTTLMDA 535
Query: 459 LGREGLLDEAFALIRR---APFEPTKNMWVALLTACRMHGNLELGK 501
+ G +D+A +++ +PT + L+ +HG LE G+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 220/504 (43%), Gaps = 35/504 (6%)
Query: 71 PSTPGLCSQIEKLGLCNRHR--EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRG 128
P+ C+ I G C R A +LF+++E G D+ A Y L++ +
Sbjct: 284 PNVVTFCTLIN--GFCKRGEMDRAFDLFKVMEQRGIEPDLIA--YSTLIDGYFKAGMLGM 339
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM----PERDVVSWMTVIG 184
K+F+ + G + D+ + + + ++VK G + A ++ M +VV++ +I
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 185 GLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGG 244
GL G EAFG++ + + T+++++ G ++ G ++ +KMG
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 245 DSFVACALIDMYSKCGSIEDAQ----CAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIY 300
D + L+D SK G + A Q V +NS+I G+ +EAL ++
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 301 LEMRDSGAKIDHFTISIVIRICV-RLASLEHAK-----QAHAALVRHGFGSDIVANTALV 354
M G K D T + V+R+ + A +H K Q + R+ +DI ++
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 579
Query: 355 DFYSKWGRMEDARHVFDRM----HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI 410
K R+EDA F+ + +++++N +I GY + + ++A ++FE +
Sbjct: 580 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 639
Query: 411 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 470
PN VT ++ + + +F M+ + KP A+ Y C+++ + ++ +F
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EKGSKPNAVTYGCLMDWFSKSVDIEGSFK 698
Query: 471 L---IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKL----CNYVMLLN 523
L ++ P+ + ++ G ++ A ++ KL Y +L+
Sbjct: 699 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE---ATNIFHQAIDAKLLPDVVAYAILIR 755
Query: 524 IYNSSGKLKEAAGVLQTLKRKGLR 547
Y G+L EAA + + + R G++
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNGVK 779
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 168/387 (43%), Gaps = 29/387 (7%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGAS----TYDALVNVCVGLRSIRGVKKVFNYMISS 139
GLC R ++E + G G TY +L++ ++R ++ MI
Sbjct: 400 GLCQDGR----IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDAR----KLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
G+ PD+ + ++ K GLML A K+ G +VV + ++I G + EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 196 FGLFLFMWVEFNDGRSRTFATMVRASAGLGLI------QVGRQIHSCALKMGVGGDSFVA 249
+F M + TF T++R S +G Q+ + + D V
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 250 CALIDMYSKCGSIEDAQCAFDQMP----EKTTVGWNSIIAGYALHGYSEEALSIYLEMRD 305
+I + KC IEDA F+ + E V +N++I GY +EA I+ ++
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635
Query: 306 SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMED 365
+ + T++I+I + + ++ A + + + G + V L+D++SK +E
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695
Query: 366 ARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS 421
+ +F+ M K +++S++ +I G G+ ++A +F Q + +++P+ V + ++
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755
Query: 422 A-CSYSGLSERGWEIFYSMSRDHKVKP 447
C L E + Y + VKP
Sbjct: 756 GYCKVGRLVEAA--LLYEHMLRNGVKP 780
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/431 (19%), Positives = 172/431 (39%), Gaps = 60/431 (13%)
Query: 172 PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGR 231
P +VV++ T+I G G+ AF LF M + ++T++ G++ +G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM------------------- 272
++ S AL GV D V + ID+Y K G + A + +M
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 273 --------------------PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDH 312
E + V ++S+I G+ G ++Y +M G D
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 313 FTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDR 372
+++ + + HA + ++ ++V +L+D + + R ++A VF
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 373 MH----RKNVISWNALIA------GYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
M + +V ++ ++ + H + +Q+F+ M R ++ + V+
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 423 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRRAPFEP 479
E + F ++ + K++P + Y MI LDEA F L++ PF P
Sbjct: 582 LFKCHRIEDASKFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640
Query: 480 -TKNMWVALLTACR---MHGNLELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAA 535
T + + + C+ M G + + AEK + + Y L++ ++ S ++ +
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA---VTYGCLMDWFSKSVDIEGSF 697
Query: 536 GVLQTLKRKGL 546
+ + ++ KG+
Sbjct: 698 KLFEEMQEKGI 708
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 5/205 (2%)
Query: 268 AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLAS 327
D P V + ++I G+ G + A ++ M G + D S +I +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 328 LEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH----RKNVISWNA 383
L + + + G D+V ++ +D Y K G + A V+ RM NV+++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
LI G G+ +A M+ Q+L+ + P+ VT+ +++ G G+ ++ M +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-M 455
Query: 444 KVKPRAMHYACMIELLGREGLLDEA 468
P + Y +++ L ++GL+ A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHA 480
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/469 (21%), Positives = 198/469 (42%), Gaps = 27/469 (5%)
Query: 100 ELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCG 159
E+ + T + +VN + V + + G PD+ N ++ + G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 160 LMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFA 215
LM +A +L MP + V ++ TVI GL G Y A +F M S T+
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 216 TMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK 275
+++ + G + ++ S V D +++ ++++ G+++ A F+ + E
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 276 TTVGWNSI----IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA 331
+ N I I GY G A+++ EM G +D T + ++ + L A
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 332 KQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAG 387
+ + D T L+D + K G +++A +F +M K +V+++N L+ G
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 388 YGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA-CSYSGLSE--RGWEIFYSMSRDHK 444
+G G + A +++ M+ + ++P +++ +++A CS L+E R W+ S
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS----KN 580
Query: 445 VKPRAMHYACMIELLGREGLLDEAFALIRR---APFEPTKNMWVALLTACRMHGNLELGK 501
+KP M MI+ R G + + + + F P + L+ N+
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS-KA 639
Query: 502 FAAEKLYEMDPGKLC----NYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
F K E + G L Y +L+ + ++KEA VL+ + +G+
Sbjct: 640 FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/469 (20%), Positives = 193/469 (41%), Gaps = 49/469 (10%)
Query: 94 ELFEILE-LEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVL 152
E FE++ + G G TY+ ++N K+VF M+ SG PD +L
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 153 LMHVKCGLMLDARKLFGDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSR 212
+ K G +++ K+F DM RDVV +
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVC------------------------------ 377
Query: 213 TFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM 272
F++M+ G + + + G+ D+ + LI Y + G I A ++M
Sbjct: 378 -FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 273 PEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASL 328
++ V +N+I+ G EA ++ EM + D +T++I+I +L +L
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 329 EHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV----ISWNAL 384
++A + + D+V L+D + K G ++ A+ ++ M K + IS++ L
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 385 IAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 444
+ + G +A +++++M+ + + P + +++ SG + G M +
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 445 VKPRAMHYACMIELLGREGLLDEAFALIRRAPFE-----PTKNMWVALLTACRMHGNLEL 499
V P + Y +I RE + +AF L+++ E P + ++L ++
Sbjct: 617 V-PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 500 GKFAAEKLYE--MDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
+ K+ E ++P + Y ++N + S L EA + + ++G
Sbjct: 676 AEVVLRKMIERGVNPDR-STYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 177/435 (40%), Gaps = 48/435 (11%)
Query: 156 VKCGLMLDARKLFGDMPERDVVSWMTVIGGL----VDSGDYSEAFGLFLFMWVE------ 205
V+ G + DA+ M R VS + ++ L + G F L + +V+
Sbjct: 124 VRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLRE 183
Query: 206 ----FNDGRSRTFATMVRASAGL-------GLIQVGRQIHSCALKMGVGGDSFVACALID 254
F RS+ F + A L G +++ ++ + GVG + + +++
Sbjct: 184 AHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVN 243
Query: 255 MYSKCGSIEDAQCAFDQMPEKTT----VGWNSIIAGYALHGYSEEALSIYLEMRDSGAKI 310
K G +E Q+ EK V +N++I+ Y+ G EEA + M G
Sbjct: 244 ALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSP 303
Query: 311 DHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVF 370
+T + VI + E AK+ A ++R G D +L+ K G + + VF
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 371 DRMHRKNVIS----WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYS 426
M ++V+ ++++++ + G ++A+ F + +IP++V + ++
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 427 GLSERGWEIFYSM-----SRDHKVKPRAMHYACMIELLGR-EGLLDEAFALIRRAPFEPT 480
G+ + M + D +H C ++LG + L +E + RA F +
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE---MTERALFPDS 480
Query: 481 KNMWVALLTACRMHGNL----ELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAG 536
+ + + C++ GNL EL + EK +D + Y LL+ + G + A
Sbjct: 481 YTLTILIDGHCKL-GNLQNAMELFQKMKEKRIRLD---VVTYNTLLDGFGKVGDIDTAKE 536
Query: 537 VLQTLKRKGLRMLPT 551
+ + K +LPT
Sbjct: 537 IWADMVSK--EILPT 549
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/522 (22%), Positives = 223/522 (42%), Gaps = 60/522 (11%)
Query: 76 LCSQIEKLGLCNRHREA-MELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFN 134
L + + + GL + ++ ME+ E + C ++ TY+ +VN L ++ + +
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLE----DKVCPNI--YTYNKMVNGYCKLGNVEEANQYVS 242
Query: 135 YMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP----ERDVVSWMTVIGGLVDSG 190
++ +G +PD + +++ + + + A K+F +MP R+ V++ +I GL +
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 191 DYSEAFGLFLFMWVEFNDGRSRTFATMV-------RASAGLGLIQ------VGRQIHS-- 235
EA LF+ M + RT+ ++ R S L L++ + IH+
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 236 ------CA--------------LKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK 275
C+ L+ G+ + ALI+ Y K G IEDA + M +
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 276 ----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA 331
T +N +I GY +A+ + +M + D T + +I R + + A
Sbjct: 423 KLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 332 KQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAG 387
+ + + G D T+++D K R+E+A +FD + +K NV+ + ALI G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 388 YGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 447
Y G+ ++A M E+ML + +PN +TF A++ G + + M + ++P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK-IGLQP 600
Query: 448 RAMHYACMIELLGREGLLDEAFALIRR---APFEPTKNMWVALL-TACRMHGNLELGKFA 503
+I L ++G D A++ ++ + +P + + + T CR L+
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
A+ L Y L+ Y G+ A VL+ ++ G
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 204/493 (41%), Gaps = 40/493 (8%)
Query: 33 FPRIRCSSSMEQGLRPKPKKTEYVDRKMPVLDDAQIMKPSTPGLCSQIEKLGLCNRHREA 92
FP +R + + + L +K+E ++ + + +KP+ I+ L + +A
Sbjct: 320 FPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG--IKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 93 MELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVL 152
EL + +G +V TY+AL+N I V M S P+ N ++
Sbjct: 378 RELLGQMLEKGLMPNV--ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 153 LMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFND 208
+ K + A + M ER DVV++ ++I G SG++ A+ L M
Sbjct: 436 KGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 209 GRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCA 268
T+ +M+ + ++ + + GV + + ALID Y K G +++A
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 269 FDQMPEKT----TVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
++M K ++ +N++I G G +EA + +M G + T +I+I ++
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV----IS 380
