Miyakogusa Predicted Gene
- Lj0g3v0322659.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0322659.1 Non Chatacterized Hit- tr|I1KVG3|I1KVG3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,26.85,1e-18,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT ,CUFF.21898.1
(391 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 431 e-121
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 7e-81
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 1e-80
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 4e-76
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 3e-74
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 274 9e-74
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 9e-74
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 267 1e-71
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 265 3e-71
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 8e-71
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 1e-70
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 1e-70
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 3e-70
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 3e-70
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 258 3e-69
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 6e-69
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 9e-68
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 1e-67
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 3e-67
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 6e-67
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 1e-66
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 248 5e-66
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 1e-65
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 245 3e-65
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 3e-65
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 245 3e-65
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 9e-65
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 243 1e-64
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 2e-64
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 242 3e-64
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 242 4e-64
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 8e-64
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 4e-63
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 238 5e-63
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 6e-63
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 9e-63
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 235 4e-62
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 235 5e-62
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 234 6e-62
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 7e-62
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 9e-62
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 234 1e-61
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 233 2e-61
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 2e-61
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 3e-61
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 3e-61
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 3e-61
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 8e-61
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 8e-61
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 9e-60
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 1e-59
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 226 2e-59
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 225 3e-59
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 4e-59
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 225 5e-59
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 6e-59
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 6e-59
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 224 9e-59
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 1e-58
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 223 2e-58
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 223 2e-58
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 223 2e-58
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 3e-58
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 4e-58
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 4e-58
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 6e-58
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 8e-58
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 220 1e-57
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 1e-57
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 220 1e-57
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 3e-57
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 218 5e-57
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 217 1e-56
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 215 3e-56
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 4e-56
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 9e-56
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 1e-55
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 212 3e-55
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 212 4e-55
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 4e-55
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 5e-55
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 5e-55
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 211 6e-55
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 1e-54
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 210 1e-54
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 4e-54
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 6e-54
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 206 2e-53
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 7e-53
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 203 2e-52
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 203 2e-52
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 201 5e-52
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 8e-52
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 1e-51
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 1e-51
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 1e-51
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 199 2e-51
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 4e-51
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 2e-50
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 2e-50
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 2e-50
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 196 2e-50
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 3e-50
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 5e-50
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 9e-50
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 193 1e-49
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 1e-49
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 1e-49
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 5e-49
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 9e-49
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 7e-48
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 183 1e-46
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 182 4e-46
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 7e-46
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 1e-45
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 8e-45
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 9e-45
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 172 3e-43
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 2e-42
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 5e-42
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 6e-39
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 3e-38
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 5e-35
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 4e-33
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 2e-30
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 6e-27
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 107 1e-23
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 9e-22
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 92 8e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 2e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 2e-18
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 88 1e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 88 1e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 87 2e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 3e-17
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 84 2e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 80 2e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 5e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 79 5e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 79 7e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 77 2e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 4e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 4e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 4e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 69 7e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 8e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 67 2e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 67 2e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 2e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 67 2e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 65 1e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 64 1e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 61 1e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 3e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 3e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 58 9e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/397 (53%), Positives = 283/397 (71%), Gaps = 9/397 (2%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVP-IRNKIAWT 59
MY+ GL+ A + L +FD QS N +IN Y++ G LE+A+ LF+ V + +K++WT
Sbjct: 348 MYASSGLIASAQSLLN---ESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWT 404
Query: 60 CMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
MI GYL AG V +A LF + D+D + WT MISG VQNEL AEA SL +M+ G P
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI--YEYDLILENSLVSMYAKCGEIDDSYR 177
LN T++VL + G+ + LDQG+ +H + KT Y+ DLIL+NSLVSMYAKCG I+D+Y
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
IF+ M +D +SWNSMIMGLS HG A +AL +++ ML+ G P++VTFLGVL+AC+H+GL
Sbjct: 525 IFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGL 584
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +G ELF +M +Y +QPG DHYIS+I+LLGRAGK+K+AEEF+ LP P+H ++GAL+
Sbjct: 585 ITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALL 644
Query: 298 GVCGLSKTDAD---VASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIK 354
G+CGL+ D D +A RA RLLELDP+NAPGHVALCN+YA RH +RKEM IK
Sbjct: 645 GLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIK 704
Query: 355 GVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
GV+K PGCSW++V GR +VF SGD+ ++L I
Sbjct: 705 GVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPI 741
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 163/385 (42%), Gaps = 75/385 (19%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D S N+MI GY++ +E+A+ LF + +N + WT M+ GY G V +A LF MP
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMM--AHGFSPLNGTFAVLFGAMG--SVAYLD 138
+R+ ++WT+MISG+ NEL EA+ LF EM SP T L A G V +
Sbjct: 259 ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 139 QGRQLHGMQVKTIYE---YDLILENSLVSMYA---------------------------- 167
G QLH + +E +D L SLV MYA
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRY 378
Query: 168 -KCGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHGRASEALTVYET------------- 212
K G+++ + +F + + DK+SW SMI G + G S A +++
Sbjct: 379 LKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMI 438
Query: 213 ------------------MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
M+ GL P T+ +L++ +D+G + + +
Sbjct: 439 SGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTAC 498
Query: 255 -QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD-ADVASR 312
P S++++ + G ++DA E ++ V+ + W ++ + GLS AD A
Sbjct: 499 YDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSM--IMGLSHHGLADKALN 555
Query: 313 ATKRLLELDPLNAPGHVALCNIYAA 337
K + LD P V + +A
Sbjct: 556 LFKEM--LDSGKKPNSVTFLGVLSA 578
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
+ N+M+ GYV+ ++ +A LF +P +N ++WT M++ G+ A +LFD MP+R+
Sbjct: 110 TCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERN 168
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
++W ++++G ++N + +A +F M + N G +++ + L G
Sbjct: 169 VVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDG----MEEAKLLFG 224
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+ E +++ S+V Y + G++ ++YR+F M R+ +SW +MI G + + E
Sbjct: 225 ----DMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYRE 280
Query: 206 ALTVYETMLE--FGLYPDTVTFLGVLTACA-------------HAGLVDKGWE------- 243
AL ++ M + + P+ T + + AC HA ++ GWE
Sbjct: 281 ALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGR 340
Query: 244 LFNSMVNSYG-----------LQPGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNH 290
L S+V+ Y L FD IIN + G ++ AE R+ +
Sbjct: 341 LAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDK 400
Query: 291 AIWGALV 297
W +++
Sbjct: 401 VSWTSMI 407
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 19/225 (8%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIA----WTCMISGYLSAGQVFKACDLFDSMPDR 84
++I + G L A+ L D +P R I WT ++S Y G + +A LF+ MP+R
Sbjct: 47 ALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 106
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
+ + +M++GYV+ + EA +LF EM + S + V+ A+ D GR
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS-----WTVMLTAL-----CDDGRSED 156
Query: 145 GMQV-KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
+++ + E +++ N+LV+ + G+++ + ++F M RD +SWN+MI G ++
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGM 216
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
EA ++ M E + VT+ ++ G V + + LF M
Sbjct: 217 EEAKLLFGDMSE----KNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 305 bits (780), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 149/366 (40%), Positives = 221/366 (60%), Gaps = 1/366 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
++ S N+M+ GYVQ ++E A+ELFD +P RN W MI+GY G++ +A +LFD MP
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
RD ++W +MI+GY Q+ EA+ LF +M G +F+ V L+ G+Q
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
LHG VK YE + N+L+ MY KCG I+++ +F MA +D +SWN+MI G S HG
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGF 490
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
AL +E+M GL PD T + VL+AC+H GLVDKG + F +M YG+ P HY
Sbjct: 491 GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYA 550
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+++LLGRAG ++DA + +P EP+ AIWG L+G + + ++A A ++ ++P
Sbjct: 551 CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH-GNTELAETAADKIFAMEP 609
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
N+ +V L N+YA++ R ++ LR MR KGV+K PG SWI ++ + H FS GD P
Sbjct: 610 ENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHP 669
Query: 383 HVEDIL 388
++I
Sbjct: 670 EKDEIF 675
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 117/224 (52%), Gaps = 14/224 (6%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N MI+GY++ G+ E A++LFD +P R+ ++W MI GY+ + KA +LF+ MP+RD
Sbjct: 97 SYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERD 156
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+W +M+SGY QN + +A S+F M N + AY+ +
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLS---------AYVQNSKMEEA 207
Query: 146 -MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
M K+ + L+ N L+ + K +I ++ + F +M RD +SWN++I G + G+
Sbjct: 208 CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKID 267
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
EA +++ D T+ +++ +V++ ELF+ M
Sbjct: 268 EARQLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 18/276 (6%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D + N I+ Y++ G+ +A +F +P + +++ MISGYL G+ A LFD MP
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+RD ++W MI GYV+N + +A LF M N + +D R
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWN----TMLSGYAQNGCVDDARS 178
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+ + E + + N+L+S Y + +++++ +F + +SWN ++ G +
Sbjct: 179 V----FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
EA +++M D V++ ++T A +G +D+ +LF+ +Q F +
Sbjct: 235 IVEARQFFDSM----NVRDVVSWNTIITGYAQSGKIDEARQLFDES----PVQDVFT-WT 285
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++++ + V++A E ++P E N W A++
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLA 320
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR- 141
D D W IS Y++ EA+ +F M NG + YL G
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMIS---------GYLRNGEF 111
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+L + E DL+ N ++ Y + + + +F M RD SWN+M+ G + +G
Sbjct: 112 ELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
+A +V++ M E + V++ +L+A +++ LF S N
Sbjct: 172 CVDDARSVFDRMPE----KNDVSWNALLSAYVQNSKMEEACMLFKSREN 216
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 297 bits (761), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 227/366 (62%), Gaps = 2/366 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
++ S N+MI+GY++ G LEKA F P+R +AWT MI+GY+ A +V A +F M
Sbjct: 185 NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMT 244
Query: 83 -DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+++ + W +MISGYV+N + + LF M+ G P + + ++ L GR
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+H + K+ D+ SL+SMY KCGE+ D++++F M +D ++WN+MI G + HG
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A +AL ++ M++ + PD +TF+ VL AC HAGLV+ G F SMV Y ++P DHY
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++LLGRAGK+++A + + +P P+ A++G L+G C + K + ++A A ++LL+L+
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHK-NVELAEFAAEKLLQLN 483
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
NA G+V L NIYA+ +R ++ +RK M+ V K PG SWI ++ +VH F S DR+
Sbjct: 484 SQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIH 543
Query: 382 PHVEDI 387
P ++ I
Sbjct: 544 PELDSI 549
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 124/254 (48%), Gaps = 11/254 (4%)
Query: 26 SLNSMINGYVQ-AGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 84
+ NS++ G + ++ +A +LFD +P + ++ M+S Y+ KA FD MP +
Sbjct: 94 TWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK 153
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D+ +W +MI+GY + + +A LF MM N + G + D + H
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMIS------GYIECGDLEKASH 207
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY-RDKISWNSMIMGLSDHGRA 203
+V + ++ ++++ Y K +++ + +F +M ++ ++WN+MI G ++ R
Sbjct: 208 FFKVAPV--RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRP 265
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+ L ++ MLE G+ P++ L C+ + G ++ + +V+ L S
Sbjct: 266 EDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI-HQIVSKSTLCNDVTALTS 324
Query: 264 IINLLGRAGKVKDA 277
+I++ + G++ DA
Sbjct: 325 LISMYCKCGELGDA 338
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS-DHGRASEALTVYETMLEFGL 218
N +++ + G+ID + R+F M ++ I+WNS+++G+S D R EA +++ + E
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE--- 121
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD--HYISIINLLGRAGKVKD 276
PDT ++ +L+ +K F+ M P D + ++I R G+++
Sbjct: 122 -PDTFSYNIMLSCYVRNVNFEKAQSFFDRM-------PFKDAASWNTMITGYARRGEMEK 173
Query: 277 AEEFVLRLPVEPNHAIWGALVG 298
A E + +E N W A++
Sbjct: 174 ARELFYSM-MEKNEVSWNAMIS 194
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 296 bits (759), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/389 (39%), Positives = 240/389 (61%), Gaps = 6/389 (1%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
MYS G M A A+ G + N D S NS+I G VQ Q+ +A ELF+ +P ++ ++WT
Sbjct: 319 MYSKLGYMGEA-KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTD 377
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
MI G+ G++ K +LF MP++D+I WT+MIS +V N EA+ F +M+ P
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ TF+ + A S+A L +G Q+HG VK DL ++NSLVSMY KCG +D+Y+IFS
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFS 497
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
++ + +S+N+MI G S +G +AL ++ + G P+ VTFL +L+AC H G VD
Sbjct: 498 CISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDL 557
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
GW+ F SM +SY ++PG DHY +++LLGR+G + DA + +P +P+ +WG+L+
Sbjct: 558 GWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSA- 616
Query: 301 GLSKTD--ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
SKT D+A A K+L+EL+P +A +V L +Y+ ++ + + + K ++K
Sbjct: 617 --SKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKK 674
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDI 387
PG SWI++KG VH F +GD + ++E+I
Sbjct: 675 DPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 5/227 (2%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D + N +++GY++AG+ +A +F + ++ ++ + M+ GY G++ A LFD M
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGR 141
+R+ I WT+MI GY + + LF M G +N T AV+F A +G
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+HG+ + E+DL L NSL+SMY+K G + ++ +F M +D +SWNS+I GL
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
+ SEA ++E M D V++ ++ + G + K ELF M
Sbjct: 356 QISEAYELFEKMPG----KDMVSWTDMIKGFSGKGEISKCVELFGMM 398
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS I+ + + G L++A+ +F + R+ ++W MIS Y G++ KA +FD MP R +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 88 AWTSMISGYVQNEL-IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
++ +MI+ ++N+ + +A LF ++ ++A + D+ L+
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNAV----SYATMITGFVRAGRFDEAEFLYA- 168
Query: 147 QVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+T ++ D + N L+S Y + G+ +++ R+F MA ++ +S +SM+ G GR +
Sbjct: 169 --ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
A ++++ M E + +T+ ++ AG + G+ LF M
Sbjct: 227 ARSLFDRMTE----RNVITWTAMIDGYFKAGFFEDGFGLFLRM 265
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYL-SAGQVFKACDLFDSMPDRDSI 87
+MI+ Y + G++ KA ++FD +P+R ++ MI+ + + + KA +LF +P+++++
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAV 145
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
++ +MI+G+V+ EA L+ E F + +L G + + + + R GM
Sbjct: 146 SYATMITGFVRAGRFDEAEFLYAETPVK-FRDSVASNVLLSGYLRAGKWNEAVRVFQGMA 204
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
VK +++ +S+V Y K G I D+ +F M R+ I+W +MI G G +
Sbjct: 205 VK-----EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGF 259
Query: 208 TVYETMLEFG-LYPDTVTFLGVLTAC 232
++ M + G + ++ T + AC
Sbjct: 260 GLFLRMRQEGDVKVNSNTLAVMFKAC 285
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 224/366 (61%), Gaps = 7/366 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N+ ++ Y + ++++A+ +FD++PIRN IA T MISGY A A +F M +R+ +
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH--- 144
+W ++I+GY QN EA+SLF + P + +FA + A +A L G Q H
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 145 ---GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
G + ++ E D+ + NSL+ MY KCG +++ Y +F M RD +SWN+MI+G + +G
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+EAL ++ MLE G PD +T +GVL+AC HAG V++G F+SM +G+ P DHY
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++LLGRAG +++A+ + +P++P+ IWG+L+ C + + + + ++LLE++
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR-NITLGKYVAEKLLEVE 591
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
P N+ +V L N+YA + ++ ++RK MR +GV K PGCSWI ++G HVF D+
Sbjct: 592 PSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSH 651
Query: 382 PHVEDI 387
P + I
Sbjct: 652 PRKKQI 657
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 144/259 (55%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N +I+ Y + G LE +++FD +P RN W +++G G + +A LF SMP+RD
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W SM+SG+ Q++ EA+ F M GF +FA + A + +++G Q+H +
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K+ + D+ + ++LV MY+KCG ++D+ R+F M R+ +SWNS+I +G A EAL
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
V++ MLE + PD VT V++ACA + G E+ +V + L+ + +++
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 268 LGRAGKVKDAEEFVLRLPV 286
+ ++K+A +P+
Sbjct: 299 YAKCSRIKEARFIFDSMPI 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 37/190 (19%)
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY---------------- 184
R +H +K+ + ++ ++N L+ Y+KCG ++D ++F M
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 185 ---------------RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
RD+ +WNSM+ G + H R EAL + M + G + +F VL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVE 287
+AC+ ++KG ++ + + S L D YI +++++ + G V DA+ + +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLS---DVYIGSALVDMYSKCGNVNDAQRVFDEMG-D 215
Query: 288 PNHAIWGALV 297
N W +L+
Sbjct: 216 RNVVSWNSLI 225
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 223/363 (61%), Gaps = 4/363 (1%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N+MI GY Q ++++A +LF +P R+ +W MI+G++ ++ KAC LFD MP+++
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
I+WT+MI+GYV+N+ EA+++F +M+ G P GT+ + A +A L +G+Q+H
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN--MAYRDKISWNSMIMGLSDHGR 202
+ K++++ + I+ ++L++MY+K GE+ + ++F N + RD ISWNSMI + HG
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
EA+ +Y M + G P VT+L +L AC+HAGLV+KG E F +V L +HY
Sbjct: 415 GKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYT 474
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+++L GRAG++KD F+ + + +GA++ C + + +A K++LE
Sbjct: 475 CLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVH-NEVSIAKEVVKKVLETGS 533
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
+A +V + NIYAAN + E +R +M+ KG++K PGCSW+ V + H+F GD+ P
Sbjct: 534 DDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHP 593
Query: 383 HVE 385
E
Sbjct: 594 QFE 596
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 10/216 (4%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N+MI+GY Q+G+++KA ELFD +P RN ++W M+ + G++ +A +LF+ MP RD
Sbjct: 142 SWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRD 201
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
++WT+M+ G +N + EA LF M N + +D+ QL
Sbjct: 202 VVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNA----MITGYAQNNRIDEADQL-- 255
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+ + E D N++++ + + E++ + +F M ++ ISW +MI G ++ E
Sbjct: 256 --FQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 206 ALTVYETMLEFG-LYPDTVTFLGVLTACAH-AGLVD 239
AL V+ ML G + P+ T++ +L+AC+ AGLV+
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 129/238 (54%), Gaps = 12/238 (5%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
+M++GY+++ QL A+ LF +P RN ++W MI GY +G++ KA +LFD MP+R+ ++
Sbjct: 114 AMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVS 173
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
W SM+ VQ I EA++LF M ++ + + +D+ R+L
Sbjct: 174 WNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWTAMVDGLAKNGKVDEARRL----F 225
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
+ E ++I N++++ YA+ ID++ ++F M RD SWN+MI G + ++A
Sbjct: 226 DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACG 285
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+++ M E + +++ ++T ++ +F+ M+ ++P Y+SI++
Sbjct: 286 LFDRMPE----KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 130/255 (50%), Gaps = 18/255 (7%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIR-NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
+I GY++ G + +A+ELFD V R N + WT M+SGYL + Q+ A LF MP+R+ ++
Sbjct: 83 VITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS 142
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
W +MI GY Q+ I +A+ LF EM N L + +GR M +
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKAL---------VQRGRIDEAMNL 193
Query: 149 -KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ + D++ ++V AK G++D++ R+F M R+ ISWN+MI G + + R EA
Sbjct: 194 FERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEAD 253
Query: 208 TVYETMLE--FGLYPDTVT-FLGVLTACAHAGLVDKGWEL----FNSMVNSYGLQPGFDH 260
+++ M E F + +T F+ GL D+ E + +M+ Y +
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 261 YISIINLLGRAGKVK 275
+++ + + R G VK
Sbjct: 314 ALNVFSKMLRDGSVK 328
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 136/269 (50%), Gaps = 19/269 (7%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS-IA 88
+I + G++ +A++LFD +P R+ + WT +I+GY+ G + +A +LFD + R + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
WT+M+SGY++++ ++ A LF EM N + +D+ +L
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWN----TMIDGYAQSGRIDKALEL----F 163
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
+ E +++ NS+V + G ID++ +F M RD +SW +M+ GL+ +G+ EA
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARR 223
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
+++ M E + +++ ++T A +D+ +LF M + F + ++I
Sbjct: 224 LFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMP-----ERDFASWNTMITGF 274
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
R ++ A R+P E N W ++
Sbjct: 275 IRNREMNKACGLFDRMP-EKNVISWTTMI 302
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 274 bits (700), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 139/365 (38%), Positives = 221/365 (60%), Gaps = 3/365 (0%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S SM+ GYVQ G++E A+ELF+ +P++ IA MISG G++ KA +FDSM +R+
Sbjct: 236 SWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+W ++I + +N EA+ LF M G P T + S+A L G+Q+H
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHA 355
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
V+ ++ D+ + + L++MY KCGE+ S IF +D I WNS+I G + HG E
Sbjct: 356 QLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEE 415
Query: 206 ALTVY-ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
AL V+ E L P+ VTF+ L+AC++AG+V++G +++ SM + +G++P HY +
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
+++LGRAG+ +A E + + VEP+ A+WG+L+G C + + DVA K+L+E++P N
Sbjct: 476 VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACR-THSQLDVAEFCAKKLIEIEPEN 534
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD-RLEPH 383
+ ++ L N+YA+ R ++ LRK M+ + VRK+PGCSW V+ +VH F+ G P
Sbjct: 535 SGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPE 594
Query: 384 VEDIL 388
E IL
Sbjct: 595 QESIL 599
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 18/274 (6%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S NSM+ GY A++LFD +P RN I+W ++SGY+ G++ +A +FD MP+R+
Sbjct: 50 SWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERN 109
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
++WT+++ GYV N + A SLF +M ++ V+ +D +L+
Sbjct: 110 VVSWTALVKGYVHNGKVDVAESLFWKMPEKN----KVSWTVMLIGFLQDGRIDDACKLYE 165
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
M I + D I S++ K G +D++ IF M+ R I+W +M+ G + R +
Sbjct: 166 M----IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDD 221
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
A +++ M E V++ +L G ++ ELF M ++P ++I
Sbjct: 222 ARKIFDVMPE----KTEVSWTSMLMGYVQNGRIEDAEELFEVM----PVKPVIACN-AMI 272
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+ LG+ G++ A V E N A W ++ +
Sbjct: 273 SGLGQKGEIAKARR-VFDSMKERNDASWQTVIKI 305
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 127/248 (51%), Gaps = 25/248 (10%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S +++ GYV G+++ A+ LF +P +NK++WT M+ G+L G++ AC L++ +PD+D
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKD 171
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+IA TSMI G + + EA +F EM T+ + G +D R++
Sbjct: 172 NIARTSMIHGLCKEGRVDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDDARKI-- 225
Query: 146 MQVKTIYEYDLILENSLVSM------YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
+D++ E + VS Y + G I+D+ +F M + I+ N+MI GL
Sbjct: 226 --------FDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQ 277
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
G ++A V+++M E + ++ V+ G + +LF ++ G++P F
Sbjct: 278 KGEIAKARRVFDSMKE----RNDASWQTVIKIHERNGFELEALDLF-ILMQKQGVRPTFP 332
Query: 260 HYISIINL 267
ISI+++
Sbjct: 333 TLISILSV 340
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 45/278 (16%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D+ + SMI+G + G++++A+E+FD + R+ I WT M++GY +V A +FD MP
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
++ ++WTSM+ GYVQN I +A LF M P+ A
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEELFEVM------PVKPVIAC---------------- 268
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
N+++S + GEI + R+F +M R+ SW ++I +G
Sbjct: 269 -----------------NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGF 311
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
EAL ++ M + G+ P T + +L+ CA + G ++ +V Q D Y+
Sbjct: 312 ELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC---QFDVDVYV 368
Query: 263 S--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ ++ + + G++ ++ R P + + +W +++
Sbjct: 369 ASVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIIS 405
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 38/246 (15%)
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
G++ +A LFDS + +W SM++GY N + +A LF EM NG ++
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNG---LVS 87
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
G M + +D+ R++ + + E +++ +LV Y G++D + +F M ++K+
Sbjct: 88 GYMKN-GEIDEARKVFDL----MPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN-- 246
SW M++G GR +A +YE + + D + ++ G VD+ E+F+
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPD----KDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 247 ---------SMVNSYGLQPGFDHYISIINLLGRA---------------GKVKDAEEFVL 282
+MV YG D I +++ G+++DAEE
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFE 258
Query: 283 RLPVEP 288
+PV+P
Sbjct: 259 VMPVKP 264
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 274 bits (700), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 217/365 (59%), Gaps = 1/365 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D ++NS+IN Y G + A LFD +P + ++W +I GY+ AG++ A LF M
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
++++I+WT+MISGYVQ ++ EA+ LF EM P N + A A + L+QG+
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H KT D +L L+ MYAKCGE++++ +F N+ + +W ++I G + HG
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
EA++ + M + G+ P+ +TF VLTAC++ GLV++G +F SM Y L+P +HY
Sbjct: 329 GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYG 388
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
I++LLGRAG + +A+ F+ +P++PN IWGAL+ C + K + ++ + L+ +DP
Sbjct: 389 CIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK-NIELGEEIGEILIAIDP 447
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
+ +V NI+A + + + R+ M+ +GV K PGCS I ++G H F +GDR P
Sbjct: 448 YHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHP 507
Query: 383 HVEDI 387
+E I
Sbjct: 508 EIEKI 512
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 40/268 (14%)
Query: 63 SGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG 122
S +L Q+ +FD D+ W MI G+ ++ ++ L+ M+ +P N
Sbjct: 62 SDFLPYAQI-----VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSS-APHNA 115
Query: 123 -TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
TF L A +++ ++ Q+H K YE D+ NSL++ YA G ++ +F
Sbjct: 116 YTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDR 175
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG------------------------ 217
+ D +SWNS+I G G+ ALT++ M E
Sbjct: 176 IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235
Query: 218 -------LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGR 270
+ PD V+ L+ACA G +++G + +S +N ++ +I++ +
Sbjct: 236 HEMQNSDVEPDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAK 294
Query: 271 AGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G++++A E + + A W AL+
Sbjct: 295 CGEMEEALEVFKNIKKKSVQA-WTALIS 321
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/368 (39%), Positives = 226/368 (61%), Gaps = 4/368 (1%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRN-KI-AWTCMISGYLSAGQVFKACDLFDSMPDR 84
LN++I+ Y + G +E A+ L + ++ KI +T ++ GY+ G + +A ++F S+ DR
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D +AWT+MI GY Q+ EAI+LF M+ G P + T A + S+A L G+Q+H
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHGRA 203
G VK+ Y + + N+L++MYAK G I + R F + RD +SW SMI+ L+ HG A
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
EAL ++ETML GL PD +T++GV +AC HAGLV++G + F+ M + + P HY
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+++L GRAG +++A+EF+ ++P+EP+ WG+L+ C + K + D+ A +RLL L+P
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK-NIDLGKVAAERLLLLEPE 615
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 383
N+ + AL N+Y+A + E +RK M+ V+K G SWI VK +VHVF D P
Sbjct: 616 NSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPE 675
Query: 384 VEDILLQI 391
+I + +
Sbjct: 676 KNEIYMTM 683
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 140/291 (48%), Gaps = 41/291 (14%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
+N+++N Y + G A++LFD +P+R +W ++S Y G + C+ FD +P RDS
Sbjct: 52 MNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDS 111
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
++WT+MI GY +AI + G+M+ G P T + ++ + ++ G+++H
Sbjct: 112 VSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSF 171
Query: 147 QVKTIYEYDLILENSLVSMYAKC-------------------------------GEIDDS 175
VK ++ + NSL++MYAKC G++D +
Sbjct: 172 IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLA 231
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY-PDTVTFLGVLTACAH 234
F MA RD ++WNSMI G + G AL ++ ML L PD T VL+ACA+
Sbjct: 232 MAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
Query: 235 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFV 281
+ G ++ + +V + GFD ++N L R G V+ A +
Sbjct: 292 LEKLCIGKQIHSHIVTT-----GFDISGIVLNALISMYSRCGGVETARRLI 337
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 72/312 (23%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D S N+MI ++Q GQ++ A F+ + R+ + W MISG+ G +A D+F M
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
RDS+ SP T A + A ++ L G+Q
Sbjct: 271 -RDSL-----------------------------LSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR------------------------- 177
+H V T ++ I+ N+L+SMY++CG ++ + R
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 178 --------IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
IF ++ RD ++W +MI+G HG EA+ ++ +M+ G P++ T +L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLP 285
+ + + G ++ S V S G + +S+ N L +AG + A +
Sbjct: 421 SVASSLASLSHGKQIHGSAVKS-----GEIYSVSVSNALITMYAKAGNITSASRAFDLIR 475
Query: 286 VEPNHAIWGALV 297
E + W +++
Sbjct: 476 CERDTVSWTSMI 487
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 265 bits (678), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 217/374 (58%), Gaps = 2/374 (0%)
Query: 15 LEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKA 74
+E N N + N+M++ Y + G +E A+ LFD + ++ + WT M+ GY + A
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 75 CDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGS 133
++ +SMP +D +AW ++IS Y QN EA+ +F E+ LN T A
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
V L+ GR +H K + + ++L+ MY+KCG+++ S +F+++ RD W++M
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I GL+ HG +EA+ ++ M E + P+ VTF V AC+H GLVD+ LF+ M ++YG
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRA 313
+ P HY I+++LGR+G ++ A +F+ +P+ P+ ++WGAL+G C + + ++A A
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKI-HANLNLAEMA 556
Query: 314 TKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHV 373
RLLEL+P N HV L NIYA + ++ LRK MR+ G++K PGCS I + G +H
Sbjct: 557 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 616
Query: 374 FSSGDRLEPHVEDI 387
F SGD P E +
Sbjct: 617 FLSGDNAHPMSEKV 630
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 132/271 (48%), Gaps = 36/271 (13%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y S G + AC +F ++ ++D ++W SMI+G+VQ +A+ LF +M +
Sbjct: 172 LIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKAS 231
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF- 179
+ T + A + L+ GRQ+ + +L L N+++ MY KCG I+D+ R+F
Sbjct: 232 HVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFD 291
Query: 180 ------------------------------SNMAYRDKISWNSMIMGLSDHGRASEALTV 209
++M +D ++WN++I +G+ +EAL V
Sbjct: 292 AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV 351
Query: 210 Y-ETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPGFDHYISIINL 267
+ E L+ + + +T + L+ACA G ++ G W +S + +G++ F ++I++
Sbjct: 352 FHELQLQKNMKLNQITLVSTLSACAQVGALELGRW--IHSYIKKHGIRMNFHVTSALIHM 409
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ G ++ + E V + + +W A++G
Sbjct: 410 YSKCGDLEKSRE-VFNSVEKRDVFVWSAMIG 439
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 3/225 (1%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMG 132
A +FD +P +S AW ++I Y +I F +M++ P TF L A
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 133 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 192
V+ L G+ LHGM VK+ D+ + NSL+ Y CG++D + ++F+ + +D +SWNS
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 193 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
MI G G +AL +++ M + VT +GVL+ACA ++ G ++ S +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC-SYIEEN 261
Query: 253 GLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +++++ + G ++DA+ + E ++ W ++
Sbjct: 262 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTML 305
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 264 bits (675), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 219/367 (59%), Gaps = 7/367 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS+++ Y + G+ ++A+ +F+ +P ++ ++W ++SGY+S+G + +A +F M +++ +
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD---QGRQLH 144
+W MISG +N E + LF M GF P + F+ GA+ S A L G+Q H
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFS---GAIKSCAVLGAYCNGQQYH 440
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+K ++ L N+L++MYAKCG ++++ ++F M D +SWN++I L HG +
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGA 500
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
EA+ VYE ML+ G+ PD +T L VLTAC+HAGLVD+G + F+SM Y + PG DHY +
Sbjct: 501 EAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL 560
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
I+LL R+GK DAE + LP +P IW AL+ C + + ++ A +L L P +
Sbjct: 561 IDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRV-HGNMELGIIAADKLFGLIPEH 619
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 384
++ L N++AA + E+ +RK MR +GV+K CSWI ++ +VH F D P
Sbjct: 620 DGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEA 679
Query: 385 EDILLQI 391
E + + +
Sbjct: 680 EAVYIYL 686
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 46/329 (13%)
Query: 12 SNALEGNLNNFDDQS----LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLS 67
+ A+ GN+ F Q LN +I+ Y ++ +L A++LFD + +KIA T M+SGY +
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 68 AGQVFKACDLFDSMPD--RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 125
+G + A +F+ P RD++ + +MI+G+ N AI+LF +M GF P N TFA
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 126 VLFGAMGSVAYLD-QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE----IDDSYRIFS 180
+ + VA + Q Q H +K+ Y + N+LVS+Y+KC + + ++F
Sbjct: 153 SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 181 NMAYRDKISW--------------------------------NSMIMGLSDHGRASEALT 208
+ +D+ SW N+MI G + G EAL
Sbjct: 213 EILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALE 272
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
+ M+ G+ D T+ V+ ACA AGL+ G ++ ++ FD+ S+++L
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVSLY 330
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ GK +A ++P + + W AL+
Sbjct: 331 YKCGKFDEARAIFEKMPAK-DLVSWNALL 358
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 141/314 (44%), Gaps = 47/314 (14%)
Query: 28 NSMINGYVQAGQ----LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
N++++ Y + L A+++FD + +++ +WT M++GY+ G +L + M D
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD 247
Query: 84 R-DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+A+ +MISGYV EA+ + M++ G T+ + A + L G+Q
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS---------- 192
+H ++ ++ +NSLVS+Y KCG+ D++ IF M +D +SWN+
Sbjct: 308 VHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH 366
Query: 193 ---------------------MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
MI GL+++G E L ++ M G P F G + +
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS----IINLLGRAGKVKDAEEFVLRLPVE 287
CA G G + + L+ GFD +S +I + + G V++A + +P
Sbjct: 427 CAVLGAYCNGQQYHAQL-----LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC- 480
Query: 288 PNHAIWGALVGVCG 301
+ W AL+ G
Sbjct: 481 LDSVSWNALIAALG 494
