Miyakogusa Predicted Gene
- Lj0g3v0322669.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0322669.1 tr|Q6Z235|Q6Z235_ORYSJ Pentatricopeptide (PPR)
repeat-containing protein-like OS=Oryza sativa
subsp.,53.01,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptid,CUFF.21897.1
(157 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 193 4e-50
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 1e-41
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 3e-39
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 6e-39
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 151 1e-37
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 138 1e-33
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 136 5e-33
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 8e-31
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-30
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-30
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-29
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-28
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 9e-28
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-27
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 1e-24
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-24
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 9e-24
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 3e-23
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-22
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-22
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 7e-22
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 98 3e-21
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-21
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 6e-21
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-20
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-20
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 92 1e-19
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-19
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-19
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-19
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 91 4e-19
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-19
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 90 5e-19
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-18
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 89 1e-18
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-18
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 89 2e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 3e-18
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-18
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-18
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-18
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-18
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-18
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 6e-18
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 86 9e-18
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-17
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-17
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-17
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-17
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-17
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-17
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-17
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-17
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 83 8e-17
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 8e-17
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-16
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-16
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-16
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 81 4e-16
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 8e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 8e-16
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-15
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-15
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-15
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-15
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-15
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-15
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-15
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-15
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 79 2e-15
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 79 2e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-15
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-15
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-15
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-15
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-15
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-15
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-15
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 77 4e-15
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-15
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 5e-15
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 5e-15
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-15
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-15
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 7e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 7e-15
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-15
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-15
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-15
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 76 9e-15
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-15
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 76 1e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 1e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-14
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-14
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-14
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 75 2e-14
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-14
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-14
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 74 4e-14
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 74 4e-14
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 74 5e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 6e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-14
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 9e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 9e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-13
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-13
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-13
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-13
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-13
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-13
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 71 2e-13
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 4e-13
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-13
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-13
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-13
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-13
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-13
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-13
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-13
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-13
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-13
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 70 7e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-13
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-13
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-12
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-12
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-12
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-12
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 3e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 68 3e-12
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-12
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-12
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-12
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-12
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 67 4e-12
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 67 5e-12
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-12
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 67 6e-12
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-12
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 67 6e-12
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-12
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-12
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-12
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-12
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-11
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 66 1e-11
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-11
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 65 2e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-11
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-11
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-11
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 64 3e-11
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-11
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-11
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 64 4e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-11
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 64 5e-11
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-11
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 6e-11
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 6e-11
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-11
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-11
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 63 7e-11
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-11
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 9e-11
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 63 1e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 62 1e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-10
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-10
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-10
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-10
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 61 4e-10
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-10
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 4e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 4e-10
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 61 4e-10
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-10
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 60 4e-10
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-10
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-10
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 8e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-10
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 9e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 9e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 9e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-09
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 3e-09
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-09
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 56 8e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-09
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 56 9e-09
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 54 3e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-08
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 54 4e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 54 5e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 53 7e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-08
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-08
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-07
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 52 2e-07
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 52 2e-07
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 51 3e-07
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 3e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-07
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 3e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-07
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 51 3e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-07
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 50 5e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 50 9e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 1e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-06
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-06
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 2e-06
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 48 2e-06
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 2e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 3e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 47 6e-06
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 193 bits (490), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/157 (58%), Positives = 113/157 (71%), Gaps = 1/157 (0%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
+LF+VMP RNIVTCNAML+GY++ ++EA F MP +NVVSWT ML D GR ED
Sbjct: 98 VLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSED 156
Query: 61 ARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
A +FD MPE+NVVSWN +V GL+RNG +E A+ VF+ P R VVSWN MI GY EN M
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGM 216
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+EA+ LF M +NV+TWTSM+ GYCR G+V AY L
Sbjct: 217 EEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRL 253
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 87/130 (66%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP RN+V+ N +++G +++G +++A+ F++MP R+VVSW AM+ GY + +E+A
Sbjct: 160 LFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEA 219
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
+ +F M EKNVV+W +MV G R G + A +F + P R +VSW MI+G+A N
Sbjct: 220 KLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYR 279
Query: 122 EARALFDQME 131
EA LF +M+
Sbjct: 280 EALMLFLEMK 289
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 49/204 (24%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
+LF M +N+VT +M+ GY + G + EA F MPERN+VSWTAM+ G+A +
Sbjct: 221 LLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYRE 280
Query: 61 ARRVFDVMPE---------KNVVSWNAMVGGL---------------------------- 83
A +F M + + ++S GGL
Sbjct: 281 ALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGR 340
Query: 84 ---------VRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME-FR 133
+G + A+ + ++ + S N++I Y +NG ++ A LF++++
Sbjct: 341 LAKSLVHMYASSGLIASAQSLLNES--FDLQSCNIIINRYLKNGDLERAETLFERVKSLH 398
Query: 134 NVITWTSMISGYCRAGNVEAAYGL 157
+ ++WTSMI GY AG+V A+GL
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGL 422
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 42/190 (22%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPE-RNVVSWTAMLGGYADAGRVEDARRVFDVM 68
++ +CN +++ YL++G L+ A FE + + VSWT+M+ GY +AG V A +F +
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 69 PEKNVVSWNAMVGGLVRNGGL-EGARMVFEQTPC-------------------------- 101
+K+ V+W M+ GLV+N E A ++ + C
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Query: 102 -------RTVVSW-------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCR 147
+T + N +++ YA+ GA+++A +F +M ++ ++W SMI G
Sbjct: 487 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSH 546
Query: 148 AGNVEAAYGL 157
G + A L
Sbjct: 547 HGLADKALNL 556
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 78 AMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAMDEARALFDQMEFR 133
A++ + GGL AR + ++ P R VV W +++ YA+ G +DEAR LF+ M R
Sbjct: 47 ALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 106
Query: 134 NVITWTSMISGYCRAGNVEAAYGL 157
N++T +M++GY + + A+ L
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTL 130
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 46/194 (23%)
Query: 2 LFD-VMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGG------YAD 54
LF+ V + V+ +M+ GYL++G + A F+ + +++ V+WT M+ G +A+
Sbjct: 390 LFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAE 449
Query: 55 AG-----------------------------RVEDARRVFDVMP------EKNVVSWNAM 79
A ++ + + V+ + +++ N++
Sbjct: 450 AASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSL 509
Query: 80 VGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM----EFRNV 135
V + G +E A +F + + VSWN MI G + +G D+A LF +M + N
Sbjct: 510 VSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNS 569
Query: 136 ITWTSMISGYCRAG 149
+T+ ++S +G
Sbjct: 570 VTFLGVLSACSHSG 583
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 165 bits (418), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 108/157 (68%), Gaps = 1/157 (0%)
Query: 2 LFD-VMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
LFD V +N+VT AM+SGYL+S L A F+ MPERNVVSW M+ GYA +GR++
Sbjct: 99 LFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDK 158
Query: 61 ARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
A +FD MPE+N+VSWN+MV LV+ G ++ A +FE+ P R VVSW M+ G A+NG +
Sbjct: 159 ALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKV 218
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
DEAR LFD M RN+I+W +MI+GY + ++ A L
Sbjct: 219 DEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQL 255
Score = 164 bits (416), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 105/156 (67%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP RNIV+ N+M+ +Q G +DEA FE MP R+VVSWTAM+ G A G+V++A
Sbjct: 162 LFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEA 221
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
RR+FD MPE+N++SWNAM+ G +N ++ A +F+ P R SWN MI G+ N M+
Sbjct: 222 RRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMN 281
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+A LFD+M +NVI+WT+MI+GY E A +
Sbjct: 282 KACGLFDRMPEKNVISWTTMITGYVENKENEEALNV 317
Score = 161 bits (407), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 104/157 (66%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
MLF MP RN+V+ N M+ GY QSG +D+A F+ MPERN+VSW +M+ GR+++
Sbjct: 130 MLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDE 189
Query: 61 ARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
A +F+ MP ++VVSW AMV GL +NG ++ AR +F+ P R ++SWN MI GYA+N +
Sbjct: 190 AMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRI 249
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
DEA LF M R+ +W +MI+G+ R + A GL
Sbjct: 250 DEADQLFQVMPERDFASWNTMITGFIRNREMNKACGL 286
Score = 132 bits (333), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LF+ MP R++V+ AM+ G ++G +DEAR F+ MPERN++SW AM+ GYA R+++A
Sbjct: 193 LFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEA 252
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
++F VMPE++ SWN M+ G +RN + A +F++ P + V+SW MI GY EN +
Sbjct: 253 DQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENE 312
Query: 122 EARALFDQMEFR------NVITWTSMISG 144
EA +F +M R NV T+ S++S
Sbjct: 313 EALNVFSKM-LRDGSVKPNVGTYVSILSA 340
Score = 130 bits (326), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 89/134 (66%), Gaps = 1/134 (0%)
Query: 25 GMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFD-VMPEKNVVSWNAMVGGL 83
G + EAR F+ +PER+VV+WT ++ GY G + +AR +FD V KNVV+W AMV G
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 84 VRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMIS 143
+R+ L A M+F++ P R VVSWN MI GYA++G +D+A LFD+M RN+++W SM+
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 144 GYCRAGNVEAAYGL 157
+ G ++ A L
Sbjct: 180 ALVQRGRIDEAMNL 193
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 42/195 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP RNI++ NAM++GY Q+ +DEA F+ MPER+ SW M+ G+ + A
Sbjct: 224 LFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKA 283
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVF------------------------- 96
+FD MPEKNV+SW M+ G V N E A VF
Sbjct: 284 CGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 97 ----------EQTPCRTVVSWNVMIAG-----YAENGAMDEARALFDQ--MEFRNVITWT 139
Q ++V N ++ Y+++G + AR +FD + R++I+W
Sbjct: 344 LAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 140 SMISGYCRAGNVEAA 154
SMI+ Y G+ + A
Sbjct: 404 SMIAVYAHHGHGKEA 418
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 46/197 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LF VMP R+ + N M++G++++ +++A F+ MPE+NV+SWT M+ GY + E+A
Sbjct: 255 LFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEA 314
Query: 62 RRVFDVM----------------------------------------PEKNVVSWNAMVG 81
VF M +KN + +A++
Sbjct: 315 LNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLN 374
Query: 82 GLVRNGGLEGARMVFEQ-TPC-RTVVSWNVMIAGYAENGAMDEARALFDQME---FR-NV 135
++G L AR +F+ C R ++SWN MIA YA +G EA +++QM F+ +
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
Query: 136 ITWTSMISGYCRAGNVE 152
+T+ +++ AG VE
Sbjct: 435 VTYLNLLFACSHAGLVE 451
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 79 MVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR-NVIT 137
++G L + G + AR +F+ P R VV+W +I GY + G M EAR LFD+++ R NV+T
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 138 WTSMISGYCRAGNVEAA 154
WT+M+SGY R+ + A
Sbjct: 112 WTAMVSGYLRSKQLSIA 128
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 157 bits (397), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 105/153 (68%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+F++MP RN+V+ AM+ GY+Q GM+ EA F MPERN VSWT M GG D GR++ A
Sbjct: 101 VFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKA 160
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
R+++D+MP K+VV+ M+GGL R G ++ AR++F++ R VV+W MI GY +N +D
Sbjct: 161 RKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVD 220
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
AR LF+ M + ++WTSM+ GY +G +E A
Sbjct: 221 VARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDA 253
Score = 154 bits (388), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 105/156 (67%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD M RN+V+ N ++SGY+++ M+ EAR FE MPERNVVSWTAM+ GY G V +A
Sbjct: 70 LFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEA 129
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
+F MPE+N VSW M GGL+ +G ++ AR +++ P + VV+ MI G G +D
Sbjct: 130 ESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVD 189
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
EAR +FD+M RNV+TWT+MI+GY + V+ A L
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKL 225
Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 93/148 (62%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
L+D+MP +++V M+ G + G +DEAR F+ M ERNVV+WT M+ GY RV+ A
Sbjct: 163 LYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVA 222
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
R++F+VMPEK VSW +M+ G +G +E A FE P + V++ N MI G+ E G +
Sbjct: 223 RKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEIS 282
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAG 149
+AR +FD ME R+ TW MI Y R G
Sbjct: 283 KARRVFDLMEDRDNATWRGMIKAYERKG 310
Score = 135 bits (341), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 97/153 (63%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
FD + + I + N+++SGY +G+ EAR F+ M ERNVVSW ++ GY + +A
Sbjct: 39 FFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEA 98
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
R VF++MPE+NVVSW AMV G ++ G + A +F + P R VSW VM G ++G +D
Sbjct: 99 RNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRID 158
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+AR L+D M ++V+ T+MI G CR G V+ A
Sbjct: 159 KARKLYDMMPVKDVVASTNMIGGLCREGRVDEA 191
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 89/146 (60%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK 71
V C+ +S + G ++EAR FF+S+ + + SW +++ GY G ++AR++FD M E+
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER 77
Query: 72 NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME 131
NVVSWN +V G ++N + AR VFE P R VVSW M+ GY + G + EA +LF +M
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 132 FRNVITWTSMISGYCRAGNVEAAYGL 157
RN ++WT M G G ++ A L
Sbjct: 138 ERNEVSWTVMFGGLIDDGRIDKARKL 163
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 86/144 (59%), Gaps = 1/144 (0%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
++FD M RN+VT M++GY Q+ +D AR FE MPE+ VSWT+ML GY +GR+ED
Sbjct: 193 LIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIED 252
Query: 61 ARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
A F+VMP K V++ NAM+ G G + AR VF+ R +W MI Y G
Sbjct: 253 AEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFE 312
Query: 121 DEARALFDQMEFRNV-ITWTSMIS 143
EA LF QM+ + V ++ S+IS
Sbjct: 313 LEALDLFAQMQKQGVRPSFPSLIS 336
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 8 HRNIVTC---------NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRV 58
H ++V C + +++ Y++ G L +A+ F+ ++++ W +++ GYA G
Sbjct: 354 HAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLG 413
Query: 59 EDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR-----TVVSWNV 109
E+A ++F MP N V+ A++ G LE +FE + TV ++
Sbjct: 414 EEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 110 MIAGYAENGAMDEARALFDQMEFR-NVITWTSMISGYCRA 148
+ G +D+A L + M + + W +++ G C+
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIKPDATVWGALL-GACKT 512
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 156 bits (394), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 104/149 (69%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
FD M R++V+ N +++GY QSG +DEAR F+ P ++V +WTAM+ GY VE+A
Sbjct: 241 FFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEA 300
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
R +FD MPE+N VSWNAM+ G V+ +E A+ +F+ PCR V +WN MI GYA+ G +
Sbjct: 301 RELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKIS 360
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGN 150
EA+ LFD+M R+ ++W +MI+GY ++G+
Sbjct: 361 EAKNLFDKMPKRDPVSWAAMIAGYSQSGH 389
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 104/156 (66%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP R++V+ N M+ GY+++ L +AR FE MPER+V SW ML GYA G V+DA
Sbjct: 117 LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
R VFD MPEKN VSWNA++ V+N +E A M+F+ +VSWN ++ G+ + +
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIV 236
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
EAR FD M R+V++W ++I+GY ++G ++ A L
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQL 272
Score = 141 bits (356), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 103/157 (65%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
MLF + +V+ N +L G+++ + EAR FF+SM R+VVSW ++ GYA +G++++
Sbjct: 209 MLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDE 268
Query: 61 ARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
AR++FD P ++V +W AMV G ++N +E AR +F++ P R VSWN M+AGY + M
Sbjct: 269 ARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERM 328
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ A+ LFD M RNV TW +MI+GY + G + A L
Sbjct: 329 EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 31/187 (16%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTA-------------- 47
LF++MP R++ + N MLSGY Q+G +D+AR F+ MPE+N VSW A
Sbjct: 148 LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEA 207
Query: 48 -----------------MLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLE 90
+LGG+ ++ +AR+ FD M ++VVSWN ++ G ++G ++
Sbjct: 208 CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKID 267
Query: 91 GARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGN 150
AR +F+++P + V +W M++GY +N ++EAR LFD+M RN ++W +M++GY +
Sbjct: 268 EARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGER 327
Query: 151 VEAAYGL 157
+E A L
Sbjct: 328 MEMAKEL 334
Score = 132 bits (333), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 95/145 (65%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+I N +S Y+++G +EA F+ MP + VS+ M+ GY G E AR++FD MP
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
E+++VSWN M+ G VRN L AR +FE P R V SWN M++GYA+NG +D+AR++FD+
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 130 MEFRNVITWTSMISGYCRAGNVEAA 154
M +N ++W +++S Y + +E A
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEA 207
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 88/130 (67%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD P +++ T AM+SGY+Q+ M++EAR F+ MPERN VSW AML GY R+E A
Sbjct: 272 LFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMA 331
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
+ +FDVMP +NV +WN M+ G + G + A+ +F++ P R VSW MIAGY+++G
Sbjct: 332 KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 122 EARALFDQME 131
EA LF QME
Sbjct: 392 EALRLFVQME 401
Score = 102 bits (255), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 71/116 (61%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ 98
+ ++ W + Y GR +A RVF MP + VS+N M+ G +RNG E AR +F++
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 99 TPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
P R +VSWNVMI GY N + +AR LF+ M R+V +W +M+SGY + G V+ A
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 176
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
NA+L Y + G ++EA F+ M +++VSW M+ GY+ G E A R F+ M + +
Sbjct: 448 NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLK 507
Query: 75 SWNAMV---------GGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARA 125
+A + GLV G M + + M+ G +++A
Sbjct: 508 PDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHN 567
Query: 126 LFDQMEFR-NVITWTSMISGYCRAGNVEAA 154
L M F + W +++ GN E A
Sbjct: 568 LMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 151 bits (382), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 106/153 (69%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP RNI++ N ++SGY+++G +DEAR F+ MPERNVVSWTA++ GY G+V+ A
Sbjct: 70 LFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVA 129
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
+F MPEKN VSW M+ G +++G ++ A ++E P + ++ MI G + G +D
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVD 189
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
EAR +FD+M R+VITWT+M++GY + V+ A
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDA 222
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 106/156 (67%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD+MP RN+V+ A++ GY+ +G +D A F MPE+N VSWT ML G+ GR++DA
Sbjct: 101 VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA 160
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
++++++P+K+ ++ +M+ GL + G ++ AR +F++ R+V++W M+ GY +N +D
Sbjct: 161 CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVD 220
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+AR +FD M + ++WTSM+ GY + G +E A L
Sbjct: 221 DARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL 256
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 102/153 (66%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD ++I + N+M++GY + M +AR F+ MP+RN++SW ++ GY G +++A
Sbjct: 39 LFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEA 98
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
R+VFD+MPE+NVVSW A+V G V NG ++ A +F + P + VSW VM+ G+ ++G +D
Sbjct: 99 RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRID 158
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+A L++ + ++ I TSMI G C+ G V+ A
Sbjct: 159 DACKLYEMIPDKDNIARTSMIHGLCKEGRVDEA 191
Score = 137 bits (344), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 98/148 (66%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
L++++P ++ + +M+ G + G +DEAR F+ M ER+V++WT M+ GY RV+DA
Sbjct: 163 LYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDA 222
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
R++FDVMPEK VSW +M+ G V+NG +E A +FE P + V++ N MI+G + G +
Sbjct: 223 RKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIA 282
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAG 149
+AR +FD M+ RN +W ++I + R G
Sbjct: 283 KARRVFDSMKERNDASWQTVIKIHERNG 310
Score = 122 bits (306), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 90/145 (62%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKN 72
T N ++ + G + EAR F+S +++ SW +M+ GY DAR++FD MP++N
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 73 VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEF 132
++SWN +V G ++NG ++ AR VF+ P R VVSW ++ GY NG +D A +LF +M
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 133 RNVITWTSMISGYCRAGNVEAAYGL 157
+N ++WT M+ G+ + G ++ A L
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKL 163
Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD M R+++T M++GY Q+ +D+AR F+ MPE+ VSWT+ML GY GR+EDA
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDA 253
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
+F+VMP K V++ NAM+ GL + G + AR VF+ R SW +I + NG
Sbjct: 254 EELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFEL 313
Query: 122 EARALFDQMEFRNV-ITWTSMIS 143
EA LF M+ + V T+ ++IS
Sbjct: 314 EALDLFILMQKQGVRPTFPTLIS 336
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 39/192 (20%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FDVMP + V+ +ML GY+Q+G +++A FE MP + V++ AM+ G G + A
Sbjct: 225 IFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKA 284
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNG------------GLEGARMVFEQ-----TPCRTV 104
RRVFD M E+N SW ++ RNG +G R F + C ++
Sbjct: 285 RRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASL 344
Query: 105 VSWN----------------------VMIAGYAENGAMDEARALFDQMEFRNVITWTSMI 142
S + V++ Y + G + +++ +FD+ +++I W S+I
Sbjct: 345 ASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII 404
Query: 143 SGYCRAGNVEAA 154
SGY G E A
Sbjct: 405 SGYASHGLGEEA 416
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDAR 62
FDV ++ + +++ Y++ G L +++ F+ P ++++ W +++ GYA G E+A
Sbjct: 362 FDV----DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 63 RVFDVMP-----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYA-- 115
+VF MP + N V++ A + G +E ++E +V + A YA
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM--ESVFGVKPITAHYACM 475
Query: 116 -----ENGAMDEARALFDQMEFR-NVITWTSMISGYCRA 148
G +EA + D M + W S++ G CR
Sbjct: 476 VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL-GACRT 513
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 138 bits (348), Expect = 1e-33, Method: Composition-based stats.
Identities = 63/149 (42%), Positives = 102/149 (68%), Gaps = 3/149 (2%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE--RNVVSWTAMLGGYADAGR-V 58
+FD MP R+ V+ N+M+ GY++ G++ AR F+ MP +N++SW +M+ GYA V
Sbjct: 178 MFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGV 237
Query: 59 EDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENG 118
+ A ++F MPEK+++SWN+M+ G V++G +E A+ +F+ P R VV+W MI GYA+ G
Sbjct: 238 DIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLG 297
Query: 119 AMDEARALFDQMEFRNVITWTSMISGYCR 147
+ A+ LFDQM R+V+ + SM++GY +
Sbjct: 298 FVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 326
Score = 125 bits (314), Expect = 1e-29, Method: Composition-based stats.
Identities = 58/133 (43%), Positives = 89/133 (66%), Gaps = 3/133 (2%)
Query: 2 LFDVMPH--RNIVTCNAMLSGYLQ-SGMLDEARWFFESMPERNVVSWTAMLGGYADAGRV 58
LFD+MP +N+++ N+M+SGY Q S +D A F MPE++++SW +M+ GY GR+
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 268
Query: 59 EDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENG 118
EDA+ +FDVMP ++VV+W M+ G + G + A+ +F+Q P R VV++N M+AGY +N
Sbjct: 269 EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK 328
Query: 119 AMDEARALFDQME 131
EA +F ME
Sbjct: 329 YHMEALEIFSDME 341
Score = 124 bits (310), Expect = 3e-29, Method: Composition-based stats.
Identities = 58/146 (39%), Positives = 92/146 (63%), Gaps = 3/146 (2%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE--KN 72
N ++ YL+ G L +R F+ MP+R+ VS+ +M+ GY G + AR +FD+MP KN
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 73 VVSWNAMVGGLVRNG-GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME 131
++SWN+M+ G + G++ A +F P + ++SWN MI GY ++G +++A+ LFD M
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP 279
Query: 132 FRNVITWTSMISGYCRAGNVEAAYGL 157
R+V+TW +MI GY + G V A L
Sbjct: 280 RRDVVTWATMIDGYAKLGFVHHAKTL 305
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 40/170 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFDVMP R++VT M+ GY + G + A+ F+ MP R+VV++ +M+ GY +A
Sbjct: 274 LFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEA 333
Query: 62 RRVFDVMPEKN-------------------------------VVSWNAMVGGLV------ 84
+F M +++ +V +GG +
Sbjct: 334 LEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALID 393
Query: 85 ---RNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME 131
+ G ++ A +VFE +++ WN MI G A +G + A + Q+E
Sbjct: 394 MYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIE 443
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 95/143 (66%), Gaps = 3/143 (2%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N L+ ++SG + EAR FE + RN V+W M+ GY + AR++FDVMP+++VV
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 75 SWNAMVGGLVRNGG---LEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME 131
+WN M+ G V GG LE AR +F++ P R SWN MI+GYA+N + EA LF++M
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 132 FRNVITWTSMISGYCRAGNVEAA 154
RN ++W++MI+G+C+ G V++A
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSA 186
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 55/208 (26%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSG---MLDEARWFFESMPERNVVSWTAMLGGYADAGRV 58
LFDVMP R++VT N M+SGY+ G L+EAR F+ MP R+ SW M+ GYA R+
Sbjct: 93 LFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRI 152
Query: 59 EDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT--------------- 103
+A +F+ MPE+N VSW+AM+ G +NG ++ A ++F + P +
Sbjct: 153 GEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNE 212
Query: 104 ----------------------VVSWNVMIAGYAENGAMDEARALFDQM----------E 131
V ++N +I GY + G ++ AR LFDQ+ E
Sbjct: 213 RLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGE 272
Query: 132 FR-----NVITWTSMISGYCRAGNVEAA 154
FR NV++W SMI Y + G+V +A
Sbjct: 273 FRERFCKNVVSWNSMIKAYLKVGDVVSA 300
Score = 122 bits (307), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 99/208 (47%), Gaps = 52/208 (25%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP R+ + N M+SGY ++ + EA FE MPERN VSW+AM+ G+ G V+ A
Sbjct: 127 LFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSA 186
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRN----------------------------------- 86
+F MP K+ A+V GL++N
Sbjct: 187 VVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYG 246
Query: 87 --GGLEGARMVFEQTP---------------CRTVVSWNVMIAGYAENGAMDEARALFDQ 129
G +E AR +F+Q P C+ VVSWN MI Y + G + AR LFDQ
Sbjct: 247 QRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQ 306
Query: 130 MEFRNVITWTSMISGYCRAGNVEAAYGL 157
M+ R+ I+W +MI GY +E A+ L
Sbjct: 307 MKDRDTISWNTMIDGYVHVSRMEDAFAL 334
Score = 122 bits (307), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 99/160 (61%), Gaps = 4/160 (2%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRV--- 58
+F+ + RN VT N M+SGY++ +++AR F+ MP+R+VV+W M+ GY G +
Sbjct: 62 IFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFL 121
Query: 59 EDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENG 118
E+AR++FD MP ++ SWN M+ G +N + A ++FE+ P R VSW+ MI G+ +NG
Sbjct: 122 EEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNG 181
Query: 119 AMDEARALFDQMEFRNVITWTSMISGYCRAGNV-EAAYGL 157
+D A LF +M ++ ++++G + + EAA+ L
Sbjct: 182 EVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVL 221
Score = 113 bits (283), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 52/206 (25%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN------------------- 41
+LF+ MP RN V+ +AM++G+ Q+G +D A F MP ++
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSE 216
Query: 42 ------------------VVSWTAMLGGYADAGRVEDARRVFDVMPE------------- 70
V ++ ++ GY G+VE AR +FD +P+
Sbjct: 217 AAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRER 276
Query: 71 --KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFD 128
KNVVSWN+M+ ++ G + AR++F+Q R +SWN MI GY M++A ALF
Sbjct: 277 FCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 129 QMEFRNVITWTSMISGYCRAGNVEAA 154
+M R+ +W M+SGY GNVE A
Sbjct: 337 EMPNRDAHSWNMMVSGYASVGNVELA 362
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
+N+V+ N+M+ YL+ G + AR F+ M +R+ +SW M+ GY R+EDA +F M
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Query: 69 PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFD 128
P ++ SWN MV G G +E AR FE+TP + VSWN +IA Y +N EA LF
Sbjct: 339 PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFI 398
Query: 129 QM----EFRNVITWTSMISG 144
+M E + T TS++S
Sbjct: 399 RMNIEGEKPDPHTLTSLLSA 418
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 15/158 (9%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPE---------------RNVVSWTAMLGGYADAGRVE 59
N ++ GY Q G ++ AR F+ +P+ +NVVSW +M+ Y G V
Sbjct: 239 NTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVV 298
Query: 60 DARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA 119
AR +FD M +++ +SWN M+ G V +E A +F + P R SWN+M++GYA G
Sbjct: 299 SARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGN 358
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
++ AR F++ ++ ++W S+I+ Y + + + A L
Sbjct: 359 VELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDL 396
Score = 102 bits (255), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 91/196 (46%), Gaps = 39/196 (19%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
+LFD M R+ ++ N M+ GY+ +++A F MP R+ SW M+ GYA G VE
Sbjct: 302 LLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVEL 361
Query: 61 ARRVFDVMPEKNVVSWNAMVGGLVRNG------------GLEGAR--------------- 93
AR F+ PEK+ VSWN+++ +N +EG +
Sbjct: 362 ARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTG 421
Query: 94 -------MVFEQTPCRTVVS----WNVMIAGYAENGAMDEARALFDQMEF-RNVITWTSM 141
M Q +TV+ N +I Y+ G + E+R +FD+M+ R VITW +M
Sbjct: 422 LVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAM 481
Query: 142 ISGYCRAGNVEAAYGL 157
I GY GN A L
Sbjct: 482 IGGYAFHGNASEALNL 497
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 43/196 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LF MP+R+ + N M+SGY G ++ AR +FE PE++ VSW +++ Y ++A
Sbjct: 334 LFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEA 393
Query: 62 RRVFDVM------PEKNVVS--------------------------------WNAMVGGL 83
+F M P+ + ++ NA++
Sbjct: 394 VDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMY 453
Query: 84 VRNGGLEGARMVFEQTPC-RTVVSWNVMIAGYAENGAMDEARALFDQME----FRNVITW 138
R G + +R +F++ R V++WN MI GYA +G EA LF M+ + + IT+
Sbjct: 454 SRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITF 513
Query: 139 TSMISGYCRAGNVEAA 154
S+++ AG V+ A
Sbjct: 514 VSVLNACAHAGLVDEA 529
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 129 bits (324), Expect = 8e-31, Method: Composition-based stats.
Identities = 59/143 (41%), Positives = 91/143 (63%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+F+ +P ++ M++GY +S L +A F+ MP R+VVSW +M+ G + G + A
Sbjct: 57 VFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTA 116
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
++FD MPE++VVSW AMV G R+G ++ A +F Q P + +WN M+ GY + G +D
Sbjct: 117 VKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVD 176
Query: 122 EARALFDQMEFRNVITWTSMISG 144
+A LF QM +NVI+WT+MI G
Sbjct: 177 DALKLFKQMPGKNVISWTTMICG 199
Score = 117 bits (294), Expect = 2e-27, Method: Composition-based stats.
Identities = 60/139 (43%), Positives = 88/139 (63%), Gaps = 1/139 (0%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP R++V+ N+M+SG ++ G ++ A F+ MPER+VVSWTAM+ G +G+V+ A
Sbjct: 88 LFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQA 147
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
R+F MP K+ +WN+MV G ++ G ++ A +F+Q P + V+SW MI G +N
Sbjct: 148 ERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSG 207
Query: 122 EARALFDQMEFRNVITWTS 140
EA LF M R I TS
Sbjct: 208 EALDLFKNM-LRCCIKSTS 225
Score = 117 bits (292), Expect = 4e-27, Method: Composition-based stats.
Identities = 58/150 (38%), Positives = 88/150 (58%), Gaps = 5/150 (3%)
Query: 8 HRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDV 67
+R ++ CN +LS +DEAR F +P +V +T M+ GY + R+ DA +FD
Sbjct: 37 NREVLICNHLLSR-----RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDE 91
Query: 68 MPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALF 127
MP ++VVSWN+M+ G V G + A +F++ P R+VVSW M+ G +G +D+A LF
Sbjct: 92 MPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLF 151
Query: 128 DQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
QM ++ W SM+ GY + G V+ A L
Sbjct: 152 YQMPVKDTAAWNSMVHGYLQFGKVDDALKL 181
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 128 bits (322), Expect = 1e-30, Method: Composition-based stats.
Identities = 62/145 (42%), Positives = 89/145 (61%), Gaps = 1/145 (0%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD +P + + N MLS Y+++ ++A+ FF+ MP ++ SW M+ GYA G +E A
Sbjct: 115 LFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKA 174
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
R +F M EKN VSWNAM+ G + G LE A F+ P R VV+W MI GY + ++
Sbjct: 175 RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 122 EARALFDQMEF-RNVITWTSMISGY 145
A A+F M +N++TW +MISGY
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGY 259
Score = 111 bits (278), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/145 (37%), Positives = 86/145 (59%), Gaps = 1/145 (0%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYA-DAGRVEDARRVFDVMP 69
I N +++ ++SG +D A F M +N ++W ++L G + D R+ +A ++FD +P
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
E + S+N M+ VRN E A+ F++ P + SWN MI GYA G M++AR LF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 130 MEFRNVITWTSMISGYCRAGNVEAA 154
M +N ++W +MISGY G++E A
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKA 205
Score = 110 bits (274), Expect = 5e-25, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 1/157 (0%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQS-GMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
+F M +N +T N++L G + + EA F+ +PE + S+ ML Y E
Sbjct: 83 VFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEK 142
Query: 61 ARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
A+ FD MP K+ SWN M+ G R G +E AR +F + VSWN MI+GY E G +
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDL 202
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
++A F R V+ WT+MI+GY +A VE A +
Sbjct: 203 EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAM 239
Score = 109 bits (272), Expect = 1e-24, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 40/196 (20%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LF M +N V+ NAM+SGY++ G L++A FF+ P R VV+WTAM+ GY A +VE A
Sbjct: 177 LFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELA 236
Query: 62 RRVF-DVMPEKNVVSWNAMVGGLVRNG----------------------GLEGA------ 92
+F D+ KN+V+WNAM+ G V N GL A
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 93 -----------RMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSM 141
++V + T C V + +I+ Y + G + +A LF+ M+ ++V+ W +M
Sbjct: 297 LSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAM 356
Query: 142 ISGYCRAGNVEAAYGL 157
ISGY + GN + A L
Sbjct: 357 ISGYAQHGNADKALCL 372
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 48/205 (23%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER-------------------- 40
M D+ ++N+VT NAM+SGY+++ ++ F +M E
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 41 -------------------NVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
+V + T+++ Y G + DA ++F+VM +K+VV+WNAM+
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 82 GLVRNGGLEGARMVF-EQTPCRTVVSWNVMIA---GYAENGAMDEARALFDQMEFRNVIT 137
G ++G + A +F E + W +A G ++ A F+ M +
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 138 -----WTSMISGYCRAGNVEAAYGL 157
+T M+ RAG +E A L
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKL 443
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ +++S Y + G L +A FE M +++VV+W AM+ GYA G + A +F M
Sbjct: 318 DVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI 377
Query: 70 EKNV-VSWNAMVGGLV--RNGGLEGARMVFEQTPCRTVV------SWNVMIAGYAENGAM 120
+ + W V L+ + GL M + ++ R + M+ G +
Sbjct: 378 DNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKL 437
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRA-GNVEAA 154
+EA L M FR + G CR NVE A
Sbjct: 438 EEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 472
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 127 bits (320), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 94/149 (63%), Gaps = 4/149 (2%)
Query: 10 NIVTCNAMLSGYLQSGML--DEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDV 67
+I NA++ Y + G L +A FE M ER+ VSW +MLGG AG + DARR+FD
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDE 210
Query: 68 MPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALF 127
MP+++++SWN M+ G R + A +FE+ P R VSW+ M+ GY++ G M+ AR +F
Sbjct: 211 MPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 128 DQMEF--RNVITWTSMISGYCRAGNVEAA 154
D+M +NV+TWT +I+GY G ++ A
Sbjct: 271 DKMPLPAKNVVTWTIIIAGYAEKGLLKEA 299
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LF+ M R+ V+ N+ML G +++G L +AR F+ MP+R+++SW ML GYA + A
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKA 235
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ--TPCRTVVSWNVMIAGYAENGA 119
+F+ MPE+N VSW+ MV G + G +E AR++F++ P + VV+W ++IAGYAE G
Sbjct: 236 FELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGL 295
Query: 120 MDEARALFDQM 130
+ EA L DQM
Sbjct: 296 LKEADRLVDQM 306
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 45/196 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP--ERNVVSWTAMLGGYADAGRVE 59
LF+ MP RN V+ + M+ GY ++G ++ AR F+ MP +NVV+WT ++ GYA+ G ++
Sbjct: 238 LFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLK 297
Query: 60 DARRVFDVM-------------------PEKNVVSW--------------------NAMV 80
+A R+ D M E ++S NA++
Sbjct: 298 EADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALL 357
Query: 81 GGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----I 136
+ G L+ A VF P + +VSWN M+ G +G EA LF +M + +
Sbjct: 358 DMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKV 417
Query: 137 TWTSMISGYCRAGNVE 152
T+ +++ AG ++
Sbjct: 418 TFIAVLCSCNHAGLID 433
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 10/166 (6%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGR 57
+F+ + N+ CN+++ + Q+ +A + F M + ++ +L +
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSW 132
Query: 58 VEDARRVFDVMPE----KNVVSWNAMVGGLVRNGGL--EGARMVFEQTPCRTVVSWNVMI 111
+ + + + + + ++ NA++ R GGL A +FE+ R VSWN M+
Sbjct: 133 LPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSML 192
Query: 112 AGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
G + G + +AR LFD+M R++I+W +M+ GY R + A+ L
Sbjct: 193 GGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFEL 238
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 94/147 (63%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
+++V + + Y + L AR F MPERN VSWTA++ Y +G +E+A+ +FD+M
Sbjct: 143 KDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLM 202
Query: 69 PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFD 128
PE+N+ SWNA+V GLV++G L A+ +F++ P R ++S+ MI GYA+ G M AR LF+
Sbjct: 203 PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFE 262
Query: 129 QMEFRNVITWTSMISGYCRAGNVEAAY 155
+ +V W+++I GY + G A+
Sbjct: 263 EARGVDVRAWSALILGYAQNGQPNEAF 289
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 89/134 (66%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+F MP RN V+ A++ Y++SG L+EA+ F+ MPERN+ SW A++ G +G + +A
Sbjct: 167 VFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNA 226
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
+++FD MP+++++S+ +M+ G + G + AR +FE+ V +W+ +I GYA+NG +
Sbjct: 227 KKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPN 286
Query: 122 EARALFDQMEFRNV 135
EA +F +M +NV
Sbjct: 287 EAFKVFSEMCAKNV 300
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 76/119 (63%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ 98
+++VV T+ + Y + AR+VF MPE+N VSW A+V V++G LE A+ +F+
Sbjct: 142 DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDL 201
Query: 99 TPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
P R + SWN ++ G ++G + A+ LFD+M R++I++TSMI GY + G++ +A L
Sbjct: 202 MPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDL 260
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP R+I++ +M+ GY + G + AR FE +V +W+A++ GYA G+ +A
Sbjct: 229 LFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEA 288
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGY------- 114
+VF M KNV ++ GL+ G + E+ N + Y
Sbjct: 289 FKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALID 348
Query: 115 --AENGAMDEARALFDQMEFRNVITWTSMISG 144
A+ G MD A LF++M R+++++ SM+ G
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEG 380
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 122 bits (305), Expect = 1e-28, Method: Composition-based stats.
Identities = 52/134 (38%), Positives = 85/134 (63%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMV 80
Y + G ++ A+ F+ + E+N VSW ++L GY ++G +++ARRVFD +PEK+ VSWN ++
Sbjct: 149 YSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLII 208
Query: 81 GGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTS 140
+ G + A +F P ++ SWN++I GY M AR FD M +N ++W +
Sbjct: 209 SSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWIT 268
Query: 141 MISGYCRAGNVEAA 154
MISGY + G+V++A
Sbjct: 269 MISGYTKLGDVQSA 282
Score = 117 bits (294), Expect = 3e-27, Method: Composition-based stats.
Identities = 58/155 (37%), Positives = 91/155 (58%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDAR 62
FD + +N V+ N++L GYL+SG LDEAR F+ +PE++ VSW ++ YA G + +A
Sbjct: 162 FDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNAC 221
Query: 63 RVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDE 122
+F MP K+ SWN ++GG V ++ AR F+ P + VSW MI+GY + G +
Sbjct: 222 SLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQS 281
Query: 123 ARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
A LF M ++ + + +MI+ Y + G + A L
Sbjct: 282 AEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKL 316
Score = 92.4 bits (228), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 46 TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV 105
T ++G Y+ G +E A++ FD + EKN VSWN+++ G + +G L+ AR VF++ P + V
Sbjct: 143 TGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAV 202
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGY--CRAGNVEAAY 155
SWN++I+ YA+ G M A +LF M ++ +W +I GY CR + Y
Sbjct: 203 SWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTY 254
Score = 71.2 bits (173), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 45/198 (22%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDAR 62
FD MP +N V+ M+SGY + G + A F M +++ + + AM+ Y G+ +DA
Sbjct: 255 FDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDAL 314
Query: 63 RVFDVMPEKN------------VVSWNAMVGG---------------------------- 82
++F M E+N VVS N+ +G
Sbjct: 315 KLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLID 374
Query: 83 -LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVIT 137
++ G A +F + VS++ MI G NG EA +LF M + NV+T
Sbjct: 375 LYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVT 434
Query: 138 WTSMISGYCRAGNVEAAY 155
+T ++S Y +G V+ Y
Sbjct: 435 FTGLLSAYSHSGLVQEGY 452
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 78 AMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVIT 137
+VG R G +E A+ F+ + VSWN ++ GY E+G +DEAR +FD++ ++ ++
Sbjct: 144 GLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVS 203
Query: 138 WTSMISGYCRAGNVEAAYGL 157
W +IS Y + G++ A L
Sbjct: 204 WNLIISSYAKKGDMGNACSL 223
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 119 bits (298), Expect = 9e-28, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE-KNVVSWNAM 79
Y + G + AR F+ MP R+ VSWTA++ GY G ++ A ++FD MP K+VV +NAM
Sbjct: 123 YAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAM 182
Query: 80 VGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWT 139
+ G V++G + AR +F++ +TV++W MI GY +D AR LFD M RN+++W
Sbjct: 183 MDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWN 242
Query: 140 SMISGYCR 147
+MI GYC+
Sbjct: 243 TMIGGYCQ 250
Score = 113 bits (282), Expect = 6e-26, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE-RNVVSWTAMLGGYADAGRVEDA 61
FD MPHR+ V+ A++SGY++ G LD A F+ MP ++VV + AM+ G+ +G + A
Sbjct: 136 FDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSA 195
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
RR+FD M K V++W M+ G ++ AR +F+ P R +VSWN MI GY +N
Sbjct: 196 RRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255
Query: 122 EARALFDQME 131
E LF +M+
Sbjct: 256 EGIRLFQEMQ 265
Score = 112 bits (280), Expect = 1e-25, Method: Composition-based stats.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 41/197 (20%)
Query: 2 LFDVMPH-RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
LFD MPH +++V NAM+ G+++SG + AR F+ M + V++WT M+ GY + ++
Sbjct: 166 LFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDA 225
Query: 61 ARRVFDVMPEKNVVSWNAMVGGLVRNGG-LEGARMVFEQTPCRTVVSWNVMIAG------ 113
AR++FD MPE+N+VSWN M+GG +N EG R+ E ++ +V I
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 114 ---------------------------------YAENGAMDEARALFDQMEFRNVITWTS 140
Y++ G +++A+ +FD+M + V +W +
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNA 345
Query: 141 MISGYCRAGNVEAAYGL 157
MI GY GN AA L
Sbjct: 346 MIHGYALNGNARAALDL 362
Score = 100 bits (248), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 46 TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTP-CRTV 104
T ++ YA G++ AR FD MP ++ VSW A++ G +R G L+ A +F+Q P + V
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV 176
Query: 105 VSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
V +N M+ G+ ++G M AR LFD+M + VITWT+MI GYC +++AA L
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKL 229
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 70/174 (40%), Gaps = 47/174 (27%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----------------------- 38
LFD MP RN+V+ N M+ GY Q+ E F+ M
Sbjct: 229 LFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTG 288
Query: 39 -----------------ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
++ V TA+L Y+ G +E A+R+FD MPEK V SWNAM+
Sbjct: 289 ALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIH 348
Query: 82 GLVRNGGLEGA-----RMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
G NG A M+ E+ P ++ +I G ++E R F M
Sbjct: 349 GYALNGNARAALDLFVTMMIEEKP--DEITMLAVITACNHGGLVEEGRKWFHVM 400
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
+ + C A+L Y + G +++A+ F+ MPE+ V SW AM+ GYA G A +F M
Sbjct: 307 KKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366
Query: 69 ---PEKNVVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAENGAMD 121
+ + ++ A++ G +E R F E + + M+ G++
Sbjct: 367 MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLK 426
Query: 122 EARALFDQMEFR-NVITWTSMISGYCRAGNVEAA 154
EA L M F N I +S +S + ++E A
Sbjct: 427 EAEDLITNMPFEPNGIILSSFLSACGQYKDIERA 460
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 78/132 (59%)
Query: 25 GMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLV 84
G++ A F M E+NVV WT+M+ GY + ARR FD+ PE+++V WN M+ G +
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 85 RNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISG 144
G + AR +F+Q PCR V+SWN ++ GYA G M+ +FD M RNV +W +I G
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 145 YCRAGNVEAAYG 156
Y + G V G
Sbjct: 162 YAQNGRVSEVLG 173
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 78/129 (60%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+F M +N+V +M++GYL + L AR +F+ PER++V W M+ GY + G + +A
Sbjct: 50 VFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEA 109
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
R +FD MP ++V+SWN ++ G G +E VF+ P R V SWN +I GYA+NG +
Sbjct: 110 RSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVS 169
Query: 122 EARALFDQM 130
E F +M
Sbjct: 170 EVLGSFKRM 178
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP R++++ N +L GY G ++ F+ MPERNV SW ++ GYA GRV +
Sbjct: 112 LFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEV 171
Query: 62 RRVFDVMPEKNVVSWNAMVGGLV-----RNGGLEGARMVFE--QTPCRTVVSWNV---MI 111
F M ++ V N LV + G + + V + +T V NV +I
Sbjct: 172 LGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALI 231
Query: 112 AGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
Y + GA++ A +F ++ R++I+W +MI+G G+ A L
Sbjct: 232 DMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNL 277
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%)
Query: 79 MVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITW 138
+ G L G + A VF + + VV W MI GY N + AR FD R+++ W
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 139 TSMISGYCRAGNVEAAYGL 157
+MISGY GN+ A L
Sbjct: 94 NTMISGYIEMGNMLEARSL 112
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 109 bits (272), Expect = 1e-24, Method: Composition-based stats.
Identities = 61/159 (38%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGM-LDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
+FD MP R + NAM++ +++ L +A F +PE+N VS+ M+ G+ AGR ++
Sbjct: 103 VFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDE 162
Query: 61 ARRVFDVMPEK--NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENG 118
A ++ P K + V+ N ++ G +R G A VF+ + VVS + M+ GY + G
Sbjct: 163 AEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMG 222
Query: 119 AMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ +AR+LFD+M RNVITWT+MI GY +AG E +GL
Sbjct: 223 RIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGL 261
Score = 90.9 bits (224), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 40/193 (20%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE------------------RNVV 43
LFD M RN++T AM+ GY ++G ++ F M + R+ V
Sbjct: 230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 44 SW----------------------TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
+ +++ Y+ G + +A+ VF VM K+ VSWN+++
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT 349
Query: 82 GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSM 141
GLV+ + A +FE+ P + +VSW MI G++ G + + LF M ++ ITWT+M
Sbjct: 350 GLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAM 409
Query: 142 ISGYCRAGNVEAA 154
IS + G E A
Sbjct: 410 ISAFVSNGYYEEA 422
Score = 87.8 bits (216), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 87/162 (53%), Gaps = 8/162 (4%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+F VM +++ V+ N++++G +Q + EA FE MP +++VSWT M+ G++ G +
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAEN 117
+F +MPEK+ ++W AM+ V NG E A F ++ C +++ +++ A
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 118 GAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAAY 155
+ E + ++ N++ S++S YC+ GN AY
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAY 493
Score = 86.7 bits (213), Expect = 6e-18, Method: Composition-based stats.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 40/190 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+F M + +V+C++M+ GY + G + +AR F+ M ERNV++WTAM+ GY AG ED
Sbjct: 199 VFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDG 258
Query: 62 RRVFDVMPEKNVVSWN--------------------AMVGGLVRNGGLE----------- 90
+F M ++ V N + + GLV LE
Sbjct: 259 FGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMS 318
Query: 91 ---------GARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSM 141
A+ VF + VSWN +I G + + EA LF++M +++++WT M
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDM 378
Query: 142 ISGYCRAGNV 151
I G+ G +
Sbjct: 379 IKGFSGKGEI 388
Score = 84.7 bits (208), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE--RNVVSWTAMLGGYADAGRVE 59
LF +P +N V+ M++G++++G DEA + + P R+ V+ +L GY AG+
Sbjct: 135 LFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWN 194
Query: 60 DARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA 119
+A RVF M K VVS ++MV G + G + AR +F++ R V++W MI GY + G
Sbjct: 195 EAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGF 254
Query: 120 MDEARALFDQM 130
++ LF +M
Sbjct: 255 FEDGFGLFLRM 265
Score = 60.1 bits (144), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 43/197 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LF+ MP +++V+ M+ G+ G + + F MPE++ ++WTAM+ + G E+A
Sbjct: 363 LFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEA 422
Query: 62 RRVFDVMPEK-----------------------------------NVVS----WNAMVGG 82
F M +K N+V+ N++V
Sbjct: 423 LCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSM 482
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITW 138
+ G A +F +VS+N MI+GY+ NG +A LF +E N +T+
Sbjct: 483 YCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTF 542
Query: 139 TSMISGYCRAGNVEAAY 155
+++S G V+ +
Sbjct: 543 LALLSACVHVGYVDLGW 559
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 94/193 (48%), Gaps = 40/193 (20%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD+MP ++V+ M++G+ + L+ AR +F+ MPE++VVSW AML GYA G EDA
Sbjct: 189 LFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDA 248
Query: 62 RRVFDVM----PEKNVVSW-----------------------------------NAMVGG 82
R+F+ M N +W A++
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 83 LVRNGGLEGARMVF-EQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSM 141
+ ++ AR +F E R +V+WN MI+GY G M AR LFD M RNV++W S+
Sbjct: 309 HAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 142 ISGYCRAGNVEAA 154
I+GY G A
Sbjct: 369 IAGYAHNGQAALA 381
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 44/198 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD + R N M+SGY + G +EA F+ MPE +VVSWT M+ G+A +E+A
Sbjct: 158 VFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENA 217
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ------TPCRTVVSWNVMIAG-- 113
R+ FD MPEK+VVSWNAM+ G +NG E A +F P T +W ++I+
Sbjct: 218 RKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNET--TWVIVISACS 275
Query: 114 ---------------------------------YAENGAMDEARALFDQM-EFRNVITWT 139
+A+ + AR +F+++ RN++TW
Sbjct: 276 FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWN 335
Query: 140 SMISGYCRAGNVEAAYGL 157
+MISGY R G++ +A L
Sbjct: 336 AMISGYTRIGDMSSARQL 353
Score = 100 bits (249), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 6/135 (4%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N ++ Y++ ++ AR F+ + +R W M+ GY G E+A ++FD+MPE +VV
Sbjct: 140 NVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVV 199
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR- 133
SW M+ G + LE AR F++ P ++VVSWN M++GYA+NG ++A LF+ M R
Sbjct: 200 SWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM-LRL 258
Query: 134 ----NVITWTSMISG 144
N TW +IS
Sbjct: 259 GVRPNETTWVIVISA 273
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 81/168 (48%), Gaps = 40/168 (23%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSW------------- 45
FD MP +++V+ NAMLSGY Q+G ++A F M N +W
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 46 ----------------------TAMLGGYADAGRVEDARRVFDVM-PEKNVVSWNAMVGG 82
TA+L +A ++ ARR+F+ + ++N+V+WNAM+ G
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISG 340
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
R G + AR +F+ P R VVSWN +IAGYA NG A F+ M
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDM 388
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
Query: 27 LDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRN 86
L E FF+ RNV+ + Y VE AR+VFD + ++ WN M+ G +
Sbjct: 126 LVEKLGFFKDPYVRNVI-----MDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKW 180
Query: 87 GGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYC 146
G E A +F+ P VVSW VMI G+A+ ++ AR FD+M ++V++W +M+SGY
Sbjct: 181 GNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYA 240
Query: 147 RAGNVEAAYGL 157
+ G E A L
Sbjct: 241 QNGFTEDALRL 251
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 44/186 (23%)
Query: 8 HRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDV 67
RN+VT NAM+SGY + G + AR F++MP+RNVVSW +++ GYA G+ A F+
Sbjct: 328 QRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFED 387
Query: 68 MPE-----------------------------------KNVVSWN-----AMVGGLVRNG 87
M + KN + N +++ R G
Sbjct: 388 MIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGG 447
Query: 88 GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMIS 143
L A+ VF++ R VVS+N + +A NG E L +M+ + +T+TS+++
Sbjct: 448 NLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLT 507
Query: 144 GYCRAG 149
RAG
Sbjct: 508 ACNRAG 513
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 105 bits (263), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 38/189 (20%)
Query: 2 LFDVMPHRNIVTCNAMLSGY-------LQSGMLDE------------------------- 29
+FD MP RN+ T NAM+ GY L SG+ +E
Sbjct: 103 VFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEK 162
Query: 30 ARWFFESMP--ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNG 87
AR FE MP +NV +W+ MLG Y + ++EDAR+ F+ +PEKN W+ M+ G R G
Sbjct: 163 ARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIG 222
Query: 88 GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMIS 143
+ AR +F + R +V WN +IAGYA+NG D+A F M+ + +T +S++S
Sbjct: 223 DVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILS 282
Query: 144 GYCRAGNVE 152
++G ++
Sbjct: 283 ACAQSGRLD 291
Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 3/151 (1%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFD-VM 68
+++ ++++S Y + G + AR F+ MPERNV +W AM+GGY G A +F+ +
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEIS 139
Query: 69 PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTP--CRTVVSWNVMIAGYAENGAMDEARAL 126
+N V+W M+ G + +E AR +FE+ P + V +W+VM+ Y N M++AR
Sbjct: 140 VCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKF 199
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
F+ + +N W+ M+SGY R G+V A +
Sbjct: 200 FEDIPEKNAFVWSLMMSGYFRIGDVHEARAI 230
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 41/183 (22%)
Query: 2 LFDVMPH--RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVE 59
LF+ MP +N+ + ML Y+ + +++AR FFE +PE+N W+ M+ GY G V
Sbjct: 166 LFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVH 225
Query: 60 DARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVF----------EQTPCRTVVS--- 106
+AR +F + +++V WN ++ G +NG + A F + +++S
Sbjct: 226 EARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACA 285
Query: 107 --------------------------WNVMIAGYAENGAMDEARALFDQMEFRNVITWTS 140
N +I YA+ G ++ A ++F+ + R+V S
Sbjct: 286 QSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNS 345
Query: 141 MIS 143
MIS
Sbjct: 346 MIS 348
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRV 64
R++V N +++GY Q+G D+A F +M E + V+ +++L A +GR++ R V
Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Query: 65 FDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
++ E N NA++ + G LE A VFE R+V N MI+ A +G
Sbjct: 297 HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKG 356
Query: 121 DEARALFDQMEFRNV----ITWTSMISGYCRAG 149
EA +F ME ++ IT+ ++++ G
Sbjct: 357 KEALEMFSTMESLDLKPDEITFIAVLTACVHGG 389
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 104 bits (259), Expect = 3e-23, Method: Composition-based stats.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 39/195 (20%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD M RN+ + N M+SGY++SGML AR F+SMPER+VVSW M+ GYA G + +A
Sbjct: 104 VFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEA 163
Query: 62 -------RRVFDVMPE--------------------------------KNVVSWNAMVGG 82
RR E NVV +++
Sbjct: 164 LWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDA 223
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMI 142
+ G +E A+ F++ + + W +I+GYA+ G M+ A LF +M +N ++WT++I
Sbjct: 224 YAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALI 283
Query: 143 SGYCRAGNVEAAYGL 157
+GY R G+ A L
Sbjct: 284 AGYVRQGSGNRALDL 298
Score = 95.5 bits (236), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 41/188 (21%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N + N ++ Y++ G +A F+ M RN+ SW M+ GY +G + AR VFD MP
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP 140
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWN--------------------- 108
E++VVSWN MV G ++G L A +++ R+ + +N
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFR-RSGIKFNEFSFAGLLTACVKSRQLQLNR 199
Query: 109 -----VMIAG--------------YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
V++AG YA+ G M+ A+ FD+M +++ WT++ISGY + G
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLG 259
Query: 150 NVEAAYGL 157
++EAA L
Sbjct: 260 DMEAAEKL 267
Score = 73.9 bits (180), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+V +++ Y + G ++ A+ F+ M +++ WT ++ GYA G +E A ++F MP
Sbjct: 213 NVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMP 272
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARA 125
EKN VSW A++ G VR G A +F + V +++ + A ++ +
Sbjct: 273 EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKE 332
Query: 126 LFDQMEFRNV----ITWTSMISGYCRAGNVEAA 154
+ M NV I +S+I Y ++G++EA+
Sbjct: 333 IHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 50/197 (25%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDAR 62
FD M ++I ++SGY + G ++ A F MPE+N VSWTA++ GY G A
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 63 RVFDVM------PEK---------------------------------NVVSWNAMVGGL 83
+F M PE+ N + ++++
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 84 VRNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAENGAMDEA-RALFDQMEFR---NV 135
++G LE + VF ++ C V WN MI+ A++G +A R L D ++FR N
Sbjct: 357 SKSGSLEASERVFRICDDKHDC---VFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNR 413
Query: 136 ITWTSMISGYCRAGNVE 152
T +++ +G VE
Sbjct: 414 TTLVVILNACSHSGLVE 430
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 100 bits (249), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 1/135 (0%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
++ N +L Y +SG + AR F+ MP+RN SW M+ GY ++G + R FD+MPE
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 71 KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
++ SWN +V G + G L AR +F P + VV+ N ++ GY NG +EA LF ++
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL 181
Query: 131 EFR-NVITWTSMISG 144
F + IT T+++
Sbjct: 182 NFSADAITLTTVLKA 196
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 36/192 (18%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP RN + N M+ GY+ SG + FF+ MPER+ SW ++ G+A AG + A
Sbjct: 84 LFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVA 143
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVF----------------------EQT 99
RR+F+ MPEK+VV+ N+++ G + NG E A +F E
Sbjct: 144 RRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEAL 203
Query: 100 PCRTVVSWNVMIAG--------------YAENGAMDEARALFDQMEFRNVITWTSMISGY 145
C + ++I G YA+ G + A + +Q+ + + +++ISGY
Sbjct: 204 KCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGY 263
Query: 146 CRAGNVEAAYGL 157
G V + GL
Sbjct: 264 ANCGRVNESRGL 275
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 36/180 (20%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
FD+MP R+ + N ++SG+ ++G L AR F +MPE++VV+ ++L GY G E+A
Sbjct: 115 FFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEA 174
Query: 62 RRVF-------DVMPEKNVVSWNA---------------MVGGL--------------VR 85
R+F D + V+ A ++GG+ +
Sbjct: 175 LRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAK 234
Query: 86 NGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGY 145
G L A + EQ S + +I+GYA G ++E+R LFD+ R VI W SMISGY
Sbjct: 235 CGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGY 294
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%)
Query: 42 VVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC 101
V+ +L Y+ +G++ AR +FD MP++N SWN M+ G + +G + F+ P
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 102 RTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
R SWNV+++G+A+ G + AR LF+ M ++V+T S++ GY G E A L
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRL 177
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+IV + +L Y + G EA F + + + +M+ Y GR++DA+RVF+ +
Sbjct: 352 DIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIE 411
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQ-----------------TPCRTVVSWNV--- 109
K+++SWN+M G +NG F Q + C ++ S +
Sbjct: 412 NKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQ 471
Query: 110 -------------------MIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGN 150
+I Y + G ++ R +FD M + + W SMISGY G
Sbjct: 472 VFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQ 531
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 42/193 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER--------------------- 40
LFD +R ++ N+M+SGY+ + M EA F M
Sbjct: 275 LFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFL 334
Query: 41 -----------------NVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGL 83
++V + +L Y+ G +A ++F + + + N+M+
Sbjct: 335 ETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVY 394
Query: 84 VRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWT 139
G ++ A+ VFE+ ++++SWN M G+++NG E F QM ++ ++ +
Sbjct: 395 FSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLS 454
Query: 140 SMISGYCRAGNVE 152
S+IS ++E
Sbjct: 455 SVISACASISSLE 467
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 38/178 (21%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
+++++ Y + G L A + E + E + S +A++ GYA+ GRV ++R +FD + V+
Sbjct: 226 SSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI 285
Query: 75 SWNAMVGGLVRNGGLEGARMVF------------------------------EQTPCRT- 103
WN+M+ G + N A ++F +Q C
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHAC 345
Query: 104 -------VVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+V + ++ Y++ G+ EA LF ++E + I SMI Y G ++ A
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDA 403
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 39/168 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LF + + + N+M+ Y G +D+A+ FE + ++++SW +M G++ G +
Sbjct: 375 LFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVET 434
Query: 62 RRVFDVMPE----------KNVVSWNAMVGGL---------------------------- 83
F M + +V+S A + L
Sbjct: 435 LEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDL 494
Query: 84 -VRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
+ G +E R VF+ V WN MI+GYA NG EA LF +M
Sbjct: 495 YCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM 542
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 100 bits (249), Expect = 4e-22, Method: Composition-based stats.