+HA ++ G D T + Y + GR+ DA + +M V +
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS----------------ACS 424
+++LI GYG+ GQ A + ++M P+ TFL+++ C+
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCA 734
Query: 425 YSGLSERGW--EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI----RRAPFE 478
S + E E+ M +H V P A Y +I + G L A + R
Sbjct: 735 MSNMMEFDTVVELLEKMV-EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 479 PTKNMWVALLTAC 491
P++ ++ ALL+ C
Sbjct: 794 PSELVFNALLSCC 806
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 194/454 (42%), Gaps = 49/454 (10%)
Query: 113 YDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
Y+ L+N + +K+V+ M+ P++Y N+++ + K G + +A + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 173 ER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQ 228
E D ++ ++I G D AF +F M ++ G R GL
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK---GCRRNEVAYTHLIHGLC--- 299
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYA 288
V R+I +D++ K ++D +C T + +I
Sbjct: 300 VARRIDEA----------------MDLFVK---MKDDECF------PTVRTYTVLIKSLC 334
Query: 289 LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIV 348
EAL++ EM ++G K + T +++I E A++ ++ G +++
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 349 ANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQM 404
AL++ Y K G +EDA V + M + N ++N LI GY +A+ + +M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKM 453
Query: 405 LRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGL 464
L +V+P+ VT+ +++ SG + + + S+ D + P Y MI+ L +
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 465 LDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMD--PGKLCNYV 519
++EA F + + P M+ AL+ G ++ EK+ + P L +
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL-TFN 571
Query: 520 MLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCT 553
L++ + GKLKEA + + + + GL+ PT +
Sbjct: 572 ALIHGLCADGKLKEATLLEEKMVKIGLQ--PTVS 603
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 108/281 (38%), Gaps = 22/281 (7%)
Query: 133 FNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVD 188
F M+SSG +PD + + + + G +LDA + M E D+ ++ ++I G D
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 189 SGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFV 248
G + AF + M + TF ++++ L ++ G+Q G
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH---LLEMKYGKQ----------KGSEPE 731
Query: 249 ACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM-RDSG 307
CA+ +M +E + + + +I G G A ++ M R+ G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 308 AKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDAR 367
+ ++ C +L A + ++ G + + L+ K G E
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 368 HVFDRM----HRKNVISWNALIAGYGNHGQGEQAIQMFEQM 404
VF + + ++ ++W +I G G G E ++F M
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 215/473 (45%), Gaps = 22/473 (4%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA+++FE E++ D A STY+ L+++ + ++ + M +G P++ +N
Sbjct: 361 EALKVFE--EMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 151 VLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
++ K + +A +F +M + D +++ ++I GL G +A+ ++ M
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
S + ++++ G + G +I+ + D + +D K G E +
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 267 CAFDQMPEKTTV----GWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC 322
F+++ + V ++ +I G G++ E ++ M++ G +D +IVI
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 323 VRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NV 378
+ + A Q + GF +V +++D +K R+++A +F+ K NV
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 379 ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 438
+ +++LI G+G G+ ++A + E+++++ + PN T+ ++L A + F S
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 439 MSRDHKVKPRAMHYACMIELLGREGLLDEAFAL---IRRAPFEPTKNMWVALLTACRMHG 495
M ++ K P + Y +I L + ++AF +++ +P+ + +++ G
Sbjct: 718 M-KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAG 776
Query: 496 NL-ELGK-FAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
N+ E G F K P C M+ + N + + +A + + +R+GL
Sbjct: 777 NIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN-RAMDAFSLFEETRRRGL 828
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 172/437 (39%), Gaps = 56/437 (12%)
Query: 33 FPRIRCSSSMEQGLRPKPKKTEYVDRKMPVLD--DAQIMKPSTPGLCSQIEKLGLCNRHR 90
FP +R + M L K++ +D + + D ++ P CS I+ LG R
Sbjct: 409 FPNVRTVNIMVDRL----CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A +++E + L+ DC + Y +L+ K++ MI+ PDL ++N
Sbjct: 465 DAYKVYEKM-LDSDCR-TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 151 VLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVE- 205
+ K G R +F ++ R D S+ +I GL+ +G +E + LF M +
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 206 -------FN---DGRSR------------------------TFATMVRASAGLGLIQVGR 231
+N DG + T+ +++ A + +
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 232 QIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSIIAGY 287
+ A + + + +LID + K G I++A +++ +K WNS++
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDI 347
EAL + M++ + T I+I ++ A + + G
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVIS----WNALIAGYGNHGQGEQAIQMFEQ 403
++ T ++ +K G + +A +FDR + +NA+I G N + A +FE+
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Query: 404 MLRERVIPNHVTFLAVL 420
R R +P H VL
Sbjct: 823 T-RRRGLPIHNKTCVVL 838
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 269 FDQMPE----KTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
F QM E T + ++I G+A G + ALS+ EM+ S D ++ I +
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVI----S 380
+ ++ A + + +G D V T+++ K R+++A +F+ + + + +
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 440
+N +I GYG+ G+ ++A + E+ + IP+ + + +L+ G + ++F M
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 441 RDHKVKPRAMHYACMIELLGREGLLDEAFAL 471
+D P Y +I++L R G LD AF L
Sbjct: 371 KD--AAPNLSTYNILIDMLCRAGKLDTAFEL 399
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 112/585 (19%), Positives = 236/585 (40%), Gaps = 64/585 (10%)
Query: 111 STYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
S Y L+ + + +F M G+EP +++ ++ K G + A L +
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 171 MP----ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL 226
M + D+V + I G A+ F + T+ +M+ L
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV-----L 283
Query: 227 IQVGRQIHSCALKMGVGGDSFVAC-----ALIDMYSKCGSIEDAQCAFDQMPEK----TT 277
+ R + + + + V C +I Y G ++A ++ K +
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 278 VGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAA 337
+ +N I+ G +EAL ++ EM+ A + T +I+I + R L+ A + +
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 338 LVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQ 393
+ + G ++ +VD K ++++A +F+ M K + I++ +LI G G G+
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 394 GEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYA 453
+ A +++E+ML N + + +++ G E G +I+ M + P
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI-NQNCSPDLQLLN 521
Query: 454 CMIELLGREGLLDEAFAL---IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEK---L 507
++ + + G ++ A+ I+ F P + L+ HG ++ G FA E
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI-----HGLIKAG-FANETYELF 575
Query: 508 YEM-DPGKLCN---YVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCT--------WI 555
Y M + G + + Y ++++ + GK+ +A +L+ +K KG PT
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE--PTVVTYGSVIDGLA 633
Query: 556 EVKKQPHAFLCGDKSHTQTKEIYQKV-DEILDEISRHGYIKENEMLLPDVDEEEQRLQQY 614
++ + A++ +++ ++ E+ + ++D + G I E ++L ++ ++ Y
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693
Query: 615 HSEKL-------------AIAFGLINTPDWTPLQITQGHRVCGDC 646
L + F + TP Q+T G + G C
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 199/458 (43%), Gaps = 28/458 (6%)
Query: 36 IRCSSSMEQG-LRPKPKKTEYVDRKM-PVLDDAQIMKPSTP--------GLCSQIEKLGL 85
+R SSS+ G LR + KT D K+ +D M S P L S I KL
Sbjct: 41 VRASSSVSGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKL-- 98
Query: 86 CNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDL 145
++ + L + +E+ G D+ T++ ++N + + M+ G+EPD
Sbjct: 99 -KKYDVVISLGKKMEVLGIRNDL--YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDR 155
Query: 146 YMMNRVLLMHVKCGLMLDARKLFGDMPE----RDVVSWMTVIGGLVDSGDYSEAFGLFLF 201
+ ++ + + DA L M E D+V++ +I L + ++AF F
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 202 MWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGS 261
+ + T+ +V ++ S +K + + AL+D + K G
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 262 IEDAQCAFDQMP----EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISI 317
+ +A+ F++M + V ++S+I G LH +EA ++ M G D + +
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH--- 374
+I + +E + + + G S+ V L+ + + G ++ A+ F +M
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 375 -RKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 433
++ ++N L+ G ++G+ E+A+ +FE M + + + VT+ V+ +G E W
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 434 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 471
+F S+S +KP + Y M+ L +GLL E AL
Sbjct: 456 SLFCSLSL-KGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 174/402 (43%), Gaps = 19/402 (4%)
Query: 163 DARKLFGDM----PERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMV 218
DA LF DM P +V + ++ +V Y L M V TF ++
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 219 RASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPE---- 274
+ + I LK+G D +L++ + + + DA D+M E
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 275 KTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQA 334
V +N+II +A + E+ G + + T + ++ + A +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 335 HAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHR----KNVISWNALIAGYGN 390
+ +++ +++ +AL+D + K G++ +A+ +F+ M R +++++++LI G
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 391 HGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 450
H + ++A QMF+ M+ + + + V++ +++ + E G ++F MS+ V +
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV-SNTV 366
Query: 451 HYACMIELLGREGLLDEAFALIRRAPF---EPTKNMWVALLTACRMHGNLE--LGKFAAE 505
Y +I+ + G +D+A + F P + LL +G LE L F
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 506 KLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
+ EMD + Y ++ +GK++EA + +L KGL+
Sbjct: 427 QKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLK 467
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 153/347 (44%), Gaps = 12/347 (3%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T +LVN + + + M+ G++PD+ N ++ K + DA F ++
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 172 PER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
+ +VV++ ++ GL +S +S+A L M + T++ ++ A G +
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSI 283
+++ ++M + D +LI+ I++A FD M K V +N++
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I G+ E+ + ++ EM G + T + +I+ + ++ A++ + + G
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQ 399
DI L+ G +E A +F+ M ++ +++++ +I G G+ E+A
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 446
+F + + + P+ VT+ ++S GL ++ M ++ +K
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 153/346 (44%), Gaps = 18/346 (5%)
Query: 70 KPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV 129
KP + I+ L R +A + F+ +E +G +V TY ALVN
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNV--VTYTALVNGLCNSSRWSDA 244
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP----ERDVVSWMTVIGG 185
++ + MI P++ + +L VK G +L+A++LF +M + D+V++ ++I G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD 245
L EA +F M + ++ T++ ++ G ++ + G+ +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 246 SFVACALIDMYSKCGSIEDAQCAFDQM------PEKTTVGWNSIIAGYALHGYSEEALSI 299
+ LI + + G ++ AQ F QM P+ T +N ++ G +G E+AL I
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT--YNILLGGLCDNGELEKALVI 422
Query: 300 YLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSK 359
+ +M+ +D T + VIR + +E A +L G DIV T ++