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 227/423 (53%), Gaps = 38/423 (8%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDT----------- 49
+YS G + S AL D + N+MI+GY G+ E + LF
Sbjct: 265 LYSKCGKIKMGS-ALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS 323
Query: 50 -----VPIRNK------IAWTCMISGYLSAGQVFKAC--------------DLFDSMPDR 84
VP+ I C+ S +LS V A LFD P++
Sbjct: 324 TLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 383
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
+W +MISGY QN L +AISLF EM FSP T + A + L G+ +H
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVH 443
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+ T +E + + +L+ MYAKCG I ++ R+F M +++++WN+MI G HG+
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ 503
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
EAL ++ ML G+ P VTFL VL AC+HAGLV +G E+FNSM++ YG +P HY +
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
+++LGRAG ++ A +F+ + +EP ++W L+G C + K D ++A +++L ELDP N
Sbjct: 564 VDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHK-DTNLARTVSEKLFELDPDN 622
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 384
HV L NI++A+ + + ++R+ + + + KAPG + I + HVF+SGD+ P V
Sbjct: 623 VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQV 682
Query: 385 EDI 387
++I
Sbjct: 683 KEI 685
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 112/244 (45%), Gaps = 5/244 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T IS Y G++ LF D +A+ +MI GY N ++SLF E+M G
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ T L G + + +HG +K+ + + +L ++Y+K EI+ + ++
Sbjct: 320 LRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKL 376
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + SWN+MI G + +G +A++++ M + P+ VT +L+ACA G +
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL 436
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G + + +V S + ++I + + G + +A + L + N W ++
Sbjct: 437 SLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR-LFDLMTKKNEVTWNTMIS 494
Query: 299 VCGL 302
GL
Sbjct: 495 GYGL 498
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 6/227 (2%)
Query: 53 RNKIAWTCMISGYLS-AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
RN I+ ++ LS G ++ A D+F S+ D + ++ G+ NE ++S+F
Sbjct: 49 RNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAH 108
Query: 112 MM-AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 170
+ + P + T+A A GR +HG V + +L+L +++V MY K
Sbjct: 109 LRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFW 168
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVL 229
++D+ ++F M +D I WN+MI G + E++ V+ ++ E DT T L +L
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS-IINLLGRAGKVK 275
A A + G ++ +S+ G D+ ++ I+L + GK+K
Sbjct: 229 PAVAELQELRLGMQI-HSLATKTGCY-SHDYVLTGFISLYSKCGKIK 273
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 216/364 (59%), Gaps = 1/364 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N+++N Y G+++ A +F ++ R+ I+WT ++ GY+ G + A FD MP RD I
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+WT MI GY++ E++ +F EM + G P T + A + L+ G +
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K + D+++ N+L+ MY KCG + + ++F +M RDK +W +M++GL+++G+ EA+
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 454
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
V+ M + + PD +T+LGVL+AC H+G+VD+ + F M + + ++P HY ++++
Sbjct: 455 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 514
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LGRAG VK+A E + ++P+ PN +WGAL+G L D +A A K++LEL+P N
Sbjct: 515 LGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLH-NDEPMAELAAKKILELEPDNGAV 573
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+ LCNIYA R +L +R+++ ++K PG S I V G H F +GD+ E+I
Sbjct: 574 YALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEI 633
Query: 388 LLQI 391
+++
Sbjct: 634 YMKL 637
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y G + A +FD D +W MISGY + + E+I L EM + SP
Sbjct: 176 LVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPT 235
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ T ++ A V D +++H + E L LEN+LV+ YA CGE+D + RIF
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 181 NMAYRDKISWNSMIMGLSDHG----------------------------RA---SEALTV 209
+M RD ISW S++ G + G RA +E+L +
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
+ M G+ PD T + VLTACAH G ++ G
Sbjct: 356 FREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
G V A LF +P+ D + W +MI G+ + + E + L+ M+ G +P + TF L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 129 -GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 187
G L G++LH VK +L ++N+LV MY+ CG +D + +F D
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
SWN MI G + E++ + M + P +VT L VL+AC+
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACS 247
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 216/369 (58%), Gaps = 5/369 (1%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D +++MI+ Y ++G + LF+ + I+G G V KA ++F+
Sbjct: 286 DKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFK 345
Query: 83 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
++ + ++WTS+I+G QN EA+ LF EM G P + T + A G++A L
Sbjct: 346 EQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALG 405
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
GR HG V+ ++ + ++L+ MYAKCG I+ S +F+ M ++ + WNS++ G S
Sbjct: 406 HGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFS 465
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
HG+A E ++++E+++ L PD ++F +L+AC GL D+GW+ F M YG++P
Sbjct: 466 MHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRL 525
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLL 318
+HY ++NLLGRAGK+++A + + +P EP+ +WGAL+ C L + + D+A A ++L
Sbjct: 526 EHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRL-QNNVDLAEIAAEKLF 584
Query: 319 ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
L+P N +V L NIYAA E+ S+R +M G++K PGCSWI VK RV+ +GD
Sbjct: 585 HLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGD 644
Query: 379 RLEPHVEDI 387
+ P ++ I
Sbjct: 645 KSHPQIDQI 653
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 135/279 (48%), Gaps = 14/279 (5%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----DR 84
SM + Y++ G++ A+++FD + ++ + + ++ Y G + + + M +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
+ ++W ++SG+ ++ EA+ +F ++ GF P T + + ++G L+ GR +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
G +K D + ++++ MY K G + +F+ + N+ I GLS +G
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
+AL ++E E + + V++ ++ CA G + ELF M G++P ++++I
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKP---NHVTI 391
Query: 265 INLLGRAGKV------KDAEEFVLRLPVEPNHAIWGALV 297
++L G + + F +R+ + N + AL+
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 143/340 (42%), Gaps = 50/340 (14%)
Query: 64 GYLSAGQV--------FKACDL-FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA 114
GY+SA + F DL S+PD +++S+I + +L ++I +F M +
Sbjct: 50 GYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFS 109
Query: 115 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
HG P + LF ++ G+Q+H + + + D ++ S+ MY +CG + D
Sbjct: 110 HGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 175 SYRIFSNMAYRDK-----------------------------------ISWNSMIMGLSD 199
+ ++F M+ +D +SWN ++ G +
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
G EA+ +++ + G PD VT VL + + +++ G L + V GL
Sbjct: 230 SGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG-RLIHGYVIKQGLLKDKC 288
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC--GLSKTDADVASRATKRL 317
++I++ G++G V + + + G+ GL ++ ++
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
+EL+ ++ +A C A N + IE L +EM++ GV+
Sbjct: 349 MELNVVSWTSIIAGC---AQNGKDIEALELFREMQVAGVK 385
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 212/364 (58%), Gaps = 2/364 (0%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S SM+ GY +G++E A+E F+ +P++ IA MI G+ G++ KA +FD M DRD
Sbjct: 236 SWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRD 295
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+ W MI Y + EA+ LF +M G P + + ++A L GRQ+H
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
V+ ++ D+ + + L++MY KCGE+ + +F + +D I WNS+I G + HG E
Sbjct: 356 HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEE 415
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
AL ++ M G P+ VT + +LTAC++AG +++G E+F SM + + + P +HY +
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTV 475
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 325
++LGRAG+V A E + + ++P+ +WGAL+G C + + D+A A K+L E +P NA
Sbjct: 476 DMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK-THSRLDLAEVAAKKLFENEPDNA 534
Query: 326 PGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVE 385
+V L +I A+ + ++ +RK MR V K PGCSWI V +VH+F+ G ++ H E
Sbjct: 535 GTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGG-IKNHPE 593
Query: 386 DILL 389
++
Sbjct: 594 QAMI 597
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 140/273 (51%), Gaps = 20/273 (7%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S NS+++GY G ++A++LFD + RN ++W ++SGY+ + +A ++F+ MP+R+
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERN 109
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
++WT+M+ GY+Q ++ EA SLF M ++ V+FG + +D+ R+L+
Sbjct: 110 VVSWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWTVMFGGLIDDGRIDKARKLYD 165
Query: 146 MQ-VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
M VK D++ +++ + G +D++ IF M R+ ++W +MI G + R
Sbjct: 166 MMPVK-----DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVD 220
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
A ++E M E V++ +L +G ++ E F M ++P I
Sbjct: 221 VARKLFEVMPE----KTEVSWTSMLLGYTLSGRIEDAEEFFEVM----PMKPVIACNAMI 272
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ G G++ A V L + ++A W ++
Sbjct: 273 VG-FGEVGEISKARR-VFDLMEDRDNATWRGMI 303
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 13/246 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
++ S M G + G+++KA++L+D +P+++ +A T MI G G+V +A +FD M
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR 199
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+R+ + WT+MI+GY QN + A LF E+M + ++ T ++L G S D
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEK-TEVSWT-SMLLGYTLSGRIEDAEEF 256
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
M +K + I N+++ + + GEI + R+F M RD +W MI G
Sbjct: 257 FEVMPMKPV-----IACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGF 311
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
EAL ++ M + G+ P + + +L+ CA + G V+++ ++ FD +
Sbjct: 312 ELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG-----RQVHAHLVRCQFDDDV 366
Query: 263 SIINLL 268
+ ++L
Sbjct: 367 YVASVL 372
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 155/332 (46%), Gaps = 28/332 (8%)
Query: 31 INGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWT 90
I+ + G++ +A++ FD++ + +W ++SGY S G +A LFD M +R+ ++W
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 150
++SGY++N +I EA ++F E+M V + AM Y+ +G + G
Sbjct: 84 GLVSGYIKNRMIVEARNVF-ELMPE-------RNVVSWTAMVK-GYMQEG--MVGEAESL 132
Query: 151 IYEYDLILENSLVSMYAKC---GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ E S M+ G ID + +++ M +D ++ +MI GL GR EA
Sbjct: 133 FWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEAR 192
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+++ M E + VT+ ++T VD +LF M + + S++
Sbjct: 193 LIFDEMRE----RNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS-----WTSMLLG 243
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
+G+++DAEEF +P++P A +VG + + +R L+E D NA
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEIS---KARRVFDLME-DRDNATW 299
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
+ Y +E L +M+ +GVR +
Sbjct: 300 R-GMIKAYERKGFELEALDLFAQMQKQGVRPS 330
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 200/329 (60%), Gaps = 1/329 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ ++ Y + ++ + +F + RD I+W S+++GYVQN EA+ LF +M+
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P F+ + A +A L G+QLHG ++ + ++ + ++LV MY+KCG I + +I
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M D++SW ++IMG + HG EA++++E M G+ P+ V F+ VLTAC+H GLV
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 460
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
D+ W FNSM YGL +HY ++ +LLGRAGK+++A F+ ++ VEP ++W L+
Sbjct: 461 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C + K + ++A + +++ +D N +V +CN+YA+N R E+ LR MR KG+RK
Sbjct: 521 SCSVHK-NLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRK 579
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDI 387
P CSWI +K + H F SGDR P ++ I
Sbjct: 580 KPACSWIEMKNKTHGFVSGDRSHPSMDKI 608
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 144/285 (50%), Gaps = 27/285 (9%)
Query: 28 NSMINGYVQ---AGQLEKAQELFDTVPIRNK-------IAWTCMIS-GYLSAGQVFKACD 76
N+++N Y + G +FD +P R A TC++ G S +VF+
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV-- 201
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
MP +D +++ ++I+GY Q+ + +A+ + EM P + T + +
Sbjct: 202 ----MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
+ +G+++HG ++ + D+ + +SLV MYAK I+DS R+FS + RD ISWNS++ G
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+GR +EAL ++ M+ + P V F V+ ACAH + G +L + Y L+
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL-----HGYVLRG 372
Query: 257 GFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
GF I +++++ + G +K A + R+ V + W A++
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAII 416
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 46/278 (16%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS Y + + +A LF ++ +AW S+I + L ++A++ F EM A G P
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK------------ 168
+ F + + + L G +HG V+ + DL N+L++MYAK
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 169 -----------CGE-------------IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
G+ ID R+F M +D +S+N++I G + G
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE 224
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH--YI 262
+AL + M L PD+ T VL + V KG E ++ Y ++ G D YI
Sbjct: 225 DALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE-----IHGYVIRKGIDSDVYI 279
Query: 263 --SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
S++++ ++ +++D+E RL + W +LV
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGIS-WNSLVA 316
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/358 (35%), Positives = 214/358 (59%), Gaps = 1/358 (0%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
M+ Y ++G+L A+++FD +P R+ +A T MI+ Y G + +A +LF + +D++ W
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 223
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 149
T+MI G V+N+ + +A+ LF EM S T + A + L+ GR +H
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN 283
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
E + N+L++MY++CG+I+++ R+F M +D IS+N+MI GL+ HG + EA+
Sbjct: 284 QRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINE 343
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 269
+ M+ G P+ VT + +L AC+H GL+D G E+FNSM + ++P +HY I++LLG
Sbjct: 344 FRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG 403
Query: 270 RAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHV 329
R G++++A F+ +P+EP+H + G L+ C + + ++ + KRL E + ++ +V
Sbjct: 404 RVGRLEEAYRFIENIPIEPDHIMLGTLLSACKI-HGNMELGEKIAKRLFESENPDSGTYV 462
Query: 330 ALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
L N+YA++ + E T +R+ MR G+ K PGCS I V ++H F GD PH E I
Sbjct: 463 LLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAI 520
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 8/175 (4%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A D+F + + + +T+MI G+V + A+ +SL+ M+ + P N + A
Sbjct: 80 AYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD- 138
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
L R++H +K + + ++ +Y K GE+ ++ ++F M RD ++ M
Sbjct: 139 ---LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVM 195
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
I S+ G EAL +++ + DTV + ++ ++K ELF M
Sbjct: 196 INCYSECGFIKEALELFQDV----KIKDTVCWTAMIDGLVRNKEMNKALELFREM 246
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 104/239 (43%), Gaps = 29/239 (12%)
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 186
L + S + +H ++T ++ D + L+ + + +D +Y +FS ++ +
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC-------AHAGLVD 239
+ +MI G GR+++ +++Y M+ + PD VL AC HA ++
Sbjct: 92 VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLK 151
Query: 240 KGW-----------ELFNS---MVNSYGL---QPGFDHYIS--IINLLGRAGKVKDAEEF 280
G+ E++ +VN+ + P DH + +IN G +K+A E
Sbjct: 152 LGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALEL 211
Query: 281 VLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAND 339
+ ++ + W A++ GL + + R ++++ ++A A+C + A +D
Sbjct: 212 FQDVKIK-DTVCWTAMID--GLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 267
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 258 bits (658), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 130/334 (38%), Positives = 211/334 (63%), Gaps = 3/334 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDR-DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
+I+ Y G++ +F M +R D++ W SMISGY+ NEL+A+A+ L M+ G
Sbjct: 558 LIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRL 617
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ +A + A SVA L++G ++H V+ E D+++ ++LV MY+KCG +D + R F
Sbjct: 618 DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFF 677
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLV 238
+ M R+ SWNSMI G + HG+ EAL ++ETM L+ PD VTF+GVL+AC+HAGL+
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++G++ F SM +SYGL P +H+ + ++LGRAG++ E+F+ ++P++PN IW ++G
Sbjct: 738 EEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLG 797
Query: 299 VCGLSK-TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
C + A++ +A + L +L+P NA +V L N+YAA R +L RK+M+ V+
Sbjct: 798 ACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVK 857
Query: 358 KAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
K G SW+ +K VH+F +GD+ P + I ++
Sbjct: 858 KEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKL 891
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 126/255 (49%), Gaps = 19/255 (7%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSP 119
++S + +G + A +F+ M R+++ ++ G V+ + EA LF +M + SP
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP 308
Query: 120 LNGTFAVLFGAMGSVAY-----LDQGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGEID 173
++ +L + + L +GR++HG + T + ++ + + N LV+MYAKCG I
Sbjct: 309 --ESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
D+ R+F M +D +SWNSMI GL +G EA+ Y++M + P + T + L++CA
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN----LLGRAGKVKDAEEFVLRLPVEPN 289
W ++ L+ G D +S+ N L G + + + +P E +
Sbjct: 427 SL-----KWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHD 480
Query: 290 HAIWGALVGVCGLSK 304
W +++G S+
Sbjct: 481 QVSWNSIIGALARSE 495
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 124/239 (51%), Gaps = 4/239 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y G + A +F M D+DS++W SMI+G QN EA+ + M H P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ T + S+ + G+Q+HG +K + ++ + N+L+++YA+ G +++ +IFS
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 181 NMAYRDKISWNSMIMGLSDHGRA-SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+M D++SWNS+I L+ R+ EA+ + G + +TF VL+A + +
Sbjct: 475 SMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGE 534
Query: 240 KGWELFN-SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G ++ ++ N+ + ++ ++I G+ G++ E+ R+ ++ W +++
Sbjct: 535 LGKQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++IN Y++ G A+++FD +P+RN ++W C++SGY G+
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE----------------- 82
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA---MGSVAYLDQGRQLH 144
EA+ +M+ G F + A +GSV L GRQ+H
Sbjct: 83 --------------HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL-FGRQIH 127
Query: 145 GMQVKTIYEYDLILENSLVSMYAKC-GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
G+ K Y D ++ N L+SMY KC G + + F ++ ++ +SWNS+I S G
Sbjct: 128 GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187
Query: 204 SEALTVYETMLEFGLYPDTVTFLG-VLTACA 233
A ++ +M G P TF V TAC+
Sbjct: 188 RSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----- 82
+++++ Y + G+L+ A F+T+P+RN +W MISGY GQ +A LF++M
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVAYLDQ 139
D + + ++S L+ E F M ++G +P F+ + +G LD+
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 775
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
V + R H K + D+ L N+L++ Y + G+ + ++F M R+ +SW +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
+ G S +G EAL M++ G++ + F+ VL AC G V
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 26/252 (10%)
Query: 58 WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF 117
W C+ G V A F + ++S++W S+IS Y Q A +F M G
Sbjct: 150 WKCI-------GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 118 SPLNGTFAVLFGAMGSVAYLDQG--RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
P TF L S+ D Q+ K+ DL + + LVS +AK G + +
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE-FGLYPDTVTFLGVLTACAH 234
++F+ M R+ ++ N +++GL EA ++ M + P++ L L++
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL--LSSFPE 320
Query: 235 AGLVD-----KGWELFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLP 285
L + KG E+ ++ + GL D + I +N+ + G + DA V
Sbjct: 321 YSLAEEVGLKKGREVHGHVITT-GL---VDFMVGIGNGLVNMYAKCGSIADARR-VFYFM 375
Query: 286 VEPNHAIWGALV 297
+ + W +++
Sbjct: 376 TDKDSVSWNSMI 387
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
++++ + LE+ E+ +R + + + ++ Y G++ A F++MP
Sbjct: 624 TVLSAFASVATLERGMEV-HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQG 140
R+S +W SMISGY ++ EA+ LF M G +P + TF + A L++G
Sbjct: 683 RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 254 bits (648), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 218/368 (59%), Gaps = 3/368 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D+ +S+++ Y + G L A+ +FD++ ++N I+WT M+SGY +G+ +A +LF +P
Sbjct: 139 DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILP 198
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGR 141
++ +WT++ISG+VQ+ EA S+F EM L+ + + GA ++A GR
Sbjct: 199 VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGR 258
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+HG+ + ++ + + N+L+ MYAKC ++ + IFS M +RD +SW S+I+G++ HG
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+A +AL +Y+ M+ G+ P+ VTF+G++ AC+H G V+KG ELF SM YG++P HY
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++LLGR+G + +AE + +P P+ W AL+ C + + R L+
Sbjct: 379 TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACK-RQGRGQMGIRIADHLVSSF 437
Query: 322 PLNAPG-HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRL 380
L P ++ L NIYA+ +++ R+++ VRK PG S + V+ VF +G+
Sbjct: 438 KLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETS 497
Query: 381 EPHVEDIL 388
P EDI
Sbjct: 498 HPLKEDIF 505
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSP 119
+++ Y G A +FD MP RD IAW S+++ Q L + +S+F + + P
Sbjct: 44 LVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRP 103
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ F+ L A ++ +D GRQ+H + + Y D ++++SLV MYAKCG ++ + +F
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
++ ++ ISW +M+ G + GR EAL ++ + LY T G + +
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQS-------G 216
Query: 240 KGWELFN 246
KG E F+
Sbjct: 217 KGLEAFS 223
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 11/223 (4%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L + LH VK L N+LV++Y KCG + ++F M +RD I+W S++
Sbjct: 19 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA 78
Query: 197 LSDHGRASEAL-TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
L+ + + L GL PD F ++ ACA+ G +D G ++ + S +
Sbjct: 79 LNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS---E 135
Query: 256 PGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRA 313
D + S++++ + G + A+ + V+ N W A+V G +K+ +
Sbjct: 136 YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVS--GYAKSGRKEEALE 192
Query: 314 TKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
R+L + N AL + + + + +E S+ EMR + V
Sbjct: 193 LFRILPVK--NLYSWTALISGFVQSGKGLEAFSVFTEMRRERV 233
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 205/359 (57%), Gaps = 11/359 (3%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
S+I+ Y + G +E+A+++ R ++ T + ++ + C ++
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMC-----------VS 570
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
W S+ISGYV E +A LF MM G +P T+A + ++A G+Q+H +
Sbjct: 571 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 630
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
K + D+ + ++LV MY+KCG++ DS +F RD ++WN+MI G + HG+ EA+
Sbjct: 631 KKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQ 690
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
++E M+ + P+ VTF+ +L ACAH GL+DKG E F M YGL P HY +++++L
Sbjct: 691 LFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDIL 750
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGH 328
G++GKVK A E + +P E + IW L+GVC + + + +VA AT LL LDP ++ +
Sbjct: 751 GKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAY 810
Query: 329 VALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
L N+YA +++ LR+ MR ++K PGCSW+ +K +HVF GD+ P E+I
Sbjct: 811 TLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEI 869
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 110/207 (53%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
LN ++ Y + A +FD +P+R+ ++W MI+GY + +FKA F+ MP RD
Sbjct: 86 LNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDV 145
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
++W SM+SGY+QN ++I +F +M G TFA++ + G Q+HG+
Sbjct: 146 VSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGI 205
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
V+ + D++ ++L+ MYAK +S R+F + ++ +SW+++I G + S A
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACA 233
L ++ M + + VL +CA
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 121/234 (51%), Gaps = 2/234 (0%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 115
I T + Y + A LFD+ + + ++ +MI+GY Q E +A+ LF +M+
Sbjct: 317 IVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 376
Query: 116 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
G + + +F A V L +G Q++G+ +K+ D+ + N+ + MY KC + ++
Sbjct: 377 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 436
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
+R+F M RD +SWN++I +G+ E L ++ +ML + PD TF +L AC
Sbjct: 437 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-G 495
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 289
G + G E+ +S+V S G+ S+I++ + G +++AE+ R N
Sbjct: 496 GSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 548
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 128/268 (47%), Gaps = 39/268 (14%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELF--------------------------DT------- 49
D S NSM++GY+Q G+ K+ E+F DT
Sbjct: 144 DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIH 203
Query: 50 -VPIR-----NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 103
+ +R + +A + ++ Y + ++ +F +P+++S++W+++I+G VQN L++
Sbjct: 204 GIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 263
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 163
A+ F EM +A + + +++ L G QLH +K+ + D I+ + +
Sbjct: 264 LALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 323
Query: 164 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 223
MYAKC + D+ +F N ++ S+N+MI G S +AL ++ ++ GL D +
Sbjct: 324 DMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 383
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNS 251
+ GV ACA + +G +++ + S
Sbjct: 384 SLSGVFRACALVKGLSEGLQIYGLAIKS 411
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 159/384 (41%), Gaps = 75/384 (19%)
Query: 18 NLNNFDDQSLNSMINGYVQAGQLEKAQELF----------DTVPIRNKIAWTCMISGYLS 67
N N + QS N+MI GY Q KA LF D + + ++ G
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 68 AGQVF-----------------------------KACDLFDSMPDRDSIAWTSMISGYVQ 98
Q++ +A +FD M RD+++W ++I+ + Q
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 99 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM--GSVAYLDQGRQLHGMQVKTIYEYDL 156
N E + LF M+ P TF + A GS+ Y G ++H VK+ +
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY---GMEIHSSIVKSGMASNS 517
Query: 157 ILENSLVSMYAKCGEIDDSYRIFSNMAYRDK--------------------ISWNSMIMG 196
+ SL+ MY+KCG I+++ +I S R +SWNS+I G
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
++ +A ++ M+E G+ PD T+ VL CA+ G ++ ++ LQ
Sbjct: 578 YVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQS 636
Query: 257 GFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT-DADVASRA 313
D YI +++++ + G + D+ + + + W A+ +CG + + A +
Sbjct: 637 --DVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAM--ICGYAHHGKGEEAIQL 691
Query: 314 TKRLLELDPLNAPGHVALCNIYAA 337
+R++ L+ + P HV +I A
Sbjct: 692 FERMI-LENIK-PNHVTFISILRA 713
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 155 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 214
D++ N +++ Y+K ++ + F+ M RD +SWNSM+ G +G + +++ V+ M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 215 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV 274
G+ D TF +L C+ G ++ + +V G +++++ + +
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQI-HGIVVRVGCDTDVVAASALLDMYAKGKRF 231
Query: 275 KDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA 325
++ +P E N W A++ C ++ S A K E+ +NA
Sbjct: 232 VESLRVFQGIP-EKNSVSWSAIIAGC----VQNNLLSLALKFFKEMQKVNA 277
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 226/360 (62%), Gaps = 7/360 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N+MI+ YV+ ++ A+++FD +P R+ I+WT +I+ Y G + A +LF+S+P +D +
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA---MGSVAYLDQGRQLH 144
AWT+M++G+ QN EA+ F M G T A A +G+ Y D+ Q+
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+ ++ +++ ++L+ MY+KCG ++++ +F +M ++ +++SMI+GL+ HGRA
Sbjct: 308 QKSGYSPSDH-VVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 205 EALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
EAL ++ M+ + + P+TVTF+G L AC+H+GLVD+G ++F+SM ++G+QP DHY
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC 426
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+++LLGR G++++A E + + VEP+ +WGAL+G C + + ++A A + L EL+P
Sbjct: 427 MVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRI-HNNPEIAEIAAEHLFELEPD 485
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK-GRVHVFSSGDRLEP 382
++ L N+YA+ + +RK ++ KG++K P SW++ K G++H F G+ P
Sbjct: 486 IIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHP 545
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 36/228 (15%)
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
R+ WT++I GY EAI+++G M +P++ TF+ L A G++ L+ GRQ
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS-------------- 189
H + + + N+++ MY KC ID + ++F M RD IS
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 190 -----------------WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
W +M+ G + + + EAL ++ M + G+ D VT G ++AC
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYI---SIINLLGRAGKVKDA 277
A G K + + G P DH + ++I++ + G V++A
Sbjct: 292 AQLG-ASKYADRAVQIAQKSGYSPS-DHVVIGSALIDMYSKCGNVEEA 337
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 207/351 (58%), Gaps = 1/351 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS+++ Y G + A +F + R+ ++WT M++GY G V A ++FD MP R+
Sbjct: 156 NSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLF 215
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W+ MI+GY +N +AI LF M G + + + L+ G + +
Sbjct: 216 TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYV 275
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
VK+ +LIL +LV M+ +CG+I+ + +F + D +SW+S+I GL+ HG A +A+
Sbjct: 276 VKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAM 335
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+ M+ G P VTF VL+AC+H GLV+KG E++ +M +G++P +HY I+++
Sbjct: 336 HYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDM 395
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LGRAGK+ +AE F+L++ V+PN I GAL+G C + K + +VA R L+++ P ++
Sbjct: 396 LGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK-NTEVAERVGNMLIKVKPEHSGY 454
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
+V L NIYA + ++ SLR M+ K V+K PG S I + G+++ F+ GD
Sbjct: 455 YVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGD 505
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 107/252 (42%), Gaps = 33/252 (13%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+F + + + + +I + ++A + +M+ P N TF L A +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
+ G Q H V+ ++ D+ +ENSLV MYA CG I + RIF M +RD +SW SM+ G
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 197 LSDHGRA-------------------------------SEALTVYETMLEFGLYPDTVTF 225
G +A+ ++E M G+ +
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+ V+++CAH G ++ G + +V S+ + +++++ R G ++ A LP
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 286 VEPNHAIWGALV 297
E + W +++
Sbjct: 312 -ETDSLSWSSII 322
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 252 bits (643), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 210/364 (57%), Gaps = 3/364 (0%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP--D 83
S N+M++GY + ++ KA ELF+ +P RN ++W+ M+ GY AG + A +FD MP
Sbjct: 218 SWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA 277
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
++ + WT +I+GY + L+ EA L +M+A G + A L G ++
Sbjct: 278 KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRI 337
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
H + ++ + + N+L+ MYAKCG + ++ +F+++ +D +SWN+M+ GL HG
Sbjct: 338 HSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHG 397
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
EA+ ++ M G+ PD VTF+ VL +C HAGL+D+G + F SM Y L P +HY
Sbjct: 398 KEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGC 457
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+++LLGR G++K+A + V +P+EPN IWGAL+G C + + D+A L++LDP
Sbjct: 458 LVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRM-HNEVDIAKEVLDNLVKLDPC 516
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 383
+ + L NIYAA + + +R +M+ GV K G S + ++ +H F+ D+ P
Sbjct: 517 DPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPK 576
Query: 384 VEDI 387
+ I
Sbjct: 577 SDQI 580
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS Q A +F+ + + + S+I + QN +A +F EM G
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFAD 116
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG--EIDDSYRI 178
N T+ L A ++L + +H K D+ + N+L+ Y++CG + D+ ++
Sbjct: 117 NFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL 176
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M+ RD +SWNSM+ GL G +A +++ M + D +++ +L A +
Sbjct: 177 FEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQ----RDLISWNTMLDGYARCREM 232
Query: 239 DKGWELFNSM 248
K +ELF M
Sbjct: 233 SKAFELFEKM 242
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 93/198 (46%), Gaps = 17/198 (8%)
Query: 131 MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISW 190
+ A L+Q +QLH ++ DL + L+S + C + + + R+F+ + +
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
NS+I + + + +A V+ M FGL+ D T+ +L AC+ + W M++
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACS-----GQSWLPVVKMMH 140
Query: 251 SYGLQPGF--DHYI--SIINLLGRAG--KVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
++ + G D Y+ ++I+ R G V+DA + ++ E + W +++G GL K
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLG--GLVK 197
Query: 305 TDADVASRATKRLLELDP 322
R +RL + P
Sbjct: 198 AG---ELRDARRLFDEMP 212
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 251 bits (641), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 203/335 (60%), Gaps = 3/335 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ ++ Y AGQ+ +A ++F+ +P+RD ++ T++I+GY Q L EA+ +F + + G S
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T+A L A+ +A LD G+Q H ++ + +L+NSL+ MY+KCG + + R+
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRL 311
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGL 237
F NM R ISWN+M++G S HG E L ++ M E + PD VT L VL+ C+H +
Sbjct: 312 FDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRM 371
Query: 238 VDKGWELFNSMV-NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
D G +F+ MV YG +PG +HY I+++LGRAG++ +A EF+ R+P +P + G+L
Sbjct: 372 EDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSL 431
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+G C + + D+ +RL+E++P NA +V L N+YA+ R ++ ++R M K V
Sbjct: 432 LGACRVHLS-VDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAV 490
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
K PG SWI + +H F + DR P E++L ++
Sbjct: 491 TKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKM 525
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 119/228 (52%), Gaps = 10/228 (4%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A + D MP+++ ++WT+MIS Y Q +EA+++F EMM P TFA + +
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
+ L G+Q+HG+ VK Y+ + + +SL+ MYAK G+I ++ IF + RD +S ++
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I G + G EAL ++ + G+ P+ VT+ +LTA + L+D G + + +
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ-----AHCHV 280
Query: 254 LQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
L+ Y S+I++ + G + A +P E W A++
Sbjct: 281 LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAML 327
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAI---SLFG-EMMAHGFSPLNGTFAVLFGAMGS 133
F S P + IS N + EA+ ++ G EM HG+ A+L +
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYD------ALLNACLDK 65
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
A D G+++H +KT Y L L+ Y KC ++D+ ++ M ++ +SW +M
Sbjct: 66 RALRD-GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAM 124
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I S G +SEALTV+ M+ P+ TF VLT+C A + G ++ +V
Sbjct: 125 ISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV---- 180
Query: 254 LQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLP 285
+ +D +I S++++ +AG++K+A E LP
Sbjct: 181 -KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR--- 84
NS+I+ Y + G L A+ LFD +P R I+W M+ GY G + +LF M D
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 85 --DSIAWTSMISGYVQNELIAEAISLFGEMMA--HGFSPLNGTFAVLFGAMGSVAYLDQG 140
D++ +++SG + +++F M+A +G P + + +G +D+
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 251 bits (640), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 208/364 (57%), Gaps = 7/364 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACD-LFDSMPDRDS 86
N+MI+GY++ G + +A+ LFD +P R+ ++W ++ GY + G + +AC+ +FD MP+R+
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDM-EACERVFDDMPERNV 152
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+W +I GY QN ++E + F M+ G P + T ++ A + D G+ +H
Sbjct: 153 FSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHK 212
Query: 146 MQVKTIY-EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
Y + D+ ++N+L+ MY KCG I+ + +F + RD ISWN+MI GL+ HG +
Sbjct: 213 YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
EAL ++ M G+ PD VTF+GVL AC H GLV+ G FNSM + + P +H +
Sbjct: 273 EALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCV 332
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
++LL RAG + A EF+ ++PV+ + IW L+G + K D+ A + L++L+P N
Sbjct: 333 VDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKK-VDIGEVALEELIKLEPRN 391
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV-KGRVHVFSSGDRLEPH 383
V L NIY R + L+ MR G +K G SWI G V +SSG++ P
Sbjct: 392 PANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEK-HPR 450
Query: 384 VEDI 387
E++
Sbjct: 451 TEEL 454
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 50/248 (20%)
Query: 38 GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYV 97
G + A ++F + +N + WT MI+GYL + A FD P+RD + W +MISGY+
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 98 QNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLI 157
+ + EA SLF +M D++
Sbjct: 102 EMGNMLEARSLFDQMPCR---------------------------------------DVM 122
Query: 158 LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG 217
N+++ YA G+++ R+F +M R+ SWN +I G + +GR SE L ++ M++ G
Sbjct: 123 SWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEG 182
Query: 218 -LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI-----SIINLLGRA 271
+ P+ T VL+ACA G D F V+ YG G++ ++I++ G+
Sbjct: 183 SVVPNDATMTLVLSACAKLGAFD-----FGKWVHKYGETLGYNKVDVNVKNALIDMYGKC 237
Query: 272 GKVKDAEE 279
G ++ A E
Sbjct: 238 GAIEIAME 245
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 210/367 (57%), Gaps = 8/367 (2%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
S++N Y G L AQ +FD ++ AW +++ Y AG + A LFD MP+R+ I
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVI 160
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHG-----FSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+W+ +I+GYV EA+ LF EM P T + + A G + L+QG+
Sbjct: 161 SWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKW 220
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHG 201
+H K E D++L +L+ MYAKCG ++ + R+F+ + + +D ++++MI L+ +G
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
Query: 202 RASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
E ++ M + P++VTF+G+L AC H GL+++G F M+ +G+ P H
Sbjct: 281 LTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQH 340
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
Y +++L GR+G +K+AE F+ +P+EP+ IWG+L+ + D A KRL+EL
Sbjct: 341 YGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML-GDIKTCEGALKRLIEL 399
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRL 380
DP+N+ +V L N+YA R +E+ +R EM +KG+ K PGCS++ V+G VH F GD
Sbjct: 400 DPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDES 459
Query: 381 EPHVEDI 387
+ E I
Sbjct: 460 QQESERI 466
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 40/234 (17%)
Query: 85 DSIAWTSMISGYVQNELIAE---AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+S W +I V N + IS++ M H SP TF L + + +L G+
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGE------------------------------ 171
+ H + + D + SL++MY+ CG+
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 172 -IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-----EFGLYPDTVTF 225
IDD+ ++F M R+ ISW+ +I G G+ EAL ++ M E + P+ T
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
VL+AC G +++G + ++ ++ Y ++ ++I++ + G ++ A+
Sbjct: 203 STVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKR 255
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/329 (35%), Positives = 198/329 (60%), Gaps = 2/329 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ ++ Y G + A +FD++ R+ ++W ++I+G+ + +A+ LF M+ GF
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFR 259
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + ++A LFGA S +L+QG+ +H +K+ + N+L+ MYAK G I D+ +I
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKI 319
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F +A RD +SWNS++ + HG EA+ +E M G+ P+ ++FL VLTAC+H+GL+
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLL 379
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
D+GW + M G+ P HY+++++LLGRAG + A F+ +P+EP AIW AL+
Sbjct: 380 DEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C + K + ++ + A + + ELDP + HV L NIYA+ R + +RK+M+ GV+K
Sbjct: 439 ACRMHK-NTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDI 387
P CSW+ ++ +H+F + D P E+I
Sbjct: 498 EPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 146/283 (51%), Gaps = 7/283 (2%)
Query: 7 LMDYASNALEGNLNNFDDQSLNSMING-----YVQAGQLEKAQELFDTVPIRNKIAWTCM 61
L+ +SN LEG+ D + N+++ + G++ A + ++ + + +
Sbjct: 43 LLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAH-ILQSIFRHDIVMGNTL 101
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
++ Y G + +A +F+ MP RD + WT++ISGY Q++ +A+ F +M+ G+SP
Sbjct: 102 LNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNE 161
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
T + + A + G QLHG VK ++ ++ + ++L+ +Y + G +DD+ +F
Sbjct: 162 FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 221
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
+ R+ +SWN++I G + +AL +++ ML G P ++ + AC+ G +++G
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 242 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
+ M+ S F +++++ ++G + DA + RL
Sbjct: 282 KWVHAYMIKSGEKLVAFAGN-TLLDMYAKSGSIHDARKIFDRL 323
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 101/262 (38%), Gaps = 45/262 (17%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRN------ 54
+Y+ +GLMD A + L + +D S N++I G+ + EKA ELF + +R+
Sbjct: 205 LYTRYGLMDDAQLVFDA-LESRNDVSWNALIAGHARRSGTEKALELFQGM-LRDGFRPSH 262
Query: 55 ----------------------------------KIAWTCMISGYLSAGQVFKACDLFDS 80
A ++ Y +G + A +FD
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+ RD ++W S+++ Y Q+ EA+ F EM G P +F + A LD+G
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS-WNSMIMGLSD 199
+ + K + ++V + + G+++ + R M + W +++
Sbjct: 383 WHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 442
Query: 200 HGRASEALTVYETMLEFGLYPD 221
H + L Y F L PD
Sbjct: 443 H--KNTELGAYAAEHVFELDPD 462