Identities = 64/199 (32%), Positives = 94/199 (47%), Gaps = 49/199 (24%)
Query: 8 HRNIVTCN---------AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRV 58
H I+ C+ A++ Y++SG L+ AR FE+M + NVV T+M+ GY + G V
Sbjct: 163 HARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFV 222
Query: 59 EDARRVFDVMPEKNVVSWNAMVGGLVRNG--------------------------GLEGA 92
EDA +F+ K++V +NAMV G R+G + GA
Sbjct: 223 EDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGA 282
Query: 93 RMVFEQTPCRTVVSWNVMIAG--------------YAENGAMDEARALFDQMEFRNVITW 138
V V +M +G YA+ G +++AR +FDQM+ +NV +W
Sbjct: 283 CSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSW 342
Query: 139 TSMISGYCRAGNVEAAYGL 157
TSMI GY + GN E A L
Sbjct: 343 TSMIDGYGKNGNPEEALEL 361
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMV 80
+L+ G L AR F+ +P+ + ++ M+ GY G V++ + M + +
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 81 GGLVRNGGLEGARMVFEQTPCRTV-------------VSWNVMIAGYAENGAMDEARALF 127
+++ G+ M+ ++ CR V V ++ Y ++G ++ AR +F
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 128 DQMEFRNVITWTSMISGYCRAGNVEAA 154
+ M+ NV+ TSMISGY G VE A
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDA 225
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 46 TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV- 104
+++L YA G + DARRVFD M EKNV SW +M+ G +NG E A +F + +
Sbjct: 312 SSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIE 371
Query: 105 ---VSWNVMIAGYAENGAMDEARALFDQME 131
V++ ++ + +G +D+ +F+ M+
Sbjct: 372 PNYVTFLGALSACSHSGLVDKGYEIFESMQ 401
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 16/153 (10%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP----E 70
+++L Y + G +++AR F+ M E+NV SWT+M+ GY G E+A +F M E
Sbjct: 312 SSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIE 371
Query: 71 KNVVSWNAMVGGLVRNGGLEGARMVFEQ-------TPCRTVVSWNVMIAGYAE--NGAMD 121
N V++ + +G ++ +FE P + V + G A N A +
Sbjct: 372 PNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFE 431
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
ARA+ E + W +++S GNVE A
Sbjct: 432 FARAM---PERPDSDIWAALLSSCNLHGNVELA 461
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 99.8 bits (247), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 90/182 (49%), Gaps = 40/182 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+ D MP R+ V+ N++LS YL+ G++DEAR F+ M ERNV SW M+ GYA AG V++A
Sbjct: 197 VLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEA 256
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ------------------TPCRT 103
+ VFD MP ++VVSWNAMV G VF + + C +
Sbjct: 257 KEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACAS 316
Query: 104 VVSWN----------------------VMIAGYAENGAMDEARALFDQMEFRNVITWTSM 141
+ S + ++ Y++ G +D+A +F R+V TW S+
Sbjct: 317 LGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSI 376
Query: 142 IS 143
IS
Sbjct: 377 IS 378
Score = 99.8 bits (247), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 71/116 (61%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N +++ Y +SG + AR + MP R+ VSW ++L Y + G V++AR +FD M E+NV
Sbjct: 179 NTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE 238
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
SWN M+ G G ++ A+ VF+ P R VVSWN M+ YA G +E +F++M
Sbjct: 239 SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM 294
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 69/117 (58%)
Query: 33 FFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGA 92
F +S +V ++ Y +G E AR+V D MP ++ VSWN+++ + G ++ A
Sbjct: 166 FIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEA 225
Query: 93 RMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
R +F++ R V SWN MI+GYA G + EA+ +FD M R+V++W +M++ Y G
Sbjct: 226 RALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVG 282
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 82/155 (52%), Gaps = 12/155 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM------PERNVVSWTAMLGGYADAGRVEDARR 63
N T N+++ Y S + A F M P++ S+T +L A E+ R+
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDK--YSFTFVLKACAAFCGFEEGRQ 161
Query: 64 VFDVMPEKNVVS----WNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA 119
+ + + +V+ N +V R+G E AR V ++ P R VSWN +++ Y E G
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+DEARALFD+ME RNV +W MISGY AG V+ A
Sbjct: 222 VDEARALFDEMEERNVESWNFMISGYAAAGLVKEA 256
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 97.8 bits (242), Expect = 3e-21, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 92/169 (54%), Gaps = 39/169 (23%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVS 75
+++S Y+Q+G L++A F+ P R+VVS+TA++ GYA G +E+A+++FD +P K+VVS
Sbjct: 174 SLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVS 233
Query: 76 WNAMVGGLVRNGGLEGARMVF----------EQTPCRTVVS----------------W-- 107
WNAM+ G G + A +F +++ TVVS W
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 108 -----------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGY 145
N +I Y++ G ++ A LF+++ +++VI+W ++I GY
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Score = 91.7 bits (226), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 46 TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV 105
T+++ Y GR+EDA +VFD P ++VVS+ A++ G G +E A+ +F++ P + VV
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
SWN MI+GYAE G EA LF M NV T +++S ++G++E
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM- 68
N+ NA++ Y + G L+ A FE +P ++V+SW ++GGY ++A +F M
Sbjct: 300 NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 69 ---PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV------MIAGYAENGA 119
N V+ +++ G ++ R + R N +I YA+ G
Sbjct: 360 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
++ A +F+ + +++ +W +MI G+ G +A++ L
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGR 57
LF+ +P++++++ N ++ GY + EA F+ M N V+ ++L A G
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 58 VEDARRVFDVMPE--KNVVSWNAMVGGLV----RNGGLEGARMVFEQTPCRTVVSWNVMI 111
++ R + + + K V + +++ L+ + G +E A VF +++ SWN MI
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 112 AGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
G+A +G D + LF +M + IT+ ++S +G ++
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLD 487
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 97.4 bits (241), Expect = 4e-21, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 39/187 (20%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP R + N +LS Y + G +D FF+ +P+R+ VSWT M+ GY + G+ A
Sbjct: 71 LFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKA 130
Query: 62 RRVFDVMPEK---------------------------------------NVVSWNAMVGG 82
RV M ++ NV N+++
Sbjct: 131 IRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNM 190
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMI 142
+ G A+ VF++ R + SWN MIA + + G MD A A F+QM R+++TW SMI
Sbjct: 191 YAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMI 250
Query: 143 SGYCRAG 149
SG+ + G
Sbjct: 251 SGFNQRG 257
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 42/198 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD M R+I + NAM++ ++Q G +D A FE M ER++V+W +M+ G+ G A
Sbjct: 203 VFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRA 262
Query: 62 RRVFDVMPEKNVVS----------------------------------------WNAMVG 81
+F M +++S NA++
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALIS 322
Query: 82 GLVRNGGLEGARMVFEQTPCR--TVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWT 139
R GG+E AR + EQ + + + ++ GY + G M++A+ +F ++ R+V+ WT
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 140 SMISGYCRAGNVEAAYGL 157
+MI GY + G+ A L
Sbjct: 383 AMIVGYEQHGSYGEAINL 400
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 92 ARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNV 151
AR +F++ P RT SWN +++ Y++ G MD FDQ+ R+ ++WT+MI GY G
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQY 127
Query: 152 EAA 154
A
Sbjct: 128 HKA 130
Score = 59.7 bits (143), Expect = 7e-10, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM----PEK 71
A+L GY++ G +++A+ F S+ +R+VV+WTAM+ GY G +A +F M
Sbjct: 352 ALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP 411
Query: 72 NVVSWNAMVGGLVRNGGLEGARMV----FEQTPCRTVVSWNVMIAGYAENGAMDEARALF 127
N + AM+ L + + + +V N +I YA+ G + A F
Sbjct: 412 NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF 471
Query: 128 DQMEF-RNVITWTSMISGYCRAGNVEAAYGL 157
D + R+ ++WTSMI + G+ E A L
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 39/179 (21%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N +++ Y ++G AR F+ MP R SW +L Y+ G ++ FD +P+++ V
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 75 SWNAMVGGLVRNG---------------GLEGARMVFEQ-------TPC----RTVVSW- 107
SW M+ G G G+E + T C + V S+
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 108 ------------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
N ++ YA+ G A+ +FD+M R++ +W +MI+ + + G ++ A
Sbjct: 173 VKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLA 231
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 41 NVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTP 100
NV ++L YA G A+ VFD M +++ SWNAM+ ++ G ++ A FEQ
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 101 CRTVVSWNVMIAGYAENGAMDEARALFDQM 130
R +V+WN MI+G+ + G A +F +M
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 42/170 (24%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM-------PERNVVS----------- 44
F+ M R+IVT N+M+SG+ Q G A F M P+R ++
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 45 ----------------------WTAMLGGYADAGRVEDARRVFDVMPEKN--VVSWNAMV 80
A++ Y+ G VE ARR+ + K+ + + A++
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 81 GGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
G ++ G + A+ +F R VV+W MI GY ++G+ EA LF M
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP-ERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
++ NA+++ Y ++G + A F+ + ER+ VSWT+M+ A G E+A +F+ M
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Query: 69 PEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTP-----CRTVVSWNVMIAGYAENGA 119
+ + +++ + G + R F+ T+ + M+ + G
Sbjct: 507 LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGL 566
Query: 120 MDEARALFDQMEFR-NVITWTSMISGYCR 147
+ EA+ ++M +V+TW S++S CR
Sbjct: 567 LQEAQEFIEKMPIEPDVVTWGSLLSA-CR 594
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 13/163 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGR 57
+F + R++V AM+ GY Q G EA F SM N + AML +
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLAS 428
Query: 58 VEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPC-RTVVSWNVMIA 112
+ +++ + +V NA++ + G + A F+ C R VSW MI
Sbjct: 429 LSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 113 GYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNV 151
A++G +EA LF+ M + IT+ + S AG V
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 96.7 bits (239), Expect = 6e-21, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 40/187 (21%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
IV N +L Y + G L +AR F+ MP R++ SW M+ GYA+ G +E+AR++FD M E
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 71 KNVVSWNAMVGGLVRNGGLEGARMVF---EQTPCR-----TV------------------ 104
K+ SW AMV G V+ E A +++ ++ P TV
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 105 --------------VSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGN 150
V W+ ++ Y + G +DEAR +FD++ ++V++WTSMI Y ++
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 151 VEAAYGL 157
+ L
Sbjct: 300 WREGFSL 306
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFE----SMPERNVVSWTAMLGGYADAGRVE 59
D P ++V+ +++ G Q+G DEA +F+ S + + V++ +L AG VE
Sbjct: 378 DGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVE 437
Query: 60 DARRVFDVMPEKNVVS-----WNAMVGGLVRNGGLEGARMVFEQTPCR-TVVSWNVMIAG 113
F + EK+ +S + +V L R+G E + V + P + + W ++ G
Sbjct: 438 KGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGG 497
Query: 114 YAENGAMD----EARALFDQMEFRNVITWTSMISGYCRAGNVE 152
+ G +D A+ LF ++E N +T+ +M + Y AG E
Sbjct: 498 CSTYGNIDLAEEAAQELF-KIEPENPVTYVTMANIYAAAGKWE 539
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 94.7 bits (234), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 71/117 (60%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ 98
E ++ T ++G Y G VE AR+VFD M + N+V+WNA++ R + GAR +F++
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 99 TPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAY 155
R SWNVM+AGY + G ++ A+ +F +M R+ ++W++MI G G+ ++
Sbjct: 198 MLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESF 254
Score = 88.2 bits (217), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 40/196 (20%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD M N+V NA+++ + + AR F+ M RN SW ML GY AG +E A
Sbjct: 163 VFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESA 222
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ-----------------TPC--- 101
+R+F MP ++ VSW+ M+ G+ NG + + F + + C
Sbjct: 223 KRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQS 282
Query: 102 --------------RTVVSW-----NVMIAGYAENGAMDEARALFDQM-EFRNVITWTSM 141
+ SW N +I Y+ G + AR +F+ M E R +++WTSM
Sbjct: 283 GSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSM 342
Query: 142 ISGYCRAGNVEAAYGL 157
I+G G E A L
Sbjct: 343 IAGLAMHGQGEEAVRL 358
Score = 87.4 bits (215), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Query: 17 MLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSW 76
++ Y G ++ AR F+ M + N+V+W A++ V AR +FD M +N SW
Sbjct: 147 LIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSW 206
Query: 77 NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR--- 133
N M+ G ++ G LE A+ +F + P R VSW+ MI G A NG+ +E+ F +++
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 134 -NVITWTSMISGYCRAGNVE 152
N ++ T ++S ++G+ E
Sbjct: 267 PNEVSLTGVLSACSQSGSFE 286
Score = 77.8 bits (190), Expect = 3e-15, Method: Composition-based stats.
Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 44/195 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD M RN + N ML+GY+++G L+ A+ F MP R+ VSW+ M+ G A G ++
Sbjct: 194 IFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNES 253
Query: 62 RRVFDVMP----------------------------------EKNVVSW-----NAMVGG 82
F + EK SW NA++
Sbjct: 254 FLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDM 313
Query: 83 LVRNGGLEGARMVFE-QTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----IT 137
R G + AR+VFE R +VSW MIAG A +G +EA LF++M V I+
Sbjct: 314 YSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGIS 373
Query: 138 WTSMISGYCRAGNVE 152
+ S++ AG +E
Sbjct: 374 FISLLHACSHAGLIE 388
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 94.0 bits (232), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 84/147 (57%), Gaps = 4/147 (2%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
NA++ + G L A F+ + + V+W++M GYA G++++A R+FD MP K+ V
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQV 210
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM---- 130
+WN M+ G ++ ++ AR +F++ + VV+WN MI+GY G EA +F +M
Sbjct: 211 AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAG 270
Query: 131 EFRNVITWTSMISGYCRAGNVEAAYGL 157
E +V+T S++S G++E L
Sbjct: 271 EHPDVVTILSLLSACAVLGDLETGKRL 297
Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 44/187 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD + V ++M SGY + G +DEA F+ MP ++ V+W M+ G ++ A
Sbjct: 169 LFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSA 228
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVF-------EQTPCRTVVS-------- 106
R +FD EK+VV+WNAM+ G V G + A +F E T++S
Sbjct: 229 RELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVL 288
Query: 107 -----------------------------WNVMIAGYAENGAMDEARALFDQMEFRNVIT 137
WN +I YA+ G++D A +F ++ R++ T
Sbjct: 289 GDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLST 348
Query: 138 WTSMISG 144
W ++I G
Sbjct: 349 WNTLIVG 355
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAML-------- 49
LFD +P ++ CN +L G QS ++ + M +R V ++T +L
Sbjct: 68 LFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEW 127
Query: 50 --GGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW 107
G+A G+V R F + N NA++ G L A +F+ + V+W
Sbjct: 128 RSNGFAFHGKV--VRHGFVL----NEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 181
Query: 108 NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ M +GYA+ G +DEA LFD+M +++ + W MI+G + +++A L
Sbjct: 182 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSAREL 231
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 54/207 (26%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVS------------- 44
LFD +++VT NAM+SGY+ G EA F+ M + +VV+
Sbjct: 231 LFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 45 ---------------------------WTAMLGGYADAGRVEDARRVFDVMPEKNVVSWN 77
W A++ YA G ++ A VF + ++++ +WN
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWN 350
Query: 78 AMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQME-- 131
++ GL + EG+ +FE+ V V++ +I + +G +DE R F M
Sbjct: 351 TLIVGLALHHA-EGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDM 409
Query: 132 ---FRNVITWTSMISGYCRAGNVEAAY 155
N+ + M+ RAG +E A+
Sbjct: 410 YNIEPNIKHYGCMVDMLGRAGQLEEAF 436
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 43/195 (22%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
++FD M +N VT N M+ GY++SG +D A F+ MPER+++SWTAM+ G+ G E+
Sbjct: 130 LVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEE 189
Query: 61 A---------------------------------------RRVFDVMPEKNVVSWNAMVG 81
A R V + NV N+++
Sbjct: 190 ALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLID 249
Query: 82 GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVIT 137
R G +E AR VF RTVVSWN +I G+A NG E+ F +M+ + + +T
Sbjct: 250 LYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVT 309
Query: 138 WTSMISGYCRAGNVE 152
+T ++ G VE
Sbjct: 310 FTGALTACSHVGLVE 324
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 39/184 (21%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+++ A++ Y + G +AR F+ M ++N V+W M+ GY +G+V++A ++FD MP
Sbjct: 108 HVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMP 167
Query: 70 EKNVVSWNAMVGGLVRNGGLEGA------------------------------------- 92
E++++SW AM+ G V+ G E A
Sbjct: 168 ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLW 227
Query: 93 --RMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGN 150
R V Q V N +I Y G ++ AR +F ME R V++W S+I G+ GN
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGN 287
Query: 151 VEAA 154
+
Sbjct: 288 AHES 291
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 61/99 (61%)
Query: 37 MPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVF 96
+ +V+ TA++G Y+ GR + AR VFD M +KN V+WN M+ G +R+G ++ A +F
Sbjct: 104 LDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMF 163
Query: 97 EQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV 135
++ P R ++SW MI G+ + G +EA F +M+ V
Sbjct: 164 DKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGV 202
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 42/155 (27%)
Query: 42 VVSWTAMLGGYADAGRVEDARRVFDVMP----EKNVVSWNAMVG---------------- 81
VSWT+ + GR+ +A + F M E N +++ A++
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 82 -------GLVRN---------------GGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA 119
GL RN G + AR+VF+ + V+WN MI GY +G
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+D A +FD+M R++I+WT+MI+G+ + G E A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEA 190
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 43/177 (24%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N+++S Y + G DEAR FE MP +++VSW A+L GY +G + +A+ +F M EKN++
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 75 SWNAMVGGLVRNG-GLEGARMV-------FEQTPC------------------------- 101
SW M+ GL NG G EG ++ FE PC
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFE--PCDYAFSGAIKSCAVLGAYCNGQQYHA 441
Query: 102 --------RTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGN 150
++ + N +I YA+ G ++EAR +F M + ++W ++I+ + G+
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 43/194 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+F+ MP +++V+ NA+LSGY+ SG + EA+ F+ M E+N++SW M+ G A+ G E+
Sbjct: 342 IFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
Query: 62 RRVFDVMP---------------------------------------EKNVVSWNAMVGG 82
++F M + ++ + NA++
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITW 138
+ G +E AR VF PC VSWN +IA ++G EA ++++M + + IT
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521
Query: 139 TSMISGYCRAGNVE 152
++++ AG V+
Sbjct: 522 LTVLTACSHAGLVD 535
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%), Gaps = 7/147 (4%)
Query: 10 NIVTCNAMLSGYLQSGMLDEA----RWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF 65
+V NAM+SGY+ G EA R S E + ++ +++ A AG ++ ++V
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 66 DVMPEKNVVSW---NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDE 122
+ + S+ N++V + G + AR +FE+ P + +VSWN +++GY +G + E
Sbjct: 310 AYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 123 ARALFDQMEFRNVITWTSMISGYCRAG 149
A+ +F +M+ +N+++W MISG G
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENG 396
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 10/117 (8%)
Query: 47 AMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS 106
+++ Y G+ ++AR +F+ MP K++VSWNA++ G V +G + A+++F++ + ++S
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 107 WNVMIAGYAENGAMDEARALFDQME----------FRNVITWTSMISGYCRAGNVEA 153
W +MI+G AENG +E LF M+ F I +++ YC A
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC--RTVVSWNV 109
Y + + AR++FD + E + ++ MV G +G + AR VFE+ P R V +N
Sbjct: 59 YCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNA 118
Query: 110 MIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISG 144
MI G++ N A LF +M+ T+ S+++G
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAG 157
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 90.9 bits (224), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 40/186 (21%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK 71
V ++++ Y + G+L+ A+ F+S+ +N +SWTAM+ GYA +GR E+A +F ++P K
Sbjct: 141 VVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVK 200
Query: 72 NVVSWNAMVGGLVRNG-GLEGARMVFEQTPCRT--------------------------- 103
N+ SW A++ G V++G GLE + E R
Sbjct: 201 NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQV 260
Query: 104 ------------VVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNV 151
V N +I YA+ + A+ +F +M R+V++WTS+I G + G
Sbjct: 261 HGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQA 320
Query: 152 EAAYGL 157
E A L
Sbjct: 321 EKALAL 326
Score = 67.4 bits (163), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 13/167 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM-------PERNVVSWTAMLGGYAD 54
+FD MPHR+ + ++L+ Q+ + + F S+ P+ V S A++ A+
Sbjct: 60 VFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFS--ALVKACAN 117
Query: 55 AGRVEDARRV---FDVMPEKN-VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVM 110
G ++ R+V F V N V +++V + G L A+ VF+ + +SW M
Sbjct: 118 LGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAM 177
Query: 111 IAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
++GYA++G +EA LF + +N+ +WT++ISG+ ++G A+ +
Sbjct: 178 VSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSV 224
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 15 NAMLSGYLQSGMLDEARW----FFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
+A++ G +D R F S + V ++++ YA G + A+ VFD +
Sbjct: 109 SALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRV 168
Query: 71 KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
KN +SW AMV G ++G E A +F P + + SW +I+G+ ++G EA ++F +M
Sbjct: 169 KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM 228
Query: 131 EFRNV 135
V
Sbjct: 229 RRERV 233
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM-- 68
+ NA++ Y + + A+ F M R+VVSWT+++ G A G+ E A ++D M
Sbjct: 273 VFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVS 332
Query: 69 --PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR-----TVVSWNVMIAGYAENGAMD 121
+ N V++ ++ G +E R +F+ ++ + ++ +G +D
Sbjct: 333 HGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLD 392
Query: 122 EARALFDQMEF-RNVITWTSMISGYCRAG 149
EA L M F + TW +++S R G
Sbjct: 393 EAENLIHTMPFPPDEPTWAALLSACKRQG 421
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 90.5 bits (223), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 40/170 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD MP R++V+ AM++ Y + G ++ AR F+SM ER++VSW M+ GYA G DA
Sbjct: 183 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA 242
Query: 62 RRVFDVM-------PEK---------------------------------NVVSWNAMVG 81
+F + P++ NV ++
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLID 302
Query: 82 GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME 131
+ G LE A +VF TP + +V+WN MIAGYA +G +A LF++M+
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ 352
Score = 81.6 bits (200), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 40/177 (22%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMV 80
Y + G + A+ F+ MPER++VS TAM+ YA G VE AR +FD M E+++VSWN M+
Sbjct: 171 YAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMI 230
Query: 81 GGLVRNGGLEGARMVFEQ------------------TPCRTV-----------------V 105
G ++G A M+F++ + C + +
Sbjct: 231 DGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRI 290
Query: 106 SWNV-----MIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
NV +I Y++ G+++EA +F+ ++++ W +MI+GY G + A L
Sbjct: 291 RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRL 347
Score = 76.6 bits (187), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 55/85 (64%)
Query: 46 TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV 105
T ++ YA G V A++VFD MPE+++VS AM+ + G +E AR +F+ R +V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 106 SWNVMIAGYAENGAMDEARALFDQM 130
SWNVMI GYA++G ++A LF ++
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKL 249
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 78 AMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVIT 137
+V + G + A+ VF++ P R++VS MI YA+ G ++ ARALFD M R++++
Sbjct: 166 GLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVS 225
Query: 138 WTSMISGYCRAG 149
W MI GY + G
Sbjct: 226 WNVMIDGYAQHG 237
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 90.5 bits (223), Expect = 4e-19, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 40/180 (22%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ NAML Y + G +++A+ F++M E++ V+WT ML GYA + E AR V + MP
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR--------TVVS--------------- 106
+K++V+WNA++ +NG A +VF + + T+VS
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 107 W-----------------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
W + +I Y++ G ++++R +F+ +E R+V W++MI G G
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ N+++ Y G LD A F ++ E++VVSW +M+ G+ G + A +F M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 70 EKNV-VSWNAMVGGL-----VRNGGLEGARMV---FEQTPCRTVVSW-NVMIAGYAENGA 119
++V S MVG L +RN LE R V E+ ++ N M+ Y + G+
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRN--LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGS 282
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+++A+ LFD ME ++ +TWT+M+ GY + + EAA
Sbjct: 283 IEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
+F + +++V+ N+M++G++Q G D+A F+ M +V V+ +L A
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247
Query: 58 VEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+E R+V + E N+ NAM+ + G +E A+ +F+ + V+W M+ G
Sbjct: 248 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 114 YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
YA + + AR + + M ++++ W ++IS Y + G A
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N +T + LS Q G L+ RW + + N +A++ Y+ G +E +R VF
Sbjct: 364 NQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVF 423
Query: 66 DVMPEKNVVSWNAMVGGLVRNG-GLEGARMVFEQTPCRTV---VSWNVMIAGYAENGAMD 121
+ + +++V W+AM+GGL +G G E M ++ V++ + + G +D
Sbjct: 424 NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD 483
Query: 122 EARALFDQME 131
EA +LF QME
Sbjct: 484 EAESLFHQME 493
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 90.1 bits (222), Expect = 5e-19, Method: Composition-based stats.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 39/190 (20%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARR 63
D + +I+ N +++GY ++ + A F SMPERN SW+ ++ GY D+G + A++
Sbjct: 189 DRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQ 248
Query: 64 VFDVMPEKNVVSWNAMVGGLVRNGGLEGA-RMVFEQ----------------TPCRT--V 104
+F++MPEKNVVSW ++ G + G E A FE + C
Sbjct: 249 LFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGA 308
Query: 105 VSWNVMIAG--------------------YAENGAMDEARALFDQMEFRNVITWTSMISG 144
+ + I G YA+ G +D A +F M +++++WT+MI G
Sbjct: 309 LGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQG 368
Query: 145 YCRAGNVEAA 154
+ G A
Sbjct: 369 WAVHGRFHQA 378
Score = 80.5 bits (197), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 52 YADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW 107
YA G+++ A +VF+ P++ +++ WN ++ G R + A +F P R SW
Sbjct: 171 YAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSW 230
Query: 108 NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ +I GY ++G ++ A+ LF+ M +NV++WT++I+G+ + G+ E A
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETA 277
Score = 79.7 bits (195), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Query: 9 RNIVTCNA-----MLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVE 59
+N V C++ ++ Y ++G L A FE P+R +++ W ++ GY A +
Sbjct: 154 KNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMH 213
Query: 60 DARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA 119
A +F MPE+N SW+ ++ G V +G L A+ +FE P + VVSW +I G+++ G
Sbjct: 214 MATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGD 273
Query: 120 MDEARALFDQM 130
+ A + + +M
Sbjct: 274 YETAISTYFEM 284
Score = 75.5 bits (184), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 39/170 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LF MP RN + + ++ GY+ SG L+ A+ FE MPE+NVVSWT ++ G++ G E A
Sbjct: 218 LFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETA 277
Query: 62 RRVFDVMPEKN----------VVSWNAMVGGL---------------------------- 83
+ M EK V+S + G L
Sbjct: 278 ISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDM 337
Query: 84 -VRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEF 132
+ G L+ A VF + ++SW MI G+A +G +A F QM +
Sbjct: 338 YAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMY 387
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 90.1 bits (222), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 39/187 (20%)
Query: 7 PHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFD 66
P ++VT NA++ Y++ L +A F+ M ER+V+SW ++L GYA G+++ A+ +F
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 67 VMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQT-----------------PCRTVVS--- 106
+M +K +VSW AM+ G G A F + C + S
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 107 --W-----------------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCR 147
W N +I Y++ G + +A LF QME ++VI+W++MISGY
Sbjct: 260 GKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAY 319
Query: 148 AGNVEAA 154
GN A
Sbjct: 320 HGNAHGA 326
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 43/191 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD M R++++ N++LSGY + G + +A+ F M ++ +VSWTAM+ GY G +A
Sbjct: 166 VFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEA 225
Query: 62 RRVFDVMP-------EKNVVS---------------W-----------------NAMVGG 82
F M E +++S W NA++
Sbjct: 226 MDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEM 285
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITW 138
+ G + A +F Q + V+SW+ MI+GYA +G A F++M+ V IT+
Sbjct: 286 YSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITF 345
Query: 139 TSMISGYCRAG 149
++S G
Sbjct: 346 LGLLSACSHVG 356
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 89.4 bits (220), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 82/146 (56%), Gaps = 13/146 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+++ N+++ Y + G L++AR F+S+ ++V +W +M+ GY AG A +F M
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 70 EK----NVVSWNAMVGGLVRNGGLEGARMVFEQTP-----CRTVVSWNVMIAGYAENGAM 120
+ N+++WN M+ G ++NG A +F++ R +WN++IAGY +NG
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 121 DEARALFDQMEFR----NVITWTSMI 142
DEA LF +M+F N +T S++
Sbjct: 506 DEALELFRKMQFSRFMPNSVTILSLL 531
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 47/203 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
F M R+++ N++L Y Q+G +EA + M + + V+W ++GGY G+
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 58 VEDARRVFDVMPE----KNVVSWNAMVGGLVRNG----GLEGARMVF------------- 96
+ A + M +V +W AM+ GL+ NG L+ R +F
Sbjct: 298 CDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 97 --EQTPCRTVVSW--------------------NVMIAGYAENGAMDEARALFDQMEFRN 134
C V++ N ++ Y++ G +++AR +FD ++ ++
Sbjct: 358 AVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD 417
Query: 135 VITWTSMISGYCRAGNVEAAYGL 157
V TW SMI+GYC+AG AY L
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYEL 440
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 48/204 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN----VVSWTAMLGGYADAGR 57
+FD + ++++ T N+M++GY Q+G +A F M + N +++W M+ GY G
Sbjct: 409 VFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGD 468
Query: 58 VEDARRVFDVMP-----EKNVVSWNAMVGGLVRNG------------------------- 87
+A +F M ++N +WN ++ G ++NG
Sbjct: 469 EGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTIL 528
Query: 88 -------GLEGARMVFEQTPC---RTVVSW----NVMIAGYAENGAMDEARALFDQMEFR 133
L GA+MV E C R + + N + YA++G ++ +R +F ME +
Sbjct: 529 SLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK 588
Query: 134 NVITWTSMISGYCRAGNVEAAYGL 157
++ITW S+I GY G+ A L
Sbjct: 589 DIITWNSLIGGYVLHGSYGPALAL 612
Score = 77.8 bits (190), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDAR 62
F + ++ +LS Y + G + +AR F+SM ERN+ +W+AM+G Y+ R +
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 63 RVFDVMPEKNVVS----WNAMVGGLVRNGGLEGARMVFE------QTPCRTVVSWNVMIA 112
++F +M + V+ + ++ G G +E +++ + C V N ++A
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVS--NSILA 224
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
YA+ G +D A F +M R+VI W S++ YC+ G E A L
Sbjct: 225 VYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVEL 269
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 47/194 (24%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRVEDA----R 62
+VT N ++ GY Q G D A + M +V +WTAM+ G G A R
Sbjct: 282 LVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFR 341
Query: 63 RVF--DVMPE---------------------------------KNVVSWNAMVGGLVRNG 87
++F V+P +V+ N++V + G
Sbjct: 342 KMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCG 401
Query: 88 GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME---FR-NVITWTSMIS 143
LE AR VF+ + V +WN MI GY + G +A LF +M+ R N+ITW +MIS
Sbjct: 402 KLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 144 GYCRAGNVEAAYGL 157
GY + G+ A L
Sbjct: 462 GYIKNGDEGEAMDL 475
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 12/168 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVS----WTAMLGGYADAGR 57
+FD M RN+ T +AM+ Y + E F M + V+ + +L G A+ G
Sbjct: 137 VFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGD 196
Query: 58 VEDARRVFDVMPEKNVVSW----NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
VE + + V+ + + S N+++ + G L+ A F + R V++WN ++
Sbjct: 197 VEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLA 256
Query: 114 YAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
Y +NG +EA L +ME + +TW +I GY + G +AA L
Sbjct: 257 YCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL 304
Score = 67.0 bits (162), Expect = 5e-12, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 48/191 (25%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP-----ERNVVSWTAMLGGYADAGRVEDARRV 64
NI+T N M+SGY+++G EA F+ M +RN +W ++ GY G+ ++A +
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 65 FD------VMPEK-NVVSW--------------------------------NAMVGGLVR 85
F MP ++S NA+ +
Sbjct: 512 FRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAK 571
Query: 86 NGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVI----TWTSM 141
+G +E +R +F + +++WN +I GY +G+ A ALF+QM+ + + T +S+
Sbjct: 572 SGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSI 631
Query: 142 ISGYCRAGNVE 152
I + GNV+
Sbjct: 632 ILAHGLMGNVD 642
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV- 73
N++L+ Y + G LD A FF M ER+V++W ++L Y G+ E+A + M ++ +
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 74 ---VSWNAMVGGLVRNGGLEGARMVFEQTP----CRTVVSWNVMIAGYAENG----AMDE 122
V+WN ++GG + G + A + ++ V +W MI+G NG A+D
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 123 ARALFDQMEFRNVITWTSMISG 144
R +F N +T S +S
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSA 361
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 88.6 bits (218), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 17 MLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSW 76
++ Y +G + EAR F+ MPER+ ++WT M+ Y ++ A + + M EKN +
Sbjct: 910 LIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS 969
Query: 77 NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVI 136
N ++ G + G LE A +F Q P + ++SW MI GY++N EA A+F +M +I
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 1029
Query: 137 ----TWTSMISGYCRAGNVE 152
T +++IS G +E
Sbjct: 1030 PDEVTMSTVISACAHLGVLE 1049
Score = 82.0 bits (201), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 62/102 (60%)
Query: 46 TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV 105
T ++ Y+ GR+ +AR+VFD MPE++ ++W MV R ++ A + Q +
Sbjct: 908 TTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEA 967
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCR 147
+ N +I GY G +++A +LF+QM +++I+WT+MI GY +
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQ 1009
Score = 77.0 bits (188), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 43/194 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
L + M +N T N +++GY+ G L++A F MP ++++SWT M+ GY+ R +A
Sbjct: 957 LANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREA 1016
Query: 62 RRVFDVMPEKNVVS---------------------------------------WNAMVGG 82
VF M E+ ++ +A+V
Sbjct: 1017 IAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDM 1076
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITW 138
+ G LE A +VF P + + WN +I G A +G EA +F +ME N +T+
Sbjct: 1077 YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF 1136
Query: 139 TSMISGYCRAGNVE 152
S+ + AG V+
Sbjct: 1137 VSVFTACTHAGLVD 1150
Score = 66.6 bits (161), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 39/192 (20%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD MP R+ + M+S Y + +D A M E+N + ++ GY G +E A
Sbjct: 926 VFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQA 985
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVF----------EQTPCRTVVS----- 106
+F+ MP K+++SW M+ G +N A VF ++ TV+S
Sbjct: 986 ESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHL 1045
Query: 107 ------------------------WNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMI 142
+ ++ Y++ G+++ A +F + +N+ W S+I
Sbjct: 1046 GVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSII 1105
Query: 143 SGYCRAGNVEAA 154
G G + A
Sbjct: 1106 EGLAAHGFAQEA 1117
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 87 GGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYC 146
G + AR VF++ P R ++W M++ Y MD A +L +QM +N T +I+GY
Sbjct: 918 GRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYM 977
Query: 147 RAGNVEAAYGL 157
GN+E A L
Sbjct: 978 GLGNLEQAESL 988
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 88.6 bits (218), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 52/201 (25%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
+N+ N ++ Y + GM+DEA F +M ++VVSW AM+ GY+ GR EDA R+F+ M
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 69 PEK----NVVSWNAMVGGLVRNG-GLE------------------------------GAR 93
E+ +VV+W+A + G + G G E GA
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 94 MVFEQTPCRTV---------------VSWNVMIAGYAENGAMDEARALFDQM--EFRNVI 136
M ++ C + + N +I YA+ +D ARA+FD + + R+V+
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 137 TWTSMISGYCRAGNVEAAYGL 157
TWT MI GY + G+ A L
Sbjct: 442 TWTVMIGGYSQHGDANKALEL 462
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 44/184 (23%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF---- 65
N+ NA+++ Y + L +AR F+ M +VVSW +++ YA G+ + A +F
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 66 -------------DVMPE-----------------------KNVVSWNAMVGGLVRNGGL 89
+V+P +N+ N +V + G +
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMM 280
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGY 145
+ A VF + VVSWN M+AGY++ G ++A LF++M+ +V+TW++ ISGY
Sbjct: 281 DEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY 340
Query: 146 CRAG 149
+ G
Sbjct: 341 AQRG 344
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMP--ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKN 72
N ++ Y + +D AR F+S+ ER+VV+WT M+GGY+ G A + M E++
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 73 VVSW-NAMV--GGLVRNGGLEGAR---------MVFEQTPCRTVVSWNVMIAGYAENGAM 120
+ NA LV L R + +Q VS N +I YA+ G++
Sbjct: 471 CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSI 529
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+AR +FD M +N +TWTS+++GY G E A G+
Sbjct: 530 SDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 88.6 bits (218), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 39/182 (21%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV- 73
NA + + G ++ AR F+ P R++VSW ++ GY G E A V+ +M + V
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK 254
Query: 74 ---------VSWNAMVGGLVRN-----------------------------GGLEGARMV 95
VS +M+G L R G + AR +
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
Query: 96 FEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAY 155
F+ RT+VSW MI+GYA G +D +R LFD ME ++V+ W +MI G +A + A
Sbjct: 315 FDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDAL 374
Query: 156 GL 157
L
Sbjct: 375 AL 376
Score = 84.7 bits (208), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 39/179 (21%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
NA++ + + G + EAR F+++ +R +VSWT M+ GYA G ++ +R++FD M EK+VV
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQ-----------------TPCRTV------------- 104
WNAM+GG V+ + A +F++ + C +
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 105 ----VSWNV-----MIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+S NV ++ YA+ G + EA ++F ++ RN +T+T++I G G+ A
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ +++ Y + G + EA F + RN +++TA++GG A G A F+ M
Sbjct: 423 NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMI 482
Query: 70 EKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCR-----TVVSWNVMIAGYAENGAM 120
+ + +++ ++ G ++ R F Q R + +++M+ G +
Sbjct: 483 DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLL 542
Query: 121 DEARALFDQMEFR-NVITWTSMISGYCRAGNVE 152
+EA L + M + W +++ G GNVE
Sbjct: 543 EEADRLMESMPMEADAAVWGALLFGCRMHGNVE 575
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 87.8 bits (216), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 24/178 (13%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
+F++M + N+VT N +++G+ ++ +DE F M +R N V++T ++ G+
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFE------QTPCRT 103
A ++A+ VF M N++++N ++ GL +NG LE A +VFE P T
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP--T 504
Query: 104 VVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+ ++N+MI G + G +++ LF + + +VI + +MISG+CR G E A L
Sbjct: 505 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Score = 73.2 bits (178), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 90/161 (55%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+VT NA++ +++ G L EA ++ M +R ++ ++++++ G+ R+++A+ +F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 66 DVMPEK----NVVSWNAMVGGLVR----NGGLEGARMVFEQTPCRTVVSWNVMIAGYAEN 117
++M K NVV++N ++ G + + G+E R + ++ V++ +I G+ +
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 118 GAMDEARALFDQM----EFRNVITWTSMISGYCRAGNVEAA 154
D A+ +F QM N++T+ +++ G C+ G +E A
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT +++L+GY + +A + M E + +++T ++ G + +A +
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPC----RTVVSWNVMIAGYAEN 117
D M ++ N+V++ +V GL + G ++ A + + VV ++ +I +
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYC 146
D+A LF +ME + NVIT++S+IS C
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 87.8 bits (216), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 95/166 (57%), Gaps = 20/166 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT +++++G +DEA F+ M + +VVS+ ++ G+ A RVED ++F
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQ------TPCRTVVSWNVMIAGYA 115
M ++ N V++N ++ G + G ++ A+ F Q +P + ++N+++ G
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP--DIWTYNILLGGLC 411
Query: 116 ENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+NG +++A +F+ M+ R +++T+T++I G C+ G VE A+ L
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Score = 81.6 bits (200), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 96/177 (54%), Gaps = 23/177 (12%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
+FD+M + ++V+ N +++G+ ++ +++ F M +R N V++ ++ G+
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 54 DAGRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VV 105
AG V+ A+ F M ++ ++N ++GGL NG LE A ++FE R +V
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAG---NVEAAY 155
++ +I G + G ++EA +LF + + +++T+T+M+SG C G VEA Y
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 93/159 (58%), Gaps = 16/159 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IV NA++ ++ +++A FF+ + + NVV++TA++ G ++ R DA R+
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMIAGYAEN 117
M +K NV++++A++ V+NG + A+ +FE+ + +V+++ +I G +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
+DEA +FD M + +V+++ ++I+G+C+A VE
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 87.4 bits (215), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 13/168 (7%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAG 56
+LFD+M R V+ M+SGY + G +DEA F +M + ++V+ +++ G G
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 57 RVE-----DARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
+E DAR NV+ NA++ + G + AR +F+ TP +TVV+W MI
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 112 AGYAENGAMDEARALFDQM---EFR-NVITWTSMISGYCRAGNVEAAY 155
AGYA NG EA LF +M +++ N IT+ +++ +G++E +
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGW 479
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 9/150 (6%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
++I N +S Y +S AR F+ M R VSWT M+ GYA+ G +++A +F M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 69 ----PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTP---CR--TVVSWNVMIAGYAENGA 119
+ ++V+ +++ G + G LE + + + C+ V+ N +I Y++ G+
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGS 408
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAG 149
+ EAR +FD + V+TWT+MI+GY G
Sbjct: 409 IHEARDIFDNTPEKTVVTWTTMIAGYALNG 438
Score = 72.8 bits (177), Expect = 8e-14, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 45/189 (23%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMP--ERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
+ N +S Y + G LD A+ FE++ +R VVSW +M Y+ G DA ++ +M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 69 ---------------------PE------------------KNVVSWNAMVGGLVRNGGL 89
PE +++ + N + ++
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM----EFRNVITWTSMISGY 145
AR++F+ RT VSW VMI+GYAE G MDEA ALF M E +++T S+ISG
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 146 CRAGNVEAA 154
+ G++E
Sbjct: 368 GKFGSLETG 376
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ A + +++ +D A FE MPER+ +W AML G+ +G + A +F M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC--------RTVVSWNVMIAGYAENGAMD 121
+ + V L+++ E + + E V N I+ Y + G +D
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 122 EARALFDQMEF--RNVITWTSMISGYCRAGNVEAAYGL 157
A+ +F+ ++ R V++W SM Y G A+GL
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+F+ MP R+ T NAMLSG+ QSG D+A F M + + + + E +
Sbjct: 109 VFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKS 168
Query: 62 RRVFDVMP--------EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC--RTVVSWNVMI 111
++ + M + V N + + G L+ A++VFE RTVVSWN M
Sbjct: 169 LKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF 228
Query: 112 AGYAENGAMDEARALF 127
Y+ G +A L+
Sbjct: 229 KAYSVFGEAFDAFGLY 244
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 8/156 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD MP RNI T N++++G + G LDEA F SMPER+ +W +M+ G+A R E+A
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 62 RRVFDVMPEKNVV--------SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
F +M ++ V +A G N G++ ++ + V + ++
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 114 YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
Y++ G +++A+ +FD+M RNV++W S+I+ + + G
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 45/185 (24%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+I+ NA + Y + + EAR+ F+SMP RNV++ T+M+ GYA A + AR +F M
Sbjct: 288 DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMA 347
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSW------------------ 107
E+NVVSWNA++ G +NG E A +F ++ C T S+
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQ 407
Query: 108 -----------------------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISG 144
N +I Y + G ++E +F +M R+ ++W +MI G
Sbjct: 408 AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIG 467
Query: 145 YCRAG 149
+ + G
Sbjct: 468 FAQNG 472
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 87/200 (43%), Gaps = 49/200 (24%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD MP RN++ +M+SGY + AR F M ERNVVSW A++ GY G E+A
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 62 RRVF------DVMP---------------------------------------EKNVVSW 76
+F V P E ++
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 77 NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM----EF 132
N+++ V+ G +E +VF + R VSWN MI G+A+NG +EA LF +M E
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEK 490
Query: 133 RNVITWTSMISGYCRAGNVE 152
+ IT ++S AG VE
Sbjct: 491 PDHITMIGVLSACGHAGFVE 510
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSG----MLDEARWFFESMPERNVVSWTAMLGGYAD--- 54
+FD M RN+V+ N++++ + Q+G LD + ES E + V+ +++ A
Sbjct: 209 VFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 55 --AGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
G+ R V + +++ NA V + ++ AR +F+ P R V++ MI+
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
GYA + AR +F +M RNV++W ++I+GY + G E A L
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSL 373
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 94/232 (40%), Gaps = 79/232 (34%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER--------------------- 40
LF MP R+ T N+M+SG+ Q +EA +F M +
Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLND 167
Query: 41 ------------------NVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
+V +A++ Y+ G V DA+RVFD M ++NVVSWN+++
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITC 227
Query: 83 LVRNG----GLEGARMVFEQ-------------TPCRT---------------------- 103
+NG L+ +M+ E + C +
Sbjct: 228 FEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRN 287
Query: 104 -VVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
++ N + YA+ + EAR +FD M RNVI TSMISGY A + +AA
Sbjct: 288 DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAA 339
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 48 MLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW 107
++ Y+ G +ED R+VFD MP++N+ +WN++V GL + G L+ A +F P R +W
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 108 NVMIAGYAENGAMDEARALFDQME 131
N M++G+A++ +EA F M
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMH 144
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 77 NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVI 136
N ++ + G LE R VF++ P R + +WN ++ G + G +DEA +LF M R+
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 137 TWTSMISGYCRAGNVEAA 154
TW SM+SG+ + E A
Sbjct: 119 TWNSMVSGFAQHDRCEEA 136
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADA----GR 57
+FD M HR++VT N M+ Y + G++DEA FE M + NV+ +L A G
Sbjct: 168 VFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGN 227
Query: 58 VEDARRVFDVMPEKNVVSWNAMVGGLVR----NGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+ R +++ + E +V ++ LV G ++ AR F + R + M++G
Sbjct: 228 MRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSG 287
Query: 114 YAENGAMDEARALFDQMEFRNVITWTSMISGY 145
Y++ G +D+A+ +FDQ E ++++ WT+MIS Y
Sbjct: 288 YSKCGRLDDAQVIFDQTEKKDLVCWTTMISAY 319
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 39/181 (21%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVS 75
A+++ Y +G +D AR FF M RN+ TAM+ GY+ GR++DA+ +FD +K++V
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 76 WNAMVGGLVRNGGLEGARMVFEQTPCR----------TVVS------------W------ 107
W M+ V + + A VFE+ C +V+S W
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 108 -----------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYG 156
N +I YA+ G +D R +F++M RNV++W+SMI+ G A
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 431
Query: 157 L 157
L
Sbjct: 432 L 432
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAG 56
++FD +++V M+S Y++S EA FE M + +VVS +++ A+ G
Sbjct: 299 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLG 358
Query: 57 RVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
++ A+ V + E + NA++ + GGL+ R VFE+ P R VVSW+ MI
Sbjct: 359 ILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMIN 418
Query: 113 GYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
+ +G +A +LF +M+ NV +T+ ++ G +G VE
Sbjct: 419 ALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV- 73
NA+++ Y + G LD R FE MP RNVVSW++M+ + G DA +F M ++NV
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVE 442
Query: 74 --------VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARA 125
V + GLV G A M E + + M+ + + EA
Sbjct: 443 PNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALE 502
Query: 126 LFDQMEF-RNVITWTSMISGYCR 147
+ + M NV+ W S++S CR
Sbjct: 503 VIESMPVASNVVIWGSLMSA-CR 524
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 39/148 (26%)
Query: 46 TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTP----- 100
T + YA GR+ AR VFD M ++VV+WN M+ R G ++ A +FE+
Sbjct: 150 TGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Query: 101 ------CRTVVS----------------------------WNVMIAGYAENGAMDEARAL 126
C V + ++ YA G MD AR
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAA 154
F +M RN+ T+M+SGY + G ++ A
Sbjct: 270 FRKMSVRNLFVSTAMVSGYSKCGRLDDA 297
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 114 YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
YA G ++ AR +FD+M R+V+TW +MI YCR G V+ A+ L
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKL 199
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 40/181 (22%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
R + N +L +SG +DEAR F+ MPER+ +W M+ Y+++ R+ DA ++F
Sbjct: 26 RTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSN 85
Query: 69 PEKNVVSWNAMVGGLVRNGGLEGARMVF-------------------------------E 97
P KN +SWNA++ G ++G A +F E
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 98 QTPCRTVVS--------WNVMIAGYAENGAMDEARALFDQME-FRNVITWTSMISGYCRA 148
Q T+ + N ++A YA+ + EA LF+ ME +N +TWTSM++GY +
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 149 G 149
G
Sbjct: 206 G 206
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 83/150 (55%), Gaps = 12/150 (8%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF------DVM 68
NA++ Y + G++D A FE M E++V+SWTA++ G G ++A ++F +
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT 427
Query: 69 PEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEAR 124
P+K +V+S +A + L+ G + P V+ N ++ Y + G++++A
Sbjct: 428 PDKIVTASVLSASAEL-TLLEFGQQVHGNYIKSGFPSSLSVN-NSLVTMYTKCGSLEDAN 485
Query: 125 ALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+F+ ME R++ITWT +I GY + G +E A
Sbjct: 486 VIFNSMEIRDLITWTCLIVGYAKNGLLEDA 515
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 57/98 (58%)
Query: 34 FESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGAR 93
S +R + +LG + +GRV++AR++FD MPE++ +WN M+ + L A
Sbjct: 20 IHSYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAE 79
Query: 94 MVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME 131
+F P + +SWN +I+GY ++G+ EA LF +M+
Sbjct: 80 KLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%)
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
++ + N ++G L ++G ++ AR +F++ P R +WN MI Y+ + + +A LF
Sbjct: 25 DRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRS 84
Query: 130 MEFRNVITWTSMISGYCRAGNVEAAYGL 157
+N I+W ++ISGYC++G+ A+ L
Sbjct: 85 NPVKNTISWNALISGYCKSGSKVEAFNL 112
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
NI +A++ Y + ++ AR E M +VVSW +M+ G G + +A +F M
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW---------NVMIAGYAENGAM 120
E+++ + + ++ L M + +V N ++ YA+ G M
Sbjct: 321 ERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIM 380
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
D A +F+ M ++VI+WT++++G G+ + A L
Sbjct: 381 DSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKL 417
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM------ 68
N++++ Y + G L++A F SM R++++WT ++ GYA G +EDA+R FD M
Sbjct: 469 NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGI 528
Query: 69 ---PEKNVVSWNAMVGGLVRNGGLEGARMVFEQ---TPCRTVVSWNVMIAGYAENGAM-- 120
PE + M+ R+G + Q P TV W ++A ++G +
Sbjct: 529 TPGPEH----YACMIDLFGRSGDFVKVEQLLHQMEVEPDATV--WKAILAASRKHGNIEN 582
Query: 121 -DEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ A ++E N + + + + Y AG + A
Sbjct: 583 GERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEA 617
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM---------PERNVVSWTAMLGG 51
++F+ M R+++T ++ GY ++G+L++A+ +F+SM PE + + G
Sbjct: 486 VIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPE-HYACMIDLFGR 544
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLE----GARMVFEQTPCRTVVSW 107
D +VE +V P+ V W A++ ++G +E A+ + E P V +
Sbjct: 545 SGDFVKVEQLLHQMEVEPDATV--WKAILAASRKHGNIENGERAAKTLMELEP-NNAVPY 601
Query: 108 NVMIAGYAENGAMDEARALFDQMEFRNV 135
+ Y+ G DEA + M+ RN+
Sbjct: 602 VQLSNMYSAAGRQDEAANVRRLMKSRNI 629
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 102/236 (43%), Gaps = 80/236 (33%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFF--------ESMPE-------------- 39
LF+ MP ++++ N ++ Y++ G+ +A F + +P+
Sbjct: 71 LFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGEL 130
Query: 40 -----------RNVVSW--------TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMV 80
R + SW A+L Y + G+VE AR VFDVM ++V+SWN M+
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 81 GGLVRNGGLEGARMVFE-------QTPCRTVVSW-------------------------- 107
G RNG + A M+F+ T+VS
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG 250
Query: 108 ------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
N ++ Y + G MDEAR +FD+ME R+VITWT MI+GY G+VE A L
Sbjct: 251 DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALEL 306
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 18/157 (11%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFE-------SMPERNVVSWTAMLGGYAD 54
+FDVM +R++++ N M+SGY ++G +++A F+ + +VS + G D
Sbjct: 174 VFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKD 233
Query: 55 AGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVM 110
+E R V ++ EK + NA+V ++ G ++ AR VF++ R V++W M
Sbjct: 234 ---LEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCM 290
Query: 111 IAGYAENGAMDEARALFDQMEFR----NVITWTSMIS 143
I GY E+G ++ A L M+F N +T S++S
Sbjct: 291 INGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS 327
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP----E 70
NA+++ YL+ G +DEAR+ F+ M R+V++WT M+ GY + G VE+A + +M
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 71 KNVVSWNAMVG----GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARAL 126
N V+ ++V L N G Q ++ +I+ YA+ +D +
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
F + W+++I+G + V A GL
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGL 407
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF--------DVMPEKN 72
Y G + AR FE MP+ +++S+ ++ Y G DA VF +P+
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 73 VVSWNAMVGGLVRNG--GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
+ A G +++ GL + R N ++A Y G ++ AR +FD M
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 131 EFRNVITWTSMISGYCRAG 149
+ R+VI+W +MISGY R G
Sbjct: 179 KNRDVISWNTMISGYYRNG 197
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
+A+++G +Q+ ++ +A F+ M E N+ + ++L YA + A + + +
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 71 KNVVSWNAMVGGLV----RNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAENGAMDE 122
+S GLV + G LE A +F E+ + VV W +I+GY +G
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHN 508
Query: 123 ARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
A +F +M N IT+TS ++ +G VE L
Sbjct: 509 ALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTL 547
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 86.7 bits (213), Expect = 6e-18, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 40/185 (21%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGR----VEDARRV 64
+N+ N ++S Y+ +L +A F+ M ERN+V+WT M+ GY G+ +E RR+
Sbjct: 38 QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM 97
Query: 65 FDVMPEK------------------------------------NVVSWNAMVGGLVRNGG 88
D E +VV N++V V+NG
Sbjct: 98 LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 89 LEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRA 148
L A F++ + SWN +I+GY + G MDEA LF +M NV++W +ISG+
Sbjct: 158 LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK 217
Query: 149 GNVEA 153
G+ A
Sbjct: 218 GSPRA 222
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 41/189 (21%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++V N+++ Y+++G L EA F+ + + SW ++ GY AG +++A +F MP
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 70 EKNVVSWNAMVGGLVRNG-------------------------GLE-----GARMVFEQT 99
+ NVVSWN ++ G V G GL+ G + +Q
Sbjct: 201 QPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQL 260
Query: 100 PCRTVVSW--------NVMIAGYAENGAMDEARALFDQMEF---RNVITWTSMISGYCRA 148
C V S + +I Y+ G++ A +F Q + +V W SM+SG+
Sbjct: 261 HCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLIN 320
Query: 149 GNVEAAYGL 157
EAA L
Sbjct: 321 EENEAALWL 329
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM--- 68
VT A++ Y++ G +D F+ M ER+VVSWT ++ G+ GRVE+A R F M
Sbjct: 479 VTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
Query: 69 -PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS-----WNVMIAGYAENGAMDE 122
E N V++ ++ +G LE AR E + + ++ + G E
Sbjct: 539 GIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQE 598
Query: 123 ARALFDQMEFR-NVITWTSMISG 144
A L ++M + WTS+++
Sbjct: 599 ANELINKMPLEPDKTIWTSLLTA 621
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 39/143 (27%)
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNG---------------GLEGARMVF 96
+A+ G ++DA ++F +P K++++++ ++ G V++G GL+ + +
Sbjct: 387 HANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIV 446
Query: 97 EQ--TPCRTVVS--WNVMIAG--------------------YAENGAMDEARALFDQMEF 132
C ++ S W I G Y + G +D LFD M
Sbjct: 447 SNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLE 506
Query: 133 RNVITWTSMISGYCRAGNVEAAY 155
R+V++WT +I G+ + G VE A+
Sbjct: 507 RDVVSWTGIIVGFGQNGRVEEAF 529
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 86.3 bits (212), Expect = 9e-18, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 97/186 (52%), Gaps = 39/186 (20%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MP RN+VT N ML+GY ++G++++A F+ + E+++VSW M+ G ++++A
Sbjct: 230 LFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEA 289
Query: 62 RRVFDVM------PEK----NVVSWNA----------MVGGLVRNG-------------- 87
+ M P + +++S +A + G +V+ G
Sbjct: 290 LVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHF 349
Query: 88 -----GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMI 142
++ A FE + + S N +IAG+ +NG +++AR +FDQ +++ +W +MI
Sbjct: 350 YAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMI 409
Query: 143 SGYCRA 148
SGY ++
Sbjct: 410 SGYAQS 415
Score = 84.3 bits (207), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 78/170 (45%), Gaps = 43/170 (25%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN------------VVSWTAML 49
LFDVMP R+ V+ ++ GY Q+ EA F M RN V+S + L
Sbjct: 129 LFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREM--RNLGIMLNEVTLATVISACSHL 186
Query: 50 GGYADA-------------GRV----------------EDARRVFDVMPEKNVVSWNAMV 80
GG D GRV +DAR++FD MPE+N+V+WN M+
Sbjct: 187 GGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVML 246
Query: 81 GGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
G + G +E A +F+Q + +VSW MI G +DEA + +M
Sbjct: 247 NGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Score = 83.2 bits (204), Expect = 6e-17, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 39/179 (21%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE---- 70
N M+ GY++S L +A F+ MPER+ VS+T ++ GYA + +A +F M
Sbjct: 111 NIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIM 170
Query: 71 ------KNVVSWNAMVGG---------LVRNGGLEG--------------------ARMV 95
V+S + +GG L LEG AR +
Sbjct: 171 LNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKL 230
Query: 96 FEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
F++ P R +V+WNVM+ GY++ G +++A LFDQ+ +++++W +MI G R ++ A
Sbjct: 231 FDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEA 289
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 41/181 (22%)
Query: 14 CNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV 73
CN++L+ Y + +L +A F + + S+ M+ GY + R+ DA ++FDVMPE++
Sbjct: 79 CNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSC 138
Query: 74 VSWNAMVGGLVRN-----------------------------------GGLEGARMVFE- 97
VS+ ++ G +N GG+ RM+
Sbjct: 139 VSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSL 198
Query: 98 ----QTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEA 153
+ R VS N ++ Y + +AR LFD+M RN++TW M++GY +AG +E
Sbjct: 199 AIKLKLEGRVFVSTN-LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQ 257
Query: 154 A 154
A
Sbjct: 258 A 258
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 51/199 (25%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADA------- 55
F+ +I + NA+++G++++GM+++AR F+ ++++ SW AM+ GYA +
Sbjct: 363 FEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLAL 422
Query: 56 -----------------------------GRVEDARRVFDVM------PEKNVVSWNAMV 80
G +E+ +R D + P N+ + A++
Sbjct: 423 HLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTA--AII 480
Query: 81 GGLVRNGGLEGARMVFEQT---PCRTVVSWNVMIAGYAENGAMDEARALFDQMEF----R 133
+ G +E A +F QT T+ WN +I G A +G A L+ ++
Sbjct: 481 DMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKP 540
Query: 134 NVITWTSMISGYCRAGNVE 152
N IT+ ++S C AG VE
Sbjct: 541 NSITFVGVLSACCHAGLVE 559
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 44/195 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM------PER----NVVSWTAMLGG 51
LFD + ++IV+ M+ G L+ LDEA ++ M P +++S +A G
Sbjct: 261 LFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVG 320
Query: 52 -----------------------------YADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
YA + ++ A + F+ + ++ S NA++ G
Sbjct: 321 SSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAG 380
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR-----NVIT 137
V+NG +E AR VF+QT + + SWN MI+GYA++ + A LF +M + IT
Sbjct: 381 FVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAIT 440
Query: 138 WTSMISGYCRAGNVE 152
S+ S G++E
Sbjct: 441 MVSVFSAISSLGSLE 455
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 85.5 bits (210), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 8/158 (5%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
+LFD +P + V+ N+++ GY+++G +D A F M E+N +SWT M+ GY A ++
Sbjct: 171 LLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKE 230
Query: 61 ARRVFDVMPEKNV----VSWNAMVGGLVRNGGLEGARMV---FEQTPCRT-VVSWNVMIA 112
A ++F M +V VS + + G LE + + +T R V V+I
Sbjct: 231 ALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLID 290
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGN 150
YA+ G M+EA +F ++ ++V WT++ISGY G+
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAG 56
++FD + N M+ G+ S + + ++ M N ++ ++L ++
Sbjct: 70 IVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLS 129
Query: 57 RVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
E+ ++ + E +V + N+++ G + A ++F++ P VSWN +I
Sbjct: 130 AFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIK 189
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMISGYCRA 148
GY + G MD A LF +M +N I+WT+MISGY +A
Sbjct: 190 GYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQA 225
Score = 66.2 bits (160), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ 98
E +V + +++ YA G + A +FD +PE + VSWN+++ G V+ G ++ A +F +
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRK 206
Query: 99 TPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
+ +SW MI+GY + EA LF +M+ +V ++ + +S + G +E
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 17 MLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP----EKN 72
++ Y + G ++EA F+++ +++V +WTA++ GYA G +A F M + N
Sbjct: 288 LIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPN 347
Query: 73 VVSWNAMVGGLVRNGGLEGARMVF-----EQTPCRTVVSWNVMIAGYAENGAMDEARALF 127
V+++ A++ G +E +++F + T+ + ++ G +DEA+
Sbjct: 348 VITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFI 407
Query: 128 DQMEFR-NVITWTSMISGYCR 147
+M + N + W +++ CR
Sbjct: 408 QEMPLKPNAVIWGALLKA-CR 427
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 85.5 bits (210), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 43/171 (25%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDAR 62
FD N+V+ ++SGYL+ +EA F +MPER+VV+W A++GG++ GR E+A
Sbjct: 151 FDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAV 210
Query: 63 RVF-DVMPEK----------------------------------------NVVSWNAMVG 81
F D++ E NV WN+++
Sbjct: 211 NTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLIS 270
Query: 82 GLVRNGGLEGARMVFE--QTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
+ G +E + + F + R +VSWN MI GYA NG +EA A+F++M
Sbjct: 271 FYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM 321
Score = 82.8 bits (203), Expect = 9e-17, Method: Composition-based stats.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 43/191 (22%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ +A+L+ Y++ L +AR F+ + NVVS T ++ GY E+A +F MP
Sbjct: 127 NVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP 186
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVF------------EQT-PCR-------------- 102
E++VV+WNA++GG + G E A F E T PC
Sbjct: 187 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGK 246
Query: 103 --------------TVVSWNVMIAGYAENGAMDEARALFDQM--EFRNVITWTSMISGYC 146
V WN +I+ Y++ G M+++ F+++ E RN+++W SMI GY
Sbjct: 247 SIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYA 306
Query: 147 RAGNVEAAYGL 157
G E A +
Sbjct: 307 HNGRGEEAVAM 317
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 39/176 (22%)
Query: 18 LSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF------------ 65
L ++ S ++ A F+ +PE +V+S TA++G + R +A + F
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 66 --------------DVMPEKNV--------VSWNAMVGGLVRN-----GGLEGARMVFEQ 98
DV K + ++ N VG V N L AR F+
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 99 TPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
T VVS +I+GY + +EA +LF M R+V+TW ++I G+ + G E A
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEA 209
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 10/159 (6%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP--ERNVVSWTAMLGGYADAGRVE 59
+FD M +++ NA+L+GY + G +DEAR E MP RN VSWT ++ GYA +GR
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRAS 232
Query: 60 DARRVFDVMPEKNV----VSWNAMVGGLVRNGGLE-GARM---VFEQTPCRTVVSWNVMI 111
+A VF M +NV V+ A++ G LE G R+ V + R V N +I
Sbjct: 233 EAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVI 292
Query: 112 AGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGN 150
YA++G + +A +F+ + RNV+TWT++I+G G+
Sbjct: 293 DMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 46 TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC--RT 103
T ++ Y G + DAR++FD M K+V WNA++ G + G ++ AR + E PC R
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 104 VVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
VSW +I+GYA++G EA +F +M NV +T +++S G++E
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLE 267
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
R + NA++ Y +SG + +A FE + ERNVV+WT ++ G A G +A +F+ M
Sbjct: 283 RAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRM 342
Query: 69 PEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV-----MIAGYAENGA 119
+ V V++ A++ G ++ + +F + + N+ MI G
Sbjct: 343 VKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGK 402
Query: 120 MDEARALFDQMEFR-NVITWTSMISG 144
+ EA + M F+ N W S+++
Sbjct: 403 LREADEVIKSMPFKANAAIWGSLLAA 428
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 84.7 bits (208), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 95/176 (53%), Gaps = 20/176 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
+F++M + N+VT + ++ G+ ++ ++E F M +R N V++T ++ G+
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 54 DAGRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VV 105
A ++A+ VF M N++++N ++ GL +NG L A +VFE T +
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++N+MI G + G +++ LF + + NVI + +MISG+CR G+ E A L
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 89/164 (54%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++V N ++ G + +D+A F M + +V ++++++ + GR DA R+
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
M E+ NVV+++A++ V+ G L A ++++ R++ +++ +I G+ +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 118 GAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
+DEA+ +F+ M F NV+T++++I G+C+A VE L
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 16/156 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT +++L+GY S + +A + M E + ++T ++ G + +A +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPC----RTVVSWNVMIAGYAEN 117
D M ++ ++V++ +V GL + G ++ A + ++ VV +N +I G +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAG 149
MD+A LF +M+ + +V T++S+IS C G
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYA 53
L D M R ++VT +++G + G +D A + M E +VV + ++ G
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVV 105
++DA +F M K +V ++++++ L G A + R VV
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+++ +I + + G + EA L+D+M R ++ T++S+I+G+C ++ A
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 41/184 (22%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N M+ Y++ +D AR F+ MPER+V+SWT ++ YA G +E A +F+ +P K++V
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQ------------------------------------ 98
+W AMV G +N + A F++
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 99 -----TPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEA 153
+P VV + +I Y++ G ++EA +F M +NV T++SMI G G +
Sbjct: 308 QKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQE 367
Query: 154 AYGL 157
A L
Sbjct: 368 ALHL 371
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV--VSWT-------------------- 46
RN A++ GY G DEA + M + + VS+T
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 47 -----------------AMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGL 89
M+ Y ++ AR+VFD MPE++V+SW ++ R G +
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRA 148
E A +FE P + +V+W M+ G+A+N EA FD+ME + ++GY A
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA 290
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 30 ARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGG- 88
AR E + RN WTA++ GYA G+ ++A ++ M ++ + + L++ G
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 89 ---LEGARMVFEQT-----PCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTS 140
L R QT C V N MI Y + ++D AR +FD+M R+VI+WT
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVG-NTMIDMYVKCESIDCARKVFDEMPERDVISWTE 220
Query: 141 MISGYCRAGNVEAAYGL 157
+I+ Y R GN+E A L
Sbjct: 221 LIAAYARVGNMECAAEL 237
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 46/175 (26%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM------------------------ 37
LF+ +P +++V AM++G+ Q+ EA +F+ M
Sbjct: 237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGA 296
Query: 38 -----------------PERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMV 80
P +VV +A++ Y+ G VE+A VF M KNV ++++M+
Sbjct: 297 SKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356
Query: 81 GGLVRNGGLEGARMVFEQTPCRTVVSWNVM-----IAGYAENGAMDEARALFDQM 130
GL +G + A +F +T + N + + + +G +D+ R +FD M
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM 411
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM----PEKNVVSW 76
Y SG ++ A FE MPERNVVSWTAM+ G+A RV+ +++ M + N ++
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 77 NAMVGGLVRNGGLEGARMVFEQTPCRTVVSW----NVMIAGYAENGAMDEARALFDQMEF 132
A++ +G L R V QT + S+ N +I+ Y + G + +A +FDQ
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 133 RNVITWTSMISGYCRAG 149
++V++W SMI+GY + G
Sbjct: 285 KDVVSWNSMIAGYAQHG 301
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 83.6 bits (205), Expect = 5e-17, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 89/162 (54%), Gaps = 16/162 (9%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
++D MPH+N V+ N M+SG++++G + AR F++MP+R VV+WT ++G YA ++A
Sbjct: 70 VYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEA 129
Query: 62 RRVFDVMPEKNV------VSWNAMVGGL--------VRNGGLEGARMVFEQTPCRTVVSW 107
++F M + V++ ++ G V ++ F+ P TV
Sbjct: 130 FKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS-- 187
Query: 108 NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
NV++ Y E +D A LF+++ ++ +T+ ++I+GY + G
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDG 229
Score = 80.1 bits (196), Expect = 5e-16, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 56 GRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYA 115
G+V AR+V+D MP KN VS N M+ G V+ G + AR +F+ P RTVV+W +++ YA
Sbjct: 62 GQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYA 121
Query: 116 ENGAMDEARALFDQM------EFRNVITWTSMISG 144
N DEA LF QM + +T+T+++ G
Sbjct: 122 RNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPG 156
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N+++ Y + M +EA F+S+P+R VSWTA++ GY G ++F M N+
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV--------MIAGYAENGAMDEARAL 126
+ + +++ + ++ +Q + S N+ ++ YA+ G++ +A +
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAAYG 156
F++M RN ++W ++IS + G+ EAA G
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIG 539
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
+ D RV+ R+ + + N +V L+R G + AR V+++ P + VS N MI
Sbjct: 29 FLDTRRVD--ARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMI 86
Query: 112 AGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+G+ + G + AR LFD M R V+TWT ++ Y R + + A+ L
Sbjct: 87 SGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKL 132
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAG 56
MLFD MP + V+ N ++S Y Q+ + + FF M +R + ML A+
Sbjct: 306 MLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLS 365
Query: 57 RVEDARRV----FDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
++ R++ + + N++V + E A ++F+ P RT VSW +I+
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 113 GYAENGAMDEARALFDQMEFRNV 135
GY + G LF +M N+
Sbjct: 426 GYVQKGLHGAGLKLFTKMRGSNL 448
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ + + ++ Y + G + +A FE MP+RN VSW A++ +AD G E A F M
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Query: 70 EKNV----VSWNAMVGGLVRNGGLEGARMVFE-QTPCRTVVS----WNVMIAGYAENGAM 120
E + VS ++ G +E F+ +P + + M+ NG
Sbjct: 546 ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRF 605
Query: 121 DEARALFDQMEFR-NVITWTSMISGYCR 147
EA L D+M F + I W+S+++ CR
Sbjct: 606 AEAEKLMDEMPFEPDEIMWSSVLNA-CR 632
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 83.6 bits (205), Expect = 5e-17, Method: Composition-based stats.