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 360 WGRMEDARHVFDRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQML 405
G + + ++ +M ++ ++ + ++ G + ++ ++ML
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLS----DGDITLSAELIKKML 524
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 192/437 (43%), Gaps = 34/437 (7%)
Query: 71 PSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVK 130
PS + + NR+ + LFE +++ G + +V CV L S
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN---IVMHCVCLSSQPCRA 137
Query: 131 KVF-NYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP----ERDVVSWMTVIGG 185
F M+ GFEPDL +L + + DA LF + + +VV++ T+I
Sbjct: 138 SCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC 197
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCAL-----KM 240
L + + A LF M + T+ +V GL ++GR + L K
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT-----GLCEIGRWGDAAWLLRDMMKR 252
Query: 241 GVGGDSFVACALIDMYSKCGSIEDAQCAFDQM------PEKTTVGWNSIIAGYALHGYSE 294
+ + ALID + K G + +A+ ++ M P+ T G S+I G ++G +
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG--SLINGLCMYGLLD 310
Query: 295 EALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALV 354
EA ++ M +G + + +I + +E + + + G ++ + T L+
Sbjct: 311 EARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLI 370
Query: 355 DFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVI 410
Y GR + A+ VF++M + ++ ++N L+ G +G+ E+A+ +FE M + +
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Query: 411 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 470
N VT+ ++ G E +++F S+ +KP + Y MI R GL+ EA +
Sbjct: 431 INIVTYTIIIQGMCKLGKVEDAFDLFCSLF-SKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 471 LIRRAP---FEPTKNMW 484
L ++ F P ++++
Sbjct: 490 LFKKMKEDGFLPNESVY 506
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 49/273 (17%)
Query: 263 EDAQCAFDQM----PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIV 318
DA F +M P + + + +++ A + +S++ +M+ G T +IV
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 319 IRICVRLASLE-HAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM---- 373
+ CV L+S A +++ GF D+V T+L++ Y W R+EDA +FD++
Sbjct: 125 MH-CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 374 -----------------------------------HRKNVISWNALIAGYGNHGQGEQAI 398
R NV+++NAL+ G G+ A
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 399 QMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIEL 458
+ M++ R+ PN +TF A++ A G E+ Y++ V P Y +I
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL-YNVMIQMSVYPDVFTYGSLING 302
Query: 459 LGREGLLDEA---FALIRRAPFEPTKNMWVALL 488
L GLLDEA F L+ R P + ++ L+
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 171/414 (41%), Gaps = 32/414 (7%)
Query: 83 LGLCNRHRE---AMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMI-- 137
+G C R+ + A+ L + +G +D VN + ++S+ K+ + M+
Sbjct: 204 IGACARNNDIEKALNLIAKMRQDGYQSD--------FVNYSLVIQSLTRSNKIDSVMLLR 255
Query: 138 ------SSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP----ERDVVSWMTVIGGLV 187
E D+ ++N +++ K G A +L G + +++I L
Sbjct: 256 LYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALA 315
Query: 188 DSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSF 247
DSG EA LF + R+R + +++ G ++ + S K GV D
Sbjct: 316 DSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEH 375
Query: 248 VACALIDMYSKCGSIEDAQCAFDQMP----EKTTVGWNSIIAGYALHGYSEEALSIYLEM 303
LID Y G E A+ +M + + ++ ++AG+ G ++ + EM
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 304 RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRM 363
+ G K D ++VI + L+HA ++ G D V L+D + K GR
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRH 495
Query: 364 EDARHVFDRMHRKNVI----SWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAV 419
A +F+ M R+ + ++N +I YG+ + + ++ +M + ++PN VT +
Sbjct: 496 IVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 555
Query: 420 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 473
+ SG E M + +KP + Y +I + GL ++A R
Sbjct: 556 VDVYGKSGRFNDAIECLEEM-KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 159/382 (41%), Gaps = 23/382 (6%)
Query: 99 LELEGDCADVGASTYDA-LVNVCVGL----RSIRGVKKVFNYMISSGFEPDLYMMNRVLL 153
L+L G G S A LV++ L R++ + +F + SG +P N +L
Sbjct: 289 LQLLGMAQATGLSAKTATLVSIISALADSGRTLEA-EALFEELRQSGIKPRTRAYNALLK 347
Query: 154 MHVKCGLMLDARKLFGDMPERDVV----SWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDG 209
+VK G + DA + +M +R V ++ +I V++G + A + M
Sbjct: 348 GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 210 RSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAF 269
S F+ ++ G Q Q+ +GV D +ID + K ++ A F
Sbjct: 408 NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF 467
Query: 270 DQM----PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRL 325
D+M E V WN++I + HG A ++ M G T +I+I
Sbjct: 468 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQ 527
Query: 326 ASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH----RKNVISW 381
+ K+ + G ++V +T LVD Y K GR DA + M + + +
Sbjct: 528 ERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMY 587
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS- 440
NALI Y G EQA+ F M + + P + LA+ S + G R E F +
Sbjct: 588 NALINAYAQRGLSEQAVNAFRVMTSDGLKP---SLLALNSLINAFGEDRRDAEAFAVLQY 644
Query: 441 -RDHKVKPRAMHYACMIELLGR 461
+++ VKP + Y +++ L R
Sbjct: 645 MKENGVKPDVVTYTTLMKALIR 666
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 127/287 (44%), Gaps = 25/287 (8%)
Query: 282 SIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH 341
SII+ A G + EA +++ E+R SG K + +++ V+ L+ A+ + + +
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 342 GFGSDIVANTALVDFYSKWGRMEDARHVFDRMH----RKNVISWNALIAGYGNHGQGEQA 397
G D + L+D Y GR E AR V M + N ++ L+AG+ + G+ ++
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 398 IQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIE 457
Q+ ++M V P+ + V+ + F M + ++P + + +I+
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG-IEPDRVTWNTLID 487
Query: 458 LL---GREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLE--------LGKFAAEK 506
GR + +E F + R P + ++ + +G+ E LGK ++
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS---YGDQERWDDMKRLLGKMKSQG 544
Query: 507 LYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCT 553
+ + + L+++Y SG+ +A L+ +K GL+ P+ T
Sbjct: 545 ILP----NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK--PSST 585
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 100/249 (40%), Gaps = 8/249 (3%)
Query: 113 YDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP 172
Y+ +++ + F+ M+S G EPD N ++ H K G + A ++F M
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 173 ERDVVSWMTVIGGLVDS-GDYSEAFGLFLFMWVEFNDG---RSRTFATMVRASAGLGLIQ 228
R + T +++S GD + + + G T T+V G
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 229 VGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP----EKTTVGWNSII 284
+ +G+ S + ALI+ Y++ G E A AF M + + + NS+I
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 285 AGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFG 344
+ EA ++ M+++G K D T + +++ +R+ + + ++ G
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 345 SDIVANTAL 353
D A + L
Sbjct: 687 PDRKARSML 695
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 163/375 (43%), Gaps = 19/375 (5%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY+ L+N V + ++VF M S +PD+ N ++ + K G A + DM
Sbjct: 224 TYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM 283
Query: 172 PER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
R D +++MT+I D+ L+ M + F+ ++ G +
Sbjct: 284 ETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKL 343
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSI 283
G + ++ G + + LID Y+K GS+EDA +M ++ V ++ +
Sbjct: 344 NEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVV 403
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
+ G +G EEAL + R G I+ S +I + ++ A++ + G
Sbjct: 404 VNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC 463
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHR-----KNVISWNALIAGYGNHGQGEQAI 398
D AL+D ++K ++++A +F RM + V ++ L++G + E+A+
Sbjct: 464 TRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEAL 523
Query: 399 QMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYAC--MI 456
++++ M+ + + P F A+ + SG R +I ++ + + AC MI
Sbjct: 524 KLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI----LDAACEDMI 579
Query: 457 ELLGREGLLDEAFAL 471
L + G + EA L
Sbjct: 580 NTLCKAGRIKEACKL 594
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 93/458 (20%), Positives = 183/458 (39%), Gaps = 57/458 (12%)
Query: 111 STYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGD 170
S +AL+ L + + V+ M +G EP LY N ++ V + A ++F
Sbjct: 188 SAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEV 247
Query: 171 MP----ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGL 226
M + D+V++ T+I G +G +A M ++ T+ TM++A
Sbjct: 248 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC----- 302
Query: 227 IQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTV----GWNS 282
F +C + + +M EK ++
Sbjct: 303 ---------------YADSDFGSCVAL---------------YQEMDEKGIQVPPHAFSL 332
Query: 283 IIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHG 342
+I G G E +++ M G+K + +++I + S+E A + ++ G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 343 FGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAI 398
F D+V + +V+ K GR+E+A F N + +++LI G G G+ ++A
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 399 QMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIEL 458
++FE+M + + + A++ A + + +F M + Y ++
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 459 LGREGLLDEAFAL---IRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDP-GK 514
+ +E +EA L + PT + AL T + G + A + L E+ P G
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVAR---ACKILDELAPMGV 569
Query: 515 LCNYVM--LLNIYNSSGKLKEAAGVLQTLKRKGLRMLP 550
+ + ++N +G++KEA + + +G R +P
Sbjct: 570 ILDAACEDMINTLCKAGRIKEACKLADGITERG-REVP 606
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 135/322 (41%), Gaps = 28/322 (8%)
Query: 251 ALIDMYSKCGSIEDAQCAFDQMP----EKTTVGWNSII-AGYALHGYSEEALSIYLEMRD 305
+I Y K G + A M E + + ++I A YA + +++Y EM +
Sbjct: 262 TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS-CVALYQEMDE 320
Query: 306 SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMED 365
G ++ S+VI + L ++R G ++ T L+D Y+K G +ED
Sbjct: 321 KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVED 380
Query: 366 ARHVFDRM----HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS 421
A + RM + +V++++ ++ G +G+ E+A+ F + + N + + +++
Sbjct: 381 AIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLID 440
Query: 422 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEP-- 479
+G + +F MS + + Y +I+ + +DEA AL +R E
Sbjct: 441 GLGKAGRVDEAERLFEEMSEKGCTRD-SYCYNALIDAFTKHRKVDEAIALFKRMEEEEGC 499
Query: 480 --TKNMWVALLTAC-RMHGNLELGKFAAEKLYEM------DPGKLCNYVMLLNIYNSSGK 530
T + LL+ + H N E A KL++M P C + L SGK
Sbjct: 500 DQTVYTYTILLSGMFKEHRNEE-----ALKLWDMMIDKGITPTAAC-FRALSTGLCLSGK 553
Query: 531 LKEAAGVLQTLKRKGLRMLPTC 552
+ A +L L G+ + C
Sbjct: 554 VARACKILDELAPMGVILDAAC 575
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 148/339 (43%), Gaps = 20/339 (5%)
Query: 214 FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM- 272
F ++ A LG ++ S KMG + AL++ Y + G +A+ F +M
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 273 ---PEKTTVGWNSIIAGYA---LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA 326
PE + + + I+ + +EE L+ + S K D ++I + +
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 327 SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKN----VISWN 382
+ E A++ +++V G V +L+ F + + ++ ++D+M R + V+S+
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVSYA 318
Query: 383 ALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 442
LI YG + E+A+ +FE+ML V P H + +L A + SG+ E+ +F SM RD
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 443 HKVKPRAMHYACMIELLGREGLLDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLEL 499
++ P Y M+ ++ A F I+ FEP + L+ ++E
Sbjct: 379 -RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 437
Query: 500 GKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVL 538