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 209/345 (60%), Gaps = 3/345 (0%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
DD + ++++ YV++G+LE A+ +F+T+ N + T MISGY++ G V A ++F++
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 82 PDRDSIAWTSMISGYVQN-ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+D + + +M+ G+ ++ E ++ ++ M GF P TFA + GA + + G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+Q+H +K+ + + +SL+ MYAKCG I+D+ R+F M ++ SW SMI G +
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G EAL ++ M EF + P+ VTFLG L+AC+H+GLVDKG+E+F SM Y ++P +H
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
Y I++L+GRAG + A EF +P P+ IW AL+ C L + ++AS A L +L
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNL-HGNVELASIAASELFKL 471
Query: 321 DPLNAPG-HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
+ PG ++AL N+YA+ND+ ++ +R+ M+ + + K G SW
Sbjct: 472 NADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 70/309 (22%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
+L G + A +FD +P A+ MISGY+++ L+ E + L M G T
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 125 AVLFGA---MGSVAYLDQG--RQLHGMQVKTIYEYDLILENSLVSMYAKCGE-------- 171
+++ A GS L + R +H +K E D +L +LV Y K G+
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVF 198
Query: 172 -----------------------IDDSYRIFSNMAYRDKISWNSMIMGLSDHGR-ASEAL 207
++D+ IF+ +D + +N+M+ G S G A ++
Sbjct: 199 ETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSV 258
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACA-----------HAGLVDKG----WELFNSMVNSY 252
+Y +M G +P+ TF V+ AC+ HA ++ G ++ +S+++ Y
Sbjct: 259 DMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Query: 253 GLQPG-------FDH--------YISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWG 294
G FD + S+I+ G+ G ++A E R+ +EPN+ +
Sbjct: 319 AKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFL 378
Query: 295 ALVGVCGLS 303
+ C S
Sbjct: 379 GALSACSHS 387
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 222/396 (56%), Gaps = 8/396 (2%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSL---NSMINGYVQAGQLEKAQELFDTVPIRNKIA 57
MY+ G + +A E + + +S+ N +INGY +A + A LF ++P RN +
Sbjct: 170 MYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGS 229
Query: 58 WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF 117
W+ +I GY+ +G++ +A LF+ MP+++ ++WT++I+G+ Q AIS + EM+ G
Sbjct: 230 WSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGL 289
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P T A + A L G ++HG + + D + +LV MYAKCGE+D +
Sbjct: 290 KPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAAT 349
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+FSNM ++D +SW +MI G + HGR +A+ + M+ G PD V FL VLTAC ++
Sbjct: 350 VFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSE 409
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
VD G F+SM Y ++P HY+ +++LLGRAGK+ +A E V +P+ P+ W AL
Sbjct: 410 VDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALY 469
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA--NDRHIELTSLRKEMRIKG 355
C K A ++ LLELDP ++ L +A+ N + +E L + RIK
Sbjct: 470 RACKAHK-GYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIK- 527
Query: 356 VRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
++ G S+I + G+++ FS+GD ++I L++
Sbjct: 528 -ERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKL 562
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 93/246 (37%), Gaps = 70/246 (28%)
Query: 66 LSAGQVFKACD----LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
+S + K+ D +F + +R+ ++I G +N ++ F M+ G P
Sbjct: 67 VSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDR 126
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS- 180
TF + + + + GR LH +K + D + SLV MYAK G++ ++++F
Sbjct: 127 LTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEE 186
Query: 181 ----------------------------------NMAYRDKISWNSMIMGLSDHG---RA 203
+M R+ SW+++I G D G RA
Sbjct: 187 SPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRA 246
Query: 204 SE----------------------------ALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
+ A++ Y MLE GL P+ T VL+AC+ +
Sbjct: 247 KQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKS 306
Query: 236 GLVDKG 241
G + G
Sbjct: 307 GALGSG 312
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 248 bits (633), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 191/329 (58%), Gaps = 3/329 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ +I + G+ A +FD M D+I W S+I G+ QN A+ LF M GF
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
T + A +A L+ G Q H VK Y+ DLIL N+LV MY KCG ++D+ R+
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRV 315
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F+ M RD I+W++MI GL+ +G + EAL ++E M G P+ +T +GVL AC+HAGL+
Sbjct: 316 FNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ GW F SM YG+ P +HY +I+LLG+AGK+ DA + + + EP+ W L+G
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C + + + +A A K+++ LDP +A + L NIYA + + + +R MR +G++K
Sbjct: 436 ACRVQR-NMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKK 494
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDI 387
PGCSWI V ++H F GD P + ++
Sbjct: 495 EPGCSWIEVNKQIHAFIIGDNSHPQIVEV 523
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 3/183 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y+ + A LFD MP R+ I+WT+MIS Y + ++ +A+ L M+ P
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T++ + S + R LH +K E D+ + ++L+ ++AK GE +D+ +F
Sbjct: 162 VYTYS---SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M D I WNS+I G + + R+ AL +++ M G + T VL AC L++
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 241 GWE 243
G +
Sbjct: 279 GMQ 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 24/225 (10%)
Query: 102 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS 161
+ A+ + +HG + T++ L S + +G + + + L N
Sbjct: 42 LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNV 101
Query: 162 LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 221
L++MY K ++D++++F M R+ ISW +MI S +AL + ML + P+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 222 TVTFLGVLTAC--------AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGK 273
T+ VL +C H G++ +G E + V S ++I++ + G+
Sbjct: 162 VYTYSSVLRSCNGMSDVRMLHCGIIKEGLE-SDVFVRS-----------ALIDVFAKLGE 209
Query: 274 VKDAEEFVLRLPVEPNHAIWGALVGVCGLSK-TDADVASRATKRL 317
+DA V V + +W +++G G ++ + +DVA KR+
Sbjct: 210 PEDALS-VFDEMVTGDAIVWNSIIG--GFAQNSRSDVALELFKRM 251
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 201/339 (59%), Gaps = 7/339 (2%)
Query: 50 VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLF 109
+P+ N I GYLS + + F M D+D I W ++IS +++ +EA+ +F
Sbjct: 248 LPVMNSILDLYCRCGYLSEAKHY-----FHEMEDKDLITWNTLISELERSD-SSEALLMF 301
Query: 110 GEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
+ GF P TF L A ++A L+ G+QLHG + + ++ L N+L+ MYAKC
Sbjct: 302 QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKC 361
Query: 170 GEIDDSYRIFSNMA-YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV 228
G I DS R+F + R+ +SW SM++G HG +EA+ +++ M+ G+ PD + F+ V
Sbjct: 362 GNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAV 421
Query: 229 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEP 288
L+AC HAGLV+KG + FN M + YG+ P D Y +++LLGRAGK+ +A E V R+P +P
Sbjct: 422 LSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKP 481
Query: 289 NHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLR 348
+ + WGA++G C K + ++ A ++++EL P +V L IYAA + ++ +R
Sbjct: 482 DESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVR 541
Query: 349 KEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
K MR+ G +K G SWILV+ +V F+ D++ P+ +
Sbjct: 542 KMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSV 580
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 15/290 (5%)
Query: 51 PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFG 110
P ++ I T +I Y G V +A LFD MPDRD +AWT+MI+GY + A A F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 111 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 170
EM+ G SP T + + + ++ L G +HG+ VK E L ++N++++MYA C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 171 -EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLG 227
++ + IF ++ ++ ++W ++I G + G L +Y+ ML + P +T
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI-- 218
Query: 228 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 287
+ A A V G ++ S++ G Q SI++L R G + +A+ + + +
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-D 276
Query: 288 PNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 337
+ W L+ L ++D+ A LL + G V C + +
Sbjct: 277 KDLITWNTLIS--ELERSDSSEA------LLMFQRFESQGFVPNCYTFTS 318
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 208/362 (57%), Gaps = 2/362 (0%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
++I Y + G+ +KA+ +FD + +N + W MI GY+ +GQV A +FD MP+RD I+
Sbjct: 114 AIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLIS 173
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
WT+MI+G+V+ EA+ F EM G P A ++ L G +H +
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
++ ++ + NSL+ +Y +CG ++ + ++F NM R +SWNS+I+G + +G A E+L
Sbjct: 234 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLV 293
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
+ M E G PD VTF G LTAC+H GLV++G F M Y + P +HY +++L
Sbjct: 294 YFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLY 353
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGH 328
RAG+++DA + V +P++PN + G+L+ C + +A R K L +L+ + +
Sbjct: 354 SRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNY 413
Query: 329 VALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDIL 388
V L N+YAA+ + + +R++M+ G++K PG S I + +HVF +GD HVE
Sbjct: 414 VILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGD--NAHVETTY 471
Query: 389 LQ 390
++
Sbjct: 472 IR 473
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 43/232 (18%)
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ--GRQL 143
+++WTS I+ +N +AEA F +M G P + TF L G + G L
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 144 HGMQVKTIYEYD-LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
HG K + + +++ +++ MY+K G + +F M ++ ++WN+MI G G+
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 203 ASEALTVYETMLE-------------------------------FGLYPDTVTFLGVLTA 231
A +++ M E G+ PD V + L A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEE 279
C + G + F V+ Y L F + + S+I+L R G V+ A +
Sbjct: 216 CTNLGALS-----FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/329 (36%), Positives = 195/329 (59%), Gaps = 1/329 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G + A +F+SM D+ S+ W+SM++GYVQN+ EA+ L+
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
T + + A ++A L +G+Q+H + K+ + ++ + +S V MYAKCG + +SY I
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
FS + ++ WN++I G + H R E + ++E M + G++P+ VTF +L+ C H GLV
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++G F M +YGL P HY ++++LGRAG + +A E + +P +P +IWG+L+
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C + K + ++A A ++L EL+P NA HV L NIYAAN + E+ RK +R V+K
Sbjct: 441 SCRVYK-NLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKK 499
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDI 387
G SWI +K +VH FS G+ P + +I
Sbjct: 500 VRGKSWIDIKDKVHTFSVGESGHPRIREI 528
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 121/239 (50%), Gaps = 4/239 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y G V A +FD M +R ++W +MI Y +N + +EA+ +F EM GF
Sbjct: 102 LINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFS 161
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + + A G + ++LH + VKT + +L + +L+ +YAKCG I D+ ++F
Sbjct: 162 EFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE 221
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+M + ++W+SM+ G + EAL +Y L + T V+ AC++ + +
Sbjct: 222 SMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV-EPNHAIWGALVG 298
G ++ ++++ G S +++ + G ++ E +++ V E N +W ++
Sbjct: 282 GKQM-HAVICKSGFGSNVFVASSAVDMYAKCGSLR--ESYIIFSEVQEKNLELWNTIIS 337
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
+ + HG ++ E D+ L N L++ Y+KCG ++ + ++F M R +SWN+MI GL
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMI-GLY 137
Query: 199 DHGR-ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
R SEAL ++ M G T VL+AC G+ E S
Sbjct: 138 TRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALECKKLHCLSVKTCID 194
Query: 258 FDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG--VCGLSKTDADVASRA 313
+ Y+ ++++L + G +KDA + V + + W ++V V + +A + R
Sbjct: 195 LNLYVGTALLDLYAKCGMIKDAVQ-VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Query: 314 TKRL-LELDPLNAPGHVALCNIYAA 337
+R+ LE + + C+ AA
Sbjct: 254 AQRMSLEQNQFTLSSVICACSNLAA 278
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 194/324 (59%), Gaps = 2/324 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGT 123
Y G + +A +F M +D I+W ++I GY +N EA+SLF ++ FSP T
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
A + A S++ D+GR++HG ++ Y D + NSLV MYAKCG + ++ +F ++A
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
+D +SW MI G HG EA+ ++ M + G+ D ++F+ +L AC+H+GLVD+GW
Sbjct: 562 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWR 621
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 303
FN M + ++P +HY I+++L R G + A F+ +P+ P+ IWGAL+ C +
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Query: 304 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
D +A + +++ EL+P N +V + NIYA ++ ++ LRK + +G+RK PGCS
Sbjct: 682 H-DVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 364 WILVKGRVHVFSSGDRLEPHVEDI 387
WI +KGRV++F +GD P E+I
Sbjct: 741 WIEIKGRVNIFVAGDSSNPETENI 764
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 9/255 (3%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
RN + +++ YL +V A +FD M +RD I+W S+I+GYV N L + +S+F +M
Sbjct: 229 RNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQM 287
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ G T +F + GR +H + VK + + N+L+ MY+KCG++
Sbjct: 288 LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
D + +F M+ R +S+ SMI G + G A EA+ ++E M E G+ PD T VL C
Sbjct: 348 DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNH 290
A L+D+G + + + GFD ++S ++++ + G +++AE + V+ +
Sbjct: 408 ARYRLLDEGKRVHEWIKEN---DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DI 463
Query: 291 AIWGALVGVCGLSKT 305
W ++G G SK
Sbjct: 464 ISWNTIIG--GYSKN 476
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 140/292 (47%), Gaps = 51/292 (17%)
Query: 26 SLNSMINGYVQAGQLEKAQELF----------DTVPIRNKIAWTCMISGYLSAGQVF--- 72
S NS+INGYV G EK +F D I + A C S +S G+
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA-GCADSRLISLGRAVHSI 321
Query: 73 --KAC-------------------DL------FDSMPDRDSIAWTSMISGYVQNELIAEA 105
KAC DL F M DR +++TSMI+GY + L EA
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
+ LF EM G SP T + LD+G+++H + +D+ + N+L+ M
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY-PDTVT 224
YAKCG + ++ +FS M +D ISWN++I G S + A+EAL+++ +LE + PD T
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAG 272
VL ACA DKG E ++ Y ++ G+ D ++ S++++ + G
Sbjct: 502 VACVLPACASLSAFDKGRE-----IHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 5/204 (2%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y + G + +A +FD + ++ W +++ ++ + +I LF +MM+ G + TF
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ + + S+ + G QLHG +K+ + + NSLV+ Y K +D + ++F M
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
RD ISWNS+I G +G A + L+V+ ML G+ D T + V CA + L+ G
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG--- 315
Query: 245 FNSMVNSYGLQPGFDHYISIINLL 268
V+S G++ F N L
Sbjct: 316 --RAVHSIGVKACFSREDRFCNTL 337
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y G + A LFD + +D ++WT MI+GY + EAI+LF +M G
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 599
Query: 121 NGTFAVLFGAMGSVAYLDQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+F L A +D+G R + M+ + E + +V M A+ G++ +YR
Sbjct: 600 EISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFI 659
Query: 180 SNMAY-RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
NM D W +++ G H A V E + E L P+ +
Sbjct: 660 ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE--LEPENTGY 704
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 244 bits (622), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 197/324 (60%), Gaps = 3/324 (0%)
Query: 70 QVFKACDL-FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
++F+ +L F S+P R +++WT++ISGYVQ L + LF +M TFA +
Sbjct: 400 EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVL 459
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
A S A L G+QLH +++ ++ + LV MYAKCG I D+ ++F M R+ +
Sbjct: 460 KASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 519
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
SWN++I +D+G A+ + M+E GL PD+V+ LGVLTAC+H G V++G E F +M
Sbjct: 520 SWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAM 579
Query: 249 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 308
YG+ P HY +++LLGR G+ +AE+ + +P EP+ +W +++ C + K +
Sbjct: 580 SPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQS- 638
Query: 309 VASRATKRLLELDPL-NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 367
+A RA ++L ++ L +A +V++ NIYAA ++ ++K MR +G++K P SW+ V
Sbjct: 639 LAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEV 698
Query: 368 KGRVHVFSSGDRLEPHVEDILLQI 391
++HVFSS D+ P+ ++I+ +I
Sbjct: 699 NHKIHVFSSNDQTHPNGDEIVRKI 722
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N ++ ++ GQ+ A++++D +P +N ++ MISG++ G V A DLFD+MPDR +
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVV 111
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFS--PLNGTFAVLFGAMGSVAYLDQGRQLHG 145
WT ++ Y +N EA LF +M P + TF L + Q+H
Sbjct: 112 TWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHA 171
Query: 146 MQVKTIYEYD--LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
VK ++ + L + N L+ Y + +D + +F + +D +++N++I G G
Sbjct: 172 FAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLY 231
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTA 231
+E++ ++ M + G P TF GVL A
Sbjct: 232 TESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 2/234 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y +V + LFD MP+ D +++ +IS Y Q + ++ F EM GF N F
Sbjct: 295 YSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPF 354
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A + +++ L GRQLH + + L + NSLV MYAKC +++ IF ++
Sbjct: 355 ATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
R +SW ++I G G L ++ M L D TF VL A A + G +L
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL 474
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++ S L+ F ++++ + G +KDA + +P + N W AL+
Sbjct: 475 HAFIIRSGNLENVFSGS-GLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALIS 526
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%), Gaps = 12/256 (4%)
Query: 47 FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAI 106
FDT P ++ Y ++ AC LF+ +P++DS+ + ++I+GY ++ L E+I
Sbjct: 178 FDTNPFLT--VSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 107 SLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMY 166
LF +M G P + TF+ + A+ + G+QLH + V T + D + N ++ Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 167 AKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFL 226
+K + ++ +F M D +S+N +I S + +L + M G F
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA 355
Query: 227 GVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVL 282
+L+ A+ + G +L + L D + S++++ + ++AE
Sbjct: 356 TMLSIAANLSSLQMGRQL-----HCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFK 410
Query: 283 RLPVEPNHAIWGALVG 298
LP + W AL+
Sbjct: 411 SLP-QRTTVSWTALIS 425
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 52 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
+ N + + ++ Y G + A +F+ MPDR++++W ++IS + N AI F +
Sbjct: 484 LENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAK 543
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ-------LHGMQVKTIYEYDLILENSLVS 164
M+ G P + + + A +++QG + ++G+ K + Y +L+
Sbjct: 544 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH-YACMLD----- 597
Query: 165 MYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 223
+ + G ++ ++ M + D+I W+S++ H S A E + D
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAA 657
Query: 224 TFLGVLTACAHAGLVDKGWELFNSM 248
++ + A AG +K ++ +M
Sbjct: 658 AYVSMSNIYAAAGEWEKVRDVKKAM 682
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/334 (37%), Positives = 195/334 (58%), Gaps = 1/334 (0%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R+ A T ++ Y AG + A FD + +RD WTS+ISGYVQN EA+ L+ M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
G P + T A + A S+A L+ G+Q+HG +K + ++ + ++L +MY+KCG +
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSL 474
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+D +F +D +SWN+MI GLS +G+ EAL ++E ML G+ PD VTF+ +++AC
Sbjct: 475 EDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISAC 534
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
+H G V++GW FN M + GL P DHY +++LL RAG++K+A+EF+ ++ +
Sbjct: 535 SHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCL 594
Query: 293 WGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMR 352
W L+ C + ++ A ++L+ L + +V L IY A R ++ + K MR
Sbjct: 595 WRILLSACK-NHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMR 653
Query: 353 IKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVED 386
GV K GCSWI +K + HVF GD + P +E+
Sbjct: 654 ANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEE 687
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 6/244 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y + +AC +FDS DR+SI W++M++GY QN EA+ LF M + G P
Sbjct: 262 LVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPS 321
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + A + YL++G+QLH +K +E L +LV MYAK G + D+ + F
Sbjct: 322 EYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFD 381
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ RD W S+I G + EAL +Y M G+ P+ T VL AC+ ++
Sbjct: 382 CLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLEL 441
Query: 241 GWELF-NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
G ++ +++ + +GL+ +S + + G ++D R P + W A++
Sbjct: 442 GKQVHGHTIKHGFGLEVPIGSALS--TMYSKCGSLEDGNLVFRRTP-NKDVVSWNAMIS- 497
Query: 300 CGLS 303
GLS
Sbjct: 498 -GLS 500
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 135/245 (55%), Gaps = 12/245 (4%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF- 117
T ++ Y AG V +F MP+R++ W++M+SGY + EAI +F +
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 118 -SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
S + F + ++ + Y+ GRQ+H + +K + L N+LV+MY+KC ++++
Sbjct: 217 GSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEAC 276
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
++F + R+ I+W++M+ G S +G + EA+ ++ M G+ P T +GVL AC+
Sbjct: 277 KMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDIC 336
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
+++G +L +S+ L+ GF+ ++ +++++ +AG + DA + L E + A+
Sbjct: 337 YLEEGKQL-----HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDVAL 390
Query: 293 WGALV 297
W +L+
Sbjct: 391 WTSLI 395
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEA---ISLFGEMMAHGF 117
+++ Y G++ KA +F+++ +D ++W S+I+GY QN I+ + + LF EM A
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P T A +F A S+ GRQ H + VK D+ ++ SLV MY K G ++D +
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML---EFGLYPDTVTFLGVLTACA 233
+F+ M R+ +W++M+ G + GR EA+ V+ L E G D V F VL++ A
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLA 232
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L GR +HG ++T + N LV+ YAKCG++ ++ IF+ + +D +SWNS+I G
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 197 LSDHGRASEALTVYETMLEF---GLYPDTVTFLGVLTACA--HAGLVDKGWELFNSMVNS 251
S +G S + TV + E + P+ T G+ A + + V + ++S
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS 149
Query: 252 YGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+G D Y+ S++ + +AG V+D + +P E N W +V
Sbjct: 150 FG-----DIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMV 191
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 228/430 (53%), Gaps = 45/430 (10%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRN-KI---- 56
YS GL+ A + G D+ S NSMI Y Q + KA L+ + + KI
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 57 ------AWTCM---ISGYLSAGQVFKA---------------------CD-------LFD 79
A T + I G G++ KA CD +F
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 80 SMPDRDSIAWTSMISGYVQNE-LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ D + W +MISGY NE L EA+ F +M G P + +F + A +++
Sbjct: 303 EILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS 362
Query: 139 QGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
Q +Q+HG+ +K+ I + + N+L+S+Y K G + D+ +F M + +S+N MI G
Sbjct: 363 QCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGY 422
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+ HG +EAL +Y+ ML+ G+ P+ +TF+ VL+ACAH G VD+G E FN+M ++ ++P
Sbjct: 423 AQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE 482
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
+HY +I+LLGRAGK+++AE F+ +P +P W AL+G C K A +A RA L
Sbjct: 483 AEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMA-LAERAANEL 541
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG 377
+ + PL A +V L N+YA + E+ S+RK MR K +RK PGCSWI VK + HVF +
Sbjct: 542 MVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAE 601
Query: 378 DRLEPHVEDI 387
D P + ++
Sbjct: 602 DWSHPMIREV 611
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 139/305 (45%), Gaps = 24/305 (7%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N +N Y + G+L A+ F + N ++ ++ Y ++ A LFD +P D++
Sbjct: 47 NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTV 106
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
++ ++ISGY A+ LF M GF T + L A +D +QLH
Sbjct: 107 SYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA--CCDRVDLIKQLHCFS 164
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHGRASEA 206
V ++ + N+ V+ Y+K G + ++ +F M RD++SWNSMI+ H ++A
Sbjct: 165 VSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKA 224
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACA-----------HAGLVDKGWELFNSMVNSYGLQ 255
L +Y+ M+ G D T VL A H L+ G+ NS V S GL
Sbjct: 225 LALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ-NSHVGS-GL- 281
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 315
I + G + D+E+ V + + P+ +W ++ +++ ++ A ++ +
Sbjct: 282 ------IDFYSKCGGCDGMYDSEK-VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFR 334
Query: 316 RLLEL 320
++ +
Sbjct: 335 QMQRI 339
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 203/349 (58%), Gaps = 3/349 (0%)
Query: 18 NLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDL 77
+ + D S N+MI+GYV ++E A LF +P R+ +W M+SGY S G V A
Sbjct: 306 QMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHY 365
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
F+ P++ +++W S+I+ Y +N+ EA+ LF M G P T L A + L
Sbjct: 366 FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL 425
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY-RDKISWNSMIMG 196
G Q+H + VKT+ D+ + N+L++MY++CGEI +S RIF M R+ I+WN+MI G
Sbjct: 426 RLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG 484
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ HG ASEAL ++ +M G+YP +TF+ VL ACAHAGLVD+ F SM++ Y ++P
Sbjct: 485 YAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEP 544
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
+HY S++N+ G+ ++A + +P EP+ +WGAL+ C + + +A A +
Sbjct: 545 QMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIY-NNVGLAHVAAEA 603
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
+ L+P ++ +V L N+YA E + +R M K ++K G SW+
Sbjct: 604 MSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 169/383 (44%), Gaps = 62/383 (16%)
Query: 23 DDQSLNSMINGYVQAGQ---LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFD 79
D + N+MI+GYV G LE+A++LFD +P R+ +W MISGY ++ +A LF+
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFE 160
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG----------------- 122
MP+R++++W++MI+G+ QN + A+ LF +M SPL
Sbjct: 161 KMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWV 220
Query: 123 -------------------TFAVLFGAMGSV----AYLDQGRQL----HGMQVKTIYEYD 155
T V +G G V DQ L HG + + + +
Sbjct: 221 LGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKN 280
Query: 156 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 215
++ NS++ Y K G++ + +F M RD ISWN+MI G R +A ++ M
Sbjct: 281 VVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN 340
Query: 216 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 275
D ++ +++ A G V+ F + + + SII + K
Sbjct: 341 ----RDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-----WNSIIAAYEKNKDYK 391
Query: 276 DAEEFVLRLPVE---PN-HAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVAL 331
+A + +R+ +E P+ H + L GL + + + + +++ + P H AL
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSLLSASTGL--VNLRLGMQMHQIVVKTVIPDVPVHNAL 449
Query: 332 CNIYAANDRHIELTSLRKEMRIK 354
+Y+ +E + EM++K
Sbjct: 450 ITMYSRCGEIMESRRIFDEMKLK 472
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 43/263 (16%)
Query: 25 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 84
++ N +N +++G + +A+++F+ + RN + W MISGY+ ++ +A LFD MP R
Sbjct: 41 RATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR 100
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D + W +MISGYV + G + +L++ R+L
Sbjct: 101 DVVTWNTMISGYV--------------------------------SCGGIRFLEEARKL- 127
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+ D N+++S YAK I ++ +F M R+ +SW++MI G +G
Sbjct: 128 ---FDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVD 184
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL--FNSMVNSYGLQPGFDHYI 262
A+ ++ M P G++ + L + W L + S+V+ G + Y
Sbjct: 185 SAVVLFRKMPVKDSSPLCALVAGLIK---NERLSEAAWVLGQYGSLVS--GREDLVYAYN 239
Query: 263 SIINLLGRAGKVKDAEEFVLRLP 285
++I G+ G+V+ A ++P
Sbjct: 240 TLIVGYGQRGQVEAARCLFDQIP 262
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 210/369 (56%), Gaps = 1/369 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D L +++ Y AG ++ A+E F + +RN T M+SGY G++ A +FD
Sbjct: 246 DTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+D + WT+MIS YV+++ EA+ +F EM G P + + A ++ LD+ +
Sbjct: 306 KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKW 365
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H E +L + N+L++MYAKCG +D + +F M R+ +SW+SMI LS HG
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGE 425
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
AS+AL+++ M + + P+ VTF+GVL C+H+GLV++G ++F SM + Y + P +HY
Sbjct: 426 ASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYG 485
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+++L GRA +++A E + +PV N IWG+L+ C + + ++ A KR+LEL+P
Sbjct: 486 CMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRI-HGELELGKFAAKRILELEP 544
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
+ V + NIYA R ++ ++R+ M K V K G S I G+ H F GD+
Sbjct: 545 DHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHK 604
Query: 383 HVEDILLQI 391
+I ++
Sbjct: 605 QSNEIYAKL 613
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y S G++ A ++FD M RD + W +MI Y + L+ EA LF EM P
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA----------------- 167
+ A G + R ++ ++ D L +LV+MYA
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
Query: 168 --------------KCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM 213
KCG +DD+ IF +D + W +MI + EAL V+E M
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 214 LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGK 273
G+ PD V+ V++ACA+ G++DK + +S ++ GL+ ++IN+ + G
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 274 VKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 311
+ + ++P N W +++ + +D S
Sbjct: 395 LDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALS 431
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Query: 74 ACDLFDSMPDR-DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAM 131
A ++F S+P +SI + + ++ A LF + + H L+ +F + A+
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSE-PRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
V+ L +G +LHG+ K D +E + MYA CG I+ + +F M++RD ++WN
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
+MI G EA ++E M + + PD + +++AC G + ++ ++ +
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV 286
++ +++ + AG + A EF ++ V
Sbjct: 242 -DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 194/333 (58%), Gaps = 1/333 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ +I Y + A +FD M ++ ++WT+M+ GY Q EA+ +F +M G
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + T A +V+ L++G Q HG + + + + + NSLV++Y KCG+IDDS R+
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F+ M RD +SW +M+ + GRA E + +++ M++ GL PD VT GV++AC+ AGLV
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+KG F M + YG+ P HY +I+L R+G++++A F+ +P P+ W L+
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C +K + ++ A + L+ELDP + G+ L +IYA+ + + LR+ MR K V+K
Sbjct: 549 AC-RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKK 607
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
PG SWI KG++H FS+ D P+++ I ++
Sbjct: 608 EPGQSWIKWKGKLHSFSADDESSPYLDQIYAKL 640
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 136/268 (50%), Gaps = 11/268 (4%)
Query: 34 YVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMI 93
Y G + A+++F + RN + + ++ G L+ G + A LF M ++DS++W +MI
Sbjct: 184 YANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMI 242
Query: 94 SGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 153
G QN L EAI F EM G F + A G + +++G+Q+H ++T ++
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302
Query: 154 YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM 213
+ + ++L+ MY KC + + +F M ++ +SW +M++G GRA EA+ ++ M
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 214 LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLG 269
G+ PD T ++ACA+ +++G + + S G HY+ S++ L G
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS-----GLIHYVTVSNSLVTLYG 417
Query: 270 RAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ G + D+ + V + W A+V
Sbjct: 418 KCGDIDDSTRLFNEMNVR-DAVSWTAMV 444
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 117/256 (45%), Gaps = 33/256 (12%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ Y A+ +FD +P N +W ++ Y AG + + F+ +PDRD +
Sbjct: 45 NNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGV 104
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGM 146
W +I GY + L+ A+ + MM + L T + S ++ G+Q+HG
Sbjct: 105 TWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQ 164
Query: 147 QVKTIYEYDLILENSLVSMYAK-------------------------------CGEIDDS 175
+K +E L++ + L+ MYA CG I+D+
Sbjct: 165 VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDA 224
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
++F M +D +SW +MI GL+ +G A EA+ + M GL D F VL AC
Sbjct: 225 LQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGL 283
Query: 236 GLVDKGWELFNSMVNS 251
G +++G ++ ++ +
Sbjct: 284 GAINEGKQIHACIIRT 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/210 (18%), Positives = 86/210 (40%), Gaps = 40/210 (19%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS++ Y + G ++ + LF+ + +R+ ++WT M+S Y G+ + LFD
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFD-------- 461
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+M+ HG P T + A +++G++ +
Sbjct: 462 -----------------------KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 148 VKTIYEYDLILE----NSLVSMYAKCGEIDDSYRIFSNMAY-RDKISWNSMIMGLSDHGR 202
EY ++ + ++ ++++ G ++++ R + M + D I W +++ + G
Sbjct: 499 TS---EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
Query: 203 ASEALTVYETMLEFGL-YPDTVTFLGVLTA 231
E+++E +P T L + A
Sbjct: 556 LEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 190/327 (58%), Gaps = 1/327 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y +G + A LF S+ RD I W +MISGYVQ L E + ++ +M + P TF
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A +F A ++ L+ G++ H + +K + ++I++++LV MY KC D +R+F ++
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
R+ I+W S+I G HG+ SE L +E M E G P+ VTFL VLTAC H GLVDKGWE
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
F SM YG++P HY ++++ LGRAG++++A EFV++ P + + +WG+L+G C +
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIH- 391
Query: 305 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
+ + A + LELDP N +V N YA+ + +R++M GV+K PG S
Sbjct: 392 GNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQ 451
Query: 365 ILVKGRVHVFSSGDRLEPHVEDILLQI 391
I ++G VH F D E I ++
Sbjct: 452 IELQGEVHRFMKDDTSHRLSEKIYKKV 478
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 3/173 (1%)
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
F R + + G + EA+ L + + G T+AVL
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
+G+++H + + L+ L+ +YA G++ + +F ++ RD I WN+MI G
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
G E L +Y M + + PD TF V AC+ ++ G M+
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIK 237
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 2/150 (1%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N I + ++ Y +FD + R+ I WTS+ISGY + ++E + F +M
Sbjct: 243 NIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMK 302
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
G P TF V+ A +D+G + M+ E + ++V + G +
Sbjct: 303 EEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL 362
Query: 173 DDSYRIFSNMAYRDKIS-WNSMIMGLSDHG 201
++Y ++ W S++ HG
Sbjct: 363 QEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 212/368 (57%), Gaps = 4/368 (1%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D ++I Y + G L A+ +FD + R+ W MI+GY G + A +LFDSMP
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGR 141
++ +WT++ISG+ QN +EA+ +F M P + T + A ++ L+ GR
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSDH 200
+L G + + ++ + N+ + MY+KCG ID + R+F + R+ SWNSMI L+ H
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G+ EALT++ ML G PD VTF+G+L AC H G+V KG ELF SM + + P +H
Sbjct: 296 GKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 355
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
Y +I+LLGR GK+++A + + +P++P+ +WG L+G C + ++A A++ L +L
Sbjct: 356 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFH-GNVEIAEIASEALFKL 414
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKG-RVHVFSSGDR 379
+P N V + NIYAAN++ + +RK M+ + + KA G S+ + G VH F+ D+
Sbjct: 415 EPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK 474
Query: 380 LEPHVEDI 387
P +I
Sbjct: 475 SHPRSYEI 482
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 107/261 (40%), Gaps = 41/261 (15%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A LFD + + + +I Y + E+I L+ + G P + TF +F A S
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
+ R LH ++ +E D +L++ YAK G + + R+F M+ RD WN+M
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 194 IM-------------------------------GLSDHGRASEALTVYETM-LEFGLYPD 221
I G S +G SEAL ++ M + + P+
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 222 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN----LLGRAGKVKDA 277
+T + VL ACA+ G ++ G L Y + GF I + N + + G + A
Sbjct: 215 HITVVSVLPACANLGELEIGRRL-----EGYARENGFFDNIYVCNATIEMYSKCGMIDVA 269
Query: 278 EEFVLRLPVEPNHAIWGALVG 298
+ L + N W +++G
Sbjct: 270 KRLFEELGNQRNLCSWNSMIG 290
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 210/389 (53%), Gaps = 4/389 (1%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCM 61
Y G +D AS + + D N+M++G+V++G + A+ LFD + + I WT M
Sbjct: 154 YIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTM 213
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPL 120
I GY + + A LFD+MP+R+ ++W +MI GY QN+ E I LF EM A P
Sbjct: 214 IHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPD 273
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ T + A+ L G H + + + + +++ MY+KCGEI+ + RIF
Sbjct: 274 DVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFD 333
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M + SWN+MI G + +G A AL ++ TM+ PD +T L V+TAC H GLV++
Sbjct: 334 EMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEE 392
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G + F+ M GL +HY +++LLGRAG +K+AE+ + +P EPN I + + C
Sbjct: 393 GRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSAC 451
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
G K D + A R K+ +EL+P N +V L N+YAA+ R + ++ MR +K
Sbjct: 452 GQYK-DIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEV 510
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDILL 389
GCS I + V F SGD PH I L
Sbjct: 511 GCSLIEINYIVSEFISGDTTHPHRRSIHL 539
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 10/240 (4%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G++ A + FD MP R ++WT++ISGY++ + A LF + M H
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQ-MPH-VK 174
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ A++ G + S R M KT+ I +++ Y +ID + ++
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTV-----ITWTTMIHGYCNIKDIDAARKL 229
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGL 237
F M R+ +SWN+MI G + + E + +++ M L PD VT L VL A + G
Sbjct: 230 FDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGA 289
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ G E + V L +I+++ + G+++ A+ +P E A W A++
Sbjct: 290 LSLG-EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAMI 347
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 11/224 (4%)
Query: 77 LFDSMPDRD-SIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSV 134
LFD P RD S SMI Y++ ++ +L+ ++ F+P N TF L +
Sbjct: 32 LFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLS 91
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
+ QG QLH + + D+ + +V MYAK G++ + F M +R ++SW ++I
Sbjct: 92 MCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALI 151
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G G A +++ M D V + ++ +G + LF+ M + +
Sbjct: 152 SGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI 208
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ ++I+ + A + +P E N W ++G
Sbjct: 209 T-----WTTMIHGYCNIKDIDAARKLFDAMP-ERNLVSWNTMIG 246
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 127/393 (32%), Positives = 220/393 (55%), Gaps = 33/393 (8%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWT----------------------------- 59
++I+ Y G++ +A+++FD +P R+ IAWT
Sbjct: 909 TLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEAT 968
Query: 60 --CMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF 117
C+I+GY+ G + +A LF+ MP +D I+WT+MI GY QN+ EAI++F +MM G
Sbjct: 969 SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 1028
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P T + + A + L+ G+++H ++ + D+ + ++LV MY+KCG ++ +
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F N+ ++ WNS+I GL+ HG A EAL ++ M + P+ VTF+ V TAC HAGL
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
VD+G ++ SM++ Y + +HY +++L +AG + +A E + + EPN IWGAL+
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
C + K + +A A +L+ L+P+N+ + L ++YA +R ++ +R MR G+
Sbjct: 1209 DGCRIHK-NLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIE 1267
Query: 358 K-APGCSWILVKGRVHVFSSGDRLEPHVEDILL 389
K PG S I + R H+F++ D+ +++ L
Sbjct: 1268 KICPGTSSIRIDKRDHLFAAADKSHSASDEVCL 1300
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 188/327 (57%), Gaps = 1/327 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y+ G + A FDS+P D +AWT+MISG ++N A +F +M G P T
Sbjct: 562 YVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTI 621
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A L A + L+QGRQ+H +K D + SLV MYAKCG IDD+Y +F +
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+ +WN+M++GL+ HG E L +++ M G+ PD VTF+GVL+AC+H+GLV + ++
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKH 741
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
SM YG++P +HY + + LGRAG VK AE + + +E + +++ L+ C + +
Sbjct: 742 MRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRV-Q 800
Query: 305 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
D + R +LLEL+PL++ +V L N+YAA + E+ R M+ V+K PG SW
Sbjct: 801 GDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSW 860
Query: 365 ILVKGRVHVFSSGDRLEPHVEDILLQI 391
I VK ++H+F DR E I ++
Sbjct: 861 IEVKNKIHIFVVDDRSNRQTELIYRKV 887
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 120/244 (49%), Gaps = 8/244 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y S + K ++ + D +AW +M++GY Q+ + + LF M G
Sbjct: 456 TALIDAY-SRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ T A +F G + ++QG+Q+H +K+ Y+ DL + + ++ MY KCG++ +
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F ++ D ++W +MI G ++G A V+ M G+ PD T + A + +
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634
Query: 239 DKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA- 295
++G ++ N+ L D ++ S++++ + G + DA R+ + N W A
Sbjct: 635 EQGRQIH---ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAM 690
Query: 296 LVGV 299
LVG+
Sbjct: 691 LVGL 694
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 44/291 (15%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM------P 82