Identities = 52/159 (32%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD +P +N +T N L G ++G L+ A F+ MPER+VVSW M+ G G E
Sbjct: 61 LFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYG 120
Query: 62 RRVF------DVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYA 115
RVF ++ P + S A + VR+G + +V WN ++ Y
Sbjct: 121 IRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYR 180
Query: 116 ENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
G D A ++F ME R+V++W +I +GN E A
Sbjct: 181 RLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVA 219
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
Y +G V +A ++FD +P+KN ++WN + GL +NG L A +F++ P R VVSWN MI
Sbjct: 49 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 108
Query: 112 AGYAENGAMDEA-RALFD 128
+G G + R FD
Sbjct: 109 SGLVSCGFHEYGIRVFFD 126
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 83.2 bits (204), Expect = 6e-17, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQS-GMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
LF H +V A+L Y S + AR F+ M ERNVVSWTAML GYA +G + +
Sbjct: 152 LFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISN 211
Query: 61 ARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGA-----RMVFEQTPCRTVVSWNVMIAGYA 115
A +F+ MPE++V SWNA++ +NG A RM+ E + V+ +++ A
Sbjct: 212 AVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACA 271
Query: 116 ENGAMDEARALFDQMEFR-----NVITWTSMISGYCRAGNVEAA 154
+ G + A+ + +R +V S++ Y + GN+E A
Sbjct: 272 QTGTLQLAKGI-HAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEA 314
Score = 78.2 bits (191), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD M RN+V+ AMLSGY +SG + A FE MPER+V SW A+L G +A
Sbjct: 184 LFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEA 243
Query: 62 RRVFDVMPEK-----NVVSWNAMVGGLVRNGGLEGARMV----FEQTPCRTVVSWNVMIA 112
+F M + N V+ ++ + G L+ A+ + + + V N ++
Sbjct: 244 VSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVD 303
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
Y + G ++EA ++F +++ W SMI+ + G E A
Sbjct: 304 LYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEA 345
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 104 VVSWNVMIAGYAEN-GAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
VV ++ YA + + AR LFD+M RNV++WT+M+SGY R+G++ A L
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVAL 215
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 83.2 bits (204), Expect = 8e-17, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 49/202 (24%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP---------------------- 38
M+FD M +++VT N ++SGY+Q G++++A + + M
Sbjct: 330 MVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTE 389
Query: 39 -----------------ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
E ++V + ++ YA G + DA++VFD EK+++ WN ++
Sbjct: 390 NLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLA 449
Query: 82 GLVRNG-GLEGARMVF----EQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME----F 132
+G E R+ + E P V++WN++I NG +DEA+ +F QM+
Sbjct: 450 AYAESGLSGEALRLFYGMQLEGVP-PNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGII 508
Query: 133 RNVITWTSMISGYCRAGNVEAA 154
N+I+WT+M++G + G E A
Sbjct: 509 PNLISWTTMMNGMVQNGCSEEA 530
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 12/154 (7%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
+ +++ Y + G+LD+A F+ +P+RN V+W A++ GY G+ E+A R+F M +
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 71 KNV----------VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
+ V +S +A +GG V G A + ++ ++ Y + G +
Sbjct: 268 QGVEPTRVTVSTCLSASANMGG-VEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKVGLI 325
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ A +FD+M ++V+TW +ISGY + G VE A
Sbjct: 326 EYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDA 359
Score = 69.3 bits (168), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 88/164 (53%), Gaps = 14/164 (8%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
+FD +P RN V NA++ GY+Q+G +EA F M ++ V V+ + L A+ G
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG 289
Query: 58 VEDARR-----VFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
VE+ ++ + + M N++ +++ + G +E A MVF++ + VV+WN++I+
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIIS 348
Query: 113 GYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
GY + G +++A + M + +T +++S R N++
Sbjct: 349 GYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLK 392
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMV 80
Y + L+ A F + RNV SW A++G G E A F M E + N +V
Sbjct: 117 YAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176
Query: 81 GGLVRN-GGLEGARM-------VFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEF 132
+ + G L+ +R V + V + + Y + G +D+A +FD++
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236
Query: 133 RNVITWTSMISGYCRAGNVEAAYGL 157
RN + W +++ GY + G E A L
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRL 261
Score = 46.2 bits (108), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N++T N ++ L++G +DEA+ F M N++SWT M+ G G E+A
Sbjct: 475 NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFL 534
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARM----VFEQTPCRTVVSWNV-MIAGYAE 116
M E N S + L R + ++VS ++ YA+
Sbjct: 535 RKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAK 594
Query: 117 NGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
G +++A +F + + +MIS Y GN++ A L
Sbjct: 595 CGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIAL 635
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 39/182 (21%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N+++ Y G ++ F+ MP+R+VVSW ++ Y GR EDA VF M +++ +
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 75 SW---------------------------------------NAMVGGLVRNGGLEGARMV 95
+ NA+V + G L+ AR V
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAV 204
Query: 96 FEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAY 155
F+ + V W M+ GY G +DEAR LF++ ++V+ WT+M++GY + + A
Sbjct: 205 FDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEAL 264
Query: 156 GL 157
L
Sbjct: 265 EL 266
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 43/194 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSW---------------- 45
+FD MP R++V+ N ++S Y+ +G ++A F+ M + + + +
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 46 -----------------------TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
A++ + G ++ AR VFD M +KNV W +MV G
Sbjct: 163 NLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFG 222
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITW 138
V G ++ AR++FE++P + VV W M+ GY + DEA LF M+ +
Sbjct: 223 YVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVL 282
Query: 139 TSMISGYCRAGNVE 152
S+++G + G +E
Sbjct: 283 VSLLTGCAQTGALE 296
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
NA++ + + G LD+AR F+SM ++NV WT+M+ GY GR+++AR +F+ P K+VV
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV----MIAGYAENGAMDEARALFDQM 130
W AM+ G V+ + A +F + N ++ G A+ GA+++ + + +
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 131 EFRNV----ITWTSMISGYCRAGNVEAA 154
V + T+++ Y + G +E A
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETA 333
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD M +N+ +M+ GY+ +G +DEAR FE P ++VV WTAM+ GY R ++A
Sbjct: 204 VFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEA 263
Query: 62 RRVFDVMPEKNVVSWN----AMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAG 113
+F M + N +++ G + G LE + + E V ++
Sbjct: 264 LELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDM 323
Query: 114 YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
YA+ G ++ A +F +++ R+ +WTS+I G G
Sbjct: 324 YAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNG 359
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%)
Query: 41 NVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTP 100
+V ++ Y G+ + R+VFD MP +++VSW M+ GLV N L+ A +VF Q P
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP 212
Query: 101 CRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV 135
R VVSW MI Y +N DEA LF +M+ +V
Sbjct: 213 MRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDV 247
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD MP R+IV+ ML G + + LD A F MP RNVVSWTAM+ Y R ++A
Sbjct: 176 VFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEA 235
Query: 62 RRVF------DVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMI 111
++F DV P N + ++ + G L R V + V +I
Sbjct: 236 FQLFRRMQVDDVKP--NEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALI 293
Query: 112 AGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
Y++ G++ +AR +FD M+ +++ TW SMI+ G E A L
Sbjct: 294 DMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSL 339
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 72 NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME 131
+V N ++ + G + R VF++ P R++VSW M+ G N +D A +F+QM
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP 212
Query: 132 FRNVITWTSMISGYCRAGNVEAAYGL 157
RNV++WT+MI+ Y + + A+ L
Sbjct: 213 MRNVVSWTAMITAYVKNRRPDEAFQL 238
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 39/135 (28%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP-------ERNVVSW-------- 45
++F+ MP RN+V+ AM++ Y+++ DEA F M E +V+
Sbjct: 206 IVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLG 265
Query: 46 ------------------------TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
TA++ Y+ G ++DAR+VFDVM K++ +WN+M+
Sbjct: 266 SLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMIT 325
Query: 82 GLVRNGGLEGARMVF 96
L +G E A +F
Sbjct: 326 SLGVHGCGEEALSLF 340
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 82.4 bits (202), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 53/92 (57%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ 98
E +V TA++G Y G + DA +VFD MPE+N V+WN M+ GL G E A E+
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 99 TPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
P RTVVSW +I GYA EA LF +M
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRM 246
Score = 77.0 bits (188), Expect = 5e-15, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD MP RN VT N M++G G ++A F E MP R VVSWT ++ GYA + ++A
Sbjct: 180 VFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEA 239
Query: 62 RRVFDVMPEKNVVS-------------WNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWN 108
+F M + + WN +G L G + PC V+ N
Sbjct: 240 ILLFSRMVACDAIKPNEITILAILPAVWN--LGDLKMCGSVHAYVGKRGFVPCDIRVT-N 296
Query: 109 VMIAGYAENGAMDEARALFDQME--FRNVITWTSMISGYCRAG 149
+I YA+ G + A F ++ +N+++WT+MIS + G
Sbjct: 297 SLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHG 339
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
E +V A+VG + G + A VF++ P R V+WNVMI G G ++A ++
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 130 MEFRNVITWTSMISGYCR 147
M R V++WT++I GY R
Sbjct: 215 MPNRTVVSWTTIIDGYAR 232
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 82.0 bits (201), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 91/170 (53%), Gaps = 18/170 (10%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVE 59
D P N+VT N ++ G+ ++ +DE F M +R N V++T ++ G+ A +
Sbjct: 391 DCFP--NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 60 DARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMI 111
+A+ VF M ++++++ ++ GL NG +E A +VFE + ++N+MI
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 112 AGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G + G +++ LF + + NV+T+T+M+SG+CR G E A L
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 93/176 (52%), Gaps = 20/176 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
L+D M R +I T +++++G+ LDEA+ FE M + NVV++ ++ G+
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV---- 105
A RV++ +F M ++ N V++ ++ G + + A++VF+Q V+
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++++++ G NG ++ A +F+ ++ ++ T+ MI G C+AG VE + L
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 85/163 (52%), Gaps = 16/163 (9%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFD 66
+V N ++ +++A F M + NVV++ +++ + GR DA R+
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 67 VMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENG 118
M E+ NVV+++A++ V+ G L A ++++ R++ +++ +I G+ +
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 119 AMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
+DEA+ +F+ M F NV+T+ ++I G+C+A V+ L
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Score = 63.2 bits (152), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 20/173 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
LF M R N VT ++ G+ Q+ D A+ F+ M ++++++ +L G
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 54 DAGRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVV 105
+ G+VE A VF+ + E ++ ++N M+ G+ + G +E +F + VV
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAA 154
++ M++G+ G +EA ALF +M+ + T+ ++I + R G+ A+
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 81.3 bits (199), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 22/177 (12%)
Query: 2 LFDVM----PHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER-----NVVSWTAMLGGY 52
L++VM + ++ T ++++G G+LDEAR F M ER N V +T ++ G+
Sbjct: 280 LYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM-ERNGCYPNEVIYTTLIHGF 338
Query: 53 ADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TV 104
+ RVED ++F M +K N +++ ++ G G + A+ VF Q R +
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 105 VSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++NV++ G NG +++A +F+ M R N++T+T +I G C+ G VE A+ L
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Score = 77.8 bits (190), Expect = 3e-15, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N V ++ G+ +S +++ F M ++ N +++T ++ GY GR + A+ VF
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
+ M + ++ ++N ++ GL NG +E A M+FE R +V++ ++I G +
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G +++A LF + + NVIT+T+MISG+CR G + A L
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSL 490
Score = 75.1 bits (183), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+VT NA+++G + G +A W M +R NV+++TA++ + G++ +A+ ++
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 66 DVMPE----KNVVSWNAMVGGLVRNGGLEGARMVF---EQTPCR-TVVSWNVMIAGYAEN 117
+VM + +V ++ +++ GL G L+ AR +F E+ C V + +I G+ ++
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+++ +F +M + N IT+T +I GYC G + A
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Score = 59.7 bits (143), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVFD 66
+ TCN ++ S A F M E ++V++T++L GY R+EDA +FD
Sbjct: 118 LCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD 177
Query: 67 VMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENG 118
+ + NVV++ ++ L +N L A +F Q VV++N ++ G E G
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG 237
Query: 119 AM-DEARALFDQMEFR---NVITWTSMISGYCRAGNVEAA 154
D A L D M+ R NVIT+T++I + + G + A
Sbjct: 238 RWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 12/134 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N +T ++ GY G D A+ F M R ++ ++ +L G G+VE A +F
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGAR----MVFEQTPCRTVVSWNVMIAGYAEN 117
+ M ++ N+V++ ++ G+ + G +E A +F + V+++ MI+G+
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 118 GAMDEARALFDQME 131
G + EA +LF +M+
Sbjct: 482 GLIHEADSLFKKMK 495
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 80.9 bits (198), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 13/168 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD MPH+N+VT N++L Y +SG + AR F+ M ER+VV+W++M+ GY G A
Sbjct: 165 LFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKA 224
Query: 62 RRVFDVM-----PEKNVVSWNAMVGGLVRNGGLEGARMVFE-----QTPCRTVVSWNVMI 111
+FD M + N V+ +++ G L + V P TV+ +I
Sbjct: 225 LEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPL-TVILQTSLI 283
Query: 112 AGYAENGAMDEARALFDQMEFR--NVITWTSMISGYCRAGNVEAAYGL 157
YA+ G++ +A ++F + + + + W ++I G G + + L
Sbjct: 284 DMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQL 331
Score = 79.7 bits (195), Expect = 7e-16, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ CN ++ Y AR F+ MP +N+V+W ++L YA +G V AR VFD M
Sbjct: 142 DLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS 201
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQ-----TPCRTVVSWNVMIAGYAENGAMDEA- 123
E++VV+W++M+ G V+ G A +F+Q + V+ +I A GA++
Sbjct: 202 ERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGK 261
Query: 124 ---RALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
R + D VI TS+I Y + G++ A+ +
Sbjct: 262 TVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSV 298
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM-----PERNVVSWTAMLGGYADA 55
++FD M R++VT ++M+ GY++ G ++A F+ M + N V+ +++ A
Sbjct: 195 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 56 GRVEDA----RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV--VSWNV 109
G + R + DV V+ +++ + G + A VF + + + WN
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 110 MIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAY 155
+I G A +G + E+ LF +M + IT+ +++ G V+ A+
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAW 364
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 80.9 bits (198), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 40/175 (22%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM- 68
++ N M++ Y + ++ AR F+ M ER+VVSW +M+ GY+ +G ED ++++ M
Sbjct: 166 DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAML 225
Query: 69 ---------------------------------------PEKNVVSWNAMVGGLVRNGGL 89
+ ++ NA++G + G L
Sbjct: 226 ACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSL 285
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISG 144
+ AR +F++ + V++ +I+GY +G + EA ALF +ME + TW +MISG
Sbjct: 286 DYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISG 340
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 39/183 (21%)
Query: 14 CNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV 73
CNA++ Y + G LD AR F+ M E++ V++ A++ GY G V++A +F M +
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Query: 74 VSWNAMVGGLVRN---------------------------------------GGLEGARM 94
+WNAM+ GL++N GG E
Sbjct: 332 STWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAF 391
Query: 95 VFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ +I YA+ G + A+ +FD + R++I WT++I+ Y G+ ++A
Sbjct: 392 AIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSA 451
Query: 155 YGL 157
L
Sbjct: 452 CSL 454
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 43/196 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD M ++ VT A++SGY+ G++ EA F M + +W AM+ G E+
Sbjct: 291 LFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEV 350
Query: 62 RRVFDVM----PEKNVVSWNAMVGGL----------------VRNGG------------- 88
F M N V+ ++++ L +RNG
Sbjct: 351 INSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDN 410
Query: 89 ------LEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITW 138
L GA+ VF+ R++++W +I YA +G D A +LFDQM+ +T
Sbjct: 411 YAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTL 470
Query: 139 TSMISGYCRAGNVEAA 154
T+++S + +G+ + A
Sbjct: 471 TAVLSAFAHSGDSDMA 486
Score = 69.7 bits (169), Expect = 8e-13, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 40/159 (25%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ 98
+ +V M+ Y +E AR+VFD M E++VVSWN+M+ G ++G E + +++
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 99 T-PCR-------TVVS--------------------------------WNVMIAGYAENG 118
C TV+S N +I YA+ G
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 119 AMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
++D ARALFD+M ++ +T+ ++ISGY G V+ A L
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMAL 322
Score = 49.7 bits (117), Expect = 8e-07, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 33/154 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED- 60
+FD + RN + NA+L Y M +A F +SW +DA R +
Sbjct: 79 VFDEITVRNAFSYNALLIAYTSREMYFDAFSLF--------LSWIGSSCYSSDAARPDSI 130
Query: 61 --------------------ARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVF 96
AR+V + + +V N M+ + +E AR VF
Sbjct: 131 SISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVF 190
Query: 97 EQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
++ R VVSWN MI+GY+++G+ ++ + ++ M
Sbjct: 191 DEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAM 224
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 80.9 bits (198), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 20/166 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++VT N ++ G+ + ++E F M +R N V++ ++ G AG + A+ +F
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFE------QTPCRTVVSWNVMIAGYA 115
M N++++N ++ GL +NG LE A +VFE P T+ ++N+MI G
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP--TIYTYNIMIEGMC 512
Query: 116 ENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+ G +++ LF + + +V+ + +MISG+CR G+ E A L
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Score = 80.1 bits (196), Expect = 5e-16, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 95/176 (53%), Gaps = 20/176 (11%)
Query: 2 LFDVMPHRNI----VTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
L+D M R+I VT +++++G+ LDEA+ FE M + +VV++ ++ G+
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVV 105
RVE+ VF M ++ N V++N ++ GL + G + A+ +F++ ++
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++N ++ G +NG +++A +F+ ++ + T+ MI G C+AG VE + L
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N VT N ++ G Q+G D A+ F+ M N++++ +L G G++E A VF
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
+ + E + ++N M+ G+ + G +E +F + VV++N MI+G+
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 118 GAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAA 154
G+ +EA ALF +M+ N + ++I R G+ EA+
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Score = 56.6 bits (135), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRVEDARRVF 65
NIVT +++L+GY S + EA + M + N V++ ++ G + +A +
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVF---EQTPCRT-VVSWNVMIAGYAEN 117
D M K ++V++ +V GL + G + A + EQ V+ +N +I G +
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAG 149
MD+A LF +ME + NV+T++S+IS C G
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+V +++L Y + G + EAR F M ++N VSW+A+LGGY G E A +F M
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME 358
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAMDEARA 125
EK++ + ++ + + + Q R V+ + +I Y ++G +D A
Sbjct: 359 EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASR 418
Query: 126 LFDQMEFRNVITWTSMISGYCRAGNVEAA 154
++ +M RN+ITW +M+S + G E A
Sbjct: 419 VYSKMSIRNMITWNAMLSALAQNGRGEEA 447
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+F+ M +N V+ +A+L GY Q+G ++A F M E+++ + +L A V
Sbjct: 322 VFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLG 381
Query: 62 RRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAEN 117
+ + + NV+ +A++ ++G ++ A V+ + R +++WN M++ A+N
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQN 441
Query: 118 GAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
G +EA + F+ M + + I++ ++++ G V+
Sbjct: 442 GRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD 480
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 29 EARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE-KNVVSWNAMVGGLVRNG 87
+AR F+ MPE +V+ WTA+L ++ E+A +F M K +V + G ++
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 88 G----LEGARMVFEQTPCR----TVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWT 139
G L+ + + + VV + ++ Y + G++ EAR +F+ M +N ++W+
Sbjct: 276 GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWS 335
Query: 140 SMISGYCRAGNVEAA 154
+++ GYC+ G E A
Sbjct: 336 ALLGGYCQNGEHEKA 350
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N++ +A++ Y +SG +D A + M RN+++W AML A GR E+A F+ M
Sbjct: 396 NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMV 455
Query: 70 EKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS-----WNVMIAGYAENGAM 120
+K + +S+ A++ G ++ R F + ++ MI G
Sbjct: 456 KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLF 515
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+EA L ++ E RN + ++ G C A N +A+
Sbjct: 516 EEAENLLERAECRNDASLWGVLLGPC-AANADAS 548
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
++ M RN++T NAMLS Q+G +EA FF M ++ + +S+ A+L G
Sbjct: 419 VYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGM 478
Query: 58 VEDARRVFDVMPEKNVVS-----WNAMVGGLVRNGGLEGARMVFEQTPCRTVVS-WNVMI 111
V++ R F +M + + ++ M+ L R G E A + E+ CR S W V++
Sbjct: 479 VDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL 538
Query: 112 AGYAEN 117
A N
Sbjct: 539 GPCAAN 544
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 15 NAMLSGYLQSGM-LDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP---- 69
N++LS Y + G + E R F+ ++ +SWT+M+ GY A VF M
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG-----YAENGAMDEAR 124
+ N + ++ V G + R F WN I+ Y N +AR
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGR-CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR 218
Query: 125 ALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+FD+M +VI WT+++S + + E A GL
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGL 251
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 79.7 bits (195), Expect = 8e-16, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 16/157 (10%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLG----GYADAGRVEDARRV 64
RN+VT +++ GY + G+++EA FE + E+ +V+ M G GY G++ DA RV
Sbjct: 294 RNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRV 353
Query: 65 FDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMIAGYAE 116
D M E N N+++ G ++G L A +F + ++ ++N ++ GY
Sbjct: 354 HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR 413
Query: 117 NGAMDEARALFDQMEFRNVI----TWTSMISGYCRAG 149
G +DEA L DQM + V+ T+ ++ GY R G
Sbjct: 414 AGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Score = 79.3 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 55/169 (32%), Positives = 93/169 (55%), Gaps = 20/169 (11%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP-----ERNVVSWTAMLGGYADAGR 57
F+V P ++ TC+ +++ Y +SG +D+A F + E NVV++ +++ GYA G
Sbjct: 219 FEVSP--DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 58 VEDARRVFDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS----WNV 109
VE RV +M E +NVV++ +++ G + G +E A VFE + +V+ + V
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 110 MIAGYAENGAMDEARALFDQMEFRNVITWT----SMISGYCRAGN-VEA 153
++ GY G + +A + D M V T T S+I+GYC++G VEA
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQ----SGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF 65
N+VT N++++GY GM R E RNVV++T+++ GY G +E+A VF
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 66 DVMPEKNVVSWNAMVG----GLVRNGGLEGARMVFE---QTPCRTVVS-WNVMIAGYAEN 117
+++ EK +V+ M G G R G + A V + + RT + N +I GY ++
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 118 GAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAAYGL 157
G + EA +F +M ++ T+ +++ GYCRAG V+ A L
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKL 423
Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRVEDARRVF 65
N CN++++GY +SG L EA F M + ++ ++ ++ GY AG V++A ++
Sbjct: 365 NTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLC 424
Query: 66 DVMPEKNVV----SWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
D M +K VV ++N ++ G R G +++ R V +S + ++ +
Sbjct: 425 DQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKL 484
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
G +EA L++ + R + IT MISG C+ V A
Sbjct: 485 GDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRVEDARRVFDVM 68
T N ++ GY ++G +DEA + M ++ VV ++ +L GY+ G D ++ +M
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 69 PEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAM 120
++ V +S + ++ L + G A ++E R + ++ NVMI+G + +
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 121 DEARALFDQME-FR---NVITWTSMISGYCRAGNVEAAYGL 157
+EA+ + D + FR V T+ ++ GY + GN++ A+ +
Sbjct: 523 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 73/134 (54%), Gaps = 13/134 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM--PERNV---VSWTAMLGGYADAGRVEDARRV 64
N + N ++G ++G L++AR F + +R + ++T ++ G A AG + A +
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 65 FDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAE 116
D M K N+V++NA++ GL + G ++ A+ + + P + + +++N +I G +
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837
Query: 117 NGAMDEARALFDQM 130
+G + EA L ++M
Sbjct: 838 SGNVAEAMRLKEKM 851
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 11/133 (8%)
Query: 34 FESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGAR 93
++S+ E S T L A VE++ ++P N + +N + GL + G LE AR
Sbjct: 682 YQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVP--NNIVYNVAIAGLCKAGKLEDAR 739
Query: 94 MVFEQ--TPCRTV---VSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISG 144
+F + R + ++ ++I G A G +++A L D+M + N++T+ ++I G
Sbjct: 740 KLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKG 799
Query: 145 YCRAGNVEAAYGL 157
C+ GNV+ A L
Sbjct: 800 LCKLGNVDRAQRL 812
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 65/130 (50%), Gaps = 13/130 (10%)
Query: 41 NVVSWTAMLGGYADAGRVEDARRVF-DVMPEKNVV----SWNAMVGGLVRNGGLEGARMV 95
N + + + G AG++EDAR++F D++ + ++ ++ G G + A +
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 96 FEQTPCR----TVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCR 147
++ + +V++N +I G + G +D A+ L ++ + N IT+ ++I G +
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVK 837
Query: 148 AGNVEAAYGL 157
+GNV A L
Sbjct: 838 SGNVAEAMRL 847
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 79.3 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 90/170 (52%), Gaps = 18/170 (10%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVE 59
D +P ++VT N +++G+ ++ + + F M R N V++T ++ G+ A +
Sbjct: 375 DCLP--DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 60 DARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMI 111
+A+ VF M N++++N ++ GL +NG LE A +VFE + ++N+M
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 112 AGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G + G +++ LF + + +VI + +MISG+C+ G E AY L
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 91/176 (51%), Gaps = 20/176 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
LFD M R NIVT N++++G+ LDEA+ F M + +VV++ ++ G+
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVV 105
A +V D +F M + N V++ ++ G + + A+MVF+Q ++
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++N ++ G +NG +++A +F+ ++ ++ T+ M G C+AG VE + L
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 85/161 (52%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++ T ++++S G +A M ER NVV++ +++ +A G++ +A ++F
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
D M ++ N+V++N+++ G + L+ A+ +F + VV++N +I G+ +
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+ + LF M R N +T+T++I G+ +A + + A
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 79.3 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 93/176 (52%), Gaps = 20/176 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
+F++M + N+VT N ++ G+ ++ ++E F M +R N V++ ++ G
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VV 105
AG + A+++F M ++++++ ++ GL + G LE A +VFE +
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++N+MI G + G +++ LF + + NVI +T+MISG+CR G E A L
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 96/176 (54%), Gaps = 20/176 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
L+D M R +I T +++++G+ LDEA+ FE M + NVV++ ++ G+
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----V 105
A RVE+ +F M ++ N V++N ++ GL + G + A+ +F++ V +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++++++ G + G +++A +F+ ++ ++ T+ MI G C+AG VE + L
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
Query: 41 NVVSWTAMLGGYADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVF 96
NVV++ +++ + GR DA R+ M E+ NVV+++A++ V+ G L A ++
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 97 EQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQME----FRNVITWTSMISGYCRA 148
++ R++ +++ +I G+ + +DEA+ +F+ M F NV+T+ ++I G+C+A
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 149 GNVEAAYGL 157
VE L
Sbjct: 409 KRVEEGMEL 417
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
LF M R N VT N ++ G Q+G D A+ F+ M ++++++ +L G
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 54 DAGRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVV 105
G++E A VF+ + E ++ ++N M+ G+ + G +E +F + V+
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 106 SWNVMIAGYAENGAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAA 154
+ MI+G+ G +EA ALF +M+ N T+ ++I R G+ A+
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LF V R++ ++++ Y + G + AR F+ + ER+ VSW +M+ GY++AG +DA
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA 217
Query: 62 RRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAG 113
+F M E+ + + +M+G G L R++ E + + + +I+
Sbjct: 218 MDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISM 277
Query: 114 YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
Y + G +D AR +F+QM ++ + WT+MI+ Y + G A+ L
Sbjct: 278 YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKL 321
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 42/176 (23%)
Query: 17 MLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSW 76
++S Y + G LD AR F M +++ V+WTAM+ Y+ G+ +A ++F M EK VS
Sbjct: 274 LISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM-EKTGVSP 332
Query: 77 NA------------------------------------MVGGLV----RNGGLEGARMVF 96
+A + GLV + G +E A VF
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 392
Query: 97 EQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEF-RNVITWTSMISGYCRAGNV 151
E P + +WN MI YA G EA LFD+M + IT+ ++S AG V
Sbjct: 393 EAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLV 448
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 20/163 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT N+++S Y + GMLDEA M E+ +V ++T +L G+ AG+VE A +F
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQ------TPCRTVVSWNVMIAGYA 115
+ M + N+ ++NA + G +F++ +P +V+WN ++A +
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP--DIVTWNTLLAVFG 465
Query: 116 ENGAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAA 154
+NG E +F +M+ + T+ ++IS Y R G+ E A
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Score = 52.8 bits (125), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 35/153 (22%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
T N +++ + + EA FE M + V++ A+L Y + R ++A +V + M
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 69 PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFD 128
V NG +P ++V++N +I+ YA +G +DEA L +
Sbjct: 341 ---------------VLNGF----------SP--SIVTYNSLISAYARDGMLDEAMELKN 373
Query: 129 QMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
QM + +V T+T+++SG+ RAG VE+A +
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 97/173 (56%), Gaps = 16/173 (9%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAG 56
++ D P N+VT +++G+ + G +D A F+ M +R + ++++ ++ GY AG
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 57 RVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWN 108
+ ++F K +VV +++ + V++G L A +V+++ C+ VV++
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 109 VMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++I G ++G + EA ++ Q+ R +++T++S+I G+C+ GN+ + + L
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Score = 67.4 bits (163), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT N M+ GY LDEA FE + N V+ T ++ ++ A R+F
Sbjct: 606 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 665
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
+M EK N V++ ++ ++ +EG+ +FE+ + ++VS++++I G +
Sbjct: 666 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 725
Query: 118 GAMDEARALF----DQMEFRNVITWTSMISGYCRAGN-VEAA 154
G +DEA +F D +V+ + +I GYC+ G VEAA
Sbjct: 726 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 767
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRVEDARRVF 65
++V ++ + Y++SG L A ++ M NVV++T ++ G GR+ +A ++
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 66 DVM----PEKNVVSWNAMVGGLVRNGGLEGARMVFEQT------PCRTVVSWNVMIAGYA 115
+ E ++V++++++ G + G L ++E P VV + V++ G +
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP--DVVIYGVLVDGLS 472
Query: 116 ENG----AMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ G AM + + Q NV+ + S+I G+CR + A
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 40/184 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGG------ 51
+FD MP ++++ N+++SGY+QSG E F + +V S+TA L
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHL 171
Query: 52 ------------------------------YADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
Y G ++DA VF M EK+ VSWNA+V
Sbjct: 172 SPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVA 231
Query: 82 GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSM 141
RNG LE F Q P V++N +I + ++G + A + M N +W ++
Sbjct: 232 SCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTI 291
Query: 142 ISGY 145
++GY
Sbjct: 292 LTGY 295
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+V N ++ Y + G +D+A F+ M E++ VSW A++ + G++E F MP
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP 250
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
+ V++N ++ V++G A V P SWN ++ GY + EA F +
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 130 ME 131
M
Sbjct: 311 MH 312
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 81/186 (43%), Gaps = 40/186 (21%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF---- 65
N N+++ Y S L++A F+ MP+ +V+SW +++ GY +GR ++ +F
Sbjct: 89 NTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELH 148
Query: 66 --DVMPEK----------------------------------NVVSWNAMVGGLVRNGGL 89
DV P + NVV N ++ + G +
Sbjct: 149 RSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFM 208
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
+ A +VF+ + VSWN ++A + NG ++ F QM + +T+ +I + ++G
Sbjct: 209 DDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSG 268
Query: 150 NVEAAY 155
+ A+
Sbjct: 269 DFNNAF 274
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 41/197 (20%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
++F M ++ V+ NA+++ ++G L+ WFF MP + V++ ++ + +G +
Sbjct: 213 LVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNN 272
Query: 61 ARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ---------------------- 98
A +V MP N SWN ++ G V + A F +
Sbjct: 273 AFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAA 332
Query: 99 ------------------TPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTS 140
R VV+ + +I Y++ G + A +F M +N+I W
Sbjct: 333 LAVVPWGSLIHACAHKLGLDSRVVVA-SALIDMYSKCGMLKHAELMFWTMPRKNLIVWNE 391
Query: 141 MISGYCRAGNVEAAYGL 157
MISGY R G+ A L
Sbjct: 392 MISGYARNGDSIEAIKL 408
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 39/169 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
F MP+ + VT N ++ +++SG + A MP N SW +L GY ++ + +A
Sbjct: 245 FFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEA 304
Query: 62 RRVFDVMP---------------------------------------EKNVVSWNAMVGG 82
F M + VV +A++
Sbjct: 305 TEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDM 364
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME 131
+ G L+ A ++F P + ++ WN MI+GYA NG EA LF+Q++
Sbjct: 365 YSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLK 413
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 79.0 bits (193), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 97/173 (56%), Gaps = 16/173 (9%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAG 56
++ D P N+VT +++G+ + G +D A F+ M +R + ++++ ++ GY AG
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 57 RVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWN 108
+ ++F K +VV +++ + V++G L A +V+++ C+ VV++
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 109 VMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++I G ++G + EA ++ Q+ R +++T++S+I G+C+ GN+ + + L
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Score = 67.4 bits (163), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT N M+ GY LDEA FE + N V+ T ++ ++ A R+F
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
+M EK N V++ ++ ++ +EG+ +FE+ + ++VS++++I G +
Sbjct: 695 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 754
Query: 118 GAMDEARALF----DQMEFRNVITWTSMISGYCRAGN-VEAA 154
G +DEA +F D +V+ + +I GYC+ G VEAA
Sbjct: 755 GRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRVEDARRVF 65
++V ++ + Y++SG L A ++ M NVV++T ++ G GR+ +A ++
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 66 DVM----PEKNVVSWNAMVGGLVRNGGLEGARMVFEQT------PCRTVVSWNVMIAGYA 115
+ E ++V++++++ G + G L ++E P VV + V++ G +
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP--DVVIYGVLVDGLS 472
Query: 116 ENG----AMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ G AM + + Q NV+ + S+I G+CR + A
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 78.6 bits (192), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
LFD P R++VT N ++ G +++ + AR F+SMP R++VSW +++ GYA +A
Sbjct: 174 LFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREA 233
Query: 62 RRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG---- 113
++FD M + + V+ + + ++G + + + + T + + + + G
Sbjct: 234 IKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDF 293
Query: 114 YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVE 152
YA+ G +D A +F+ + + TW +MI+G GN E
Sbjct: 294 YAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGE 332
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
Y+ ++ A ++FD P+++VV++N ++ GLV+ + AR +F+ P R +VSWN +I
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 112 AGYAENGAMDEARALFDQM 130
+GYA+ EA LFD+M
Sbjct: 222 SGYAQMNHCREAIKLFDEM 240
Score = 65.5 bits (158), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 48/201 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM------PERNVV-----------S 44
LFD MP R++V+ N+++SGY Q EA F+ M P+ +
Sbjct: 205 LFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGD 264
Query: 45 W----------------------TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
W T ++ YA G ++ A +F++ +K + +WNAM+ G
Sbjct: 265 WQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITG 324
Query: 83 LVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQMEF-----R 133
L +G E F + + V++ ++ G + +G +DEAR LFDQM R
Sbjct: 325 LAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNR 384
Query: 134 NVITWTSMISGYCRAGNVEAA 154
+ + M RAG +E A
Sbjct: 385 EMKHYGCMADLLGRAGLIEEA 405
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 89 LEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRA 148
++ A +F++ P R VV++NV+I G + + AR LFD M R++++W S+ISGY +
Sbjct: 168 IDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQM 227
Query: 149 GNVEAAYGL 157
+ A L
Sbjct: 228 NHCREAIKL 236
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 8/146 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N ML Y+ G L EA F M +VV+W +M+ G+A G ++ A+ +FD MP++N V
Sbjct: 165 NTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGV 224
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQM 130
SWN+M+ G VRNG + A +F + + V + ++ A GA ++ R + + +
Sbjct: 225 SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYI 284
Query: 131 ---EFR-NVITWTSMISGYCRAGNVE 152
F N I T++I YC+ G +E
Sbjct: 285 VRNRFELNSIVVTALIDMYCKCGCIE 310
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 43/188 (22%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++V N+M+ G+ + G++D+A+ F+ MP+RN VSW +M+ G+ GR +DA +F M
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 70 EKNV---------------------------------------VSWNAMVGGLVRNGGLE 90
EK+V + A++ + G +E
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 91 GARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYC 146
VFE P + + WN MI G A NG + A LF ++E + +++ +++
Sbjct: 311 EGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACA 370
Query: 147 RAGNVEAA 154
+G V A
Sbjct: 371 HSGEVHRA 378
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 89/233 (38%), Gaps = 80/233 (34%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV------------------- 42
LFD MP RN V+ N+M+SG++++G +A F M E++V
Sbjct: 214 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGA 273
Query: 43 --------------------VSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
+ TA++ Y G +E+ VF+ P+K + WN+M+ G
Sbjct: 274 SEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILG 333
Query: 83 LVRNGGLEGARMVFEQ-----------------TPC-----------------------R 102
L NG E A +F + T C
Sbjct: 334 LANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEP 393
Query: 103 TVVSWNVMIAGYAENGAMDEARALFDQMEF-RNVITWTSMISGYCRAGNVEAA 154
++ + +M+ G ++EA AL M + + W+S++S + GNVE A
Sbjct: 394 SIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAG 56
+LFD M N++ NAM+SGY ++G EA F M ++V +S T+ + A G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 57 RVEDARRVFDVMPEKN----VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
+E AR +++ + + V +A++ + G +EGAR+VF++T R VV W+ MI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 113 GYAENGAMDEARALFDQME 131
GY +G EA +L+ ME
Sbjct: 398 GYGLHGRAREAISLYRAME 416
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
+++ N M Y + G + A+ F+ M N++ W AM+ GYA G +A +F M
Sbjct: 260 LISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 71 KNV----VSWNAMVGGLVRNGGLEGARMVFE---QTPCR-TVVSWNVMIAGYAENGAMDE 122
K+V +S + + + G LE AR ++E ++ R V + +I +A+ G+++
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 123 ARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
AR +FD+ R+V+ W++MI GY G A L
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
+FD +P I NA++ GY ++ +A + +M V ++ +L +
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134
Query: 58 VEDAR----RVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC--RTVVSWNVMI 111
++ R +VF + + +V N ++ + L AR VFE P RT+VSW ++
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 112 AGYAENGAMDEARALFDQMEFRNVIT-WTSMIS 143
+ YA+NG EA +F QM +V W +++S
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVS 227
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 40/185 (21%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+ V ++ Y++ L+ AR F+ +++ SWT+ + GYA +G +AR +FD+MP
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 70 EKNVVSWNAMVGGLVRN--------------------------------GGLEGARM--- 94
E+N+VSWNAM+GG V G+ +M
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 95 ----VFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM-EFRNVITWTSMISGYCRAG 149
++ V+ N ++ Y + G + A F QM E R+ ++W ++++G R G
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVG 476
Query: 150 NVEAA 154
E A
Sbjct: 477 RSEQA 481
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGY--------- 52
+FD + + + V+ N ++ YL+ G DEA F M E NV +
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 53 ADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
+ G+V A V + VVS ++ V+ LE AR VF+QT + + SW ++
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVS-TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMS 337
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMISGYCRA 148
GYA +G EAR LFD M RN+++W +M+ GY A
Sbjct: 338 GYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHA 373
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 32/168 (19%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPE-RNVVSWTAMLGGYADAGRVEDARRVFDVM 68
N++ NA+L Y + G L A +F M E R+ VSW A+L G A GR E A F+ M
Sbjct: 429 NVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM 488
Query: 69 -----PEK-----------NVVSWN---AMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV 109
P K N+ + N A+ G L+R+G VV
Sbjct: 489 QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKID------------VVIRGA 536
Query: 110 MIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
M+ Y++ D A +F + R++I W S+I G CR G + + L
Sbjct: 537 MVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFEL 584
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 7 PHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFD 66
P I N + Y + G +D+AR FE MPER+ SW A++ A G ++ R+F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 67 VMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV---VSWNV-----MIAGYAENG 118
M V + G++++ GL + Q C V S NV ++ Y +
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 119 AMDEARALFDQMEFRNVITWTSMISGYCRAG 149
M +AR +FD++ + ++W ++ Y G
Sbjct: 212 VMSDARRVFDEIVNPSDVSWNVIVRRYLEMG 242
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ +++ Y + ++ +AR F+ + + VSW ++ Y + G ++A +F M
Sbjct: 196 NVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML 255
Query: 70 EKNVVSWNAMVGGLV----RNGGLEGARMVFEQTPCRTVVSWNVMIAG----YAENGAMD 121
E NV N V ++ R+ LE +++ +VV+ V+ Y + ++
Sbjct: 256 ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLE 315
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
AR +FDQ +++ +WTS +SGY +G A L
Sbjct: 316 SARRVFDQTRSKDLKSWTSAMSGYAMSGLTREAREL 351
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
Query: 33 FFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGA 92
FF S E + T ++ YA G + ARRVFD M +++V WNAM+ G R G ++ A
Sbjct: 108 FFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAA 167
Query: 93 RMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR-----NVITWTSMISGYCR 147
+F+ P + V SW +I+G+++NG EA +F ME N IT S++
Sbjct: 168 MELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACAN 227
Query: 148 AGNVE 152
G +E
Sbjct: 228 LGELE 232
Score = 76.3 bits (186), Expect = 8e-15, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD M R++ NAM++GY + G + A F+SMP +NV SWT ++ G++ G +A
Sbjct: 139 VFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEA 198
Query: 62 RRVFDVMPEKNVVSWN-----------AMVGGLVRNGGLEG-ARMVFEQTPCRTVVSWNV 109
++F M + V N A +G L LEG AR E + N
Sbjct: 199 LKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAR---ENGFFDNIYVCNA 255
Query: 110 MIAGYAENGAMDEARALFDQM-EFRNVITWTSMISGYCRAGNVEAAYGL 157
I Y++ G +D A+ LF+++ RN+ +W SMI G + A L
Sbjct: 256 TIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTL 304
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 44/85 (51%)
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
E + ++ + G L AR VF++ R V WN MI GY G M A LFD
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 130 MEFRNVITWTSMISGYCRAGNVEAA 154
M +NV +WT++ISG+ + GN A
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEA 198
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERN----VVSWTAMLGGYADAGRVEDARRVF 65
N+ T N ML G+ ++G + A FF M +R+ VV++T ++ G+ AG ++ AR VF
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
D M + +V ++NAM+ L + +E A ++FE+ R V ++NV+I G
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G L +ME N T+ MI Y VE A GL
Sbjct: 349 GEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 91/172 (52%), Gaps = 15/172 (8%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAG 56
+L D + N+ T N M+SG + G +D+ +E M E+++ ++++++ G DAG
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 57 RVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGAR---MVFEQTPCRTVVSWNV 109
V+ A VF+ + E+ +VV++N M+GG R G ++ + + E +VS+N+
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNI 364
Query: 110 MIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+I G ENG +DEA ++ M + + T+ I G C G V A G+
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 88/164 (53%), Gaps = 15/164 (9%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRV 64
+++ T ++++ G +G +D+A F + ER +VV++ MLGG+ G+++++ +
Sbjct: 288 KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL 347
Query: 65 FDVMPEKN---VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
+ +M KN +VS+N ++ GL+ NG ++ A M++ P + ++ + I G N
Sbjct: 348 WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G +++A + ++E +V + S+I C+ +E A L
Sbjct: 408 GYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNL 451
Score = 63.2 bits (152), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 89/162 (54%), Gaps = 17/162 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+ T N ++ + ++AR F + M + +V S++ ++ A AG+++DA +F
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF 207
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGA-----RMVFEQTPCRTVVSWNVMIAGYAE 116
D M E+ +V +N ++ G ++ + A R++ + + V + N+MI+G ++
Sbjct: 208 DEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSK 267
Query: 117 NGAMDEARALFDQMEF----RNVITWTSMISGYCRAGNVEAA 154
G +D+ ++++M+ +++ T++S+I G C AGNV+ A
Sbjct: 268 CGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N CNA++ G ++ L EA +F M + VVS+ ++ G AG+ +A
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFV 522
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMV---FEQTPCRT-VVSWNVMIAGYAEN 117
M E ++ +++ ++ GL R+ ++ A + F Q+ T V+ N++I G
Sbjct: 523 KEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSV 582
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
G +D+A + ME R N++T+ +++ G+ + G+ A
Sbjct: 583 GKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 78.6 bits (192), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 88/160 (55%), Gaps = 15/160 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAM----LGGYADAGRVEDARRVF 65
N++T NA+++G+ ++ ML EA F S+ + V T M + Y G+++D +
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 66 DVMPEKNVV----SWNAMVGGLVRNGGLEGARMVFEQTPCR---TVVSWNVMIAGYAENG 118
+ M + +V ++N ++ GL RNG +E A+ +F+Q + +V++++++ GY G
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKG 484
Query: 119 AMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAA 154
+A L +M + +T+ ++ GYC+ GN++AA
Sbjct: 485 ESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 19/157 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAG---RVEDAR 62
N+ T N +++ ++G +++AR E M NVVS+ ++ GY G ++ A
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 63 RVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAGY 114
V M E N+ ++N ++ G ++ L G+ VF +Q V+S+N +I G
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 115 AENGAMDEARALFDQMEFR----NVITWTSMISGYCR 147
G + EA ++ D+M N+IT+ ++I+G+C+
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
Score = 54.3 bits (129), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 19/165 (11%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDV 67
++C ++ L+ + + ++ M R NV ++ ++ G++ AR V +
Sbjct: 189 LSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMED 248
Query: 68 MP----EKNVVSWNAMVGGLVR---NGGLEGARMVF----EQTPCRTVVSWNVMIAGYAE 116
M NVVS+N ++ G + NG + A V E + ++N++I G+ +
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 117 N----GAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ G+M + + DQ NVI++ S+I+G C G + A +
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER---NVVSWTAMLGGYADAGRVEDARRVFD 66
++ T N +++G ++G ++ A+ F+ + + ++V++ ++ GY G A +
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLK 494
Query: 67 VMPEKNV----VSWNAMVGGLVRNGGLEGA-----RMVFEQTPCRTVVSWNVMIAGYAEN 117
M + + +++N ++ G + G L+ A +M E+ V S+NV++ GY++
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554
Query: 118 GAMDEARALFDQM 130
G +++A L ++M
Sbjct: 555 GKLEDANMLLNEM 567
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 78.2 bits (191), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 8 HRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDV 67
+ ++ ++LS Y SG L++A F+ +P+R+VV+WTA+ GY +GR +A +F
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 68 MPEKNVVSWNAMV----GGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAENGA 119
M E V + + V G L+ + E + ++ YA+ G
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 120 MDEARALFDQMEFRNVITWTSMISGY 145
M++AR++FD M ++++TW++MI GY
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGY 288
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 78/234 (33%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGM----------------------------------- 26
LFD +P R++VT A+ SGY SG
Sbjct: 168 LFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGD 227
Query: 27 LDEARWFFESMPE----RNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
LD W + M E +N T ++ YA G++E AR VFD M EK++V+W+ M+ G
Sbjct: 228 LDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQG 287
Query: 83 LVRNG----GLEGARMVFEQ-------------TPCRTVVS-----W------------- 107
N G+E + ++ + C ++ + W
Sbjct: 288 YASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTN 347
Query: 108 ----NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
N +I YA+ GAM +F +M+ ++++ + ISG + G+V+ ++ +
Sbjct: 348 LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFD--- 66
N+ NA++ Y + G + F+ M E+++V A + G A G V+ + VF
Sbjct: 347 NLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTE 406
Query: 67 ---VMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC-----RTVVSWNVMIAGYAENG 118
+ P+ + ++ ++ G V G ++ F C RTV + M+ + G
Sbjct: 407 KLGISPDGS--TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464
Query: 119 AMDEARALFDQMEFR-NVITWTSMISGYCR 147
+D+A L M R N I W +++SG CR
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSG-CR 493
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 78.2 bits (191), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N+++ Y G + A F M R+VVSWT+M+ GY G VE+AR +FD MP +N+
Sbjct: 156 NSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLF 215
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV----MIAGYAENGAMDEARALFDQM 130
+W+ M+ G +N E A +FE VV+ +I+ A GA++ ++ +
Sbjct: 216 TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYV 275
Query: 131 EFR----NVITWTSMISGYCRAGNVEAA 154
N+I T+++ + R G++E A
Sbjct: 276 VKSHMTVNLILGTALVDMFWRCGDIEKA 303
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 43/194 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+F M R++V+ +M++GY + GM++ AR F+ MP RN+ +W+ M+ GYA E A
Sbjct: 174 IFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKA 233
Query: 62 RRVFDVMPEKNVVS---------------------------------------WNAMVGG 82
+F+ M + VV+ A+V
Sbjct: 234 IDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDM 293
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVI----TW 138
R G +E A VFE P +SW+ +I G A +G +A F QM I T+
Sbjct: 294 FWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTF 353
Query: 139 TSMISGYCRAGNVE 152
T+++S G VE
Sbjct: 354 TAVLSACSHGGLVE 367
Score = 66.6 bits (161), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 49/88 (55%)
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
+ +V N++V G + A +F Q R VVSW M+AGY + G ++ AR +FD+
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 130 MEFRNVITWTSMISGYCRAGNVEAAYGL 157
M RN+ TW+ MI+GY + E A L
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDL 236
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+ T ++++ G +DEA + M + NVV+++ + G+ + RV+D ++
Sbjct: 152 NVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLL 211
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMIAGYAEN 117
D MP++ N VS N ++ G + G ++ A VF ++ S+N+++AG N
Sbjct: 212 DDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFAN 271
Query: 118 GAMDEARALFDQME-FRN---VITWTSMISGYCRAGNVEAAYGL 157
G +++A + F+ M+ RN +IT+T MI G C+A V+ AY L
Sbjct: 272 GEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDL 315
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 8 HRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARR 63
R++V ++ ++ ++ A + M +R NVV++++++ G +GR+ DA R
Sbjct: 45 KRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAER 104
Query: 64 VFDVMPEK----NVVSWNAMVGGLVRNGGLEGA----RMVFEQTPCRTVVSWNVMIAGYA 115
M K NV++++A++ + G L +M+ + + V +++ +I G
Sbjct: 105 RLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLC 164
Query: 116 ENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+ +DEA + D M + NV+T++++ +G+ ++ V+ L
Sbjct: 165 MHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKL 210
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 77.4 bits (189), Expect = 3e-15, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 49/202 (24%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGM-LDEARWFFESMPE--------------------- 39
+F MPH ++ + N M+ GY + G L+ + +F+ + +
Sbjct: 188 VFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSD 247
Query: 40 -------------------RNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMV 80
N++ A+L Y A+R FD M +K++ SWN MV
Sbjct: 248 IRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMV 307
Query: 81 GGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA-MDEARALFDQMEF-----RN 134
G VR G +E A+ VF+Q P R +VSWN ++ GY++ G R LF +M +
Sbjct: 308 VGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPD 367
Query: 135 VITWTSMISGYCRAGNVEAAYG 156
+T S+ISG A N E ++G
Sbjct: 368 RVTMVSLISG--AANNGELSHG 387
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N++ NA+L Y + A+ F++M ++++ SW M+ G+ G +E A+ VFD MP
Sbjct: 268 NLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP 327
Query: 70 EKNVVSWNAMVGGLVRNGGLEGA--RMVFEQTPCRTV----VSWNVMIAGYAENGAMDEA 123
++++VSWN+++ G + G + + +E T V V+ +I+G A NG +
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 124 R---ALFDQMEFR-NVITWTSMISGYCRAGNVEAAY 155
R L +++ + + +++I YC+ G +E A+
Sbjct: 388 RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF 423
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 16/168 (9%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDAR 62
FD M +++ + N M+ G+++ G ++ A+ F+ MP+R++VSW ++L GY+ G D R
Sbjct: 292 FDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGC--DQR 349
Query: 63 RVFDVMPEKNV--------VSWNAMVGGLVRNGGLEGARMVFE-----QTPCRTVVSWNV 109
V ++ E + V+ +++ G NG L R V Q +S +
Sbjct: 350 TVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS-SA 408
Query: 110 MIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+I Y + G ++ A +F ++V WTSMI+G GN + A L
Sbjct: 409 LIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQL 456
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEA-RWFFESM-------PERNVVSWTAMLGGYA 53
+FD MP R++V+ N++L GY + G R F M P+R V+ +++ G A
Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDR--VTMVSLISGAA 379
Query: 54 DAGRVEDAR----RVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV 109
+ G + R V + + + +A++ + G +E A MVF+ + V W
Sbjct: 380 NNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTS 439
Query: 110 MIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
MI G A +G +A LF +M+ V +T ++++ +G VE
Sbjct: 440 MITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVE 486
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 5 VMPHRNIVTCNAMLSGYLQSGMLDEARWF----FESMPERNVVSWTAMLGGYADAGRVED 60
V P R VT +++SG +G L RW + + +A++ Y G +E
Sbjct: 364 VKPDR--VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIER 421
Query: 61 ARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV----MIAGYAE 116
A VF EK+V W +M+ GL +G + A +F + V NV ++ +
Sbjct: 422 AFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSH 481
Query: 117 NGAMDEARALFDQMEFR-----NVITWTSMISGYCRAGNVEAA 154
+G ++E +F+ M+ + + S++ CRAG VE A
Sbjct: 482 SGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEA 524
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 39/179 (21%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
NA+++ Y G +D A F SM R+V+SWT+++ GY + G ++ AR FD MP ++ +
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQ-----------------TPC---------------- 101
SW M+ G +R G + +F + T C
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 102 ------RTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
VV N +I Y + G ++A+ +F M+ R+ TWT+M+ G G + A
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEA 453
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 76/180 (42%), Gaps = 41/180 (22%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ NA++ Y G++D AR F+ + +V SW M+ GY E++ + M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM- 227
Query: 70 EKNVVS----------------------------------------WNAMVGGLVRNGGL 89
E+N+VS NA+V G +
Sbjct: 228 ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
+ A +F R V+SW ++ GY E G + AR FDQM R+ I+WT MI GY RAG
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 48/201 (23%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP------------------------ 38
FD MP R+ ++ M+ GYL++G +E+ F M
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 39 ---------------ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGL 83
+ +VV A++ Y G E A++VF M +++ +W AMV GL
Sbjct: 385 EIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGL 444
Query: 84 VRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQMEFRN----- 134
NG + A VF Q ++ +++ +++ +G +D+AR F +M +
Sbjct: 445 ANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPS 504
Query: 135 VITWTSMISGYCRAGNVEAAY 155
++ + M+ RAG V+ AY
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAY 525
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF---- 65
++V NA++ Y + G ++A+ F M +R+ +WTAM+ G A+ G+ ++A +VF
Sbjct: 402 DVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQ 461
Query: 66 DVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR-----TVVSWNVMIAGYAENGAM 120
D+ + + +++ ++ +G ++ AR F + ++V + M+ G +
Sbjct: 462 DMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLV 521
Query: 121 DEARALFDQMEFR-NVITWTSMISGYCRAGNVE 152
EA + +M N I W +++ G R N E
Sbjct: 522 KEAYEILRKMPMNPNSIVWGALL-GASRLHNDE 553
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 25 GMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV----SWNAMV 80
G + A F +PE +VV W M+ G++ + R++ M ++ V ++ ++
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 81 GGLVRNGGLEGARMVFEQTPCRTV--------VSWNVMIAGYAENGAMDEARALFDQMEF 132
GL R+GG A ++ C V N ++ Y+ G MD AR +FD+
Sbjct: 142 NGLKRDGG---ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCK 198
Query: 133 RNVITWTSMISGYCRAGNVEAAYGL 157
+V +W MISGY R E + L
Sbjct: 199 EDVFSWNLMISGYNRMKEYEESIEL 223
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 77.4 bits (189), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+I +++L Y ++G + EAR FE +PER+VVS TA++ GYA G E+A +F +
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH 246