EK+ G N +L I ++SG+ K L
Sbjct: 438 MMEVYEKMRL--SGIKANQTILTTIMDASGRCKNFGSAL 474
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 197/458 (43%), Gaps = 19/458 (4%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
T AL++ V R ++FN M+S G PD+Y+ V+ + + A+++ M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 172 P----ERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
+ ++V + +I GL EA G+ + + T+ T+V +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDA----QCAFDQMPEKTTVGWNSI 283
++G ++ L + +L++ K G IE+A + D +N++
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I EA ++ M G + + T SI+I + R L+ A +V G
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQ 399
+ +L++ + K+G + A M K V+++ +L+ GY + G+ +A++
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 459
++ +M + + P+ TF +LS +GL ++F M+ + VKP + Y MIE
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGY 552
Query: 460 GREGLLDEAFALIRRAP---FEPTKNMWVALLTACRMHGNLELGKFAAEKLYE--MDPGK 514
EG + +AF ++ P + L+ + G K + L++ + +
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 515 LCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTC 552
+C Y LL+ + GKL+EA V Q + ++G+ + C
Sbjct: 613 IC-YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 153/381 (40%), Gaps = 60/381 (15%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY +L+ I ++++ M G P +Y +L + GL+ DA KLF +M
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 172 PERDV----VSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
E +V V++ +I G + GD S+AF M
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT------------------------ 569
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP----EKTTVGWNSI 283
+ G+ D++ LI G +A+ D + E + + +
Sbjct: 570 -----------EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA-KQAHAALVRH- 341
+ G+ G EEALS+ EM G +D ++I SL+H ++ L++
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID-----GSLKHKDRKLFFGLLKEM 673
Query: 342 ---GFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQG 394
G D V T+++D SK G ++A ++D M + N +++ A+I G G
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 395 EQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLS-ERGWEIFYSMSRDHKVKPRAMHYA 453
+A + +M +PN VT+ L + + ++ E+ ++ + + Y
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG--LLANTATYN 791
Query: 454 CMIELLGREGLLDEAFALIRR 474
+I R+G ++EA LI R
Sbjct: 792 MLIRGFCRQGRIEEASELITR 812
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 121/278 (43%), Gaps = 16/278 (5%)
Query: 153 LMHVKC--GLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
L+H C G + +A + +M +R D+V + +I G + D FGL M
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
+ +M+ A + G + I + G + A+I+ K G + +A+
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 267 CAFDQMPEKTTVGWNSIIAGYALHGYS--EEALSIYLEMRDS---GAKIDHFTISIVIRI 321
+M ++V N + G L + E + +E+ ++ G + T +++IR
Sbjct: 738 VLCSKMQPVSSVP-NQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 322 CVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV--- 378
R +E A + ++ G D + T +++ + ++ A +++ M K +
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 379 -ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVT 415
+++N LI G G+ +A ++ +MLR+ +IPN+ T
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 167/365 (45%), Gaps = 25/365 (6%)
Query: 86 CNRHREAMELFEILE---LEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFE 142
C ++ +A +E++E EG C V A + + + + I KV+ M S G+
Sbjct: 158 CTQNGDAQGAYEVIEQTRAEGFCVSVHA--LNNFMGCLLNVNEIDRFWKVYKEMDSLGYV 215
Query: 143 PDLYMMNRVLLMHVKCGLMLDARKLFGDMPE----RDVVSWMTVIGGLVDSGDYSEAFGL 198
++ N V+ K + +A +F M + +VVS+ +I G +GD A L
Sbjct: 216 ENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQL 275
Query: 199 FLFMWV---EFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDM 255
M + F + T+ +++ G + + +I +K GV + AL+D
Sbjct: 276 LGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDA 335
Query: 256 YSKCGSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKID 311
Y + GS ++A D+M K TV +NSI+ + G E A+S+ +M +ID
Sbjct: 336 YGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQID 395
Query: 312 HFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFD 371
FT +IV+R R ++ A + + DIV + L+ + + ++ A +
Sbjct: 396 RFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILG 455
Query: 372 RMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSG 427
M + + IS+ LI GY G+ E+A+++++ M++ N V + +++ +G
Sbjct: 456 SMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIV-----NG 510
Query: 428 LSERG 432
LS+RG
Sbjct: 511 LSKRG 515
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 148/339 (43%), Gaps = 20/339 (5%)
Query: 214 FATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQM- 272
F ++ A LG ++ S KMG + AL++ Y + G +A+ F +M
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 273 ---PEKTTVGWNSIIAGYA---LHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLA 326
PE + + + I+ + +EE L+ + S K D ++I + +
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 327 SLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKN----VISWN 382
+ E A++ +++V G V +L+ F + + ++ ++D+M R + V+S+
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVSKIYDQMQRSDIQPDVVSYA 325
Query: 383 ALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 442
LI YG + E+A+ +FE+ML V P H + +L A + SG+ E+ +F SM RD
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 443 HKVKPRAMHYACMIELLGREGLLDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLEL 499
++ P Y M+ ++ A F I+ FEP + L+ ++E
Sbjct: 386 -RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 444
Query: 500 GKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVL 538
EK+ G N +L I ++SG+ K L
Sbjct: 445 MMEVYEKMRL--SGIKANQTILTTIMDASGRCKNFGSAL 481
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 171/378 (45%), Gaps = 15/378 (3%)
Query: 92 AMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRV 151
A+ LF+ +E +G +V TY+ L++ LR I K+ M G EP+L N V
Sbjct: 224 ALTLFDKMETKGCLPNV--VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 152 LLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFN 207
+ + G M + + +M R D V++ T+I G G++ +A + M
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 208 DGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQC 267
T+ +++ + G + + G+ + L+D +S+ G + +A
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 268 AFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICV 323
+M + + V +N++I G+ + G E+A+++ +M++ G D + S V+
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 324 RLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV----I 379
R ++ A + +V G D + ++L+ + + R ++A +++ M R +
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 380 SWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 439
++ ALI Y G E+A+Q+ +M+ + V+P+ VT+ +++ + + + +
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 440 SRDHKVKPRAMHYACMIE 457
+ V P + Y +IE
Sbjct: 582 FYEESV-PSDVTYHTLIE 598
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 152/391 (38%), Gaps = 16/391 (4%)
Query: 169 GDMPERDVVSWMTVIGGLVDSG-DYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
G MP V+S+ V+ + S + S A +F M T+ ++R G I
Sbjct: 164 GFMP--GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNI 221
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP----EKTTVGWNSI 283
V + G + LID Y K I+D M E + +N +
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I G G +E + EM G +D T + +I+ + + A HA ++RHG
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQ 399
++ T+L+ K G M A D+M + N ++ L+ G+ G +A +
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 459
+ +M P+ VT+ A+++ +G E + M ++ + P + Y+ ++
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGF 460
Query: 460 GREGLLDEAFALIR---RAPFEPTKNMWVALLTA-CRMHGNLELGKFAAEKLYEMDPGKL 515
R +DEA + R +P + +L+ C E E L P
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 516 CNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
Y L+N Y G L++A + + KG+
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 154/414 (37%), Gaps = 74/414 (17%)
Query: 69 MKPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRG 128
+ PS S I + AME + + + G C + TY LV+ +
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN--ERTYTTLVDGFSQKGYMNE 398
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIG 184
+V M +GF P + N ++ H G M DA + DM E+ DVVS+ TV+
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 185 GLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSC-----ALK 239
G S D EA + M + + T++++++ G + R +C L+
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ-----GFCEQRRTKEACDLYEEMLR 513
Query: 240 MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTV-----------GWN------- 281
+G+ D F ALI+ Y G +E A ++M EK + G N
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 282 ------------------------------------SIIAGYALHGYSEEALSIYLEMRD 305
S+I G+ + G EA ++ M
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG 633
Query: 306 SGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMED 365
K D +I+I R + A + +V+ GF V ALV K G++ +
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Query: 366 ARHVFDRMHRKNVIS--WNALIAGYGNHGQG--EQAIQMFEQMLRERVIPNHVT 415
V + R +S A + NH +G + + + +M ++ +PN ++
Sbjct: 694 LNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 12/240 (5%)
Query: 317 IVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR-MEDARHVFDRMHR 375
+V++ RL+ ++ A HGF +++ A++D + R + A +VF M
Sbjct: 139 LVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE 198
Query: 376 K----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA-CSYSGLSE 430
NV ++N LI G+ G + A+ +F++M + +PN VT+ ++ C + +
Sbjct: 199 SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 431 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE-AFAL--IRRAPFEPTKNMWVAL 487
G+++ SM+ ++P + Y +I L REG + E +F L + R + + + L
Sbjct: 259 -GFKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 488 LTACRMHGNLELG-KFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
+ GN AE L + Y L++ +G + A L ++ +GL
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 178/384 (46%), Gaps = 15/384 (3%)
Query: 175 DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIH 234
DV+ + +I + + +A LF M + T+ ++ + AG+ L+ ++I
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 235 SCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWN-----SIIAGYAL 289
+ L G A+I Y + G + DA ++ M EKT V N S+I G+A
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM-EKTGVKPNEVVYGSLINGFAE 632
Query: 290 HGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVA 349
G EEA+ + M + G + +H ++ +I+ ++ LE A++ + + G D+ A
Sbjct: 633 SGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAA 692
Query: 350 NTALVDFYSKWGRMEDARHVFDRMHRK---NVISWNALIAGYGNHGQGEQAIQMFEQMLR 406
+ +++ + G + +A +F+ + K +VIS+ ++ Y G ++AI++ E+M
Sbjct: 693 SNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 407 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 466
++ + +F V++ + G E+F+ M + K+ + + LL + G+
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPS 812
Query: 467 EAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEMDPGKLCN----YVMLL 522
EA + ++ A + K + +TA + + L +A E E+ G++ Y ++
Sbjct: 813 EAVSQLQTA-YNEAKPLATPAITAT-LFSAMGLYAYALESCQELTSGEIPREHFAYNAVI 870
Query: 523 NIYNSSGKLKEAAGVLQTLKRKGL 546
Y++SG + A ++ KGL
Sbjct: 871 YTYSASGDIDMALKAYMRMQEKGL 894
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 180/450 (40%), Gaps = 41/450 (9%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGD 191
M +G P ++ ++ K GL+ +A M +R D V+ TV+ +SG+
Sbjct: 171 MAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGE 230
Query: 192 YSEAFGLF-----------LFMWVEFNDGRSRTFATMVRASAGLGLIQVG-RQIHSCALK 239
+ A F L +F S ++ + L +VG R +L
Sbjct: 231 FDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLH 290
Query: 240 MGVGGDSF--------VACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSIIAGY 287
G DS LID+Y K G + DA F +M + TV +N++I
Sbjct: 291 FASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTC 350
Query: 288 ALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDI 347
HG+ EA S+ +M + G D T +I++ + +E A + + + + G D
Sbjct: 351 GTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDT 410