+++N Y++ G++++ + LF+ +P R+ + W M+ YL G +A DL + P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 83 DRDSIAWTSMISG--------------------------------YVQNELIAEAISLFG 110
+ ++ + ISG Y+ + + + F
Sbjct: 245 NEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFA 304
Query: 111 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 170
+M+ TF ++ V L G+Q+H M +K + L + NSL++MY K
Sbjct: 305 DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 364
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
+ + +F NM+ RD ISWNS+I G++ +G EA+ ++ +L GL PD T VL
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 231 ACAHAGLVDKGWELFNSM-VNSYGLQPGFDHYIS--IINLLGRAGKVKDAE 278
A A + +G L + V++ + D ++S +I+ R +K+AE
Sbjct: 425 A---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 28 NSMINGYVQAGQLEKAQEL-FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
N++ + + G+ A+ L F+ P R I +IS Y G + A +FD MPDRD
Sbjct: 48 NAITSSDLMLGKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 87 IAWTSMISGYVQN-----ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
++W S+++ Y Q+ E I +A LF + T + + Y+
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
HG K + D + +LV++Y K G++ + +F M YRD + WN M+ + G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 202 RASEALTVYETMLEFGLYPDTVTF 225
EA+ + GL P+ +T
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITL 249
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 157 ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA-----SEALTVYE 211
L N+L+SMY+KCG + + R+F M RD +SWNS++ + +A ++
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 212 TMLEFGLYPDTVTFLGVLTACAHAGLVDKGW--ELFNSMVNSYGLQPGFDHYI--SIINL 267
+ + +Y +T +L C H+G V W E F+ GL D ++ +++N+
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYV---WASESFHGYACKIGLDG--DEFVAGALVNI 189
Query: 268 LGRAGKVKDAEEFVLRLP 285
+ GKVK+ + +P
Sbjct: 190 YLKFGKVKEGKVLFEEMP 207
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 241 bits (614), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 208/356 (58%), Gaps = 2/356 (0%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
S+I+ Y + GQ+E A+ FD + +++ WT +ISGY G + A LF MP+++ ++
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVS 278
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
WT++I+GYV+ A+ LF +M+A G P TF+ A S+A L G+++HG +
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDHGRASEAL 207
+T + I+ +SL+ MY+K G ++ S R+F + D + WN+MI L+ HG +AL
Sbjct: 339 RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+ + M++F + P+ T + +L AC+H+GLV++G F SM +G+ P +HY +I+L
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL 458
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LGRAG K+ + +P EP+ IW A++GVC + + ++ +A L++LDP ++
Sbjct: 459 LGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNE-ELGKKAADELIKLDPESSAP 517
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 383
++ L +IYA + + + LR M+ + V K SWI ++ +V F+ D H
Sbjct: 518 YILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAH 573
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 144/302 (47%), Gaps = 34/302 (11%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N +I Y++ G+ A ++FD + +RN +W M+SGY+ +G + +A +FDSMP+RD +
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +M+ GY Q+ + EA+ + E G +FA L A L RQ HG
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD--------------------- 186
+ + +++L S++ YAKCG+++ + R F M +D
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 187 ----------KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+SW ++I G G + AL ++ M+ G+ P+ TF L A A
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI-WGA 295
+ G E+ M+ + ++P S+I++ ++G + +A E V R+ + + + W
Sbjct: 326 SLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSL-EASERVFRICDDKHDCVFWNT 383
Query: 296 LV 297
++
Sbjct: 384 MI 385
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 114/277 (41%), Gaps = 45/277 (16%)
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG-MQVK 149
S +S + +++A+S + G A L G L QG+ +H +++
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYR-------------------------------I 178
+ +L N L+ MY KCG+ D+ + +
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F +M RD +SWN+M++G + G EAL Y+ G+ + +F G+LTAC + +
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 239 DKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
N + L GF + SII+ + G+++ A+ + V+ H IW
Sbjct: 196 Q-----LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH-IWT 249
Query: 295 ALVGVCGLSKT-DADVASRATKRLLELDPLNAPGHVA 330
L+ G +K D + A + + E +P++ +A
Sbjct: 250 TLIS--GYAKLGDMEAAEKLFCEMPEKNPVSWTALIA 284
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 216/397 (54%), Gaps = 8/397 (2%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQEL---FDTVPIRNKIA 57
MY G + A L+ ++ D S NS++ GY Q + + A E+ ++V I +
Sbjct: 184 MYGKCGFLSEARLVLD-EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAG 242
Query: 58 WTCMISGYLS---AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA 114
+ +S V D+F M + ++W MI Y++N + EA+ L+ M A
Sbjct: 243 TMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEA 302
Query: 115 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
GF P + + A G + L G+++HG + +L+LEN+L+ MYAKCG ++
Sbjct: 303 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEK 362
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
+ +F NM RD +SW +MI GR +A+ ++ + + GL PD++ F+ L AC+H
Sbjct: 363 ARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSH 422
Query: 235 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
AGL+++G F M + Y + P +H +++LLGRAGKVK+A F+ + +EPN +WG
Sbjct: 423 AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWG 482
Query: 295 ALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIK 354
AL+G C + +D D+ A +L +L P + +V L NIYA R E+T++R M+ K
Sbjct: 483 ALLGACRV-HSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSK 541
Query: 355 GVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
G++K PG S + V +H F GDR P ++I ++
Sbjct: 542 GLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYREL 578
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y S V A +FD +P+R+ I MI YV N E + +FG M P
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ TF + A + GR++HG K L + N LVSMY KCG + ++ +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
M+ RD +SWNS+++G + + R +AL V M + D T +L A ++
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 191/317 (60%), Gaps = 7/317 (2%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y +G+V A +F+ MP+R+ ++WT+MISG+ Q + + L+ +M P + TF
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L A L QGR +H + + L + NSL+SMY KCG++ D++RIF +
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
+D +SWNSMI G + HG A +A+ ++E M+ + G PD +T+LGVL++C HAGLV +G +
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRK 344
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 303
FN M +GL+P +HY +++LLGR G +++A E + +P++PN IWG+L+ C
Sbjct: 345 FFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSC--- 400
Query: 304 KTDADVAS--RATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 361
+ DV + RA + L L+P A HV L N+YA+ E ++RK M+ KG++ PG
Sbjct: 401 RVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPG 460
Query: 362 CSWILVKGRVHVFSSGD 378
CSWI + V +F + D
Sbjct: 461 CSWIEINNYVFMFKAED 477
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G H + +K + D+ L +SLV +Y GE++++Y++F M R+ +SW +MI G +
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
R L +Y M + P+ TF +L+AC +G + +G V+ L G
Sbjct: 199 EWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG-----RSVHCQTLHMGLK 253
Query: 260 HYI----SIINLLGRAGKVKDA 277
Y+ S+I++ + G +KDA
Sbjct: 254 SYLHISNSLISMYCKCGDLKDA 275
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSP 119
+IS Y G + A +FD ++D ++W SMI+GY Q+ L +AI LF MM G P
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T+ + + + +GR+ + + + +L + LV + + G + ++ +
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELI 381
Query: 180 SNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 221
NM + + + W S++ HG + E L L PD
Sbjct: 382 ENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM--LEPD 422
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR--- 84
NS+I+ Y + G L+ A +FD ++ ++W MI+GY G +A +LF+ M +
Sbjct: 260 NSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT 319
Query: 85 --DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
D+I + ++S L+ E F M HG P ++ L +G L + +
Sbjct: 320 KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALE 379
Query: 143 L 143
L
Sbjct: 380 L 380
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 238 bits (607), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 184/327 (56%), Gaps = 2/327 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y GQV A LFD M + I W +MISGY +N EAI +F EM+ P +
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A V L+Q R ++ ++ Y D+ + ++L+ M+AKCG ++ + +F
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
RD + W++MI+G HGRA EA+++Y M G++P+ VTFLG+L AC H+G+V +GW
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
FN M + + + P HY +I+LLGRAG + A E + +PV+P +WGAL+ C +
Sbjct: 447 FNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505
Query: 305 TDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
++ A ++L +DP N +V L N+YAA + +R M+ KG+ K GCSW
Sbjct: 506 -HVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 564
Query: 365 ILVKGRVHVFSSGDRLEPHVEDILLQI 391
+ V+GR+ F GD+ P E+I Q+
Sbjct: 565 VEVRGRLEAFRVGDKSHPRYEEIERQV 591
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 119/238 (50%), Gaps = 10/238 (4%)
Query: 67 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 126
SA VF+ L P+R ++WT+++S Y QN EA+ +F +M P
Sbjct: 172 SARTVFEGLPL----PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVS 227
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 186
+ A + L QGR +H VK E + L SL +MYAKCG++ + +F M +
Sbjct: 228 VLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPN 287
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 246
I WN+MI G + +G A EA+ ++ M+ + PDT++ ++ACA G +++ ++
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 247 SMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
+ S D +IS +I++ + G V+ A V ++ + +W A++ GL
Sbjct: 348 YVGRSDYRD---DVFISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGL 401
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 5/290 (1%)
Query: 11 ASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR-NKIAWTCMISGYLSAG 69
AS L N D S+I+ QL++ + ++ + T +I S G
Sbjct: 8 ASPLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 70 QVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 129
+ A +FD +P W ++I GY +N +A+ ++ M SP + TF L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 130 AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK-- 187
A +++L GR +H + ++ D+ ++N L+++YAKC + + +F + ++
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
+SW +++ + +G EAL ++ M + + PD V + VL A + +G + S
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 248 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+V GL+ D IS+ + + G+V A+ ++ PN +W A++
Sbjct: 248 VVK-MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 196/327 (59%), Gaps = 1/327 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y G++ ++ F+ D+IAW +++SG+ Q+ EA+ +F M G
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNN 691
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
N TF A A + QG+Q+H + KT Y+ + + N+L+SMYAKCG I D+ + F
Sbjct: 692 NFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFL 751
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
++ ++++SWN++I S HG SEAL ++ M+ + P+ VT +GVL+AC+H GLVDK
Sbjct: 752 EVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDK 811
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G F SM + YGL P +HY+ ++++L RAG + A+EF+ +P++P+ +W L+ C
Sbjct: 812 GIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC 871
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ K + ++ A LLEL+P ++ +V L N+YA + + R++M+ KGV+K P
Sbjct: 872 VVHK-NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEP 930
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDI 387
G SWI VK +H F GD+ P ++I
Sbjct: 931 GQSWIEVKNSIHSFYVGDQNHPLADEI 957
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 133/246 (54%), Gaps = 10/246 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G V A +FD + +D +W +MISG +NE AEAI LF +M G P
Sbjct: 228 LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 287
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
F+ + A + L+ G QLHG+ +K + D + N+LVS+Y G + + IFS
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
NM+ RD +++N++I GLS G +A+ +++ M GL PD+ T ++ AC+ G + +
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 241 GWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
G +L ++Y + GF ++ I +++NL + ++ A ++ L VE N +W +
Sbjct: 408 GQQL-----HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVM 461
Query: 297 VGVCGL 302
+ GL
Sbjct: 462 LVAYGL 467
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 148/314 (47%), Gaps = 11/314 (3%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKI--AWTC--MISGYLSAGQVFKACDLFDSMPDR 84
S++ ++ G LE +++ + N A+ C +I Y G++ A D+ +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D ++WT+MI+GY Q +A++ F +M+ G A + L +G+Q+H
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+ + DL +N+LV++Y++CG+I++SY F D I+WN+++ G G
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
EAL V+ M G+ + TF + A + + +G ++ ++++ G + ++
Sbjct: 675 EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNAL 733
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
I++ + G + DAE+ L + + N W A++ + + S A ++ N
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIIN----AYSKHGFGSEALDSFDQMIHSN 788
Query: 325 A-PGHVALCNIYAA 337
P HV L + +A
Sbjct: 789 VRPNHVTLVGVLSA 802
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 3/182 (1%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
YL G ++ A +FD MP+R W MI LI E LF M++ +P GTF
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 125 AVLFGAM--GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 182
+ + A GSVA+ D Q+H + ++ N L+ +Y++ G +D + R+F +
Sbjct: 190 SGVLEACRGGSVAF-DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 183 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 242
+D SW +MI GLS + +EA+ ++ M G+ P F VL+AC ++ G
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 243 EL 244
+L
Sbjct: 309 QL 310
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 41/319 (12%)
Query: 18 NLNNFDDQSLNSMINGYVQAGQLEKAQELFDTV------PIRNKIA---WTCMISGYLSA 68
N++ D + N++ING Q G EKA ELF + P N +A C G L
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 69 GQ------------------------------VFKACDLFDSMPDRDSIAWTSMISGYVQ 98
GQ + A D F + + W M+ Y
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 99 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 158
+ + + +F +M P T+ + + L+ G Q+H +KT ++ + +
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 159 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
+ L+ MYAK G++D ++ I A +D +SW +MI G + + +ALT + ML+ G+
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
D V ++ACA + +G ++ S G +++ L R GK++++
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 279 EFVLRLPVEPNHAIWGALV 297
+ N A W ALV
Sbjct: 647 LAFEQTEAGDNIA-WNALV 664
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 111/228 (48%), Gaps = 9/228 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S Y G + A +F +M RD++ + ++I+G Q +A+ LF M G P
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ T A L A + L +G+QLH K + + +E +L+++YAKC +I+ + F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 181 NMAYRDKISWNSMIM--GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
+ + WN M++ GL D R S ++ M + P+ T+ +L C G +
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNS--FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 239 DKGWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAEEFVLRL 284
+ G ++ + ++ + + Y+ +I++ + GK+ A + ++R
Sbjct: 507 ELGEQIHSQIIKT---NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 8/196 (4%)
Query: 116 GFSPLNGTFA-VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
G P + T +L G + + LD+GR+LH +K + + L L Y G++
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
++++F M R +WN MI L+ E ++ M+ + P+ TF GVL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 235 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV--LRLPVEPNHAI 292
+ E ++ + GL+ +I+L R G V A LRL +H+
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL---KDHSS 255
Query: 293 WGALVGVCGLSKTDAD 308
W A++ GLSK + +
Sbjct: 256 WVAMIS--GLSKNECE 269
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 238 bits (606), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 226/399 (56%), Gaps = 10/399 (2%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
MY G +++A + ++ + + N++I + + A+E+FD + +RN +W
Sbjct: 150 MYGGCGCVEFARKVFD-EMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNV 208
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
M++GY+ AG++ A +F MP RD ++W++MI G N E+ F E+ G SP
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 268
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ + A + G+ LHG K Y + + + N+L+ MY++CG + + +F
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 328
Query: 181 NMA-YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
M R +SW SMI GL+ HG+ EA+ ++ M +G+ PD ++F+ +L AC+HAGL++
Sbjct: 329 GMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIE 388
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+G + F+ M Y ++P +HY +++L GR+GK++ A +F+ ++P+ P +W L+G
Sbjct: 389 EGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGA 448
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C S + ++A + +RL ELDP N+ V L N YA + ++ S+RK M ++ ++K
Sbjct: 449 CS-SHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKT 507
Query: 360 PGCSWILVKGRVHVFSSGDR-----LEPH--VEDILLQI 391
S + V ++ F++G++ +E H +++I+L++
Sbjct: 508 TAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRL 546
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVA 135
L P+ D+ + +++ GY +++ ++++F EMM GF P + +FA + A+ +
Sbjct: 61 LLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFR 120
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
L G Q+H +K E L + +L+ MY CG ++ + ++F M + ++WN++I
Sbjct: 121 SLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVIT 180
Query: 196 GLSDHGRASEALTVYETML 214
+ A +++ ML
Sbjct: 181 ACFRGNDVAGAREIFDKML 199
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 237 bits (605), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 129/374 (34%), Positives = 203/374 (54%), Gaps = 15/374 (4%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELF---------DTVPIRNKIAWTCMISGYLSAGQVFK 73
++Q+ SM + +L ++L D++ + N M+ Y + G +
Sbjct: 309 NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS-----MMKMYSTCGNLVS 363
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A LF M RD I+W+++I GY Q E F M G P + A L G+
Sbjct: 364 ASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGN 423
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
+A ++ GRQ+H + + E + + +SL++MY+KCG I ++ IF D +S +M
Sbjct: 424 MAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAM 483
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I G ++HG++ EA+ ++E L+ G PD+VTF+ VLTAC H+G +D G+ FN M +Y
Sbjct: 484 INGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYN 543
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRA 313
++P +HY +++LL RAG++ DAE+ + + + + +W L+ C +K D + RA
Sbjct: 544 MRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACK-AKGDIERGRRA 602
Query: 314 TKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHV 373
+R+LELDP A V L NIY++ E ++RK M+ KGV K PG S I +K V
Sbjct: 603 AERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSA 662
Query: 374 FSSGDRLEPHVEDI 387
F SGDR P EDI
Sbjct: 663 FVSGDRFHPQSEDI 676
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 124/271 (45%), Gaps = 35/271 (12%)
Query: 66 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA--HGFSPLNGT 123
++AG + A +FD MP D ++WTS+I YV EA+ LF M H SP
Sbjct: 51 INAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSV 110
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
+V+ A G + + G LH VKT + + +SL+ MY + G+ID S R+FS M
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA---------- 233
+R+ ++W ++I GL GR E LT + M DT TF L ACA
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 234 -HAGLVDKGWE----LFNSMVNSYG----LQPG---FDH--------YISIINLLGRAGK 273
H ++ +G+ + NS+ Y +Q G F++ + S+I R G+
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 274 -VKDAEEFV--LRLPVEPNHAIWGALVGVCG 301
VK E F+ V PN + ++ C
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 1/213 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G++ K+C +F MP R+++ WT++I+G V E ++ F EM TF
Sbjct: 153 YKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTF 212
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A+ A + + G+ +H + + L + NSL +MY +CGE+ D +F NM+
Sbjct: 213 AIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSE 272
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
RD +SW S+I+ G+ +A+ + M + P+ TF + +ACA + G +L
Sbjct: 273 RDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQL 332
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
+++ S GL S++ + G + A
Sbjct: 333 HCNVL-SLGLNDSLSVSNSMMKMYSTCGNLVSA 364
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 39 QLEKAQELFDTVPIRNKIAWTCMISG----YLSAGQVFKACDLFDSMPDRDSIAWTSMIS 94
Q++ + + V +R + C+ + Y G++ LF++M +RD ++WTS+I
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 95 GYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY 154
Y + +A+ F +M P TFA +F A S++ L G QLH +
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343
Query: 155 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 214
L + NS++ MY+ CG + + +F M RD ISW+++I G G E + M
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 215 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV 274
+ G P +L+ + +++ G ++ +++ +GL+ S+IN+ + G +
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 275 KDA 277
K+A
Sbjct: 463 KEA 465
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 206/363 (56%), Gaps = 5/363 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I+ Y A++LFD +P +N + W ++ Y +G V A +FD M +RD +
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGM 146
W+SMI GYV+ +A+ +F +MM G S N T + A + L++G+ +H
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR--DKISWNSMIMGLSDHGRAS 204
+ +IL+ SL+ MYAKCG I D++ +F + + D + WN++I GL+ HG
Sbjct: 267 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 326
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
E+L ++ M E + PD +TFL +L AC+H GLV + W F S+ S G +P +HY +
Sbjct: 327 ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACM 385
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
+++L RAG VKDA +F+ +P++P ++ GAL+ C ++ + ++A K+L+EL P N
Sbjct: 386 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGC-INHGNLELAETVGKKLIELQPHN 444
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 384
+V L N+YA N + S+R+ M KGV+K G S + + G H F + D+ H
Sbjct: 445 DGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHS 504
Query: 385 EDI 387
+ I
Sbjct: 505 DKI 507
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 122/276 (44%), Gaps = 34/276 (12%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 115
++ T S S+G V A + D + W +I G+ + ++IS++ +M+
Sbjct: 43 VSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRF 102
Query: 116 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
G P + T+ L + ++ G LH VK+ E+DL + N+L+ MY + +
Sbjct: 103 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 176 YRIFSNMAYRDKISWN-------------------------------SMIMGLSDHGRAS 204
++F M +++ ++WN SMI G G +
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 222
Query: 205 EALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+AL +++ M+ G + VT + V+ ACAH G +++G + +++ + L S
Sbjct: 223 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH-LPLTVILQTS 281
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAI-WGALVG 298
+I++ + G + DA R V+ A+ W A++G
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 211/360 (58%), Gaps = 10/360 (2%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
++++N YV+ L A+ FD N ++ T +ISGYL + +A LF +MP+R +
Sbjct: 132 SAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVV 191
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
W ++I G+ Q EA++ F +M+ G P TF A+ ++A G+ +H
Sbjct: 192 TWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHAC 251
Query: 147 QVKTI-YEYDLILENSLVSMYAKCGEIDDSYRIFSNM--AYRDKISWNSMIMGLSDHGRA 203
+K + +++ + NSL+S Y+KCG ++DS F+ + R+ +SWNSMI G + +GR
Sbjct: 252 AIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRG 311
Query: 204 SEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG---FD 259
EA+ ++E M+ + L P+ VT LGVL AC HAGL+ +G+ FN VN Y P +
Sbjct: 312 EEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELE 370
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLE 319
HY ++++L R+G+ K+AEE + +P++P W AL+G C + ++ +A A ++LE
Sbjct: 371 HYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQI-HSNKRLAKLAASKILE 429
Query: 320 LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
LDP + +V L N Y+A + ++ +R++M+ G+++ GCSWI V+ ++ VF + D+
Sbjct: 430 LDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADK 489
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 38/268 (14%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
++ + + A +FD +P+ D I+ T++I +V+ EA F ++ G P TF
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 125 AVLFGAMGSVAYLDQGRQLH--------------GMQVKTIY-----------------E 153
+ G+ + + G+QLH G V Y +
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 154 YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM 213
+++ +L+S Y K E +++ +F M R ++WN++I G S GR EA+ + M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 214 LEFGLY-PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 272
L G+ P+ TF +TA ++ G + + G + + S+I+ + G
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 273 KVKDAEEFVLRLPVEP------NHAIWG 294
++D+ +L E N IWG
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWG 304
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 212/379 (55%), Gaps = 15/379 (3%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELF-------DTVPIRNK-------IAWTCMISGYLSA 68
D+ +++++ YV G ++ A+ LF D V + ++ + W MI GY+
Sbjct: 162 DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL 221
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
G A LFD M R ++W +MISGY N +A+ +F EM P T +
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
A+ + L+ G LH + D +L ++L+ MY+KCG I+ + +F + + I
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVI 341
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
+W++MI G + HG+A +A+ + M + G+ P V ++ +LTAC+H GLV++G F+ M
Sbjct: 342 TWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQM 401
Query: 249 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 308
V+ GL+P +HY +++LLGR+G + +AEEF+L +P++P+ IW AL+G C + + + +
Sbjct: 402 VSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRM-QGNVE 460
Query: 309 VASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK 368
+ R L+++ P ++ +VAL N+YA+ E++ +R M+ K +RK PGCS I +
Sbjct: 461 MGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDID 520
Query: 369 GRVHVFSSGDRLEPHVEDI 387
G +H F D P ++I
Sbjct: 521 GVLHEFVVEDDSHPKAKEI 539
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 54/274 (19%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNE----LIAEAISLFGEMMAHGF-SPLNGTFAVLF 128
A +F+ MP R+ +W ++I G+ +++ LIA I+LF EMM+ F P TF +
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIA--ITLFYEMMSDEFVEPNRFTFPSVL 135
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS----YR------- 177
A + +G+Q+HG+ +K + D + ++LV MY CG + D+ Y+
Sbjct: 136 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 195
Query: 178 ----------------------------------IFSNMAYRDKISWNSMIMGLSDHGRA 203
+F M R +SWN+MI G S +G
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+A+ V+ M + + P+ VT + VL A + G ++ G E + G++ +
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSA 314
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+I++ + G ++ A RLP E N W A++
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMI 347
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG----EIDDSYRIFSNM 182
LF + + + Q+H + +K+ D + ++ A ++D +++IF+ M
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 183 AYRDKISWNSMIMGL--SDHGRASEALTV-YETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
R+ SWN++I G SD +A A+T+ YE M + + P+ TF VL ACA G +
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 240 KGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
+G ++ + + YG G D ++ +++ + G +KDA + +E + +
Sbjct: 146 EGKQI-HGLALKYGF--GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 220/371 (59%), Gaps = 4/371 (1%)
Query: 20 NNFD--DQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDL 77
N F+ D N++I+ Y++ + + A +FD + + + W +++GY+ G+V A +
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAY 136
F++MP+++ ++W ++ISG VQ L EAI +F M + G + T + A G +
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
LD + ++ K + D+ L +LV M+++CG+ + + IF+++ RD +W + I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
++ G A A+ +++ M+E GL PD V F+G LTAC+H GLV +G E+F SM+ +G+ P
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
HY +++LLGRAG +++A + + +P+EPN IW +L+ C + + + ++A+ A ++
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV-QGNVEMAAYAAEK 664
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 376
+ L P +V L N+YA+ R ++ +R M+ KG+RK PG S I ++G+ H F+S
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 377 GDRLEPHVEDI 387
GD P + +I
Sbjct: 725 GDESHPEMPNI 735
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 9/208 (4%)
Query: 48 DTVPIRNKIAWTCMISGYLS---AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE 104
D I +A +C + S A +VF+ + + + + S+I GY + L E
Sbjct: 63 DVSTITKLVARSCELGTRESLSFAKEVFENSESYGT-----CFMYNSLIRGYASSGLCNE 117
Query: 105 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 164
AI LF MM G SP TF A G Q+HG+ VK Y DL ++NSLV
Sbjct: 118 AILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTV 223
YA+CGE+D + ++F M+ R+ +SW SMI G + A +A+ ++ M+ + + P++V
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNS 251
T + V++ACA ++ G +++ + NS
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNS 265
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 6/209 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSP 119
++ Y G++ A +FD M +R+ ++WTSMI GY + + +A+ LF M+ +P
Sbjct: 175 LVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTP 234
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ T + A + L+ G +++ + E + ++ ++LV MY KC ID + R+F
Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ N+M G EAL V+ M++ G+ PD ++ L +++C+ +
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNI- 353
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLL 268
L+ + Y L+ GF+ + +I N L
Sbjct: 354 ----LWGKSCHGYVLRNGFESWDNICNAL 378
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 4/219 (1%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + + ++ Y+ + A LFD + +M S YV+ L EA+ +F MM
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P + + + + G+ HG ++ +E + N+L+ MY KC D
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
++RIF M+ + ++WNS++ G ++G A +ETM E + V++ +++
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE----KNIVSWNTIISGLV 445
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 272
L ++ E+F SM + G+ +SI + G G
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 118/262 (45%), Gaps = 14/262 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
+D ++++++ Y++ ++ A+ LFD N M S Y+ G +A +F+ M
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 83 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
D D I+ S IS Q I S G ++ +GF + L D
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 139 QG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
R M KT+ + NS+V+ Y + GE+D ++ F M ++ +SWN++I GL
Sbjct: 390 TAFRIFDRMSNKTVVTW-----NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 198 SDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVD-KGWELFNSMVNSYGLQ 255
EA+ V+ +M + G+ D VT + + +AC H G +D W + + G+Q
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY--YIEKNGIQ 502
Query: 256 PGFDHYISIINLLGRAGKVKDA 277
+++++ R G + A
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESA 524
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 220/371 (59%), Gaps = 4/371 (1%)
Query: 20 NNFD--DQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDL 77
N F+ D N++I+ Y++ + + A +FD + + + W +++GY+ G+V A +
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAY 136
F++MP+++ ++W ++ISG VQ L EAI +F M + G + T + A G +
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
LD + ++ K + D+ L +LV M+++CG+ + + IF+++ RD +W + I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
++ G A A+ +++ M+E GL PD V F+G LTAC+H GLV +G E+F SM+ +G+ P
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
HY +++LLGRAG +++A + + +P+EPN IW +L+ C + + + ++A+ A ++
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV-QGNVEMAAYAAEK 664
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 376
+ L P +V L N+YA+ R ++ +R M+ KG+RK PG S I ++G+ H F+S
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 377 GDRLEPHVEDI 387
GD P + +I
Sbjct: 725 GDESHPEMPNI 735
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 1/164 (0%)
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
+ S+I GY + L EAI LF MM G SP TF A G Q+HG+ V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
K Y DL ++NSLV YA+CGE+D + ++F M+ R+ +SW SMI G + A +A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 209 VYETML-EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
++ M+ + + P++VT + V++ACA ++ G +++ + NS
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 6/209 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSP 119
++ Y G++ A +FD M +R+ ++WTSMI GY + + +A+ LF M+ +P
Sbjct: 175 LVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTP 234
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ T + A + L+ G +++ + E + ++ ++LV MY KC ID + R+F
Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ N+M G EAL V+ M++ G+ PD ++ L +++C+ +
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNI- 353
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLL 268
L+ + Y L+ GF+ + +I N L
Sbjct: 354 ----LWGKSCHGYVLRNGFESWDNICNAL 378
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 4/219 (1%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + + ++ Y+ + A LFD + +M S YV+ L EA+ +F MM
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P + + + + G+ HG ++ +E + N+L+ MY KC D
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
++RIF M+ + ++WNS++ G ++G A +ETM E + V++ +++
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE----KNIVSWNTIISGLV 445
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 272
L ++ E+F SM + G+ +SI + G G
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 118/262 (45%), Gaps = 14/262 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
+D ++++++ Y++ ++ A+ LFD N M S Y+ G +A +F+ M
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 83 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
D D I+ S IS Q I S G ++ +GF + L D
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 139 QG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
R M KT+ + NS+V+ Y + GE+D ++ F M ++ +SWN++I GL
Sbjct: 390 TAFRIFDRMSNKTVVTW-----NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 198 SDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVD-KGWELFNSMVNSYGLQ 255
EA+ V+ +M + G+ D VT + + +AC H G +D W + + G+Q
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY--YIEKNGIQ 502
Query: 256 PGFDHYISIINLLGRAGKVKDA 277
+++++ R G + A
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESA 524
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 234 bits (597), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 193/325 (59%), Gaps = 3/325 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIA-WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 123
Y+++ + +AC LF + SI WT M+SG+ QN EA+ + EM G P T
Sbjct: 675 YMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 734
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
F + ++ L +GR +H + ++ D + N+L+ MYAKCG++ S ++F M
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Query: 184 YRDKI-SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 242
R + SWNS+I G + +G A +AL ++++M + + PD +TFLGVLTAC+HAG V G
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGR 854
Query: 243 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
++F M+ YG++ DH +++LLGR G +++A++F+ ++P+ +W +L+G C +
Sbjct: 855 KIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRI 914
Query: 303 SKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 362
D + ++L+EL+P N+ +V L NIYA+ + +LRK MR +GV+K PG
Sbjct: 915 HGDDIR-GEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGY 973
Query: 363 SWILVKGRVHVFSSGDRLEPHVEDI 387
SWI V+ R H+F++GD+ + I
Sbjct: 974 SWIDVEQRTHIFAAGDKSHSEIGKI 998
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 7/217 (3%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWT-----CMISGYLSAGQVFKAC 75
N DD + S+++ + LE + F ++ I+ K+A ++ Y G + A
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDAR 483
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+F+ M DRD++ W ++I YVQ+E +EA LF M G A A V
Sbjct: 484 QIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVH 543
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
L QG+Q+H + VK + DL +SL+ MY+KCG I D+ ++FS++ +S N++I
Sbjct: 544 GLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIA 603
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
G S + EA+ +++ ML G+ P +TF ++ AC
Sbjct: 604 GYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 116/231 (50%), Gaps = 9/231 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ ++S Y ++ A +F+++ +++ + W +MI GY N + + LF +M + G++
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ TF L + L+ G Q H + +K +L + N+LV MYAKCG ++D+ +I
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M RD ++WN++I SEA +++ M G+ D L AC H +
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 239 DKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLP 285
+G + V+ ++ G D + S+I++ + G +KDA + LP
Sbjct: 546 YQGKQ-----VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 139/273 (50%), Gaps = 6/273 (2%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
+ +GYV+AG E+A +F+ + + +A+ +I+ Y+ G++ A LF M D
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPD 291
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+AW MISG+ + AI F M T + A+G VA LD G +H
Sbjct: 292 VVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHA 351
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+K ++ + +SLVSMY+KC +++ + ++F + ++ + WN+MI G + +G + +
Sbjct: 352 EAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHK 411
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
+ ++ M G D TF +L+ CA + ++ G + F+S++ L +++
Sbjct: 412 VMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALV 470
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++ + G ++DA + R+ + ++ W ++G
Sbjct: 471 DMYAKCGALEDARQIFERM-CDRDNVTWNTIIG 502
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 14/246 (5%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ +I Y G + A +F S+P+ ++ ++I+GY QN L EA+ LF EM+ G +
Sbjct: 568 SSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVN 626
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIY----EYDLILENSLVSMYAKCGEIDD 174
P TFA + A L G Q HG K + EY L SL+ MY + +
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEY---LGISLLGMYMNSRGMTE 683
Query: 175 SYRIFSNMAYRDKIS-WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+ +FS ++ I W M+ G S +G EAL Y+ M G+ PD TF+ VL C+
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHA 291
+ +G +S++ + L D S +I++ + G +K + + + N
Sbjct: 744 VLSSLREG-RAIHSLI--FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVV 800
Query: 292 IWGALV 297
W +L+
Sbjct: 801 SWNSLI 806
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 23/232 (9%)
Query: 39 QLEKAQELFDTVPIRNKIAW----------------------TCMISGYLSAGQVFKACD 76
+L K++++FD +P R +A ++ Y QV A
Sbjct: 57 KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEK 116
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
FD + ++D AW SM+S Y + + F + + P TF+++
Sbjct: 117 QFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETN 175
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
++ GRQ+H +K E + +LV MYAKC I D+ R+F + + + W + G
Sbjct: 176 VEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSG 235
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
G EA+ V+E M + G PD + F+ V+ G + LF M
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 15/224 (6%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+ +H + + + L N++V +YAKC ++ + + F + +D +WNSM+ S
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSS 137
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
G+ + L + ++ E ++P+ TF VL+ CA V+ G ++ SM+ GL+
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLERNSY 196
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG---VCGLSKTDADVASRATKR 316
+++++ + ++ DA V V+PN W L GL + V R
Sbjct: 197 CGGALVDMYAKCDRISDARR-VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR-- 253
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
D + P H+A + + +I L L+ + G +P
Sbjct: 254 ----DEGHRPDHLAFVTVI---NTYIRLGKLKDARLLFGEMSSP 290
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 234 bits (596), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 207/363 (57%), Gaps = 3/363 (0%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD--R 84
+ +I Y G L A+++FD + +++ W +++GY G++ +A L + MP R
Sbjct: 154 VTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVR 213
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
+ ++WT +ISGY ++ +EAI +F M+ P T + A + L+ G ++
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC 273
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+ L N+++ MYAK G I + +F + R+ ++W ++I GL+ HG +
Sbjct: 274 SYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGA 333
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
EAL ++ M++ G+ P+ VTF+ +L+AC+H G VD G LFNSM + YG+ P +HY +
Sbjct: 334 EALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCM 393
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
I+LLGRAGK+++A+E + +P + N AIWG+L+ + D ++ RA L++L+P N
Sbjct: 394 IDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHH-DLELGERALSELIKLEPNN 452
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 384
+ ++ L N+Y+ R E +R M+ GV+K G S I V+ RV+ F SGD P V
Sbjct: 453 SGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQV 512
Query: 385 EDI 387
E I
Sbjct: 513 ERI 515
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 124/311 (39%), Gaps = 63/311 (20%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
N D+ ++ I AG L A +F P N MI +A L D
Sbjct: 44 NRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI----------RALSLLDE 93
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
P+ SIA I+++ ++ A P TF + V+ + G
Sbjct: 94 -PNAHSIA-----------------ITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 135
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD-------------- 186
RQ+HG V ++ + + L+ MY CG + D+ ++F M +D
Sbjct: 136 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 195
Query: 187 -------------------KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
++SW +I G + GRASEA+ V++ ML + PD VT L
Sbjct: 196 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 255
Query: 228 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 287
VL+ACA G ++ G E S V+ G+ ++I++ ++G + A + V E
Sbjct: 256 VLSACADLGSLELG-ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALD-VFECVNE 313
Query: 288 PNHAIWGALVG 298
N W ++
Sbjct: 314 RNVVTWTTIIA 324
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/361 (33%), Positives = 205/361 (56%), Gaps = 1/361 (0%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
+N++++ + + G + +A+ +FD + R ++WT MISGY G + + LFD M ++D
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
+ W +MI G VQ + +A++LF EM P T A + LD G +H
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
K ++ L SLV MYAKCG I ++ +F + R+ +++ ++I GL+ HG AS A
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
++ + M++ G+ PD +TF+G+L+AC H G++ G + F+ M + + L P HY +++
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAP 326
LLGRAG +++A+ + +P+E + A+WGAL+ C + + ++ +A K+LLELDP ++
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRM-HGNVELGEKAAKKLLELDPSDSG 593
Query: 327 GHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVED 386
+V L +Y + + R+ M +GV K PGCS I V G V F D+ P E
Sbjct: 594 IYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEK 653
Query: 387 I 387
I
Sbjct: 654 I 654
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 123/256 (48%), Gaps = 16/256 (6%)
Query: 40 LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS------------MPDRDSI 87
LEK + L I+ ++ +I ++ ++ C L +S + + +
Sbjct: 60 LEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIF 119
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFS---PLNGTFAVLFGAMGSVAYLDQGRQLH 144
+W I G+ ++E E+ L+ +M+ HG P + T+ VLF + G +
Sbjct: 120 SWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMIL 179
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