Query: 70 EK----NVVSWNAMVG-----GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
+ N V++ +++ L+ +G ++ + P V+ N +I Y++ G +
Sbjct: 247 SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ-NSLIDMYSKCGNL 305
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAG 149
AR LFD M R I+W +M+ GY + G
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHG 334
Score = 69.3 bits (168), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 18/151 (11%)
Query: 17 MLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM----PEKN 72
+L Y + L++AR + MPE+NVVSWTAM+ Y+ G +A VF M + N
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPN 152
Query: 73 VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV---------MIAGYAENGAMDEA 123
++ ++ +R GL + + +V WN ++ YA+ G + EA
Sbjct: 153 EFTFATVLTSCIRASGLGLGKQIHG-----LIVKWNYDSHIFVGSSLLDMYAKAGQIKEA 207
Query: 124 RALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
R +F+ + R+V++ T++I+GY + G E A
Sbjct: 208 REIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N+++ Y + G L AR F++MPER +SW AML GY+ G + +F +M ++ V
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 75 SWNAM 79
+A+
Sbjct: 353 KPDAV 357
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 14 CNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK-- 71
CN +L Y + G LD A+ F M +R+VVS+T+M+ GYA G +A ++F+ M E+
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 72 --NVVSWNAMVGGLVRNGGL-EGARM---VFEQTPCRTVVSWNVMIAGYAENGAMDEARA 125
+V + A++ R L EG R+ + E + N ++ YA+ G+M EA
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 126 LFDQMEFRNVITWTSMISGYCR 147
+F +M +++I+W ++I GY +
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSK 475
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM----PE 70
N++++ YL++ +D AR F+ M ER+V+SW +++ GY G E VF M E
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 71 KNVVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAENGAMDEARAL 126
++ + ++ G + + R V + R N ++ Y++ G +D A+A+
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 127 FDQMEFRNVITWTSMISGYCRAG 149
F +M R+V+++TSMI+GY R G
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREG 376
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 44/187 (23%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM- 68
+I NA++ Y + G + EA F M ++++SW ++GGY+ +A +F+++
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 69 ------PEKNVVSW---------------------------------NAMVGGLVRNGGL 89
P++ V+ N++V + G L
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGY 145
A M+F+ + +VSW VMIAGY +G EA ALF+QM + I++ S++
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 146 CRAGNVE 152
+G V+
Sbjct: 611 SHSGLVD 617
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGR 57
+FD M R++++ N++++GY+ +G+ ++ F M E ++ + ++ G AD+
Sbjct: 252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 311
Query: 58 VEDARRVFDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+ R V + + + N ++ + G L+ A+ VF + R+VVS+ MIAG
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 114 YAENGAMDEARALFDQME 131
YA G EA LF++ME
Sbjct: 372 YAREGLAGEAVKLFEEME 389
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 47 AMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS 106
A++ Y G V + +R+F+ + EK+VVSW ++ +V+ GLE R VF + P R V+
Sbjct: 151 ALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVA 210
Query: 107 WNVMIAGYAENGAMDEARALFDQMEFR-----NVITWTSMISGYCRAGNV 151
W VM+AGY G E L +M FR N +T SM+S ++GN+
Sbjct: 211 WTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNL 260
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ CNA++ Y + G++ E + FE + E++VVSWT +L +E R VF MP
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 70 EKNVVSWNAMVGGLVRNGGLEG-----ARMVFEQTPCRTVVSWNVMIAGYAENG------ 118
E+N V+W MV G + G A MVF V+ M++ A++G
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 119 -----AMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
A+ + + ++ + +V+ T+++ Y + GN++++
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSS 305
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED- 60
+F+ + +++V+ +L ++ L+ R F MPERN V+WT M+ GY AG +
Sbjct: 168 IFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREV 227
Query: 61 ----ARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGAR-----------MVFEQTPCRTVV 105
A VF N V+ +M+ ++G L R M+ E+ V+
Sbjct: 228 LELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVM 287
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGN 150
++ YA+ G +D + +F M RNV+TW ++ SG G
Sbjct: 288 VGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGK 332
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 77.0 bits (188), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 19/167 (11%)
Query: 5 VMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVED 60
+MP N++T NA+++GY + GM+++A E M R N ++ ++ GY + V
Sbjct: 389 LMP--NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHK 445
Query: 61 ARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMIA 112
A V + M E+ +VV++N+++ G R+G + A + R +V ++ MI
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 113 GYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAY 155
++ ++EA LFD +E + NV+ +T++I GYC+AG V+ A+
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 24/172 (13%)
Query: 2 LFDVMPHRNIV----TCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
L +M R +V T +M+ +S ++EA F+S+ ++ NVV +TA++ GY
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 54 DAGRVEDARRVFDVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQT------PCRT 103
AG+V++A + + M KN +++NA++ GL +G L+ A ++ E+ P T
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP--T 601
Query: 104 VVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNV 151
V + ++I ++G D A + F QM + T+T+ I YCR G +
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 41 NVVSWTAMLGGYADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVF 96
N+ ++T ++ + E AR + M EK NV+++NA++ G + G +E A V
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 97 EQTPCRTVV----SWNVMIAGYAENG---AMDEARALFDQMEFRNVITWTSMISGYCRAG 149
E R + ++N +I GY ++ AM + ++ +V+T+ S+I G CR+G
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 150 NVEAAYGL 157
N ++AY L
Sbjct: 477 NFDSAYRL 484
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
NI T ++ ++AR M E+ NV+++ A++ GY G +EDA V
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 66 DVMPEK----NVVSWNAMVGGLVRNG---GLEGARMVFEQTPCRTVVSWNVMIAGYAENG 118
++M + N ++N ++ G ++ + + E+ VV++N +I G +G
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 119 AMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAAYGL 157
D A L M R ++ T+TSMI C++ VE A L
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 51/196 (26%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
NI T N M++GY + G ++EA + + E + ++T+++ GY ++ A +VF
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVF------------------------- 96
+ MP +N V++ ++ GL ++ A +F
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 97 -------------EQTPCR-TVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITW 138
E+T + + ++ V+I ++AR L QM + NVIT+
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 139 TSMISGYCRAGNVEAA 154
++I+GYC+ G +E A
Sbjct: 397 NALINGYCKRGMIEDA 412
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 77.0 bits (188), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 22/177 (12%)
Query: 2 LFDVMPHRNI----VTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
L + M R+I +T N +++G+ LDEA+ F+ M + N+ ++ ++ G+
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----V 105
RVED +F M ++ N V++ ++ G + G + A+MVF+Q V +
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 106 SWNVMIAGYAENGAMDEARALF-----DQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
++++++ G G +D A +F +ME N+ + +MI G C+AG V A+ L
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMEL-NIFIYNTMIEGMCKAGKVGEAWDL 525
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
N+VT NA++ + + G L EA E M +R++ +++ ++ G+ R+++A+++F
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
M K N+ ++N ++ G + +E +F + R V++ +I G+ +
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
G D A+ +F QM +++T++ ++ G C G ++ A
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVE 59
D +P NI T N +++G+ + +++ F M +R N V++T ++ G+ AG +
Sbjct: 393 DCLP--NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 60 DARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMI 111
A+ VF M ++++++ ++ GL G L+ A ++F+ + +N MI
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 112 AGYAENGAMDEARALFDQMEFR-NVITWTSMISGYC 146
G + G + EA LF + + +V+T+ +MISG C
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC 546
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
LF M R N VT ++ G+ Q+G D A+ F+ M ++++++ +L G
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 54 DAGRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR-TVVSWN 108
G+++ A +F + E N+ +N M+ G+ + G + A +F + VV++N
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYN 539
Query: 109 VMIAGYAENGAMDEARALFDQME----FRNVITWTSMISGYCR 147
MI+G + EA LF +M+ N T+ ++I R
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 77.0 bits (188), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 87/160 (54%), Gaps = 12/160 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++V +A++ + G +A++ F M E+ NV ++ M+ G+ GR DA+R+
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
M E+ +V+++NA++ V+ G L A + ++ R + V++N MI G+ ++
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 118 GAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
D+A+ +FD M +V+T+ ++I YCRA V+ L
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQL 454
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 2 LFDVMPHRNI----VTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGR 57
L D M HR I VT N+M+ G+ + D+A+ F+ M +VV++ ++ Y A R
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 58 VEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQT----PCRTVVSWNV 109
V++ ++ + + N ++N ++ G L A+ +F++ C ++ N+
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 110 MIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
++ G+ EN ++EA LF+ ++ + + + +I G C+ V+ A+ L
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
N T N ++ G+ + L+ A+ F+ M V ++ +L G+ + ++E+A +F
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
+V+ + + V++N ++ G+ + ++ A +F P V ++NVMI+G+
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
A+ +A LF +M+ + T+ ++I G +AG ++ + L
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 77.0 bits (188), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 87/160 (54%), Gaps = 12/160 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++V +A++ + G +A++ F M E+ NV ++ M+ G+ GR DA+R+
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
M E+ +V+++NA++ V+ G L A + ++ R + V++N MI G+ ++
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 118 GAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
D+A+ +FD M +V+T+ ++I YCRA V+ L
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQL 454
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 86/172 (50%), Gaps = 16/172 (9%)
Query: 2 LFDVMPHRNI----VTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGR 57
L D M HR I VT N+M+ G+ + D+A+ F+ M +VV++ ++ Y A R
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 58 VEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQT----PCRTVVSWNV 109
V++ ++ + + N ++N ++ G L A+ +F++ C ++ N+
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 110 MIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
++ G+ EN ++EA LF+ ++ + + + +I G C+ V+ A+ L
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
N T N ++ G+ + L+ A+ F+ M V ++ +L G+ + ++E+A +F
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
+V+ + + V++N ++ G+ + ++ A +F P V ++NVMI+G+
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
A+ +A LF +M+ + T+ ++I G +AG ++ + L
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 76.6 bits (187), Expect = 6e-15, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV- 73
+++++ Y + G+L AR FE M ER+VV WTAM+G Y+ AG V +A + + M + +
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 74 ---VSWNAMVGGLVRNGGLEGAR--MVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFD 128
V+ M+ G++ L+ V C V N M+ Y + + +A+ LFD
Sbjct: 145 PGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAV-MNSMLNLYCKCDHVGDAKDLFD 203
Query: 129 QMEFRNVITWTSMISGYCRAGNV 151
QME R++++W +MISGY GN+
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNM 226
Score = 66.2 bits (160), Expect = 8e-12, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDAR 62
FDV H A+++ YL+ G + + E++P ++VV WT M+ G GR E A
Sbjct: 276 FDVDMHLK----TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKAL 331
Query: 63 RVFDVMPEK----------NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
VF M + +VV+ A +G + G V + N +I
Sbjct: 332 IVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG--YVLRHGYTLDTPALNSLIT 389
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
YA+ G +D++ +F++M R++++W ++ISGY A NV+ L
Sbjct: 390 MYAKCGHLDKSLVIFERMNERDLVSWNAIISGY--AQNVDLCKAL 432
Score = 62.8 bits (151), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 75/140 (53%), Gaps = 9/140 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N++++ Y + G LD++ FE M ER++VSW A++ GYA + A +F+ M K V
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ 444
Query: 75 SWNAM-VGGLVRNGGLEGARMVFEQTPCRTVVSW--------NVMIAGYAENGAMDEARA 125
++ V L++ GA V + C + S+ ++ Y++ G ++ A+
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Query: 126 LFDQMEFRNVITWTSMISGY 145
FD + +++V++W +I+GY
Sbjct: 505 CFDSISWKDVVSWGILIAGY 524
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM- 68
+I N+ML+ Y + + +A+ F+ M +R++VSW M+ GYA G + + ++ M
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 69 -----PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW--------NVMIAGYA 115
P++ + V G + + LE RM+ C+ V + +I Y
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCD--LEMGRMLH----CQIVKTGFDVDMHLKTALITMYL 291
Query: 116 ENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ G + + + + + ++V+ WT MISG R G E A
Sbjct: 292 KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKA 330
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 76.6 bits (187), Expect = 6e-15, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 94/176 (53%), Gaps = 20/176 (11%)
Query: 2 LFDVMPHRNI----VTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYA 53
L++ M R I +T N+++ G+ + L EA F+ M E ++V+++ ++ Y
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVV 105
A RV+D R+F + K N +++N +V G ++G L A+ +F++ R +VV
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAAYGL 157
++ +++ G +NG +++A +F++M+ + + +I G C A V+ A+ L
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Score = 66.2 bits (160), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 90/171 (52%), Gaps = 20/171 (11%)
Query: 2 LFDVMPHRNI----VTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
LF M RNI V + ++ + G D+A F M + +VV++++++GG
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 54 DAGRVEDARRVFDVMPEKN----VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----V 105
+ G+ +D ++ M +N VV+++A++ V+ G L A+ ++ + R + +
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
++N +I G+ + + EA +FD M + +++T++ +I+ YC+A V+
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+ +T + +++G+ G + EA + M E ++V+ + ++ G GRV +A +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 66 DVMPE----KNVVSWNAMVGGLVRNG----GLEGARMVFEQTPCRTVVSWNVMIAGYAEN 117
D M E + V++ ++ L ++G L+ R + E+ +VV ++++I ++
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAG 149
G+ D+A +LF++ME + +V+T++S+I G C G
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 20/148 (13%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYA 53
LF M R ++VT +L G +G L++A FE M + + + ++ G
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQ------TPCRT 103
+A +V+DA +F + +K +VV++N M+GGL + G L A M+F + TP
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP--D 559
Query: 104 VVSWNVMIAGYAENGAMDEARALFDQME 131
++N++I + + + L ++M+
Sbjct: 560 DFTYNILIRAHLGGSGLISSVELIEEMK 587
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 76.6 bits (187), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 87/158 (55%), Gaps = 16/158 (10%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDVM 68
T +++G ++ +D+A F M + +V S+ ++ G++ G ++ A +FD M
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 69 PEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAM 120
E+ NV+ +N ++GG R+G +E A+ + ++ + V++ +I GY ++G +
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 121 DEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAA 154
EA LFD+M+ + ++ +T+++ G CR +VE A
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 76.6 bits (187), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 94/171 (54%), Gaps = 22/171 (12%)
Query: 5 VMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRVED 60
V+P N V C +++ Y + G + EA + SM ++ ++ ++T ++ G +V+D
Sbjct: 553 VLP--NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 61 ARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQ------TPCRTVVSWNVM 110
A +F M K +V S+ ++ G + G ++ A +F++ TP V+ +N++
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP--NVIIYNML 668
Query: 111 IAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+ G+ +G +++A+ L D+M + N +T+ ++I GYC++G++ A+ L
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Score = 59.7 bits (143), Expect = 8e-10, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 27/168 (16%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N++ N +L G+ +SG +++A+ + M + N V++ ++ GY +G + +A R+F
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 66 DVMPEKNVVS----WNAMVGGLVRNGGLEGARMVF---------EQTPCRTVVSWNVMIA 112
D M K +V + +V G R +E A +F P +++W V
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINW-VFKF 779
Query: 113 GYAE------NGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
G E N MD + FD+ N +T+ MI C+ GN+EAA
Sbjct: 780 GKTELKTEVLNRLMDGS---FDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 51/196 (26%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADA---------- 55
+I N+++ G ++ +DEAR F M E N ++ A + GY +A
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 56 -------------------------GRVEDARRVFDVMPEKNVV----SWNAMVGGLVRN 86
G+V +A + M ++ ++ ++ ++ GL +N
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 87 GGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITW 138
++ A +F + + V S+ V+I G+++ G M +A ++FD+M NVI +
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 139 TSMISGYCRAGNVEAA 154
++ G+CR+G +E A
Sbjct: 666 NMLLGGFCRSGEIEKA 681
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 19/161 (11%)
Query: 8 HRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVS----WTAMLGGYADAGRVEDARR 63
H N VT ++ GY +SG L EA F+ M + +V +T ++ G VE A
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753
Query: 64 VFDVMPE---KNVVSWNAMVGGLVRNGGLEGARMV--------FEQTPCRTVVSWNVMIA 112
+F + + +NA++ + + G E V F++ V++N+MI
Sbjct: 754 IFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 113 GYAENGAMDEARALFDQMEFRN----VITWTSMISGYCRAG 149
+ G ++ A+ LF QM+ N VIT+TS+++GY + G
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 76.6 bits (187), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM----PEK 71
+++ Y++ + R F+ M ERNVV+WT ++ GYA ++ +F M +
Sbjct: 133 SLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQP 192
Query: 72 NVVSWNAMVGGLVRNG----GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALF 127
N ++ A +G L G GL+ +V + +T+ N +I Y + G + +AR LF
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252
Query: 128 DQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
D+ E ++V+TW SMISGY G A G+
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGR 57
+FD M RN+VT ++SGY ++ M DE F M + N ++ A LG A+ G
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 58 VEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+V V+ +K + N+++ ++ G + AR++F++T ++VV+WN MI+G
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 114 YAENGAMDEARALFDQMEFRNV 135
YA NG EA +F M V
Sbjct: 270 YAANGLDLEALGMFYSMRLNYV 291
Score = 69.3 bits (168), Expect = 9e-13, Method: Composition-based stats.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 44/188 (23%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
R+ A+L Y++ G ++EA F + ++++V+W+AML GYA G E A ++F +
Sbjct: 426 RSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL 485
Query: 69 PEKNV--------------VSWNAMVGG--------------------------LVRNGG 88
+ + + NA +G + G
Sbjct: 486 TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGN 545
Query: 89 LEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISG 144
+E A VF++ + +VSWN MI+GYA++G +A +F +M+ R V +T+ + +
Sbjct: 546 IESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 605
Query: 145 YCRAGNVE 152
AG VE
Sbjct: 606 CTHAGLVE 613
Score = 63.2 bits (152), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQ-SGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
LFD +NI T A++ Y + + MLD R F E NVVSWTAM+ G+ E+
Sbjct: 327 LFD----QNIRT--ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEE 380
Query: 61 ARRVFDVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAE 116
A +F M K V +++ ++ L E V + R+ ++ Y +
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 117 NGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
G ++EA +F ++ ++++ W++M++GY + G EAA
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 75/220 (34%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP------------------------------- 38
N+V+ AM+SG+LQ+ +EA F M
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 420
Query: 39 ----ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARM 94
ER+ TA+L Y G+VE+A +VF + +K++V+W+AM+ G + G E A
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 95 VFEQTP-----------------C-----------------------RTVVSWNVMIAGY 114
+F + C ++ + ++ Y
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 115 AENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
A+ G ++ A +F + +++++W SMISGY + G A
Sbjct: 541 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 82/202 (40%), Gaps = 49/202 (24%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE-------------RNVVSWT-- 46
+F + ++IV +AML+GY Q+G + A F + + NV + T
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 47 -------------------------AMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
A+L YA G +E A VF EK++VSWN+M+
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 82 GLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQMEFRNVIT 137
G ++G A VF++ R V V++ + A G ++E FD M I
Sbjct: 570 GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 629
Query: 138 WTS-----MISGYCRAGNVEAA 154
T M+ Y RAG +E A
Sbjct: 630 PTKEHNSCMVDLYSRAGQLEKA 651
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 76.6 bits (187), Expect = 6e-15, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM- 68
+IV N +L+ Y + G L+EAR FE MP+R+ V+WT ++ GY+ R DA F+ M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 69 -----PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC---RTVVSWNVMIAGYAENGAM 120
P + +S + + G G ++ C V + ++ Y G M
Sbjct: 154 RFGYSPNEFTLS-SVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM 212
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
D+A+ +FD +E RN ++W ++I+G+ R E A L
Sbjct: 213 DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALEL 249
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 8/148 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ +A+L Y + G++D+A+ F+++ RN VSW A++ G+A E A +F M
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 70 EKNV----VSWNAMVGGLVRNGGLEGARMV----FEQTPCRTVVSWNVMIAGYAENGAMD 121
S+ ++ G G LE + V + + N ++ YA++G++
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAG 149
+AR +FD++ R+V++W S+++ Y + G
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHG 342
Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAG 56
++FD + RN V+ NA+++G+ + ++A F+ M S+ ++ G + G
Sbjct: 217 LVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTG 276
Query: 57 RVEDARRVFDVM---PEKNVV-SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
+E + V M EK V + N ++ ++G + AR +F++ R VVSWN ++
Sbjct: 277 FLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLT 336
Query: 113 GYAENGAMDEARALFDQME---FR-NVITWTSMISGYCRAGNVEAAY 155
YA++G EA F++M R N I++ S+++ +G ++ +
Sbjct: 337 AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGR 57
+FD + R++V+ N++L+ Y Q G EA W+FE M N +S+ ++L + +G
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 58 VEDARRVFDVMPEKNVV--SWN--AMVGGLVRNGGLEGARMVFEQTPCR-TVVSWNVMI 111
+++ +++M + +V +W+ +V L R G L A E+ P T W ++
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 76.3 bits (186), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 87/162 (53%), Gaps = 17/162 (10%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRVEDARRVFDVM 68
TC +L+ ++G+++ A W+F M + N++++T+++ G G ++ A + + M
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
Query: 69 P----EKNVVSWNAMVGGLVRNGGLEGA-----RMVFEQTPCRTVVSWNVMIAGYAENGA 119
+ NV + A++ GL + G E A ++V T V ++ MI GY +
Sbjct: 314 VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK 373
Query: 120 MDEARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
++ A LF +M+ F NV T+T++I+G+C+AG+ AY L
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 76.3 bits (186), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 86/164 (52%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++V N ++ G+ + ++E F M +R N V++T ++ G+ A ++A+ VF
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMIAGYAEN 117
M +++++N ++ GL NG +E A +VFE R +V++ MI +
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G +++ LF + + NV+T+T+M+SG+CR G E A L
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N VT ++ G+ Q+ D A+ F+ M +++++ +L G + G VE A VF
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 66 DVMPEKN----VVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
+ M +++ +V++ M+ L + G +E +F + VV++ M++G+
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 509
Query: 118 GAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAA 154
G +EA ALF +M+ N T+ ++I R G+ EAA
Sbjct: 510 GLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD-EAA 549
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT N++L+G+ + EA + M E + V++T ++ G + +A +
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPC----RTVVSWNVMIAGYAEN 117
+ M K ++V++ A++ GL + G + A + + VV +N +I G +
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAG 149
MD+A LF++ME + +V T+ +IS C G
Sbjct: 264 KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 76.3 bits (186), Expect = 8e-15, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGR 57
LFD MP R++ + NA+++G + EA ++ M R+ V+ A LG + G
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGD 225
Query: 58 VEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ-TPCRTVVSWNVMIAGYAE 116
V++ +F NV+ NA + + G ++ A VFEQ T ++VV+WN MI G+A
Sbjct: 226 VKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 117 NGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
+G A +FD++E + +++ + ++ AG VE YGL
Sbjct: 286 HGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVE--YGL 328
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 14 CNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV 73
C +L Y ++G L A F+ MP R+V SW A++ G R +A ++ M + +
Sbjct: 147 CTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGI 206
Query: 74 ----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
V+ A +G G ++ +F V+ N I Y++ G +D+A +F+Q
Sbjct: 207 RRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQ 266
Query: 130 ME-FRNVITWTSMISGYCRAGNVEAA 154
++V+TW +MI+G+ G A
Sbjct: 267 FTGKKSVVTWNTMITGFAVHGEAHRA 292
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 43/180 (23%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF------DVMP 69
+++ Y++ +LD AR FE+ +RNVV WT ++ G+A R +A +F ++P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 70 ---------------------------------EKNVVSWNAMVGGLVRNGGLEGARMVF 96
E + V++ + + R G ++ AR VF
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 97 EQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
+ P R V+SW+ MI + NG +EA F +M+ +NV +T+ S++S +GNV+
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
+V+C+++ G L+ G + + E + V++T+ + YA G ++ AR VFD+MPE
Sbjct: 319 LVSCSSL--GSLRHGKSVHG-YMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPE 375
Query: 71 KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV----MIAGYAENGAMDEARAL 126
+NV+SW++M+ NG E A F + + VV +V +++ + +G + E
Sbjct: 376 RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQ 435
Query: 127 FDQM 130
F+ M
Sbjct: 436 FESM 439
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVS 75
+++ Y Q G ++ A+ F+ +P RN V W ++ GY + + R+F +M + +
Sbjct: 149 SLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLAL 208
Query: 76 WNAMVGGLVRNGGLEGA----RMVFEQTPCRTVVSWN-----VMIAGYAENGAMDEARAL 126
+ LV+ G A + V + R+ + + +I Y + +D AR L
Sbjct: 209 DALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKL 268
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
F+ RNV+ WT++ISG+ + A+ L
Sbjct: 269 FETSVDRNVVMWTTLISGFAKCERAVEAFDL 299
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMP--ERNVVSWTAMLGGYADAGRV---------E 59
+V +++ + Y+QS LD A F +P +RN SW +L GY+ +
Sbjct: 39 VVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYN 98
Query: 60 DARRVFDVMPEKNVV-SWNAMVG-GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAEN 117
RR D + N+V + A VG GL+ NG L + V+ + ++ YA+
Sbjct: 99 RMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPS-LVEMYAQL 157
Query: 118 GAMDEARALFDQMEFRNVITWTSMISGYCR 147
G M+ A+ +FD++ RN + W ++ GY +
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 76.3 bits (186), Expect = 9e-15, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGR 57
+FD MP RN+VT A+++GY+QS D+ FE M + +V + +++L A G
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 58 VEDARRVFDVM----PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+ RRV M E N + ++ V+ G LE A +VFE+ + V +W MI G
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 114 YAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
+A +G +A LF M +V +T+ +++S G VE
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVE 424
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N+++SGY SG+ D A F+ +++VV+WTAM+ G+ G +A F M + V
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 75 SWNAMVGGLVRNGG----------LEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEAR 124
+ V +++ G + G + + C + + ++ Y + D+A+
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG-SSLVDMYGKCSCYDDAQ 260
Query: 125 ALFDQMEFRNVITWTSMISGYCRA 148
+FD+M RNV+TWT++I+GY ++
Sbjct: 261 KVFDEMPSRNVVTWTALIAGYVQS 284
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 79/235 (33%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP-------ERNVVS---------- 44
LFD +++VT AM+ G++++G EA +F M E VVS
Sbjct: 160 LFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVED 219
Query: 45 ---WTAMLGGYADAGRV--------------------EDARRVFDVMPEKNVVSWNAMVG 81
++ G Y + GRV +DA++VFD MP +NVV+W A++
Sbjct: 220 VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIA 279
Query: 82 GLVRNGGLEGARMVFEQ-----------------TPCRTV-------------------- 104
G V++ + +VFE+ + C V
Sbjct: 280 GYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 105 --VSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ +I Y + G ++EA +F+++ +NV TWT+MI+G+ G A+ L
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDL 394
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N ++ Y++ G L+EA FE + E+NV +WTAM+ G+A G DA +F M
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 70 EKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS-----WNVMIAGYAENGAM 120
+V V++ A++ G +E R +F R + + M+ + G +
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLL 459
Query: 121 DEARALFDQ--MEFRNVITWTSMISGYC 146
+EA+AL ++ ME NV+ W ++ G C
Sbjct: 460 EEAKALIERMPMEPTNVV-WGALF-GSC 485
Score = 49.7 bits (117), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 108 NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
N +I+GY+ +G D A LFD E ++V+TWT+MI G+ R G+ A
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEA 188
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 9/153 (5%)
Query: 14 CNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV 73
CNA++ Y++ D A F+ M + VV+W +++ GY + G V+ A F+ MPEKN+
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 74 VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWN-----VMIAGYAENGAMDEARALFD 128
VSWN ++ GLV+ E A VF + V+ + + + GA+D A+ ++
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 129 QMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+E +V T+++ + R G+ E+A +
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSI 527
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM------PE--------------RN 41
LFD N+ CNAM S Y++ G+ EA F M P+ RN
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 42 VV---------------SW----TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
++ SW A++ Y R + A R+FD M K VV+WN++V G
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME 131
V NG ++ A FE P + +VSWN +I+G + +EA +F M+
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA-----RR 63
+++ N+++ Y + G LD AR F+ M ERNVVSWT+M+ GYA +DA R
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 64 VFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG----YAENGA 119
V D N V+ ++ + LE V+ + ++M++ Y + A
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+D A+ LFD+ N+ +M S Y R G A G+
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 9/165 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD M ++ +VT N++++GY+++G +D A FE+MPE+N+VSW ++ G E+A
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 62 RRVFDVMPEKNVVSWN-----AMVGGLVRNGGLEGARMVF---EQTPCRTVVSW-NVMIA 112
VF M + V+ + ++ G L+ A+ ++ E+ + V ++
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
++ G + A ++F+ + R+V WT+ I AGN E A L
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 45 WTAMLGGYADAGRVEDARRVF------DVMPEKNVVSW--NAMVGGLVRNGGLEGARMVF 96
+ +++ GYA +G +A +F + P+K + +A + G++ ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 97 EQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCR 147
+ + + N ++ YAE G +D AR +FD+M RNV++WTSMI GY R
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 76.3 bits (186), Expect = 9e-15, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 41/183 (22%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N+++ Y G LD A+ F +P+R++VSW +++ G G V A ++FD MP+KN++
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 75 SWNAMVGG----------------LVRNGGLEG--ARMVFEQTPC--------------- 101
SWN M+ +VR G +G + +V C
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVR-AGFQGNESTLVLLLNACGRSARLKEGRSVHAS 275
Query: 102 --RTVVSWNV-----MIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
RT ++ +V +I Y + + AR +FD + RN +TW MI +C G E
Sbjct: 276 LIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGG 335
Query: 155 YGL 157
L
Sbjct: 336 LEL 338
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 47/195 (24%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADA------ 55
LF +P R+IV+ N++++G +++G + A F+ MP++N++SW M+ Y A
Sbjct: 175 LFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVS 234
Query: 56 -----------------------------GRVEDARRV----FDVMPEKNVVSWNAMVG- 81
R+++ R V +VV A++
Sbjct: 235 ISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDM 294
Query: 82 -GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM---EFR-NVI 136
G + GL AR +F+ R V+WNVMI + +G + LF+ M R + +
Sbjct: 295 YGKCKEVGL--ARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEV 352
Query: 137 TWTSMISGYCRAGNV 151
T+ ++ G RAG V
Sbjct: 353 TFVGVLCGCARAGLV 367
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 9/153 (5%)
Query: 14 CNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV 73
CNA++ Y++ D A F+ M + VV+W +++ GY + G V+ A F+ MPEKN+
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI 434
Query: 74 VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWN-----VMIAGYAENGAMDEARALFD 128
VSWN ++ GLV+ E A VF + V+ + + + GA+D A+ ++
Sbjct: 435 VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY 494
Query: 129 QMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+E +V T+++ + R G+ E+A +
Sbjct: 495 YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSI 527
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM------PE--------------RN 41
LFD N+ CNAM S Y++ G+ EA F M P+ RN
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 42 VV---------------SW----TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
++ SW A++ Y R + A R+FD M K VV+WN++V G
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME 131
V NG ++ A FE P + +VSWN +I+G + +EA +F M+
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA-----RR 63
+++ N+++ Y + G LD AR F+ M ERNVVSWT+M+ GYA +DA R
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 64 VFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG----YAENGA 119
V D N V+ ++ + LE V+ + ++M++ Y + A
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+D A+ LFD+ N+ +M S Y R G A G+
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 9/165 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD M ++ +VT N++++GY+++G +D A FE+MPE+N+VSW ++ G E+A
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 62 RRVFDVMPEKNVVSWN-----AMVGGLVRNGGLEGARMVF---EQTPCRTVVSW-NVMIA 112
VF M + V+ + ++ G L+ A+ ++ E+ + V ++
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
++ G + A ++F+ + R+V WT+ I AGN E A L
Sbjct: 514 MFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 45 WTAMLGGYADAGRVEDARRVF------DVMPEKNVVSW--NAMVGGLVRNGGLEGARMVF 96
+ +++ GYA +G +A +F + P+K + +A + G++ ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 97 EQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCR 147
+ + + N ++ YAE G +D AR +FD+M RNV++WTSMI GY R
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 86/164 (52%), Gaps = 16/164 (9%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGY----ADAGRV 58
F V P+ + N ++ GY + G+ D+A + M + T+ Y D GR+
Sbjct: 304 FAVTPY----SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 59 EDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC----RTVVSWNVMIAGY 114
+DAR + M +VVS+N ++ G ++ G A ++F+ ++V++N +I G
Sbjct: 360 DDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 115 AENGAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAA 154
E+G ++ A+ L ++M F +VIT+T+++ G+ + GN+ A
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP--- 69
T N + G +D+AR SM +VVS+ ++ GY G+ +A +FD +
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD 404
Query: 70 -EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAMDEAR 124
++V++N ++ GL +G LEGA+ + E+ + V+++ ++ G+ +NG + A
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMAT 464
Query: 125 ALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
++D+M + + +T+ G R G+ + A+ L
Sbjct: 465 EVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 56/211 (26%)
Query: 1 MLFDVMP----HRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGY 52
+LFD + H +IVT N ++ G +SG L+ A+ E M + +V+++T ++ G+
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 53 ADAGRVEDARRVFDVMPEKNV--------------------------------------- 73
G + A V+D M K +
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 74 -VSWNAMVGGLVRNGGL----EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFD 128
+N + GL + G L E R +F V++ +I GY ENG AR L+D
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 129 QM----EFRNVITWTSMISGYCRAGNVEAAY 155
+M + +VIT+ +I G+ +AG +E A+
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 605
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++ CN +L S M+++A +E+M E V+++ ML AG +E +++
Sbjct: 202 SVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIW 261
Query: 66 DVMPEKNV----VSWNAMVGGLVRNGGLEGARMV--------FEQTPCRTVVSWNVMIAG 113
M +N+ V++N ++ G +NG +E AR F TP S+N +I G
Sbjct: 262 LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP----YSFNPLIEG 317
Query: 114 YAENGAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
Y + G D+A + D+M + T+ I C G ++ A L
Sbjct: 318 YCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAREL 365
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 58 VEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAG 113
+E R++F V + V++ ++ G + NG + AR ++++ + +V+++ V+I G
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 594
Query: 114 YAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAY 155
+A+ G +++A +M+ R NV+T +++ G C+AGN++ AY
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 75.5 bits (184), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 20/177 (11%)
Query: 1 MLFDVMPHR----NIVTCNAMLSGYLQSGMLDEAR-WFFESMP---ERNVVSWTAMLGGY 52
M++DVM + ++ TCN + S + + DEA+ W F M + + VS+T ++ Y
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 53 ADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV---- 104
G VE+A+R+F M K N +++N M+ + G ++ AR + +
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDS 539
Query: 105 VSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++ +I G +DEA LF +M + N +T+T MISG +AG + A+GL
Sbjct: 540 YTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGL 596
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDV 67
V N ++ GY + GM+DEA ++ M ++ +V + + + R ++A++
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 68 MPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGA 119
M E V VS+ ++ + G +E A+ +F + + V +++NVMI Y + G
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 120 MDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
+ EAR L ME + T+TS+I G C A NV+ A L
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRL 561
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 51/196 (26%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVS----WTAMLGGYADAGRVEDARRVF 65
N VT ++ +++G + +A F+ M ER + S +T+++ G ++ A +F
Sbjct: 293 NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLF 352
Query: 66 DVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
D + EK + ++ A++ G+ + G + A ++ + + T V +N +I GY
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 118 GAMDEARALFDQME-------------------------------FR--------NVITW 138
G +DEA ++D ME FR + +++
Sbjct: 413 GMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSY 472
Query: 139 TSMISGYCRAGNVEAA 154
T++I YC+ GNVE A
Sbjct: 473 TNLIDVYCKEGNVEEA 488
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 31 RWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV----VSWNAMVGGLVRN 86
R +S + V S T ++ G G VE ++++ K + ++N ++ V+
Sbjct: 213 RRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ 272
Query: 87 ---GGLEGARMVFEQTPC-RTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITW 138
G+EG V ++ V++ +++ +NG M +A LFD+M R +V +
Sbjct: 273 RDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVY 332
Query: 139 TSMISGYCRAGNVEAAYGL 157
TS+IS CR GN++ A+ L
Sbjct: 333 TSLISWNCRKGNMKRAFLL 351
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 93/234 (39%), Gaps = 78/234 (33%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER--------------------- 40
+FD MP +N VT AM+ GYL+ G+ DEA FE +
Sbjct: 139 VFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRA 198
Query: 41 ------------------NVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
N++ ++++ YA G + A R FD+M EK+V+SW A++
Sbjct: 199 EFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISA 258
Query: 83 LVRNG-GLEGARMVF----------EQTPC-----------------------RTVVSWN 108
R G G++ M E T C + ++ +
Sbjct: 259 CSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTD 318
Query: 109 VMIAG-----YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
V + YA+ G + + R +FD M RN +TWTS+I+ + R G E A L
Sbjct: 319 VFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISL 372
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 6 MPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF 65
M ++ +++ Y + G + + R F+ M RN V+WT+++ +A G E+A +F
Sbjct: 314 MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLF 373
Query: 66 DVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV---VSWNVMIAG-----YAEN 117
+M +++++ N V ++R G GA ++ ++ + + + NV I Y +
Sbjct: 374 RIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKC 433
Query: 118 GAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
G +A + Q+ R+V++WT+MISG G+ A
Sbjct: 434 GESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEA 470
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N ++S ++ G L AR F+SMPE+N V+WTAM+ GY G ++A +F+ + +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 75 SWN-----AMVGGLVRNGGLEGARMV---FEQTPCRTVVSWNVMIAGYAENGAMDEARAL 126
N ++ R E R V + ++ + ++ YA+ G + A
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
FD ME ++VI+WT++IS R G+ A G+
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGM 271
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
+N+ + ++ Y + G +A + +P R+VVSWTAM+ G + G +A M
Sbjct: 418 KNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEM 477
Query: 69 ----PEKNVVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAENGAM 120
E N ++++ + + L R + + V + +I YA+ G +
Sbjct: 478 IQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFV 537
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
EA +FD M +N+++W +MI GY R G A L
Sbjct: 538 SEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKL 574
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 6 MPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRVEDA 61
+P R++V+ AM+SG G EA F + M E N ++++ L A++ +
Sbjct: 446 LPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIG 505
Query: 62 RRVFDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAEN 117
R + + + NV +A++ + G + A VF+ P + +VSW MI GYA N
Sbjct: 506 RSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARN 565
Query: 118 GAMDEARALFDQME 131
G EA L +ME
Sbjct: 566 GFCREALKLMYRME 579
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
+ ++ Y ++G + AR F+ PER + SW A++GG AGR +A +F M +
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 75 SWN-AMVGGLVRNGGLEGARMVFEQTPC---------RTVVSWNVMIAGYAENGAMDEAR 124
+ MV GGL + F+ C ++ N +I Y + G MD A
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLAS 275
Query: 125 ALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+F++M RNV++W+SMI GY GN A
Sbjct: 276 HIFEEMRQRNVVSWSSMIVGYAANGNTLEA 305
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 14/157 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+I+ N+++ Y + G +D A FE M +RNVVSW++M+ GYA G +A F M
Sbjct: 254 DIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR 313
Query: 70 E----KNVVSWNAMV-----GGLVRNGGLEGARMV--FEQTPCRTVVSWNVMIAGYAENG 118
E N +++ ++ GGLV G A M FE P + + ++ + +G
Sbjct: 314 EFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEP--GLSHYGCIVDLLSRDG 371
Query: 119 AMDEARALFDQMEFR-NVITWTSMISGYCRAGNVEAA 154
+ EA+ + ++M + NV+ W ++ G + G+VE A
Sbjct: 372 QLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGR----VEDARRVFDVMPE 70
N++L Y ++ ++ A F MPE NVVSW M+ G+ R VE R+ D +
Sbjct: 288 NSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ 347
Query: 71 KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
N V+ +++G R+G +E R +F P +V +WN M++GY+ +EA + F QM
Sbjct: 348 PNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 131 EFRNV 135
+F+N+
Sbjct: 408 QFQNL 412
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%)
Query: 14 CNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV 73
CN +L Y++ G D AR F+ M R+V SW A L G + +A VFD MPE++V
Sbjct: 44 CNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDV 103
Query: 74 VSWNAMVGGLVRNGGLEGARMVFEQTPC 101
VSWN M+ LVR G E A +V+++ C
Sbjct: 104 VSWNNMISVLVRKGFEEKALVVYKRMVC 131
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N VTC ++L +SG ++ R F S+P+ +V +W AML GY++ E+A F M
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 70 EKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV-----MIAGYAENGAM 120
+N+ + + ++ R LEG + + RT +S N +IA Y+E M
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQI-HGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 121 DEARALFDQ-MEFRNVITWTSMISGY 145
+ + +FD + ++ W SMISG+
Sbjct: 468 EISECIFDDCINELDIACWNSMISGF 493
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 48 MLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW 107
+L Y + G + AR+VFD M ++V SWNA + + G L A VF+ P R VVSW
Sbjct: 47 LLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSW 106
Query: 108 NVMIAGYAENGAMDEARALFDQM 130
N MI+ G ++A ++ +M
Sbjct: 107 NNMISVLVRKGFEEKALVVYKRM 129
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLG-----GYADAG 56
+FD M R++ + NA L+ + G L EA F+ MPER+VVSW M+ G+ +
Sbjct: 63 VFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKA 122
Query: 57 RVEDARRVFD-VMPEKNVVSWNAMVGGLVRNG--GLEGARMVFEQTPCRTVVSWNVMIAG 113
V R V D +P + ++ V +G G+ + + + + N +++
Sbjct: 123 LVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSM 182
Query: 114 YAENG-AMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
YA+ G +D +F+ + N +++T++I G R V A
Sbjct: 183 YAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER-----NVVSWTAMLGGYADAGRV 58
D + +I N+M+SG+ + + +A F M + N S+ +L + +
Sbjct: 476 DCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSL 535
Query: 59 EDARRVFDVMPEKNVVS----WNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGY 114
R+ ++ + VS A+ + G ++ AR F+ + V WN MI GY
Sbjct: 536 LHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGY 595
Query: 115 AENGAMDEARALFDQM----EFRNVITWTSMISGYCRAGNVEA 153
NG DEA L+ +M E + IT+ S+++ +G VE
Sbjct: 596 GHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVET 638
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 77 NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVI 136
N ++ + G + AR VF++ R V SWN + + G + EA +FD M R+V+
Sbjct: 45 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 104
Query: 137 TWTSMISGYCRAGNVEAA 154
+W +MIS R G E A
Sbjct: 105 SWNNMISVLVRKGFEEKA 122
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+ T N ++ G+ +G +D A F+ M + NVV++ ++ GY +++D ++
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
M E N++S+N ++ GL R G ++ V + R V++N +I GY +
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
G +A + +M +VIT+TS+I C+AGN+ A
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 84/164 (51%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+++T +++ ++G ++ A F + M R N ++T ++ G++ G + +A RV
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
M + +VV++NA++ G G +E A V E + VVS++ +++G+ +
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 118 GAMDEA----RALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+DEA R + ++ + IT++S+I G+C + A L
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDV 67
VT N ++ GY + G +A M +V+++T+++ AG + A D
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 68 MPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQ------TPCRTVVSWNVMIAGYAEN 117
M + N ++ +V G + G + A V + +P +VV++N +I G+
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP--SVVTYNALINGHCVT 428
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
G M++A A+ + M+ + +V+++++++SG+CR+ +V+ A
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 59/210 (28%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYA 53
LFD M + N+VT N ++ GY + +D+ SM E N++S+ ++ G
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQ------TPCRT 103
GR+++ V M + + V++N ++ G + G A ++ + TP +
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP--S 344
Query: 104 VVSWNVMIAGYAENGAMDEARALFDQMEFR------------------------------ 133
V+++ +I + G M+ A DQM R
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 134 ---------NVITWTSMISGYCRAGNVEAA 154
+V+T+ ++I+G+C G +E A
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 43/160 (26%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++VT NA+++G+ +G +++A E M E+ +VVS++ +L G+ + V++A RV
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 66 DVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARA 125
M EK + ++++ +I G+ E EA
Sbjct: 474 REMVEKGIKP---------------------------DTITYSSLIQGFCEQRRTKEACD 506
Query: 126 LFDQM--------EFRNVITWTSMISGYCRAGNVEAAYGL 157
L+++M EF T+T++I+ YC G++E A L
Sbjct: 507 LYEEMLRVGLPPDEF----TYTALINAYCMEGDLEKALQL 542
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 41/184 (22%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM------PERNVVSWTAMLGGYADAGRVEDARR 63
+ +T ++++ G+ + EA +E M P+ ++TA++ Y G +E A +
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE--FTYTALINAYCMEGDLEKALQ 541
Query: 64 VFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVF------EQTPC------------ 101
+ + M EK +VV+++ ++ GL + A+ + E P
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 102 ----RTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEA 153
++VVS +I G+ G M EA +F+ M +N + MI G+CRAG++
Sbjct: 602 NIEFKSVVS---LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 154 AYGL 157
AY L
Sbjct: 659 AYTL 662
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 11/99 (11%)
Query: 68 MPEKNVVSWNAMVGGLVRNG-GLEGARMVF----EQTPCRTVVSWNVMIAGYAENGAMDE 122
MP V+S+NA++ +R+ + A VF E V ++N++I G+ G +D
Sbjct: 166 MP--GVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 123 ARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
A LFD+ME + NV+T+ ++I GYC+ ++ + L
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 10/162 (6%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARR 63
+ + H ++ T A+ + Y + ++ AR F+ PE+++ SW AM+ GY G EDA
Sbjct: 349 NFLSHASVST--ALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 64 VFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPC----RTVVSWNVMIAGYA 115
+F M + N V+ ++ + G L + V + ++ +I YA
Sbjct: 407 LFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYA 466
Query: 116 ENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ G++ EAR LFD M +N +TW +MISGY G + A +
Sbjct: 467 KCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNI 508
Score = 71.2 bits (173), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 52/203 (25%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----------------------- 38
LFD P +++ + NAM+SGY Q+G+ ++A F M
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGA 435
Query: 39 ----------------ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
E ++ TA++G YA G + +ARR+FD+M +KN V+WN M+ G
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISG 495
Query: 83 LVRNG-GLEGARMVFEQ-----TPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR--- 133
+G G E + +E TP T V++ ++ + G + E +F+ M R
Sbjct: 496 YGLHGQGQEALNIFYEMLNSGITP--TPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGF 553
Query: 134 --NVITWTSMISGYCRAGNVEAA 154
+V + M+ RAG+++ A
Sbjct: 554 EPSVKHYACMVDILGRAGHLQRA 576
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 87/164 (53%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+++T + M+ + +SG +A M ER +VV+++A++ G+V +A ++
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY 169
Query: 66 DVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMIAGYAEN 117
M + + +++N+M+ G + L A+ + + ++ VV+++ +I GY +
Sbjct: 170 GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+D +F +M R N +T+T++I G+C+ G+++AA L
Sbjct: 230 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 273
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 41 NVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVF---E 97
+VV++T ++ G GRV A + D M E+ + ++ GL + G E A + E
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKME 68
Query: 98 QTPCRT-VVSWNVMIAGYAENGAMDEARALFDQME----FRNVITWTSMISGYCRAG 149
+T + VV +N +I ++G A+ LF +M F +VIT++ MI +CR+G
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSG 125
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 40/172 (23%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMV 80
Y G + +A+ F+ M ERNVV W M+ G+ D+G VE +F M E+++VSWN+M+
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMI 206
Query: 81 GGLVRNGGLEGARMVF----------EQTPCRTVV------------SW----------- 107
L + G A +F ++ TV+ W
Sbjct: 207 SSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLF 266
Query: 108 -------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVE 152
N ++ Y ++G ++ A A+F +M+ RNV++W ++ISG G E
Sbjct: 267 KDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGE 318
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 40/169 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD M RN+V N M+ G+ SG ++ F+ M ER++VSW +M+ + GR +A
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 62 RRVFDVM------PEKNVV----------------SW------------------NAMVG 81
+F M P++ V W NA+V
Sbjct: 219 LELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 82 GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
++G LE A +F + R VVSWN +I+G A NG + LFD M
Sbjct: 279 FYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAM 327
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
+F + + N++ NAM+ Y G E+ FF SM R + ++ +L +
Sbjct: 58 VFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSD 117
Query: 58 VEDARRVFDVMPEKNVVSWNAMVGGLVR---NGGLEG-ARMVFEQTPCRTVVSWNVMIAG 113
+ + V + + G+V +GG G A+ VF++ R VV WN+MI G
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRG 177
Query: 114 YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ ++G ++ LF QM R++++W SMIS + G A L
Sbjct: 178 FCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALEL 221
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
I NA++ Y +SG L+ A F M RNVVSW ++ G A G+ E +FD M E
Sbjct: 270 ITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIE 329
Query: 71 KNVVSWN-----------AMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA 119
+ V+ N + G + R L G M + RT + M+ + +G
Sbjct: 330 EGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEART-EHYGAMVDLMSRSGR 388
Query: 120 MDEARALFDQMEFR-NVITWTSMISGYCRAGNVEAA 154
+ EA M N W S++S G+V+ A
Sbjct: 389 ITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLA 424
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 92/173 (53%), Gaps = 19/173 (10%)
Query: 1 MLFDVMPHR---NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYA 53
ML D+M ++VT A++ +++ G LDEA+ ++ M + +V V++ +++ G
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVV 105
GR+ DA++ FD+M K NVV++N ++ G + ++ +F++ C +
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
++N +I GY + G + A +F M R ++IT ++ G C G +E+A
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Score = 73.6 bits (179), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 87/161 (54%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++VT N +L+G SG +A M +R +VV++TA++ + G +++A+ ++
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 66 DVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
M + +V V++N+++ GL +G L A+ F+ + VV++N +I+G+ +
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+DE LF +M ++ T+ ++I GYC+ G + A
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARM 94
E ++V++ ++L G+ R+ DA + +M E NVV +N ++ GL +NG L A
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 95 VFEQTPCR----TVVSWNVMIAGYAENGAM-DEARALFDQMEFR---NVITWTSMISGYC 146
+ + + VV++N ++ G +G D AR L D M+ +V+T+T++I +
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 147 RAGNVEAAYGL 157
+ GN++ A L
Sbjct: 258 KQGNLDEAQEL 268
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+I T N ++ GY Q G L A F M R ++++ +L G G +E A F
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 66 DVMPEKN----VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMIAGYAEN 117
D M E +V++N M+ GL + +E A +F + P V ++ +MI G +N
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 118 GAMDEARALFDQMEFRNVI 136
G EA L +M+ +I
Sbjct: 470 GPRREADELIRRMKEEGII 488
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N N+++S +++S +++A+ FES+ E+N+VS+ L G E A ++ +
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 70 EKNV----VSWNAMVGGLVRNGGLEGARMVFEQT-----PCRTVVSWNVMIAGYAENGAM 120
E+ + ++ +++ G+ G + + Q C V N +I+ Y++ G++
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC-NALISMYSKCGSI 525
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAG 149
D A +F+ ME RNVI+WTSMI+G+ + G
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHG 554
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 21/157 (13%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP---ERNVVSWTAMLGGYADAGRVE 59
FD+ P + V N+++S Y +SG +A FE+M +R+VVSW+AM+ Y + GR
Sbjct: 91 FDIEP--DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGREL 148
Query: 60 DARRVFDVMPEKNVVSWNAMVGGLVR---NGGLEGARMV----------FEQTPCRTVVS 106
DA +VF E +V + ++R N G V FE C
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 107 WNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMIS 143
++ + G EN + + A +FD+M NV+TWT MI+
Sbjct: 209 IDMFVKG--EN-SFENAYKVFDKMSELNVVTWTLMIT 242
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N CNA++S Y + G +D A F M RNV+SWT+M+ G+A G F+ M
Sbjct: 508 NQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Query: 70 EK----NVVSWNAMVG-----GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
E+ N V++ A++ GLV G M + + + M+ G +
Sbjct: 568 EEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLL 627
Query: 121 DEARALFDQMEFR-NVITWTSMISGYCR 147
+A + M F+ +V+ W + + G CR
Sbjct: 628 TDAFEFINTMPFQADVLVWRTFL-GACR 654
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 40/133 (30%)
Query: 59 EDARRVFDVMPEKNVVSWNAMVGGLVRNG---------------GLEGARMVFEQ--TPC 101
E+A +VFD M E NVV+W M+ ++ G G E + + C
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 102 ---------RTVVSWNV--------------MIAGYAENGAMDEARALFDQMEFRNVITW 138
+ + SW + M A + +G++D+ R +FD+ME +V++W
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 139 TSMISGYCRAGNV 151
T++I+GY + N+
Sbjct: 340 TALITGYMKNCNL 352
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 47/200 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN-------VVS---------- 44
+FD MP R++V+ N +++GY Q+GM A +SM E N +VS
Sbjct: 192 VFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 45 ----------------------WTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
TA++ YA G +E AR++FD M E+NVVSWN+M+
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGY----AENGAMDEARALFD-QMEF---RN 134
V+N + A ++F++ V +V + G A+ G ++ R + +E RN
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 135 VITWTSMISGYCRAGNVEAA 154
V S+IS YC+ V+ A
Sbjct: 372 VSVVNSLISMYCKCKEVDTA 391
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
LFD M RN+V+ N+M+ Y+Q+ EA F+ M + V VS L AD G
Sbjct: 293 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352
Query: 58 VEDARRVFDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+E R + + E +NV N+++ + ++ A +F + RT+VSWN MI G
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 114 YAENGAMDEARALFDQMEFRNV----ITWTSMISG 144
+A+NG +A F QM R V T+ S+I+
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 79/188 (42%), Gaps = 43/188 (22%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
RN+ N+++S Y + +D A F + R +VSW AM+ G+A GR DA F M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 69 P---------------------------------------EKNVVSWNAMVGGLVRNGGL 89
+KNV A+V + G +
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGY 145
AR++F+ R V +WN MI GY +G A LF++M+ + +T+ S+IS
Sbjct: 490 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549
Query: 146 CRAGNVEA 153
+G VEA
Sbjct: 550 SHSGLVEA 557
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
NI T A++ Y + G L+ AR F+ M ERNVVSW +M+ Y ++A +F M
Sbjct: 272 NIST--ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 70 EKNVVSWNAMVGGLVRN----GGLEGARMVFEQTP----CRTVVSWNVMIAGYAENGAMD 121
++ V + V G + G LE R + + + R V N +I+ Y + +D
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAG 149
A ++F +++ R +++W +MI G+ + G
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNG 417
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 45/156 (28%)
Query: 41 NVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFE--Q 98
++ + T + YA +V +AR+VFD MPE+++VSWN +V G +NG ARM E +
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG---MARMALEMVK 225
Query: 99 TPCR--------TVVS--------------------------------WNVMIAGYAENG 118
+ C T+VS ++ YA+ G
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 119 AMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+++ AR LFD M RNV++W SMI Y + N + A
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEA 321
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFF----ESMPERNVVSWTAMLGGYADAGRVE 59
D + +++T A LS + A+W S ++NV TA++ YA G +
Sbjct: 437 DTFTYVSVITAIAELS------ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490
Query: 60 DARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYA 115
AR +FD+M E++V +WNAM+ G +G + A +FE+ T+ V++ +I+ +
Sbjct: 491 IARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 550
Query: 116 ENGAMDEARALFDQME 131
+G ++ F M+
Sbjct: 551 HSGLVEAGLKCFYMMK 566
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 73.6 bits (179), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF----- 65
IV N M+ GY++ G AR F+ M +R+VVSW M+ GY+ G +DA VF
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 66 -DVMPEKNVVSWNAMVGGLVRNGGLEGAR---MVFEQTPCRT-VVSWNVMIAGYAENGAM 120
D+ P N V+ +++ + R G LE + E + R V + +I Y++ G +
Sbjct: 268 GDIRP--NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAG 149
++A +F+++ NVITW++MI+G+ G
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHG 354
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 23/137 (16%)
Query: 21 YLQSGMLDEAR-WFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAM 79
Y+ G + +AR F++++ E+++V T D R+ + +V WN M
Sbjct: 173 YVMCGFMKDARVLFYKNIIEKDMVVMT-------------DRRK-----RDGEIVLWNVM 214
Query: 80 VGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM---EFR-NV 135
+ G +R G + ARM+F++ R+VVSWN MI+GY+ NG +A +F +M + R N
Sbjct: 215 IDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNY 274
Query: 136 ITWTSMISGYCRAGNVE 152
+T S++ R G++E
Sbjct: 275 VTLVSVLPAISRLGSLE 291
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAG 56
MLFD M R++V+ N M+SGY +G +A F M + N V+ ++L + G
Sbjct: 229 MLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLG 288
Query: 57 RVEDARRVFDVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
+E + + + V +A++ + G +E A VFE+ P V++W+ MI
Sbjct: 289 SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMIN 348