Query: 348 VANTALVDFYSKWGRMEDARHVFDRMHRKNVI----SWNALIAGYGNHGQGEQAIQMFEQ 403
V + A++ + + + V M R ++ S ++ Y N G QA +FE+
Sbjct: 411 VTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER 470
Query: 404 MLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 463
+ V+ + T AV+ + GL +FY + + Y MI+ G+
Sbjct: 471 FQLDCVL-SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAK 529
Query: 464 LLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYEM-----DPGKLC-N 517
L ++A +L + + T + +M ++L A L EM PG C
Sbjct: 530 LHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPG--CKT 587
Query: 518 YVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
Y ++ Y G L +A + + +++ G++
Sbjct: 588 YAAMIASYVRLGLLSDAVDLYEAMEKTGVK 617
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/522 (21%), Positives = 209/522 (40%), Gaps = 81/522 (15%)
Query: 71 PSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVK 130
PS + + N+ + L E ++ G D+ TY +N +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDL--YTYSIFINCFCRRSQLSLAL 138
Query: 131 KVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGL 186
V M+ G+EPD+ ++ +L + + DA L M E D ++ T+I GL
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 187 VDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDS 246
SEA L MV+ L+ G ++ + GD
Sbjct: 199 FLHNKASEAVALV---------------DQMVQRGCQPDLVTYGTVVNGLCKR----GDI 239
Query: 247 FVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDS 306
+A +L+ K G IE V +N+II G + + ++AL+++ EM +
Sbjct: 240 DLALSLLKKMEK-GKIE-----------ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 307 GAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDA 366
G + D FT S +I A + + ++ ++V +AL+D + K G++ +A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 367 RHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSA 422
++D M ++ ++ ++++LI G+ H + ++A MFE M+ + PN VT+ ++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 423 CSYSGLSERGWEIFYSMS---------------------RDHK-------------VKPR 448
+ E G E+F MS RD V P
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 449 AMHYACMIELLGREGLLDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLELG--KFA 503
+ Y +++ L + G L +A F ++R+ EP + ++ G +E G F
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 504 AEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
L + P + Y +++ + G +EA +L+ +K G
Sbjct: 528 NLSLKGVSPNVIA-YNTMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 176/390 (45%), Gaps = 19/390 (4%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP----ERDVVSWMTVIGGLVDSGD 191
M+ G +PDL V+ K G + A L M E DVV + T+I GL
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 192 YSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACA 251
+A LF M + T+++++ G ++ S ++ + + A
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKTT----VGWNSIIAGYALHGYSEEALSIYLEMRDSG 307
LID + K G + +A+ +D+M +++ ++S+I G+ +H +EA ++ M
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 308 AKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDAR 367
+ T S +I+ + +E + + + G + V T L+ + + ++A+
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 368 HVFDRMH----RKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSAC 423
VF +M N++++N L+ G +G+ +A+ +FE + R + P+ T+ ++
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 424 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFE---PT 480
+G E GWE+F ++S V P + Y MI R+G +EA +L+++ + P
Sbjct: 514 CKAGKVEDGWELFCNLSL-KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 481 KNMWVALLTACRMHGNLELGKFAAEKLYEM 510
+ L+ A G+ E +AE + EM
Sbjct: 573 SGTYNTLIRARLRDGDREA---SAELIKEM 599
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 133/297 (44%), Gaps = 13/297 (4%)
Query: 262 IEDAQCAFDQM----PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISI 317
++DA F M P + V +N +++ A E +S+ +M+ G D +T SI
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 318 VIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM---- 373
I R + L A A +++ G+ DIV ++L++ Y R+ DA + D+M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 374 HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 433
++ + ++ LI G H + +A+ + +QM++ P+ VT+ V++ G +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 434 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRRAPFEPTKNMWVALLTA 490
+ M + K++ + Y +I+ L + +D+A F + P + +L++
Sbjct: 244 SLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 491 CRMHGNL-ELGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
+G + + ++ + + + L++ + GKL EA + + ++ +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 156/351 (44%), Gaps = 13/351 (3%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP----ERDVVSWMTVIGGLVDSGD 191
MI G EP + +L + + DA +F M + +VV + T+I GL S
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 192 YSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACA 251
A L M + T+ +++ G ++ SC K + D F A
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKT----TVGWNSIIAGYALHGYSEEALSIYLEMRDSG 307
LID K G + +A+ +++M ++ V ++ +I G ++ +EA ++ M G
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 308 AKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDAR 367
D T SI+I + +EH + + + G + V T L+ Y + G++ A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 368 HVFDRMH----RKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSAC 423
+F RM N+I++N L+ G ++G+ E+A+ + M + + + VT+ ++
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 424 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
+G W+I+ S++ + P Y M+ L ++GL EA AL R+
Sbjct: 442 CKAGEVADAWDIYCSLNC-QGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 193/465 (41%), Gaps = 50/465 (10%)
Query: 111 STYDALVNVCVGLRSIRGVKKV-----FNYMISSGFEPDLYMMNRVLLMHVKCGLMLDAR 165
STY L++V +G KV M G +PD VL M+ K A
Sbjct: 223 STYGTLIDVYS-----KGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAE 277
Query: 166 KLFG----DMPERDV------VSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFA 215
+ F D + D ++ T+I SG EA F M E + TF
Sbjct: 278 EFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFN 337
Query: 216 TMVRASAGLGLIQVGRQIHSC--ALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMP 273
TM+ G Q+G ++ S +K+ D+ LI +++K IE A F +M
Sbjct: 338 TMIHIYGNNG--QLG-EVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMK 394
Query: 274 EK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLE 329
+ V + +++ +++ EEA + EM D +ID +T S + R+ V LE
Sbjct: 395 DDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLE 454
Query: 330 HA----KQAHAA--LVRHGFGSDIVANTALVDFYSKWGRMEDARHVF---DRMHRKNVIS 380
+ K+ H A + G+ ++I D Y + G + +A VF ++++ VI
Sbjct: 455 KSWSWFKRFHVAGNMSSEGYSANI-------DAYGERGYLSEAERVFICCQEVNKRTVIE 507
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 440
+N +I YG E+A ++FE M+ V P+ T+ ++ + + + +G +
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKG-RCYLEKM 566
Query: 441 RDHKVKPRAMHYACMIE---LLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNL 497
R+ + Y +I LG+ + +E + + EP ++ L+ A GN+
Sbjct: 567 RETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNV 626
Query: 498 ELGKFAAEKLYEMD-PGKLCNYVMLLNIYNSSGKLKEAAGVLQTL 541
+ E + E PG Y L+ +Y G L EA + + L
Sbjct: 627 QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL 671
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 156/348 (44%), Gaps = 17/348 (4%)
Query: 159 GLMLDARKLF---GDMPERDVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFA 215
G + +A ++F ++ +R V+ + +I S +A LF M T+
Sbjct: 485 GYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYN 544
Query: 216 TMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK 275
T+V+ A + GR + G D CA+I + K G + A+ + +M E
Sbjct: 545 TLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEY 604
Query: 276 T----TVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHA 331
V + +I +A G ++A+S M+++G + + +I++ ++ L+ A
Sbjct: 605 NIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEA 664
Query: 332 KQAHAALVRHGFGS---DIVANTALVDFYSKWGRMEDARHVFDRMHRK---NVISWNALI 385
+ + L++ + D+ + +++ YS+ + A +FD M ++ N ++ ++
Sbjct: 665 EAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMML 724
Query: 386 AGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 445
Y +G+ E+A Q+ +QM +++ + +++ +VL + G + E F M +
Sbjct: 725 CMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMV-SSGI 783
Query: 446 KPRAMHYACMIELLGREGLLDEA---FALIRRAPFEPTKNMWVALLTA 490
+P + + +L + G+ +A IR+ + +W++ L++
Sbjct: 784 QPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSS 831
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 176/413 (42%), Gaps = 12/413 (2%)
Query: 71 PSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVK 130
PS + K+ + + LF +E+ G D+ +Y+ ++N
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL--YSYNIVINCLCRCSRFVIAL 124
Query: 131 KVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGL 186
V M+ G+EPD+ ++ ++ + + DA L M E DVV + T+I G
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 187 VDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDS 246
G ++A LF M + + T+ ++V G ++ + + +
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 247 FVACALIDMYSKCGSIEDAQCAFDQMPEKTT----VGWNSIIAGYALHGYSEEALSIYLE 302
A+ID++ K G +A +++M + +NS+I G +HG +EA +
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
M G D T + +I + ++ + + + G D + ++ Y + GR
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 363 MEDARHVFDRM-HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS 421
+ A+ +F RM R N+ +++ L+ G + + E+A+ +FE M + + + T+ V+
Sbjct: 365 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 424
Query: 422 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
G E W++F S+S +KP + Y MI R+ D++ L R+
Sbjct: 425 GMCKIGNVEDAWDLFRSLSC-KGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 134/289 (46%), Gaps = 23/289 (7%)
Query: 273 PEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAK 332
P + V ++ +++ A + +S++ M G D ++ +IVI R + A
Sbjct: 65 PLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIAL 124
Query: 333 QAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH----RKNVISWNALIAGY 388
+++ G+ D+V ++L++ + + R+ DA + +M R +V+ +N +I G
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 389 GNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD---HKV 445
G A+++F++M R+ V + VT+ ++++ SG W + RD +
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG----RWSDAARLMRDMVMRDI 240
Query: 446 KPRAMHYACMIELLGREGLLDEAFAL---IRRAPFEPTKNMWVALLTACRMHGNLELGKF 502
P + + +I++ +EG EA L + R +P + +L+ MHG ++
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD---- 296
Query: 503 AAEKLYEMDPGKLC-----NYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
A+++ ++ K C Y L+N + S ++ E + + + ++GL
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 155/355 (43%), Gaps = 35/355 (9%)
Query: 33 FPRIRCSSSMEQ-GLRPKPKKTEYVDRKMPVLDDAQIMKPSTPGLCSQIEKLGLCNRHRE 91
F I S ME+ G RP D I G C K+GL N +
Sbjct: 156 FDAIDLVSKMEEMGFRP----------------DVVIYNTIIDGSC----KIGLVN---D 192
Query: 92 AMELFEILELEGDCADVGASTYDALVN--VCVGLRSIRGVKKVFNYMISSGFEPDLYMMN 149
A+ELF+ +E +G AD A TY++LV C G S ++ M+ P++
Sbjct: 193 AVELFDRMERDGVRAD--AVTYNSLVAGLCCSGRWS--DAARLMRDMVMRDIVPNVITFT 248
Query: 150 RVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVE 205
V+ + VK G +A KL+ +M R DV ++ ++I GL G EA + M +
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 206 FNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDA 265
T+ T++ + G ++ + G+ GD+ +I Y + G + A
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 266 QCAFDQMPEKTTVGWNSIIA-GYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
Q F +M + + SI+ G ++ E+AL ++ M+ S ++D T +IVI +
Sbjct: 369 QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVI 379
+ ++E A +L G D+V+ T ++ + + + + + ++ +M ++
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 152/354 (42%), Gaps = 17/354 (4%)
Query: 70 KPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV 129
+P + S I NR +A++L +E G DV Y+ +++ + +
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV--VIYNTIIDGSCKIGLVNDA 193
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVV----SWMTVIGG 185
++F+ M G D N ++ G DA +L DM RD+V ++ VI
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD 245
V G +SEA L+ M D T+ +++ G + +Q+ + G D