G +K E + N+ + M+A CG+++++ ++F RD +SWN +I G G A
Sbjct: 180 GHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAE 239
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
+A+ VY+ M G+ PD VT +G++++C+ G +++G E F V GL+ ++
Sbjct: 240 KAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE-FYEYVKENGLRMTIPLVNAL 298
Query: 265 INLLGRAGKVKDAEEF 280
+++ + G + +A
Sbjct: 299 MDMFSKCGDIHEARRI 314
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 123/284 (43%), Gaps = 45/284 (15%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
SL MI G+V +LE + + I + S G + A +FD P RD
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNAS-----------IHMFASCGDMENARKVFDESPVRD 221
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
++W +I+GY + +AI ++ M + G P + T L + + L++G++ +
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE 281
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG---- 201
+ + L N+L+ M++KCG+I ++ RIF N+ R +SW +MI G + G
Sbjct: 282 YVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDV 341
Query: 202 ---------------------------RASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
R +AL +++ M PD +T + L+AC+
Sbjct: 342 SRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQ 401
Query: 235 AGLVDKG-WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
G +D G W + + Y L S++++ + G + +A
Sbjct: 402 LGALDVGIW--IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEA 443
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 196/328 (59%), Gaps = 2/328 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y + G V A +FD MP++D +AW S+I+G+ +N EA++L+ EM + G P T
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L A + L G+++H +K +L N L+ +YA+CG ++++ +F M
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWE 243
++ +SW S+I+GL+ +G EA+ +++ M GL P +TF+G+L AC+H G+V +G+E
Sbjct: 153 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 303
F M Y ++P +H+ +++LL RAG+VK A E++ +P++PN IW L+G C +
Sbjct: 213 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Query: 304 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
D+D+A A ++L+L+P ++ +V L N+YA+ R ++ +RK+M GV+K PG S
Sbjct: 273 -GDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 331
Query: 364 WILVKGRVHVFSSGDRLEPHVEDILLQI 391
+ V RVH F GD+ P + I ++
Sbjct: 332 LVEVGNRVHEFLMGDKSHPQSDAIYAKL 359
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G +H + +++ + + ++NSL+ +YA CG++ +Y++F M +D ++WNS+I G ++
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
+G+ EAL +Y M G+ PD T + +L+ACA G + G + M+ GL
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLH 125
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+++L R G+V++A+ + V+ N W +L+
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
RN + ++ Y G+V +A LFD M D++S++WTS+I G N EAI LF M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 113 MA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKC 169
+ G P TF + A + +G + + +++ Y+ + +E+ +V + A+
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 170 GEIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHG 201
G++ +Y +M + + W +++ + HG
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 213/375 (56%), Gaps = 17/375 (4%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ Y + G + + + +F+ + ++ ++WT ++ + + + ++F MP+R+++
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 88 AWTSMISGYVQNELIAEAISLFGEMM---AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
AWT M++GY+ E + L EM+ HG + + T + A L GR +H
Sbjct: 210 AWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFV--TLCSMLSACAQSGNLVVGRWVH 267
Query: 145 GMQVK--------TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
+K Y+ D+++ +LV MYAKCG ID S +F M R+ ++WN++ G
Sbjct: 268 VYALKKEMMMGEEASYD-DVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSG 326
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
L+ HG+ + ++ M+ + PD +TF VL+AC+H+G+VD+GW F+S+ YGL+P
Sbjct: 327 LAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEP 384
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
DHY +++LLGRAG +++AE + +PV PN + G+L+G C + ++A R +
Sbjct: 385 KVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSV-HGKVEIAERIKRE 443
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 376
L+++ P N + + N+Y A R LR +R +G+RK PG S I V VH FSS
Sbjct: 444 LIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSS 503
Query: 377 GDRLEPHVEDILLQI 391
GDR P ++I L++
Sbjct: 504 GDRSHPRTKEIYLKL 518
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 122/307 (39%), Gaps = 68/307 (22%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++ Y +G++ AQ+LFD +P+ K D++
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEK-----------------------------DNV 77
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
WT+++S + + L+ ++ LF EM + + LFG + L +Q HG+
Sbjct: 78 DWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVA 137
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS--------------------------- 180
VK + + N+L+ MY KCG + + RIF
Sbjct: 138 VKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGR 197
Query: 181 ----NMAYRDKISWNSMIMGLSDHGRASEALTVY-ETMLEFGLYPDTVTFLGVLTACAHA 235
M R+ ++W M+ G G E L + E + G + VT +L+ACA +
Sbjct: 198 EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQS 257
Query: 236 G-LVDKGWELFNSMVNS--YGLQPGFDHYI---SIINLLGRAGKVKDAEEFVLRLPVEPN 289
G LV W ++ G + +D + +++++ + G + D+ V RL + N
Sbjct: 258 GNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI-DSSMNVFRLMRKRN 316
Query: 290 HAIWGAL 296
W AL
Sbjct: 317 VVTWNAL 323
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 196/328 (59%), Gaps = 2/328 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y + G V A +FD MP++D +AW S+I+G+ +N EA++L+ EM + G P T
Sbjct: 166 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L A + L G+++H +K +L N L+ +YA+CG ++++ +F M
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 285
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWE 243
++ +SW S+I+GL+ +G EA+ +++ M GL P +TF+G+L AC+H G+V +G+E
Sbjct: 286 KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 345
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 303
F M Y ++P +H+ +++LL RAG+VK A E++ +P++PN IW L+G C +
Sbjct: 346 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV- 404
Query: 304 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
D+D+A A ++L+L+P ++ +V L N+YA+ R ++ +RK+M GV+K PG S
Sbjct: 405 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 464
Query: 364 WILVKGRVHVFSSGDRLEPHVEDILLQI 391
+ V RVH F GD+ P + I ++
Sbjct: 465 LVEVGNRVHEFLMGDKSHPQSDAIYAKL 492
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 113/210 (53%), Gaps = 3/210 (1%)
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGF-SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W ++I GY + A SL+ EM G P T+ L A+ ++A + G +H +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+++ + + ++NSL+ +YA CG++ +Y++F M +D ++WNS+I G +++G+ EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+Y M G+ PD T + +L+ACA G + G + M+ GL +++L
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNLHSSNVLLDL 266
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
R G+V++A+ + V+ N W +L+
Sbjct: 267 YARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
RN + ++ Y G+V +A LFD M D++S++WTS+I G N EAI LF M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 113 MA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKC 169
+ G P TF + A + +G + + +++ Y+ + +E+ +V + A+
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARA 373
Query: 170 GEIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHG 201
G++ +Y +M + + W +++ + HG
Sbjct: 374 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 198/368 (53%), Gaps = 3/368 (0%)
Query: 8 MDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLS 67
+D AS L ++ D S NSMI+GYV+ G++E A+ LFD +P R+ + W MI GY
Sbjct: 237 VDIASK-LFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAK 295
Query: 68 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAV 126
G V A LFD MP RD +A+ SM++GYVQN+ EA+ +F +M P + T +
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 355
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 186
+ A+ + L + +H V+ + L +L+ MY+KCG I + +F + +
Sbjct: 356 VLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS 415
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 246
WN+MI GL+ HG A + + L PD +TF+GVL AC+H+GLV +G F
Sbjct: 416 IDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFE 475
Query: 247 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 306
M + ++P HY ++++L R+G ++ A+ + +PVEPN IW + C K +
Sbjct: 476 LMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHK-E 534
Query: 307 ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL 366
+ K L+ N +V L N+YA+ ++ +R M+ + + K PGCSWI
Sbjct: 535 FETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIE 594
Query: 367 VKGRVHVF 374
+ GRVH F
Sbjct: 595 LDGRVHEF 602
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 25/317 (7%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP--DRD 85
N +I Y++ G L ++++FD +P R+ +++ MI GY+ G + A +LFD MP ++
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 86 SIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR--Q 142
I+W SMISGY Q ++ + A LF +M N Y+ GR
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMID---------GYVKHGRIED 270
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
G+ + D++ +++ YAK G + + +F M +RD +++NSM+ G +
Sbjct: 271 AKGL-FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKY 329
Query: 203 ASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
EAL ++ M E L PD T + VL A A G + K ++ +V G
Sbjct: 330 HMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQ-FYLGGKLG 388
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAI--WGALVG---VCGLSKTDADVASRATKR 316
+++I++ + G ++ A +L N +I W A++G + GL ++ D+ + +
Sbjct: 389 VALIDMYSKCGSIQHA---MLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERL 445
Query: 317 LLELDPLNAPGHVALCN 333
L+ D + G + C+
Sbjct: 446 SLKPDDITFVGVLNACS 462
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D W ++I + + +A+ L M+ +G S + +++ A + ++ G Q+H
Sbjct: 85 DPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIH 144
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
G KT DL L+N L+ +Y KCG + S ++F M RD +S+NSMI G G
Sbjct: 145 GFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIV 204
Query: 205 EALTVYETM 213
A +++ M
Sbjct: 205 SARELFDLM 213
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 204/358 (56%), Gaps = 2/358 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ + + G L+KA+ +FD++ +N WT M+ GY+S G++ +A LF+ P +D +
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
WT+M++GYVQ EA+ LF M G P N L L+QG+ +HG
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ D ++ +LV MYAKCG I+ + +F + RD SW S+I GL+ +G + AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+Y M G+ D +TF+ VLTAC H G V +G ++F+SM + +QP +H +I+L
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT--DADVASRATKRLLELDPLNA 325
L RAG + +AEE + ++ E + + + ++ + +A R ++L +++ ++
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485
Query: 326 PGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 383
H L ++YA+ +R ++T++R++M+ G+RK PGCS I + G H F GD L H
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSH 543
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 130/274 (47%), Gaps = 12/274 (4%)
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
+ + M+ + + ++LFGE+ G P N T V+ ++G + + +G ++HG
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
VK E+D + NSL+ MYA G+I+ ++++F M RD +SWN +I +GR +A
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 207 LTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
+ V++ M E L D T + L+AC+ ++ G ++ +V + + + +++
Sbjct: 132 IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALV 189
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCGLSKTDADVASRATKRLLELDPL- 323
++ + G + D V + N W ++V G + D + L E P+
Sbjct: 190 DMFCKCGCL-DKARAVFDSMRDKNVKCWTSMVFGYVSTGRID------EARVLFERSPVK 242
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
+ A+ N Y +R E L + M+ G+R
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 136/322 (42%), Gaps = 19/322 (5%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
FD NS++ Y G++E ++FD +P R+ ++W +IS Y+ G+ A +F M
Sbjct: 79 FDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRM 138
Query: 82 P-------DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
D +I T ++N I E I F + +F G
Sbjct: 139 SQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGC- 197
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
LD+ R + ++ + ++ S+V Y G ID++ +F +D + W +M+
Sbjct: 198 --LDKARAV----FDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMM 251
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G R EAL ++ M G+ PD + +LT CA G +++G + + +N +
Sbjct: 252 NGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINENRV 310
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCGLSKTDADVAS 311
+++++ + G ++ A E + E + A W +L+ + G+S D+
Sbjct: 311 TVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMNGMSGRALDLYY 369
Query: 312 RATKRLLELDPLNAPGHVALCN 333
+ LD + + CN
Sbjct: 370 EMENVGVRLDAITFVAVLTACN 391
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/431 (30%), Positives = 226/431 (52%), Gaps = 46/431 (10%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQ----ELFDTVPIRNKIA 57
YS GL D+AS +G + D + +MI+G+V+ G +A E+ T N++
Sbjct: 148 YSSSGLFDFASRLFDGAEDK-DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT 206
Query: 58 WTCMISG----------------YLSAGQVFKACDLF----------------------D 79
++ YL G+V CD+F D
Sbjct: 207 VVSVLKAAGKVEDVRFGRSVHGLYLETGRV--KCDVFIGSSLVDMYGKCSCYDDAQKVFD 264
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
MP R+ + WT++I+GYVQ+ + + +F EM+ +P T + + A V L +
Sbjct: 265 EMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHR 324
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
GR++H +K E + +L+ +Y KCG ++++ +F + ++ +W +MI G +
Sbjct: 325 GRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAA 384
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
HG A +A ++ TML + P+ VTF+ VL+ACAH GLV++G LF SM + ++P D
Sbjct: 385 HGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKAD 444
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLE 319
HY +++L GR G +++A+ + R+P+EP + +WGAL G C L K D ++ A R+++
Sbjct: 445 HYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHK-DYELGKYAASRVIK 503
Query: 320 LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
L P ++ + L N+Y+ + E+ +RK+M+ + V K+PG SWI VKG++ F + D
Sbjct: 504 LQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDD 563
Query: 380 LEPHVEDILLQ 390
+P D L +
Sbjct: 564 KKPLESDDLYK 574
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 126/238 (52%), Gaps = 3/238 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+ISGY S+G A LFD D+D + WT+MI G+V+N +EA+ F EM G +
Sbjct: 144 LISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAAN 203
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T + A G V + GR +HG+ ++T + D+ + +SLV MY KC DD+ ++F
Sbjct: 204 EMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVF 263
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
M R+ ++W ++I G + + V+E ML+ + P+ T VL+ACAH G +
Sbjct: 264 DEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALH 323
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+G + M+ + ++ ++I+L + G +++A RL E N W A++
Sbjct: 324 RGRRVHCYMIKN-SIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-EKNVYTWTAMI 379
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 89 WTSMISGYVQNELIAEAISL--FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
W S+I + + +S + M +G P TF L A+ + Q H
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAH 128
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
VK + D + NSL+S Y+ G D + R+F +D ++W +MI G +G ASEA
Sbjct: 129 IVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEA 188
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG---FDHYI- 262
+ + M + G+ + +T + VL A AG V+ F V+ L+ G D +I
Sbjct: 189 MVYFVEMKKTGVAANEMTVVSVLKA---AGKVED--VRFGRSVHGLYLETGRVKCDVFIG 243
Query: 263 -SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
S++++ G+ DA++ +P N W AL+
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSR-NVVTWTALIA 279
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/360 (35%), Positives = 196/360 (54%), Gaps = 1/360 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N+M++ YV G L +A +F + + +AW MI G+ G + +A +LFD MP R+ +
Sbjct: 165 NTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGV 224
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W SMISG+V+N +A+ +F EM P T L A + +QGR +H
Sbjct: 225 SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYI 284
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
V+ +E + I+ +L+ MY KCG I++ +F + WNSMI+GL+++G A+
Sbjct: 285 VRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAM 344
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++ + GL PD+V+F+GVLTACAH+G V + E F M Y ++P HY ++N+
Sbjct: 345 DLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNV 404
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LG AG +++AE + +PVE + IW +L+ C + ++A RA K L +LDP G
Sbjct: 405 LGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACR-KIGNVEMAKRAAKCLKKLDPDETCG 463
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+V L N YA+ E R M+ + + K GCS I V VH F S P +I
Sbjct: 464 YVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEI 523
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 148/343 (43%), Gaps = 51/343 (14%)
Query: 48 DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAIS 107
DTV +A+ C S + A +F + ++ W ++I G+ ++ AIS
Sbjct: 56 DTVTASRVLAFCCA-----SPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAIS 110
Query: 108 LFGEMMAHGFS--PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
+F +M+ S P T+ +F A G + GRQLHGM +K E D + N+++ M
Sbjct: 111 IFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHM 170
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD-------------------------- 199
Y CG + +++RIF M D ++WNSMIMG +
Sbjct: 171 YVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMI 230
Query: 200 -----HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYG 253
+GR +AL ++ M E + PD T + +L ACA+ G ++G W ++ Y
Sbjct: 231 SGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW------IHEYI 284
Query: 254 LQPGFD-HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI--WGALV-GVC--GLSKTDA 307
++ F+ + I + L+ K EE + P + W +++ G+ G +
Sbjct: 285 VRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAM 344
Query: 308 DVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKE 350
D+ S + LE D ++ G + C R E L KE
Sbjct: 345 DLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKE 387
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 209/366 (57%), Gaps = 3/366 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D +I+ Y + G L+ ++F+++P + + T M++ G V A LF+ MP
Sbjct: 142 DPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMP 201
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV-LFGAMGSVAYLDQGR 141
+RD IAW +MISGY Q EA+++F M G +NG + + A + LDQGR
Sbjct: 202 ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVK-VNGVAMISVLSACTQLGALDQGR 260
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
H + + + L +LV +YAKCG+++ + +F M ++ +W+S + GL+ +G
Sbjct: 261 WAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNG 320
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+ L ++ M + G+ P+ VTF+ VL C+ G VD+G F+SM N +G++P +HY
Sbjct: 321 FGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHY 380
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++L RAG+++DA + ++P++P+ A+W +L+ + K + ++ A+K++LEL+
Sbjct: 381 GCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYK-NLELGVLASKKMLELE 439
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
N +V L NIYA ++ ++ +R+ M+ KGVRK PGCS + V G VH F GD+
Sbjct: 440 TANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSH 499
Query: 382 PHVEDI 387
P I
Sbjct: 500 PKYTQI 505
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 36/226 (15%)
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHG--FSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
A SMI + ++ + ++ + +++ G P N T L A + + G Q+HG
Sbjct: 73 ALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHG 132
Query: 146 MQVKTIYEYDLILENSLVSMY-------------------------------AKCGEIDD 174
M ++ ++ D ++ L+S+Y A+CG++
Sbjct: 133 MTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVF 192
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
+ ++F M RD I+WN+MI G + G + EAL V+ M G+ + V + VL+AC
Sbjct: 193 ARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQ 252
Query: 235 AGLVDKG-WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
G +D+G W +S + ++ ++++L + G ++ A E
Sbjct: 253 LGALDQGRWA--HSYIERNKIKITVRLATTLVDLYAKCGDMEKAME 296
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 231 bits (588), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 202/367 (55%), Gaps = 8/367 (2%)
Query: 29 SMINGYVQA-GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
++++ Y + + A++LFD + RN ++WT M+SGY +G + A LF+ MP+RD
Sbjct: 166 ALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVP 225
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
+W ++++ QN L EA+SLF M+ P T + A L + +H
Sbjct: 226 SWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAF 285
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
+ D+ + NSLV +Y KCG ++++ +F + + +WNSMI + HGR+ EA
Sbjct: 286 AYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEA 345
Query: 207 LTVYETMLEFGL---YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+ V+E M++ + PD +TF+G+L AC H GLV KG F+ M N +G++P +HY
Sbjct: 346 IAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGC 405
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+I+LLGRAG+ +A E + + ++ + AIWG+L+ C + D+A A K L+ L+P
Sbjct: 406 LIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKI-HGHLDLAEVAVKNLVALNPN 464
Query: 324 NAPGHVA-LCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
N G+VA + N+Y E RK ++ + K PG S I + VH F S D+ P
Sbjct: 465 NG-GYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHP 523
Query: 383 HVEDILL 389
E+I +
Sbjct: 524 ETEEIYM 530
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 231 bits (588), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 221/427 (51%), Gaps = 46/427 (10%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF------------- 47
MY+ G + YA + + D S NSMI+GY +AG + A +LF
Sbjct: 176 MYAKCGQVGYARKLFD-EITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDER 234
Query: 48 ---------------------DTVPIRNKIAWTC-----MISGYLSAGQVFKACDLFDSM 81
+ + I KI + +IS Y G + A +F+ M
Sbjct: 235 TLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM 294
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+D +AWT+MI+ Y QN +EA LF EM G SP GT + + A GSV L+ G+
Sbjct: 295 IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 354
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+ + ++++ + LV MY KCG ++++ R+F M +++ +WN+MI + G
Sbjct: 355 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQG 414
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
A EAL +++ M + P +TF+GVL+AC HAGLV +G F+ M + +GL P +HY
Sbjct: 415 HAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHY 471
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL- 320
+II+LL RAG + +A EF+ R P +P+ + A++G C + D + +A + L+E+
Sbjct: 472 TNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACH-KRKDVAIREKAMRMLMEMK 530
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG-DR 379
+ NA +V N+ A E +R MR +GV K PGCSWI ++G + F +G D
Sbjct: 531 EAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDY 590
Query: 380 LEPHVED 386
L+ ED
Sbjct: 591 LQCGRED 597
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 128/237 (54%), Gaps = 2/237 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y GQV A LFD + +RD+++W SMISGY + +A+ LF +M GF P
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPD 232
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + GA + L GR L M + L + L+SMY KCG++D + R+F+
Sbjct: 233 ERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFN 292
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M +D+++W +MI S +G++SEA ++ M + G+ PD T VL+AC G ++
Sbjct: 293 QMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALEL 352
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G ++ + + LQ ++++ G+ G+V++A +PV+ N A W A++
Sbjct: 353 GKQI-ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK-NEATWNAMI 407
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 135/317 (42%), Gaps = 40/317 (12%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEA-ISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
LF + + ++ MI G EA +SL+ M G P T+ +F A +
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+ GR +H K E D+ + +SL+ MYAKCG++ + ++F + RD +SWNSMI
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 206
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G S+ G A +A+ ++ M E G PD T + +L AC+H G + G L M
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG-RLLEEM------- 258
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 315
I + LG + ++ G CG D D A R
Sbjct: 259 -AITKKIGLSTFLG---------------------SKLISMYGKCG----DLDSARRVFN 292
Query: 316 RLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK--GRVHV 373
++++ D + A+ +Y+ N + E L EM GV G ++ G V
Sbjct: 293 QMIKKDRV---AWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGA 349
Query: 374 FSSGDRLEPHVEDILLQ 390
G ++E H ++ LQ
Sbjct: 350 LELGKQIETHASELSLQ 366
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 204/367 (55%), Gaps = 5/367 (1%)
Query: 25 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 84
++ NS+++ Y + G + A +++ + +++W +I + G+ KA ++F P++
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK 300
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
+ + WT+MI+GY +N +A+ F EMM G + + + A +A L G+ +H
Sbjct: 301 NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIH 360
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
G + ++ + N+LV++YAKCG+I ++ R F ++A +D +SWN+M+ HG A
Sbjct: 361 GCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLAD 420
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
+AL +Y+ M+ G+ PD VTF+G+LT C+H+GLV++G +F SMV Y + DH +
Sbjct: 421 QALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCM 480
Query: 265 INLLGRAGKVKDAEEFVLR----LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
I++ GR G + +A++ + N++ W L+G C + ++ +K L
Sbjct: 481 IDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACS-THWHTELGREVSKVLKIA 539
Query: 321 DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRL 380
+P V L N+Y + R E +R+EM +G++K PGCSWI V +V F GD
Sbjct: 540 EPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSS 599
Query: 381 EPHVEDI 387
P +E++
Sbjct: 600 HPRLEEL 606
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 49/292 (16%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPI--RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
NS+I+ Y + A ++F + RN++ W ++ Y++A Q A D+F MP R
Sbjct: 109 NSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRV 168
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS----VAYLDQGR 141
+ AW MISG+ + +SLF EM+ F P TF+ L A + V Y GR
Sbjct: 169 AFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVY---GR 225
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS--------- 192
+H + +K + + +NS++S Y K G DD+ R ++ ++SWNS
Sbjct: 226 MVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIG 285
Query: 193 ----------------------MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
MI G +G +AL + M++ G+ D + VL
Sbjct: 286 ETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLH 345
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAE 278
AC+ L+ G M++ + GF Y +++NL + G +K+A+
Sbjct: 346 ACSGLALLGHG-----KMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEAD 392
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 125/279 (44%), Gaps = 42/279 (15%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T I+ +G++ A +FD MP+ D++AW +M++ Y + L EAI+LF ++
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + +F + S+ + GR++ + +++ + L + NSL+ MY KC + + ++
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 179 FSNM---------------AY------------------RDKISWNSMIMGLSDHGRASE 205
F +M AY R +WN MI G + G+
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--- 262
L++++ MLE PD TF ++ AC+ D ++ MV++ L+ G+ +
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACS----ADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 263 -SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
S+++ + G DA + + V W +++ C
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDAC 281
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
Query: 156 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 215
L+ S ++ AK G I + ++F M D ++WN+M+ S G EA+ ++ +
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 216 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 275
PD +F +L+ CA G V G ++ S+V G S+I++ G+
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 276 DAEEFVLRLPVEP-NHAIWGALV 297
A + + + N W +L+
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLL 145
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 227 bits (579), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 187/326 (57%), Gaps = 1/326 (0%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I+ Y+ G V LFD MP + I W ++ISGY QN L + + L+ +M + G P
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
T + + + G ++ + + ++ + N+ +SMYA+CG + + +F
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
M + +SW +MI HG L +++ M++ G+ PD F+ VL+AC+H+GL DKG
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 242 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
ELF +M Y L+PG +HY +++LLGRAG++ +A EF+ +PVEP+ A+WGAL+G C
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 302 LSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 361
+ K + D+A A +++E +P N +V + NIY+ + + +R MR + RK PG
Sbjct: 438 IHK-NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPG 496
Query: 362 CSWILVKGRVHVFSSGDRLEPHVEDI 387
S++ KGRVH+F +GDR E++
Sbjct: 497 YSYVEHKGRVHLFLAGDRSHEQTEEV 522
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 4/246 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRD--SIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
T +IS Y G V A +F+ P S+ + ++ISGY N + +A +F M G
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
S + T L YL GR LHG VK + ++ + NS ++MY KCG ++
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
R+F M + I+WN++I G S +G A + L +YE M G+ PD T + VL++CAH G
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
G E+ +V S G P + I++ R G + A +PV+ + W A+
Sbjct: 272 AKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK-SLVSWTAM 329
Query: 297 VGVCGL 302
+G G+
Sbjct: 330 IGCYGM 335
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 4/214 (1%)
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
S W + L +E+ISL+ M+ G SP +F + + S++ G+QLH
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS--WNSMIMGLSDHGRA 203
K E + + +L+SMY KCG + D+ ++F ++S +N++I G + + +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
++A ++ M E G+ D+VT LG++ C + G L V GL S
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG-GLDSEVAVLNS 196
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
I + + G V+ +PV+ W A++
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVK-GLITWNAVI 229
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 207/360 (57%), Gaps = 3/360 (0%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
+++ Y + G + AQ++FD +P R+ ++ T MI+ Y G V A LFDSM +RD ++W
Sbjct: 167 LVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSW 226
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGF-SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
MI GY Q+ +A+ LF +++A G P T A + L+ GR +H
Sbjct: 227 NVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVK 286
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
+ ++ + L+ MY+KCG ++++ +F++ +D ++WN+MI G + HG + +AL
Sbjct: 287 SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALR 346
Query: 209 VYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++ M GL P +TF+G L ACAHAGLV++G +F SM YG++P +HY +++L
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSL 406
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LGRAG++K A E + + ++ + +W +++G C L D + + L+ L+ N+
Sbjct: 407 LGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKL-HGDFVLGKEIAEYLIGLNIKNSGI 465
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+V L NIYA+ + + +R M+ KG+ K PG S I ++ +VH F +GDR ++I
Sbjct: 466 YVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEI 525
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 115/270 (42%), Gaps = 44/270 (16%)
Query: 64 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 123
Y S G++ + LF D D +T+ I+ N L +A L+ ++++ +P T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI----- 178
F+ L + + G+ +H +K D + LV +YAK G++ + ++
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 179 --------------------------FSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 212
F +M RD +SWN MI G + HG ++AL +++
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 213 MLEFGL-YPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPGFDHYISIINLLGR 270
+L G PD +T + L+AC+ G ++ G W + V S ++ +I++ +
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRW--IHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 271 AGKVKDAEEFVLRLPVEPNHAI--WGALVG 298
G + EE VL P I W A++
Sbjct: 307 CGSL---EEAVLVFNDTPRKDIVAWNAMIA 333
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 195/355 (54%), Gaps = 7/355 (1%)
Query: 24 DQSL---NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
DQ L NS+++ Y G L+ A++LF +P R+ ++W +I+G + G V A LFD
Sbjct: 150 DQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDE 209
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
MPD++ I+W MIS Y+ +ISLF EM+ GF T +L A G A L +G
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEG 269
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
R +H ++T ++++ +L+ MY KC E+ + RIF +++ R+K++WN MI+ H
Sbjct: 270 RSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLH 329
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
GR L ++E M+ L PD VTF+GVL CA AGLV +G ++ MV+ + ++P F H
Sbjct: 330 GRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGH 389
Query: 261 YISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
+ NL AG ++AEE + LP V P W L+ + + + K L
Sbjct: 390 QWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFT-GNPTLGESIAKSL 448
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVH 372
+E DPLN + L NIY+ R ++ +R+ ++ + + + PGC + +K VH
Sbjct: 449 IETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
+S Y S G+++ A +F + Y+ + +A+ + +++ GF P +
Sbjct: 74 VSIYRSIGKLYCANPVFKA---------------YLVSSSPKQALGFYFDILRFGFVPDS 118
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
TF L + +D G+ HG +K + L ++NSL+ MY CG +D + ++F
Sbjct: 119 YTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVE 178
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
+ RD +SWNS+I G+ +G A +++ M PD + A+ G + G
Sbjct: 179 IPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEM------PDKNIISWNIMISAYLGANNPG 232
Query: 242 --WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
LF MV + G Q + ++N GR+ ++K+
Sbjct: 233 VSISLFREMVRA-GFQGNESTLVLLLNACGRSARLKEGR 270
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 210/405 (51%), Gaps = 42/405 (10%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIA------------------------- 57
D S NS+I+GY+Q+G L +A +LF + I + A
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 431
Query: 58 --------------WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 103
+I Y G+V + +F SM D++ W ++IS V+ A
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 163
+ + +M P TF V S+A G+++H ++ YE +L + N+L+
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551
Query: 164 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 223
MY+KCG +++S R+F M+ RD ++W MI +G +AL + M + G+ PD+V
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 283
F+ ++ AC+H+GLVD+G F M Y + P +HY +++LL R+ K+ AEEF+
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQA 671
Query: 284 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALC-NIYAANDRHI 342
+P++P+ +IW +++ C S D + A R ++R++EL+P + PG+ L N YAA +
Sbjct: 672 MPIKPDASIWASVLRACRTS-GDMETAERVSRRIIELNP-DDPGYSILASNAYAALRKWD 729
Query: 343 ELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+++ +RK ++ K + K PG SWI V VHVFSSGD P E I
Sbjct: 730 KVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAI 774
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 116/224 (51%), Gaps = 1/224 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + A D+F+SM +D+++W S+ISGY+Q+ + EA+ LF MM
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ T+ +L +A L G+ LH +K+ DL + N+L+ MYAKCGE+ DS +IFS
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS 467
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+M D ++WN++I G + L V M + + PD TFL L CA
Sbjct: 468 SMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRL 527
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
G E+ ++ +G + ++I + + G ++++ R+
Sbjct: 528 GKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERM 570
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 8/209 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y G + +A +FD MP RD ++W S+ISGY + EA+ ++ E+ P
Sbjct: 147 LVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPD 206
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ T + + A G++ + QG+ LHG +K+ +++ N LV+MY K D+ R+F
Sbjct: 207 SFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFD 266
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVY-ETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
M RD +S+N+MI G E++ ++ E + +F PD +T VL AC H +
Sbjct: 267 EMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK--PDLLTVSSVLRACGHLRDLS 324
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLL 268
++N Y L+ GF ++ N+L
Sbjct: 325 LAKYIYN-----YMLKAGFVLESTVRNIL 348
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 151/343 (44%), Gaps = 51/343 (14%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
MYS GL+ A + + D S NS+I+GY G E+A E++ + K +W
Sbjct: 150 MYSRMGLLTRARQVFD-EMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL----KNSWIV 204
Query: 61 -------------------------------------------MISGYLSAGQVFKACDL 77
+++ YL + A +
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRV 264
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
FD M RDS+++ +MI GY++ E++ E++ +F E + F P T + + A G + L
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDL 323
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
+ ++ +K + + + N L+ +YAKCG++ + +F++M +D +SWNS+I G
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
G EA+ +++ M+ D +T+L +++ + G L ++ + S G+
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GICID 442
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
++I++ + G+V D+ + + + W ++ C
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVISAC 484
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%)
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
P ++ W S+I + +N L EA+ +G++ SP TF + A + + G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
++ + +E DL + N+LV MY++ G + + ++F M RD +SWNS+I G S HG
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
EAL +Y + + PD+ T VL A + +V +G
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 210/382 (54%), Gaps = 5/382 (1%)
Query: 10 YASNALEGNLNNFDDQ----SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGY 65
Y + G+L F + + N++I+ Y++ L A ++FD + R+ I+W ++SGY
Sbjct: 126 YLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGY 185
Query: 66 LSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 125
GQ+ KA LF M D+ ++WT+MISGY EA+ F EM G P +
Sbjct: 186 ARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLI 245
Query: 126 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 185
+ + + L+ G+ +H + + + N+L+ MY+KCG I + ++F M +
Sbjct: 246 SVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK 305
Query: 186 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 245
D ISW++MI G + HG A A+ + M + P+ +TFLG+L+AC+H G+ +G F
Sbjct: 306 DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYF 365
Query: 246 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT 305
+ M Y ++P +HY +I++L RAGK++ A E +P++P+ IWG+L+ C +
Sbjct: 366 DMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCR-TPG 424
Query: 306 DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
+ DVA A L+EL+P + +V L NIYA + +++ LRK +R + ++K PG S I
Sbjct: 425 NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484
Query: 366 LVKGRVHVFSSGDRLEPHVEDI 387
V V F SGD +P +I
Sbjct: 485 EVNNIVQEFVSGDNSKPFWTEI 506
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 37/227 (16%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMG 132
A LF+ + + + + S+I Y N L + I ++ +++ F P TF +F +
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 133 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 192
S+ G+Q+HG K + ++ EN+L+ MY K ++ D++++F M RD ISWNS
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 180
Query: 193 MIMGLSDHGRASEALTVYETMLE-------------------------------FGLYPD 221
++ G + G+ +A ++ ML+ G+ PD
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 222 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
++ + VL +CA G ++ G ++ Y + GF + N L
Sbjct: 241 EISLISVLPSCAQLGSLELG-----KWIHLYAERRGFLKQTGVCNAL 282
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 197/338 (58%), Gaps = 2/338 (0%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D S NS+++ Y++ G +++A+ LFD + RN +W MISGY +AG V +A ++FDSMP
Sbjct: 205 DAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMP 264
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGR 141
RD ++W +M++ Y E + +F +M+ +G T + A S+ L QG
Sbjct: 265 VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+H K E + L +LV MY+KCG+ID + +F + RD +WNS+I LS HG
Sbjct: 325 WVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHG 384
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+AL ++ M+ G P+ +TF+GVL+AC H G++D+ +LF M + Y ++P +HY
Sbjct: 385 LGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHY 444
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++LLGR GK+++AEE V +P + + +L+G C + A R RLLEL+
Sbjct: 445 GCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACK-RFGQLEQAERIANRLLELN 503
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
++ G+ + N+YA++ R ++ R+ MR + V ++
Sbjct: 504 LRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 150
S+I Y + A+++F EM+ P +F + A + ++GRQ+HG+ +K+
Sbjct: 110 SVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKS 169
Query: 151 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 210
D+ +EN+LV++Y + G + + ++ M RD +SWNS++ + G EA ++
Sbjct: 170 GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALF 229
Query: 211 ETMLE-------------------------FGLYP--DTVTFLGVLTACAHAGLVDKGWE 243
+ M E F P D V++ ++TA AH G ++ E
Sbjct: 230 DEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLE 289
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
+FN M++ +P +S+++ G + E
Sbjct: 290 VFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE---IDDSYRIFSNMAYRDKISWNSM 193
L + +Q H +KT +D + LV+ A E + ++ I + + + + NS+
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I ++ ALTV+ ML ++PD +F VL ACA ++G ++ + S G
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKS-G 170
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
L +++N+ GR+G + A + + R+PV + W +L+
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLL 213
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 188/328 (57%), Gaps = 4/328 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + ++ + +FD WT+++SGY N+ +A+S+F M+ + P
Sbjct: 266 LITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPN 325
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TFA + ++ LD G+++HG+ VK E D + NSLV MY+ G ++D+ +F
Sbjct: 326 QSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFI 385
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ + +SWNS+I+G + HGR A ++ M+ PD +TF G+L+AC+H G ++K
Sbjct: 386 KIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEK 445
Query: 241 GWELFNSMVNSYG-LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
G +LF M + + HY ++++LGR GK+K+AEE + R+ V+PN +W AL+
Sbjct: 446 GRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C + +D D +A + LD ++ +V L NIYA+ R ++ LR +M+ G+ K
Sbjct: 506 CRM-HSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKK 564
Query: 360 PGCSWILVKGRVHVFSSGDRLEPHVEDI 387
PG SW++++G+ H F SGD +PH I
Sbjct: 565 PGSSWVVIRGKKHEFFSGD--QPHCSRI 590
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 145/278 (52%), Gaps = 6/278 (2%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S +M+NG ++G++++A+ LF +P+++ AW M+ GYL G+V A LF MP ++
Sbjct: 130 SWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKN 189
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
I+WT+MI G QNE EA+ LF M+ + F + A + G Q+HG
Sbjct: 190 VISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHG 249
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+ +K + Y+ + SL++ YA C I DS ++F + W +++ G S + + +
Sbjct: 250 LIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHED 309
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--S 263