Query: 113 GYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
G+A +G +A F +M V + + ++++ G VE
Sbjct: 349 GFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVE 392
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK 71
V +A++ Y + G++++A FE +P NV++W+AM+ G+A G+ DA F M +
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 369
Query: 72 NV----VSWNAMV-----GGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDE 122
V V++ ++ GGLV G ++MV + + M+ +G +DE
Sbjct: 370 GVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429
Query: 123 ARALFDQMEFR-NVITWTSMISGYCR-AGNVE 152
A M + + + W +++ G CR GNVE
Sbjct: 430 AEEFILNMPIKPDDVIWKALL-GACRMQGNVE 460
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 73.6 bits (179), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 90/171 (52%), Gaps = 20/171 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
+F MP + ++ T N+++SG + + A W M N V++ ++ +
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQT----PCRTVV 105
G +++AR++ + M + + +++N+++ GL R G ++ AR +FE+ + +
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
S N++I G +G ++EA +M R +++T+ S+I+G CRAG +E
Sbjct: 601 SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVF 65
N+ + ++ G+ + G +DEA M + N V + ++ + R+ +A +F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGA----RMVFEQTPCRTVVSWNVMIAGYAEN 117
MP K +V ++N+++ GL ++ A R + + V++N +I +
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G + EAR L ++M F+ + IT+ S+I G CRAG V+ A L
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Score = 66.6 bits (161), Expect = 7e-12, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 85/162 (52%), Gaps = 18/162 (11%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N V N ++S + + + EA F MP + +V ++ +++ G + ++ A +
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 66 -DVMPE---KNVVSWNAMVGGLVRNGGLEGAR-----MVFEQTPCRTVVSWNVMIAGYAE 116
D++ E N V++N ++ +R G ++ AR MVF+ +P + ++N +I G
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI-TYNSLIKGLCR 576
Query: 117 NGAMDEARALFDQM----EFRNVITWTSMISGYCRAGNVEAA 154
G +D+AR+LF++M + I+ +I+G CR+G VE A
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVFDVM 68
T N ++ G + ++EA M R +++ ++ G GRV+ A+ +F +
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 69 PEKNVVSWNAMVGGLVRNGGLEGAR-----MVFEQTPCRTVVSWNVMIAGYAENGAMDEA 123
P+ +V +N ++ G V +G L+ A+ MV V ++N +I GY + G + A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 124 RALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+ M + NV ++T ++ G+C+ G ++ AY +
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK 71
+T +++G + G +D A+ F +P+ +V + ++ G+ GR++DA+ V M
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 72 -----NVVSWNAMVGGLVRNGGLEGARMVF---EQTPCR-TVVSWNVMIAGYAENGAMDE 122
+V ++N+++ G + G + A V C+ V S+ +++ G+ + G +DE
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 123 ARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
A + ++M N + + +IS +C+ + A
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 73.6 bits (179), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 86/151 (56%), Gaps = 13/151 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRVEDARRVF 65
++VT N +++G+ +S +DE F M +R +V ++ ++ GY AGR + A+ +F
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 66 DVMPEK-NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMIAGYAENGAM 120
M + N+ +++ ++ GL N +E A ++FE + ++N++I G + G +
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 121 DEARALFDQMEFR----NVITWTSMISGYCR 147
++A LF + + +V+++T+MISG+CR
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 70.1 bits (170), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 95/202 (47%), Gaps = 50/202 (24%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVE 59
D++P N++T A++ +++ G EA +E M R +V ++ +++ G GRV+
Sbjct: 239 DIVP--NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 60 DARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMI 111
+A+++ D+M K +VV++N ++ G ++ ++ +F + R +V ++N +I
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 112 AGYAENGAMDEARALFDQMEFR------------------------------------NV 135
GY + G D A+ +F +M+ R ++
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416
Query: 136 ITWTSMISGYCRAGNVEAAYGL 157
T+ +I G C+ GNVE A+ L
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDL 438
Score = 62.8 bits (151), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 13/143 (9%)
Query: 2 LFDVMPHRNIV----TCNAMLSGYLQSGMLDEARWFFESMPER-NVVSWTAMLGGYADAG 56
LF M R +V T N ++ GY Q+G D A+ F M R N+ +++ +L G
Sbjct: 336 LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNW 395
Query: 57 RVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWN 108
RVE A +F+ M E ++ ++N ++ G+ + G +E A +F C+ VVS+
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 109 VMIAGYAENGAMDEARALFDQME 131
MI+G+ D++ L+ +M+
Sbjct: 456 TMISGFCRKRQWDKSDLLYRKMQ 478
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 73.2 bits (178), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 87/164 (53%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+I+T N ++ G+ +G D+ M +R NVV+++ ++ + G++ +A ++
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
M ++ N +++N+++ G + LE A + + + ++++N++I GY +
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+D+ LF +M R N +T+ +++ G+C++G +E A L
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 88/164 (53%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N +T N+++ G+ + L+EA + M + +++++ ++ GY A R++D +F
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
M + N V++N +V G ++G LE A+ +F++ R V VS+ +++ G +N
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G +++A +F ++E ++ + +I G C A V+ A+ L
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+ V N +L+G + EA + M E +++ ++ G G+V DA +
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 66 DVMPEK----NVVSWNAMVGGLVRNG----GLEGARMVFEQTPCRTVVSWNVMIAGYAEN 117
D M E N V++ ++ + ++G +E R + E+ V ++++I G ++
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAG 149
G++D A LF++ME + ++IT+ ++I G+C AG
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 31/164 (18%)
Query: 7 PHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFD 66
P ++ + ++ Y + G+++EAR F+ MP+R+VV+WTAM+ GYA + A F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 67 VMPEK-------------------NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW 107
M ++ V+++ A+V G+V G+EG+ V
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVD----------- 149
Query: 108 NVMIAGYAENGAMDEARAL-FDQMEFRNVITWTSMISGYCRAGN 150
N M+ YA EA L F ++ +N +TWT++I+G+ G+
Sbjct: 150 NAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGD 193
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ N++L Y + G L EA+ +F M ++++++W ++ + E A +F
Sbjct: 247 NLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE-ALLMFQRFE 305
Query: 70 EK----NVVSWNAMVGGLVR----NGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
+ N ++ ++V N G + +F + + V N +I YA+ G +
Sbjct: 306 SQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIP 365
Query: 122 EARALFDQM-EFRNVITWTSMISGYCRAG 149
+++ +F ++ + RN+++WTSM+ GY G
Sbjct: 366 DSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 8 HRNIVTCNAMLSGYLQSGML-DEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFD 66
++N+ NA++ Y + G + D R F E + RN+VSWT+M+ GY G +A +FD
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 67 VMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQ-------TPCRTVVSWNVMIAGYA 115
M + + + A++ G +E F P R + + V + G A
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 116 ENGAMDEARALFDQMEFR-NVITWTSMISGYCRA 148
G + EA L ++M F+ + TW +++ G C+A
Sbjct: 465 --GKIGEAYELVERMPFKPDESTWGAIL-GACKA 495
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.8 bits (177), Expect = 9e-14, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 91/169 (53%), Gaps = 22/169 (13%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRVE 59
D+ P +++T A++SG+ Q G + EA F M E + V++T ++ GY AG ++
Sbjct: 381 DITP--DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 60 DARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQT------PCRTVVSWNV 109
DA RV + M + NVV++ ++ GL + G L+ A + + P + ++N
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP--NIFTYNS 496
Query: 110 MIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
++ G ++G ++EA L + E + +T+T+++ YC++G ++ A
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERN----VVSWTAMLGGYADAGRVEDARRVF 65
+ V ++ G+ + G + A FF M R+ V+++TA++ G+ G + +A ++F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 66 DVM----PEKNVVSWNAMVGGLVRNGGLEGARMVFE---QTPCR-TVVSWNVMIAGYAEN 117
M E + V++ ++ G + G ++ A V Q C VV++ +I G +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 118 GAMDEARALFDQMEF----RNVITWTSMISGYCRAGNVEAAYGL 157
G +D A L +M N+ T+ S+++G C++GN+E A L
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRVEDARRVF 65
N+VT ++ G + G LD A M + N+ ++ +++ G +G +E+A ++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
+ V++ ++ ++G ++ A+ + ++ + T+V++NV++ G+ +
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G +++ L + M + N T+ S++ YC N++AA +
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+ + N ++ Q G + EA M + +V+S++ ++ GY G ++ ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
+VM K N + +++G L R L A F + + + V + +I G+ +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGN-VEAA 154
G + A F +M R +V+T+T++ISG+C+ G+ VEA
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.8 bits (177), Expect = 9e-14, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 91/169 (53%), Gaps = 22/169 (13%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRVE 59
D+ P +++T A++SG+ Q G + EA F M E + V++T ++ GY AG ++
Sbjct: 381 DITP--DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 60 DARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQT------PCRTVVSWNV 109
DA RV + M + NVV++ ++ GL + G L+ A + + P + ++N
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP--NIFTYNS 496
Query: 110 MIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
++ G ++G ++EA L + E + +T+T+++ YC++G ++ A
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERN----VVSWTAMLGGYADAGRVEDARRVF 65
+ V ++ G+ + G + A FF M R+ V+++TA++ G+ G + +A ++F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 66 DVM----PEKNVVSWNAMVGGLVRNGGLEGARMVFE---QTPCR-TVVSWNVMIAGYAEN 117
M E + V++ ++ G + G ++ A V Q C VV++ +I G +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 118 GAMDEARALFDQMEF----RNVITWTSMISGYCRAGNVEAAYGL 157
G +D A L +M N+ T+ S+++G C++GN+E A L
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRVEDARRVF 65
N+VT ++ G + G LD A M + N+ ++ +++ G +G +E+A ++
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
+ V++ ++ ++G ++ A+ + ++ + T+V++NV++ G+ +
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLH 574
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G +++ L + M + N T+ S++ YC N++AA +
Sbjct: 575 GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+ + N ++ Q G + EA M + +V+S++ ++ GY G ++ ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
+VM K N + +++G L R L A F + + + V + +I G+ +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGN-VEAA 154
G + A F +M R +V+T+T++ISG+C+ G+ VEA
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 72.8 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 16/157 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRVEDARRVF 65
++VT N +L G + ML EA F M ER + + T ++ G+ G +++A +F
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
M EK +VV++N ++ G + G ++ A+ ++ + T +S+++++
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 118 GAMDEARALFDQMEFRN----VITWTSMISGYCRAGN 150
G + EA ++D+M +N V+ SMI GYCR+GN
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
++VT N +L G+ + G +D A+ + M + + +S++ ++ G + +A RV+
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 66 DVMPEKN----VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMIAGYAEN 117
D M KN V+ N+M+ G R+G E+ V S+N +I G+
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 118 GAMDEARALFDQME------FRNVITWTSMISGYCRAGNVEAA 154
M +A L +ME +V T+ S++ G+CR ++ A
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT N ++S Y G+++EA +MP + V ++ ++ G G+ E A+ VF
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 66 DVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS----WNVMIAGYAEN 117
M + ++ +++ + G + VF R VV ++ M++ + +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 118 GAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAAYGL 157
G +D+A F+ ++ +I +T +I GYCR G + A L
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 37/162 (22%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVS----WTAMLGGYADAGRVE 59
DV+P ++V ++M+S + +SG LD+A +F S+ E ++ +T ++ GY G +
Sbjct: 370 DVVP--DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 60 DARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA 119
A + + M +Q VV++N ++ G +
Sbjct: 428 VAMNLRNEM---------------------------LQQGCAMDVVTYNTILHGLCKRKM 460
Query: 120 MDEARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
+ EA LF++M F + T T +I G+C+ GN++ A L
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Score = 47.0 bits (110), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 61/118 (51%), Gaps = 12/118 (10%)
Query: 52 YADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----T 103
Y A ++ +A F ++ K ++ + NA++G LVR G +E A V+++
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGIN 234
Query: 104 VVSWNVMIAGYAENGAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
V + N+M+ ++G M++ Q++ + +++T+ ++IS Y G +E A+ L
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 84/164 (51%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N++T N M+ + SG +A M E+ ++V+++A++ + +V +A ++
Sbjct: 44 NVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIY 103
Query: 66 DVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
M +++N+M+ G + ++ A+ + + + VV+++ +I GY +
Sbjct: 104 KEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA 163
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+D +F +M R N +T+T++I G+C+ G+++AA L
Sbjct: 164 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 207
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 32/180 (17%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM-------------------PER-NVVSWTAML 49
NIVT +A++ G+ ++G +++A FE M ER NVV++ A+L
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646
Query: 50 GGYADAGRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMV----FEQTPC 101
G+ + RVE+AR++ D M E N + ++A++ GL + G L+ A+ V E
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706
Query: 102 RTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
T+ +++ +I Y + D A + +M NV+ +T MI G C+ G + AY L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Score = 72.0 bits (175), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/191 (25%), Positives = 95/191 (49%), Gaps = 38/191 (19%)
Query: 1 MLFDVMPHRNIV----TCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGY 52
+LF+ M +V T M+ + ++G++++AR +F M E NVV++TA++ Y
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 53 ADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----- 103
A +V A +F+ M + N+V+++A++ G + G +E A +FE+ C +
Sbjct: 564 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM-CGSKDVPD 622
Query: 104 ----------------VVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMIS 143
VV++ ++ G+ ++ ++EAR L D M N I + ++I
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 144 GYCRAGNVEAA 154
G C+ G ++ A
Sbjct: 683 GLCKVGKLDEA 693
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 15/147 (10%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFD 66
+ T ++++ Y + D A M E NVV +T M+ G G+ ++A ++
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768
Query: 67 VMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENG 118
+M EK NVV++ AM+ G G +E + E+ + V V++ V+I +NG
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 828
Query: 119 AMDEARALFDQMEFRNVITWTSMISGY 145
A+D A L ++M+ + W + +GY
Sbjct: 829 ALDVAHNLLEEMKQTH---WPTHTAGY 852
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+V M+ G + G DEA + M E+ NVV++TAM+ G+ G++E +
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAE----- 116
+ M K N V++ ++ +NG L+ A + E+ W AGY +
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM---KQTHWPTHTAGYRKVIEGF 859
Query: 117 NGAMDEARALFDQM 130
N E+ L D++
Sbjct: 860 NKEFIESLGLLDEI 873
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+I +A++ Y + L A+ F+ M ++NVVSWTAM+ GY GR E+A ++F M
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363
Query: 70 EKNV----------VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA 119
+ +S A V L G + TV N ++ Y + G
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS--NSLVTLYGKCGD 421
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAG 149
+D++ LF++M R+ ++WT+M+S Y + G
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Score = 70.9 bits (172), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 44/179 (24%)
Query: 17 MLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSW 76
+L Y G + +A+ F + +RN V + +++GG G +EDA ++F M EK+ VSW
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSW 238
Query: 77 NAMVGGLVRNG------------GLEGARMVFEQTPCRTVVS------------------ 106
AM+ GL +NG ++G +M +Q P +V+
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKM--DQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 107 -----------WNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ +I Y + + A+ +FD+M+ +NV++WT+M+ GY + G E A
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEA 355
Score = 63.2 bits (152), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
+ N++++ Y + G +D++ F M R+ VSWTAM+ YA GR + ++FD M +
Sbjct: 406 VTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQ 465
Query: 71 KNV----VSWNAMVGGLVRNGGLEGARMVF-----EQTPCRTVVSWNVMIAGYAENGAMD 121
+ V+ ++ R G +E + F E ++ ++ MI ++ +G ++
Sbjct: 466 HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLE 525
Query: 122 EARALFDQMEF-RNVITWTSMISGYCRAGNVE 152
EA + M F + I WT+++S GN+E
Sbjct: 526 EAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 41/193 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD +P N+ + N +L Y ++G++ E FE +P+R+ V+W ++ GY+ +G V A
Sbjct: 63 VFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAA 122
Query: 62 RRVFDVM--------------------PEKNVVSWNAMVGGLVRNGGLEG---------- 91
+ ++ M VS + G V G E
Sbjct: 123 VKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLY 182
Query: 92 ----------ARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSM 141
A+ VF R V +N ++ G G +++A LF ME ++ ++W +M
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAM 241
Query: 142 ISGYCRAGNVEAA 154
I G + G + A
Sbjct: 242 IKGLAQNGLAKEA 254
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLG----GYADAGR 57
+FD M +N+V+ AM+ GY Q+G +EA F M + LG A+
Sbjct: 327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 58 VEDARRVFDVMPEKNVVSW----NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+E+ + ++ + N++V + G ++ + +F + R VSW M++
Sbjct: 387 LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA 446
Query: 114 YAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
YA+ G E LFD+M + +T T +IS RAG VE
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 36 SMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMV 95
++P + ++ YA ARRVFD +P+ N+ SWN ++ + G +
Sbjct: 35 ALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMEST 94
Query: 96 FEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
FE+ P R V+WNV+I GY+ +G + A ++ M
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Score = 52.0 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 76/193 (39%), Gaps = 42/193 (21%)
Query: 6 MPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF 65
+P+ N ++ Y AR F+ +P+ N+ SW +L Y+ AG + + F
Sbjct: 36 LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTF 95
Query: 66 DVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV--------------------- 104
+ +P+++ V+WN ++ G + GL GA + T R
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLS-GLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 105 VSWNVMIAG--------------------YAENGAMDEARALFDQMEFRNVITWTSMISG 144
VS I G YA G + +A+ +F ++ RN + + S++ G
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 145 YCRAGNVEAAYGL 157
G +E A L
Sbjct: 215 LLACGMIEDALQL 227
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ A+L Y G++ +R FE MP+RNVVSWT+++ GY+D G E+ ++ M
Sbjct: 76 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 135
Query: 70 ------EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW----NVMIAGYAENGA 119
+N +S GL+++ L R + Q + S N +I+ G
Sbjct: 136 GEGVGCNENSMSLVISSCGLLKDESL--GRQIIGQVVKSGLESKLAVENSLISMLGSMGN 193
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAY 155
+D A +FDQM R+ I+W S+ + Y + G++E ++
Sbjct: 194 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 229
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 11/158 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N + NA++S Y + G + E+R MP R+VV+W A++GGYA+ + A F M
Sbjct: 379 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 438
Query: 70 EK----------NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA 119
+ +V+S + G L+ G A +V V N +I YA+ G
Sbjct: 439 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK-NSLITMYAKCGD 497
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ ++ LF+ ++ RN+ITW +M++ G+ E L
Sbjct: 498 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 535
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE---- 70
N+++S G +D A + F+ M ER+ +SW ++ YA G +E++ R+F +M
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 71 --KNVVSWNAMVGGLVRNG----GLEG--ARMVFEQTPCRTVVSWNVMIAGYAENGAMDE 122
VS V G V + G+ G +M F+ C N ++ YA G E
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC----NTLLRMYAGAGRSVE 297
Query: 123 ARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
A +F QM +++I+W S+++ + G A GL
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 332
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 43/184 (23%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF----- 65
+ CN +L Y +G EA F+ MP ++++SW +++ + + GR DA +
Sbjct: 279 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 338
Query: 66 --------------------DVMPEKNVVSWNAMVGGLVRN--------------GGLEG 91
D + ++ +V GL N G +
Sbjct: 339 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 398
Query: 92 ARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCR 147
+R V Q P R VV+WN +I GYAE+ D+A A F M N IT S++S
Sbjct: 399 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 458
Query: 148 AGNV 151
G++
Sbjct: 459 PGDL 462
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ A+L Y G++ +R FE MP+RNVVSWT+++ GY+D G E+ ++ M
Sbjct: 93 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 152
Query: 70 ------EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW----NVMIAGYAENGA 119
+N +S GL+++ L R + Q + S N +I+ G
Sbjct: 153 GEGVGCNENSMSLVISSCGLLKDESL--GRQIIGQVVKSGLESKLAVENSLISMLGSMGN 210
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAY 155
+D A +FDQM R+ I+W S+ + Y + G++E ++
Sbjct: 211 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 246
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 11/158 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N + NA++S Y + G + E+R MP R+VV+W A++GGYA+ + A F M
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455
Query: 70 EK----------NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA 119
+ +V+S + G L+ G A +V V N +I YA+ G
Sbjct: 456 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK-NSLITMYAKCGD 514
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ ++ LF+ ++ RN+ITW +M++ G+ E L
Sbjct: 515 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 552
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE---- 70
N+++S G +D A + F+ M ER+ +SW ++ YA G +E++ R+F +M
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 71 --KNVVSWNAMVGGLVRNG----GLEG--ARMVFEQTPCRTVVSWNVMIAGYAENGAMDE 122
VS V G V + G+ G +M F+ C N ++ YA G E
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC----NTLLRMYAGAGRSVE 314
Query: 123 ARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
A +F QM +++I+W S+++ + G A GL
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 349
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 43/184 (23%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF----- 65
+ CN +L Y +G EA F+ MP ++++SW +++ + + GR DA +
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 66 --------------------DVMPEKNVVSWNAMVGGLVRN--------------GGLEG 91
D + ++ +V GL N G +
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 92 ARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCR 147
+R V Q P R VV+WN +I GYAE+ D+A A F M N IT S++S
Sbjct: 416 SRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 475
Query: 148 AGNV 151
G++
Sbjct: 476 PGDL 479
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 40/141 (28%)
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNG----GLEGARMVFEQ--TPCRTVV 105
Y GRV+ AR +FD+MP +N VSWN M+ G+VR G G+E R + + P V+
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 106 SWNVMIAG----------------------------------YAENGAMDEARALFDQME 131
+ V G Y G + +R +F++M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 132 FRNVITWTSMISGYCRAGNVE 152
RNV++WTS++ GY G E
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPE 142
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 72.4 bits (176), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 85/156 (54%), Gaps = 8/156 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ + ++ YL+ G + AR F+ + +R+VVSWTAM+ ++ G DA +F M
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH 105
Query: 70 EKNVVSWNAMVGGLVRN----GGL-EGARM--VFEQTPCR-TVVSWNVMIAGYAENGAMD 121
++V + G ++++ G L EG ++ E+ C ++ + +++ YA G M+
Sbjct: 106 REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKME 165
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
EAR FD M+ R++++W +MI GY + ++ L
Sbjct: 166 EARLQFDSMKERDLVSWNAMIDGYTANACADTSFSL 201
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 22/165 (13%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGR-VEDARRVFDV 67
R+ ++++ Y++ G L A E +R+++S TA++ G++ DA +F
Sbjct: 247 RSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKD 306
Query: 68 M------PEKNVVS---------WNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
M ++ VVS + +G + L+ +++ F+ V N +I
Sbjct: 307 MIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFD------VALGNSLID 360
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
YA++G +++A F++M+ ++V +WTS+I+GY R GN E A L
Sbjct: 361 MYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDL 405
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N++ +A+LS Y + G ++EAR F+SM ER++VSW AM+ GY + + +F +M
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
Query: 70 EKNVVSWNAMVGGLVRNGGL--------EGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
+ G L+R + E + + R+ ++ Y + G++
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGN 150
A L + + R++++ T++I+G+ + N
Sbjct: 267 NAWKLHEGTKKRDLLSCTALITGFSQQNN 295
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 9 RNIVTCNAMLSGY-LQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRVEDARR 63
R++++C A+++G+ Q+ +A F+ M + + V ++ML V R+
Sbjct: 278 RDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQ 337
Query: 64 VFDVMPEKNVVSW-----NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENG 118
+ + + + + N+++ ++G +E A + FE+ + V SW +IAGY +G
Sbjct: 338 IHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHG 397
Query: 119 AMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAY 155
++A L+++ME N +T+ S++S G E +
Sbjct: 398 NFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGW 438
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK--- 71
N+++ Y +SG +++A FE M E++V SWT+++ GY G E A +++ M +
Sbjct: 356 NSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK 415
Query: 72 -NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS-----WNVMIAGYAENGAMDEARA 125
N V++ +++ G E +++ + + + +I A +G ++EA A
Sbjct: 416 PNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYA 475
Query: 126 LFDQME---FRNVITWTSMISGYCRAGNVE 152
L E + TW + + R GNV+
Sbjct: 476 LIRSKEGIVSLSSSTWGAFLDACRRHGNVQ 505
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
+LF V +I A+L+ Y +S L +AR FESM RNVVSW AM+ G+A G +
Sbjct: 266 ILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGRE 325
Query: 61 ARRVFDVMPEKNV----VSWNAMVGGLVRNGGL----EGARMVFEQTPCRTVVSWNVMIA 112
A R+F M +N+ +++ +++ + + + MV ++ + N +I+
Sbjct: 326 AMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLIS 385
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
Y+ NG + EA F + ++++WTS+I G E +
Sbjct: 386 SYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEES 427
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM-PEKN-----VV 74
Y + G++ EAR FE++ +R++V W A++ Y G +++A + +M +KN
Sbjct: 187 YGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYF 246
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRN 134
++++++ G + ++F+ + + ++ YA++ + +AR F+ M RN
Sbjct: 247 TFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRN 306
Query: 135 VITWTSMISGYCRAGNVEAAYGL 157
V++W +MI G+ + G A L
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRL 329
Score = 46.6 bits (109), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 38/57 (66%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK 71
N+++S Y ++G L EA F S+ E ++VSWT+++G A G E++ ++F+ M +K
Sbjct: 381 NSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK 437
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 16/156 (10%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVS----WTAMLGGYADAGRVEDARRVFDVMPE 70
N ++SG ++G A+ F M +RN++ + ++ G+ +G ++AR+VF + E
Sbjct: 454 NMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE 513
Query: 71 K----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMIAGYAENGAMDE 122
K +VV NAM+ G R+G L+ A + +V +++ +I GY + M
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 123 ARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
A +F ME NV+T+TS+I+G+C G+ + A
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 81/161 (50%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVS----WTAMLGGYADAGRVEDARRVF 65
+IVT ++ G + SG +D+A + +R V + ++ G GR A+ +F
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 66 DVMPEKNVVS----WNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAEN 117
M ++N++ + ++ G +R+G + AR VF E+ VV N MI G+ +
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 118 GAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAA 154
G +DEA A ++M +++ T++++I GY + ++ A
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATA 574
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGR 57
L+D +P +++ CN++LS ++S L +AR ++ M +R + S ++ G + G+
Sbjct: 163 LYDSVP--DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGK 220
Query: 58 VEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNV 109
VE R++ + K N+V +N ++GG + G +E A +VF++ + T+ ++
Sbjct: 221 VEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGT 280
Query: 110 MIAGYAENGAMDEARALFDQMEFRNV 135
MI G+ + G + L +++ R +
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGL 306
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 80/155 (51%), Gaps = 17/155 (10%)
Query: 17 MLSGYLQSGMLDEARWFFESMPE-----RNVVSWTAMLGGYADAGRVEDARRVFDVMPEK 71
+L Y +SG L +A ++ + E +V++ ++L + R+ DAR+V+D M ++
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 72 ----NVVSWNAMVGGLVRNGGLEGARMVFE----QTPCRTVVSWNVMIAGYAENGAMDEA 123
+ S +V G+ G +E R + E + +V +N +I GY + G ++ A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 124 RALFDQMEFRNVI----TWTSMISGYCRAGNVEAA 154
+F +++ + + T+ +MI+G+C+ G+ A+
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 77/155 (49%), Gaps = 17/155 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRVEDARRVF 65
++V NAM+ G+ +SGMLDEA M E ++V +++ ++ GY + A ++F
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYA-E 116
M + NVV++ +++ G G + A F++ R VV++ +I A E
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 117 NGAMDEARALFDQMEFR----NVITWTSMISGYCR 147
+ +++A ++ M N +T+ ++ G+ +
Sbjct: 639 SSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 67/121 (55%), Gaps = 13/121 (10%)
Query: 48 MLGGYADAGRVEDARRVFDVMPE-----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR 102
+L YA++G + A ++D + E +V++ N+++ LV++ L AR V+++ R
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 103 --TVVSWN--VMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+V +++ +++ G G ++ R L + + N++ + ++I GYC+ G++E A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 155 Y 155
Y
Sbjct: 260 Y 260
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMV 80
Y + L AR F+ MPERN++S+ +++ GY G E A +F E N+
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 81 GGLVRNGGLEGAR-----------MVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
G + G G R +V + V NV+I Y++ G +D+A +LFD+
Sbjct: 152 AGAL---GFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR 208
Query: 130 MEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ R+ ++W S+ISGY R G E L
Sbjct: 209 CDERDQVSWNSLISGYVRVGAAEEPLNL 236
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 81/225 (36%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLG------- 50
LFD MP RNI++ N+++SGY Q G ++A F E N+ ++ LG
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCD 163
Query: 51 ----------------------------GYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
Y+ G+++ A +FD E++ VSWN+++ G
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 83 LVRNGGLEGARMVFEQT----------------------------------PCRT----- 103
VR G E + + C T
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 104 ---VVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGY 145
+V ++ YA+NG++ EA LF M +NV+T+ +MISG+
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF 328
Score = 53.5 bits (127), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGML-----DEARWFFESMPERNV----VSWTAMLGGY 52
LF +MP +N+VT NAM+SG+LQ + EA F M R + +++ +L
Sbjct: 309 LFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKAC 368
Query: 53 ADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVR----NGGLEGARMVFEQTPCRTVVSWN 108
+ A +E R++ ++ + N S + L+ G E F T + + SW
Sbjct: 369 SAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWT 428
Query: 109 VMIAGYAENGAMDEARALFDQM 130
MI + +N ++ A LF Q+
Sbjct: 429 SMIDCHVQNEQLESAFDLFRQL 450
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 47/174 (27%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
+ + N ++ Y + G LD+A F+ ER+ VSW +++ GY G E+ + M
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM 240
Query: 69 P------------------------------------------EKNVVSWNAMVGGLVRN 86
E ++V A++ +N
Sbjct: 241 HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKN 300
Query: 87 GGLEGARMVFEQTPCRTVVSWNVMIAGYAE-----NGAMDEARALFDQMEFRNV 135
G L+ A +F P + VV++N MI+G+ + + A EA LF M+ R +
Sbjct: 301 GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGL 354
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 13/161 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED--------- 60
+IV A+L Y ++G L EA F MP +NVV++ AM+ G+ + D
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 61 ----ARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAE 116
RR + P V A G + ++ + + +I YA
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 117 NGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
G+ ++ F +++ +WTSMI + + +E+A+ L
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDL 446
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+++ ++L Y + G + A F M +RN+V+W M+G YA GRV DA F M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 70 EKN------VVSWNAMVGGLVRNG-GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDE 122
E+N + S N + + G + G M P +V +I Y E G +
Sbjct: 326 EQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLP--HMVLETALIDMYGECGQLKS 383
Query: 123 ARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
A +FD+M +NVI+W S+I+ Y + G +A L
Sbjct: 384 AEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 44/197 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN-------------------- 41
+F+ M RNIV N M+ Y ++G + +A F+ M E+N
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE 348
Query: 42 ----------------VVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVR 85
+V TA++ Y + G+++ A +FD M EKNV+SWN+++ V+
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 86 NGGLEGARMVFEQTPCRTVVSWNVMIA----GYAENGAMDEARALF----DQMEFRNVIT 137
NG A +F++ ++V + IA YAE+ ++ E R + + N I
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 138 WTSMISGYCRAGNVEAA 154
S++ Y G++E A
Sbjct: 469 LNSLVHMYAMCGDLEDA 485
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAG 56
++FD M +N+++ N++++ Y+Q+G A F+ + + ++V + ++L YA++
Sbjct: 386 VIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESL 445
Query: 57 RVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
+ + R + + + N + N++V G LE AR F + VVSWN +I
Sbjct: 446 SLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIM 505
Query: 113 GYAENGAMDEARALFDQM 130
YA +G + LF +M
Sbjct: 506 AYAVHGFGRISVWLFSEM 523
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGR 57
LFD M + N M+ G+ G+ EA F+ M + + ++ ++ A
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 58 VEDARRVFDVMPEKNVVS----WNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+E+ +++ ++ + VS N+++ ++ G A VFE+ P R +VSWN MI+G
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 114 YAENGAMDEARALFDQM 130
Y G + LF +M
Sbjct: 206 YLALGDGFSSLMLFKEM 222
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Query: 18 LSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP----EKNV 73
L G+ S ++++A F+ M + + W M+ G+ G +A + + M + +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 74 VSWNAMVGGLVRNGGLEGAR----MVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
++ ++ + LE + MV + V N +I+ Y + G +A +F++
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 130 MEFRNVITWTSMISGYCRAGN 150
M R++++W SMISGY G+
Sbjct: 191 MPERDIVSWNSMISGYLALGD 211
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
I N++L Y G + A F+ MPE+++V+W +++ G+A+ G+ E+A ++ M
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 71 KNV----VSWNAMVGGLVRNGGLEGARMV----FEQTPCRTVVSWNVMIAGYAENGAMDE 122
K + + +++ + G L + V + R + S NV++ YA G ++E
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 123 ARALFDQMEFRNVITWTSMISG 144
A+ LFD+M +N ++WTS+I G
Sbjct: 143 AKTLFDEMVDKNSVSWTSLIVG 164
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
+FD MP +++V N++++G+ ++G +EA + M + + + ++L A G
Sbjct: 45 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 104
Query: 58 VEDARRVFDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+ +RV M + +N+ S N ++ R G +E A+ +F++ + VSW +I G
Sbjct: 105 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 164
Query: 114 YAENGAMDEARALFDQME 131
A NG EA LF ME
Sbjct: 165 LAVNGFGKEAIELFKYME 182
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
RN+ + N +L Y + G ++EA+ F+ M ++N VSWT+++ G A G ++A +F M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 69 --PEKNVVSWNAMVG--------GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENG 118
E + VG G+V+ G RM E + + M+ A G
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 241
Query: 119 AMDEARALFDQMEFR-NVITWTSMISGYCRAGNVEAA 154
+ +A M + NV+ W +++ G+ + A
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 8/143 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV- 73
N++L Y G + A F+ MPE+++V+W +++ G+A+ G+ E+A ++ M K +
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 74 ---VSWNAMVGGLVRNGGLE-GARM---VFEQTPCRTVVSWNVMIAGYAENGAMDEARAL 126
+ +++ + G L G R+ + + R + S NV++ YA G ++EA+ L
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 127 FDQMEFRNVITWTSMISGYCRAG 149
FD+M +N ++WTS+I G G
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNG 302
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
+FD MP +++V N++++G+ ++G +EA + M + + + ++L A G
Sbjct: 178 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 237
Query: 58 VEDARRVFDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+ +RV M + +N+ S N ++ R G +E A+ +F++ + VSW +I G
Sbjct: 238 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 297
Query: 114 YAENGAMDEARALFDQME 131
A NG EA LF ME
Sbjct: 298 LAVNGFGKEAIELFKYME 315
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
RN+ + N +L Y + G ++EA+ F+ M ++N VSWT+++ G A G ++A +F M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 69 --PEKNVVSWNAMVG--------GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENG 118
E + VG G+V+ G RM E + + M+ A G
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Query: 119 AMDEARALFDQMEFR-NVITWTSMISGYCRAGNVEAA 154
+ +A M + NV+ W +++ G+ + A
Sbjct: 375 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM-----PERNVVSWTAML---GGYA 53
+F M RN+ + N ++ GY + G DEA + M + +V ++ +L GG
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 54 DAGRVEDAR-RVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
D R ++ V E ++ NA++ V+ G ++ AR++F++ P R ++SWN MI+
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 113 GYAENGAMDEARALFDQMEFRNV----ITWTSMISG 144
GY ENG E LF M +V +T TS+IS
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYAD---AGRVEDARRVFD 66
+I CN++ YL +G EA F M +++VSWT M+ GY + D R+ D
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 67 ---VMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGA 119
V P++ V+S A +G L + G+E ++ + V+ N +I Y++
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDL--DTGVELHKLAIKARLISYVIVANNLINMYSKCKC 448
Query: 120 MDEARALFDQMEFRNVITWTSMISG 144
+D+A +F + +NVI+WTS+I+G
Sbjct: 449 IDKALDIFHNIPRKNVISWTSIIAG 473
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 18 LSGYLQSGMLDEARWFFESMPERNVVS----WTAMLGGYADAGRVEDARRVFDV----MP 69
L G +G L+EA SM E V + A++ E+ +V+ + M
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
V NA + VR G L A VF + R + SWNV++ GYA+ G DEA L+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 130 M 130
M
Sbjct: 186 M 186
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 43/180 (23%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA--------- 61
++ N +++ Y + +D+A F ++P +NV+SWT+++ G R +A
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492
Query: 62 ----------------RRVFDVMPEKNVVSW-------------NAMVGGLVRNGGLEGA 92
R+ +M K + + NA++ VR G + A
Sbjct: 493 TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA 552
Query: 93 RMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRA 148
F + V SWN+++ GY+E G LFD+M V IT+ S++ G ++
Sbjct: 553 WSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKS 611
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDV-M 68
+I +++ Y ++G++++ F MPERN +W+ M+ GYA GRVE+A +VF++ +
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 69 PEKNVVS-----WNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW----NVMIAGYAENGA 119
EK S + A++ L + R + T ++ + N ++ Y++ +
Sbjct: 212 REKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES 271
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAG 149
++EA +FD RN ITW++M++GY + G
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 43/190 (22%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
R++ A++ Y ++G L +AR F+ + ER+V WT+++ GY E+A ++ M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 69 PEKNVVSWNAMVGGLVRN---------------------------------------GGL 89
++ + + +++ G L
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSL 474
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGY 145
E +VF +TP + VVSWN MI+G + NG DEA LF++M + +T+ ++IS
Sbjct: 475 EDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISAC 534
Query: 146 CRAGNVEAAY 155
G VE +
Sbjct: 535 SHKGFVERGW 544
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
+ NA+++ Y + L+EA F+S +RN ++W+AM+ GY+ G +A ++F M
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315
Query: 71 KNVVSWNAMVGGLVRNGG----LEGARMV--------FEQTPCRTVVSWNVMIAGYAENG 118
+ + G++ LE + + FE R + + ++ YA+ G
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE----RHLFATTALVDMYAKAG 371
Query: 119 AMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ +AR FD ++ R+V WTS+ISGY + + E A
Sbjct: 372 CLADARKGFDCLQERDVALWTSLISGYVQNSDNEEA 407
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 92/234 (39%), Gaps = 78/234 (33%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM------P----------------- 38
+FD RN +T +AM++GY Q+G EA F M P
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337
Query: 39 ----------------ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
ER++ + TA++ YA AG + DAR+ FD + E++V W +++ G
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 397
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAG----------------------------- 113
V+N E A +++ + ++ + +A
Sbjct: 398 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 114 ----------YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
Y++ G++++ +F + ++V++W +MISG G + A L
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALEL 511
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRV---FDVMPEK 71
N +++ Y + G L +A F ++ ++VVSW +++ GY+ G + + V F M +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 72 NVVSWNAMVGGLVR--------NGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEA 123
+++ + G+ + G + +V + + + ++ Y + G +++
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 124 RALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+F M RN TW++M+SGY G VE A
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEA 203
Score = 53.5 bits (127), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFF-------ESMPERNVVSWTAMLGGYAD 54
+F MP RN T + M+SGY G ++EA F E + + V +TA+L A
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAA 233
Query: 55 AGRVEDARRVFDVMPEKNVVSWNAMVGGLV----RNGGLEGARMVFEQTPCRTVVSWNVM 110
V R++ + + ++ + A+ LV + L A +F+ + R ++W+ M
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAM 293
Query: 111 IAGYAENGAMDEARALFDQM 130
+ GY++NG EA LF +M
Sbjct: 294 VTGYSQNGESLEAVKLFSRM 313
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 70.9 bits (172), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ C+++L+ Y++ G +DEA F M +R+V+ WT M+ G+A AG+ A + M
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 70 EKNVVSWNAMVGGLVR-NGGLEGARM-------VFEQTPCRTVVSWNVMIAGYAENGAMD 121
+ ++ GL++ +G L +M ++ VV ++ YA+ G ++
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAAY 155
A +F +M F+ ++W S+ISG+ + G A+
Sbjct: 270 VASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF 303
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER-------NVVSWTAMLGGYAD 54
+F M + V+ +++SG+ Q+G+ ++A FE++ E ++V+ +L +
Sbjct: 274 VFSRMMFKTAVSWGSLISGFAQNGLANKA---FEAVVEMQSLGFQPDLVTLVGVLVACSQ 330
Query: 55 AGRVEDARRVFDVMPEKNV---VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
G ++ R V + +++V V+ A++ + G L +R +FE + +V WN MI
Sbjct: 331 VGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMI 390
Query: 112 AGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
+ Y +G E +LF +M N+ T+ S++S +G VE
Sbjct: 391 SCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVE 435
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAG 56
+LF M R+++ M++G+ Q+G +A F+ M R+ V +L D G
Sbjct: 172 VLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLG 231
Query: 57 RVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
+ R V + NVV ++V + G +E A VF + +T VSW +I+
Sbjct: 232 DTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLIS 291
Query: 113 GYAENGAMDEARALFDQME 131
G+A+NG ++A +M+
Sbjct: 292 GFAQNGLANKAFEAVVEMQ 310
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+V +++ Y + G ++ A F M + VSW +++ G+A G A + F+ +
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGL---ANKAFEAVV 307
Query: 70 EKNVVSWN----AMVGGLV---RNGGLEGARMVFEQTPCRTV---VSWNVMIAGYAENGA 119
E + + +VG LV + G L+ R+V R V V+ ++ Y++ GA
Sbjct: 308 EMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGA 367
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGN 150
+ +R +F+ + ++++ W +MIS Y GN
Sbjct: 368 LSSSREIFEHVGRKDLVCWNTMISCYGIHGN 398
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVS 75
++L+ Y G L A+ F+ +++ +W +++ YA AG ++DAR++FD MPE+NV+S
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVIS 161
Query: 76 WNAMVGGLVRNGGLEGARMVFEQ----TPCRTVVSWN-----VMIAGYAENGAMDEAR-- 124
W+ ++ G V G + A +F + P V N +++ GA+++ +
Sbjct: 162 WSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWV 221
Query: 125 -ALFDQMEFR-NVITWTSMISGYCRAGNVEAA 154
A D+ +++ T++I Y + G++E A
Sbjct: 222 HAYIDKYHVEIDIVLGTALIDMYAKCGSLERA 253
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 46 TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV 105
T++L Y+ G + A+RVFD K++ +WN++V + G ++ AR +F++ P R V+
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVI 160
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEF---------RNVITWTSMISGYCRAGNVE 152
SW+ +I GY G EA LF +M+ N T ++++S R G +E
Sbjct: 161 SWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALE 216
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD +++ N++++ Y ++G++D+AR F+ MPERNV+SW+ ++ GY G+ ++A
Sbjct: 119 VFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEA 178
Query: 62 RRVFDVM----PEKNVVSWNAMVGGLV-----RNGGLEGARMVFEQTPCRTV----VSWN 108
+F M P + V N V R G LE + V V V
Sbjct: 179 LDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGT 238
Query: 109 VMIAGYAENGAMDEARALFDQM-EFRNVITWTSMI 142
+I YA+ G+++ A+ +F+ + ++V +++MI
Sbjct: 239 ALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 87 GGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYC 146
G L A+ VF+ + + + +WN ++ YA+ G +D+AR LFD+M RNVI+W+ +I+GY
Sbjct: 111 GDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYV 170
Query: 147 RAGNVEAAYGL 157
G + A L
Sbjct: 171 MCGKYKEALDL 181
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 20/173 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYA 53
L D M R ++VT N +++G + G LDEA F MP + NV++ +L
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTP---CR-TVV 105
GR DA ++ M K +VV++N ++ L R G L A + E+ P C+ +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
S+N ++ G+ + MD A ++M R +++T+ +M++ C+ G VE A
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 13/153 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP-ERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
+++T N M+SGY ++G ++ A + M +VV++ +L D+G+++ A V D M
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 69 PEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAM 120
++ +V+++ ++ R+ G+ A + ++ R VV++NV++ G + G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 121 DEARALFDQMEFR----NVITWTSMISGYCRAG 149
DEA + M NVIT ++ C G
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Score = 59.7 bits (143), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
+ + MP N ++ N +L G+ + +D A + E M R ++V++ ML
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 54 DAGRVEDARRVFDVMPEKN----VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----V 105
G+VEDA + + + K ++++N ++ GL + G A + ++ + + +
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+++ ++ G + G +DEA F + E N +T+ S++ G C++ + A
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDV 67
V N L +++G L+E F E+M +++ T ++ G+ G+ A ++ ++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 68 MPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR-TVVSWNVMIAGYAENGAMDE 122
+ +V+++N M+ G + G + A V ++ VV++N ++ ++G + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 123 ARALFDQMEFRN----VITWTSMISGYCRAGNVEAAYGL 157
A + D+M R+ VIT+T +I CR V A L
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 46/188 (24%)
Query: 4 DVMPHR-NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDAR 62
+V HR N+ CNA++S Y + G +D AR F+ M ER+ VSW A++ Y ++ +A
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 63 RVFDVM----PEKNVVSWNAMVGGLVRNGGLEGA-----------------RMVFEQTPC 101
++ D M E ++V+WN + GG + G GA M+ C
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 102 RTV--VSW----------------------NVMIAGYAENGAMDEARALFDQMEFRNVIT 137
+ + W N +I Y+ + A +F Q+E ++ T
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 138 WTSMISGY 145
W S+ISG+
Sbjct: 391 WNSIISGF 398
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP----E 70
N++++ Y + L A F+ + ++ +W +++ G+A R E+ + M
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 71 KNVVSWNAMVGGLVRNGGLEGAR-----MVFEQTPCRTVVSWNVMIAGYAENGAMDEARA 125
N ++ +++ R G L+ + ++ Q+ ++ WN ++ YA++G + A+
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 126 LFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+FD M R+ +T+TS+I GY R G E A
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 49/200 (24%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGR 57
LFD M R+ V+ NA+++ Y L EA + M E ++V+W + GG +AG
Sbjct: 241 LFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN 300
Query: 58 VEDARRVFDVMPEKNV-VSWNAMVGGL-------------------------------VR 85
A M NV + AM+ GL VR
Sbjct: 301 YIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR 360
Query: 86 N---------GGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR--- 133
N L A +VF+Q ++ +WN +I+G+A N +E L +M
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 134 -NVITWTSMISGYCRAGNVE 152
N IT S++ + R GN++
Sbjct: 421 PNHITLASILPLFARVGNLQ 440
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 8 HRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN-----VVSWTAMLGGYADAGRVEDAR 62
H N +T ++L + + G L + F + R ++ W +++ YA +G + A+
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 63 RVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENG 118
RVFD M +++ V++ +++ G R G E A F+ + V+ +++ + +
Sbjct: 480 RVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSN 539
Query: 119 AMDEARALFDQMEFRNVIT-----WTSMISGYCRAGNVEAA 154
+ E LF +ME I ++ M+ YCRAG ++ A
Sbjct: 540 LVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 43/177 (24%)
Query: 17 MLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK----- 71
+++ Y +LDEA+ E+ + + W ++G Y R +++ V+ M K
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 72 ----------------------------------NVVSWNAMVGGLVRNGGLEGARMVFE 97
N+ NA++ R G ++ AR +F+
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 98 QTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGN 150
+ R VSWN +I Y + EA L D+M V +TW ++ G AGN
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN 300
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 46/188 (24%)
Query: 4 DVMPHR-NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDAR 62
+V HR N+ CNA++S Y + G +D AR F+ M ER+ VSW A++ Y ++ +A
Sbjct: 211 EVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAF 270
Query: 63 RVFDVM----PEKNVVSWNAMVGGLVRNGGLEGA-----------------RMVFEQTPC 101
++ D M E ++V+WN + GG + G GA M+ C
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 102 RTV--VSW----------------------NVMIAGYAENGAMDEARALFDQMEFRNVIT 137
+ + W N +I Y+ + A +F Q+E ++ T
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 138 WTSMISGY 145
W S+ISG+
Sbjct: 391 WNSIISGF 398
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP----E 70
N++++ Y + L A F+ + ++ +W +++ G+A R E+ + M
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 71 KNVVSWNAMVGGLVRNGGLEGAR-----MVFEQTPCRTVVSWNVMIAGYAENGAMDEARA 125
N ++ +++ R G L+ + ++ Q+ ++ WN ++ YA++G + A+
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 126 LFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+FD M R+ +T+TS+I GY R G E A
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVA 509
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 49/200 (24%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGR 57
LFD M R+ V+ NA+++ Y L EA + M E ++V+W + GG +AG
Sbjct: 241 LFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN 300
Query: 58 VEDARRVFDVMPEKNV-VSWNAMVGGL-------------------------------VR 85
A M NV + AM+ GL VR
Sbjct: 301 YIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR 360
Query: 86 N---------GGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR--- 133
N L A +VF+Q ++ +WN +I+G+A N +E L +M
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 134 -NVITWTSMISGYCRAGNVE 152
N IT S++ + R GN++
Sbjct: 421 PNHITLASILPLFARVGNLQ 440
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 8 HRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN-----VVSWTAMLGGYADAGRVEDAR 62
H N +T ++L + + G L + F + R ++ W +++ YA +G + A+
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 63 RVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENG 118
RVFD M +++ V++ +++ G R G E A F+ + V+ +++ + +
Sbjct: 480 RVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSN 539
Query: 119 AMDEARALFDQMEFRNVIT-----WTSMISGYCRAGNVEAA 154
+ E LF +ME I ++ M+ YCRAG ++ A
Sbjct: 540 LVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 43/177 (24%)
Query: 17 MLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK----- 71
+++ Y +LDEA+ E+ + + W ++G Y R +++ V+ M K
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 72 ----------------------------------NVVSWNAMVGGLVRNGGLEGARMVFE 97
N+ NA++ R G ++ AR +F+
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 98 QTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGN 150
+ R VSWN +I Y + EA L D+M V +TW ++ G AGN
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN 300
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 70.5 bits (171), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 79/143 (55%), Gaps = 8/143 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N +LS Y + G L +AR F+ MPERN+VS+T+++ GY+ G+ +A R++ M ++++V
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
Query: 75 SWNAMVGGLVRNG--------GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARAL 126
G +++ G + V + +++ N +IA Y M +A +
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRV 225
Query: 127 FDQMEFRNVITWTSMISGYCRAG 149
F + +++I+W+S+I+G+ + G
Sbjct: 226 FYGIPMKDLISWSSIIAGFSQLG 248
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP----E 70
N ++ Y + G L +AR F+SM R+VVSW+ ++ GYA +G E+A +F M E
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
Query: 71 KNVVSWNAMVG-----GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARA 125
N V++ ++ GLV G A M E T + ++ A G ++EA
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAER 631
Query: 126 LFDQMEFR-NVITWTSMISGYCRAGNVEAA 154
D+M+ +V+ W +++S GNV A
Sbjct: 632 FIDEMKLEPDVVVWKTLLSACKTQGNVHLA 661
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 40/161 (24%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM- 68
+++ NA+++ Y++ + +A F +P ++++SW++++ G++ G +A M
Sbjct: 202 HLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEML 261
Query: 69 ------------------------PE----------KNVVSWNAMVGG-----LVRNGGL 89
P+ K+ ++ NA+ G R G L
Sbjct: 262 SFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFL 321
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
AR VF+Q SWNV+IAG A NG DEA ++F QM
Sbjct: 322 NSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM 362
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 70.5 bits (171), Expect = 5e-13, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFF----ESMPERNVVSWTAMLGGYADAGR 57
+FD MP ++IV N+++SG+ Q+G+ DEA F ES E + ++ ++L A G
Sbjct: 164 VFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGA 223
Query: 58 VEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
V V + + NV A++ R G + AR VF++ V +W MI+
Sbjct: 224 VSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISA 283
Query: 114 YAENGAMDEARALFDQME-----FRNVITWTSMISGYCRAGNVE 152
Y +G +A LF++ME N +T+ +++S AG VE
Sbjct: 284 YGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVE 327
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVS 75
A+++ Y + G ++ AR F+ MPE+++V+W +++ G+ G ++A +VF M E
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 76 WNAMVGGLVRNGGLEGA--------RMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALF 127
+A L+ GA + + + V +I Y+ G + +AR +F
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 128 DQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
D+M+ NV WT+MIS Y G + A L
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVEL 296
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 23/156 (14%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM- 68
N+ A+++ Y + G + +AR F+ M E NV +WTAM+ Y G + A +F+ M
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKME 301
Query: 69 ----PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV---------MIAGYA 115
P N V++ A++ G +E R V++ R S+ + M+
Sbjct: 302 DDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK----RMTKSYRLIPGVEHHVCMVDMLG 357
Query: 116 ENGAMDEARALFDQMEFRNVIT----WTSMISGYCR 147
G +DEA Q++ T WT+M+ G C+
Sbjct: 358 RAGFLDEAYKFIHQLDATGKATAPALWTAML-GACK 392
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 70.5 bits (171), Expect = 5e-13, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 93/237 (39%), Gaps = 80/237 (33%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP---------------------- 38
MLFD MP R+ V+ N M+SGY G L++A F M
Sbjct: 56 MLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVK 115
Query: 39 -----------------ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
E NV ++++ YA RVEDA F + E N VSWNA++
Sbjct: 116 RFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIA 175
Query: 82 GLVRNGGLEGARMVFEQTPCRTVVSW---------------------------------- 107
G V+ ++ A + + V+
Sbjct: 176 GFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQ 235
Query: 108 ------NVMIAGYAENGAMDEARALFDQM-EFRNVITWTSMISGYCRAGNVEAAYGL 157
N MI+ YA+ G++ +A+ +FD + +++I+W SMI+G+ + E+A+ L
Sbjct: 236 HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFEL 292
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 46/184 (25%)
Query: 15 NAMLSGYLQ--SGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKN 72
NA++S Y+Q +G +++A FES+ ++++SW +++ G+A G EDA + F +
Sbjct: 344 NALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE 403
Query: 73 V----VSWNAMV---------------------GGLVRN--------------GGLEGAR 93
+ +++A++ G V N G +E AR
Sbjct: 404 IKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESAR 463
Query: 94 MVFEQTPCR-TVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRA 148
F+Q + + V+WN MI GYA++G + LF QM +NV +T+T++++
Sbjct: 464 KCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHT 523
Query: 149 GNVE 152
G ++
Sbjct: 524 GLIQ 527
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 30/167 (17%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+I N +L Y++ G L A F+ MP+R+ VSW M+ GY G++EDA +F M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 70 E--------------KNVVS-----WNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVM 110
K + S V GLV GG E C V + +
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYE----------CNVYVG-SSL 142
Query: 111 IAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ YA+ +++A F ++ N ++W ++I+G+ + +++ A+ L
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWL 189
Score = 62.8 bits (151), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMP-ERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
I CNAM+S Y G + +A+ F+ + ++++SW +M+ G++ E A +F M
Sbjct: 238 ITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ 297
Query: 70 ----EKNVVSWNAMVGGL------VRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAE--N 117
E ++ ++ ++ + L G MV ++ + + N +I+ Y +
Sbjct: 298 RHWVETDIYTYTGLLSACSGEEHQIFGKSLHG--MVIKKGLEQVTSATNALISMYIQFPT 355
Query: 118 GAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
G M++A +LF+ ++ +++I+W S+I+G+ + G E A
Sbjct: 356 GTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDA 392
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 70.5 bits (171), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 18/168 (10%)
Query: 7 PHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER-----NVVSWTAMLGGYADAGRVEDA 61
P N V C+A++SG+ + G + A FFES + N+V++T ++ G+V++
Sbjct: 168 PFDNFV-CSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEV 226
Query: 62 R----RVFDVMPEKNVVSWNAMVGGLVRNGGLEGA----RMVFEQTPCRTVVSWNVMIAG 113
R R+ D E + V ++ + G + G L A R + E+ R VVS++++I G
Sbjct: 227 RDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDG 286
Query: 114 YAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++ G ++EA L +M N+IT+T++I G C+ G +E A+ L
Sbjct: 287 LSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVL 334
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRVEDARRVF 65
N +T N++++G Q G L EA F+S+ +V ++ ++ G DA ++
Sbjct: 689 NTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLL 748
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGA------RMVFEQTPCRTVVSWNVMIAGYA 115
D M K N++ +N++V G + G E A +M+ TP VS MI GY
Sbjct: 749 DSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVS--SMIKGYC 806
Query: 116 ENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
+ G M+EA ++F + + +N+ + +I G+C G +E A GL
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGL 852
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDA---- 61
N+VT ++S Q G +DE R + E + V ++ + GY G + DA
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGA-----RMVFEQTPCRTVVSWNVMIAGYAE 116
R + + ++VVS++ ++ GL + G +E A +M+ E ++++ +I G +
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE-PNLITYTAIIRGLCK 324
Query: 117 NGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
G ++EA LF+++ + + ++I G CR GN+ A+ +
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 8 HRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRVEDA-- 61
+R++V+ + ++ G + G ++EA M E N++++TA++ G G++E+A
Sbjct: 274 NRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFV 333
Query: 62 --RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYA 115
R+ V E + + ++ G+ R G L A + R +++++N +I G
Sbjct: 334 LFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLC 393
Query: 116 ENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEA 153
G + EA + + +VIT+++++ Y + N++A
Sbjct: 394 MAGRVSEADEV-SKGVVGDVITYSTLLDSYIKVQNIDA 430
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTA----MLGGYADAGRVEDARRVF 65
++V CN +L +L G EA + +MPE ++ TA M+ GY G++E+A +F
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Query: 66 DVMPEKNV---VSWNAMVGGLVRNGGLEGARMVF 96
+ + + +V V +N ++ L + G L+ A V
Sbjct: 506 NELRKSSVSAAVCYNRIIDALCKKGMLDTATEVL 539
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 17 MLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDVMPEKN 72