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 246 SFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG----WNSIIAGYALHGYSEEALSIYL 301
LI+ + K +++ F +M ++ VG +N+II GY G + A I+
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
M DS I ++I ++ +C+ +E A + + DI ++ K G
Sbjct: 374 RM-DSRPNIRTYSI-LLYGLCMNW-RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 362 RMEDARHVFDRMH----RKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIP 411
+EDA +F + + +V+S+ +I+G+ Q +++ ++ +M + ++P
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 158/351 (45%), Gaps = 13/351 (3%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMP----ERDVVSWMTVIGGLVDSGD 191
M+ G +P+L V+ K G A L M E DVV + T+I L
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 192 YSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACA 251
+A LF M + T+++++ G Q+ S ++ + + A
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEKTT----VGWNSIIAGYALHGYSEEALSIYLEMRDSG 307
LID + K G +A+ +D M +++ +NS++ G+ +H ++A ++ M
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 308 AKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDAR 367
D T + +I+ + +E + + G D V T L+ G ++A+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 368 HVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSAC 423
VF +M ++++++ L+ G N+G+ E+A+++F+ M + + + + ++
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 424 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
+G + GW++F S+S VKP + Y MI L + LL EA+AL+++
Sbjct: 516 CKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/472 (20%), Positives = 197/472 (41%), Gaps = 27/472 (5%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
E M+ EI+ G TY+ L+N I + M+ G+EP + ++
Sbjct: 109 EKMQRLEIVH--------GLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 151 VLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+L + + DA L M E D +++ T+I GL SEA L M
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
T+ +V G + + + + D + +ID K ++DA
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 267 CAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC 322
F +M K V ++S+I+ +G +A + +M + + T + +I
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 323 VRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NV 378
V+ A++ + +++ DI +LV+ + R++ A+ +F+ M K +V
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 379 ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 438
+++N LI G+ + E ++F +M ++ + VT+ ++ + G + ++F
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 439 MSRDHKVKPRAMHYACMIELLGREGLLD---EAFALIRRAPFEPTKNMWVALLTACRMHG 495
M D V P M Y+ +++ L G L+ E F ++++ + ++ ++ G
Sbjct: 461 MVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 496 NLELG--KFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
++ G F + L + P + Y +++ S L+EA +L+ +K G
Sbjct: 520 KVDDGWDLFCSLSLKGVKP-NVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 174/416 (41%), Gaps = 15/416 (3%)
Query: 70 KPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV 129
+P T + I L L N+ EA+ L + + G TY +VN
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGG 185
+ N M ++ E D+ + N ++ K + DA LF +M + +VV++ ++I
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD 245
L G +S+A L M + + TF ++ A G +++ +K + D
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 246 SFVACALIDMYSKCGSIEDAQCAFDQMPEKT----TVGWNSIIAGYALHGYSEEALSIYL 301
F +L++ + ++ A+ F+ M K V +N++I G+ E+ ++
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
EM G D T + +I+ ++A++ +V G DI+ + L+D G
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 362 RMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
++E A VFD M + ++ + +I G G+ + +F + + V PN VT+
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 418 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 473
++S L + + + M D + P + Y +I R+G + LIR
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIR 599
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 118/513 (23%), Positives = 211/513 (41%), Gaps = 49/513 (9%)
Query: 85 LCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPD 144
LC+ + I E+ G STY ++N + +F M G D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 145 LYMMNRVLLMHVKCGLMLDARKLFGDMPE----RDVVSWMTVIGGLVDSGDYSEAFGLFL 200
+Y ++ K GL+ ARK F +M E +VV++ +I + + S A LF
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 201 FMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHS--CALKMGVGGDSFVA--------- 249
M E T++ ++ G ++ QI C K D +
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 250 -----CALIDMYSKCGSIEDAQCAFDQMP----EKTTVGWNSIIAGYALHGYSEEALSIY 300
AL+D + K +E+A+ D M E + ++++I G G +EA +
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 301 LEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKW 360
EM + G +T S +I ++ + A + + ++ + ++V T ++D K
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 361 GRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTF 416
G+ ++A + M K NV+++ A+I G+G G+ E +++ E+M + V PN+VT+
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 417 LAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE-----GLLDEAFAL 471
++ C +G + + M + H A Y +IE +E GLLDE
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA-GYRKVIEGFNKEFIESLGLLDE-IGQ 875
Query: 472 IRRAPFEPTKNMWV-ALLTACRMHGNL----ELGKFAAEKL-YEMDPGKLCNYVMLLNIY 525
APF + + L+ A R+ L E+ F+A + Y L + L N
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN-- 933
Query: 526 NSSGKLKEAAGVLQTLKRKGL--RMLPTCTWIE 556
K++ A + + +KG+ M C+ I+
Sbjct: 934 ----KVETAFQLFSEMTKKGVIPEMQSFCSLIK 962
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/513 (20%), Positives = 201/513 (39%), Gaps = 63/513 (12%)
Query: 84 GLC--NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGF 141
GLC + EAM+ + +V TY L+ C+ + + K+V N M+ G
Sbjct: 311 GLCEASLFEEAMDFLNRMRATSCLPNV--VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGC 368
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLF------GDMPERDVVSWMTVIGGLVDSGDY--- 192
P + N ++ + G A KL G MP V + +IG + D
Sbjct: 369 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP--GYVVYNILIGSICGDKDSLNC 426
Query: 193 ------SEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDS 246
+A+ L V N +F R G + + + G D+
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDT 483
Query: 247 FVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG----WNSIIAGYALHGYSEEALSIYLE 302
+++ +E A F++M V + ++ + G E+A + E
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 303 MRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGR 362
MR+ G + T + +I ++ + +A + ++ G +IV +AL+D + K G+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 363 MEDARHVFDRM--------------------HRKNVISWNALIAGYGNHGQGEQAIQMFE 402
+E A +F+RM R NV+++ AL+ G+ + E+A ++ +
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 403 QMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIEL---L 459
M E PN + + A++ G + E+ MS +H Y+ +I+ +
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS-EHGFPATLYTYSSLIDRYFKV 722
Query: 460 GREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELGKF-AAEKLYEMDPGKLC-- 516
R+ L + + + P ++ ++ G ++GK A KL +M K C
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMI-----DGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 517 ---NYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
Y +++ + GK++ +L+ + KG+
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 164/372 (44%), Gaps = 19/372 (5%)
Query: 132 VFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLV 187
+ + M+ +G +PD+ N ++ + G A L M ER DV ++ T+I L
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 188 DSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSF 247
G A LF M + T+ ++VR G G + + + +
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299
Query: 248 VACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEM 303
L+D++ K G +++A + +M + + +N+++ GY + EA ++ M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 304 RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRM 363
+ D T + +I+ + ++ + + + G ++ V + LV + + G++
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 364 EDARHVFDRMHR----KNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAV 419
+ A +F M +V+++ L+ G ++G+ E+A+++FE + + ++ V + +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 420 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR----- 474
+ G E W +F S+ VKP M Y MI L ++G L EA L+R+
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPC-KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 475 -APFEPTKNMWV 485
AP + T N +
Sbjct: 539 NAPNDCTYNTLI 550
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 171/416 (41%), Gaps = 17/416 (4%)
Query: 70 KPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV 129
+P T + I+ L L + EA+ L + + G DV TY+++VN
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV--VTYNSIVNGICRSGDTSLA 212
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGG 185
+ M + D++ + ++ + G + A LF +M + VV++ +++ G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD 245
L +G +++ L M TF ++ G +Q +++ + G+ +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 246 SFVACALIDMYSKCGSIEDAQCAFDQMPEKT----TVGWNSIIAGYALHGYSEEALSIYL 301
L+D Y + +A D M V + S+I GY + ++ + ++
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
+ G + T SI+++ + ++ A++ +V HG D++ L+D G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 362 RMEDARHVFDRMHRKN----VISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
++E A +F+ + + ++ + +I G G+ E A +F + + V PN +T+
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512
Query: 418 AVLSA-CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI 472
++S C LSE + M D P Y +I R+G L + LI
Sbjct: 513 VMISGLCKKGSLSEANI-LLRKMEEDGNA-PNDCTYNTLIRAHLRDGDLTASAKLI 566
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 111/533 (20%), Positives = 218/533 (40%), Gaps = 64/533 (12%)
Query: 71 PSTPGLCSQIEKLGLCNRHR--EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRG 128
P+ C+ I G C R A +LF+++E G D+ A Y L++ +
Sbjct: 284 PNVVTFCTLIN--GFCKRGEMDRAFDLFKVMEQRGIEPDLIA--YSTLIDGYFKAGMLGM 339
Query: 129 VKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM----PERDVVSWMTVIG 184
K+F+ + G + D+ + + + ++VK G + A ++ M +VV++ +I
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 185 GLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGG 244
GL G EAFG++ + + T+++++ G ++ G ++ +KMG
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 245 DSFVACALIDMYSKCGSIEDAQ----CAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIY 300
D + L+D SK G + A Q V +NS+I G+ +EAL ++
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 301 LEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKW 360
M G K D T + V+R+ + LE A + + G D +A L+D + K
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Query: 361 GRMEDARHVFDRMHRK---------------------------------------NVISW 381
+ +FD M R +++++
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 382 NALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 441
N +I GY + + ++A ++FE + PN VT ++ + + +F M+
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA- 698
Query: 442 DHKVKPRAMHYACMIELLGREGLLDEAFAL---IRRAPFEPTKNMWVALLTACRMHGNLE 498
+ KP A+ Y C+++ + ++ +F L ++ P+ + ++ G ++
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 499 LGKFAAEKLYEMDPGKL----CNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR 547
A ++ KL Y +L+ Y G+L EAA + + + R G++
Sbjct: 759 E---ATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 162/417 (38%), Gaps = 90/417 (21%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGAS----TYDALVNVCVGLRSIRGVKKVFNYMISS 139
GLC R ++E + G G TY +L++ ++R ++ MI
Sbjct: 400 GLCQDGR----IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 140 GFEPDLYMMNRVLLMHVKCGLMLDAR----KLFGDMPERDVVSWMTVIGGLVDSGDYSEA 195
G+ PD+ + ++ K GLML A K+ G +VV + ++I G + EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 196 FGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDM 255
+F M + TF T++R S G ++ + KMG+ D+ C LID
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 256 YSK-----------------------------------CGSIEDAQCAFDQMPE----KT 276
+ K C IEDA F+ + E
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 277 TVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRI---------CVRLAS 327