AL+++ ML + P+ TF L +C+ G +D G E+ V GL+ D ++ S
Sbjct: 310 ALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK-LGLET--DAFVGNS 366
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
++ + +G V DA +++ + + W +++ C
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCA 403
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 24/294 (8%)
Query: 25 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 84
Q+ +I ++ + ++++A+E+F+ VP + +T MI+GY + ++ A +LFD MP R
Sbjct: 36 QNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR 95
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGF----SPLNGTFAVLFGAMGSVAYLDQG 140
D ++W SMISG V+ + A+ LF EM + +NG F +DQ
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCF--------RSGKVDQA 147
Query: 141 RQL-HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
+L + M VK D NS+V Y + G++DD+ ++F M ++ ISW +MI GL
Sbjct: 148 ERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQ 202
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
+ R+ EAL +++ ML + + F V+TACA+A G ++ ++ L ++
Sbjct: 203 NERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIK---LGFLYE 259
Query: 260 HYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 311
Y+ S+I ++ D+ + V V A+W AL+ L+K D S
Sbjct: 260 EYVSASLITFYANCKRIGDSRK-VFDEKVHEQVAVWTALLSGYSLNKKHEDALS 312
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 219/426 (51%), Gaps = 41/426 (9%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTV------PI-- 52
MY+ G ++ A +G L + S NSMI+ YVQ ++A +F + P
Sbjct: 280 MYAKCGSLETARQLFDGMLER-NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 53 -------------------------------RNKIAWTCMISGYLSAGQVFKACDLFDSM 81
RN +IS Y +V A +F +
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
R ++W +MI G+ QN +A++ F +M + P T+ + A+ ++ +
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 458
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+HG+ +++ + ++ + +LV MYAKCG I + IF M+ R +WN+MI G HG
Sbjct: 459 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 518
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
AL ++E M + + P+ VTFL V++AC+H+GLV+ G + F M +Y ++ DHY
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 578
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
++++LLGRAG++ +A +F++++PV+P ++GA++G C + K + + A +A +RL EL+
Sbjct: 579 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHK-NVNFAEKAAERLFELN 637
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
P + HV L NIY A ++ +R M +G+RK PGCS + +K VH F SG
Sbjct: 638 PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAH 697
Query: 382 PHVEDI 387
P + I
Sbjct: 698 PDSKKI 703
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 123/239 (51%), Gaps = 2/239 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G + A LFD M +R+ ++W SMI YVQNE EA+ +F +M+ G
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + + A + L++GR +H + V+ + ++ + NSL+SMY KC E+D + +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + R +SWN+MI+G + +GR +AL + M + PDT T++ V+TA A +
Sbjct: 395 FGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSIT 454
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ + +V L +++++ + G + A + + E + W A++
Sbjct: 455 HHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMI 511
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 117/212 (55%), Gaps = 5/212 (2%)
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
A T + + Y QV +A +FD MP+RD ++W ++++GY QN + A+ + M
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
P T + A+ ++ + G+++HG +++ ++ + + +LV MYAKCG ++ +
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
++F M R+ +SWNSMI + EA+ +++ ML+ G+ P V+ +G L ACA G
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
+++G ++ ++ G D +S++N L
Sbjct: 352 DLERG-----RFIHKLSVELGLDRNVSVVNSL 378
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 127/243 (52%), Gaps = 10/243 (4%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++S + G V +A +F+ + + ++ + +M+ G+ + + +A+ F M
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P+ F L G A L G+++HG+ VK+ + DL L +MYAKC +++++ ++
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M RD +SWN+++ G S +G A AL + ++M E L P +T + VL A + L+
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
G E ++ Y ++ GFD ++I +++ + G ++ A + + +E N W
Sbjct: 253 SVGKE-----IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWN 306
Query: 295 ALV 297
+++
Sbjct: 307 SMI 309
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 224 bits (572), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 188/331 (56%), Gaps = 1/331 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y G + + DLF+ + +R+ I W +M++ + E + L +M + G S
Sbjct: 505 LITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLD 564
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+F+ A +A L++G+QLHG+ VK +E+D + N+ MY+KCGEI + ++
Sbjct: 565 QFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLP 624
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
R SWN +I L HG E + MLE G+ P VTF+ +LTAC+H GLVDK
Sbjct: 625 PSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDK 684
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G ++ + +GL+P +H I +I+LLGR+G++ +AE F+ ++P++PN +W +L+ C
Sbjct: 685 GLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASC 744
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ + D +A + L +L+P + +V N++A R ++ ++RK+M K ++K
Sbjct: 745 KI-HGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQ 803
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
CSW+ +K +V F GDR P +I ++
Sbjct: 804 ACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 834
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 141/288 (48%), Gaps = 12/288 (4%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N+I ++S Y G++ ++ + MP RD +AW ++I GY ++E +A++ F M
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455
Query: 114 AHGFSPLNGTF-AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
G S T +VL + L++G+ LH V +E D ++NSL++MYAKCG++
Sbjct: 456 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 515
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
S +F+ + R+ I+WN+M+ + HG E L + M FG+ D +F L+A
Sbjct: 516 SSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAA 575
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA-GKVKDAEEFVLRLPVEPNHA 291
A ++++G +L + ++ GF+H I N K + E V LP N +
Sbjct: 576 AKLAVLEEGQQL-----HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRS 630
Query: 292 I--WGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 337
+ W L+ G +V + +LE+ PGHV ++ A
Sbjct: 631 LPSWNILISALGRHGYFEEVCA-TFHEMLEMGI--KPGHVTFVSLLTA 675
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 19/280 (6%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
D+SL I G V LE + + N +IS S G V A +FD M
Sbjct: 173 LKDESLGRQIIGQVVKSGLE------SKLAVENS-----LISMLGSMGNVDYANYIFDQM 221
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+RD+I+W S+ + Y QN I E+ +F M + T + L +G V + GR
Sbjct: 222 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 281
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+HG+ VK ++ + + N+L+ MYA G ++ +F M +D ISWNS++ + G
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 341
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
R+ +AL + +M+ G + VTF L AC +KG + + +V GL F +
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGL---FYNQ 397
Query: 262 I---SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
I +++++ G+ G++ ++ +L++P + W AL+G
Sbjct: 398 IIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 436
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 10/221 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y AG+ +A +F MP +D I+W S+++ +V + +A+ L M++ G S TF
Sbjct: 306 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 365
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A + + ++GR LHG+ V + Y+ I+ N+LVSMY K GE+ +S R+ M
Sbjct: 366 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 425
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG-LVDKGWE 243
RD ++WN++I G ++ +AL ++TM G+ + +T + VL+AC G L+++G
Sbjct: 426 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 485
Query: 244 LFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEF 280
L ++Y + GF D ++ S+I + + G + +++
Sbjct: 486 L-----HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 521
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 112/233 (48%), Gaps = 9/233 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G V + +F+ MPDR+ ++WTS++ GY E I ++ M G
Sbjct: 98 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVG 157
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ +++ + G + GRQ+ G VK+ E L +ENSL+SM G +D + I
Sbjct: 158 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 217
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M+ RD ISWNS+ + +G E+ ++ M F ++ T +L+ H V
Sbjct: 218 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH---V 274
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGR----AGKVKDAEEFVLRLPVE 287
D + + ++ ++ GFD + + N L R AG+ +A ++P +
Sbjct: 275 DH--QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 325
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G+V A LFD MP R+ ++W +M+SG V+ L E + F +M G P +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 125 AVLFGAMG-SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
A L A G S + +G Q+HG K+ D+ + +++ +Y G + S ++F M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
R+ +SW S+++G SD G E + +Y+ M G+ + + V+++C G +
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
+ +V S GL+ S+I++LG G V D ++ E + W ++
Sbjct: 182 IIGQVVKS-GLESKLAVENSLISMLGSMGNV-DYANYIFDQMSERDTISWNSI 232
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 224
MY K G + + +F M R+++SWN+M+ G+ G E + + M + G+ P +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAEEFVL 282
++TAC +G + + + V GL D Y+S I++L G G V + +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLS--DVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 283 RLPVEPNHAIWGALV 297
+P + N W +L+
Sbjct: 119 EMP-DRNVVSWTSLM 132
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 224 bits (572), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 188/331 (56%), Gaps = 1/331 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y G + + DLF+ + +R+ I W +M++ + E + L +M + G S
Sbjct: 488 LITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLD 547
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+F+ A +A L++G+QLHG+ VK +E+D + N+ MY+KCGEI + ++
Sbjct: 548 QFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLP 607
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
R SWN +I L HG E + MLE G+ P VTF+ +LTAC+H GLVDK
Sbjct: 608 PSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDK 667
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G ++ + +GL+P +H I +I+LLGR+G++ +AE F+ ++P++PN +W +L+ C
Sbjct: 668 GLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASC 727
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ + D +A + L +L+P + +V N++A R ++ ++RK+M K ++K
Sbjct: 728 KI-HGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQ 786
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
CSW+ +K +V F GDR P +I ++
Sbjct: 787 ACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 817
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 141/288 (48%), Gaps = 12/288 (4%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N+I ++S Y G++ ++ + MP RD +AW ++I GY ++E +A++ F M
Sbjct: 379 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 438
Query: 114 AHGFSPLNGTF-AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
G S T +VL + L++G+ LH V +E D ++NSL++MYAKCG++
Sbjct: 439 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 498
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
S +F+ + R+ I+WN+M+ + HG E L + M FG+ D +F L+A
Sbjct: 499 SSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAA 558
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA-GKVKDAEEFVLRLPVEPNHA 291
A ++++G +L + ++ GF+H I N K + E V LP N +
Sbjct: 559 AKLAVLEEGQQL-----HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRS 613
Query: 292 I--WGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 337
+ W L+ G +V + +LE+ PGHV ++ A
Sbjct: 614 LPSWNILISALGRHGYFEEVCA-TFHEMLEMGI--KPGHVTFVSLLTA 658
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 19/280 (6%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
D+SL I G V LE + + N +IS S G V A +FD M
Sbjct: 156 LKDESLGRQIIGQVVKSGLE------SKLAVENS-----LISMLGSMGNVDYANYIFDQM 204
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+RD+I+W S+ + Y QN I E+ +F M + T + L +G V + GR
Sbjct: 205 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+HG+ VK ++ + + N+L+ MYA G ++ +F M +D ISWNS++ + G
Sbjct: 265 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 324
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
R+ +AL + +M+ G + VTF L AC +KG + + +V GL F +
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGL---FYNQ 380
Query: 262 I---SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
I +++++ G+ G++ ++ +L++P + W AL+G
Sbjct: 381 IIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 419
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 10/221 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y AG+ +A +F MP +D I+W S+++ +V + +A+ L M++ G S TF
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 348
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
A + + ++GR LHG+ V + Y+ I+ N+LVSMY K GE+ +S R+ M
Sbjct: 349 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 408
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG-LVDKGWE 243
RD ++WN++I G ++ +AL ++TM G+ + +T + VL+AC G L+++G
Sbjct: 409 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 468
Query: 244 LFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEF 280
L ++Y + GF D ++ S+I + + G + +++
Sbjct: 469 L-----HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 504
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 112/233 (48%), Gaps = 9/233 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G V + +F+ MPDR+ ++WTS++ GY E I ++ M G
Sbjct: 81 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVG 140
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ +++ + G + GRQ+ G VK+ E L +ENSL+SM G +D + I
Sbjct: 141 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 200
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M+ RD ISWNS+ + +G E+ ++ M F ++ T +L+ H V
Sbjct: 201 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH---V 257
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGR----AGKVKDAEEFVLRLPVE 287
D + + ++ ++ GFD + + N L R AG+ +A ++P +
Sbjct: 258 DH--QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 308
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 106/217 (48%), Gaps = 3/217 (1%)
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMG-SVAYLDQ 139
MP R+ ++W +M+SG V+ L E + F +M G P + A L A G S + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G Q+HG K+ D+ + +++ +Y G + S ++F M R+ +SW S+++G SD
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
G E + +Y+ M G+ + + V+++C G ++ +V S GL+
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLA 179
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
S+I++LG G V D ++ E + W ++
Sbjct: 180 VENSLISMLGSMGNV-DYANYIFDQMSERDTISWNSI 215
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 224 bits (570), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 194/331 (58%), Gaps = 3/331 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM--AHG 116
T ++ Y G V A +F MP R+ ++W++MI+ Y +N EA+ F EMM
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
SP + T + A S+A L+QG+ +HG ++ + L + ++LV+MY +CG+++
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQ 340
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
R+F M RD +SWNS+I HG +A+ ++E ML G P VTF+ VL AC+H G
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
LV++G LF +M +G++P +HY +++LLGRA ++ +A + V + EP +WG+L
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+G C + + ++A RA++RL L+P NA +V L +IYA E+ ++K + +G+
Sbjct: 461 LGSCRIH-GNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL 519
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+K PG W+ V+ +++ F S D P +E I
Sbjct: 520 QKLPGRCWMEVRRKMYSFVSVDEFNPLMEQI 550
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 118/254 (46%), Gaps = 16/254 (6%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y G V A +FD R W ++ E + L+ +M G
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 175
Query: 119 PLNGTFAVLFGAM----GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
T+ + A +V +L +G+++H + Y + + +LV MYA+ G +D
Sbjct: 176 SDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDY 235
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL--YPDTVTFLGVLTAC 232
+ +F M R+ +SW++MI + +G+A EAL + M+ P++VT + VL AC
Sbjct: 236 ASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC 295
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEP 288
A +++G +++ Y L+ G D + +I+ L GR GK++ + R+ +
Sbjct: 296 ASLAALEQG-----KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH-DR 349
Query: 289 NHAIWGALVGVCGL 302
+ W +L+ G+
Sbjct: 350 DVVSWNSLISSYGV 363
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 93/224 (41%), Gaps = 7/224 (3%)
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
SP T+ +L G + L ++H + + D L L+ MY+ G +D + +
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F R WN++ L+ G E L +Y M G+ D T+ VL AC A
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV-ASE 192
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
+ ++++ + G+ ++ +++++ R G V A +PV N W
Sbjct: 193 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSW 251
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 337
A++ C A A R + ++ ++P V + ++ A
Sbjct: 252 SAMIA-CYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQA 294
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 200/363 (55%), Gaps = 13/363 (3%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S+ I+GY LE D V + + +A M +G L G++ + SMP R+
Sbjct: 108 SIGQQIHGYTIKYGLE-----LDLV-VNSSLAHMYMRNGKLQDGEI-----VIRSMPVRN 156
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+AW ++I G QN + L+ M G P TF + + +A QG+Q+H
Sbjct: 157 LVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHA 216
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+K + + +SL+SMY+KCG + D+ + FS D++ W+SMI HG+ E
Sbjct: 217 EAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDE 276
Query: 206 ALTVYETMLE-FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
A+ ++ TM E + + V FL +L AC+H+GL DKG ELF+ MV YG +PG HY +
Sbjct: 277 AIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV 336
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
++LLGRAG + AE + +P++ + IW L+ C + K +A++A R K +L++DP +
Sbjct: 337 VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHK-NAEMAQRVFKEILQIDPND 395
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 384
+ +V L N++A+ R +++ +RK MR K V+K G SW KG VH F GDR +
Sbjct: 396 SACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKS 455
Query: 385 EDI 387
++I
Sbjct: 456 KEI 458
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 137/269 (50%), Gaps = 2/269 (0%)
Query: 34 YVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMI 93
Y + G A ++ + +N ++ +I+GY+ AG + A +FD MPDR W +MI
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 94 SGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 153
+G +Q E E +SLF EM GFSP T +F + + G+Q+HG +K E
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 154 YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM 213
DL++ +SL MY + G++ D + +M R+ ++WN++IMG + +G L +Y+ M
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 214 LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGK 273
G P+ +TF+ VL++C+ + +G ++ + G S+I++ + G
Sbjct: 184 KISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLISMYSKCGC 242
Query: 274 VKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
+ DA + E + +W +++ G
Sbjct: 243 LGDAAKAFSEREDE-DEVMWSSMISAYGF 270
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 200/361 (55%), Gaps = 7/361 (1%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDL 77
D+ + S++ A LE+ ++L + ++ N +I+ Y V A +
Sbjct: 128 DNYTFPSLLKACAVAKALEEGRQLH-CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCV 186
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
FD + + + + +MI+GY + EA+SLF EM P T + + + L
Sbjct: 187 FDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSL 246
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
D G+ +H K + + + +L+ M+AKCG +DD+ IF M Y+D +W++MI+
Sbjct: 247 DLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAY 306
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
++HG+A +++ ++E M + PD +TFLG+L AC+H G V++G + F+ MV+ +G+ P
Sbjct: 307 ANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPS 366
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
HY S+++LL RAG ++DA EF+ +LP+ P +W L+ C S + D+A + ++R+
Sbjct: 367 IKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS-SHNNLDLAEKVSERI 425
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG 377
ELD + +V L N+YA N + + SLRK M+ + K PGCS I V VH F SG
Sbjct: 426 FELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSG 485
Query: 378 D 378
D
Sbjct: 486 D 486
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 12/226 (5%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LF++M + D + + SM GY + E SLF E++ G P N TF L A
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L++GRQLH + +K + ++ + +L++MY +C ++D + +F + + +N+MI G
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITG 204
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQ 255
+ R +EAL+++ M L P+ +T L VL++CA G +D G W ++ Y +
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW------IHKYAKK 258
Query: 256 PGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
F Y+ + I++ + G + DA ++ + A W A++
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQA-WSAMI 303
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 186/327 (56%), Gaps = 1/327 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS ++ + ++ A F+S+ +++ +++ + + G +N +A L E+
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TFA L + +V + +G Q+H VK + + N+L+SMY+KCG ID + R+F+
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M R+ ISW SMI G + HG A L + M+E G+ P+ VT++ +L+AC+H GLV +
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
GW FNSM + ++P +HY +++LL RAG + DA EF+ +P + + +W +G C
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ ++ ++ A +++LELDP ++ L NIYA + E T +R++M+ + + K
Sbjct: 654 RV-HSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEG 712
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDI 387
GCSWI V ++H F GD P+ I
Sbjct: 713 GCSWIEVGDKIHKFYVGDTAHPNAHQI 739
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 4/231 (1%)
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQN-ELIAEAISLFGEMMAHG-FSPLNGTFAV 126
G V +FD M D ++WT++I+GY++N L EAI+LF EM+ G P + TF+
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 186
F A G+++ G+Q+ G K + + NS++SM+ K ++D+ R F +++ ++
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 246
+S+N+ + G + +A + + E L TF +L+ A+ G + KG E +
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG-EQIH 497
Query: 247 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
S V GL ++I++ + G + A V N W +++
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASR-VFNFMENRNVISWTSMI 547
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 8/211 (3%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A +FD M + + + WT MI+ +Q EAI F +M+ GF T + +F A
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC---GEIDDSYRIFSNMAYRDKISW 190
+ L G+QLH +++ D +E SLV MYAKC G +DD ++F M +SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 191 NSMIMG-LSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
++I G + + A+EA+ ++ M+ G + P+ TF AC + G ++
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 249 VNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
GL S+I++ ++ +++DA+
Sbjct: 400 FKR-GLASNSSVANSVISMFVKSDRMEDAQR 429
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 143/294 (48%), Gaps = 30/294 (10%)
Query: 23 DDQSLNSMINGYVQA-----GQLEKAQEL-FDTVPIRNKIAWTCMISGYLSAGQVFKACD 76
D + +S++ ++A G+L A+ + FD P + + + +IS Y +G KA D
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP--DSVLYNSLISLYSKSGDSAKAED 118
Query: 77 LFDSMP---DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
+F++M RD ++W++M++ Y N +AI +F E + G P + + + A +
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 134 VAYLDQGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGE--IDDSYRIFSNMAYRDKISW 190
++ GR G +KT +E D+ + SL+ M+ K GE +++Y++F M+ + ++W
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTW 237
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
MI G EA+ + M+ G D T V +ACA + G +L +
Sbjct: 238 TLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL-----H 292
Query: 251 SYGLQPGF--DHYISIINLLGRA---GKVKDAEEFVLRLPVEPNHAI--WGALV 297
S+ ++ G D S++++ + G V D + R+ +H++ W AL+
Sbjct: 293 SWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRM---EDHSVMSWTALI 343
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 105 AISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 163
A+S M G P++ TF+ L + G+ +H ++ E D +L NSL+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 164 SMYAKCGEIDDSYRIFSNM---AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 220
S+Y+K G+ + +F M RD +SW++M+ ++GR +A+ V+ LE GL P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 221 DTVTFLGVLTACAHAGLVDKG 241
+ + V+ AC+++ V G
Sbjct: 165 NDYCYTAVIRACSNSDFVGVG 185
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 91/218 (41%), Gaps = 13/218 (5%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC-------MISGYLSAGQVFKACDLF 78
+ S+++G G + K +++ V K+ +C +IS Y G + A +F
Sbjct: 476 TFASLLSGVANVGSIRKGEQIHSQVV---KLGLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ M +R+ I+WTSMI+G+ ++ + F +M+ G P T+ + A V +
Sbjct: 533 NFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVS 592
Query: 139 QG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMG 196
+G R + M + + +V + + G + D++ + M ++ D + W + +
Sbjct: 593 EGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Query: 197 LSDHGRASEALTVYETMLEFGL-YPDTVTFLGVLTACA 233
H +LE P L + ACA
Sbjct: 653 CRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA 690
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 189/331 (57%), Gaps = 1/331 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y G+V A +FD ++ T+++ Y Q++ EA++LF +M P
Sbjct: 278 LINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TFA+L ++ ++ L QG LHG+ +K+ Y +++ N+LV+MYAK G I+D+ + FS
Sbjct: 338 EYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFS 397
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M +RD ++WN+MI G S HG EAL ++ M+ G P+ +TF+GVL AC+H G V++
Sbjct: 398 GMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQ 457
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G FN ++ + +QP HY I+ LL +AG KDAE+F+ P+E + W L+ C
Sbjct: 458 GLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNAC 517
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ + + + + + +E P ++ +V L NI+A + + +R M +GV+K P
Sbjct: 518 YVRR-NYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEP 576
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
G SWI ++ + HVF + D P + I ++
Sbjct: 577 GVSWIGIRNQTHVFLAEDNQHPEITLIYAKV 607
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 41/262 (15%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D +NS+IN YV+ + +A++LFD +P RN ++W M+ GY ++G F+ LF SM
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM- 126
Query: 83 DRDSIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
SG + NE +A V+F + + +++G+
Sbjct: 127 ---------FFSGESRPNEFVA---------------------TVVFKSCSNSGRIEEGK 156
Query: 142 QLHGMQVKTIYEYDLI----LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
Q HG +K Y LI + N+LV MY+ C ++ R+ ++ Y D ++S + G
Sbjct: 157 QFHGCFLK----YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+ G E L V + +T+L L ++ ++ ++ + MV +G
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNAE 271
Query: 258 FDHYISIINLLGRAGKVKDAEE 279
+ ++IN+ G+ GKV A+
Sbjct: 272 VEACGALINMYGKCGKVLYAQR 293
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 214/427 (50%), Gaps = 42/427 (9%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFD------------- 48
Y+ GL++ A + + D S +M+ GYV+ Q E+A L+
Sbjct: 161 YAEVGLLEEARKLFD-EMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIF 219
Query: 49 TVPI---------------------------RNKIAWTCMISGYLSAGQVFKACDLFDSM 81
TV I +++ W+ ++ Y G + +A ++FD +
Sbjct: 220 TVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI 279
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
++D ++WTSMI Y ++ E SLF E++ P TFA + A + + G+
Sbjct: 280 VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGK 339
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+HG + ++ +SLV MY KCG I+ + + D +SW S+I G + +G
Sbjct: 340 QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG 399
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+ EAL ++ +L+ G PD VTF+ VL+AC HAGLV+KG E F S+ + L DHY
Sbjct: 400 QPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY 459
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+++LL R+G+ + + + +P++P+ +W +++G C + + D+A A + L +++
Sbjct: 460 TCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCS-TYGNIDLAEEAAQELFKIE 518
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
P N +V + NIYAA + E +RK M+ GV K PG SW +K + HVF + D
Sbjct: 519 PENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSH 578
Query: 382 PHVEDIL 388
P I+
Sbjct: 579 PMYNQIV 585
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 162/315 (51%), Gaps = 14/315 (4%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N ++ Y + G L A+++FD +P R+ +W M++GY G + +A LFD M ++DS
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSY 183
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN-GTFAVLFGAMGSVAYLDQGRQLHGM 146
+WT+M++GYV+ + EA+ L+ M S N T ++ A +V + +G+++HG
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
V+ + D +L +SL+ MY KCG ID++ IF + +D +SW SMI R E
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREG 303
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY----I 262
+++ ++ P+ TF GVL ACA D E V+ Y + GFD Y
Sbjct: 304 FSLFSELVGSCERPNEYTFAGVLNACA-----DLTTEELGKQVHGYMTRVGFDPYSFASS 358
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
S++++ + G ++ A+ V P +P+ W +L+G C D A + LL+
Sbjct: 359 SLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCA-QNGQPDEALKYFDLLLKSG- 415
Query: 323 LNAPGHVALCNIYAA 337
P HV N+ +A
Sbjct: 416 -TKPDHVTFVNVLSA 429
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 99 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 158
+L+ EA+ L G P T+ L L++G+++H + + +++
Sbjct: 67 QKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVI 122
Query: 159 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
N L+ MYAKCG + D+ ++F M RD SWN M+ G ++ G EA +++ M E
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE--- 179
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKV---- 274
D+ ++ ++T ++ L++ M +P +SI A K
Sbjct: 180 -KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNI-FTVSIAVAAAAAVKCIRRG 237
Query: 275 KDAEEFVLRLPVEPNHAIWGALV---GVCG 301
K+ ++R ++ + +W +L+ G CG
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 267
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 190/322 (59%), Gaps = 9/322 (2%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+FD M +D + W SM +GYVQ EA++LF E+ P TFA + A G++A
Sbjct: 511 VFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLAS 570
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
+ G++ H +K E + + N+L+ MYAKCG +D+++ F + A RD + WNS+I
Sbjct: 571 VQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISS 630
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
++HG +AL + E M+ G+ P+ +TF+GVL+AC+HAGLV+ G + F M+ +G++P
Sbjct: 631 YANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEP 689
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
+HY+ +++LLGRAG++ A E + ++P +P +W +L+ C + ++A A +
Sbjct: 690 ETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCA-KAGNVELAEHAAEM 748
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSS 376
+ DP ++ L NIYA+ E +R+ M+++GV K PG SWI + VH+F S
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLS 808
Query: 377 GDR-------LEPHVEDILLQI 391
D+ + ++D+L+QI
Sbjct: 809 KDKSHCKANQIYEVLDDLLVQI 830
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 121/231 (52%), Gaps = 9/231 (3%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R+ T +I YL G + A +FD++P++ ++ WT+MISG V+ ++ LF ++
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
M P + + A + +L+ G+Q+H ++ E D L N L+ Y KCG +
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
++++F+ M ++ ISW +++ G + EA+ ++ +M +FGL PD +LT+C
Sbjct: 301 IAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Query: 233 AHAGLVDKGWELFNSMVNSYGLQP--GFDHYI--SIINLLGRAGKVKDAEE 279
A + F + V++Y ++ G D Y+ S+I++ + + DA +
Sbjct: 361 ASLHALG-----FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 3/176 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y+ G+V A LF+ MP+++ I+WT+++SGY QN L EA+ LF M G P
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ + + S+ L G Q+H +K D + NSL+ MYAKC + D+ ++F
Sbjct: 350 MYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
Query: 181 NMAYRDKISWNSMIMGLSDHG---RASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
A D + +N+MI G S G EAL ++ M + P +TF+ +L A A
Sbjct: 410 IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y AG + A +F+ MP+R+ ++W++M+S + + E++ +F E
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 121 NGTFAVLFGAMGSVAYLD-QGR----QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
N +L + + + LD +GR QL VK+ ++ D+ + L+ Y K G ID +
Sbjct: 145 NEY--ILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
+F + + ++W +MI G GR+ +L ++ ++E + PD VL+AC+
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL 262
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
++ G ++ ++ + YGL+ +I+ + G+V A + +P N W
Sbjct: 263 PFLEGGKQI-HAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNIISWTT 320
Query: 296 LV 297
L+
Sbjct: 321 LL 322
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
FA L S L +HG + E D L N L+++Y++ G + + ++F M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY----PDTVTFLGVLTACAHAGLVD 239
R+ +SW++M+ + HG E+L V+ LEF P+ + AC +GL
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVF---LEFWRTRKDSPNEYILSSFIQAC--SGLDG 161
Query: 240 KG-WELFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
+G W +F + S+ ++ GFD + + I+ + G + A LP E + W
Sbjct: 162 RGRWMVFQ--LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWT 218
Query: 295 ALVGVC 300
++ C
Sbjct: 219 TMISGC 224
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----D 83
N++++ Y + G E A + FD+ R+ + W +IS Y + G+ KA + + M +
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
+ I + ++S L+ + + F M+ G P + + +G L++ R+L
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKAREL 713
Query: 144 -HGMQVKTIYEYDLILENSLVSMYAKCGEID 173
M K I+ SL+S AK G ++
Sbjct: 714 IEKMPTKPA----AIVWRSLLSGCAKAGNVE 740
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 2/168 (1%)
Query: 35 VQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMIS 94
VQ GQ Q L + I ++ Y G A FDS RD + W S+IS
Sbjct: 571 VQLGQEFHCQLLKRGLECNPYIT-NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 95 GYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY 154
Y + +A+ + +MM+ G P TF + A ++ G + + ++ E
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEP 689
Query: 155 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRD-KISWNSMIMGLSDHG 201
+ +VS+ + G ++ + + M + I W S++ G + G
Sbjct: 690 ETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 737
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 188/344 (54%), Gaps = 8/344 (2%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N++++G V++G L A++LFD +P R+ I++T MI GY G + A DLF+ D
Sbjct: 209 SWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVD 268
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ--- 142
AW+++I GY QN EA +F EM A P L A + + +
Sbjct: 269 VRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDS 328
Query: 143 -LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
LH K Y + +L+ M AKCG +D + ++F M RD +S+ SM+ G++ HG
Sbjct: 329 YLHQRMNKFSSHY---VVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHG 385
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
SEA+ ++E M++ G+ PD V F +L C + LV++G F M Y + DHY
Sbjct: 386 CGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHY 445
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
I+NLL R GK+K+A E + +P E + + WG+L+G C L + ++A + L EL+
Sbjct: 446 SCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSL-HGNTEIAEVVARHLFELE 504
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
P +A +V L NIYAA DR ++ LR +M G+ K G SWI
Sbjct: 505 PQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 120/263 (45%), Gaps = 49/263 (18%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
S ++ Y + L A+++F +P RN ++WT ++ Y+ +G++ +A +FD MP+R+
Sbjct: 149 TSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLG 208
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +++ G V++ + A LF EM
Sbjct: 209 SWNALVDGLVKSGDLVNAKKLFDEMPKR-------------------------------- 236
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
D+I S++ YAK G++ + +F D +W+++I+G + +G+ +EA
Sbjct: 237 -------DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAF 289
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAG---LVDKGWELFNSMVNSYGLQPGFDHYI-- 262
V+ M + PD +G+++AC+ G L +K + +N + HY+
Sbjct: 290 KVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-----SHYVVP 344
Query: 263 SIINLLGRAGKVKDAEEFVLRLP 285
++I++ + G + A + +P
Sbjct: 345 ALIDMNAKCGHMDRAAKLFEEMP 367
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVA 135
+F+ +P + W +I GY L E +S+ MM G + P TF ++ +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+ G +HG+ ++ ++ D+++ S V Y KC ++ + ++F M R+ +SW ++++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 196 GLSDHGRASEALTVYETMLEFGL 218
G EA ++++ M E L
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNL 207
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 191/327 (58%), Gaps = 1/327 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y ++ A LF + ++ ++W ++I GY +A S+F E + + S
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVT 448
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TF+ GA S+A +D G Q+HG+ +KT + + NSL+ MYAKCG+I + +F+
Sbjct: 449 EVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFN 508
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M D SWN++I G S HG +AL + + M + P+ +TFLGVL+ C++AGL+D+
Sbjct: 509 EMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQ 568
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G E F SM+ +G++P +HY ++ LLGR+G++ A + + +P EP+ IW A++
Sbjct: 569 GQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA- 627
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+++ + + A R+ + +L+++P + +V + N+YA + + S+RK M+ GV+K P
Sbjct: 628 SMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEP 687
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDI 387
G SWI +G VH FS G P ++ I
Sbjct: 688 GLSWIEHQGDVHYFSVGLSDHPDMKLI 714
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 152/337 (45%), Gaps = 46/337 (13%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQEL--------------- 46
YSV G +D A EG L D +++ YV+ G E + +L
Sbjct: 191 YSVCGSVDSARTVFEGILCK-DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYT 249
Query: 47 FDTV--------------PIRNKIAWTC----------MISGYLSAGQVFKACDLFDSMP 82
FDT + +I TC ++ Y G + A +F+ MP
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG--AMGSVAYLDQG 140
D + W+ MI+ + QN EA+ LF M P T + + A+G + L G
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL--G 367
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
QLHG+ VK ++ D+ + N+L+ +YAKC ++D + ++F+ ++ ++++SWN++I+G +
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G +A +++ L + VTF L ACA +D G ++ + + +
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK-VAV 486
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
S+I++ + G +K A+ + + A W AL+
Sbjct: 487 SNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALI 522
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 10/248 (4%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N +I+ Y G V A +F+ + +D + W ++S YV+N +++ L M
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
GF P N TF A + D + +HG +KT Y D + L+ +Y + G++
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMS 299
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
D++++F+ M D + W+ MI +G +EA+ ++ M E + P+ T +L CA
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDH--YIS--IINLLGRAGKVKDAEEFVLRLPVEPN 289
G +L +V + GFD Y+S +I++ + K+ A + L N
Sbjct: 360 IGKCSGLGEQLHGLVV-----KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKN 413
Query: 290 HAIWGALV 297
W ++
Sbjct: 414 EVSWNTVI 421
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 99/226 (43%), Gaps = 7/226 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y+ AG A +LFD MP+R+++++ ++ GY + I L+ + G
Sbjct: 90 LLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELN 145
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
F S+ + LH VK Y+ + + +L++ Y+ CG +D + +F
Sbjct: 146 PHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFE 205
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ +D + W ++ ++G ++L + M G P+ TF L A G D
Sbjct: 206 GILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDF 265
Query: 241 GWELFNSMVNS-YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+ ++ + Y L P + ++ L + G + DA + +P
Sbjct: 266 AKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP 309
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS- 86
NS+I+ Y + G ++ AQ +F+ + + +W +ISGY + G +A + D M DRD
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 87 ---IAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+ + ++SG LI + F M+ HG P + + +G LD+ +
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMK 607
Query: 143 L 143
L
Sbjct: 608 L 608
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 197/362 (54%), Gaps = 3/362 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNK-IAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
N++++ Y + G +E A ++F + R +++ ++SGY+++G A LF M D
Sbjct: 474 NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDL 533
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
W+ M+ Y ++ EAI +F E+ A G P T L +A L RQ HG
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY 593
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
++ D+ L+ +L+ +YAKCG + +Y +F + A RD + + +M+ G + HGR EA
Sbjct: 594 IIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEA 652
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
L +Y M E + PD V +LTAC HAGL+ G ++++S+ +G++P + Y ++
Sbjct: 653 LMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVD 712
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAP 326
L+ R G++ DA FV ++PVEPN IWG L+ C + D+ LL+ + +
Sbjct: 713 LIARGGRLDDAYSFVTQMPVEPNANIWGTLLRAC-TTYNRMDLGHSVANHLLQAESDDTG 771
Query: 327 GHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVED 386
HV + N+YAA+ + + LR M+ K ++K GCSW+ V G+ +VF SGD P +
Sbjct: 772 NHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDS 831
Query: 387 IL 388
I
Sbjct: 832 IF 833
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 113/213 (53%), Gaps = 13/213 (6%)
Query: 53 RNKIAWTCMISGYLSAGQVFK-ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
++ + ++S Y G +F A FD + D+D ++W ++I+G+ +N ++A+A F
Sbjct: 155 KDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCL 214
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQ------GRQLHGMQVKTIY-EYDLILENSLVS 164
M+ P +A + + A +D+ GRQ+H V+ + + + + NSLVS
Sbjct: 215 MLKE---PTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVS 271
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTV 223
Y + G I+++ +F+ M +D +SWN +I G + + +A ++ ++ G + PD+V
Sbjct: 272 FYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSV 331
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMV-NSYGLQ 255
T + +L CA + G E+ + ++ +SY L+
Sbjct: 332 TIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 7/202 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSP 119
++S YL G++ +A LF M +D ++W +I+GY N +A LF ++ G SP
Sbjct: 269 LVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSP 328
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRI 178
+ T + + L G+++H ++ Y D + N+L+S YA+ G+ +Y
Sbjct: 329 DSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWA 388
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
FS M+ +D ISWN+++ +D + + L + +L + D+VT L +L C + +
Sbjct: 389 FSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI 448
Query: 239 DKGWELFNSMVNSYGLQPGFDH 260
K E V+ Y ++ G H
Sbjct: 449 GKVKE-----VHGYSVKAGLLH 465
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 12/216 (5%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGFSPLNGTFAVLFGAMGSVA 135
+F M D + W +++G + E + F M A P + TFA++ +
Sbjct: 78 MFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI-DDSYRIFSNMAYRDKISWNSMI 194
G+ +H +K E D ++ N+LVSMYAK G I D+Y F +A +D +SWN++I
Sbjct: 137 DSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK------GWELFNSM 248
G S++ ++A + ML+ P+ T VL CA +DK G ++ + +
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS---MDKNIACRSGRQIHSYV 253