++ G + G L+ A M +R +++++ ++ G AGRV +A V + +
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVV-GD 411
Query: 73 VVSWNAMVGGLVR----NGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFD 128
V++++ ++ ++ + LE R E +V N+++ + GA EA AL+
Sbjct: 412 VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR 471
Query: 129 QMEFRNVI----TWTSMISGYCRAGNVEAA 154
M ++ T+ +MI GYC+ G +E A
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEA 501
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 70.5 bits (171), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 30/160 (18%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
+N++ N +++ Y + G + AR F++MPERNVVSWTA++ GY AG ++ +F M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 69 -----PEKNVVSW---------NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGY 114
P + +S V GL GL C V+ N +I+ Y
Sbjct: 154 LSHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLH----------CSIYVA-NAVISMY 202
Query: 115 A---ENGAMDEARALFDQMEFRNVITWTSMISGY--CRAG 149
+ A EA +F+ ++F+N++TW SMI+ + C G
Sbjct: 203 GRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLG 242
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 102 RTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ V+ N +I YA+ G + AR +FD M RNV++WT++I+GY +AGN + + L
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCL 149
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 70.1 bits (170), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 19/164 (11%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
NI T ++++G+ G +DEAR F M + +VV++T+++ G+ +V+DA ++F
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
M +K N +++ ++ G + G A+ VF R + ++NV++ N
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 118 GAMDEARALFDQMEFR-------NVITWTSMISGYCRAGNVEAA 154
G + +A +F+ M+ R N+ T+ ++ G C G +E A
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 19/167 (11%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++V ++++G+ + +D+A F M ++ N +++T ++ G+ G+ A+ VF
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR-------TVVSWNVMIAGY 114
M + N+ ++N ++ L NG ++ A M+FE R + ++NV++ G
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 115 AENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
NG +++A +F+ M R + IT+T +I G C+AG V+ A L
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT ++++G+ ++EA M E +VV +T ++ G V A +F
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMIAGYAEN 117
D M +VV + ++V GL +G A + R V+++N +I + +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 118 GAMDEARALFDQMEFR-----NVITWTSMISGYCRAGNVEAA 154
G +A L+++M R N+ T+TS+I+G+C G V+ A
Sbjct: 261 GKFLDAEELYNEM-IRMSIAPNIFTYTSLINGFCMEGCVDEA 301
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 1 MLFDVMPHR-------NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAML 49
M+F+ M R NI T N +L G +G L++A FE M +R + +++T ++
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467
Query: 50 GGYADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQ 98
G AG+V++A +F +P K NVV++ M+ GL R G A ++F +
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 70.1 bits (170), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 16/162 (9%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAML----------GG 51
LFD MP R+ + N ++ L+SG ++A F M ++ + + G
Sbjct: 45 LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEG 104
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
+A+ ++ V + E NV N+++ RNG LE +R VF R + SWN ++
Sbjct: 105 FAEGRQIHG--YVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSIL 162
Query: 112 AGYAENGAMDEARALFDQMEF----RNVITWTSMISGYCRAG 149
+ Y + G +D+A L D+ME +++TW S++SGY G
Sbjct: 163 SSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG 204
Score = 69.7 bits (169), Expect = 8e-13, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 43/182 (23%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ CN+++ Y ++G L+ +R F SM +RN+ SW ++L Y G V+DA + D M
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 70 ----EKNVVSWNAMVGGLVRNGGLEGARMVFEQ------TPCRTVVS------------- 106
+ ++V+WN+++ G G + A V ++ P + +S
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 107 --------------W------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYC 146
W +I Y + G + AR +FD M+ +N++ W S++SG
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 147 RA 148
A
Sbjct: 303 YA 304
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 47/192 (24%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM------PERNVVS------------------- 44
+IVT N++LSGY G+ +A + M P + +S
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 45 --------W------TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLE 90
W T ++ Y G + AR VFD+M KN+V+WN++V GL L+
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 91 GARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMI 142
A + + + ++WN + +GYA G ++A + +M+ + NV++WT++
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 368
Query: 143 SGYCRAGNVEAA 154
SG + GN A
Sbjct: 369 SGCSKNGNFRNA 380
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAG 56
M+FD+M +NIV N+++SG + +L +A M + + ++W ++ GYA G
Sbjct: 281 MVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG 340
Query: 57 RVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVF 96
+ E A V M EK NVVSW A+ G +NG A VF
Sbjct: 341 KPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Query: 17 MLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV--- 73
++ Y+++G L AR F+ M +N+V+W +++ G + A ++DA + M ++ +
Sbjct: 266 LIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPD 325
Query: 74 -VSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAENGAMDEARALFD 128
++WN++ G G E A V E+ VVSW + +G ++NG A +F
Sbjct: 326 AITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 129 QMEFRNV 135
+M+ V
Sbjct: 386 KMQEEGV 392
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 30 ARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLV----- 84
A F+ MP+R+ ++W ++ +G E A +F M ++++ + L+
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 85 RNGGLEGARM---VFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSM 141
+ G EG ++ V V N +I Y+ NG ++ +R +F+ M+ RN+ +W S+
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 142 ISGYCRAGNVEAAYGL 157
+S Y + G V+ A GL
Sbjct: 162 LSSYTKLGYVDDAIGL 177
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+F+ +P + V AM++ + G + AR FE MPER+ ++W AM+ GYA G +A
Sbjct: 165 VFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREA 224
Query: 62 RRVFDVMPEKNV----VSWNAMVGGLVRNGGLEGAR---MVFEQTPCRTVVSW-NVMIAG 113
VF +M + V V+ +++ + G L+ R E+ + V ++
Sbjct: 225 LNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDL 284
Query: 114 YAENGAMDEARALFDQMEFRNVITWTSMISG 144
YA+ G M++A +F ME +NV TW+S ++G
Sbjct: 285 YAKCGDMEKAMEVFWGMEEKNVYTWSSALNG 315
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDAR 62
FD PH ++S Y + G LD F S+P + V TAM+ A G V AR
Sbjct: 139 FDNDPHVQ----TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 63 RVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENG 118
++F+ MPE++ ++WNAM+ G + G A VF V V+ +++ + G
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 119 AMDEARALFDQMEFRNVITW-----TSMISGYCRAGNVEAA 154
A+D+ R +E RN I T+++ Y + G++E A
Sbjct: 255 ALDQGRWAHSYIE-RNKIKITVRLATTLVDLYAKCGDMEKA 294
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 40/177 (22%)
Query: 17 MLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSW 76
M+ Y +SG L A+ F+ MP+R+ V+ T M+ Y++ G +++A +F + K+ V W
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 223
Query: 77 NAMVGGLVRNGGLEGARMVFEQTPCRTVVS----------------------W------- 107
AM+ GLVRN + A +F + V + W
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN 283
Query: 108 ----------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG-NVEA 153
N +I Y+ G ++EAR +F M ++VI++ +MISG G +VEA
Sbjct: 284 QRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 43/191 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+FD MP R+ V M++ Y + G + EA F+ + ++ V WTAM+ G + A
Sbjct: 180 MFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKA 239
Query: 62 RRVFDVMPEKNVVS----------------------W-----------------NAMVGG 82
+F M +NV + W NA++
Sbjct: 240 LELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINM 299
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITW 138
R G + AR VF + V+S+N MI+G A +GA EA F M R N +T
Sbjct: 300 YSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTL 359
Query: 139 TSMISGYCRAG 149
++++ G
Sbjct: 360 VALLNACSHGG 370
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 35/166 (21%)
Query: 27 LDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVR- 85
+D A F + NV +TAM+ G+ +GR D ++ M +V+ N ++ +++
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA 136
Query: 86 ----------------------------------NGGLEGARMVFEQTPCRTVVSWNVMI 111
+G L A+ +F++ P R V+ VMI
Sbjct: 137 CDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMI 196
Query: 112 AGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
Y+E G + EA LF ++ ++ + WT+MI G R + A L
Sbjct: 197 NCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALEL 242
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 69.7 bits (169), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 91/173 (52%), Gaps = 20/173 (11%)
Query: 2 LFDVMPHRN----IVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
+FD + R+ +V+ N +++GY + G LDE M + +V +++A++
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVV 105
+++ A +FD M ++ N V + ++ G RNG ++ + +++ + +V
Sbjct: 322 KENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIV 381
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAA 154
+N ++ G+ +NG + AR + D M R + IT+T++I G+CR G+VE A
Sbjct: 382 LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 12/124 (9%)
Query: 41 NVVSWTAMLGGYADAGRVEDARRVFDVMPEKN----VVSWNAMVGGLVRNGGL-EGARMV 95
NV + ++ + G + DA++VFD + +++ VVS+N ++ G + G L EG R+
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 96 FEQTPCRT---VVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRA 148
+ RT V +++ +I + MD A LFD+M R N + +T++I G+ R
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 149 GNVE 152
G ++
Sbjct: 359 GEID 362
Score = 53.5 bits (127), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 72 NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAMDEARALF 127
NV +N ++ + G + A+ VF++ R TVVS+N +I GY + G +DE L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 128 DQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
QME +V T++++I+ C+ ++ A+GL
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGL 332
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
LFD M R N V ++ G+ ++G +D + ++ M + ++V + ++ G+
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391
Query: 54 DAGRVEDARRVFDVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----V 105
G + AR + D M + + +++ ++ G R G +E A + ++ + V
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
Query: 106 SWNVMIAGYAENG-AMDEARALFDQMEF---RNVITWTSMISGYCRAGNVEAAYGL 157
++ ++ G + G +D RAL + + + +T+T M+ +C+ G+ + + L
Sbjct: 452 GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKL 507
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
+IV N +++G+ ++G L AR + M R + +++T ++ G+ G VE A +
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIR 438
Query: 66 DVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
M + + V ++A+V G+ + G + A + + V++ +M+ + +
Sbjct: 439 KEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKK 498
Query: 118 GAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAA 154
G L +M+ +V+T+ +++G C+ G ++ A
Sbjct: 499 GDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 69.3 bits (168), Expect = 9e-13, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGR--- 57
+ F+ P R ++ N ++S Y + G L AR F+ MP+R++VSW ++L YA +
Sbjct: 66 LTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVV 123
Query: 58 --VEDARRVFDVMPEKNVVSWNAMVGGLVR---NGGLEGARMVFEQTPCRTVVSWNVMIA 112
++ A +F ++ + V + + +++ + G A F C+ + + +A
Sbjct: 124 ENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVA 183
Query: 113 G-----YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
G Y + G + E + LF++M +R+V+ W M+ Y G E A L
Sbjct: 184 GALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
+ +L Y++ G + A++ F+S+P + V+WT M+ G + G E A VF M V+
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 75 SWNAMVGGLVRNG----GLEGARMVFEQTPCRTVVS----WNVMIAGYAENGAMDEARAL 126
+ L + LE R + + ++ YA+ G++D+A L
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 127 FDQMEFRNVITWTSMISGYCRAG 149
F ++E N+ W +M+ G + G
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHG 698
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 69.3 bits (168), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 16/158 (10%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDVM 68
T +++G ++G+ + +E M E N+ ++ ++ GR +DA +VFD M
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 69 PEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAM 120
E+ N+V++N ++GGL R L A V +Q + +++N +I G+ G +
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 121 DEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+A +L ++ R +++T+ ++SG+CR G+ A
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+ T N +++ + G +A F+ M ER N+V++ ++GG ++ +A +V
Sbjct: 267 NLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVV 326
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
D M N++++N ++ G G L A + R ++V++N++++G+
Sbjct: 327 DQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 118 GAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
G A + +ME R + +T+T +I + R+ N+E A L
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
++VT N ++SG+ + G A + M ER + V++T ++ +A + +E A ++
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 66 DVMPEKNVV----SWNAMVGGLVRNGGLEGARMVFE---QTPCR-TVVSWNVMIAGYAEN 117
M E +V +++ ++ G G + A +F+ + C V +N MI GY +
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCR 147
G+ A L +ME + NV ++ MI C+
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 69.3 bits (168), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 45/189 (23%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK 71
V N +L Y++SG+ D+AR F+ M ERNVV+W +++ + RV + +F M E+
Sbjct: 272 VVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEE 331
Query: 72 NV-VSW--------------------------------------NAMVGGLVRNGGLEGA 92
+ SW N+++ + G +E +
Sbjct: 332 MIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYS 391
Query: 93 RMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRA 148
R VF+ + + SWN+M+ YA NG ++E LF+ M V IT+ +++SG
Sbjct: 392 RRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDT 451
Query: 149 GNVEAAYGL 157
G E YGL
Sbjct: 452 GLTE--YGL 458
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 27 LDEARWFFESMPERNVVS---WTAMLGGYADAGRVEDARRVFDVM----PEKNVVSWNAM 79
LD AR F+ + + ++++ W AM GY+ G DA V+ M E S +
Sbjct: 183 LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVA 242
Query: 80 VGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMIAGYAENGAMDEARALFDQMEFRNV 135
+ V L R + Q R V +NV++ Y E+G D+AR +FD M RNV
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 136 ITWTSMISGYCRAGNVEAAYGL 157
+TW S+IS + V + L
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNL 324
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 48/201 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV-VSW-------------TA 47
+FD M RN+VT N+++S + + E F M E + SW A
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA 352
Query: 48 MLGG-------------------------YADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
+L G Y G VE +RRVFDVM K++ SWN M+
Sbjct: 353 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412
Query: 83 LVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQM--EFR--- 133
NG +E +FE V +++ +++G ++ G + +LF++M EFR
Sbjct: 413 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472
Query: 134 NVITWTSMISGYCRAGNVEAA 154
+ + ++ RAG ++ A
Sbjct: 473 ALEHYACLVDILGRAGKIKEA 493
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER-NVVSWTAMLGGYADAGRVED 60
+ D M ++++V+C+ M+SG +G DEA F M + N ++ ++L + + +
Sbjct: 385 VLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRT 444
Query: 61 ARRVFDVMPEKNVVSWNAMVG-----GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYA 115
++ + +++ + VG + G +E AR F+Q + ++SW V+I+ YA
Sbjct: 445 SKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYA 504
Query: 116 ENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
NG D+A ALFD+M+ + N +T+ + +S G V+
Sbjct: 505 INGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVK 545
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ CN+++ Y + +D A F+ RN+VSW ++L G+ R ++A +F +M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQT-PCRTV-------------VSWNVMIAGYA 115
++ V V L+R FEQ PC+++ V+ + +I Y
Sbjct: 321 QEAVEVDEVTVVSLLR------VCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYT 374
Query: 116 ENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+D+A + D M +++V++ ++MISG AG + A
Sbjct: 375 SCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEA 413
Score = 63.2 bits (152), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 6/154 (3%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N V ++++ Y ++D+A +SM ++VVS + M+ G A AGR ++A +F M
Sbjct: 362 NEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR 421
Query: 70 EK-NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV-----MIAGYAENGAMDEA 123
+ N ++ +++ + L ++ R++ ++ ++ YA+ GA++ A
Sbjct: 422 DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMA 481
Query: 124 RALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
R FDQ+ +N+I+WT +IS Y G + A L
Sbjct: 482 RRTFDQITEKNIISWTVIISAYAINGLPDKALAL 515
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQS-----GMLDEARWFFESMPERNVVSWTAMLGGYA--- 53
LFD M R++++ + ++ Y+QS G+ E+ E + V+ T++L
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 54 --DAGRVEDA---RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWN 108
D GR RR FD+ +V N+++ + ++ A VF++T CR +VSWN
Sbjct: 241 DIDVGRSVHGFSIRRGFDL---ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 109 VMIAGYAENGAMDEARALFDQM 130
++AG+ N DEA +F M
Sbjct: 298 SILAGFVHNQRYDEALEMFHLM 319
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
LF+ M +++V NA L+ +Q+G A +F M V + +ML G
Sbjct: 166 LFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGS 225
Query: 58 VEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+E ++D ++ N++ NA + ++ G E AR++FE+ R VVSW+ MI G
Sbjct: 226 LEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVG 285
Query: 114 YAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNV 151
YA NG EA LF M+ N +T+ ++S AG V
Sbjct: 286 YAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK-------NV 73
Y++ G L A + FESM +++V+W A L G A F+ M V
Sbjct: 154 YMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTV 213
Query: 74 VSWNAMVGGLVRNGGLEGARMVF-----EQTPCRTVVSWNVMIAGYAENGAMDEARALFD 128
VS + G L G LE ++ E+ C +V N + + + G + AR LF+
Sbjct: 214 VSMLSACGQL---GSLEIGEEIYDRARKEEIDCNIIVE-NARLDMHLKCGNTEAARVLFE 269
Query: 129 QMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+M+ RNV++W++MI GY G+ A L
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTL 298
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
N+VT + ++ +++ G L EA + M R + +++T+++ G+ ++ A ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMIAGYAEN 117
D+M K N+ ++N ++ G + ++ +F + R VV ++N +I G+ E
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
G ++ A+ LF +M R N++T+ ++ G C G E A
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 88/171 (51%), Gaps = 20/171 (11%)
Query: 2 LFDVMPHRNI----VTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
L M RNI V + ++ G + G LD A F M + N++++ ++GG+
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 54 DAGRVEDARRVF-DVMPEK---NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----V 105
+AGR +D ++ D++ K NVV+++ ++ V+ G L A + ++ R + +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
++ +I G+ + +D+A + D M + N+ T+ +I+GYC+A ++
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
NI+T N ++ G+ +G D+ M +R NVV+++ ++ + G++ +A +
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 66 DVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
M + + +++ +++ G + L+ A + + + + ++N++I GY +
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 118 GAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAA 154
+D+ LF +M R V +T+ ++I G+C G + A
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 2 LFDVMPHRNIV----TCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
LF M R +V T N ++ G+ + G L+ A+ F+ M R N+V++ +L G
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Query: 54 DAGRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV---- 105
D G E A +F+ + E ++ +N ++ G+ ++ A +F P + V
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 106 SWNVMIAGYAENGAMDEARALFDQME 131
++N+MI G + G + EA LF +ME
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKME 570
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 16/156 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N +T + +++G G + EA + M E ++++ ++ G +G+ +A +
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 66 DVMPE----KNVVSWNAMVGGLVRNG----GLEGARMVFEQTPCRTVVSWNVMIAGYAEN 117
D M E N V++ ++ + ++G +E R + E+ V ++++I G ++
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAG 149
G++D A LF++ME + N+IT+ +I G+C AG
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 312
Score = 47.4 bits (111), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 16/146 (10%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFE----SMPERNVVSWTAMLGGYA 53
LF M R NIVT +L G +G ++A FE S E ++ + ++ G
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVV 105
+A +V+DA +F +P K V ++N M+GGL + G L A ++F E
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 106 SWNVMIAGYAENGAMDEARALFDQME 131
++N++I + +G ++ L ++++
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELK 605
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 55/211 (26%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPERN----VVSWTAMLGGYA 53
L+D M R +I T N++++G+ LD+A+ FE M ++ VV++ ++ G+
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----V 105
+ RVED +F M + + V++ ++ GL +G + A+ VF+Q V +
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFR-------------------------------- 133
++++++ G NG +++A +FD M+
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 134 -------NVITWTSMISGYCRAGNVEAAYGL 157
NV+T+ +MISG C ++ AY L
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 51/199 (25%)
Query: 10 NIVTCNAMLSGYLQSGM-----------------------------------LDEARWFF 34
N+VT NA++ +++ G LD+A+ F
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 35 ESMPER----NVVSWTAMLGGYADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRN 86
E M + +VV++ ++ G+ + RVED +F M + + V++ ++ GL +
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448
Query: 87 GGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQMEFR----NVITW 138
G + A+ VF+Q V +++++++ G NG +++A +FD M+ ++ +
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508
Query: 139 TSMISGYCRAGNVEAAYGL 157
T+MI G C+AG V+ + L
Sbjct: 509 TTMIEGMCKAGKVDDGWDL 527
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 2 LFDVMPHRNIV----TCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
LF M HR +V T ++ G G D A+ F+ M ++++++ +L G
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVV 105
+ G++E A VFD M + ++ + M+ G+ + G ++ +F + VV
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 106 SWNVMIAGYAENGAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAA 154
++N MI+G + EA AL +M+ N T+ ++I + R G+ A+
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS 594
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT +++L+GY + +A + M E + +++T ++ G + +A +
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMIAGYAEN 117
D M ++ N+V++ +V GL + G + A + + VV +N +I +
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 273
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAG 149
+D+A LF +ME + NV+T++S+IS C G
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 309
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 20/174 (11%)
Query: 2 LFDVMPHRNI----VTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
FD M +N+ V N ++ Y +SG L A E M + N ++T+++ G +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 54 DAGRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----V 105
RVE+A+ +F+ M E NV + A++ G + G + + + + V +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAY 155
++ VMI GYA +G + EA L ++M + + IT+ I GY + G V A+
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 60.1 bits (144), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+VT N ++ G G DEA F E M ER +++++ ++ G A R+ DA V
Sbjct: 294 NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL 353
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGA----RMVFEQTPCRTVVSWNVMIAGYAEN 117
M +K NV+ +N ++ + G L A ++ + T ++N +I GY +N
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKN 413
Query: 118 GAMDEARALFDQM 130
G D A L +M
Sbjct: 414 GQADNAERLLKEM 426
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 57/210 (27%)
Query: 1 MLFDVMPHRNI----VTCNAMLSGYLQSGMLDEARWFFESMPERN-----VVSWTAMLGG 51
M D M R + T + ++ G ++EA F++ +RN V +++ M+ G
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC-KRNGMLPDVYTYSVMIDG 619
Query: 52 YADAGRVEDARRVFDVMPEKNV----VSWNAMVGGLVRNGGL------------------ 89
A R E+ + FD M KNV V +N ++ R+G L
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 90 -----------------EGARMVFEQTPCR----TVVSWNVMIAGYAENGAMDEARALFD 128
E A+++FE+ V + +I GY + G M + L
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 129 QMEFRNV----ITWTSMISGYCRAGNVEAA 154
+M +NV IT+T MI GY R GNV A
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
N+ A++ GY + G + + M +NV +++T M+GGYA G V +A R+
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 66 DVMPEKNVV----SWNAMVGGLVRNGG-LEGARMVFEQTPCRTVVSWNVMI 111
+ M EK +V ++ + G ++ GG LE + E+ + WN +I
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWNKLI 824
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDVM 68
T NA+L G ++G LDEA + + R + VS+ ++ G ++++A D M
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 69 PEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCR------TVVSWNVMIAGYAENG 118
++ + +++ ++ GL +E A ++ C+ V +++VMI G +
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD--CKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 119 AMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
+E + FD+M +NV + + +I YCR+G + A L
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPE---RNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
TCN +L+ +++ + F+ + + +V +T + + G+VE+A ++F M
Sbjct: 228 TCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 70 EK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAMD 121
E NVV++N ++ GL G + A M E+ R T++++++++ G +
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 122 EARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+A + +M + NVI + ++I + AG++ A
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 20/174 (11%)
Query: 2 LFDVMPHRNI----VTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
FD M +N+ V N ++ Y +SG L A E M + N ++T+++ G +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 54 DAGRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----V 105
RVE+A+ +F+ M E NV + A++ G + G + + + + V +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAY 155
++ VMI GYA +G + EA L ++M + + IT+ I GY + G V A+
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 60.1 bits (144), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+VT N ++ G G DEA F E M ER +++++ ++ G A R+ DA V
Sbjct: 294 NVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL 353
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGA----RMVFEQTPCRTVVSWNVMIAGYAEN 117
M +K NV+ +N ++ + G L A ++ + T ++N +I GY +N
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKN 413
Query: 118 GAMDEARALFDQM 130
G D A L +M
Sbjct: 414 GQADNAERLLKEM 426
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 57/210 (27%)
Query: 1 MLFDVMPHRNI----VTCNAMLSGYLQSGMLDEARWFFESMPERN-----VVSWTAMLGG 51
M D M R + T + ++ G ++EA F++ +RN V +++ M+ G
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC-KRNGMLPDVYTYSVMIDG 619
Query: 52 YADAGRVEDARRVFDVMPEKNV----VSWNAMVGGLVRNGGL------------------ 89
A R E+ + FD M KNV V +N ++ R+G L
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 90 -----------------EGARMVFEQTPCR----TVVSWNVMIAGYAENGAMDEARALFD 128
E A+++FE+ V + +I GY + G M + L
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 129 QMEFRNV----ITWTSMISGYCRAGNVEAA 154
+M +NV IT+T MI GY R GNV A
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
N+ A++ GY + G + + M +NV +++T M+GGYA G V +A R+
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 66 DVMPEKNVV----SWNAMVGGLVRNGG-LEGARMVFEQTPCRTVVSWNVMI 111
+ M EK +V ++ + G ++ GG LE + E+ + WN +I
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWNKLI 824
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDVM 68
T NA+L G ++G LDEA + + R + VS+ ++ G ++++A D M
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 69 PEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCR------TVVSWNVMIAGYAENG 118
++ + +++ ++ GL +E A ++ C+ V +++VMI G +
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD--CKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 119 AMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
+E + FD+M +NV + + +I YCR+G + A L
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPE---RNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
TCN +L+ +++ + F+ + + +V +T + + G+VE+A ++F M
Sbjct: 228 TCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME 287
Query: 70 EK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAMD 121
E NVV++N ++ GL G + A M E+ R T++++++++ G +
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 122 EARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+A + +M + NVI + ++I + AG++ A
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
R++ ++ YL+ G +D AR F+++PE++ V+WT M+ G GR + ++F +
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 69 PEKNVVSWNAMVGGLVRNGG----LEGARMVFEQTPCRTVVS-----WNVMIAGYAENGA 119
E NVV ++ ++ LEG + + R + NV+I Y + G
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHI-LRYGLEMDASLMNVLIDSYVKCGR 299
Query: 120 MDEARALFDQMEFRNVITWTSMISGY 145
+ A LF+ M +N+I+WT+++SGY
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGY 325
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 19/150 (12%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF--------D 66
N +++ Y ++G + AR FE MPERN+VSW+ M+ G E++ VF D
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 67 VMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC-------RTVVSWNVMIAGYAENGA 119
E + S+ GL +G G MVF+ R V ++I Y ++G
Sbjct: 143 SPNEYILSSFIQACSGL--DG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGN 198
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAG 149
+D AR +FD + ++ +TWT+MISG + G
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N NA+L Y + G ++A F+S R+VV W +++ YA+ G + A ++ + M
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM 648
Query: 70 ----EKNVVSWNAMV-----GGLVRNGGLEGARMV-FEQTPCRTVVSWNVMIAGYAENGA 119
E N +++ ++ GLV +G + M+ F P + M++ G
Sbjct: 649 SEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEP--ETEHYVCMVSLLGRAGR 706
Query: 120 MDEARALFDQMEFR-NVITWTSMISGYCRAGNVEAA 154
+++AR L ++M + I W S++SG +AGNVE A
Sbjct: 707 LNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 91/237 (38%), Gaps = 81/237 (34%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE---------------------- 39
LF+ MP++NI++ +LSGY Q+ + EA F SM +
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Query: 40 ----RNVVSWT-------------AMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
V ++T +++ YA + DAR+VFD+ +VV +NAM+ G
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 83 LVRNGG---LEGARMVFEQTPCR-------TVVSW------------------------- 107
R G L A +F R T VS
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485
Query: 108 -------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ +I Y+ + ++R +FD+M+ ++++ W SM +GY + E A L
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNL 542
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N ++ Y++ G + A F MP +N++SWT +L GY ++A +F M + +
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS--------WNVMIAGYAENGAMDEARAL 126
++ + A Q T+ + N +I YA+ + +AR +
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 127 FDQMEFRNVITWTSMISGYCRAG 149
FD +V+ + +MI GY R G
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLG 430
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 8/138 (5%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADA----- 55
++FD +P ++ VT M+SG ++ G + F + E NVV +L A
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 56 ---GRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
G + + E + N ++ V+ G + A +F P + ++SW +++
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLS 323
Query: 113 GYAENGAMDEARALFDQM 130
GY +N EA LF M
Sbjct: 324 GYKQNALHKEAMELFTSM 341
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEA-RWFFESMPER---NVVSWTAMLGGYADAG 56
++FD M +++V N+M +GY+Q +EA F E R + ++ M+ +
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 57 RVEDAR----RVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
V+ + ++ E N NA++ + G E A F+ R VV WN +I+
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 113 GYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
YA +G +A + ++M N IT+ ++S AG VE
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVE 673
Score = 49.7 bits (117), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 12/164 (7%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVED 60
++F + +I +A++ Y L ++R F+ M +++V W +M GY E+
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEE 538
Query: 61 ARRVF----------DVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVM 110
A +F D N+V+ + V+ G +++ C ++ N +
Sbjct: 539 ALNLFLELQLSRERPDEFTFANMVTAAGNLAS-VQLGQEFHCQLLKRGLECNPYIT-NAL 596
Query: 111 IAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ YA+ G+ ++A FD R+V+ W S+IS Y G + A
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKA 640
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 21/157 (13%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGM---LDEARWFFESMPER----NVVSWTAMLGGYAD 54
+FD+ ++V NAM+ GY + G L EA F M R +++++ ++L A
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 55 AGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVM 110
+ ++++ +M + ++ + +A++ L+ +R+VF++ + +V WN M
Sbjct: 467 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 526
Query: 111 IAGYAENGAMDEARALF----------DQMEFRNVIT 137
AGY + +EA LF D+ F N++T
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 39/187 (20%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGY-------- 52
M+FD MP R++V+ N M++GY +S + +A FF MP R+VVSW +ML GY
Sbjct: 104 MVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLK 163
Query: 53 -----ADAGR--VEDARRVFDVM------------------------PEKNVVSWNAMVG 81
D GR +E R F ++ + +VV+ +A++
Sbjct: 164 SIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLD 223
Query: 82 GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSM 141
+ + VF+ P + VSW+ +IAG +N + A F +M+ N S+
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 142 ISGYCRA 148
+ R+
Sbjct: 284 YASVLRS 290
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 91 GARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
A MVF++ P R VVSWN MI GY+++ M +A + F+ M R+V++W SM+SGY + G
Sbjct: 101 SASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNG 159
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 48 MLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW 107
+L Y ++ A VFD MP ++VVSWN M+ G ++ + A F P R VVSW
Sbjct: 89 LLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSW 148
Query: 108 NVMIAGYAENGAMDEARALFDQM 130
N M++GY +NG ++ +F M
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDM 171
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRVEDARRVFDV 67
V+ N+++SGY+ ++A+ F M E + ++ +L A+ +++
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ 628
Query: 68 MPEKNVVSWNAMVGGLV----RNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEA 123
+ +K + S + LV + G L +R++FE++ R V+WN MI GYA +G +EA
Sbjct: 629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 124 RALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
LF++M N+ +T+ S++ G ++
Sbjct: 689 IQLFERMILENIKPNHVTFISILRACAHMGLID 721
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 23/162 (14%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ C+ ++ Y + G L ++R FE R+ V+W AM+ GYA G+ E+A ++F+ M
Sbjct: 637 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 70 EKNVVSWNAMVGGLVR--------NGGLEGARMVFE------QTPCRTVVSWNVMIAGYA 115
+N+ + ++R + GLE M+ Q P ++ M+
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLP-----HYSNMVDILG 751
Query: 116 ENGAMDEARALFDQMEFR-NVITWTSMISGYC--RAGNVEAA 154
++G + A L +M F + + W +++ G C NVE A
Sbjct: 752 KSGKVKRALELIREMPFEADDVIWRTLL-GVCTIHRNNVEVA 792
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++V +A+L Y + E+ F+ +PE+N VSW+A++ G + A + F M
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 70 EKNVVSWNAMVGGLVRN---------GGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
+ N ++ ++R+ GG A + +V + YA+ M
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVR-TATLDMYAKCDNM 332
Query: 121 DEARALFDQMEFRNVITWTSMISGYCR 147
+A+ LFD E N ++ +MI+GY +
Sbjct: 333 QDAQILFDNSENLNRQSYNAMITGYSQ 359
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 24 SGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM------PEKNVVSWN 77
SG ++E + VSW +++ GY + EDA+ +F M P+K +
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 78 AMVGGLVRNGGL--EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV 135
+ + GL + V ++ V + ++ Y++ G + ++R +F++ R+
Sbjct: 610 LDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 669
Query: 136 ITWTSMISGYCRAGNVEAAYGL 157
+TW +MI GY G E A L
Sbjct: 670 VTWNAMICGYAHHGKGEEAIQL 691
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
N VT ++ ++ + A + M R + V +T ++ G AG + +A + F
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352
Query: 66 DVMPEKN----VVSWNAMVGGLVRNGGLEGARMV----FEQTPCRTVVSWNVMIAGYAEN 117
++ E N VV++ A+V GL + G L A + E++ VV+++ MI GY +
Sbjct: 353 KMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKK 412
Query: 118 GAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAAYGL 157
G ++EA +L +ME +NV+ T+ ++I G +AG E A L
Sbjct: 413 GMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Score = 60.1 bits (144), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 16/154 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+ VT N+++ GY + +A + M E NV ++ ++ G +DAG +++ +
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 66 DVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMIAGYAEN 117
M + + ++NA++ G + G ++G+ ++ + +V ++NV+I+ +A
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCR 147
G M +AR L +M R N T+ +MISG C+
Sbjct: 832 GKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 13/166 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEA-RWFFESMPERNVVSWTAMLGGYADAGRVED 60
L D + N++T +LS Y ++EA R S + +VV++++++ G+V +
Sbjct: 218 LVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLE 277
Query: 61 ARRVFDVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIA 112
+ M E +V V++ +V L + A ++ Q R + V + V++
Sbjct: 278 GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMD 337
Query: 113 GYAENGAMDEARALFDQM----EFRNVITWTSMISGYCRAGNVEAA 154
G + G + EA F + + NV+T+T+++ G C+AG++ +A
Sbjct: 338 GLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Score = 46.2 bits (108), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Query: 5 VMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGR--- 57
V+P N+VT ++M++GY++ GML+EA M ++NVV ++ ++ G AG+
Sbjct: 395 VIP--NVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Query: 58 -VEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIA 112
+E ++ + + E+N +A+V L R G ++ + + + + V +++ +I
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512
Query: 113 GYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYG 156
+ + G + A A ++M+ R +V+++ +ISG + G V A +
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA 560
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 36/157 (22%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFE-----SMPERNVVSWTAMLGGYADAGRVEDARRV 64
+IVT N ++ G+ +S L++A F+ S+ +VV++T+M+ GY AG++ +A +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 65 FDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEAR 124
D M + N V++NV++ GYA+ G M A
Sbjct: 300 LDDMLRLGIYPTN---------------------------VTFNVLVDGYAKAGEMLTAE 332
Query: 125 ALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
+ +M F +V+T+TS+I GYCR G V + L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL 369
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRV- 64
++VT +M+SGY ++G + EA + M + V++ ++ GYA AG + A +
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 65 -----FDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYA 115
F P+ VV++ +++ G R G + ++E+ R +++++I
Sbjct: 336 GKMISFGCFPD--VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 116 ENGAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAA 154
+ +AR L Q+ +++I + +I G+C+AG V A
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 20/158 (12%)
Query: 12 VTCNAMLSGYLQSGMLDEARWF------FESMPERNVVSWTAMLGGYADAGRVEDARRVF 65
VT N ++ GY ++G + A F P+ VV++T+++ GY G+V R++
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD--VVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS----WNVMIAGYAEN 117
+ M + N +++ ++ L L AR + Q + ++ +N +I G+ +
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKA 430
Query: 118 GAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNV 151
G ++EA + ++ME + IT+T +I G+C G +
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESM-------PERNVVSWTAMLGGYADAGRVEDARRV 64
V+ N L G+L S ++ + F + E + ++L RVEDA ++
Sbjct: 134 VSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKL 193
Query: 65 FD----VMPEKNVVSWNAMVGGLVRNGGLEGARM---VFEQTPCR-TVVSWNVMIAGYAE 116
FD + ++N ++ GL G E A V C +V++N +I G+ +
Sbjct: 194 FDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK 253
Query: 117 NGAMDEARALFDQMEF-----RNVITWTSMISGYCRAGNVEAAYGL 157
+ +++A +F ++ +V+T+TSMISGYC+AG + A L
Sbjct: 254 SNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 36/157 (22%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFE-----SMPERNVVSWTAMLGGYADAGRVEDARRV 64
+IVT N ++ G+ +S L++A F+ S+ +VV++T+M+ GY AG++ +A +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 65 FDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEAR 124
D M + N V++NV++ GYA+ G M A
Sbjct: 300 LDDMLRLGIYPTN---------------------------VTFNVLVDGYAKAGEMLTAE 332
Query: 125 ALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
+ +M F +V+T+TS+I GYCR G V + L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL 369
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRV- 64
++VT +M+SGY ++G + EA + M + V++ ++ GYA AG + A +
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 65 -----FDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYA 115
F P+ VV++ +++ G R G + ++E+ R +++++I
Sbjct: 336 GKMISFGCFPD--VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALC 393
Query: 116 ENGAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAA 154
+ +AR L Q+ +++I + +I G+C+AG V A
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 20/158 (12%)
Query: 12 VTCNAMLSGYLQSGMLDEARWF------FESMPERNVVSWTAMLGGYADAGRVEDARRVF 65
VT N ++ GY ++G + A F P+ VV++T+++ GY G+V R++
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD--VVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS----WNVMIAGYAEN 117
+ M + N +++ ++ L L AR + Q + ++ +N +I G+ +
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKA 430
Query: 118 GAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNV 151
G ++EA + ++ME + IT+T +I G+C G +
Sbjct: 431 GKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRM 468
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESM-------PERNVVSWTAMLGGYADAGRVEDARRV 64
V+ N L G+L S ++ + F + E + ++L RVEDA ++
Sbjct: 134 VSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKL 193
Query: 65 FD----VMPEKNVVSWNAMVGGLVRNGGLEGARM---VFEQTPCR-TVVSWNVMIAGYAE 116
FD + ++N ++ GL G E A V C +V++N +I G+ +
Sbjct: 194 FDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK 253
Query: 117 NGAMDEARALFDQMEF-----RNVITWTSMISGYCRAGNVEAAYGL 157
+ +++A +F ++ +V+T+TSMISGYC+AG + A L
Sbjct: 254 SNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 82/156 (52%), Gaps = 16/156 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
NI T +++++G+ L EA+ E M + NVV++ ++ G+ A RV+ +F
Sbjct: 357 NIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPC----RTVVSWNVMIAGYAEN 117
M ++ N V++ ++ G + + A+MVF+Q ++++N+++ G +N
Sbjct: 417 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAG 149
G + +A +F+ ++ ++ T+ MI G C+AG
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 65.9 bits (159), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 87/161 (54%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+VT +A++ +++ G L +A +E M +R N+ ++++++ G+ R+ +A+++
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 66 DVMPEK----NVVSWNAMVGGLVR----NGGLEGARMVFEQTPCRTVVSWNVMIAGYAEN 117
++M K NVV++N ++ G + + G+E R + ++ V++ +I G+ +
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 118 GAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAA 154
D A+ +F QM N++T+ ++ G C+ G + A
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 69/127 (54%), Gaps = 14/127 (11%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVE 59
D +P N+VT N +++G+ ++ +D+ F M +R N V++T ++ G+ A +
Sbjct: 388 DCLP--NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 60 DARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMI 111
+A+ VF M N++++N ++ GL +NG L A +VFE T + ++N+MI
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 505
Query: 112 AGYAENG 118
G + G
Sbjct: 506 EGMCKAG 512
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+V + ++ + D+A F M + NV+++++++ + GR DA R+
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
M E+ N+V+++A++ V+ G L A ++E+ R++ +++ +I G+
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+ EA+ + + M + NV+T+ ++I+G+C+A V+ L
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT N++L+G+ + +A + M E + V++T ++ G + +A +
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPC----RTVVSWNVMIAGYAEN 117
D M ++ ++V++ A+V GL + G + A + + VV ++ +I +
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAG 149
D+A LF +ME + NVIT++S+IS C G
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYG 302
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 2 LFDVMPHR----NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYA 53
+FD+M + ++VT N +++G+ +S +++ F M + +V ++ ++ GY
Sbjct: 311 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 370
Query: 54 DAGRVEDARRVFDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VV 105
AG++ A++VF+ M + ++V++N ++ L NG +E A ++ E ++
Sbjct: 371 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAG 149
++N++I G + EA LF + + V I + +MISG CR G
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Score = 67.4 bits (163), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 89/164 (54%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+ T N++++G+ G L +A++ F+ M + +VV++ ++ G+ + RVED ++F
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 66 DVMPEKNVV----SWNAMVGGLVRNGGLEGARMVFEQ-TPCRT---VVSWNVMIAGYAEN 117
M + +V ++N ++ G + G L A+ VF + C +V++N+++ N
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G +++A + + ++ ++IT+ +I G CR ++ A+ L
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Score = 66.2 bits (160), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 87/161 (54%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N++ A++ +++ G L EAR ++ M R NV ++ +++ G+ G + DA+ +F
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMIAGYAEN 117
D+M K +VV++N ++ G ++ +E +F + + +V ++N +I GY +
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 118 GAMDEARALFDQM----EFRNVITWTSMISGYCRAGNVEAA 154
G ++ A+ +F++M +++T+ ++ C G +E A
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 51/194 (26%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP------------------------------- 38
+IVT ++L+G+ Q EA +SM
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 39 --------ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRN 86
+ V++ ++ G +++GR DA R+ M ++ NV+ + A++ V+
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 87 GGLEGARMVFEQTPCRTVV----SWNVMIAGYAENGAMDEARALFDQME----FRNVITW 138
G L AR ++++ R+VV ++N +I G+ +G + +A+ +FD M F +V+T+
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 139 TSMISGYCRAGNVE 152
++I+G+C++ VE
Sbjct: 328 NTLITGFCKSKRVE 341
Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Query: 41 NVVSWTAMLGGYADAGRVEDARRVFDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVF 96
++V+ ++L G+ R ++A + D M NVV +N ++ GL +N L A VF
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 97 ---EQTPCRT-VVSWNVMIAGYAENGA-MDEARALFDQMEFR---NVITWTSMISGYCRA 148
E+ R V++N +I+G + +G D AR L D ++ + NVI +T++I + +
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 149 GNVEAAYGL 157
GN+ A L
Sbjct: 268 GNLLEARNL 276
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 86/161 (53%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVF 65
+I+ C+ MLSG ++G +DEA F M ++V+++ ++ G G+ + A ++
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 66 DVMPEKNVV----SWNAMVGGLVRNGGLEGARMVFEQT----PCRTVVSWNVMIAGYAEN 117
D M +K ++ + A++ GL + G L AR + + +V +N++I GYA++
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 118 GAMDEARALF----DQMEFRNVITWTSMISGYCRAGNVEAA 154
G ++EA LF + +V T+ S+I GYC+ N+ A
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRVEDARRVF 65
++V + ++ G + G D A W ++ M ++ ++ + A+L G G + +AR +
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL 456
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGA----RMVFEQTPCRTVVSWNVMIAGYAEN 117
D + ++V +N ++ G ++G +E A ++V E +V ++N +I GY +
Sbjct: 457 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 516
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEA 153
+ EAR + D ++ +V+++T+++ Y GN ++
Sbjct: 517 QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRVE 59
D+ P ++V+ N+++SGY + G +D A+ FF ++ + +V S ++ G G +
Sbjct: 217 DIGP--SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIA 274
Query: 60 DARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGA----RMVFEQTPCRTVVSWNVMI 111
+A + M E + V++N + G G + GA R + ++ V+++ +++
Sbjct: 275 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Query: 112 AGYAENGAMDEARALFDQM-----EFRNVITWTSMISGYCRAGNVEAAYGL 157
G + G +D L M E ++I + M+SG C+ G ++ A L
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 86/161 (53%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVF 65
+I+ C+ MLSG ++G +DEA F M ++V+++ ++ G G+ + A ++
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 66 DVMPEKNVV----SWNAMVGGLVRNGGLEGARMVFEQT----PCRTVVSWNVMIAGYAEN 117
D M +K ++ + A++ GL + G L AR + + +V +N++I GYA++
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 118 GAMDEARALF----DQMEFRNVITWTSMISGYCRAGNVEAA 154
G ++EA LF + +V T+ S+I GYC+ N+ A
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRVEDARRVF 65
++V + ++ G + G D A W ++ M ++ ++ + A+L G G + +AR +
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL 456
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGA----RMVFEQTPCRTVVSWNVMIAGYAEN 117
D + ++V +N ++ G ++G +E A ++V E +V ++N +I GY +
Sbjct: 457 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 516
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEA 153
+ EAR + D ++ +V+++T+++ Y GN ++
Sbjct: 517 QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 556
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRVE 59
D+ P ++V+ N+++SGY + G +D A+ FF ++ + +V S ++ G G +
Sbjct: 217 DIGP--SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIA 274
Query: 60 DARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGA----RMVFEQTPCRTVVSWNVMI 111
+A + M E + V++N + G G + GA R + ++ V+++ +++
Sbjct: 275 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Query: 112 AGYAENGAMDEARALFDQM-----EFRNVITWTSMISGYCRAGNVEAAYGL 157
G + G +D L M E ++I + M+SG C+ G ++ A L
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 39/166 (23%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
R + ++L+ YL+ G + A+ F+ MPER+ V W A++ GY+ G DA ++F VM
Sbjct: 83 RFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVM 142
Query: 69 PEK-------------------NVVSWNAMVGGLVRNGGLE------------------- 90
++ VS V G+ GLE
Sbjct: 143 LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAEL 202
Query: 91 -GARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV 135
A ++F + ++ VSWN MI Y+++G +EA +F M +NV
Sbjct: 203 GSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
NA++S Y + L A F M +++ VSW M+G Y+ +G E+A VF M EKNV
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV--------MIAGYAENGAMDEARAL 126
+ L+ A + E C V V ++ Y+ G + A L
Sbjct: 250 ISPVTIINLL------SAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ + +++ TS++S Y G+++ A
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIA 331
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 51/194 (26%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
LF MP RN ++ N M+ G+ Q + A FE M V+WT++L ++ G+
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGK 274
Query: 58 VEDARRVFDVMP-EKNVVSWNAM------------------VGGLVRNGGLE-------- 90
ED + F +M N VS A+ V G V GG E
Sbjct: 275 FEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNA 334
Query: 91 ------------GARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME------- 131
A +F Q + + SWN +I + + G +DEA +LF ++E
Sbjct: 335 LIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCN 394
Query: 132 -FRNVITWTSMISG 144
NV+TWTS+I G
Sbjct: 395 VKANVVTWTSVIKG 408
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 16/172 (9%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN--------VVSWTAMLGGYA 53
LF + ++ I + N++++ ++ +G LDEA F + E N VV+WT+++ G
Sbjct: 351 LFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCN 410
Query: 54 DAGRVEDARRVFDVMPEKNVVSWNAMVGGLVR--------NGGLEGARMVFEQTPCRTVV 105
GR +D+ F M V++ + + ++ N G E V + ++
Sbjct: 411 VQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENIL 470
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
N ++ YA+ G + E +F+ + +++I+W S+I GY G E A +
Sbjct: 471 VQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSM 522
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 67.8 bits (164), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT +++ GY +D+ F ++ +R N V+++ ++ G+ +G+++ A +F
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMIAGYAEN 117
M +V+++ ++ GL NG LE A +FE +V + +I G +
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
G +++A LF + + NV+T+T MISG C+ G++ A
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Score = 62.8 bits (151), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 90/167 (53%), Gaps = 18/167 (10%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVE 59
+++P N++T N +L +++ G L EA ++ M R N++++ ++ GY R+
Sbjct: 293 EIVP--NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 60 DARRVFDVMPEK----NVVSWNAMVGG--LVR--NGGLEGARMVFEQTPCRTVVSWNVMI 111
+A + D+M ++V++ +++ G +V+ + G++ R + ++ V++++++
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 112 AGYAENGAMDEARALFDQM----EFRNVITWTSMISGYCRAGNVEAA 154
G+ ++G + A LF +M +V+T+ ++ G C G +E A
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 81/161 (50%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERN----VVSWTAMLGGYADAGRVEDARRVF 65
++VT N++++G +SG A M ERN V +++ ++ G ++ A +F
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
M K +VV++N++V GL + G ++ + R V+++NV++ + +
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
G + EA L+ +M R N+IT+ +++ GYC + A
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 5 VMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN----VVSWTAMLGGYADAGRVED 60
V+P +++T +L G +G L++A FE + + +V +T ++ G G+VED
Sbjct: 434 VLP--DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 61 ARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIA 112
A +F +P K NV+++ M+ GL + G L A ++ E ++N +I
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 113 GYAENGAMDEARALFDQME 131
+ +G + + L ++M+
Sbjct: 552 AHLRDGDLTASAKLIEEMK 570
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 45/182 (24%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF---DVMPEKN 72
A+L Y + + AR F+ +P+RN V W AM+ Y G+V++A ++ DVMP N
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMP--N 145
Query: 73 VVSWNAMVGGLV--RNG---GLEGARMVFE-------------QTPCRTVVSWNV----- 109
S+NA++ GLV +G +E R + E + C + ++ +
Sbjct: 146 ESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIH 205
Query: 110 -----------------MIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVE 152
++ Y G++ + +FD ME R+V+ W+S+IS Y G+ E
Sbjct: 206 SYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAE 265
Query: 153 AA 154
+A
Sbjct: 266 SA 267
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 67.4 bits (163), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
RN A++ Y + + +AR FE + + N V WT + GY AG E+A VF+ M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 69 PEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEAR 124
++ + +++ ++ +R G L+ AR++F + VV+WNVMI+G+ + G A
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 125 ALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
F M +V + S + G+V +A G+
Sbjct: 313 EYFFNMRKSSVKSTRSTL------GSVLSAIGI 339
Score = 67.0 bits (162), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ 98
ERN A++ YA R+ DARRVF+ + + N V W + G V+ G E A +VFE+
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 99 TPCR----TVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
+++ +I Y G + +AR LF +M +V+ W MISG+ + G
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
NI ++++S Y + ++ A FE++ E+N V W AM+ GYA G +F M
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 70 EKNV----VSWNAMVGGLVRNGGLE-GAR---MVFEQTPCRTVVSWNVMIAGYAENGAMD 121
++ +++ + LE G++ ++ ++ + + N ++ YA+ GA++
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 480
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+AR +F++M R+ +TW ++I Y + N A+ L
Sbjct: 481 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Score = 60.1 bits (144), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARR----- 63
++IV M+SG+ Q+G +EA F++ M V+ A V + R
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754
Query: 64 ---VFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT-VVSWNVMIAGYAENGA 119
+F + + + ++ N ++ + G ++G+ VF++ R+ VVSWN +I GYA+NG
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 120 MDEARALFDQMEFRNV----ITWTSMISGYCRAGNV 151
++A +FD M ++ IT+ +++ AG V
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 16 AMLSGYLQS-GMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
++L Y+ S GM + F E +++V WT M+ G++ G E+A + + M V+
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL 729
Query: 75 SWNAMVGGLVR--------NGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARAL 126
A ++R G ++F ++ N +I YA+ G M + +
Sbjct: 730 PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQV 789
Query: 127 FDQMEFR-NVITWTSMISGYCRAGNVEAA 154
FD+M R NV++W S+I+GY + G E A
Sbjct: 790 FDEMRRRSNVVSWNSLINGYAKNGYAEDA 818
Score = 56.2 bits (134), Expect = 9e-09, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 84/191 (43%), Gaps = 43/191 (22%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGR 57
+F+ + N V + SGY+++G+ +EA FE M + + +++ ++ Y G+
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
Query: 58 VEDARRVFDVMPEKNVVSWNAMVGGL---------------VRNGGLEGAR--------- 93
++DAR +F M +VV+WN M+ G +R ++ R
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 94 ----------MVFEQTPCRTVVSWNV-----MIAGYAENGAMDEARALFDQMEFRNVITW 138
+V + ++ N+ +++ Y++ M+ A +F+ +E +N + W
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 139 TSMISGYCRAG 149
+MI GY G
Sbjct: 397 NAMIRGYAHNG 407
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
R++ T ++++ Y + G++ +AR F S+PE +VVS A++ GY+ +E+A +F M
Sbjct: 562 RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEM 620
Query: 69 PEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWN-----VMIAGYAENGA 119
+ V +++ +V + L Q R S ++ Y +
Sbjct: 621 LTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRG 680
Query: 120 MDEARALFDQMEF-RNVITWTSMISGYCRAGNVEAA 154
M EA ALF ++ ++++ WT M+SG+ + G E A
Sbjct: 681 MTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER-NVVSWTAMLGGYADAGRVE 59
++F + + +T N ++ Y + G + + F+ M R NVVSW +++ GYA G E
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Query: 60 DARRVFDVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV-----M 110
DA ++FD M + ++ +++ ++ G + R +FE + + V M
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACM 876
Query: 111 IAGYAENGAMDEARALFDQMEFR-NVITWTSMISGYCR 147
+ G + EA + + + W+S++ G CR
Sbjct: 877 VDLLGRWGYLQEADDFIEAQNLKPDARLWSSLL-GACR 913
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 67.4 bits (163), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++VT N+++SG SG +A M +R +V ++ A++ GRV +A +
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
+ M + ++V+++ ++ GL L+ A +F + VV+++++I GY ++
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 118 GAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAA 154
++ LF +M RN +T+T +I GYCRAG + A
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT + ++ G LDEA F M + +VV+++ ++ GY + +VE ++F
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLF 349
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTP-C---RTVVSWNVMIAGYAEN 117
M ++ N V++ ++ G R G L A +F + C ++++NV++ G +N
Sbjct: 350 CEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G +++A + M+ +++T+ +I G C+AG V A+ +
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 81/156 (51%), Gaps = 16/156 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++VT + +++GY +S ++ F M +R N V++T ++ GY AG++ A +F
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 66 DVM----PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
M N++++N ++ GL NG +E A ++ +V++N++I G +
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 118 GAMDEARALFDQMEFRNVI----TWTSMISGYCRAG 149
G + +A ++ + + ++ T+T+M+ G + G
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 51/194 (26%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM------PE------------------------ 39
+IVT ++L+G+ + + +A + F+ M P
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLL 209
Query: 40 ---------RNVVSWTAMLGGYADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRN 86
+VV++ +++ G +GR DA R+ M ++ +V ++NA++ V+
Sbjct: 210 NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Query: 87 GGLEGARMVFEQTPCRT----VVSWNVMIAGYAENGAMDEARALFDQME----FRNVITW 138
G + A +E+ R+ +V+++++I G +DEA +F M F +V+T+
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 139 TSMISGYCRAGNVE 152
+ +I+GYC++ VE
Sbjct: 330 SILINGYCKSKKVE 343
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 67.4 bits (163), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
N++++G+ + G + A F M E VV++T+++GGY G++ A R++ M
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 71 K----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDE 122
K ++ ++ ++ GL R G + A +F + V V++NVMI GY E G M +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 123 ARALFDQMEFRNVI----TWTSMISGYCRAGNVEAA 154
A +M + ++ ++ +I G C G A
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFD 66
+VT +++ GY G +++A + M + ++ ++T +L G AG + DA ++F+
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 67 VMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV----SWNVMIAGYAENG 118
M E NV V++N M+ G G + A ++ + +V S+ +I G G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 119 AMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAA 154
EA+ D + N I +T ++ G+CR G +E A
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Score = 56.6 bits (135), Expect = 7e-09, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRV 58
++V P+R VT N M+ GY + G + +A F + M E+ +V S+ ++ G G+
Sbjct: 536 WNVKPNR--VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 59 EDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVM 110
+A+ D + E N + + ++ G R G LE A V ++ R V V + V+
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVL 653
Query: 111 IAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
I G ++ L +M R + + +TSMI + G+ + A+G+
Sbjct: 654 IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Score = 47.0 bits (110), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 18/171 (10%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRV 58
F V P N+ NA++ + EA F+ M + N V+++ ++ + G++
Sbjct: 361 FGVSP--NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 59 EDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVM 110
+ A M + +V +N+++ G + G + A + + TVV++ +
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 111 IAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+ GY G +++A L+ +M + ++ T+T+++SG RAG + A L
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 67.4 bits (163), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 41/170 (24%)
Query: 2 LFDVMPHRNIVTCNAMLSGY--LQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVE 59
+FD MP R + + + + +D R FE MP ++VVS+ ++ GYA +G E
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 60 DARRVF------DVMPEK--------------NVVSWNAMVGGLVRNG------------ 87
DA R+ D+ P+ +V+ + G ++R G
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLV 284
Query: 88 -------GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
+E + VF + CR +SWN ++AGY +NG +EA LF QM
Sbjct: 285 DMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM 334
Score = 66.2 bits (160), Expect = 8e-12, Method: Composition-based stats.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 78/234 (33%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----------------------- 38
+F+VMP +++V+ N +++GY QSGM ++A M
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 39 ----------------ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