V +N++I GY +EA I+ ++ + + T++I+I + +R+ S
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695
Query: 328 LEHAKQAHAALVRHG--------------------------FGSDIVANTALVDFYSKWG 361
+ K + V +G IV+ + ++D K G
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 362 RMEDARHVF----DRMHRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHV 414
R+++A ++F D +V+++ LI GY G+ +A ++E MLR V P+ +
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 127/300 (42%), Gaps = 13/300 (4%)
Query: 268 AFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLAS 327
D P V + ++I G+ G + A ++ M G + D S +I +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 328 LEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH----RKNVISWNA 383
L + + + G D+V ++ +D Y K G + A V+ RM NV+++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 384 LIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 443
LI G G+ +A M+ Q+L+ + P+ VT+ +++ G G+ ++ M +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-M 455
Query: 444 KVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTA----CRMHGNLE- 498
P + Y +++ L ++GL+ A + + + V + CR++ E
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 499 LGKFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLR--MLPTCTWIE 556
L F +Y + P + + ++ + G+L+EA + + + GL L CT I+
Sbjct: 516 LKVFRLMGIYGIKP-DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 178/417 (42%), Gaps = 50/417 (11%)
Query: 70 KPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV 129
+P T + I L L N+ EA+ L + + G TY +VN I
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDLA 169
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGG 185
+ N M ++ E D+ + N ++ K + DA LF +M + +VV++ ++I
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD 245
L G +S+A S+ + M+ L+
Sbjct: 230 LCSYGRWSDA---------------SQLLSDMIEKKINPNLVTFN--------------- 259
Query: 246 SFVACALIDMYSKCGSIEDAQCAFDQMPEKTT----VGWNSIIAGYALHGYSEEALSIYL 301
ALID + K G +A+ D M +++ +NS+I G+ +H ++A ++
Sbjct: 260 -----ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
M D T + +I+ + +E + + G D V T L+ G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 362 RMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFL 417
++A+ VF +M ++++++ L+ G N+G+ E+A+++F+ M + + + +
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434
Query: 418 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
++ +G + GW++F S+S VKP + Y MI L + LL EA+AL+++
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSL-KGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 189/451 (41%), Gaps = 19/451 (4%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY+ L+N I + M+ G+EP + ++ +L + + DA L M
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 172 PER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
E D +++ T+I GL SEA L M T+ +V G I
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSI 283
+ + + + D + +ID K ++DA F +M K V ++S+
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I+ +G +A + +M + + T + +I V+ A++ H +++
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNVI----SWNALIAGYGNHGQGEQAIQ 399
DI +L++ + R++ A+ +F+ M K+ ++N LI G+ + E +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 459
+F +M ++ + VT+ ++ + G + ++F M D V P M Y+ +++ L
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGL 405
Query: 460 GREGLLD---EAFALIRRAPFEPTKNMWVALLTACRMHGNLELG--KFAAEKLYEMDPGK 514
G L+ E F ++++ + ++ ++ G ++ G F + L + P
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN- 464
Query: 515 LCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
+ Y +++ S L+EA +L+ +K G
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 204/492 (41%), Gaps = 52/492 (10%)
Query: 71 PSTPGLCSQIEKLGLCNRHREAMELF-EILELEGDCADVGAST--YDALVNVCVGLRSIR 127
PS+ L ++ L + R + +F ILE +D S Y + V L +
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILE-----SDFRPSKFMYGKAIQAAVKLSDVG 196
Query: 128 GVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVI 183
++FN M P +++ N ++ K M DA +LF +M R ++++ T+I
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 184 GGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVG 243
G +G+ ++F + M + + TF T+++ G+++ + +G
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 244 GDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEM 303
D+F L D GY+ + +E AL +Y
Sbjct: 317 PDAFTFSILFD-------------------------------GYSSNEKAEAALGVYETA 345
Query: 304 RDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRM 363
DSG K++ +T SI++ + +E A++ + G + V ++D Y + G +
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 364 EDARHVFDRMHRKNV----ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAV 419
AR + M ++ + +++N LI + G+ E A + +M + V P+ T+ +
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 420 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAP--- 476
+ ++ ++I M D+ P + Y +I L + L EA + R
Sbjct: 466 IGGYGRKYEFDKCFDILKEM-EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524
Query: 477 FEPTKNMWVALLTACRMHGNLELG-KFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAA 535
P ++ L+ C G +E +F+ E L + L Y L++ + +GKL EA
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 536 GVLQTLKRKGLR 547
+L + RKGL+
Sbjct: 585 DLLLEISRKGLK 596
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/477 (21%), Positives = 187/477 (39%), Gaps = 95/477 (19%)
Query: 84 GLCN--RHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGF 141
GLC R +A +LF+ E+ TY+ L++ + KV M +
Sbjct: 223 GLCKGKRMNDAEQLFD--EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHI 280
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPE----RDVVSWMTVIGGL----------- 186
EP L N +L K G++ DA + +M + D ++ + G
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340
Query: 187 -----VDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQ------------- 228
VDSG A+ + + +G+ ++ GL+
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 229 -----VGRQIHSCAL-KMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTV 278
VG ++ A+ K G+ D LI + + G +E+A+ ++M K +
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 279 GWNSIIAGYALHGYSEEALSIYLEMRDSGA----------------------------KI 310
+N +I GY ++ I EM D+G +
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 311 DHFTISIVIRI-------CVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRM 363
+ +S +RI C +E A + +++ G ++V L+D S G++
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 364 EDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAV 419
+A + + RK +V ++N+LI+GYG G ++ I ++E+M R + P T+ +
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Query: 420 LSACSYSG--LSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRR 474
+S C+ G L+ER +F MS +KP + Y ++ G +++AF L ++
Sbjct: 641 ISLCTKEGIELTER---LFGEMS----LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 121/531 (22%), Positives = 202/531 (38%), Gaps = 75/531 (14%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
EA +LF L EG + T L++ V + R VF ++ S F P +M +
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTL--LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 151 VLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
+ VK + +LF M V + +I GL ++A LF M
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR- 243
Query: 207 NDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQ 266
R +++ + LID Y K G+ E +
Sbjct: 244 -----RLLPSLITYNT-----------------------------LIDGYCKAGNPEKSF 269
Query: 267 CAFDQMP----EKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRIC 322
++M E + + +N+++ G G E+A ++ EM+D G D FT SI+
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 323 VRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NV 378
E A + V G + + L++ K G++E A + R K N
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 379 ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 438
+ +N +I GY G A E M ++ + P+H+ + ++ G E +
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 439 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVA--LLTACRMHGN 496
M + V P Y +I GR+ D+ F +++ T V+ L C G+
Sbjct: 450 M-KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGS 508
Query: 497 LELGKFAAEKLYEMDPG---KLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGLRMLPTCT 553
L ++ E D G K+ Y ML++ S GK+++A + + +KG
Sbjct: 509 KLLEAQIVKRDME-DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG-------- 559
Query: 554 WIEVKKQPHAFLCGDKSHTQTKEIYQKVDEILDEISRHGYIKENEMLLPDV 604
IE+ + L S T + +++L EISR G L PDV
Sbjct: 560 -IELNLVTYNTLIDGLSMTGK---LSEAEDLLLEISRKG-------LKPDV 599
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 18/306 (5%)
Query: 128 GVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVI 183
G + M G +PD N ++ + G M +A K M + V ++ +I
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 184 GGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMV----RASAGLGLIQVGRQIHSCALK 239
GG ++ + F + M ++ T++ + S L V R +
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED---- 522
Query: 240 MGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEE 295
GV + LID G IEDA +M +K V +N++I G ++ G E
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 296 ALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVD 355
A + LE+ G K D FT + +I +++ + + R G + L+
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 356 FYSKWGRMEDARHVFDRMHRK-NVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHV 414
+K G +E +F M K +++ +N ++ Y HG E+A + +QM+ + + +
Sbjct: 643 LCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKT 701
Query: 415 TFLAVL 420
T+ +++
Sbjct: 702 TYNSLI 707
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 195/451 (43%), Gaps = 19/451 (4%)
Query: 112 TYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDM 171
TY+ L+N I + M+ G+EP + ++ +L + + DA L M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 172 PER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLI 227
E D +++ T+I GL SEA L M T+ +V G I
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 228 QVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSI 283
+ + + + + + +ID K +DA F +M K + ++S+
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 284 IAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGF 343
I+ + +A + +M + + T + +I V+ L A++ + +++
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 344 GSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGEQAIQ 399
DI ++L++ + R+++A+H+F+ M K NV+++N LI G+ + ++ ++
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 400 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 459
+F +M + ++ N VT+ ++ + + +F M D V P M Y +++ L
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGL 480
Query: 460 GREGLLDEA---FALIRRAPFEPTKNMWVALLTACRMHGNLELG--KFAAEKLYEMDPGK 514
+ G L++A F ++R+ EPT + ++ G +E G F + L + P
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540
Query: 515 LCNYVMLLNIYNSSGKLKEAAGVLQTLKRKG 545
+ Y +++ + G +EA + + ++ G
Sbjct: 541 II-YNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 157/393 (39%), Gaps = 49/393 (12%)
Query: 70 KPSTPGLCSQIEKLGLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGV 129
+P T + I L L N+ EA+ L + + G TY +VN I
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 130 KKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGG 185
+ N M ++ E ++ + + V+ K DA LF +M + +V+++ ++I
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 186 LVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGD 245
L + +S+A L M + TF ++ A G + +++ +K + D
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 246 SFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYL 301
F +LI+ + +++A+ F+ M K V +N++I G+ +E + ++
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 302 EMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWG 361
EM G + T + +I + ++A+ +V G +I+ L+D K G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 362 RMEDARHVFDRMHRK---------------------------------------NVISWN 382
++E A VF+ + R +VI +N
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 383 ALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVT 415
+I+G+ G E+A +F +M + +P+ T
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 176/424 (41%), Gaps = 27/424 (6%)
Query: 86 CNRHR-EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKK---VFNYMISSGF 141