Query: 249 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
V LQ S+++ R G++++A R+
Sbjct: 254 VQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 106/240 (44%), Gaps = 44/240 (18%)
Query: 116 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
GF + F + A SV+ L GR LHG K + + S+++MYAKC +DD
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 176 YRIFSNMAYRDKISWNSMIMGLS-DHGRASEALTVYETMLEFG--LYPDTVTFLGVLTAC 232
++F M D + WN ++ GLS GR E + ++ M F P +VTF VL C
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAM-HFADEPKPSSVTFAIVLPLC 132
Query: 233 A-----------HAGLVDKGWE----LFNSMVNSYGLQPGF---DHYI------------ 262
H+ ++ G E + N++V+ Y + GF D Y
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYA-KFGFIFPDAYTAFDGIADKDVVS 191
Query: 263 --SIINLLGRAGKVKDA-EEFVLRL--PVEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
+II + DA F L L P EPN+A ++ VC + D ++A R+ +++
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC--ASMDKNIACRSGRQI 249
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 184/341 (53%), Gaps = 5/341 (1%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
+N T +++ Y G++ KA +FDSM ++D + W++MI GY N E I LF +M
Sbjct: 245 KNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM 304
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY--DLILENSLVSMYAKCG 170
+ P + + S+ LD G G+ + +E+ +L + N+L+ MYAKCG
Sbjct: 305 LQENLKPDQFSIVGFLSSCASLGALDLGEW--GISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
+ + +F M +D + N+ I GL+ +G + V+ + G+ PD TFLG+L
Sbjct: 363 AMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLC 422
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 290
C HAGL+ G FN++ Y L+ +HY +++L GRAG + DA + +P+ PN
Sbjct: 423 GCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNA 482
Query: 291 AIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKE 350
+WGAL+ C L K D +A K L+ L+P NA +V L NIY+ R E +R
Sbjct: 483 IVWGALLSGCRLVK-DTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDM 541
Query: 351 MRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
M KG++K PG SWI ++G+VH F + D+ P + I ++
Sbjct: 542 MNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKL 582
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 101/185 (54%)
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
A T ++S Y +G++ A LFD +PDR + WT++ SGY + EAI LF +M+ G
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMG 207
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
P + + A V LD G + + + + + +LV++YAKCG+++ +
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+F +M +D ++W++MI G + + E + ++ ML+ L PD + +G L++CA G
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 237 LVDKG 241
+D G
Sbjct: 328 ALDLG 332
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 2/221 (0%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LF + + S+I+G+V N L E + LF + HG TF ++ A +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
G LH + VK + +D+ SL+S+Y+ G ++D++++F + R ++W ++ G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ GR EA+ +++ M+E G+ PD+ + VL+AC H G +D G E + +Q
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG-EWIVKYMEEMEMQK 245
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+++NL + GK++ A V VE + W ++
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARS-VFDSMVEKDIVTWSTMI 285
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+Q+H + +D L N L+ + SY +FS+ + + +NS+I G ++
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
E L ++ ++ + GLY TF VL AC A G +L +S ++ GF+H
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL-----HSLVVKCGFNH 144
Query: 261 YI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
+ S++++ +G++ DA + +P + + W AL
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIP-DRSVVTWTAL 183
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 192/340 (56%), Gaps = 2/340 (0%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R+ T ++ Y+ G+V +A +F + D+D +AW++M++GY Q AI +FGE+
Sbjct: 426 RSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL 485
Query: 113 MAHGFSPLNGTFAVLFGAMGSV-AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
G P TF+ + + A + QG+Q HG +K+ + L + ++L++MYAK G
Sbjct: 486 TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGN 545
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
I+ + +F +D +SWNSMI G + HG+A +AL V++ M + + D VTF+GV A
Sbjct: 546 IESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 605
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
C HAGLV++G + F+ MV + P +H +++L RAG+++ A + + +P
Sbjct: 606 CTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGST 665
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
IW ++ C + K ++ A ++++ + P ++ +V L N+YA + E +RK M
Sbjct: 666 IWRTILAACRVHK-KTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLM 724
Query: 352 RIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
+ V+K PG SWI VK + + F +GDR P + I +++
Sbjct: 725 NERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKL 764
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 122/250 (48%), Gaps = 8/250 (3%)
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
++WT+MISG++QN+ EA+ LF EM G P T++V+ A+ ++ ++H
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHAQ 418
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
VKT YE + +L+ Y K G+++++ ++FS + +D ++W++M+ G + G A
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+ ++ + + G+ P+ TF +L CA + F+ L +++
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV---GVCGLSKTDADVASRATKRLLELDPL 323
+ + G ++ AEE V + E + W +++ G + DV KR +++D +
Sbjct: 539 MYAKKGNIESAEE-VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGV 597
Query: 324 NAPGHVALCN 333
G A C
Sbjct: 598 TFIGVFAACT 607
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ +FD M +R+ + WT++ISGY +N + E ++LF M G
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + TFA G + +G Q+H + VK + + + NSL+++Y KCG + + +
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
F + ++WNSMI G + +G EAL ++ +M + +F V+ CA+
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 64 GYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 123
G +S+ +++ A +LFD P RD ++ S++ G+ ++ EA LF + G
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
F+ + ++ GRQLH +K + D+ + SLV Y K D ++F M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
R+ ++W ++I G + + E LT++ M G P++ TF L A G+ +G +
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
+ +V + GL S+INL + G V+ A
Sbjct: 216 VHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKAR 249
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 49 TVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISL 108
T+P+ N +I+ YL G V KA LFD + + W SMISGY N L EA+ +
Sbjct: 228 TIPVSNS-----LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 109 FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK 168
F M + +FA + ++ L QLH VK + +D + +L+ Y+K
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 169 CGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
C + D+ R+F + + +SW +MI G + EA+ ++ M G+ P+ T+
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 228 VLTAC-------AHAGLVDKGWE 243
+LTA HA +V +E
Sbjct: 403 ILTALPVISPSEVHAQVVKTNYE 425
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 34/157 (21%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
++++ Y + G +E A+E+F ++ ++W MISGY GQ KA D+F M R
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK-- 591
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHGM 146
++G TF +F A +++G + +
Sbjct: 592 ------------------------------VKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Query: 147 QVKTIYEYDLILENS-LVSMYAKCGEIDDSYRIFSNM 182
V+ NS +V +Y++ G+++ + ++ NM
Sbjct: 622 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 221 bits (562), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 179/327 (54%), Gaps = 9/327 (2%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +F+S + D ++ T ++ G QN EAI F M+ G
Sbjct: 301 YSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVV 360
Query: 125 AVLFGAMGSVAYLDQ----GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ + G V+++D G+QLH + +K + + + N L++MY+KCG++ DS +F
Sbjct: 361 SAVLG----VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFR 416
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M R+ +SWNSMI + HG AL +YE M + P VTFL +L AC+H GL+DK
Sbjct: 417 RMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDK 476
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G EL N M +G++P +HY II++LGRAG +K+A+ F+ LP++P+ IW AL+G C
Sbjct: 477 GRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGAC 536
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
D +V A ++L + P ++ H+ + NIY++ + E K M+ GV K
Sbjct: 537 SF-HGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKET 595
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDI 387
G S I ++ + H F D+L P E I
Sbjct: 596 GISSIEIEHKTHSFVVEDKLHPQAEAI 622
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 124/242 (51%), Gaps = 10/242 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y G +FD M R+ I T++ISG ++NEL + + LF M P
Sbjct: 196 LITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPN 255
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ T+ A + +G+Q+H + K E +L +E++L+ MY+KCG I+D++ IF
Sbjct: 256 SVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE 315
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ D++S +++GL+ +G EA+ + ML+ G+ D V++A +D
Sbjct: 316 STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA----NVVSAVLGVSFIDN 371
Query: 241 GWELFNSMVNSYGLQPGF--DHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
L ++S ++ F + +++ +IN+ + G + D++ R+P + N+ W ++
Sbjct: 372 SLGL-GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSM 429
Query: 297 VG 298
+
Sbjct: 430 IA 431
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 121/241 (50%), Gaps = 8/241 (3%)
Query: 42 KAQELFDTVPI---RNK-IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYV 97
K E F+ V RN + W ++S Y G++ A LFD MP RD I+ + G++
Sbjct: 73 KNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFL 132
Query: 98 QNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL 156
+N L M+ G F + T ++ + + + +H + + + Y+ ++
Sbjct: 133 RNRETESGFVLLKRMLGSGGFD--HATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEI 190
Query: 157 ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF 216
+ N L++ Y KCG +F M++R+ I+ ++I GL ++ + L ++ M
Sbjct: 191 SVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRG 250
Query: 217 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 276
++P++VT+L L AC+ + + +G ++ ++++ YG++ +++++ + G ++D
Sbjct: 251 LVHPNSVTYLSALAACSGSQRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIED 309
Query: 277 A 277
A
Sbjct: 310 A 310
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 221 bits (562), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 192/328 (58%), Gaps = 2/328 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDR-DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
+++ Y ++ +LF+ + DS++W ++++ +Q+E E + LF M+ P
Sbjct: 412 LLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEP 471
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ T L ++ L G Q+H +KT + ++N L+ MYAKCG + + RIF
Sbjct: 472 DHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIF 531
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+M RD +SW+++I+G + G EAL +++ M G+ P+ VTF+GVLTAC+H GLV+
Sbjct: 532 DSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVE 591
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+G +L+ +M +G+ P +H +++LL RAG++ +AE F+ + +EP+ +W L+
Sbjct: 592 EGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C ++ + +A +A + +L++DP N+ HV LC+++A++ LR M+ V+K
Sbjct: 652 CK-TQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKI 710
Query: 360 PGCSWILVKGRVHVFSSGDRLEPHVEDI 387
PG SWI ++ ++H+F + D P +DI
Sbjct: 711 PGQSWIEIEDKIHIFFAEDIFHPERDDI 738
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 123/239 (51%), Gaps = 3/239 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S Y G + A ++FD MP+R+ +++TS+I+GY QN AEAI L+ +M+ P
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
F + A S + + G+QLH +K LI +N+L++MY + ++ D+ R+F
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY-PDTVTFLGVLTACAHAGLVD 239
+ +D ISW+S+I G S G EAL+ + ML FG++ P+ F L AC+ D
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G ++ + S L S+ ++ R G + A ++ P+ A W ++
Sbjct: 288 YGSQIHGLCIKS-ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVIIA 344
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 6/214 (2%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 115
IA +I+ Y+ Q+ A +F +P +D I+W+S+I+G+ Q EA+S EM++
Sbjct: 204 IAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSF 263
Query: 116 G-FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
G F P F A S+ D G Q+HG+ +K+ + I SL MYA+CG ++
Sbjct: 264 GVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNS 323
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
+ R+F + D SWN +I GL+++G A EA++V+ M G PD ++ +L A
Sbjct: 324 ARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTK 383
Query: 235 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
+ +G + ++SY ++ GF +++ N L
Sbjct: 384 PMALSQGMQ-----IHSYIIKWGFLADLTVCNSL 412
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 10/231 (4%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N IA + Y G + A +FD + D+ +W +I+G N EA+S+F +M
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
+ GF P + L A L QG Q+H +K + DL + NSL++MY C ++
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 174 DSYRIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+ +F + D +SWN+++ H + E L +++ ML PD +T +L C
Sbjct: 424 CCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGF--DHYIS--IINLLGRAGKVKDAEE 279
+ G S V+ Y L+ G + +I +I++ + G + A
Sbjct: 484 VEISSLKLG-----SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARR 529
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 21/225 (9%)
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGE-------MMAHGFSPLNGTFAV------ 126
S+ + +A +S++S EL+ + I+ + + A F+ N +F +
Sbjct: 12 SVSNSQILATSSVVSTIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI 71
Query: 127 -LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 185
L A S L QGR++H + + +YD IL N ++SMY KCG + D+ +F M R
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 186 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 245
+ +S+ S+I G S +G+ +EA+ +Y ML+ L PD F ++ ACA + V G +L
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 246 NSMVNSYGLQPGFDHYI---SIINLLGRAGKVKDAEEFVLRLPVE 287
++ L+ H I ++I + R ++ DA +P++
Sbjct: 192 AQVIK---LESS-SHLIAQNALIAMYVRFNQMSDASRVFYGIPMK 232
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 82/201 (40%), Gaps = 33/201 (16%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N +I+ Y + G L +A+ +FD++ R+ ++W+ +I GY +G
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG------------------ 553
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG-M 146
EA+ LF EM + G P + TF + A V +++G +L+ M
Sbjct: 554 -------------FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATM 600
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDHGRASE 205
Q + + +V + A+ G ++++ R M D + W +++ G
Sbjct: 601 QTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHL 660
Query: 206 ALTVYETMLEFGLYPDTVTFL 226
A E +L+ + T L
Sbjct: 661 AQKAAENILKIDPFNSTAHVL 681
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 210/370 (56%), Gaps = 9/370 (2%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N++I+ Y + G+++ A+ LF + + +W +I+ ++ AG++ +A LF + + +
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 86 SIA--------WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
+ WTS+I G +++ F +M + T + + L
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPAL 450
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
+ GR++HG ++T +++++N+LV+MYAKCG + + +F + +D ISWNS+I G
Sbjct: 451 NLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGY 510
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
HG A +AL++++ M+ G +PD + + VL+AC+HAGLV+KG E+F SM +GL+P
Sbjct: 511 GMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
+HY I++LLGR G +K+A E V +P+EP + GAL+ C + K + D+A +L
Sbjct: 571 QEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHK-NVDIAEGIASQL 629
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG 377
L+P ++ L NIY+A R E ++R + K ++K G SWI VK + + FSSG
Sbjct: 630 SVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSG 689
Query: 378 DRLEPHVEDI 387
++ E I
Sbjct: 690 SIVQSEFETI 699
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 132/293 (45%), Gaps = 21/293 (7%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR-- 84
+N ++ Y +AG++ A LF +P+RN+++W MI G+ A +F+ M
Sbjct: 196 VNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEF 255
Query: 85 --DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
D + WTS++S + Q + + F M G + AV F + L +
Sbjct: 256 KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEK 315
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+HG +K +E L N+L+ +Y K G++ D+ +F + + SWNS+I D G+
Sbjct: 316 VHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGK 375
Query: 203 ASEALTVYETMLEF----GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
EAL+++ + E + + VT+ V+ C G D E F M S L
Sbjct: 376 LDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA--- 432
Query: 259 DHYISIINLLGRAGKV------KDAEEFVLRLPVEPNHAIWGALVGV---CGL 302
+ ++I +L ++ ++ V+R + N + ALV + CGL
Sbjct: 433 -NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGL 484
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 154/364 (42%), Gaps = 57/364 (15%)
Query: 18 NLNNFDDQSL----NSMINGYVQAGQLEK--AQELFDTVPIRNKIAWTCMISGYLSAGQV 71
+L + +DQSL + ++ + A Q + AQ L R+ +IS Y G +
Sbjct: 46 SLTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLL 105
Query: 72 FKACDLFDSMPD---RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
A ++F+++ D W S++ V + L A+ L+ M G + ++
Sbjct: 106 LDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLIL 165
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
A + R H ++ + +L + N L+++Y K G + D+Y +F M R+++
Sbjct: 166 RACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRM 225
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
SWN MI G S A+ ++E M PD VT+ VL+ + G + + F+ M
Sbjct: 226 SWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Query: 249 ------------------------------VNSYGLQPGFDHYI----SIINLLGRAGKV 274
V+ Y ++ GF+ Y+ ++I++ G+ GKV
Sbjct: 286 RMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKV 345
Query: 275 KDAEEFVLRLPVEPNHAI--WGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALC 332
KDAE ++ N I W +L+ S DA A EL+ +N HV C
Sbjct: 346 KDAEHLFRQI---RNKGIESWNSLI----TSFVDAGKLDEALSLFSELEEMN---HV--C 393
Query: 333 NIYA 336
N+ A
Sbjct: 394 NVKA 397
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 186/328 (56%), Gaps = 2/328 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G++ A ++F+ + RD ++W SMI+ Q++ + AI +F +M G
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYD 541
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ + A ++ G+ +HG +K D+ E++L+ MYAKCG + + +F
Sbjct: 542 CVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFK 601
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE-FGLYPDTVTFLGVLTACAHAGLVD 239
M ++ +SWNS+I +HG+ ++L ++ M+E G+ PD +TFL ++++C H G VD
Sbjct: 602 TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVD 661
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+G F SM YG+QP +HY +++L GRAG++ +A E V +P P+ +WG L+G
Sbjct: 662 EGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA 721
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C L K + ++A A+ +L++LDP N+ +V + N +A +T +R M+ + V+K
Sbjct: 722 CRLHK-NVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKI 780
Query: 360 PGCSWILVKGRVHVFSSGDRLEPHVEDI 387
PG SWI + R H+F SGD P I
Sbjct: 781 PGYSWIEINKRTHLFVSGDVNHPESSHI 808
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 151/340 (44%), Gaps = 42/340 (12%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----------DTV 50
MYS G D AS ++ D + N MI+GYVQ+G +E++ F D +
Sbjct: 283 MYSKCGRFDDASKLFR-MMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAI 341
Query: 51 P------------------------IRNKIAW-----TCMISGYLSAGQVFKACDLFDSM 81
+R+ I+ + +I Y V A ++F
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC 401
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
D + +T+MISGY+ N L +++ +F ++ SP T + +G + L GR
Sbjct: 402 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 461
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+LHG +K ++ + +++ MYAKCG ++ +Y IF ++ RD +SWNSMI +
Sbjct: 462 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
S A+ ++ M G+ D V+ L+ACA+ G + M+ + L
Sbjct: 522 NPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSE 580
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
++I++ + G +K A V + E N W +++ CG
Sbjct: 581 STLIDMYAKCGNLKAAMN-VFKTMKEKNIVSWNSIIAACG 619
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N+ + +I YL G++ LFD + +D + W M++GY + + I F M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
SP TF + S +D G QLHG+ V + +++ ++NSL+SMY+KCG D
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
D+ ++F M+ D ++WN MI G G E+LT + M+ G+ PD +TF +L +
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 122/247 (49%), Gaps = 10/247 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S Y G+ A LF M D++ W MISGYVQ+ L+ E+++ F EM++ G P
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TF+ L ++ L+ +Q+H ++ D+ L ++L+ Y KC + + IFS
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
D + + +MI G +G ++L ++ +++ + P+ +T + +L +
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Query: 241 GWELFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
G EL + + ++ GFD+ +I I++ + G++ A E RL + + W ++
Sbjct: 460 GREL-----HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSM 513
Query: 297 VGVCGLS 303
+ C S
Sbjct: 514 ITRCAQS 520
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 18/244 (7%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSI-AWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
M + G++F DL R SI W S+IS +V+N L+ +A++ + +M+ G SP
Sbjct: 82 MCGSFSDCGKMFYRLDL-----RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSP 136
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI-YEYDLILENSLVSMYAKCGEIDDSYRI 178
TF L A ++ +G V ++ + + + +SL+ Y + G+ID ++
Sbjct: 137 DVSTFPCLVKACVALKNF-KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKL 195
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + +D + WN M+ G + G + + M + P+ VTF VL+ CA L+
Sbjct: 196 FDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLI 255
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWG 294
D G +L +V S G D SI N L + G+ DA + + R+ + W
Sbjct: 256 DLGVQLHGLVVVS-----GVDFEGSIKNSLLSMYSKCGRFDDASK-LFRMMSRADTVTWN 309
Query: 295 ALVG 298
++
Sbjct: 310 CMIS 313
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
++L A + L QG+Q+H + D + ++ MYA CG D ++F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 184 YRDKI--SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
R WNS+I +G ++AL Y ML FG+ PD TF ++ AC A KG
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV-ALKNFKG 156
Query: 242 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVC 300
+ + V+S G+ S+I GK+ + R+ ++ + IW ++ G
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV-LQKDCVIWNVMLNGYA 215
Query: 301 GLSKTDADVASRATKRLLELDP 322
D+ + + R+ ++ P
Sbjct: 216 KCGALDSVIKGFSVMRMDQISP 237
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 185/312 (59%), Gaps = 4/312 (1%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + + ++ Y G V +A +F+ M ++S++W++++ GY QN +AI +F EM
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME 358
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
F + A +A + G+++HG V+ ++I+E++L+ +Y K G ID
Sbjct: 359 EKDLY----CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCID 414
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+ R++S M+ R+ I+WN+M+ L+ +GR EA++ + M++ G+ PD ++F+ +LTAC
Sbjct: 415 SASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACG 474
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
H G+VD+G F M SYG++PG +HY +I+LLGRAG ++AE + R + ++W
Sbjct: 475 HTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLW 534
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
G L+G C + + VA R KR++EL+P +V L N+Y A RH + ++RK M
Sbjct: 535 GVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVR 594
Query: 354 KGVRKAPGCSWI 365
+GV K G SWI
Sbjct: 595 RGVAKTVGQSWI 606
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 144/284 (50%), Gaps = 19/284 (6%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLS-----AGQVFKACDL 77
++ +L+S + + G++ + F V I + W IS L+ + A +
Sbjct: 162 NEFTLSSAVKACSELGEV-RLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRV 220
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGFSPLNGTFAVLFGAMGSVAY 136
FD MP+ D I WT+++S + +N+L EA+ LF M G P TF + A G++
Sbjct: 221 FDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRR 280
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L QG+++HG + ++++E+SL+ MY KCG + ++ ++F+ M+ ++ +SW++++ G
Sbjct: 281 LKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGG 340
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+G +A+ ++ M E LY F VL ACA V G E+ V +
Sbjct: 341 YCQNGEHEKAIEIFREMEEKDLY----CFGTVLKACAGLAAVRLGKEIHGQYVR----RG 392
Query: 257 GFDHYI---SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
F + I ++I+L G++G + A ++ + N W A++
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAML 435
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 3/223 (1%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+FD +D+I+WTSM+SGYV + +A+ +F EM++ G T + A +
Sbjct: 119 VFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGE 178
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
+ GR HG+ + +E++ + ++L +Y E D+ R+F M D I W +++
Sbjct: 179 VRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSA 238
Query: 197 LSDHGRASEALTVYETMLE-FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
S + EAL ++ M GL PD TF VLTAC + + +G E+ ++ + G+
Sbjct: 239 FSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN-GIG 297
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
S++++ G+ G V++A + V + N W AL+G
Sbjct: 298 SNVVVESSLLDMYGKCGSVREARQ-VFNGMSKKNSVSWSALLG 339
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 102 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS 161
+ EAI + + +A L V G Q H VK+ E D + NS
Sbjct: 42 LTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNS 101
Query: 162 LVSMYAKCGE-IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 220
L+S+Y K G + ++ R+F +D ISW SM+ G +AL V+ M+ FGL
Sbjct: 102 LLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDA 161
Query: 221 DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAE 278
+ T + AC+ G V G F+ +V ++G + ++H+IS + L G + DA
Sbjct: 162 NEFTLSSAVKACSELGEVRLG-RCFHGVVITHGFE--WNHFISSTLAYLYGVNREPVDAR 218
Query: 279 EFVLRLPVEPNHAIWGALVGVCGLSKTD 306
+P EP+ W A++ SK D
Sbjct: 219 RVFDEMP-EPDVICWTAVLS--AFSKND 243
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 211/382 (55%), Gaps = 23/382 (6%)
Query: 5 FGLMDYASNAL---EGNLNN-------FDDQS------LNSMINGYVQAGQLEKAQELFD 48
F L +Y NAL N + FDD + +SM +GY + G++++A LFD
Sbjct: 143 FVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFD 202
Query: 49 TVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISL 108
+P ++++AW MI+G L ++ A +LFD ++D + W +MISGYV EA+ +
Sbjct: 203 EMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGI 262
Query: 109 FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLI-----LENSLV 163
F EM G P T L A + L+ G++LH ++T I + N+L+
Sbjct: 263 FKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALI 322
Query: 164 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 223
MYAKCG ID + +F + RD +WN++I+GL+ H A ++ ++E M ++P+ V
Sbjct: 323 DMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEV 381
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR 283
TF+GV+ AC+H+G VD+G + F+ M + Y ++P HY ++++LGRAG++++A FV
Sbjct: 382 TFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVES 441
Query: 284 LPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE 343
+ +EPN +W L+G C + + ++ A ++LL + + +V L NIYA+ +
Sbjct: 442 MKIEPNAIVWRTLLGACKIY-GNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDG 500
Query: 344 LTSLRKEMRIKGVRKAPGCSWI 365
+ +RK V+K G S I
Sbjct: 501 VQKVRKMFDDTRVKKPTGVSLI 522
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 119/295 (40%), Gaps = 67/295 (22%)
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
G + A LFD +P D ++ G Q+ + +SL+ EM G SP TF +
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE----------------- 171
A + + G HG V+ + + ++N+L+ +A CG+
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 172 --------------IDDSYRIFSNMAYRDK------------------------------ 187
ID++ R+F M Y+D+
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 188 -ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL-- 244
++WN+MI G + G EAL +++ M + G +PD VT L +L+ACA G ++ G L
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 299
Query: 245 --FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ S + G + ++I++ + G + A E V R + + + W L+
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIE-VFRGVKDRDLSTWNTLI 353
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 213/407 (52%), Gaps = 44/407 (10%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRN---------KIAWTCMISG--------- 64
D S N+MI+GY + G ++A ELF + N + C SG
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 65 ---------------------YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA 103
Y G++ AC LF+ +P +D I+W ++I GY L
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH---GMQVKTIYEYDLILEN 160
EA+ LF EM+ G +P + T + A + +D GR +H ++K + L
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS-SLRT 408
Query: 161 SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 220
SL+ MYAKCG+I+ ++++F+++ ++ SWN+MI G + HGRA + ++ M + G+ P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 221 DTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
D +TF+G+L+AC+H+G++D G +F +M Y + P +HY +I+LLG +G K+AEE
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEM 528
Query: 281 VLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDR 340
+ + +EP+ IW +L+ C + + ++ + L++++P N +V L NIYA+ R
Sbjct: 529 INMMEMEPDGVIWCSLLKACKM-HGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 587
Query: 341 HIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
E+ R + KG++K PGCS I + VH F GD+ P +I
Sbjct: 588 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 634
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 181/347 (52%), Gaps = 20/347 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
S+I+ YVQ G+LE A ++FD P R+ +++T +I GY S G + A LFD +P +D +
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +MISGY + EA+ LF +MM P T + A ++ GRQ+H
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ +L + N+L+ +Y+KCGE++ + +F + Y+D ISWN++I G + EAL
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-W------ELFNSMVNSYGLQPGFDH 260
+++ ML G P+ VT L +L ACAH G +D G W + + N+ L+
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR----- 407
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCGLSKTDA--DVASRATKRL 317
S+I++ + G ++ A + V + + + W A++ G + DA D+ SR K
Sbjct: 408 -TSLIDMYAKCGDIEAAHQ-VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 318 LELDPLNAPGHVALCNIYAAND--RHIELTSLRKEMRIKGVRKAPGC 362
++ D + G ++ C+ D RHI ++ ++ ++ + GC
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHI-FRTMTQDYKMTPKLEHYGC 511
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 132/276 (47%), Gaps = 35/276 (12%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
+K+ C++S + + A +F ++ + + + W +M G+ + A+ L+ M+
Sbjct: 69 SKLIEFCILSPHFEG--LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMI 126
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
+ G P + TF + + +G+Q+HG +K + DL + SL+SMY + G ++
Sbjct: 127 SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLE 186
Query: 174 DSYRIFSNMAYR-------------------------------DKISWNSMIMGLSDHGR 202
D++++F +R D +SWN+MI G ++ G
Sbjct: 187 DAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN 246
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
EAL +++ M++ + PD T + V++ACA +G ++ G ++ + ++ +G
Sbjct: 247 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV-HLWIDDHGFGSNLKIVN 305
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++I+L + G+++ A RLP + + W L+G
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYK-DVISWNTLIG 340
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 187/336 (55%), Gaps = 2/336 (0%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R+ + ++S Y+ G++ LFD+M D+ ++W ++I+GY+QN A+ +F +M
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ +G + +FGA + L GR+ H +K + E D + SL+ MYAK G I
Sbjct: 589 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 648
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
S ++F+ + + SWN+MIMG HG A EA+ ++E M G PD +TFLGVLTAC
Sbjct: 649 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 708
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL-RLPVEPNHA 291
H+GL+ +G + M +S+GL+P HY +I++LGRAG++ A V + E +
Sbjct: 709 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 768
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
IW +L+ C + + + ++ + +L EL+P +V L N+YA + ++ +R+ M
Sbjct: 769 IWKSLLSSCRIHQ-NLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRM 827
Query: 352 RIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+RK GCSWI + +V F G+R E+I
Sbjct: 828 NEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEI 863
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH----G 116
++S Y + G V A LFD MP+R+ ++W SMI + N E+ L GEMM
Sbjct: 228 LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
F P T + + G+ +HG VK + +L+L N+L+ MY+KCG I ++
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG--LYPDTVTFLGVLTACAH 234
IF ++ +SWN+M+ G S G V ML G + D VT L + C H
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Query: 235 AGLVDKGWELFNSMVNSYGLQPGF 258
+ EL + Y L+ F
Sbjct: 408 ESFLPSLKEL-----HCYSLKQEF 426
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 126/260 (48%), Gaps = 16/260 (6%)
Query: 49 TVPIRNK-IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAIS 107
+ +RN + T +I+ Y G + +FD++ ++ W ++IS Y +NEL E +
Sbjct: 113 STRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 172
Query: 108 LFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMY 166
F EM++ P + T+ + A ++ + G +HG+ VKT D+ + N+LVS Y
Sbjct: 173 TFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY 232
Query: 167 AKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF----GLYPDT 222
G + D+ ++F M R+ +SWNSMI SD+G + E+ + M+E PD
Sbjct: 233 GTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV 292
Query: 223 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAE 278
T + VL CA + G V+ + ++ D + +++++ + G + +A
Sbjct: 293 ATLVTVLPVCAREREIGLG-----KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA- 346
Query: 279 EFVLRLPVEPNHAIWGALVG 298
+ + ++ N W +VG
Sbjct: 347 QMIFKMNNNKNVVSWNTMVG 366
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 130/289 (44%), Gaps = 13/289 (4%)
Query: 52 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
+ N++ ++ Y G + A +F + + +W ++I G+ Q+ ++ +
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
M G P + T L A + L G+++HG ++ E DL + S++S+Y CGE
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
+ +F M + +SWN++I G +G AL V+ M+ +G+ ++ + V A
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPVE 287
C+ + G E ++Y L+ D +I S+I++ + G + + + L E
Sbjct: 607 CSLLPSLRLGRE-----AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-E 660
Query: 288 PNHAIWGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 333
+ A W A++ G+ GL+K + + D L G + CN
Sbjct: 661 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 114/247 (46%), Gaps = 30/247 (12%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ Y + G + AQ +F +N ++W M+ G+ + G D+
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL--------- 381
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
M++G ++ A+ +++ + V F ++L ++LH
Sbjct: 382 --RQMLAG--GEDVKADEVTILNAV------------PVCFHE----SFLPSLKELHCYS 421
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+K + Y+ ++ N+ V+ YAKCG + + R+F + + SWN++I G + +L
Sbjct: 422 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSL 481
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+ M GL PD+ T +L+AC+ + G E+ ++ ++ L+ Y+S+++L
Sbjct: 482 DAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSL 540
Query: 268 LGRAGKV 274
G++
Sbjct: 541 YIHCGEL 547
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 111 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM-QVKTIYEYDLILENSLVSMYAKC 169
E + F + +L A G ++ GR++H + T D +L +++MYA C
Sbjct: 74 ESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC 133
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE-FGLYPDTVTFLGV 228
G DDS +F + ++ WN++I S + E L + M+ L PD T+ V
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 193
Query: 229 LTACAHAGLVDKGWEL-FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 287
+ AC AG+ D G L + +V GL ++++ G G V DA + +P E
Sbjct: 194 IKAC--AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP-E 250
Query: 288 PNHAIWGALVGV 299
N W +++ V
Sbjct: 251 RNLVSWNSMIRV 262
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 192/343 (55%), Gaps = 6/343 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
+++ Y+ G + A ++FD +P RN + W MI+G + G KA + MP+R +
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
+WT++I GY + + EAI LF M+A P T + A+ ++ L +H
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 147 QVKTIY-EYDLILENSLVSMYAKCGEIDDSYRIFSNM--AYRDKISWNSMIMGLSDHGRA 203
K + D+ + NSL+ YAKCG I +++ F + ++ +SW +MI + HG
Sbjct: 282 VGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMG 341
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW-ELFNSMVNSYGLQPGFDHYI 262
EA+++++ M GL P+ VT + VL AC+H GL ++ + E FN+MVN Y + P HY
Sbjct: 342 KEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYG 401
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
++++L R G++++AE+ L +P+E +W L+G C + DA++A R T++L+EL+
Sbjct: 402 CLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYD-DAELAERVTRKLMELER 460
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
+ +V + NI+ R ++ RK+M ++GV K PG S +
Sbjct: 461 SHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 152 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYE 211
+E + ++ +LV MY G + D++++F M R+ ++WN MI GL++ G +AL E
Sbjct: 154 FESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLE 213
Query: 212 TMLEFGLYPD--TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 269
M P+ V++ ++ A + LF+ MV ++P ++I+ +
Sbjct: 214 KM------PNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVW 267
Query: 270 RAGKVK 275
G +K
Sbjct: 268 NLGDLK 273
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 198/329 (60%), Gaps = 2/329 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ ++ Y G++ A +FD MP R+ + W+ M+ GY Q EA+ LF E + +
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ +F+ + + L+ GRQ+HG+ +K+ ++ + +SLVS+Y+KCG + +Y++
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F+ + ++ WN+M+ + H + + +++ M G+ P+ +TFL VL AC+HAGLV
Sbjct: 275 FNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
D+G F+ M S ++P HY S++++LGRAG++++A E + +P++P ++WGAL+
Sbjct: 335 DEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLT 393
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C + K + ++A+ A ++ EL P+++ H++L N YAA+ R + RK +R +G +K
Sbjct: 394 SCTVHK-NTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDI 387
G SW+ + +VH F++G+R ++I
Sbjct: 453 ETGLSWVEERNKVHTFAAGERRHEKSKEI 481
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 122/237 (51%), Gaps = 2/237 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + F + F+ P + S W+S+IS + QNEL ++ +MMA P
Sbjct: 56 LINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPD 115
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ + ++ D GR +H + +KT Y+ D+ + +SLV MYAKCGEI + ++F
Sbjct: 116 DHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFD 175
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M R+ ++W+ M+ G + G EAL +++ L L + +F V++ CA++ L++
Sbjct: 176 EMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLEL 235
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G ++ + + S+++L + G + A + +PV+ N IW A++
Sbjct: 236 GRQI-HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAML 290
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 193/342 (56%), Gaps = 6/342 (1%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
M+ YV ++E A++ F+ +P +N W+ M+SGY G V +A +F + RD + W
Sbjct: 183 MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIW 242
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 149
++I+GY QN +AI F M G+ P T + + A LD GR++H +
Sbjct: 243 NTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINH 302
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
E + + N+L+ MYAKCG+++++ +F +++ R NSMI L+ HG+ EAL +
Sbjct: 303 RGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEM 362
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 269
+ TM L PD +TF+ VLTAC H G + +G ++F+ M + ++P H+ +I+LLG
Sbjct: 363 FSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLG 421
Query: 270 RAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN---AP 326
R+GK+K+A V + V+PN + GAL+G C + D ++A + K + + +
Sbjct: 422 RSGKLKEAYRLVKEMHVKPNDTVLGALLGACKV-HMDTEMAEQVMKIIETAGSITNSYSE 480
Query: 327 GHVA-LCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 367
H+A + N+YA +R +LR EM +G+ K+PG S +++
Sbjct: 481 NHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 137/254 (53%), Gaps = 14/254 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP-DRDS 86
+S+I+ Y + G + A+++FD +P RN W MI GY+S G A LF+ + R++
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNT 144
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN-GTFAVLFGAMGSVAYLDQGRQLHG 145
+ W MI GY + I +A LF M F N ++V+ G + ++ R+
Sbjct: 145 VTWIEMIKGYGKRIEIEKARELFERM---PFELKNVKAWSVMLGVYVNNRKMEDARKF-- 199
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+ I E + + + ++S Y + G++ ++ IF + RD + WN++I G + +G + +
Sbjct: 200 --FEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDD 257
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS-- 263
A+ + M G PD VT +L+ACA +G +D G E+ +S++N G++ + ++S
Sbjct: 258 AIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV-HSLINHRGIE--LNQFVSNA 314
Query: 264 IINLLGRAGKVKDA 277
+I++ + G +++A
Sbjct: 315 LIDMYAKCGDLENA 328
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 7/208 (3%)
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK 149
+++I ++ +A+ L+G + G +L V + G+ LH +K
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIK 74
Query: 150 TIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
D+++ +SL+SMY KCG + + ++F M R+ +WN+MI G +G A A +
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGL 134
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLG 269
+E E + +TVT++ ++ ++K ELF M + L+ + ++ +
Sbjct: 135 FE---EISVCRNTVTWIEMIKGYGKRIEIEKARELFERM--PFELK-NVKAWSVMLGVYV 188
Query: 270 RAGKVKDAEEFVLRLPVEPNHAIWGALV 297
K++DA +F +P E N +W ++
Sbjct: 189 NNRKMEDARKFFEDIP-EKNAFVWSLMM 215
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 196/355 (55%), Gaps = 4/355 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ Y + + A+ FD + ++ +W M+ G++ G + A +FD MP RD +
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 88 AWTSMISGYVQNELIAEAI-SLFGEM-MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
+W S++ GY + + LF EM + P T L + L GR +HG
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHG 392
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+ ++ + D L ++L+ MY KCG I+ ++ +F +D W SMI GL+ HG +
Sbjct: 393 LVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQ 452
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
AL ++ M E G+ P+ VT L VLTAC+H+GLV++G +FN M + +G P +HY S++
Sbjct: 453 ALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLV 512
Query: 266 NLLGRAGKVKDAEEFVL-RLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
+LL RAG+V++A++ V ++P+ P+ ++WG+++ C D + A A LL+L+P
Sbjct: 513 DLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACR-GGEDIETAELALTELLKLEPEK 571
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
G+V L NIYA R R+ M +GV+K G S ++ +H F + ++
Sbjct: 572 EGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEK 626
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 13/268 (4%)
Query: 58 WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF 117
W ++ Y+ G A +F MP D ++ MI GY + EA+ L+ +M++ G
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGM--QVKTIYEYDLILENSLVSMYAKCGEIDDS 175
P T L G ++ + G+ +HG + +Y +LIL N+L+ MY KC E +
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
R F M +D SWN+M++G G A V++ M + D V++ +L +
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK----RDLVSWNSLLFGYSKK 344
Query: 236 GLVDKG-WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE---EFVLRLPVEPNHA 291
G + ELF M ++P +S+I+ G++ V+RL ++ +
Sbjct: 345 GCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAF 404
Query: 292 IWGALVGV---CGLSKTDADVASRATKR 316
+ AL+ + CG+ + V AT++
Sbjct: 405 LSSALIDMYCKCGIIERAFMVFKTATEK 432
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
P+ + + +MIS ++ E L+ M+ H SP TF L M + ++L + +