+ +V ++++ YA + R+ED+ RVF + ++ +SWN++V G
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 83 LVRNGGLEGARMVFEQT-----------------PCRTVVSW-----------------N 108
V+NG A +F Q C + + N
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 109 VMIAG-----YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ IA Y++ G + AR +FD+M + ++WT++I G+ G+ A L
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 43/185 (23%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF--------- 65
++++ Y +S ++++ F + R+ +SW +++ GY GR +A R+F
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340
Query: 66 -------DVMPE-----------------------KNVVSWNAMVGGLVRNGGLEGARMV 95
V+P N+ +A+V + G ++ AR +
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 96 FEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNV 151
F++ VSW +I G+A +G EA +LF++M+ + N + + ++++ G V
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 460
Query: 152 EAAYG 156
+ A+G
Sbjct: 461 DEAWG 465
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 67.4 bits (163), Expect = 4e-12, Method: Composition-based stats.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 14 CNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM----P 69
CN++L+ Y + G L + FE + ++N VSWTAM+ Y E A R F M
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 70 EKNVVSWNAMVG-----GLVRNG-GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEA 123
E N+V+ +++ GL+R G + G + E P +S ++ YAE G + +
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL-ALVELYAECGKLSDC 358
Query: 124 RALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ + RN++ W S+IS Y G V A GL
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGL 392
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM----PEK 71
++L Y Q+G L +A F+ MP R++V+W+ ++ + G V A R+F M E
Sbjct: 141 SLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEP 200
Query: 72 NVVSWNAMVGGLVRNGGLEGARMV----------FEQTPCRTVVSWNVMIAGYAENGAMD 121
+ V+ ++V G G L AR V ++T C N ++ Y++ G +
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC------NSLLTMYSKCGDLL 254
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ +F+++ +N ++WT+MIS Y R E A
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKA 287
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 5 VMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVED 60
V+ RNIV N+++S Y GM+ +A F M + + + + + +AG V
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 61 ARRVFDVMPEKNVVS---WNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAEN 117
+++ + +V N+++ ++G ++ A VF Q R+VV+WN M+ G+++N
Sbjct: 424 GKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
G EA +LFD M N +T+ ++I G++E
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVS 75
A++ Y + G L + + +RN+V+W +++ YA G V A +F M + +
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP 403
Query: 76 WNAMVGGLV---RNGGLEGARMVFEQTPCRTVVS----WNVMIAGYAENGAMDEARALFD 128
+ + N GL RT VS N +I Y+++G++D A +F+
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFN 463
Query: 129 QMEFRNVITWTSMISGYCRAGN-VEA 153
Q++ R+V+TW SM+ G+ + GN VEA
Sbjct: 464 QIKHRSVVTWNSMLCGFSQNGNSVEA 489
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 7/147 (4%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM----PE 70
N+++ Y +SG +D A F + R+VV+W +ML G++ G +A +FD M E
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502
Query: 71 KNVVSWNAMVGGLVRNGGLEGARMVFEQ---TPCRTVVSWNVMIAGYAENGAMDEARALF 127
N V++ A++ G LE + V + + + + + +I YA+ G ++ A +F
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVF 562
Query: 128 DQMEFRNVITWTSMISGYCRAGNVEAA 154
M R++++W+SMI+ Y G + +A
Sbjct: 563 RAMSSRSIVSWSSMINAYGMHGRIGSA 589
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEA----RWFFESMPERNVVSWTAMLGGYADAGR 57
+F+ + HR++VT N+ML G+ Q+G EA + + S E N V++ A++ + G
Sbjct: 461 VFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGS 520
Query: 58 VEDARRVFD---VMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGY 114
+E + V + K++ + A++ + G L A VF R++VSW+ MI Y
Sbjct: 521 LEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAY 580
Query: 115 AENGAMDEARALFDQM----EFRNVITWTSMISGYCRAGNVE 152
+G + A + F+QM N + + +++S +G+VE
Sbjct: 581 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 622
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGR 57
+FD MP RN+VT + M+ GY Q G +EA W F+ N+ S+++++ A++
Sbjct: 173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTL 232
Query: 58 VEDARRVFDVMPEKNVVSWNAMVGGLV----RNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+E R++ + + + S + + LV + G EGA VF + P + + WN M+
Sbjct: 233 LELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKA 292
Query: 114 YAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
YA++ + LF +M+ N IT+ ++++ AG V+
Sbjct: 293 YAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 67.0 bits (162), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP----E 70
+A+++ Y + G LD+A FESM ++V+WTA + G+A G +A R+F+ M +
Sbjct: 426 SALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMK 485
Query: 71 KNVVSWNAMV-----GGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARA 125
N V++ A++ GLV G M+ + T+ ++ MI YA +G +DEA
Sbjct: 486 PNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALK 545
Query: 126 LFDQMEFR-NVITWTSMISGYCRAGNVE 152
M F + ++W +SG N+E
Sbjct: 546 FMKNMPFEPDAMSWKCFLSGCWTHKNLE 573
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAM- 79
Y++ + A F+ + E N VSW+A++ GY + E+A + F + KN N+
Sbjct: 330 YIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFT 389
Query: 80 ---------------VGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEAR 124
+GG V ++ + ++ Q + +I Y++ G +D+A
Sbjct: 390 YTSIFQACSVLADCNIGGQVHADAIKRS-LIGSQ------YGESALITMYSKCGCLDDAN 442
Query: 125 ALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+F+ M+ +++ WT+ ISG+ GN A L
Sbjct: 443 EVFESMDNPDIVAWTAFISGHAYYGNASEALRL 475
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF-DVMPEKNVVSWNAM 79
Y++ G L A+ F+ M + V+ T ++ GY AGR DA ++F D++ E V W++
Sbjct: 229 YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG--VEWDSF 286
Query: 80 VGGLVRN--GGLEGARMVFEQTPC-------RTVVSWNVMIAGYAENGAMDEARALFDQM 130
V +V LE + + C V ++ Y + + + A F ++
Sbjct: 287 VFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI 346
Query: 131 EFRNVITWTSMISGYCRAGNVEAA 154
N ++W+++ISGYC+ E A
Sbjct: 347 REPNDVSWSAIISGYCQMSQFEEA 370
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM------ 68
N +L Y + L++A F+ M E N VS T M+ YA+ G ++ A +F M
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 69 PEKNVVSWNAMVGGLVRNGGLEGARM----VFEQTPCRTVVSWNVMIAGYAENGAMDEAR 124
P ++ + ++ LV L+ R V C ++ Y + G + A+
Sbjct: 182 PPSSM--YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239
Query: 125 ALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+FDQM + + T ++ GY +AG A L
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKL 272
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM------PERNVVSWTAMLGGYADA 55
LFD M N V+ M+S Y + G+LD+A F M P ++ +T +L +
Sbjct: 140 LFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM--YTTLLKSLVNP 197
Query: 56 GRVEDARRVFDVMPEKNVVSWNAMVGGL----VRNGGLEGARMVFEQTPCRTVVSWNVMI 111
++ R++ + + S ++ G+ V+ G L GA+ VF+Q + V+ ++
Sbjct: 198 RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLM 257
Query: 112 AGYAENGAMDEARALFDQMEFRNVITWTSMI 142
GY + G +A LF + V W S +
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGV-EWDSFV 287
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 28/155 (18%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ NA+++ Y ++G L+E R F SMPE + VSW +++G A + R +P
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER---------SLP 499
Query: 70 EKNVVSWNAMVGGLVRNG------------------GLEGARMVFEQTPCRTVVSWNVMI 111
E V NA G N G + + + + N +I
Sbjct: 500 EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALI 559
Query: 112 AGYAENGAMDEARALFDQM-EFRNVITWTSMISGY 145
A Y + G MD +F +M E R+ +TW SMISGY
Sbjct: 560 ACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 11/158 (6%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
+++ CN +++ YL++G AR F+ MP RN VSW ++ GY+ G ++A M
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 69 PEKNVVSWNAMVGGLVRN-------GGLEGAR---MVFEQTPCRTVVSWNVMIAGYAEN- 117
++ + S ++R G L G + ++F+ + V NV+I+ Y +
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 118 GAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAY 155
G++ A F +E +N ++W S+IS Y +AG+ +A+
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAF 191
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEAR---WFFESMPER-NVVSWTAMLGGYADAGRVEDARRV 64
R+ VT N+M+SGY+ + +L +A WF +R + + +L +A +E V
Sbjct: 582 RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV 641
Query: 65 F----DVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
E +VV +A+V + G L+ A F P R SWN MI+GYA +G
Sbjct: 642 HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQG 701
Query: 121 DEARALFDQMEFR-----NVITWTSMISGYCRAGNVEAAY 155
+EA LF+ M+ + +T+ ++S AG +E +
Sbjct: 702 EEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGF 741
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++V +A++ Y + G LD A FF +MP RN SW +M+ GYA G+ E+A ++F+ M
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 70 -----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTP-----CRTVVSWNVMIAGYAENGA 119
+ V++ ++ G LE FE + ++ M G
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 120 MDEARALFDQMEFR-NVITWTSMISGYCRAGNVEAAYG 156
+D+ ++M + NV+ W +++ CRA +A G
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELG 810
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPER-NVVSWTAMLGGYADAGRVEDARRV------ 64
T NA+++ Y + G +D F M ER + V+W +M+ GY + A +
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612
Query: 65 ----FDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
D V+S A V L R G+E VV + ++ Y++ G +
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLER--GMEVHACSVRACLESDVVVGSALVDMYSKCGRL 670
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
D A F+ M RN +W SMISGY R G E A L
Sbjct: 671 DYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKL 707
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 39/136 (28%)
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGG----------------LEGARMV 95
YA G + DARRVF M +K+ VSWN+M+ GL +NG L G+ +
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTL 418
Query: 96 FEQTPCRTVVSW-----------------------NVMIAGYAENGAMDEARALFDQMEF 132
+ W N ++ YAE G ++E R +F M
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 133 RNVITWTSMISGYCRA 148
+ ++W S+I R+
Sbjct: 479 HDQVSWNSIIGALARS 494
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF-------DV 67
+ ++S + +SG L AR F M RN V+ ++ G E+A ++F DV
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306
Query: 68 MPEKNVVSWNAMVG-GLVRNGGLEGARMVFEQTPCRTVVSW-----NVMIAGYAENGAMD 121
PE V+ ++ L GL+ R V +V + N ++ YA+ G++
Sbjct: 307 SPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366
Query: 122 EARALFDQMEFRNVITWTSMISG 144
+AR +F M ++ ++W SMI+G
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITG 389
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 11/158 (6%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQS-GMLDEARWFFESMPERNVVSWTAMLGGYADAGRVE 59
++F + + V N ++S Y + G + A F + +N VSW +++ Y+ AG
Sbjct: 129 LMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQR 188
Query: 60 DARRVFDVMPEKNVVSWNAMVGGLVRNGG--LEGARMVFEQTPCRTVVSWNV-------- 109
A R+F M G LV E + EQ C S +
Sbjct: 189 SAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSG 248
Query: 110 MIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCR 147
+++ +A++G++ AR +F+QME RN +T ++ G R
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 63 RVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDE 122
R++ +K+V N ++ + G AR VF++ P R VSW +++GY+ NG E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 123 A----RALFDQMEFRNVITWTSMISGYCRAGNVEAAYG 156
A R + + F N + S++ G+V +G
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFG 123
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP-----ERNVVSWTAMLGGYADAG 56
F+ MP RN + N+M+SGY + G +EA FE+M + V++ +L + AG
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 57 RVEDARRVFDVMPEK-----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR-TVVSWNVM 110
+E+ + F+ M + + ++ M L R G L+ E+ P + V+ W +
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795
Query: 111 IAGYAE-NGAMDE-----ARALFDQMEFRNVITWTSMISGYCRAG 149
+ NG E A LF Q+E N + + + + Y G
Sbjct: 796 LGACCRANGRKAELGKKAAEMLF-QLEPENAVNYVLLGNMYAAGG 839
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 67.0 bits (162), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDA---- 61
N++T NAM++ Y+ ++A F+ M N ++ +L + G +E
Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIH 556
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
R + + E N+ A++ + G LE +R +F+ + V WNVMI+GY +G ++
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616
Query: 122 EARALFDQMEFRNVI----TWTSMISGYCRAGNVE 152
A ALFDQME +V T+ +++S AG VE
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVE 651
Score = 63.2 bits (152), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 11 IVTCNAMLSGYLQSGMLDEA-RWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
I N+++ Y + G L A R F E+ + NV++W AM+ Y + E A +FD M
Sbjct: 468 ISVVNSLIDLYGKMGDLTVAWRMFCEA--DTNVITWNAMIASYVHCEQSEKAIALFDRMV 525
Query: 70 EKNV----VSWNAMVGGLVRNGGLEGARMV---FEQTPCRTVVSWNV-MIAGYAENGAMD 121
+N ++ ++ V G LE +M+ +T +S + +I YA+ G ++
Sbjct: 526 SENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLE 585
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
++R LFD ++ + W MISGY G+VE+A L
Sbjct: 586 KSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIAL 621
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGA 92
+RN + + Y+ G ++DA VFD MP+++VV+W A++ G V+NG EG
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 66.6 bits (161), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 21 YLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF-DVMPEK-----NVV 74
Y + G +D A + F MP RNVVSW+AM+ YA G+ +A R F ++M E N V
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS----WNVMIAGYAENGAMDEARALFDQM 130
+ +++ LE +++ R + S + ++ Y G ++ + +FD+M
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRM 346
Query: 131 EFRNVITWTSMISGY 145
R+V++W S+IS Y
Sbjct: 347 HDRDVVSWNSLISSY 361
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAG-------RVEDARR 63
+ NA++ Y ++G D A FE++ + +VVSW +L G+ D R++ A
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGV 170
Query: 64 VFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEA 123
VFD +S+ G + GL+ V + +V N I Y+ +G+ A
Sbjct: 171 VFDAFTYSTALSFCVGSEGFLL--GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGA 228
Query: 124 RALFDQMEFRNVITWTSMISGYCRAG 149
R +FD+M F+++I+W S++SG + G
Sbjct: 229 RRVFDEMSFKDMISWNSLLSGLSQEG 254
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF-----DVMP 69
N+ ++ Y + L++A+ FE + R ++SW AM+ G+A G +A ++F + MP
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMP 470
Query: 70 EKNVVSWNAMVGGL-------VRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDE 122
N ++ +++ + V+ G A ++ VVS + ++ YA+ G +DE
Sbjct: 471 --NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS-SALLDMYAKRGNIDE 527
Query: 123 ARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ +F++M +N WTS+IS Y G+ E L
Sbjct: 528 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNL 562
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 23/148 (15%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF------DVM 68
N ++S Y + G+L+ + F M ERNVVSWT M+ D DA +F V
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVY 369
Query: 69 PEK-------NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
P + N V N + ++ GL + F P N I YA+ A++
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGL-CIKTGFVSEPS----VGNSFITLYAKFEALE 424
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAG 149
+A+ F+ + FR +I+W +MISG+ + G
Sbjct: 425 DAKKAFEDITFREIISWNAMISGFAQNG 452
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVE-DARRVF-DV 67
++V N+ ++ Y +SG AR F+ M ++++SW ++L G + G +A +F D+
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267
Query: 68 MPEK---NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW----NVMIAGYAENGAM 120
M E + VS+ +++ L+ AR + R S N++++ Y++ G +
Sbjct: 268 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 327
Query: 121 DEARALFDQMEFRNVITWTSMIS 143
+ +++F QM RNV++WT+MIS
Sbjct: 328 EAVKSVFHQMSERNVVSWTTMIS 350
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFF-----ESMPERNVVSWTAMLGGYADAGR 57
F+ + R I++ NAM+SG+ Q+G EA F E+MP +A+
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDIS 489
Query: 58 VEDARRVFDVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
V+ +R + + + V +A++ + G ++ + VF + + W +I+
Sbjct: 490 VKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISA 549
Query: 114 YAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAY 155
Y+ +G + LF +M NV +T+ S+++ R G V+ Y
Sbjct: 550 YSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGY 595
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLD-EARWFFESM----PERNVVSWTAMLGGYADAG 56
+FD M +++++ N++LSG Q G EA F M E + VS+T+++
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET 290
Query: 57 RVEDARRVFDVMPEKNVVSW----NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
++ AR++ + ++ S N ++ + G LE + VF Q R VVSW MI+
Sbjct: 291 DLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS 350
Query: 113 GYAENGAMDEARALFDQMEFR----NVITWTSMISG 144
D+A ++F M F N +T+ +I+
Sbjct: 351 SNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINA 381
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 75/224 (33%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGG--------- 51
+LFD MP R++ + NAM+SGY QSG EA + + V+ ++L
Sbjct: 206 ILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNR 265
Query: 52 --------------------------YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVR 85
YA+ GR+ D ++VFD M ++++SWN+++
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYEL 325
Query: 86 NGGLEGARMVFE-------QTPCRTVVS-------------------------W------ 107
N A +F+ Q C T++S W
Sbjct: 326 NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT 385
Query: 108 --NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
N ++ YA+ G +D ARA+F+ + +VI+W ++ISGY + G
Sbjct: 386 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNG 429
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 36/170 (21%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
+N+ +++ Y G + AR F+ + R+V +W M+ GY AG + R F +
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSL- 142
Query: 69 PEKNVVSWNAMVGGLVRNGGLEGARMVFEQT--PCRTVVS--------------WNVMIA 112
+ + GL F CRTV+ W+V +A
Sbjct: 143 --------------FMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVA 188
Query: 113 G-----YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
Y+ A+ AR LFD+M R++ +W +MISGYC++GN + A L
Sbjct: 189 ASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL 238
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 44/187 (23%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
+I NA++ Y + G++D AR F +P +V+SW ++ GYA G +A ++++M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 70 EKNVVSWN---------------------AMVGGLVRN-------------------GGL 89
E+ ++ N + G L++N G L
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGY 145
E A +F Q P V WN +IA + +G ++A LF +M V IT+ +++S
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 146 CRAGNVE 152
+G V+
Sbjct: 563 SHSGLVD 569
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 49/202 (24%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER-----NVVSWTAMLGG----- 51
+F+ +P+ ++++ N ++SGY Q+G EA + M E N +W ++L
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 52 ------------------------------YADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
Y GR+EDA +F +P N V WN ++
Sbjct: 466 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 525
Query: 82 GLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQMEFRNVIT 137
+G E A M+F++ V +++ +++ + +G +DE + F+ M+ IT
Sbjct: 526 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 585
Query: 138 -----WTSMISGYCRAGNVEAA 154
+ M+ Y RAG +E A
Sbjct: 586 PSLKHYGCMVDMYGRAGQLETA 607
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGR 57
+FD M R++++ N+++ Y + A F+ M + + ++ ++ + G
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGD 363
Query: 58 VEDARRVFDVMPEK-----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
+ R V K ++ NA+V + G ++ AR VF P V+SWN +I+
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIIS 423
Query: 113 GYAENGAMDEARALFDQMEFRNVI-----TWTSMISGYCRAG 149
GYA+NG EA +++ ME I TW S++ +AG
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
+ N+ ++ Y++ G ++ R F+ MP + +++W A++ GY+ G D +++ M
Sbjct: 191 VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS 250
Query: 71 K----------NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
+V+S A +G + G E ++V V N I+ YA G +
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGA--KKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 121 DEARALFDQMEFRNVITWTSMISGY 145
+ARA+FD M +++++WT+MI Y
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMIGCY 333
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGR 57
LFD MP + ++T NA++SGY Q+G+ + +E M V + ++L A G
Sbjct: 213 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGA 272
Query: 58 VEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+ V ++ NV NA + R G L AR VF+ P +++VSW MI
Sbjct: 273 KKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGC 332
Query: 114 YAENGAMDEARALFDQMEFRNV 135
Y +G + LFD M R +
Sbjct: 333 YGMHGMGEIGLMLFDDMIKRGI 354
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 32/156 (20%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVS--WTAMLGGYADAGRVEDARRVFDVMPEKN 72
A++S Y + G++ +AR FE P+ + +S + A++ GY +V DA +F M E
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 73 VVSWNAMVGGLVR-------------------NGGLEGARMVFEQTPCRTVVSWNVMIAG 113
V + + GLV GGL+ V N I
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS-----------EVAVLNSFITM 200
Query: 114 YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
Y + G+++ R LFD+M + +ITW ++ISGY + G
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNG 236
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 66.2 bits (160), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 6 MPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRVEDA 61
M H N VT N +++G+ G + A M N V++ A++ G+ G ++A
Sbjct: 333 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Query: 62 RRVFDVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTP----CRTVVSWNVMIAG 113
++F +M K + VS+ ++ GL +N + AR + + C +++ MI G
Sbjct: 393 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 114 YAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+NG +DEA L ++M +++T++++I+G+C+ G + A
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 497
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 16/157 (10%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRV 64
R+ T N +++ ++G + EA F M N VS+ ++ GY ++G A V
Sbjct: 546 RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 605
Query: 65 FDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQ---TPCRT-VVSWNVMIAGYAE 116
FD M + ++ +++ GL + G L A + P V +N ++ +
Sbjct: 606 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665
Query: 117 NGAMDEARALFDQMEFRNVI----TWTSMISGYCRAG 149
+G + +A +LF +M R+++ T+TS+ISG CR G
Sbjct: 666 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 13/145 (8%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKN 72
T N ++ Y++ ++ AR F+ M E NVVSWT+++ GY D G+ ++A +F M E
Sbjct: 66 TVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDR 125
Query: 73 VVSWNAMVGGLV----------RNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDE 122
V N V R G AR+ R +V + ++ Y + ++
Sbjct: 126 PVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLR-RNIVVSSSLVDMYGKCNDVET 184
Query: 123 ARALFDQM--EFRNVITWTSMISGY 145
AR +FD M RNV++WTSMI+ Y
Sbjct: 185 ARRVFDSMIGYGRNVVSWTSMITAY 209
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 34/172 (19%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPE--RNVVSWTAMLGGYADAGRVEDARRVFD 66
RNIV ++++ Y + ++ AR F+SM RNVVSWT+M+ YA R +A +F
Sbjct: 164 RNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFR 223
Query: 67 VMPE------------KNVVS---------WNAMVGGLVRNGGLEGARMVFEQTPCRTVV 105
+V+S W + GLV GG E TVV
Sbjct: 224 SFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES----------NTVV 273
Query: 106 SWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ + ++ YA+ G++ A +F ++ +VI++TSMI + G EAA L
Sbjct: 274 ATS-LLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKL 324
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 66.2 bits (160), Expect = 9e-12, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 76/211 (36%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRV---------- 64
N ++S Y + G L EAR + M R+VVSW +++ GYA R +DA V
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 65 ---------------------------FDVMPEKNVVSWNAMVGGLVRNG---------- 87
F M +K++VSWN M+G ++N
Sbjct: 239 HDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYS 298
Query: 88 -----GLE---------------------GARM---VFEQTPCRTVVSWNVMIAGYAENG 118
G E G ++ + + ++ N +I YA+ G
Sbjct: 299 RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCG 358
Query: 119 AMDEARALFDQMEFRNVITWTSMISGYCRAG 149
+++AR +F+ M+ R+V++WT+MIS Y +G
Sbjct: 359 CLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
+FD +P RN++ N M+ Y+ +G E F +M NV ++ +L + +G
Sbjct: 96 VFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT 155
Query: 58 VEDARRVFDVMPEKNVVSWNAMVGGLV----RNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+ R++ + + S + GLV + G L AR+V ++ R VVSWN ++ G
Sbjct: 156 IVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 114 YAENGAMDEARALFDQME 131
YA+N D+A + +ME
Sbjct: 216 YAQNQRFDDALEVCREME 233
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 32/151 (21%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N++ NA++ Y + G L++AR FE+M R+VVSWTAM+ Y +GR DA +F +
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
+ GLV + +++ +A + G ++E R+ F
Sbjct: 403 DS----------GLVPDS-----------------IAFVTTLAACSHAGLLEEGRSCFKL 435
Query: 130 MEFRNVIT-----WTSMISGYCRAGNVEAAY 155
M IT M+ RAG V+ AY
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 39/139 (28%)
Query: 48 MLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQT-------- 99
++ YA V AR+VFD +PE+NV+ N M+ V NG VF
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 100 ----PC---------------------------RTVVSWNVMIAGYAENGAMDEARALFD 128
PC T+ N +++ Y + G + EAR + D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 129 QMEFRNVITWTSMISGYCR 147
+M R+V++W S++ GY +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQ 218
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 66.2 bits (160), Expect = 9e-12, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 43/190 (22%)
Query: 6 MPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF 65
+P + V +L Y + G + A F + RNVV WT+M+ GY E+ +F
Sbjct: 171 VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLF 230
Query: 66 DVMPEKNVVSWNAMVGGL---------------------------------------VRN 86
+ M E NV+ G L V+
Sbjct: 231 NRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKC 290
Query: 87 GGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM---EFR-NVITWTSMI 142
G + AR VF + +V W MI GY NG+++EA +LF +M E + N +T S++
Sbjct: 291 GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL 350
Query: 143 SGYCRAGNVE 152
SG N+E
Sbjct: 351 SGCGLIENLE 360
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 54/205 (26%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVS----------------- 44
+F++ ++IV N+++SG+ Q+G + EA + F M +V
Sbjct: 399 VFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGS 458
Query: 45 ------------------------WTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMV 80
TA+L YA G + AR +FD + EKN ++W+AM+
Sbjct: 459 LAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518
Query: 81 GGLVRNGGLEGARMVFE------QTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRN 134
GG + G G+ +FE Q P + ++ +++ G ++E + F M
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNES--TFTSILSACGHTGMVNEGKKYFSSMYKDY 576
Query: 135 VIT-----WTSMISGYCRAGNVEAA 154
T +T M+ RAG +E A
Sbjct: 577 NFTPSTKHYTCMVDMLARAGELEQA 601
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGR 57
+F+ H ++V AM+ GY +G ++EA F+ M + N V+ ++L G
Sbjct: 299 VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIEN 358
Query: 58 VEDARRVFDV-----MPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
+E R V + + + NV NA+V + A+ VFE + +V+WN +I+
Sbjct: 359 LELGRSVHGLSIKVGIWDTNVA--NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIIS 416
Query: 113 GYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
G+++NG++ EA LF +M +V +T S+ S G++ L
Sbjct: 417 GFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 66.2 bits (160), Expect = 9e-12, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 19/172 (11%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRV 58
F + P N+V N ++ G+ G + +A F M E N+ ++ +++ G+A G +
Sbjct: 346 FGLQP--NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSL 403
Query: 59 EDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFE----QTPCRTVVSWNVM 110
+ A +++ M NVV + MV L R+ + A + E + +V ++N
Sbjct: 404 DGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAF 463
Query: 111 IAGYAENGAMDEARALFDQMEFR-----NVITWTSMISGYCRAGNVEAAYGL 157
I G + G +D A +F QME + N++T+ ++ G +A +E AYGL
Sbjct: 464 IKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLG--GYADA 55
+FD +++VT N M+ Y ++G+L+E W M + N ++ +L Y++A
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEA 343
Query: 56 GRVEDARRVFDVMPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
V R V D++ E+ + + A+V + G LE A +F + + V SW MI
Sbjct: 344 AFV--GRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMI 401
Query: 112 AGYAENGAMDEARALFDQMEFRN 134
+GY +G EA LF++ME N
Sbjct: 402 SGYGAHGLAREAVTLFNKMEEEN 424
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 39/151 (25%)
Query: 46 TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGA-----RMVFEQ-- 98
TA++G Y G + ARR+FD K+VV+WN M+ + G LE +M +E+
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK 325
Query: 99 ----------TPC---------RTVVSW-------------NVMIAGYAENGAMDEARAL 126
+ C RTV ++ YA+ G +++A +
Sbjct: 326 PNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEI 385
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
F++M+ ++V +WT+MISGY G A L
Sbjct: 386 FNRMKDKDVKSWTAMISGYGAHGLAREAVTL 416
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 40/170 (23%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPER-NVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV 73
NA++ Y G + +AR F+ MP+ + V+++ ++ GY + A +F +M + V
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 74 VS---------------------------------------WNAMVGGLVRNGGLEGARM 94
V A++G + GG+ AR
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 95 VFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISG 144
+F+ + VV+WN MI YA+ G ++E L QM++ + +S G
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG 333
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKN--- 72
A++ Y + G+L++A F M +++V SWTAM+ GY G +A +F+ M E+N
Sbjct: 368 ALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKV 427
Query: 73 -------VVSWNAMV-GGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEAR 124
+V NA GGLV G RMV + V + ++ G ++EA
Sbjct: 428 RPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAY 487
Query: 125 ALFDQMEFRNVIT-WTSMISGYCRA-GNVE 152
L + + T W ++++ CR GN +
Sbjct: 488 ELIRNLPITSDSTAWRALLAA-CRVYGNAD 516
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 86/164 (52%), Gaps = 21/164 (12%)
Query: 10 NIVTCNAMLSGYLQSGM-LDEARWFFESM------PERNVVSWTAMLGGYADAGRVEDAR 62
N+VT NA++ + GM + FF+ M P+R +++ ++L + G E AR
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDR--ITFNSLLAVCSRGGLWEAAR 359
Query: 63 RVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGY 114
+FD M E++V S+N ++ + + G ++ A + Q P + VVS++ +I G+
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGF 419
Query: 115 AENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAA 154
A+ G DEA LF +M + + +++ +++S Y + G E A
Sbjct: 420 AKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVFDV 67
V+ N +LS Y + G +EA M +++VV++ A+LGGY G+ ++ ++VF
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 68 MPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPC----RTVVSWNVMIAGYAENGA 119
M + N+++++ ++ G + G + A +F + VV ++ +I +NG
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 120 MDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
+ A +L D+M NV+T+ S+I + R+ ++
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAG-RVEDARRVFDVMP 69
+A++S Y +SG+ +EA F SM E N+V++ A++ G + + FD M
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 70 EKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAMD 121
V +++N+++ R G E AR +F++ R V S+N ++ + G MD
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 122 EARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
A + QM + NV++++++I G+ +AG + A L
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRV 64
+++VT NA+L GY + G DE + F M N+++++ ++ GY+ G ++A +
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 65 FDVMPE----KNVVSWNAMVGGLVRNGGLEGA-RMVFEQTP---CRTVVSWNVMIAGYAE 116
F +VV ++A++ L +NG + A ++ E T VV++N +I +
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 117 NGAMDEA 123
+ MD +
Sbjct: 597 SATMDRS 603
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 84/161 (52%), Gaps = 23/161 (14%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
+AM+S + G + A+ FE+ V +++A++ Y +G E+A VF+ M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 71 ----KNVVSWNAMVGGLVRNGGLEGARMV--FEQ------TPCRTVVSWNVMIAGYAENG 118
N+V++NA++ + GG+E ++ F++ P R +++N ++A + G
Sbjct: 297 YGLRPNLVTYNAVIDACGK-GGMEFKQVAKFFDEMQRNGVQPDR--ITFNSLLAVCSRGG 353
Query: 119 AMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAY 155
+ AR LFD+M R +V ++ +++ C+ G ++ A+
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAF 394
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
+ D+ ++ NA++ Y + G+L AR F+ MP R++VSW +++ GY+ G E+A
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 62 RRVFD------VMPEKNVVSWNAMVGG---LVRNG-GLEGARMVFEQTPCRTVVSWNVMI 111
++ ++P+ VS G +V+ G GL G + VV N ++
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHG--FALKSGVNSVVVVNNGLV 249
Query: 112 AGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
A Y + +AR +FD+M+ R+ +++ +MI GY + VE +
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEES 292
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 87/167 (52%), Gaps = 11/167 (6%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEA-RWFFESMPE--RNVVSWTAMLGGYADAGRV 58
+FD M R+ V+ N M+ GYL+ M++E+ R F E++ + ++++ +++L +
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDL 323
Query: 59 EDARRVFDVMPEKNVV----SWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGY 114
A+ +++ M + V N ++ + G + AR VF C+ VSWN +I+GY
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 115 AENGAMDEARALFDQM----EFRNVITWTSMISGYCRAGNVEAAYGL 157
++G + EA LF M E + IT+ +IS R +++ GL
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Score = 62.8 bits (151), Expect = 8e-11, Method: Composition-based stats.
Identities = 58/233 (24%), Positives = 93/233 (39%), Gaps = 77/233 (33%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV--SWTA------------ 47
+FD MP R++V+ N+++SGY G +EA + + +V S+T
Sbjct: 163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLV 222
Query: 48 -------------------------MLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
++ Y R DARRVFD M ++ VS+N M+ G
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG 282
Query: 83 LVRNGGLE-GARMVFEQ----TPCRTVVS------------------------------- 106
++ +E RM E P VS
Sbjct: 283 YLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES 342
Query: 107 --WNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
N++I YA+ G M AR +F+ ME ++ ++W S+ISGY ++G++ A L
Sbjct: 343 TVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKL 395
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 5 VMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV-------SWTAMLGGYADAGR 57
V P +N+ N+++ + ++G+ EA F+ + E V S G DA
Sbjct: 65 VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 58 VEDA-RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAE 116
+ ++ D+ E ++ NA+V R G L AR VF++ P R +VSWN +I+GY+
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 117 NGAMDEARALFDQME 131
+G +EA ++ +++
Sbjct: 185 HGYYEEALEIYHELK 199
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM----PE 70
N ++ Y + G + AR F SM ++ VSW +++ GY +G + +A ++F +M +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 71 KNVVSWNAMVGGLVRNGGLEGARMV----FEQTPCRTVVSWNVMIAGYAENGAMDEARAL 126
+ +++ ++ R L+ + + + C + N +I YA+ G + ++ +
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 127 FDQMEFRNVITWTSMISGYCRAGN 150
F M + +TW ++IS R G+
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGD 489
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 33 FFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRN-GGLEG 91
F P +NV W +++ ++ G +A + + E V +++ GL
Sbjct: 62 FRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFD 121
Query: 92 ARM---VFEQTPCRTVVS----WNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISG 144
A M V+EQ S N ++ Y+ G + AR +FD+M R++++W S+ISG
Sbjct: 122 AEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISG 181
Query: 145 YCRAGNVEAA 154
Y G E A
Sbjct: 182 YSSHGYYEEA 191
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 18/146 (12%)
Query: 25 GMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDVMPE-------KNV 73
G ++EA F M + +V+++T ++GG G+ DA FD+M E ++
Sbjct: 410 GKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDA---FDLMIEMDGTGKTPDI 466
Query: 74 VSWNAMVGGLVRNG----GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
V +N + GGL NG E +M+ + T V+ N++I G + G +D+A A ++
Sbjct: 467 VIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYES 526
Query: 130 MEFRNVITWTSMISGYCRAGNVEAAY 155
+E ++ SM+ G+C AG ++ A+
Sbjct: 527 LEHKSRENDASMVKGFCAAGCLDHAF 552
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 78/148 (52%), Gaps = 12/148 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA----RRVF 65
N+ A+L Y + GM+ +A FESM +++ V+W++M+ GY E+A RR
Sbjct: 196 NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ 255
Query: 66 DVMPEKNVVSWNAMVGGLVRNGGL-EGARMVFEQTPCRTVVSWNVMIAG-----YAENGA 119
+ E+N + ++++ L EG +M C++ NV +A YA+ G+
Sbjct: 256 RMSLEQNQFTLSSVICACSNLAALIEGKQM--HAVICKSGFGSNVFVASSAVDMYAKCGS 313
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCR 147
+ E+ +F +++ +N+ W ++ISG+ +
Sbjct: 314 LRESYIIFSEVQEKNLELWNTIISGFAK 341
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ N +++ Y + G ++ AR F+ M ER++VSW M+G Y +A +F M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC---RTVVSWNVMIAG-----YAENGAMD 121
+ + ++ G+ + ++ C +T + N+ + YA+ G +
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+A +F+ M+ ++ +TW+SM++GY + N E A
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 88/165 (53%), Gaps = 20/165 (12%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVFD 66
+VT +++ G + LDEA FE E NVV +++++ G+ GR+++A + +
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 67 VMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQ------TPCRTVVSWNVMIAGYAE 116
+ +K N+ +WN+++ LV+ + A + F+ TP + V++ ++I G +
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ--VTYGILINGLCK 739
Query: 117 NGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
++A + +M+ + + I++T+MISG +AGN+ A L
Sbjct: 740 VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 29/178 (16%)
Query: 2 LFDVMPHRNIVTC----NAMLSGYLQSGMLDEARWFFE------SMPERNVVSWTAMLGG 51
+F+ + V C N M+ GY +G DEA E S+P +V+++ +L
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP--SVIAYNCILTC 352
Query: 52 YADAGRVEDARRVFDVMPEK---NVVSWNAMVGGLVRNGGLEGARMVFEQTP-------C 101
G+V++A +VF+ M + N+ ++N ++ L R G L+ A + +
Sbjct: 353 LRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNV 412
Query: 102 RTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAY 155
RTV N+M+ ++ +DEA A+F++M+++ + IT+ S+I G + G V+ AY
Sbjct: 413 RTV---NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Score = 58.9 bits (141), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 16/157 (10%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGRVEDARRVFDVMPE 70
N + ++G ++ R FE + R V S++ ++ G AG + +F M E
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 71 KNVV----SWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAMDE 122
+ V ++N ++ G + G + A + E+ + TVV++ +I G A+ +DE
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 123 ARALFDQMEFR----NVITWTSMISGYCRAGNVEAAY 155
A LF++ + + NV+ ++S+I G+ + G ++ AY
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+V ++++ G+ + G +DEA E + ++ N+ +W ++L A + +A F
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 66 DVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAEN 117
M E N V++ ++ GL + A + +++ + + +S+ MI+G A+
Sbjct: 716 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 775
Query: 118 GAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAAYGL 157
G + EA ALFD+ + + + +MI G A+ L
Sbjct: 776 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 51/199 (25%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+ T N M+ +S LDEA FE M + + +++ +++ G GRV+DA +V+
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 66 DVMPEKNVVSWNAMVGGLVRN--------------------------------------- 86
+ M + + + + + L++N
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 87 GGLEGARMVFEQTPCRTVV----SWNVMIAGYAENGAMDEARALFDQMEFRNVI----TW 138
G E R +FE+ R V S++++I G + G +E LF M+ + + +
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 139 TSMISGYCRAGNVEAAYGL 157
+I G+C+ G V AY L
Sbjct: 591 NIVIDGFCKCGKVNKAYQL 609
Score = 48.1 bits (113), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 20/156 (12%)
Query: 17 MLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKN 72
++ G+ + G +D A + M + ++V + + + G+V+ A + F +
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 73 V----VSWNAMVGGLVRNGGLEGARMVFE------QTPCRTVVSWNVMIAGYAENGAMDE 122
+ V++ +M+G L + L+ A +FE + PC ++N MI GY G DE
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC--TYAYNTMIMGYGSAGKFDE 326
Query: 123 ARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
A +L ++ + +VI + +++ + G V+ A
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM- 68
N++T N ++ Y + A F+SMPERNVVSW+A++ G+ G ++ + +F M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 69 -----PEKNVVSWNAMVGGLVR--NGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMD 121
P + S N GL+ GL+ + V N ++ Y++ G ++
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAG 149
EA +F ++ R++I+W +MI+G+ AG
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 43/163 (26%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV- 73
N+++ Y + G ++EA F + +R+++SW AM+ G+ AG A F +M E N+
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 74 --------------VSWNAMV-------GGLVRNG---------------------GLEG 91
S M+ G LVR+G L
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 92 ARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRN 134
AR F+Q +T++SW+ +I GYA+ G EA LF +++ N
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Score = 53.1 bits (126), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 16/151 (10%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV- 73
N+++ YL+ G++DEA F M ++V+SWT ++ GY G + + R+F M N+
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Query: 74 ---VSWNAMVGGLVRNGGLEGARMVFEQ-------TPCRTVVSWNVMIAGYAENGAMDEA 123
V + A++ +G ++ +F + P V + ++ G + EA
Sbjct: 412 PDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKP--RVEHYACVVDLLGRAGRLKEA 469
Query: 124 RALFDQMEFR-NVITWTSMISGYCRA-GNVE 152
+ L D M + NV W +++S CR G++E
Sbjct: 470 KHLIDTMPIKPNVGIWQTLLS-LCRVHGDIE 499
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN----VVSWTAMLGGYADAGRV 58
FD + + +++ ++++ GY Q G EA F+ + E N + ++++G +AD +
Sbjct: 270 FDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALL 329
Query: 59 EDARRVFDV---MP---EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
+++ + +P E +V+ N++V ++ G ++ A F + + V+SW V+I
Sbjct: 330 RQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVIT 387
Query: 113 GYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
GY ++G ++ +F +M N+ + + +++S +G ++
Sbjct: 388 GYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIK 431
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 43/191 (22%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM- 68
++ CNA++S Y + + AR F+ M ER+ VSW A++ YA G +A +FD M
Sbjct: 178 SLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMW 237
Query: 69 ---PEKNVVSWNAMVGGLVRNGGLEGA-----------------RMVFEQTPCRTVVSW- 107
E +V++WN + GG ++ G GA M+ C + +
Sbjct: 238 FSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIR 297
Query: 108 ---------------------NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYC 146
N +I Y++ + A +F Q E ++ TW S+ISGY
Sbjct: 298 LGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYA 357
Query: 147 RAGNVEAAYGL 157
+ E A L
Sbjct: 358 QLNKSEEASHL 368
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP----E 70
N +++ Y + L A F E ++ +W +++ GYA + E+A + M +
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 71 KNVVSWNAMVGGLVRNGGLEGAR-----MVFEQTPCRTVVSWNVMIAGYAENGAMDEARA 125
N ++ +++ R L+ + ++ + + WN ++ YA++G + A+
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 126 LFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ D M R+ +T+TS+I GY G A L
Sbjct: 439 VSDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAG 56
+LF + R+++ NAM+SGY+Q G+ E + + M + +V ++ ++ +
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 223
Query: 57 RVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIA 112
R+E +R VM ++ N++ +A+V + VF+Q R V++W +I+
Sbjct: 224 RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLIS 283
Query: 113 GYAENGAMDEARALFDQME 131
GY +G + E F++M+
Sbjct: 284 GYGYHGKVSEVLKCFEKMK 302
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 65.1 bits (157), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 37/143 (25%)
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLE----------GARMVFEQTPC 101
Y + DAR+VFD M E+NVVSWN+++ LV NG L G R ++T
Sbjct: 158 YGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTM 217
Query: 102 RTVVS---------------------------WNVMIAGYAENGAMDEARALFDQMEFRN 134
++S ++ YA++G ++ AR +F++M +N
Sbjct: 218 VVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKN 277
Query: 135 VITWTSMISGYCRAGNVEAAYGL 157
V TW++MI G + G E A L
Sbjct: 278 VWTWSAMIVGLAQYGFAEEALQL 300
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEA-RWFFESMPERNVVSWTAML------GGYAD 54
+FD M RN+V+ N++++ +++G L+ F E + +R T M+ GG
Sbjct: 170 VFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLS 229
Query: 55 AGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGY 114
G++ ++ + + E N A+V ++GGLE AR+VFE+ + V +W+ MI G
Sbjct: 230 LGKLVHSQVMVREL-ELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGL 288
Query: 115 AENGAMDEARALFDQMEFR-----NVITWTSMISGYCRAGNVEAAY 155
A+ G +EA LF +M N +T+ ++ G V+ Y
Sbjct: 289 AQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGY 334
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N++ +++ Y + G L AR+ F+ MPER +VSW +++ GY+ G E+A +F M
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNV--------MIAGYAENGAMD 121
+ + ++R ++G + + + V ++ YA+ G +
Sbjct: 310 DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAE 369
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGN 150
A+ F+ +E ++ I WT +I G G+
Sbjct: 370 SAKKAFEDLEKKDTIAWTVVIIGLASHGH 398
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 58/203 (28%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF---- 65
N+ +L Y+ G ++ FE +P+ NVV+W +++ G+ + R DA F
Sbjct: 141 NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ 200
Query: 66 ----------------------DVMPEK---------------------NVVSWNAMVGG 82
D++ K NV+ +++
Sbjct: 201 SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDM 260
Query: 83 LVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALF----------DQMEF 132
+ G L AR +F+ P RT+VSWN +I GY++NG +EA +F D++ F
Sbjct: 261 YAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTF 320
Query: 133 RNVITWTSMISGYCRAGNVEAAY 155
+VI SMI G + G AY
Sbjct: 321 LSVIR-ASMIQGCSQLGQSIHAY 342
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 6 MPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA---- 61
+P I NA++S Y +SG L +ARW F+ MPE N VS+ M+ GYA G +A
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS-----WNVMIAGYAE 116
+R+ D N +++ A++ G ++ + F + ++ MI
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 117 NGAMDEARALFDQMEFR-NVITWTSMISGYCR 147
G ++EA D M ++ + W +++ G CR
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALL-GACR 526
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 38/169 (22%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N ++ Y + G L AR F S E NV S+ ++ YA ++ AR++FD +P+ + V
Sbjct: 47 NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTV 106
Query: 75 SWNAMVGGLVRNGGLEGARMVF-----------------------------EQTPCRTVV 105
S+N ++ G A ++F +Q C +V
Sbjct: 107 SYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVS 166
Query: 106 SW--------NVMIAGYAENGAMDEARALFDQM-EFRNVITWTSMISGY 145
N + Y++ G + EA ++F M E R+ ++W SMI Y
Sbjct: 167 GGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAY 215
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGR 57
+FD MP N V+ N M+ GY Q G EA ++ M + N +++ A+L A G+
Sbjct: 403 VFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGK 462
Query: 58 VEDARRVFDVMPEKNVVS-----WNAMVGGLVRNGGLEGARMVFEQTPCRT-VVSWNVMI 111
V++ + F+ M E + ++ M+ L R G LE A + P + V+W ++
Sbjct: 463 VDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Query: 112 AG 113
Sbjct: 523 GA 524
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
N T N ++SGY +SG LD+ + M VS+ ++ G+ + G + A ++
Sbjct: 237 NPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
++M + NVV++N ++ G R L+ A VF + V V++N +I GY++
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 118 GAMDEARALFDQMEF----RNVITWTSMISGYCRAGNVEAA 154
G + A ++ M R+++T+ ++I G C+ A
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 12 VTCNAMLSGYLQSGMLDEA----RWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDV 67
V+ N +++G+ + G+L A +S + NVV++ ++ G+ A ++++A +VF
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 68 MPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPC----RTVVSWNVMIAGYAENGA 119
M NV V++N ++ G + G E A +E C R ++++N +I G +
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 120 MDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAAYGL 157
+A +++ N++ T++++I G C N + + L
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL 435
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
N T N ++SGY +SG LD+ + M VS+ ++ G+ + G + A ++
Sbjct: 237 NPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
++M + NVV++N ++ G R L+ A VF + V V++N +I GY++
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 118 GAMDEARALFDQMEF----RNVITWTSMISGYCRAGNVEAA 154
G + A ++ M R+++T+ ++I G C+ A
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 81/162 (50%), Gaps = 16/162 (9%)
Query: 12 VTCNAMLSGYLQSGMLDEA----RWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDV 67
V+ N +++G+ + G+L A +S + NVV++ ++ G+ A ++++A +VF
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 68 MPEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPC----RTVVSWNVMIAGYAENGA 119
M NV V++N ++ G + G E A +E C R ++++N +I G +
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 120 MDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAAYGL 157
+A +++ N++ T++++I G C N + + L
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL 435
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 18/170 (10%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVE 59
D P ++ T N ++ G+ +S +++ F M R + V++T ++ G G +
Sbjct: 320 DCFP--DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 60 DARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMI 111
+A++VF M ++++++ ++ GL NG LE A VF+ + + MI
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 112 AGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
G + G +D+ LF + + NV+T+ +MISG C ++ AY L
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Score = 64.7 bits (156), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 90/199 (45%), Gaps = 51/199 (25%)
Query: 10 NIVTCNAMLSGYLQSGM-----------------------------------LDEARWFF 34
N+VT NA++ +++ G LD+A+ F
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 35 ESMPERNVV----SWTAMLGGYADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRN 86
E M ++ ++ ++ G+ + RVED +F M + + V++ ++ GL +
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 373
Query: 87 GGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQMEFR----NVITW 138
G + A+ VF+Q V +++++++ G NG +++A +FD M+ ++ +
Sbjct: 374 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 139 TSMISGYCRAGNVEAAYGL 157
T+MI G C+AG V+ + L
Sbjct: 434 TTMIEGMCKAGKVDDGWDL 452
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 2 LFDVMPHRNIV----TCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYA 53
LF M HR +V T ++ G G D A+ F+ M ++++++ +L G
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 54 DAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVV 105
+ G++E A VFD M + ++ + M+ G+ + G ++ +F + VV
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466
Query: 106 SWNVMIAGYAENGAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAA 154
++N MI+G + EA AL +M+ + T+ ++I + R G+ A+
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
+IVT +++L+GY + +A + M E + +++T ++ G + +A +
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRT----VVSWNVMIAGYAEN 117
D M ++ N+V++ +V GL + G ++ A + + VV +N +I +
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 118 GAMDEARALFDQMEFR----NVITWTSMISGYCRAG 149
+D+A LF +ME + NV+T++S+IS C G
Sbjct: 199 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 22 LQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
L+ G L R +S VS ++ Y+ +G + +AR VFD M E+NV SWNA++
Sbjct: 4 LKDGFLHHIR-SIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIA 62
Query: 82 GLVRNGGLEGARMVFEQTPC-RTVVSWNVMIAGYAE-NGAMDEARALFDQM 130
V+ ++ AR +FE C R ++++N +++G+A+ +G EA +F +M
Sbjct: 63 AYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEM 113
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 42/175 (24%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPERN-VVSWTAMLGGYADAGRVEDARRVFDVMPE 70
V NAM++ Y + G +D+A F PE N +SW ++ GYA G E+A ++ M E
Sbjct: 194 VARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM-E 252
Query: 71 KNVVSWNAMVGGLVRN----------GGLEGARMVFEQTPCRTVVSWNV----------- 109
+N + W+ G V N G AR++ + VS +
Sbjct: 253 ENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMK 312
Query: 110 -------------------MIAGYAENGAMDEARALFDQMEFRNVITWTSMISGY 145
MI GY+ G M EA+ LFD + +N++ WT+M GY
Sbjct: 313 YAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGY 367
Score = 61.2 bits (147), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 46/189 (24%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDV-MPE 70
V+ N +++ Y +SG+L EAR F+ M ERNV SW A++ Y V++AR +F+ E
Sbjct: 24 VSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCE 83
Query: 71 KNVVSWNAMVGGLVRNGGLEGARM---------------------------------VF- 96
++++++N ++ G + G E + VF
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 97 -EQTPCRTVVSWN--------VMIAGYAENGAMDEARALFDQ--MEFRNVITWTSMISGY 145
EQ V + N +I Y++ G E +F+ +EF + + +MI+ Y
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 146 CRAGNVEAA 154
CR G+++ A
Sbjct: 204 CREGDIDKA 212
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 49/201 (24%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFES-MPERNVVSWTAMLGGYADAGRVE- 59
+FD M RN+ + NA+++ Y++ + EAR FES ER+++++ +L G+A E
Sbjct: 45 VFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCES 104
Query: 60 DARRVFDVMPEK-----------------------NVVSWNAMVGGLVRNGGLEGARM-- 94
+A +F M K NV + G LV+ G +G +
Sbjct: 105 EAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGN-DGTKFAV 163
Query: 95 ------------------VFEQTPCRTV--VSWNVMIAGYAENGAMDEARALF-DQMEFR 133
+F + V V+ N MIA Y G +D+A ++F E
Sbjct: 164 SSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELN 223
Query: 134 NVITWTSMISGYCRAGNVEAA 154
+ I+W ++I+GY + G E A
Sbjct: 224 DTISWNTLIAGYAQNGYEEEA 244
Score = 49.3 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 46 TAMLGGYADAGRVEDARRVFD--VMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTP-CR 102
++++ Y+ G+ ++ +F+ + + V+ NAM+ R G ++ A VF + P
Sbjct: 164 SSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELN 223
Query: 103 TVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITW 138
+SWN +IAGYA+NG +EA + ME N + W
Sbjct: 224 DTISWNTLIAGYAQNGYEEEALKMAVSME-ENGLKW 258
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 45/182 (24%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGY----------------- 52
N+ + ++M+ GY G + EA+ F+S+ E+N+V WTAM GY
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFI 384
Query: 53 ADAGRVEDARRVFDVM----------PEKNVVSWNAMVGGLV-------------RNGGL 89
A+ D+ + V+ P K + + G L+ + G +
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Query: 90 EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQME---FR-NVITWTSMISGY 145
E A +F+ + R V +N MIAG A +G ++ F+ M F+ + IT+ +++S
Sbjct: 445 EYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA- 503
Query: 146 CR 147
CR
Sbjct: 504 CR 505
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 8/153 (5%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ C +++ Y + +D AR F+ + E VV + AM+ GYA R +A +F M
Sbjct: 163 NVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ 222
Query: 70 EK----NVVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAENGAMD 121
K N ++ +++ G L+ + + + + C+ V +I +A+ G++D
Sbjct: 223 GKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLD 282
Query: 122 EARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+A ++F++M +++ W++MI Y G E +
Sbjct: 283 DAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKS 315
Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSW----TAMLGGYADAGRVEDARRVF 65
N +T ++LS G LD +W + + + + TA++ +A G ++DA +F
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 66 DVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMD 121
+ M K+ +W+AM+ +G E + ++FE+ V +++ ++ + G ++
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVE 348
Query: 122 EARALFDQMEFR-----NVITWTSMISGYCRAGNVEAAY 155
E R F QM + ++ + SM+ RAGN+E AY
Sbjct: 349 EGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAY 387
Score = 53.5 bits (127), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
+F+ M +++ +AM+ Y G +++ FE M NV +++ +L + GR
Sbjct: 287 IFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGR 346
Query: 58 VEDARRVFDVMPEK-----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR-TVVSWNVMI 111
VE+ R+ F M K ++ + +MV L R G LE A ++ P T + W +++
Sbjct: 347 VEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILL 406
Query: 112 AGYAENGAMDEARALFDQM 130
A + + +D A + +++
Sbjct: 407 AACSSHNNLDLAEKVSERI 425
Score = 47.0 bits (110), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGGYADAGR 57
LF+ M +IV N+M GY + E F + E ++ ++ ++L A A
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 58 VEDARRV----FDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQT--PCRTVVSWNVMI 111
+E+ R++ + + NV ++ ++ AR VF++ PC VV +N MI
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC--VVCYNAMI 202
Query: 112 AGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
GYA +EA +LF +M+ + N IT S++S G+++
Sbjct: 203 TGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD 247
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 43/181 (23%)
Query: 6 MPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF 65
M +N ++ N +++GY+++G L AR F+ MP+R + +W AM+ G E+ +F
Sbjct: 20 MRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLF 79
Query: 66 DVMP---------------------------------------EKNVVSWNAMVGGLVRN 86
M E ++V +++ +RN
Sbjct: 80 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 139
Query: 87 GGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMI 142
G L+ +V P R +V+WN +I G A+NG + L+ M+ N IT+ +++
Sbjct: 140 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 199
Query: 143 S 143
S
Sbjct: 200 S 200
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 39/171 (22%)
Query: 18 LSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWN 77
+S Y + G A + M ++N +S ++ GY AG + +AR+VFD MP++ + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 78 AMVGGLVR----NGGLEGAR---------------MVFEQTPCRTVVSWNVMIAGYA--- 115
AM+ GL++ GL R VF + VS I GY
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 116 -----------------ENGAMDEARALFDQMEFRNVITWTSMISGYCRAG 149
NG + + + M RN++ W ++I G + G
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG 171
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/234 (21%), Positives = 87/234 (37%), Gaps = 78/234 (33%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----------------------- 38
+FD MP R + T NAM++G +Q +E F M
Sbjct: 47 VFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRS 106
Query: 39 ----------------ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
E ++V +++ Y G+++D V MP +N+V+WN ++ G
Sbjct: 107 VSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMG 166
Query: 83 LVRNGGLEGARMVFEQ---TPCR-------TVVS-------------------------- 106
+NG E +++ + CR TV+S
Sbjct: 167 NAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSV 226
Query: 107 ---WNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ +I+ Y++ G + +A F + E + + W+SMIS Y G + A L
Sbjct: 227 VAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIEL 280
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 17 MLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDVMPEK- 71
++ G + G L+E FE+M + NV +T ++ GYA +G VEDA R+ M ++
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 72 ---NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR------TVVSWNVMIAGYAENGAMDE 122
+VV+++ +V GL +NG +E A F CR + ++ +I G + G +DE
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHT--CRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 123 ARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
A LF++M R+ + ++I + + V+ A L
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIAL 489
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGG-YADAGRVEDARRV 64
+IVT N M+ GY ++G +A M R + +++ M+ YAD+ +
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD-FGSCVAL 314
Query: 65 FDVMPEKNVV----SWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAE 116
+ M EK + +++ ++GGL + G L VFE + V + V+I GYA+
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 117 NGAMDEARALFDQM---EFR-NVITWTSMISGYCRAGNVEAA 154
+G++++A L +M F+ +V+T++ +++G C+ G VE A
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Score = 53.9 bits (128), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 86/162 (53%), Gaps = 17/162 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVF 65
++VT + +++G ++G ++EA +F + N + +++++ G AGRV++A R+F
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 66 DVMPEKNVVS----WNAMVGGLVRNGGLEGARMVF----EQTPC-RTVVSWNVMIAGYAE 116
+ M EK +NA++ ++ ++ A +F E+ C +TV ++ ++++G +
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 117 NGAMDEARALFDQMEFRNVI----TWTSMISGYCRAGNVEAA 154
+EA L+D M + + + ++ +G C +G V A
Sbjct: 516 EHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 51/198 (25%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVFD 66
+ NA++ + + GM++E W + M E + ++ ++ G A V+ A RVF+
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 67 VMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----------TVV------- 105
VM + ++V++N M+ G + G + A R T++
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 106 ----------------------SWNVMIAGYAENGAMDEARALFDQMEFR----NVITWT 139
+++++I G + G ++E +F+ M + NV +T
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 140 SMISGYCRAGNVEAAYGL 157
+I GY ++G+VE A L
Sbjct: 367 VLIDGYAKSGSVEDAIRL 384
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N++ + Y + G + + FE+M ER+VVSWT+++ Y G+ A F M V
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP 307
Query: 75 SWNAMVGGLVRNGGLEGARMVF-EQTPCR--------TVVSWNVMIAGYAENGAMDEARA 125
N + + +R+V+ EQ C ++ N M+ Y+ G + A
Sbjct: 308 P-NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV 366
Query: 126 LFDQMEFRNVITWTSMISGYCRAG 149
LF M R++I+W+++I GYC+AG
Sbjct: 367 LFQGMRCRDIISWSTIIGGYCQAG 390
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N+M+ Y G L A F+ M R+++SW+ ++GGY AG E+ + F M +
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTK 408
Query: 75 SWNAMVGGLVRNGG----LEGARMVFEQTPC----RTVVSWNVMIAGYAENGAMDEARAL 126
+ + L+ G +EG R V C + + +I Y++ G++ EA +
Sbjct: 409 PTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
F + + ++++ T+MI+GY G + A L
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHGKSKEAIDL 499
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKN-- 72
+++L Y + G +D++ F MP RN V+WTA++ G AGR ++ F M
Sbjct: 147 SSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL 206
Query: 73 ------VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARAL 126
++ A G G V + T+ N + Y E G M + L
Sbjct: 207 SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCL 266
Query: 127 FDQMEFRNVITWTSMISGYCRAGN 150
F+ M R+V++WTS+I Y R G
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQ 290
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM------ 68
N+ L + +G L AR F+ MP ++VSWT+++ Y A ++A +F M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 69 --PEKNVVSWNAMVGGLVRNGGLEGARMVF--EQTPCRTVVSWNVMIAGYAENGAMDEAR 124
P+ +V+S G N + + + + +V + ++ Y G +D++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 125 ALFDQMEFRNVITWTSMISGYCRAG 149
+F +M FRN +TWT++I+G AG
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAG 188
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 64.3 bits (155), Expect = 4e-11, Method: Composition-based stats.