CN R EA+ + E+E + D + Y +++ G + KK VF + GF
Sbjct: 428 CNMERAEAL----VREMEEEGIDAPIAIYHTMMD---GYTMVADEKKGLVVFKRLKECGF 480
Query: 142 EPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVV----SWMTVIGGLVDSGDYSEAFG 197
P + ++ ++ K G + A ++ M E V ++ +I G V D++ AF
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 198 LFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYS 257
+F M E + ++ A G+G + Q K+ + +I Y+
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 258 KCGSIEDAQCAFDQMPE----KTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHF 313
K G + + FD M T +N +I G E+A+ I EM +G +
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 314 TISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRM 373
T + +++ + A + L G DI AL+ K GRM+ A V M
Sbjct: 661 TYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM 720
Query: 374 HRKNV----ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLS 429
+N+ +N LI G+ G +A + +QM +E V P+ T+ + +SACS +G
Sbjct: 721 SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 430 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL---IRRAPFEPTKNMWVA 486
R + M VKP Y +I+ R L ++A + ++ +P K ++
Sbjct: 781 NRATQTIEEME-ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHC 839
Query: 487 LLTA 490
LLT+
Sbjct: 840 LLTS 843
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 201/499 (40%), Gaps = 71/499 (14%)
Query: 54 EYVDRKMPVLDDAQI---MKPSTPGLCSQIEKLGLCNRHREAMELFEIL-ELEGDCADVG 109
E V K L D I + P S IE G C R + + +E+L E++ +
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIE--GYC-REKNVRQGYELLVEMKKRNIVIS 416
Query: 110 ASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFG 169
TY +V + G + MI+SG P++ + ++ ++ DA ++
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 170 DMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTF------ATMVR 219
+M E+ D+ + ++I GL + EA FL VE N + F + +
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS-FLVEMVE-NGLKPNAFTYGAFISGYIE 534
Query: 220 ASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTVG 279
AS + +++ C GV + + LI+ Y K G + +A A+ M ++ +G
Sbjct: 535 ASEFASADKYVKEMREC----GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 280 ----WNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAH 335
+ ++ G + ++A I+ EMR G D F+ ++I +L +++ A
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 336 AALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNH 391
+V G +++ L+ + + G +E A+ + D M K N +++ +I GY
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 392 GQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR---------- 441
G +A ++F++M + ++P+ + ++ C ER IF + +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFN 770
Query: 442 ---------------------------DHKVKPRAMHYACMIELLGREGLLD---EAFAL 471
D KP + Y MI+ L +EG L+ E F
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 472 IRRAPFEPTKNMWVALLTA 490
++ A PT + +LL
Sbjct: 831 MQNANLMPTVITYTSLLNG 849
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 163/381 (42%), Gaps = 22/381 (5%)
Query: 110 ASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFG 169
A TY A ++ + K M G P+ + ++ + K G +++A +
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 170 DMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLG 225
M ++ D ++ ++ GL + +A +F M + ++ ++ + LG
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 226 LIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEK----TTVGWN 281
+Q I ++ G+ + + L+ + + G IE A+ D+M K V +
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701
Query: 282 SIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRH 341
+II GY G EA ++ EM+ G D F + ++ C RL +E A +
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKK 760
Query: 342 GFGSDIVANTALVDFYSKWGRMEDARHV--------FDRMHRKNVISWNALIAGYGNHGQ 393
G S AL+++ K+G+ E V FDR + N +++N +I G
Sbjct: 761 GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 394 GEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF--YSMSRDHKVKPRAMH 451
E A ++F QM ++P +T+ ++L+ Y + R E+F + + ++P +
Sbjct: 821 LEAAKELFHQMQNANLMPTVITYTSLLNG--YDKMGRRA-EMFPVFDEAIAAGIEPDHIM 877
Query: 452 YACMIELLGREGLLDEAFALI 472
Y+ +I +EG+ +A L+
Sbjct: 878 YSVIINAFLKEGMTTKALVLV 898
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 183/459 (39%), Gaps = 53/459 (11%)
Query: 84 GLCNRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEP 143
GLC R ++E++ + TY L++ + R+ K + + M+S G
Sbjct: 286 GLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 144 DLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVV----SWMTVIGGLVDSGDYSEAFGLF 199
YM + + + K G+M A+ LF M ++ ++ ++I G + + + L
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 200 LFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKC 259
+ M T+ T+V+ G + I + G + + LI + +
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 260 GSIEDAQCAFDQMPEKTTVG----WNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTI 315
DA +M E+ +NS+I G + +EA S +EM ++G K + FT
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 316 SIVIR----------------------------ICVRLASLEHAKQ--------AHAALV 339
I +C L + E+ K+ A+ ++V
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN-EYCKKGKVIEACSAYRSMV 584
Query: 340 RHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRK----NVISWNALIAGYGNHGQGE 395
G D T L++ K +++DA +F M K +V S+ LI G+ G +
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 396 QAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 455
+A +F++M+ E + PN + + +L SG E+ E+ MS + P A+ Y +
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTYCTI 703
Query: 456 IELLGREGLLDEAFALIRRAPFE---PTKNMWVALLTAC 491
I+ + G L EAF L + P ++ L+ C
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 154/356 (43%), Gaps = 24/356 (6%)
Query: 87 NRHREAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLY 146
++ +A E+F + +G DV +Y L+N L +++ +F+ M+ G P++
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDV--FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 147 MMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDYSEAFGLFLFM 202
+ N +L + G + A++L +M + + V++ T+I G SGD +EAF LF M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 203 WVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSI 262
++ S + T+V L ++ I K G + ALI+ K G
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKT 782
Query: 263 EDA--------QCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFT 314
E +FD+ + V +N +I G E A ++ +M+++ T
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 315 ISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMH 374
+ ++ ++ + G D + + +++ + K G A + D+M
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 375 RKNVI---------SWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLS 421
KN + + AL++G+ G+ E A ++ E M+R + IP+ T + +++
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/451 (19%), Positives = 183/451 (40%), Gaps = 21/451 (4%)
Query: 125 SIRGVKKVFNYMISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPERDVV----SWM 180
++ G K+ MI G P Y + ++ K + DA+ L +M V ++
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 181 TVIGGLVDSGDYSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKM 240
+I GL+ + A GL M + + + + + G+++ + + +
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 241 GVGGDSFVACALIDMYSKCGSIEDAQCAFDQMPEKTTV----GWNSIIAGYALHGYSEEA 296
G+ + +LI+ Y + ++ +M ++ V + +++ G G + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 297 LSIYLEMRDSGAKIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDF 356
+I EM SG + + + +I+ ++ + A + + G DI +L+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 357 YSKWGRMEDARHVFDRM----HRKNVISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPN 412
SK RM++AR M + N ++ A I+GY + A + ++M V+PN
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 413 HVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---F 469
V +++ G + SM D + A Y ++ L + +D+A F
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMV-DQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 470 ALIRRAPFEPTKNMWVALLTACRMHGNLELGKFAAEKLYE--MDPGKLCNYVMLLNIYNS 527
+R P + L+ GN++ +++ E + P + Y MLL +
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII-YNMLLGGFCR 674
Query: 528 SGKLKEAAGVLQTLKRKGL--RMLPTCTWIE 556
SG++++A +L + KGL + CT I+
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 189/466 (40%), Gaps = 77/466 (16%)
Query: 91 EAMELFEILELEGDCADVGASTYDALVNVCVGLRSIRGVKKVFNYMISSGFEPDLYMMNR 150
+A+E+ +++ +G + +STY+ L+ +++ M+S GF +
Sbjct: 383 KAIEIKDLMVSKG--LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 151 VLLMHVKCGLMLDARKLFGDMPERDVVS----WMTVIGGLVDSGDYSEAFGLFLFMWVEF 206
V+ + + A + G+M R++ T+I GL G +S+A L +W +F
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA----LELWFQF 496
Query: 207 NDGRSRTFATMVRASAGL--GLIQVGRQIHSCALKMGVGGDSFVACALIDMYSKCGSIED 264
++ F R S L GL + G+ + ++ + G
Sbjct: 497 ---LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG------------------ 535
Query: 265 AQCAFDQMPEKTTVGWNSIIAGYALHGYSEEALSIYLEMRDSGAKIDHFTISIVIRICVR 324
C D+ V +N++I+G +EA EM G K D++T SI+I
Sbjct: 536 --CVMDR------VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 325 LASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARHVFDRMHRKNV----IS 380
+ +E A Q R+G D+ + ++D K R E+ + FD M KNV +
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 381 WNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 440
+N LI Y G+ A+++ E M + + PN T+ +++ S E +F M
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM- 706
Query: 441 RDHKVKPRAMHYACMIELLGREGLLDEAFALIRRAPFEPTKNMWVALLTACRMHGNLELG 500
R ++P HY +I+ G+ G + + L+R MH
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR------------------EMHSK---- 744
Query: 501 KFAAEKLYEMDPGKLCNYVMLLNIYNSSGKLKEAAGVLQTLKRKGL 546
+ P K+ Y +++ Y G + EA+ +L ++ KG+
Sbjct: 745 --------NVHPNKI-TYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 126/292 (43%), Gaps = 12/292 (4%)
Query: 137 ISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGDY 192
++ GF D N +L + G + +A ++ ++ R D VS+ T+I G
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 193 SEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACAL 252
EAF M + T++ ++ + ++ Q + G+ D + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 253 IDMYSKCGSIEDAQCAFDQMPEKT----TVGWNSIIAGYALHGYSEEALSIYLEMRDSGA 308
ID K E+ Q FD+M K TV +N +I Y G AL + +M+ G
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 309 KIDHFTISIVIRICVRLASLEHAKQAHAALVRHGFGSDIVANTALVDFYSKWGRMEDARH 368
+ T + +I+ ++ +E AK + G ++ TAL+D Y K G+M
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 369 VFDRMHRKNV----ISWNALIAGYGNHGQGEQAIQMFEQMLRERVIPNHVTF 416
+ MH KNV I++ +I GY G +A ++ +M + ++P+ +T+
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/499 (21%), Positives = 193/499 (38%), Gaps = 91/499 (18%)
Query: 136 MISSGFEPDLYMMNRVLLMHVKCGLMLDARKLFGDMPER----DVVSWMTVIGGLVDSGD 191
++ G PD+Y+ + K G + +A KLF M E +VV++ TVI GL G
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 192 YSEAFGLFLFMWVEFNDGRSRTFATMVRASAGLGLIQVGRQIHSCALKMGVGGDSFVACA 251
Y EAF M + T++ +V+ I + K G + V
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 252 LIDMYSKCGSIEDAQCAFDQMPEK----TTVGWNSIIAGYALHGYSEEALSIYLEMRDSG 307
LID + + GS+ A D M K T+ +N++I GY +G ++ A + EM G
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 308 AKIDH--FTISIVIRICVRL-----------------------------ASLEHAKQAHA 336
++ FT S++ +C L +H K + A
Sbjct: 431 FNVNQGSFT-SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 337 -----ALVRHGFGSDIVANTALVDFYSKWGRMEDARH----------VFDRMHRKNVIS- 380
+ GF D + AL+ + G++++A V DR+ +IS
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 381 ----------------------------WNALIAGYGNHGQGEQAIQMFEQMLRERVIPN 412
++ LI G N + E+AIQ ++ R ++P+
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 413 HVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL- 471
T+ ++ C + +E G E F M + V+P + Y +I R G L A L
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKN-VQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 472 --IRRAPFEPTKNMWVALLTACRMHGNLELGK--FAAEKLYEMDPGKLCNYVMLLNIYNS 527
++ P + +L+ + +E K F ++ ++P + +Y L++ Y
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN-VFHYTALIDGYGK 727
Query: 528 SGKLKEAAGVLQTLKRKGL 546
G++ + +L+ + K +
Sbjct: 728 LGQMVKVECLLREMHSKNV 746