Identities = 54/229 (23%), Positives = 91/229 (39%), Gaps = 73/229 (31%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM------P----------------- 38
LFD MP RN+++ M+S Y + + +A M P
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD 177
Query: 39 -------------ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVR 85
E +V +A++ +A G EDA VFD M + + WN+++GG +
Sbjct: 178 VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQ 237
Query: 86 NGGLEGARMVF----------EQTPCRTVVSW---------------------------N 108
N + A +F EQ +V+ N
Sbjct: 238 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNN 297
Query: 109 VMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
++ Y + G++++A +F+QM+ R+VITW++MISG + G + A L
Sbjct: 298 ALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N +++ Y++ +L++A F+ MP+RNV+SWT M+ Y+ + A + +M NV
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 75 SWNAMVGGLVRN-GGLEGARM----VFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
++R+ G+ RM + ++ V + +I +A+ G ++A ++FD+
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 130 MEFRNVITWTSMISGYCRAGNVEAAYGL 157
M + I W S+I G+ + + A L
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALEL 247
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAG----- 56
+FD M + + N+++ G+ Q+ D A F+ M ++ A L A
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 57 -RVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYA 115
+ V V +++++ NA+V + G LE A VF Q R V++W+ MI+G A
Sbjct: 276 LELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 116 ENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAY 155
+NG EA LF++M+ N IT ++ AG +E +
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGW 379
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFD 66
+ T N M+ + G ++ AR FE M R + V++ +M+ G+ GR++D F+
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 67 VMP----EKNVVSWNAMVGGLVRNG----GLEGARMVFEQTPCRTVVSWNVMIAGYAENG 118
M E +V+++NA++ + G GLE R + VVS++ ++ + + G
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 119 AMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
M +A + M N T+TS+I C+ GN+ A+ L
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Score = 56.2 bits (134), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRV 58
F V P +CN +L + + G D+ + FF+ M V ++ M+ G V
Sbjct: 221 FRVFPKTR--SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDV 278
Query: 59 EDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTP---CR-TVVSWNVM 110
E AR +F+ M + + V++N+M+ G + G L+ FE+ C V+++N +
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 111 IAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
I + + G + + +M+ NV+++++++ +C+ G ++ A
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 41/165 (24%)
Query: 2 LFDVM-PHRNIVT-----CNAMLSGYLQSGMLDEARWFFESMPERNVV----SWTAMLGG 51
+FDV+ RN+ +A+ S + GML+EA F M V S +L
Sbjct: 177 VFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
+A G+ +D +R F M+G GAR TV ++N+MI
Sbjct: 237 FAKLGKTDDVKRFF-----------KDMIGA--------GAR--------PTVFTYNIMI 269
Query: 112 AGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
+ G ++ AR LF++M+FR + +T+ SMI G+ + G ++
Sbjct: 270 DCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARM 94
E NVV++TA++ G DA R+++A +F M N+ S+NA++ G V+ ++ A
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 95 VFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQME----FRNVITWTSMISGYC 146
+ + R + + + I G ++ A+ + ++M+ N + +T+++ Y
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 147 RAGN 150
++GN
Sbjct: 554 KSGN 557
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
NIVT N++++G G+LDEA+ + + N V++ ++ GY A RV+D ++
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Query: 66 DVMPEKNV----VSWNAMVGGLVRNGGLEGARMVF-EQTPCRT---VVSWNVMIAGYAEN 117
VM V ++N + G + G A V C + ++N+++ G ++
Sbjct: 348 CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH 407
Query: 118 GAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
G + +A + ++ +IT+ +I G C+A VE A+ L
Sbjct: 408 GKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAML------GGYADAGRVE 59
N+V N ++ + G ++ A + M + +VV++ +++ G + + R+
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 60 DARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYA 115
+ P+ V++++A++ + G L A+ + + R+V V++N +I G
Sbjct: 243 SDMMRMGISPD--VITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 116 ENGAMDEARALFDQME----FRNVITWTSMISGYCRAGNVE 152
+G +DEA+ + + + F N +T+ ++I+GYC+A V+
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVD 341
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 63.5 bits (153), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
T N ++ G LDEA + M R+V+++ ++ G+ A + +A +FD M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 69 P----EKNVVSWNAMVGGLVRNGGLEGA-----RMVFE-QTPCRTVVSWNVMIAGYAENG 118
+N V++N ++ GL ++ +E A +M+ E Q P + ++N ++ + G
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK--YTYNSLLTHFCRGG 554
Query: 119 AMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+ +A + M +++T+ ++ISG C+AG VE A L
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 21/178 (11%)
Query: 1 MLFDVMPHRNIV----TCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGY 52
++ + MP +V T ++ GY++ G LD A E M E VS ++ G+
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 53 ADAGRVEDARRVFDVMPEKN-----VVSWNAMVGGLVRNG----GLEGARMVFEQTPCRT 103
GRVEDA M ++ ++N +V GL + G +E ++ ++
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 104 VVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
V ++N +I+G + G + EA + DQM R N +T+ ++IS C+ VE A L
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N VT N ++S + ++EA + + +V ++ +++ G A +F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTP----CRTVVSWNVMIAGYAEN 117
+ M K + ++N ++ L G L+ A + +Q R+V+++N +I G+ +
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 118 GAMDEARALFDQMEF----RNVITWTSMISGYCRAGNVEAAYGL 157
EA +FD+ME RN +T+ ++I G C++ VE A L
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ NA++ Y + G + +AR F+ +P ++ VSW +ML GY G + +A +F +M
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 70 EKNVVSWNAMVGG-LVRNGGLEGARMVFEQTPCRTVVSW-----NVMIAGYAENGAMDEA 123
+ + + L R + R + R + W N +I Y++ G + +A
Sbjct: 289 QNGIEPDKVAISSVLARVLSFKHGRQLHGWV-IRRGMEWELSVANALIVLYSKRGQLGQA 347
Query: 124 RALFDQMEFRNVITWTSMISGYCRAGN 150
+FDQM R+ ++W ++IS + + N
Sbjct: 348 CFIFDQMLERDTVSWNAIISAHSKNSN 374
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 42/198 (21%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM------PERNVVS----------- 44
+FD++PH++ V+ N+ML+GYL G+L EA F M P++ +S
Sbjct: 252 VFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKH 311
Query: 45 ------WT-------------AMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVR 85
W A++ Y+ G++ A +FD M E++ VSWNA++ +
Sbjct: 312 GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSK 371
Query: 86 NG-GLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVI-----TWT 139
N GL+ + +++ +++ A G +++ LF M I +
Sbjct: 372 NSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYA 431
Query: 140 SMISGYCRAGNVEAAYGL 157
M++ Y RAG +E AY +
Sbjct: 432 CMVNLYGRAGMMEEAYSM 449
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV--VSWTAMLGGYADAGRVEDARRVFDV 67
N+ + ++ Y G + A F+ M +R+ +W +++ GYA+ G+ EDA ++
Sbjct: 126 NLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ 185
Query: 68 MPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS---------WNVMIAGYAENG 118
M E V +++ G G+ + E R +V N ++ YA+ G
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIH-RDLVKEGFGYDVYVLNALVVMYAKCG 244
Query: 119 AMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ +AR +FD + ++ ++W SM++GY G + A
Sbjct: 245 DIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEA 280
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 5 VMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSW-----TAMLGGYADAGRVE 59
+ P +I+T ++LS G +D RW E + + W TA++ YA G +E
Sbjct: 302 IKPDGHILT--SVLSACASLGAVDHGRWVHEYILTAGI-KWDTHIGTAIVDMYAKCGYIE 358
Query: 60 DARRVFDVMPEKNVVSWNAMVGGLVRNG-GLEGARMVFEQTPC---RTVVSWNVMIAGYA 115
A +F+ + KNV +WNA++GGL +G GLE R E +V++ +
Sbjct: 359 TALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACC 418
Query: 116 ENGAMDEARALFDQME------FRNVITWTSMISGYCRAGNVEAAYGL 157
G +DE R F +M+ F + + MI CRAG ++ A L
Sbjct: 419 HTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALEL 466
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 8 HRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDV 67
+ +I N+++ Y G A F MP R+VVSWT ++ G+ G ++A F
Sbjct: 138 YDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSK 197
Query: 68 MP-EKNVVSW------NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
M E N+ ++ + VG L G+ G ++ ++ ++ + N +I Y + +
Sbjct: 198 MDVEPNLATYVCVLVSSGRVGCLSLGKGIHG--LILKRASLISLETGNALIDMYVKCEQL 255
Query: 121 DEARALFDQMEFRNVITWTSMISG 144
+A +F ++E ++ ++W SMISG
Sbjct: 256 SDAMRVFGELEKKDKVSWNSMISG 279
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 72/150 (48%), Gaps = 15/150 (10%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM---- 68
T NA++ Y++ L +A F + +++ VSW +M+ G R ++A +F +M
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSS 300
Query: 69 ---PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG-----YAENGAM 120
P+ ++++ +++ G ++ R V E + W+ I YA+ G +
Sbjct: 301 GIKPDGHILT--SVLSACASLGAVDHGRWVHEYI-LTAGIKWDTHIGTAIVDMYAKCGYI 357
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGN 150
+ A +F+ + +NV TW +++ G G+
Sbjct: 358 ETALEIFNGIRSKNVFTWNALLGGLAIHGH 387
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
IV A++ Y + G +D AR+ F+ +P +N++SW A++GGYA+ GR DA ++F+ M
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA 419
Query: 71 KNV----VSWNAMVGGLVRNGGLE-GARMVFEQTPCRTV----VSWNVMIAGYAENGAMD 121
NV V++ A++ +G E G + + + + + MI +G +D
Sbjct: 420 ANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLD 479
Query: 122 EARALFDQMEFRNVIT-WTSMISGYCR 147
EA A + + + W ++++ CR
Sbjct: 480 EAIAFIRRAPLKTTVNMWAALLNA-CR 505
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 44/183 (24%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA-------- 61
V+C ++ Y + G +++AR FE MPE+ V+W ++ GYA G E+A
Sbjct: 259 TFVSC-GLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMR 317
Query: 62 -------RRVFDVMP------------------------EKNVVSWNAMVGGLVRNGGLE 90
+ +M E +V+ A+V + G ++
Sbjct: 318 DSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVD 377
Query: 91 GARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYC 146
AR VF++ P + ++SWN ++ GYA +G +A LF++M NV +T+ +++S
Sbjct: 378 TARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
Query: 147 RAG 149
+G
Sbjct: 438 YSG 440
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFF----ESMPERNVVSWTAMLGGYADAGR 57
LFD +P RN+ + +++SG++ G EA F E + + ++ ML A G
Sbjct: 180 LFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGS 239
Query: 58 VEDARRVFDVMPEKNVVSWNAMVGGLV----RNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+ +++ + VV + GL+ + G +E AR FE P +T V+WN +IAG
Sbjct: 240 IYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAG 299
Query: 114 YAENGAMDEARALFDQM 130
YA +G +EA L M
Sbjct: 300 YALHGYSEEALCLLYDM 316
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
+FD +P +NI++ NA++ GY G +A FE M NV V++ A+L A +G
Sbjct: 382 VFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGL 441
Query: 58 VEDARRVFDVMPEKN-----VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS 106
E +F M E + + + M+ L R+G L+ A + P +T V+
Sbjct: 442 SEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVN 495
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP----EK 71
A ++ Y + G + +R FE+ R+VV W++M+ GYA+ G + + + M E
Sbjct: 292 AFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEA 351
Query: 72 NVVSWNAMVGGLVRNGGLEGARMVFEQT-PC---RTVVSWNVMIAGYAENGAMDEARALF 127
N V+ A+V + L A V Q C ++ N +I YA+ G++ AR +F
Sbjct: 352 NSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVF 411
Query: 128 DQMEFRNVITWTSMISGY 145
++ +++++W+SMI+ Y
Sbjct: 412 YELTEKDLVSWSSMINAY 429
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 19/162 (11%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRV 58
FD + + V +L GY SGM + A F+ MP ER V S+ A+L Y ++ ++
Sbjct: 116 FDDIKSEDFVIRIMLLYGY--SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKL 173
Query: 59 EDARRVFDVMPEK-----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNV 109
++A + F +PEK ++V++N M+ L R G ++ +FE+ ++S+N
Sbjct: 174 DEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNT 233
Query: 110 MIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCR 147
++ + E ++D M+ + N+ ++ S + G R
Sbjct: 234 LLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTR 275
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 21/172 (12%)
Query: 2 LFDVMPH----RNIVTCNAMLSGYLQSGMLDEARWFFESMPER-----NVVSWTAMLGGY 52
LFD MP R + + NA+LS Y+ S LDEA F+ +PE+ ++V++ M+
Sbjct: 144 LFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKAL 203
Query: 53 ADAGRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNG-GLEGAR---MVFEQTPCRTV 104
G ++D +F+ + E +++S+N ++ R +EG R ++ + +
Sbjct: 204 CRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNI 263
Query: 105 VSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
S+N + G N +A L D M+ +V T+ ++I+ Y N+E
Sbjct: 264 RSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 89/232 (38%), Gaps = 79/232 (34%)
Query: 2 LFDVMPHRNIVTCNAMLSGY------------LQSGM----LDEARWFFESMPE------ 39
+FD MPHRN+V+ NA+ S Y L + M + F S+ +
Sbjct: 154 VFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLE 213
Query: 40 ------------------RNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
NVV T++LG Y+ G +E ARR+FD + ++ V+WN M+
Sbjct: 214 DVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIV 273
Query: 82 GLVRNGGLEGARMVFEQ-----------------TPCRTVVSW----------------- 107
G ++N +E M F C + S+
Sbjct: 274 GSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA 333
Query: 108 -----NVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
N ++ Y G M EA +F ++ N+++W S+ISG G E A
Sbjct: 334 DLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQA 385
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA----RRVFDV-MP 69
NA+L Y G + EA + F + N+VSW +++ G ++ G E A RR+ + P
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPC----RTVVSWNVMIAGYAENGAMDEARA 125
+ +++A + +++ Q R+V +++ Y +N + A+
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458
Query: 126 LFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+FD M+ R+V+ WT MI G+ R GN E A
Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLGNSELA 487
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF-DV 67
R++ +LS Y ++ + A+ F+ M ER+VV WT M+ G++ G E A + F ++
Sbjct: 435 RSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Query: 68 MPEKNV---VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG-----YAENGA 119
EKN S ++++G L VF RT + + G Y +NG
Sbjct: 495 YREKNRSDGFSLSSVIGACSDMAMLRQGE-VFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+ A +F ++ W SM+ Y + G VE A
Sbjct: 554 YETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKA 588
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 63.2 bits (152), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 18 LSGYLQSGMLDEARWFFE-----SMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKN 72
L+ Q G L + +W E S E +V TA++ YA G +E A VF + +N
Sbjct: 225 LTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRN 284
Query: 73 VVSWNAMVGGLVRNGGLEGARMVFEQTPCR------TVVSWNVMIAGYAENGAMDEARAL 126
V SW A++GG G + A E+ +VV V+ A A G ++E R++
Sbjct: 285 VFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVL-AACAHGGFLEEGRSM 343
Query: 127 FDQMEFRNVIT-----WTSMISGYCRAGNVEAAYGL 157
+ ME R IT ++ ++ CRAG ++ A L
Sbjct: 344 LENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNL 379
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM----PEK 71
+L Y++ +L +AR F+ +P+ +VV W ++ GY G + VF M E
Sbjct: 157 GVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEP 216
Query: 72 NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG-----YAENGAMDEARAL 126
+ S + + G L + + E ++ + +V + YA+ G ++ A +
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAA 154
F ++ RNV +W ++I GY G + A
Sbjct: 277 FKKLTRRNVFSWAALIGGYAAYGYAKKA 304
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ A++ Y + G ++ A F+ + RNV SW A++GGYA G + A + +
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE 312
Query: 70 EKNVVSWNAMV-----GGLVRNGGLEGARMVFEQTPCRTVVS-----WNVMIAGYAENGA 119
++ + +++V G LE R + E R ++ ++ ++ G
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGR 372
Query: 120 MDEARALFDQMEFRNVIT-WTSMISGYCRA-GNVE 152
+D+A L ++M + + + W ++++G CR NVE
Sbjct: 373 LDDALNLIEKMPMKPLASVWGALLNG-CRTHKNVE 406
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 63.2 bits (152), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 41/157 (26%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM-----P 69
N ++ Y G LD AR F+ MPER++VSW +M+ G + A ++F M P
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP 249
Query: 70 E----KNVVSWNAMVGGL-----------------------VRN---------GGLEGAR 93
+ ++V+S A +G L V+N G L A
Sbjct: 250 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 309
Query: 94 MVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
VF+ R + SWN MI G+A +G +EA FD+M
Sbjct: 310 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Score = 59.7 bits (143), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 41/144 (28%)
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ------------- 98
Y G ++ AR+VFD MPE+++VSWN+M+ LVR G + A +F +
Sbjct: 196 YGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQ 255
Query: 99 ---TPCR-----TVVSW--------------------NVMIAGYAENGAMDEARALFDQM 130
+ C ++ +W N +I Y + G++ A +F M
Sbjct: 256 SVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGM 315
Query: 131 EFRNVITWTSMISGYCRAGNVEAA 154
+ R++ +W +MI G+ G E A
Sbjct: 316 QKRDLASWNAMILGFATHGRAEEA 339
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 12/158 (7%)
Query: 4 DVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARR 63
DV +++ N+++ Y + G L A F+ M +R++ SW AM+ G+A GR E+A
Sbjct: 282 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMN 341
Query: 64 VFDVMPEK------NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS-----WNVMIA 112
FD M +K N V++ ++ G + R F+ + + ++
Sbjct: 342 FFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVD 401
Query: 113 GYAENGAMDEARALFDQMEFR-NVITWTSMISGYCRAG 149
A G + EA + M + + + W S++ C+ G
Sbjct: 402 LIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 40/186 (21%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
RN VT ++L Y+ + + A F MP+R +W M+ G+A G++E +F M
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 69 PEK---------------------NVV-------------------SWNAMVGGLVRNGG 88
E NVV + N+++ + G
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 89 LEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVITWTSMISGYCRA 148
+ A E T VSWN +I + G ++A +F +N++TWT+MI+GY R
Sbjct: 256 RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRN 315
Query: 149 GNVEAA 154
G+ E A
Sbjct: 316 GDGEQA 321
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 46/200 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGR 57
+FD MP + V N ML+ Y + G+ EA F + + + S+TA+L A G
Sbjct: 26 VFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGN 85
Query: 58 VEDARRVFDV---------MP----------------------------EKNVVSWNAMV 80
V+ R++ + +P +N V+W +++
Sbjct: 86 VKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLL 145
Query: 81 GGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM---EFR-NVI 136
+ E A VF + P R +WN+MI+G+A G ++ +LF +M EF+ +
Sbjct: 146 FAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCY 205
Query: 137 TWTSMISGYCRAGNVEAAYG 156
T++S+++ C A + YG
Sbjct: 206 TFSSLMNA-CSADSSNVVYG 224
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N++LS Y + G D+A ES+ VSW +++ G E A VF + PEKN+V
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIV 303
Query: 75 SWNAMVGGLVRNGGLEGARMVF 96
+W M+ G RNG E A F
Sbjct: 304 TWTTMITGYGRNGDGEQALRFF 325
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 40/169 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER--------------------- 40
+F MP R N M+SG+ G L+ F+ M E
Sbjct: 160 VFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSS 219
Query: 41 NVV------------SWTA-------MLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
NVV W++ +L Y G +DA R + + VSWN+++
Sbjct: 220 NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIID 279
Query: 82 GLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM 130
++ G E A VF P + +V+W MI GY NG ++A F +M
Sbjct: 280 ACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM 328
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 43/184 (23%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK 71
V+ N+++ ++ G ++A F PE+N+V+WT M+ GY G E A R F M +
Sbjct: 272 VSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKS 331
Query: 72 NVVS---------------------------------------WNAMVGGLVRNGGLEGA 92
V S NA+V + G ++ A
Sbjct: 332 GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Query: 93 RMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRA 148
F + +VSWN M+ + +G D+A L+D M + +T+ +++ +
Sbjct: 392 DRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHS 451
Query: 149 GNVE 152
G VE
Sbjct: 452 GLVE 455
Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 14/156 (8%)
Query: 11 IVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF----- 65
+V + ++ +SG + AR F+ MPE + V+W ML Y+ G ++A +F
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 66 -DVMPEKNVVSWNAMVGGLVRNGGLEGAR----MVFEQTPCRTVVSWNVMIAGYAENGAM 120
D P+ S+ A++ G ++ R +V C ++ N +I Y +
Sbjct: 64 SDAKPDD--YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 121 DEARALFDQM--EFRNVITWTSMISGYCRAGNVEAA 154
A +F M + RN +TW S++ Y A EAA
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAA 157
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 62.8 bits (151), Expect = 9e-11, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 77/230 (33%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSW------------ 45
LFD +P ++V+CN M+SGY Q + +E+ FF M E N +S+
Sbjct: 106 LFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQA 165
Query: 46 -----------------------TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGG 82
+A++ ++ R EDA +VF NV WN ++ G
Sbjct: 166 PLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG 225
Query: 83 LVRNGGLEGARMVFE------QTP-----------CRT--------VVSWNVMIAG---- 113
+RN +F Q P C + VV V+ G
Sbjct: 226 ALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDV 285
Query: 114 ---------YAENGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
YA+ G M EA +F ++ +V++WT M+SGY ++ + +A
Sbjct: 286 FVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSA 335
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ ++LS Y SG + +A F+++P+ +VVS M+ GY E++ R F M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 70 ----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV--------VSWNVMIAGYAEN 117
E N +S+ +++ L+ A + E C T+ V + +I +++N
Sbjct: 143 FLGFEANEISYGSVISAC---SALQ-APLFSELVCCHTIKMGYFFYEVVESALIDVFSKN 198
Query: 118 GAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
++A +F NV W ++I+G R N A + L
Sbjct: 199 LRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Score = 50.4 bits (119), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
+A+++ Y + G L AR ++ +PE + VS ++++ GY+ G ++D +F M
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 75 SWNAMVGGLVRNGGLEGARMVFEQTP--------CRTVVSWNVMIAGYAENGAMDEARAL 126
+ + +++ L + Q C + ++ Y++ G++D+
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAA 154
F Q+ ++I WT++I+ Y + G A
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEA 737
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDA 61
++D +P + V+C++++SGY Q G++ + F M + + A + D
Sbjct: 608 VYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDE 667
Query: 62 RRV----------FDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
+ + E +V S +++ + G ++ F Q +++W +I
Sbjct: 668 SSLGAQVHAYITKIGLCTEPSVGS--SLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALI 725
Query: 112 AGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAY 155
A YA++G +EA +++ M+ + + +T+ ++S G VE +Y
Sbjct: 726 ASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY 773
Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ C A++ Y + G + EA F +P +VVSWT ML GY + A +F M
Sbjct: 284 DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR 343
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSW-------------NVMIAGYAE 116
V N V ++ G MV E + V +W +I+ Y++
Sbjct: 344 HSGVEINNCTVTSVISACGRPS--MVCEAS---QVHAWVFKSGFYLDSSVAAALISMYSK 398
Query: 117 NGAMDEARALF---DQMEFRNVITWTSMISGYCRA 148
+G +D + +F D ++ +N++ MI+ + ++
Sbjct: 399 SGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQS 431
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQ 98
ER + +A++ Y G +ED+ + FD MPEKN+V+ N+++GG G ++ A +FE+
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 99 T------PCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNVIT-----WTSMISGYCR 147
P +++ +++ + GA++ +FD M I ++ ++ R
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 148 AGNVEAAY 155
AG VE AY
Sbjct: 462 AGMVERAY 469
Score = 59.3 bits (142), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 12/120 (10%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM------PERNVVSWTAMLGGYADAG 56
FD MP +N+VT N+++ GY G +D A FE M P N +++ ++L + AG
Sbjct: 368 FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427
Query: 57 RVEDARRVFDVMP-----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS-WNVM 110
VE+ ++FD M E ++ +V L R G +E A ++ P + +S W +
Sbjct: 428 AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ CN ++ Y + + + F M +N VSW +++ Y E A ++ +
Sbjct: 243 DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY-LRS 301
Query: 70 EKNVVSWN-----AMVGGLVRNGGLEGARMVFEQT--PC--RTVVSWNVMIAGYAENGAM 120
K++V + +++ GLE R + C RT+ + ++ Y + G +
Sbjct: 302 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 121 DEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+++ FD+M +N++T S+I GY G V+ A L
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALAL 398
Score = 53.9 bits (128), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
R I +A++ Y + G ++++ F+ MPE+N+V+ +++GGYA G+V+ A +F+ M
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Query: 69 ------PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS-----WNVMIAGYAEN 117
P N +++ +++ R G +E +F+ + ++ ++
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462
Query: 118 GAMDEARALFDQMEFRNVITWTSMISGYCR 147
G ++ A +M + I+ + CR
Sbjct: 463 GMVERAYEFIKKMPIQPTISVWGALQNACR 492
Score = 49.7 bits (117), Expect = 9e-07, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF----DV 67
V C+A Y ++ + D+AR F+ +PERN+ +W A + GR +A F +
Sbjct: 145 VGCSA-FDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 68 MPEKNVVSW----NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEA 123
N +++ NA L N G++ +V V N +I Y + + +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 124 RALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+F +M +N ++W S+++ Y + E A
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 294
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 8 HRNIVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRVEDARR 63
H + VT ++S ++ +G++D AR M N +++ +L GY +++ A
Sbjct: 449 HPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAED 508
Query: 64 VFDVMPE-----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGY 114
+ M E +VVS+N ++ G + GA F + R T +S+ ++ +
Sbjct: 509 LLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAF 568
Query: 115 AENGAMDEARALFDQM--EFR---NVITWTSMISGYCRAGNVEAA 154
A +G A +FD+M + R ++I W ++ GYCR G +E A
Sbjct: 569 AMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDA 613
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++V N+MLS + ++ M D+A ES+ E ++V++ +++ Y G A +
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL 689
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGL-EGARMVFEQT-----PCRTVVSWNVMIAGYA 115
+ + ++VS+N ++ G R G + E RM+ E T PC + ++N ++GY
Sbjct: 690 KTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPC--IFTYNTFVSGYT 747
Query: 116 ENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
G E + + M N +T+ ++ GYCRAG A
Sbjct: 748 AMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 53.5 bits (127), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVFDVM 68
TC+ +LS + G+L EA+ FF + E V++ A+L + AG +A V M
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 342
Query: 69 PEKNV----VSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAM 120
E + V++N +V VR G + A V E + V +++ +I Y + G
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Query: 121 DEARALFDQME----FRNVITWTSMIS 143
DEA LF M+ N T+ +++S
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLS 429
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 13/125 (10%)
Query: 46 TAMLGGYADAGRVEDARRVFDVMPEK-----NVVSWNAMVGGLVRNGGLEGARMVFEQ-- 98
T++L G+ + DA +VFDVM ++ N VS++ ++ GL G LE A + +Q
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 99 -TPCR-TVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
C+ + ++ V+I + G +D+A LFD+M R NV T+T +I G CR G +E
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 153 AAYGL 157
A G+
Sbjct: 354 EANGV 358
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 17/159 (10%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPER-----NVVSWTAMLGGYADAGRVEDARRVFDVMPE 70
++L G+ + L +A F+ M + N VS++ ++ G + GR+E+A + D M E
Sbjct: 235 SLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGE 294
Query: 71 K----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCR----TVVSWNVMIAGYAENGAMDE 122
K + ++ ++ L G ++ A +F++ R V ++ V+I G +G ++E
Sbjct: 295 KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 123 ARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
A + +M F +VIT+ ++I+GYC+ G V A+ L
Sbjct: 355 ANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 56/212 (26%)
Query: 2 LFDVMPHR-----NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGY 52
+FDVM N V+ + ++ G + G L+EA + M E+ + ++T ++
Sbjct: 252 VFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311
Query: 53 ADAGRVEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGA----RMVFEQTPCRTV 104
D G ++ A +FD M + NV ++ ++ GL R+G +E A R + + +V
Sbjct: 312 CDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371
Query: 105 VSWNVMIAGYAENGAMDEARALFDQMEFR------------------------------- 133
+++N +I GY ++G + A L ME R
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Query: 134 --------NVITWTSMISGYCRAGNVEAAYGL 157
+++++ +I G CR G++ AY L
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDA---- 61
+++T NA+++GY + G + A M +R NV ++ ++ G G+ A
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429
Query: 62 RRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAEN 117
+R+ D ++VS+N ++ GL R G + A + C + +++ +I + +
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489
Query: 118 GAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAA 154
G D A A M + + +T T++I G C+ G A
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 6 MPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN----VVSWTAMLGGYADAGRVEDA 61
+P N +T N ML G+ + G+L++A+ FES+ E + + S+ L G G+ +A
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 62 RRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAG 113
V M +K ++ S+N ++ GL + G L A+ + C V++ ++ G
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHG 405
Query: 114 YAENGAMDEARALFDQMEFRNVI 136
Y G +D A++L +M N +
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCL 428
Score = 57.0 bits (136), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVE------DAR 62
T N ++ S +D AR F+ MPE+ N ++ ++ GY AG + +A
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 63 RVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTP----CRTVVSWNVMIAGYAENG 118
F V+P K V +N +V R G + + + E+ +V++N I+ + G
Sbjct: 209 ESFGVLPNK--VIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
Query: 119 AMDEARALFDQMEFR--------NVITWTSMISGYCRAGNVEAAYGL 157
+ +A +F ME N IT+ M+ G+C+ G +E A L
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 62.4 bits (150), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 73/140 (52%), Gaps = 10/140 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGR 57
+F M HR+IV+ N +++ L +G ++ +F+SM E + V+++ ++ +
Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEE 304
Query: 58 VEDARRVFDVM------PEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
+ + ++ PE +V N+++ + G E A VFE+ CR V+S N ++
Sbjct: 305 LTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAIL 364
Query: 112 AGYAENGAMDEARALFDQME 131
G+A NG +EA + +QM+
Sbjct: 365 NGFAANGMFEEAFGILNQMQ 384
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 7 PHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFD 66
P ++ N+++S Y + G + A FE + R+V+S A+L G+A G E+A + +
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILN 381
Query: 67 VM-------PE-KNVVSWNAMVGGLV--RNGGLEGARMVFEQTPCRTVVSWNVMIAGYAE 116
M P+ VVS ++ G L R G V + R + N +I Y +
Sbjct: 382 QMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 117 NGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
G +A LF R++++W SMIS + + G A L
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482
Score = 57.4 bits (137), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERN--------VVSWTAMLG--G 51
+F+ + R++++ NA+L+G+ +GM +EA M + VVS T++ G
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 52 YADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
++ GR V M + + N+++ + G A ++F+ T R +VSWN MI
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMI 467
Query: 112 AGYAENGAMDEARALFDQM 130
+ +++NG +A+ LF ++
Sbjct: 468 SAFSQNGFTHKAKNLFKEV 486
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 52/197 (26%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
N+ CN +LS + G DEA M R NVVS+ ++ G+ ++ AR VF
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 66 DVMPEK---------------------------------------NVVSWNAMVGGLVRN 86
+ EK N V + ++ GL +
Sbjct: 502 SNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKV 561
Query: 87 GGLEGAR-----MVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVIT 137
G AR M+ E+ C + +S+N +I G+ + G MD A A +++M NVIT
Sbjct: 562 GQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVIT 621
Query: 138 WTSMISGYCRAGNVEAA 154
+TS+++G C+ ++ A
Sbjct: 622 YTSLMNGLCKNNRMDQA 638
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 69/134 (51%), Gaps = 17/134 (12%)
Query: 39 ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEK-----NVVSWNAMVGGLVRNGGLEGAR 93
E N V + ++ G G+ AR + M E+ + +S+N+++ G + G ++ A
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAV 604
Query: 94 MVFEQ------TPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFR----NVITWTSMIS 143
+E+ +P V+++ ++ G +N MD+A + D+M+ + ++ + ++I
Sbjct: 605 AAYEEMCGNGISP--NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALID 662
Query: 144 GYCRAGNVEAAYGL 157
G+C+ N+E+A L
Sbjct: 663 GFCKRSNMESASAL 676
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 78/166 (46%), Gaps = 27/166 (16%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYADAGRVEDARRVF 65
N+V ++++G+ ++ L A F+ M P N V+++ ++ + G +E A +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 66 DVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQT---------PCRTVVSWNVMIA 112
M +V + ++ G ++ E A +F+++ C T++SW
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSW----- 452
Query: 113 GYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+ G DEA L +ME R NV+++ +++ G+CR N++ A
Sbjct: 453 -LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVV-----SWTAMLGGYADA 55
++FD + +V N+M+ GY ++G+ EA FF M E + S+T L A +
Sbjct: 54 VIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGS 113
Query: 56 GRVEDARRVFDVMP----EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMI 111
+ R+ D++ E +V A+V + L AR VF++ + VV+WN M+
Sbjct: 114 MDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMV 173
Query: 112 AGYAENGAMDEARALFDQM 130
+G A+NG A LF M
Sbjct: 174 SGLAQNGCSSAALLLFHDM 192
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 7 PHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFD 66
PH N +++ Y D +R F+S+ + VV W +M+ GY AG +A F
Sbjct: 35 PH------NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFG 88
Query: 67 VMPEKN---------VVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAEN 117
M E+ + A G + GL ++ E V ++ Y +
Sbjct: 89 YMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKA 148
Query: 118 GAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
+ AR +FD+M ++V+TW +M+SG + G AA L
Sbjct: 149 RDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLL 188
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF-DVM 68
++ +++S Y + G L+ A F ++ +R+VVSW+AM+ Y AG+ ++A +F D+M
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 69 P---EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVV--------SWNVMIAGYAEN 117
+ N V+ +++ G G+ +R+ + C + + +I+ YA+
Sbjct: 394 RIHIKPNAVTLTSVLQGC---AGVAASRL-GKSIHCYAIKADIESELETATAVISMYAKC 449
Query: 118 GAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAY 155
G A F+++ ++ + + ++ GY + G+ A+
Sbjct: 450 GRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAF 487
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 8/142 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM----PERNVVSWTAMLGGYAD--A 55
LF + R++V+ +AM++ Y Q+G DEA F M + N V+ T++L G A A
Sbjct: 357 LFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAA 416
Query: 56 GRVEDARRVFDVMP--EKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
R+ + + + E + + A++ + G A FE+ P + V++N + G
Sbjct: 417 SRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQG 476
Query: 114 YAENGAMDEARALFDQMEFRNV 135
Y + G ++A ++ M+ V
Sbjct: 477 YTQIGDANKAFDVYKNMKLHGV 498
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV- 73
+ ++ Y L A FE + ++ SW M+ YA G E+ +FD+M +V
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 74 ---------VSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEAR 124
+ A VG LV+ G+ +Q V +++ Y++ G ++ A
Sbjct: 298 MNKVAAASALQAAAYVGDLVK--GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAE 355
Query: 125 ALFDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
LF +E R+V++W++MI+ Y +AG + A L
Sbjct: 356 QLFINIEDRDVVSWSAMIASYEQAGQHDEAISL 388
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRV 64
++ V+ N M++GYL G +EA F M + N V++ ++ A+ + V
Sbjct: 567 KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSV 626
Query: 65 FDVMPEKNVVSW----NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAM 120
+ + S N++V + G +E + F + + +VSWN M++ YA +G
Sbjct: 627 HSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLA 686
Query: 121 DEARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
A +LF M+ + +++ S++S AG VE
Sbjct: 687 SCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVE 722
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 62.0 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 54/203 (26%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGR 57
+FD M +++VTC+A+L Y + G L+E M E N+VSW +L G+ +G
Sbjct: 173 VFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGY 232
Query: 58 VEDARRVF----------------DVMP-------------------------EKNVVSW 76
++A +F V+P +K V+S
Sbjct: 233 HKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVIS- 291
Query: 77 NAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFD-----QME 131
AM+ ++G + G +F Q N I G + NG +D+A +F+ ME
Sbjct: 292 -AMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 132 FRNVITWTSMISGYCRAG-NVEA 153
NV++WTS+I+G + G ++EA
Sbjct: 351 L-NVVSWTSIIAGCAQNGKDIEA 372
Score = 58.2 bits (139), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP----EK 71
+M Y++ G + +AR F+ M +++VV+ +A+L YA G +E+ R+ M E
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 72 NVVSWNAMVGGLVRNGGLEGARMVFEQTP----CRTVVSWNVMIAGYAENGAMDEARAL- 126
N+VSWN ++ G R+G + A ++F++ C V+ + ++ ++ ++ R +
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 127 ---FDQMEFRNVITWTSMISGYCRAGNVEAAYGL 157
Q ++ ++MI Y ++G+V YG+
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHV---YGI 306
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 47/195 (24%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGR 57
LF+ CNA ++G ++G++D+A FE E+ NVVSWT+++ G A G+
Sbjct: 309 LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 58 VEDARRVF----------------DVMPE-----------------------KNVVSWNA 78
+A +F ++P NV +A
Sbjct: 369 DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA 428
Query: 79 MVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ-MEFR---N 134
++ + G + +++VF P + +V WN ++ G++ +G E ++F+ M R +
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 135 VITWTSMISGYCRAG 149
I++TS++S + G
Sbjct: 489 FISFTSLLSACGQVG 503
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 41 NVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTP 100
NV +A++ YA GR+ ++ VF++MP KN+V WN+++ G +G + +FE
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESL- 480
Query: 101 CRT-----VVSWNVMIAGYAENGAMDEARALFDQMEFRNVIT-----WTSMISGYCRAGN 150
RT +S+ +++ + G DE F M I ++ M++ RAG
Sbjct: 481 MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGK 540
Query: 151 VEAAYGL 157
++ AY L
Sbjct: 541 LQEAYDL 547
Score = 53.1 bits (126), Expect = 7e-08, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 79/191 (41%), Gaps = 50/191 (26%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESM------PERNVVS------------------- 44
NIV+ N +LSG+ +SG EA F+ + P++ VS
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 45 --------------WTAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLE 90
+AM+ Y +G V +F+ NA + GL RNG ++
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 91 GARMVFE----QTPCRTVVSWNVMIAGYAENGAMDEARALFDQMEFRNV----ITWTSMI 142
A +FE QT VVSW +IAG A+NG EA LF +M+ V +T SM+
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 143 SGYCRAGNVEA 153
GN+ A
Sbjct: 396 PA---CGNIAA 403
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 8 HRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDV 67
H + C ++LS Y + GM+ EA F + ++ + W AM+ YA+ A +F
Sbjct: 304 HNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGF 363
Query: 68 MPEK----------NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAEN 117
M +K NV+S +++G + N G +F++ T + ++ Y++
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLG--LYNYGKSVHAELFKRPIQSTSTIESALLTLYSKC 421
Query: 118 GAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
G +A +F ME ++++ W S+ISG C+ G + A
Sbjct: 422 GCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF-DVMPEKNV 73
+A+L+ Y + G +A F+SM E+++V+W +++ G G+ ++A +VF D+ + +
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 74 VSWNAMVGGLVRN--GGLEGARMVFE--QTPCRTVVSWNVMIAG-----YAENGAMDEAR 124
+ ++ + V N GLE R + + +T + NV + Y++ G + A
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 125 ALFDQMEFRNVITWTSMISGYCR 147
+F M N++ W SMIS Y R
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSR 554
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 43/186 (23%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N+ ++++ Y + G+ + A F SM N+V+W +M+ Y+ E + +F++M
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 70 EKNVVS---------------------------------------WNAMVGGLVRNGGLE 90
+ + NA++ V+ G +
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 91 GARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM----EFRNVITWTSMISGYC 146
A +F++ +++++WN+MI GY +G A +LFD+M E + +T+ S+IS
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689
Query: 147 RAGNVE 152
+G VE
Sbjct: 690 HSGFVE 695
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 14/156 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
N ++++ YL+ G +D F+ + +++ V W ML GYA G ++ + F VM
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVM- 230
Query: 70 EKNVVSWNAMVGGLVRNGGLEGARMVFE---QTPCRTVVSW--------NVMIAGYAENG 118
+ +S NA+ V + + ++++ + Q VVS N +++ Y++ G
Sbjct: 231 RMDQISPNAVTFDCVLS--VCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 119 AMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
D+A LF M + +TW MISGY ++G +E +
Sbjct: 289 RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEES 324
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 16/147 (10%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV- 73
N++LS Y + G D+A F M + V+W M+ GY +G +E++ F M V
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 74 ---VSWNAMVGGLVRNGGLEGARMVFEQTPC---RTVVSWNV-----MIAGYAENGAMDE 122
+++++++ + + LE + Q C R +S ++ +I Y + +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCK----QIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM 393
Query: 123 ARALFDQMEFRNVITWTSMISGYCRAG 149
A+ +F Q +V+ +T+MISGY G
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNG 420
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
LF +M + VT N M+SGY+QSG+++E+ FF M V ++++++L +
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN 355
Query: 58 VEDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+E +++ + ++ +A++ + G+ A+ +F Q VV + MI+G
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415
Query: 114 YAENGAMDEARALF 127
Y NG ++ +F
Sbjct: 416 YLHNGLYIDSLEMF 429
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
+F+ + R+IV+ N+M++ QS A F M + VS +A L A+
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557
Query: 58 VEDARRVFDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG 113
+ + M + +V S + ++ + G L+ A VF+ + +VSWN +IA
Sbjct: 558 ESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAA 617
Query: 114 YAENGAMDEARALFDQMEFR-----NVITWTSMISGYCRAGNVE 152
+G + ++ LF +M + + IT+ +IS C G+V+
Sbjct: 618 CGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVD 661
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRVF 65
N VT N +++ + G++ +A E M +R +++ +LGG G +++A ++
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 66 DVM------PEKNVVSWNAMVGGLVRNGGLEGA----RMVFEQTPCRTVVSWNVMIAGYA 115
+M + +V+S+NA++ GL + L A ++ E+ V+ N+++
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470
Query: 116 ENGAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
+ G +++A L+ Q+ RN T+T+MI G+C+ G + A GL
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRVF 65
++VT ++ + ++G +DEA F + M E ++V +T+++ G+ D G ++ + +F
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 66 DVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEARA 125
D + E+ +PC +++N +I G+ + G + EA
Sbjct: 271 DEVLERG-------------------------DSPC--AITYNTLIRGFCKLGQLKEASE 303
Query: 126 LFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+F+ M R NV T+T +I G C G + A L
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 85/166 (51%), Gaps = 20/166 (12%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVF 65
++++ NA++ G + L +A ++ + E+ + V+ +L AG V A ++
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 66 DVMPEKNVV----SWNAMVGGLVRNGGLEGAR------MVFEQTPCRTVVSWNVMIAGYA 115
+ + +V ++ AM+ G + G L A+ V E P +V +N +++
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP--SVFDYNCLLSSLC 540
Query: 116 ENGAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
+ G++D+A LF++M+ F +V+++ MI G +AG++++A L
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDARRV 64
RN T AM+ G+ ++GML+ A+ M + +V + +L G ++ A R+
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 65 FDVMPEKN----VVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAE 116
F+ M N VVS+N M+ G ++ G ++ A + + +++ +I + +
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 117 NGAMDEARALFDQM 130
G +DEA + FD+M
Sbjct: 612 LGYLDEAISFFDKM 625
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 61.6 bits (148), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 12 VTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDV 67
V N + G ++EA + M +R +V+++T ++ GY G+V DA + D
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Query: 68 M----PEKNVVSWNAMVGGLVRNGGLEGARMVFEQT----PCRTVVSWNVMIAGYAENGA 119
M +++++N +V GL RNG E ++E+ P V+ +V+I G
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARK 508
Query: 120 MDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAY 155
+ EA F +E + S + GYC AG + AY
Sbjct: 509 VKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAY 544
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 16/169 (9%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESM-----PERNVVSWTAMLGGYADAG 56
+F+ +PH+++VT NA +SG +++G+++ F M E N V++ + A
Sbjct: 186 MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLL 245
Query: 57 RVEDARRVFDVMPEKNVVSWNAMVGGLV-----RNGGLEGARMVF-EQTPCRTVVSWNVM 110
++ R++ ++ +K + MVG + + + A +VF E R ++SWN +
Sbjct: 246 NLQYGRQLHGLVMKKEF-QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSV 304
Query: 111 IAGYAENGAMDEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAY 155
I+G NG + A LF++++ + TW S+ISG+ + G V A+
Sbjct: 305 ISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAF 353
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 13 TCNAMLSGYLQSGMLDEARWFFESMPERNVVS----WTAMLGGYADAGRVEDAR----RV 64
T N+++SG+ Q G + EA FFE M +V T++L +D +++ + V
Sbjct: 335 TWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHV 394
Query: 65 FDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFE--QTPCRTVVSWNVMIAGYAENGAMDE 122
E+++ +++ ++ G AR +F+ + + V WNVMI+GY ++G +
Sbjct: 395 IKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECES 454
Query: 123 ARALFDQMEFRNV----ITWTSMISGYCRAGNVE 152
A +F+ + V T+T+++S GNVE
Sbjct: 455 AIEIFELLREEKVEPSLATFTAVLSACSHCGNVE 488
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFF----ESMPERNVVSWTAMLGGYAD-AG 56
+ D MP R I + NA +SG L++G +A F S N V+ ++LGG D G
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG 147
Query: 57 RVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAGYAE 116
++ E V ++V R G A +FE+ P ++VV++N I+G E
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 117 NGAMDEARALFDQM-----EFRNVITWTSMISGYCRAGNVEAAYG 156
NG M+ ++F+ M E N +T+ + I+ N++ YG
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQ--YG 250
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 9 RNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGRVEDARRV 64
RN+++ N+++SG + +G + A FE + + +W +++ G++ G+V +A +
Sbjct: 296 RNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKF 355
Query: 65 FDVMPEKNVVSWNAMVGGLVR--------NGGLEGARMVFEQTPCRTVVSWNVMIAGYAE 116
F+ M +V + L+ G E V + R + +I Y +
Sbjct: 356 FERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMK 415
Query: 117 NGAMDEARALFDQMEFR--NVITWTSMISGYCRAGNVEAA 154
G AR +FD+ E + + + W MISGY + G E+A
Sbjct: 416 CGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESA 455
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNV- 73
NA++S Y ++G +++A FE +N++SW A++ G+ G + F + E V
Sbjct: 425 NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR 484
Query: 74 -----VSWNAMVGGLVRNGGL----EGARMVFEQTPCRTVVSWNVMIAGYAENGAMDEAR 124
+ + ++ V L + V + + N +I Y++ G + +
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 125 ALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
+F+QM ++V++W S+IS Y R G E A
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENA 574
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
N +LS Y + G L + F+ + E +V SWT +L G +E A VFD MPE++ V
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDV 155
Query: 75 S-WNAMVGGLVRNGGLEGARMVFEQ 98
+ WNAM+ G +G E + +F +
Sbjct: 156 AIWNAMITGCKESGYHETSVELFRE 180
Score = 51.2 bits (121), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 91/208 (43%), Gaps = 51/208 (24%)
Query: 1 MLFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----------------VS 44
+LF+ +N+++ NA++SG+ +G E F + E V VS
Sbjct: 442 LLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVS 501
Query: 45 WTAMLGG-------------------------YADAGRVEDARRVFDVMPEKNVVSWNAM 79
++++ G Y+ G ++++ VF+ M EK+VVSWN++
Sbjct: 502 TSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSL 561
Query: 80 VGGLVRNGGLEGA-----RMVFEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQM-EF- 132
+ R+G E A M E +++ +++ + G ++E +F+ M EF
Sbjct: 562 ISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFH 621
Query: 133 ---RNVITWTSMISGYCRAGNVEAAYGL 157
RNV ++ ++ RAG+++ A L
Sbjct: 622 GVIRNVDHFSCLVDLLGRAGHLDEAESL 649
Score = 50.8 bits (120), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKNVV 74
NA ++ Y A FES+ E+++V+W M+ Y A + A V+ M V
Sbjct: 327 NATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVK 386
Query: 75 SWNAMVGGLVRNG-GLEGARMV----FEQTPCRTVVSWNVMIAGYAENGAMDEARALFDQ 129
G L+ L+ MV + + N +I+ Y++NG +++A LF++
Sbjct: 387 PDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFER 446
Query: 130 MEFRNVITWTSMISGYCRAG 149
+N+I+W ++ISG+ G
Sbjct: 447 SLRKNLISWNAIISGFYHNG 466
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 48 MLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVS- 106
+L Y G + ++ FD + E +V SW ++ + G +E A VF++ P R V+
Sbjct: 98 LLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAI 157
Query: 107 WNVMIAGYAENGAMDEARALFDQM 130
WN MI G E+G + + LF +M
Sbjct: 158 WNAMITGCKESGYHETSVELFREM 181
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRVEDARRVF 65
N+ TC +++GY + G ++EA FF M E N+ + +++ G+ + ++ V
Sbjct: 530 NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 589
Query: 66 DVMPE----KNVVSWNAMVGGLVRNGGLEGARMVF----EQTPCRTVVSWNVMIAGYAEN 117
D+M E +VV+++ ++ G ++ ++ E + +++++ GYA
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARA 649
Query: 118 GAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAA 154
G ++A + +QM NV+ +T +ISG+C AG ++ A
Sbjct: 650 GEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA 690
Score = 50.1 bits (118), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 15 NAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRVEDARRVFDV--- 67
NA+++ +SG LD+A FE M E ++ ++ GY G++E++ R+ D+
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 452
Query: 68 --MPEKNVVSWNAMVGGLVRNGGLEGA-RMVFEQTPCRT---VVSWNVMIAGYAENGAMD 121
M + N + N +V +E A +V++ VV++N + YA G+
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTC 512
Query: 122 EA------RALFDQMEFRNVITWTSMISGYCRAGNVEAA 154
A R L ++++ NV T ++++GYC G +E A
Sbjct: 513 TAEDMIIPRMLHNKVK-PNVRTCGTIVNGYCEEGKMEEA 550
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 18 LSGYLQSGMLDEARWFFESMP-----ERNVVSWTAMLGGYADAGRVEDARRVFDVMPEKN 72
L+ Q G L + +W E + E +V TA++ YA G +E A VF+ + +N
Sbjct: 225 LTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRN 284
Query: 73 VVSWNAMVGGLVRNGGLEGARMVFEQTPCR------TVVSWNVMIAGYAENGAMDEARAL 126
V SW A++GG G + A ++ +VV V+ A A G ++E R +
Sbjct: 285 VFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVL-AACAHGGFLEEGRTM 343
Query: 127 FDQMEFRNVIT-----WTSMISGYCRAGNVEAAYGL 157
+ ME R IT ++ ++ CRAG ++ A L
Sbjct: 344 LENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDL 379
Score = 60.1 bits (144), Expect = 6e-10, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 24/180 (13%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNV----VSWTAMLGGYADAGR 57
+FD +P ++V + +++GY++ G+ E F+ M R + S T L A G
Sbjct: 174 VFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGA 233
Query: 58 VEDARRVFDVMPEKNVVSWNAMVGGLV-----RNGGLEGARMVFEQTPCRTVVSWNVMIA 112
+ + + + + +K + + VG + + G +E A VFE+ R V SW +I
Sbjct: 234 LAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIG 293
Query: 113 GYAENGAMDEARALFDQMEFRNVITWTSMI----------SGYCRAG-----NVEAAYGL 157
GYA G +A D++E + I S++ G+ G N+EA YG+
Sbjct: 294 GYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGI 353
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 16 AMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVM----PEK 71
+L Y++ +L +AR F+ +P+ +VV W ++ GY G + VF M E
Sbjct: 157 GVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEP 216
Query: 72 NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTVVSWNVMIAG-----YAENGAMDEARAL 126
+ S + + G L + + E + + +V + YA+ G ++ A +
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 127 FDQMEFRNVITWTSMISGYCRAGNVEAA 154
F+++ RNV +W ++I GY G + A
Sbjct: 277 FEKLTRRNVFSWAALIGGYAAYGYAKKA 304
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++ A++ Y + G ++ A FE + RNV SW A++GGYA G + A D +
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
Query: 70 EKNVVSWNAMV-----GGLVRNGGLEGARMVFEQTPCRTVVS-----WNVMIAGYAENGA 119
++ + +++V G LE R + E R ++ ++ ++ G
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGR 372
Query: 120 MDEARALFDQMEFRNVIT-WTSMISGYCRA-GNVE 152
+D+A L ++M + + + W ++++G CR NVE
Sbjct: 373 LDDALDLIEKMPMKPLASVWGALLNG-CRTHKNVE 406
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 16/162 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVF-DVM 68
+I +A++ Y G L++AR F+ +P+RN+VSWT+M+ GY G DA +F D++
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169
Query: 69 PEKN------------VVSWNAMVGGLVRNGGLEGAR-MVFEQTPCRTVVSWNVMIAGYA 115
++N +VS + + G E V ++ R V N ++ YA
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229
Query: 116 E--NGAMDEARALFDQMEFRNVITWTSMISGYCRAGNVEAAY 155
+ G + AR +FDQ+ ++ +++ S++S Y ++G A+
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Score = 53.5 bits (127), Expect = 6e-08, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 49/205 (23%)
Query: 2 LFDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSW---------------- 45
+FD + ++ V+ N+++S Y QSGM +EA F + + VV++
Sbjct: 242 IFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301
Query: 46 ------------------------TAMLGGYADAGRVEDARRVFDVMPEKNVVSWNAMVG 81
T+++ Y GRVE AR+ FD M KNV SW AM+
Sbjct: 302 ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIA 361
Query: 82 GLVRNGGLEGARMVFEQTPCRTV----VSWNVMIAGYAENGAMDEARALFDQMEFRNVIT 137
G +G A +F V +++ ++A + G E F+ M+ R +
Sbjct: 362 GYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVE 421
Query: 138 -----WTSMISGYCRAGNVEAAYGL 157
+ M+ RAG ++ AY L
Sbjct: 422 PGLEHYGCMVDLLGRAGFLQKAYDL 446
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPER----NVVSWTAMLGGYADAGRV 58
F + P NI TCN ++ + ++ A + +P N+V++T +LGGY G +
Sbjct: 185 FGITP--NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 59 EDARRVFDVMPEK----NVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVM 110
E A+RV + M ++ + ++ ++ G + G A V + + V++ VM
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 111 IAGYAENGAMDEARALFDQMEFRNVITWTSM----ISGYCRAGNVEAAYGL 157
I + EAR +FD+M R+ + +S+ I C V+ A GL
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGL 353
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADA----GRVEDARRVF 65
N VT M+ + EAR F+ M ER+ + +++ DA +V++A ++
Sbjct: 295 NEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLW 354
Query: 66 DVMPEKNVVSWNAMVGGLV----RNGGLEGARMVF---EQTPCRTVVSWNVMIAGYAENG 118
M + N + NA++ L+ + G + AR +F E+ +++++N +IAG E G
Sbjct: 355 RKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKG 414
Query: 119 AMDEARALFDQMEFR----NVITWTSMISGYCRAGNVE 152
+ EA L+D M R N T+ +I G + GNV+
Sbjct: 415 ELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVK 452
Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 2 LFDVMPHRNIVT----CNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGY----A 53
+FD M R+ + C ++ + +DEA + M + N + A+L
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
Query: 54 DAGRVEDARRVFDVMPEKNV---VSWNAMVGGLVRNGGL-EGARM---VFEQTPCRTVVS 106
GRV +AR++FD + ++ +++N ++ G+ G L E R+ ++E+ +
Sbjct: 378 KEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFT 437
Query: 107 WNVMIAGYAENGAMDEA-RALFDQME---FRNVITWTSMISGYCRAGNVEAA 154
+NV+I G ++NG + E R L + +E F N T+ + G + G E A
Sbjct: 438 YNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 60.8 bits (146), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRVEDARRVF 65
N+VT ++ GY ++G L+ A ++ M NVV++TA++ G+ G ++ A ++
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256
Query: 66 DVMPEK----NVVSWNAMVGGLVRNGGLEGAR----MVFEQTPCRTVVSWNVMIAGYAEN 117
M E N + + ++ G + G + A + Q + ++ V+I+G N
Sbjct: 257 SRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGN 316
Query: 118 GAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAAYGL 157
G + EA + + ME +++ +T+M++ Y ++G ++AA +
Sbjct: 317 GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Score = 55.1 bits (131), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 84/163 (51%), Gaps = 18/163 (11%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMP-------ERNVVSWTAMLGGYADAGRVEDAR 62
++++ N+++ G+ ++G + A ES+ + ++VS+ ++ G++ +++
Sbjct: 90 DVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF 149
Query: 63 RVFDVMPE---KNVVSWNAMVGGLVRNGGLEGARMVFEQTP----CRTVVSWNVMIAGYA 115
VM + NVV+++ + ++G L+ A F VV++ +I GY
Sbjct: 150 VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC 209
Query: 116 ENGAMDEARALFDQME----FRNVITWTSMISGYCRAGNVEAA 154
+ G ++ A +L+ +M NV+T+T++I G+C+ G ++ A
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRA 252
Score = 54.7 bits (130), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 7 PHRNIVTCNAMLSGYLQSGMLDEARWFFESMP----ERNVVSWTAMLGGYADAGRVEDAR 62
PHR+ + N+++S + G + A SMP E +V+S+ +++ G+ G + A
Sbjct: 54 PHRS--SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS 111
Query: 63 RVFDVMP-------EKNVVSWNAMVGGLVRNGGLEGARM---VFEQTPCRTVVSWNVMIA 112
V + + + ++VS+N++ G + L+ + V + VV+++ I
Sbjct: 112 LVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWID 171
Query: 113 GYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAAYGL 157
+ ++G + A F M+ NV+T+T +I GYC+AG++E A L
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 10 NIVTCNAMLSGYLQSGMLDEARWFFESMPERNVVSWTAMLGGYADAGRVEDARRVFDVMP 69
++V + M+ G ++G L EA +F + + N V +T ++ G + R+F +
Sbjct: 372 DVVALSTMIDGIAKNGQLHEAIVYF-CIEKANDVMYTVLIDALCKEGDFIEVERLFSKIS 430
Query: 70 EKNVVS----WNAMVGGLVRNGGLEGA-----RMVFEQTPCRTVVSWNVMIAGYAENGAM 120
E +V + + + GL + G L A RMV ++ ++++ +I G A G M
Sbjct: 431 EAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV-QEGLLLDLLAYTTLIYGLASKGLM 489
Query: 121 DEARALFDQMEFRNV----ITWTSMISGYCRAGNVEAAYGL 157
EAR +FD+M + + +I Y + GN+ AA L
Sbjct: 490 VEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDL 530
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 3 FDVMPHRNIVTCNAMLSGYLQSGMLDEARWFFESMPE----RNVVSWTAMLGGYADAGRV 58
FD + R I + N +++ + +G L++A+ FF+ + N VS+ ++ G+ D
Sbjct: 145 FDCV--RTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDW 202
Query: 59 EDARRVFDVMPE----KNVVSWNAMVGGLVRNGGLEGARMVFEQTPCRTV----VSWNVM 110
E A +VFD M E +VV++N+++G L RN + A+ + E + + V++ ++
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 111 IAGYAENGAMDEARALFDQMEFR----NVITWTSMISGYCRAGNVEAA 154
+ G G +EA+ L ME+R ++ + ++S + G ++ A
Sbjct: 263 MKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA 310