Sbjct: 96 PNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYL---MKASSFLSEVK 150
Query: 142 QLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
Q+H + V L NSLV Y + G + ++F+ M + D S+N MI+G +
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
G + EAL +Y M+ G+ PD T L +L C H
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 214 bits (544), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 193/351 (54%), Gaps = 1/351 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I Y + G L+ A+ LFD + ++ + + +ISGY++ G V +A LF M
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
W +MISG +QN E I+ F EM+ G P T + L ++ + L G+++H
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
++ + ++ + S++ YAK G + + R+F N R I+W ++I + HG + A
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++++ M G PD VT VL+A AH+G D +F+SM+ Y ++PG +HY ++++
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
L RAGK+ DA EF+ ++P++P +WGAL+ + D ++A A RL E++P N
Sbjct: 513 LSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASV-LGDLEIARFACDRLFEMEPENTGN 571
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
+ + N+Y R E +R +M+ G++K PG SWI + + F + D
Sbjct: 572 YTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKD 622
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 35/334 (10%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
+ +I+ Y + + +A +FD + +RN ++ ++ Y S F A LF +
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLF--------L 112
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W S Y + ++IS+ + A L+G G++ RQ+HG
Sbjct: 113 SWIGS-SCYSSDAARPDSISISCVLKA-----LSGCDDFWLGSL--------ARQVHGFV 158
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
++ ++ D+ + N +++ Y KC I+ + ++F M+ RD +SWNSMI G S G +
Sbjct: 159 IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCK 218
Query: 208 TVYETMLEFGLY-PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+Y+ ML + P+ VT + V AC + + G E+ M+ ++ +Q ++I
Sbjct: 219 KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIG 277
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG---VCGLSKTDADVASRATKRLLELDPL 323
+ G + A + E + +GA++ GL K A E++ +
Sbjct: 278 FYAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHGLVK-------EAMALFSEMESI 329
Query: 324 NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
A+ + N+ H E+ + +EM G R
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSR 363
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 40/266 (15%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N MI Y + +E A+++FD + R+ ++W MISGY +G F+ C
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGS-FEDCK----------- 218
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
++ M+A F P T +F A G + L G ++H
Sbjct: 219 -------------------KMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKK 259
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
++ + DL L N+++ YAKCG +D + +F M+ +D +++ ++I G HG EA
Sbjct: 260 MIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEA 319
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+ ++ M GL G++ H +++ F M+ G +P S++
Sbjct: 320 MALFSEMESIGLSTWNAMISGLMQNNHHEEVINS----FREMIRC-GSRPNTVTLSSLLP 374
Query: 267 LLGRAGKVKDAEE---FVLRLPVEPN 289
L + +K +E F +R + N
Sbjct: 375 SLTYSSNLKGGKEIHAFAIRNGADNN 400
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 180/322 (55%), Gaps = 1/322 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y+ G +F A FD + ++ I+W+S+I GY Q EA+ LF +
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID 312
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ + + G A L QG+Q+ + VK + + NS+V MY KCG +D++ + F+
Sbjct: 313 SFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFA 372
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M +D ISW +I G HG +++ ++ ML + PD V +L VL+AC+H+G++ +
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKE 432
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G ELF+ ++ ++G++P +HY +++LLGRAG++K+A+ + +P++PN IW L+ +C
Sbjct: 433 GEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLC 492
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ D ++ K LL +D N +V + N+Y E + R+ IKG++K
Sbjct: 493 RVH-GDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEA 551
Query: 361 GCSWILVKGRVHVFSSGDRLEP 382
G SW+ ++ VH F SG+ P
Sbjct: 552 GMSWVEIEREVHFFRSGEDSHP 573
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 111/200 (55%), Gaps = 2/200 (1%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N I +I Y + A +FDSMP+R+ ++W++++SG+V N + ++SLF EM
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P TF+ A G + L++G Q+HG +K +E + + NSLV MY+KCG I+
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL--YPDTVTFLGVLTA 231
++ ++F + R ISWN+MI G G S+AL + M E + PD T +L A
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 219
Query: 232 CAHAGLVDKGWELFNSMVNS 251
C+ G++ G ++ +V S
Sbjct: 220 CSSTGMIYAGKQIHGFLVRS 239
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 9/225 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-- 118
++ Y G++ +A +F + DR I+W +MI+G+V ++A+ FG M
Sbjct: 148 LVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKER 207
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE--YDLILENSLVSMYAKCGEIDDSY 176
P T L A S + G+Q+HG V++ + + SLV +Y KCG + +
Sbjct: 208 PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSAR 267
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+ F + + ISW+S+I+G + G EA+ +++ + E D+ ++ A
Sbjct: 268 KAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFA 327
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEE 279
L+ +G ++ V L G + + S++++ + G V +AE+
Sbjct: 328 LLRQGKQMQALAVK---LPSGLETSVLNSVVDMYLKCGLVDEAEK 369
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
DQG Q+H +K+ +LI N L+ MY KC E +Y++F +M R+ +SW++++ G
Sbjct: 23 DQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+G +L+++ M G+YP+ TF L AC ++KG + ++ + L+ G
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ-----IHGFCLKIG 137
Query: 258 FDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
F+ + S++++ + G++ +AE+ V R V+ + W A++
Sbjct: 138 FEMMVEVGNSLVDMYSKCGRINEAEK-VFRRIVDRSLISWNAMI 180
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM----P 82
LNS+++ Y++ G +++A++ F + +++ I+WT +I+GY G K+ +F M
Sbjct: 351 LNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI 410
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+ D + + +++S + +I E LF +++ HG P +A + +G L + +
Sbjct: 411 EPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAK 470
Query: 142 QL 143
L
Sbjct: 471 HL 472
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 194/334 (58%), Gaps = 3/334 (0%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 115
I T ++ Y+ G++ A LF+SM +D +AW + ++ VQ A A+ F +M A
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 116 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
+ T + A G + L+ G +++ K + ++I+EN+ + M+ KCG + +
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
+F M R+ +SW++MI+G + +G + EALT++ TM GL P+ VTFLGVL+AC+HA
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHA 324
Query: 236 GLVDKGWELFNSMV--NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
GLV++G F+ MV N L+P +HY +++LLGR+G +++A EF+ ++PVEP+ IW
Sbjct: 325 GLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIW 384
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
GAL+G C + + D + + L+E P HV L NIYAA + + +R +MR
Sbjct: 385 GALLGACAVHR-DMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRK 443
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
G +K S + +G++H F+ GD+ P + I
Sbjct: 444 LGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAI 477
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ + G + A +FD M W ++ GYV+N+L E++ L+ +M G
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T+ + A+ + G LH VK + I+ LV MY K GE+ + +
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFL 166
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F +M +D ++WN+ + G ++ AL + M + D+ T + +L+AC G +
Sbjct: 167 FESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSL 226
Query: 239 DKGWELFN 246
+ G E+++
Sbjct: 227 EIGEEIYD 234
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 13 NALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSA 68
N + + FD ++ SM++ Q G LE +E++D N I + +L
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC 258
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
G A LF+ M R+ ++W++MI GY N EA++LF M G P TF +
Sbjct: 259 GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVL 318
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILE------NSLVSMYAKCGEIDDSYRIFSNM 182
A +++G++ + V++ D LE +V + + G ++++Y M
Sbjct: 319 SACSHAGLVNEGKRYFSLMVQS---NDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM 375
Query: 183 AYR-DKISWNSMIMGLSDH 200
D W +++ + H
Sbjct: 376 PVEPDTGIWGALLGACAVH 394
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 179/307 (58%), Gaps = 2/307 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ ++ Y+ G++ A LFD MP RDS+ +T+M GYVQ +++F EM GF+
Sbjct: 173 SALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA 232
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ L A G + L G+ +HG ++ L L N++ MY KC +D ++ +
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTV 292
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F NM+ RD ISW+S+I+G G + +++ ML+ G+ P+ VTFLGVL+ACAH GLV
Sbjct: 293 FVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLV 352
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+K W L+ ++ Y + P HY S+ + + RAG +++AE+F+ +PV+P+ A+ GA++
Sbjct: 353 EKSW-LYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLS 411
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C + + +V R + L++L P A +V L +Y+A R E SLR+ M+ K + K
Sbjct: 412 GCKV-YGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISK 470
Query: 359 APGCSWI 365
PGCS I
Sbjct: 471 VPGCSSI 477
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSV 134
+F MP R+ +W +I + ++ +++I LF M P + T ++ A +
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
G +H + +K + L + ++LV MY G++ + ++F +M RD + + +M
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
G G A L ++ M G D+V + +L AC G + G
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 254
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 183/321 (57%), Gaps = 1/321 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y GQ+ A +FD M +++ I+W S+I+ YVQN A+ LF E+
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + T A + A L +GR++H VK+ Y + I+ NSLV MYA CG+++D+ +
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F+++ +D +SWNS+IM + HG ++ ++ M+ + P+ TF +L AC+ +G+V
Sbjct: 489 FNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
D+GWE F SM YG+ PG +HY +++L+GR G A+ F+ +P P IWG+L+
Sbjct: 549 DEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLN 608
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
+ D +A A +++ +++ N +V L N+YA R ++ ++ M KG+ +
Sbjct: 609 A-SRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISR 667
Query: 359 APGCSWILVKGRVHVFSSGDR 379
S + KG+ HVF++GDR
Sbjct: 668 TSSRSTVEAKGKSHVFTNGDR 688
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 129/244 (52%), Gaps = 16/244 (6%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS Y+ G + A +F+ MP+RD ++W SMISGY+ ++ LF EM+ GF P
Sbjct: 171 LISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD 230
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIF 179
+ GA V G+++H V++ E D+++ S++ MY+K GE+ + RIF
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF 290
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE-FGLYPDTVTFLGVLTACAHAGLV 238
+ M R+ ++WN MI + +GR ++A ++ M E GL PD +T + +L A A
Sbjct: 291 NGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----- 345
Query: 239 DKGWELFNSMVNSYGLQPGF-DHYI---SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
L ++ Y ++ GF H + ++I++ G G++K AE R+ E N W
Sbjct: 346 ----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM-AEKNVISWN 400
Query: 295 ALVG 298
+++
Sbjct: 401 SIIA 404
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N A T + G+ + + A LFD M D+ W MI G+ L EA+ + M+
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G T+ + ++ ++ L++G+++H M +K + D+ + NSL+S+Y K G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
D+ ++F M RD +SWNSMI G G +L +++ ML+ G PD + + L AC+
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
H G E+ V S SI+++ + G+V AE + ++ N W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER-IFNGMIQRNIVAW 301
Query: 294 GALVG 298
++G
Sbjct: 302 NVMIG 306
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 151/327 (46%), Gaps = 12/327 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGF 117
T ++ Y G+V A +F+ M R+ +AW MI Y +N + +A F +M +G
Sbjct: 271 TSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGL 330
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P T L A + + +GR +HG ++ + ++LE +L+ MY +CG++ +
Sbjct: 331 QPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEV 386
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
IF MA ++ ISWNS+I +G+ AL +++ + + L PD+ T +L A A +
Sbjct: 387 IFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLS 446
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +G E+ +V S S++++ G ++DA + + ++ + W +++
Sbjct: 447 LSEGREIHAYIVKSRYWSNTII-LNSLVHMYAMCGDLEDARKCFNHILLK-DVVSWNSII 504
Query: 298 ---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIE-LTSLRKEMRI 353
V G + + S + + +A C+I D E S+++E I
Sbjct: 505 MAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGI 564
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGDRL 380
+ GC L+ GR FS+ R
Sbjct: 565 DPGIEHYGCMLDLI-GRTGNFSAAKRF 590
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 195/347 (56%), Gaps = 13/347 (3%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R++ ++ Y G++ A +F M DRD + W +MI+GYV +E +A+ L +M
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 113 ------MAHGFS-----PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS 161
++ G S P + T + + +++ L +G+++H +K D+ + ++
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 557
Query: 162 LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 221
LV MYAKCG + S ++F + ++ I+WN +IM HG EA+ + M+ G+ P+
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPN 617
Query: 222 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 281
VTF+ V AC+H+G+VD+G +F M YG++P DHY +++LLGRAG++K+A + +
Sbjct: 618 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 677
Query: 282 LRLPVEPNHA-IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDR 340
+P + N A W +L+G + + ++ A + L++L+P A +V L NIY++
Sbjct: 678 NMMPRDFNKAGAWSSLLGASRI-HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 736
Query: 341 HIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+ T +R+ M+ +GVRK PGCSWI VH F +GD P E +
Sbjct: 737 WDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 107/194 (55%), Gaps = 6/194 (3%)
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
W ++ V++ L+ EA+ + +M+ G P N F L A+ + ++ G+Q+H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 149 KTIYEYD-LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K Y D + + N+LV++Y KCG+ Y++F ++ R+++SWNS+I L + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG-FDHYI--SI 264
+ ML+ + P + T + V+TAC++ + + + V++YGL+ G + +I ++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG--LMMGKQVHAYGLRKGELNSFIINTL 242
Query: 265 INLLGRAGKVKDAE 278
+ + G+ GK+ ++
Sbjct: 243 VAMYGKLGKLASSK 256
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 123/265 (46%), Gaps = 22/265 (8%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLF-GEM 112
N + ++ Y + QV +FD M DR W +MI+GY QNE EA+ LF G
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ G + T A + A + +HG VK + D ++N+L+ MY++ G+I
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF-----------GLYPD 221
D + RIF M RD ++WN+MI G +AL + M L P+
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516
Query: 222 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDA 277
++T + +L +CA + KG E +++Y ++ +++ +++ + G ++ +
Sbjct: 517 SITLMTILPSCAALSALAKGKE-----IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 571
Query: 278 EEFVLRLPVEPNHAIWGALVGVCGL 302
+ ++P + N W ++ G+
Sbjct: 572 RKVFDQIP-QKNVITWNVIIMAYGM 595
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 9 DYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSA 68
+YA AL + + D L I+ +V K D+V + N +++ Y
Sbjct: 97 NYAFPALLKAVADLQDMELGKQIHAHVY-----KFGYGVDSVTVANT-----LVNLYRKC 146
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
G +FD + +R+ ++W S+IS E A+ F M+ P + T +
Sbjct: 147 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 206
Query: 129 GAMGSVAY---LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 185
A ++ L G+Q+H ++ E + + N+LV+MY K G++ S + + R
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGLRK-GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 265
Query: 186 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 245
D ++WN+++ L + + EAL M+ G+ PD T VL AC+H ++ G EL
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL- 324
Query: 246 NSMVNSYGLQPG 257
++Y L+ G
Sbjct: 325 ----HAYALKNG 332
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 202/376 (53%), Gaps = 14/376 (3%)
Query: 28 NSMINGYVQAGQLEKAQELF-----DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
N+++ Y ++G +A LF + VP N I W +I L GQV +A D+F M
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVP-PNVITWNLIILSLLRNGQVDEAKDMFLQMQ 503
Query: 83 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ I+WT+M++G VQN EAI +M G P + V A +A L
Sbjct: 504 SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLH 563
Query: 139 QGRQLHGMQVKTIYEYDLI-LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
GR +HG ++ + L+ +E SLV MYAKCG+I+ + ++F + Y + N+MI
Sbjct: 564 IGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAY 623
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+ +G EA+ +Y ++ GL PD +T VL+AC HAG +++ E+F +V+ ++P
Sbjct: 624 ALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPC 683
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
+HY +++LL AG+ + A + +P +P+ + +LV C + ++ +++L
Sbjct: 684 LEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCN-KQRKTELVDYLSRKL 742
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGR--VHVFS 375
LE +P N+ +V + N YA E+ +R+ M+ KG++K PGCSWI + G VHVF
Sbjct: 743 LESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFV 802
Query: 376 SGDRLEPHVEDILLQI 391
+ D+ + +I + +
Sbjct: 803 ANDKTHTRINEIQMML 818
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 156/331 (47%), Gaps = 44/331 (13%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTV------PIR- 53
MY G++D AS + + + + + N+++ GYVQ G+ E+A LF + P R
Sbjct: 217 MYGKCGVLDDASKVFD-EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRV 275
Query: 54 --------------------------------NKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ I T +++ Y G + A +FD M
Sbjct: 276 TVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM 335
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
++D + W +ISGYVQ L+ +AI + M T A L A L G+
Sbjct: 336 FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGK 395
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
++ ++ +E D++L ++++ MYAKCG I D+ ++F + +D I WN+++ ++ G
Sbjct: 396 EVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESG 455
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+ EAL ++ M G+ P+ +T+ ++ + G VD+ ++F M S G+ P +
Sbjct: 456 LSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISW 514
Query: 262 ISIINLLGRAGKVKDAEEFVLRLP---VEPN 289
+++N + + G ++A F+ ++ + PN
Sbjct: 515 TTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 31 INGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWT 90
++GYV LE D V + + +A Y G + A +FD +PDR+++AW
Sbjct: 195 VHGYVVKSGLE------DCVFVASSLA-----DMYGKCGVLDDASKVFDEIPDRNAVAWN 243
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 150
+++ GYVQN EAI LF +M G P T + A ++ +++G+Q H + +
Sbjct: 244 ALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVN 303
Query: 151 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 210
E D IL SL++ Y K G I+ + +F M +D ++WN +I G G +A+ +
Sbjct: 304 GMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMC 363
Query: 211 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIIN 266
+ M L D VT +++A A + G E V Y ++ F+ I ++++
Sbjct: 364 QLMRLEKLKYDCVTLATLMSAAARTENLKLGKE-----VQCYCIRHSFESDIVLASTVMD 418
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ + G + DA++ V VE + +W L+
Sbjct: 419 MYAKCGSIVDAKK-VFDSTVEKDLILWNTLLA 449
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 124/246 (50%), Gaps = 4/246 (1%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
RN+ T ++ Y + A LF + R+ +W ++I + L A+ F EM
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ + P N + A G++ + GR +HG VK+ E + + +SL MY KCG +
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVL 224
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
DD+ ++F + R+ ++WN++++G +G+ EA+ ++ M + G+ P VT L+A
Sbjct: 225 DDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 233 AHAGLVDKGWELFN-SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
A+ G V++G + ++VN G++ S++N + G ++ AE R+ E +
Sbjct: 285 ANMGGVEEGKQSHAIAIVN--GMELDNILGTSLLNFYCKVGLIEYAEMVFDRM-FEKDVV 341
Query: 292 IWGALV 297
W ++
Sbjct: 342 TWNLII 347
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 22/257 (8%)
Query: 47 FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAI 106
F+T+P NK+ ++ +S+ K D P S ++ +S +N I EA+
Sbjct: 6 FNTIP--NKVPFS------VSSKPSSKHHDEQAHSPS--STSYFHRVSSLCKNGEIKEAL 55
Query: 107 SLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT--IYEYDLILENSLVS 164
SL EM + + L G+Q+H +K Y + +E LV
Sbjct: 56 SLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVI 115
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 224
YAKC ++ + +FS + R+ SW ++I G AL + MLE ++PD
Sbjct: 116 FYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFV 175
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEF 280
V AC W F V+ Y ++ G + + S+ ++ G+ G + DA +
Sbjct: 176 VPNVCKACGAL-----KWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 281 VLRLPVEPNHAIWGALV 297
+P + N W AL+
Sbjct: 231 FDEIP-DRNAVAWNALM 246
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 189/342 (55%), Gaps = 11/342 (3%)
Query: 38 GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYV 97
Q+ K +E D ++ + ++ Y+ +G A +FD M +R+ + W S+IS
Sbjct: 260 AQIVKRKEKVD------QVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLS 313
Query: 98 QNELIAEAISLFGEMMAH--GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 155
+ + E +LF +M GFS T + A VA L G+++H +K+ + D
Sbjct: 314 KKVRVHEMFNLFRKMQEEMIGFS--WATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 156 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 215
+ L NSL+ MY KCGE++ S R+F M +D SWN M+ + +G E + ++E M+E
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Query: 216 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 275
G+ PD +TF+ +L+ C+ GL + G LF M + + P +HY ++++LGRAGK+K
Sbjct: 432 SGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIK 491
Query: 276 DAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIY 335
+A + + +P +P+ +IWG+L+ C L + V A K L L+P N +V + NIY
Sbjct: 492 EAVKVIETMPFKPSASIWGSLLNSCRL-HGNVSVGEIAAKELFVLEPHNPGNYVMVSNIY 550
Query: 336 AANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG 377
A + +R+ M+ +GV+K GCSW+ VK ++ +F +G
Sbjct: 551 ADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 4/205 (1%)
Query: 74 ACDLFDSMPDRDSIA---WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 130
A +FD + D + W +M GY +N +A+ ++ +M+ P N + +V A
Sbjct: 186 ARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKA 245
Query: 131 MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISW 190
+ L GR +H VK + D ++ N L+ +Y + G DD+ ++F M+ R+ ++W
Sbjct: 246 CVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTW 305
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
NS+I LS R E ++ M E + T +L AC+ + G E+ ++
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 251 SYGLQPGFDHYISIINLLGRAGKVK 275
S +P S++++ G+ G+V+
Sbjct: 366 SKE-KPDVPLLNSLMDMYGKCGEVE 389
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 186/349 (53%), Gaps = 1/349 (0%)
Query: 40 LEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN 99
L+ + T + N + +I Y G A +F SM + +AW SMIS Y +N
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN 555
Query: 100 ELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILE 159
L +I LF M++ G P + + + A+ S A L +G+ LHG ++ D L+
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK 615
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
N+L+ MY KCG + IF M ++ I+WN MI G HG AL++++ M + G
Sbjct: 616 NALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGES 675
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
PD VTFL +++AC H+G V++G +F M YG++P +HY ++++LLGRAG +++A
Sbjct: 676 PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYS 735
Query: 280 FVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAND 339
F+ +P+E + +IW L+ + + ++ + ++LL ++P +V L N+Y
Sbjct: 736 FIKAMPIEADSSIWLCLLSA-SRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAG 794
Query: 340 RHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDIL 388
E L M+ KG+ K PGCSWI V R +VF SG P +I
Sbjct: 795 LKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIF 843
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 4/241 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++S Y G V +A +F + D+ W +M++ Y +N+ A+ LFG M
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + T + + + + G+ +H K + +E++L+++Y+KCG D+Y +
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLGVLTACAHAG 236
F +M +D ++W S+I GL +G+ EAL V+ M + L PD+ V ACA
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
+ G ++ SM+ + GL S+I+L + G + A + + E N W ++
Sbjct: 491 ALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSM 548
Query: 297 V 297
+
Sbjct: 549 I 549
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 123/282 (43%), Gaps = 33/282 (11%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
+D S++N YV+ G L+ A ++FD W+ SG +
Sbjct: 93 YDPFIATSLVNMYVKCGFLDYAVQVFD--------GWSQSQSG----------------V 128
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL--DQ 139
RD W SMI GY + E + F M+ G P + +++ M ++
Sbjct: 129 SARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE 188
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS-WNSMIMGLS 198
G+Q+HG ++ + D L+ +L+ MY K G D++R+F + + + WN MI+G
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG 248
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
G +L +Y + + +F G L AC+ + G ++ +V GL
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK-MGLHN-- 305
Query: 259 DHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
D Y+ S++++ + G V +AE V V+ IW A+V
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAET-VFSCVVDKRLEIWNAMVA 346
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIA-WTSMISGYVQNELIAEAISLFGEMMAHGF 117
T +I Y G A +F + D+ ++ W MI G+ + + ++ L+ +
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSV 268
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
++ +F GA GRQ+H VK D + SL+SMY+KCG + ++
Sbjct: 269 KLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAET 328
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+FS + + WN+M+ +++ AL ++ M + + PD+ T V++ C+ GL
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Query: 238 VDKG----WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
+ G ELF + S +++ L + G DA V + E + W
Sbjct: 389 YNYGKSVHAELFKRPIQSTSTIES-----ALLTLYSKCGCDPDA-YLVFKSMEEKDMVAW 442
Query: 294 GALV-GVC 300
G+L+ G+C
Sbjct: 443 GSLISGLC 450
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 23/228 (10%)
Query: 123 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF--- 179
TF L A ++ L G+ +HG V + YD + SLV+MY KCG +D + ++F
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 180 ----SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
S ++ RD WNSMI G R E + + ML FG+ PD + V++
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 236 GLVDK-------GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEP 288
G + G+ L NS+ L+ ++I++ + G DA + + +
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKT------ALIDMYFKFGLSIDAWRVFVEIEDKS 235
Query: 289 NHAIWGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 333
N +W ++ G G+ ++ D+ A ++L + G + C+
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACS 283
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 200/372 (53%), Gaps = 9/372 (2%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
NS+++G A L+ A+ L + + I W + SGY + G+ KA D+ M +
Sbjct: 295 NSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 84 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
+ + ++WT++ SG +N A+ +F +M G P T + L +G ++ L
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHS 414
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+++HG ++ D + +LV MY K G++ + IF + + SWN M+MG +
Sbjct: 415 GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAM 474
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
GR E + + MLE G+ PD +TF VL+ C ++GLV +GW+ F+ M + YG+ P +
Sbjct: 475 FGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIE 534
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLE 319
H +++LLGR+G + +A +F+ + ++P+ IWGA + C + + D ++A A KRL
Sbjct: 535 HCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHR-DLELAEIAWKRLQV 593
Query: 320 LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
L+P N+ ++ + N+Y+ +R ++ +R MR VR SWI + VH+F + +
Sbjct: 594 LEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGK 653
Query: 380 LEPHVEDILLQI 391
P DI ++
Sbjct: 654 THPDEGDIYFEL 665
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 138/281 (49%), Gaps = 8/281 (2%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP----D 83
NS+I Y + G+LE ++++F+++ RN +W ++S Y G V A L D M
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
D + W S++SGY L +AI++ M G P + + L A+ +L G+ +
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
HG ++ YD+ +E +L+ MY K G + + +F M ++ ++WNS++ GLS
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+A + M + G+ PD +T+ + + A G +K ++ M G+ P + +
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVVSWTA 366
Query: 264 IINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALVGVCG 301
I + + G ++A + +++ E PN A L+ + G
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILG 407
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 1/202 (0%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A LFD MP RD +AW ++ +++ +A+ LF EM G + T L +
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
+GRQ+HG ++ E ++ + NSL+ MY++ G+++ S ++F++M R+ SWNS+
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
+ + G +A+ + + M GL PD VT+ +L+ A GL + M G
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAG 220
Query: 254 LQPGFDHYISIINLLGRAGKVK 275
L+P S++ + G +K
Sbjct: 221 LKPSTSSISSLLQAVAEPGHLK 242
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/333 (34%), Positives = 181/333 (54%), Gaps = 8/333 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSM--PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+I Y +V A +FDS+ +RD + WT MI GY Q+ +A+ L EM
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 119 --PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE-YDLILENSLVSMYAKCGEIDDS 175
P T + A S+A L G+Q+H ++ L + N L+ MYAKCG I D+
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
+F NM +++++W S++ G HG EAL +++ M G D VT L VL AC+H+
Sbjct: 533 RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
G++D+G E FN M +G+ PG +HY +++LLGRAG++ A + +P+EP +W A
Sbjct: 593 GMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVA 652
Query: 296 LVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 355
+ C + ++ A +++ EL + + L N+YA R ++T +R MR KG
Sbjct: 653 FLSCCRI-HGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKG 711
Query: 356 VRKAPGCSWIL-VKGRVHVFSSGDRLEPHVEDI 387
V+K PGCSW+ +KG F GD+ PH ++I
Sbjct: 712 VKKRPGCSWVEGIKGTT-TFFVGDKTHPHAKEI 743
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 142/292 (48%), Gaps = 30/292 (10%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR--- 84
N +++ Y + G +++A +F + +++ ++W M++GY G+ A LF+ M +
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 85 -DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
D + W++ ISGY Q L EA+ + +M++ G P T + SV L G+++
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 144 HGMQVKTIYEYDL---------ILENSLVSMYAKCGEIDDSYRIFSNMA--YRDKISWNS 192
H +K Y DL ++ N L+ MYAKC ++D + +F +++ RD ++W
Sbjct: 388 HCYAIK--YPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 193 MIMGLSDHGRASEALTVYETMLE--FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
MI G S HG A++AL + M E P+ T L ACA + G + ++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ-----IH 500
Query: 251 SYGL---QPGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+Y L Q ++S +I++ + G + DA V + N W +L+
Sbjct: 501 AYALRNQQNAVPLFVSNCLIDMYAKCGSISDA-RLVFDNMMAKNEVTWTSLM 551
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 5/241 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDS--IAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+IS Y+S G + A L P D+ W S+I Y N + + LFG M + ++
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P N TF +F A G ++ + G H + + T + ++ + N+LV+MY++C + D+ ++
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGL 237
F M+ D +SWNS+I + G+ AL ++ M EFG PD +T + VL CA G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G +L V S +Q F ++++ + G + +A + V+ + W A+V
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGN-CLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMV 302
Query: 298 G 298
Sbjct: 303 A 303
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 125/257 (48%), Gaps = 6/257 (2%)
Query: 35 VQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMIS 94
V+ G+ A L T I N +++ Y + A +FD M D ++W S+I
Sbjct: 143 VRCGESAHALSLV-TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIE 201
Query: 95 GYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 153
Y + A+ +F M G P N T + S+ G+QLH V +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261
Query: 154 YDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM 213
++ + N LV MYAKCG +D++ +FSNM+ +D +SWN+M+ G S GR +A+ ++E M
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 214 LEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGK 273
E + D VT+ ++ A GL + + M++S G++P IS+++ G
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGA 380
Query: 274 VKDAEE---FVLRLPVE 287
+ +E + ++ P++
Sbjct: 381 LMHGKEIHCYAIKYPID 397
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 60 CMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
C+I Y G + A +FD+M ++ + WTS+++GY + EA+ +F EM GF
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYR 177
T V+ A +DQG + ++KT++ E+ LV + + G ++ + R
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFN-RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALR 636
Query: 178 IFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFG 217
+ M + W + + HG+ E + E
Sbjct: 637 LIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELA 677
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 187/328 (57%), Gaps = 2/328 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN-GT 123
Y G V A +F+ +P+ D I+W ++ISGY QN +EAI ++ M G N GT
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
+ + A L QG +LHG +K D+ + SL MY KCG ++D+ +F +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
+ + WN++I HG +A+ +++ ML+ G+ PD +TF+ +L+AC+H+GLVD+G
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLS 303
F M YG+ P HY ++++ GRAG+++ A +F+ + ++P+ +IWGAL+ C +
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRV- 632
Query: 304 KTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
+ D+ A++ L E++P + HV L N+YA+ + + +R KG+RK PG S
Sbjct: 633 HGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Query: 364 WILVKGRVHVFSSGDRLEPHVEDILLQI 391
+ V +V VF +G++ P E++ ++
Sbjct: 693 SMEVDNKVEVFYTGNQTHPMYEEMYREL 720
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 147/317 (46%), Gaps = 39/317 (12%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAG------------- 69
D S N+MI+GY Q+G ++A L + + + + ++S AG
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 70 ------QVF---KACDL-------------FDSMPDRDSIAWTSMISGYVQNELIAEAIS 107
++F K DL FD M RD I+W S+I Y NE AIS
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 108 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV-KTIYEYDLILENSLVSMY 166
LF EM P T L + + + R + G + K + D+ + N++V MY
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394
Query: 167 AKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTF 225
AK G +D + +F+ + D ISWN++I G + +G ASEA+ +Y M E G + + T+
Sbjct: 395 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 454
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+ VL AC+ AG + +G +L ++ + GL S+ ++ G+ G+++DA ++P
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 286 VEPNHAIWGALVGVCGL 302
N W L+ G
Sbjct: 514 -RVNSVPWNTLIACHGF 529
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 144/296 (48%), Gaps = 24/296 (8%)
Query: 3 SVFGLMDYASNALEGNLNNFDD-QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC- 60
SV ++NAL+ N ++ + ++ + + L+ A+ L + + +I C
Sbjct: 29 SVIREFSASANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCI 88
Query: 61 ---MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE-MMAHG 116
+++ Y G V A FD + +RD AW MISGY + +E I F M++ G
Sbjct: 89 SAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSG 148
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
+P TF + A +V G ++H + +K + +D+ + SL+ +Y++ + ++
Sbjct: 149 LTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNAR 205
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP-DTVTFLGVLTACAHA 235
+F M RD SWN+MI G G A EALT L GL D+VT + +L+AC A
Sbjct: 206 ILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEA 260
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVE 287
G ++G ++SY ++ G + + +I+L G+++D ++ R+ V
Sbjct: 261 GDFNRG-----VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 116/295 (39%), Gaps = 85/295 (28%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGY-----------------LSAG--- 69
++N Y G + A+ FD + R+ AW MISGY LS+G
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 70 ------QVFKACD------------------------------------------LFDSM 81
V KAC LFD M
Sbjct: 152 DYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQG 140
P RD +W +MISGY Q+ EA++L ++G ++ T L A ++G
Sbjct: 212 PVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRG 266
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+H +K E +L + N L+ +YA+ G + D ++F M RD ISWNS+I +
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 201 GRASEALTVYETMLEFGLYPDTVTF---------LGVLTAC--AHAGLVDKGWEL 244
+ A+++++ M + PD +T LG + AC + KGW L
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 194/338 (57%), Gaps = 4/338 (1%)
Query: 57 AWTCMISGYLS--AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA 114
A +IS Y+ G + A LF+S+ +D I+W S+I+G+ Q L +A+ F + +
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 401
Query: 115 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
+ F+ L + +A L G+Q+H + K+ + + + +SL+ MY+KCG I+
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 175 SYRIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+ + F ++ + ++WN+MI+G + HG +L ++ M + D VTF +LTAC+
Sbjct: 462 ARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
H GL+ +G EL N M Y +QP +HY + ++LLGRAG V A+E + +P+ P+ +
Sbjct: 522 HTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVL 581
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
+GVC + + ++A++ LLE++P + +V+L ++Y+ + E S++K M+
Sbjct: 582 KTFLGVCR-ACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKE 640
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
+GV+K PG SWI ++ +V F++ DR P +DI + I
Sbjct: 641 RGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMI 678
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 17/283 (6%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y+ G + A LFD MP RDS++W +MISGY + +A LF M G
Sbjct: 41 ILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVD 100
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+F+ L + SV D G Q+HG+ +K YE ++ + +SLV MYAKC ++D++ F
Sbjct: 101 GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFK 160
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVD 239
++ + +SWN++I G A + M ++ + D TF +LT L D
Sbjct: 161 EISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTL-----LDD 215
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGA 295
+ V++ L+ G H I+I N + G V DA+ L + W +
Sbjct: 216 PMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNS 275
Query: 296 LVGVCGLSKTDADVAS-----RATKRLLELDPLNAPGHVALCN 333
++ G SK + ++ + + +E D G ++ C+
Sbjct: 276 MIA--GFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 140/297 (47%), Gaps = 15/297 (5%)
Query: 61 MISGYLSAGQVFKACDLFDSMP-DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
MIS Y G V A +FD + +D I+W SMI+G+ ++EL A LF +M H
Sbjct: 244 MISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVET 303
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK--CGEIDDSYR 177
T+ L A + G+ LHGM +K E N+L+SMY + G ++D+
Sbjct: 304 DIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALS 363
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F ++ +D ISWNS+I G + G + +A+ + + + D F +L +C+
Sbjct: 364 LFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLAT 423
Query: 238 VDKGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
+ G + +++ + GF + ++ S+I + + G ++ A + ++ + + W
Sbjct: 424 LQLGQQ-----IHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAW 478
Query: 294 GALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSL 347
A++ GL + D+ S+ + ++LD + + C+ +EL +L
Sbjct: 479 NAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNL 535
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 185/321 (57%), Gaps = 3/321 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y Q+ + +F M +++++W S+++ YVQN +A L+
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ + + A +A L+ GR +H VK E + + ++LV MY KCG I+DS + F
Sbjct: 310 DFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFD 369
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL--YPDTVTFLGVLTACAHAGLV 238
M ++ ++ NS+I G + G+ AL ++E M G P+ +TF+ +L+AC+ AG V
Sbjct: 370 EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAV 429
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ G ++F+SM ++YG++PG +HY I+++LGRAG V+ A EF+ ++P++P ++WGAL
Sbjct: 430 ENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQN 489
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C + + A + L +LDP ++ HV L N +AA R E ++R+E++ G++K
Sbjct: 490 ACRM-HGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 359 APGCSWILVKGRVHVFSSGDR 379
G SWI VK +VH F + DR
Sbjct: 549 GAGYSWITVKNQVHAFQAKDR 569
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 14/223 (6%)
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
P R+ ++WTS+ISG QN + A+ F EM G P + TF F A+ S+ G+
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+H + VK D+ + S MY K DD+ ++F + R+ +WN+ I G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG--LQPGFD 259
R EA+ + +P+++TF L AC+ W N + +G L+ GFD
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACS-------DWLHLNLGMQLHGLVLRSGFD 241
Query: 260 HYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+S+ N L G+ +++ +E + + N W +LV
Sbjct: 242 TDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVA 283
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 10/226 (4%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LFD +P+R+ W + IS V + EAI F E P + TF A +
Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLH 224
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L+ G QLHG+ +++ ++ D+ + N L+ Y KC +I S IF+ M ++ +SW S++
Sbjct: 225 LNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ +A +Y + + VL+AC AG+ G EL S ++++ ++
Sbjct: 285 YVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMA--GLELGRS-IHAHAVKA 339
Query: 257 GFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ I +++++ G+ G ++D+E+ +P E N +L+G
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIG 384
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R + ++ Y G + + FD MP+++ + S+I GY + A++LF EM
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Query: 113 MAHGFSPLNG--TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAK 168
G P TF L A ++ G ++ +++ Y + E+ +V M +
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 169 CGEIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHGRASEALTVYETMLEF 216
G ++ +Y M + IS W ++ HG+ L E + +
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKL 510
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 180/326 (55%), Gaps = 4/326 (1%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
IS Y + A LFD M R ++WT MISGY + + EA++LF M+ G P
Sbjct: 298 ISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDL 357
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T L G L+ G+ + + ++++ N+L+ MY+KCG I ++ IF
Sbjct: 358 VTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD 417
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
N + ++W +MI G + +G EAL ++ M++ P+ +TFL VL ACAH+G ++K
Sbjct: 418 NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEK 477
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
GWE F+ M Y + PG DHY +++LLGR GK+++A E + + +P+ IWGAL+ C
Sbjct: 478 GWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNAC 537
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ + + +A +A + L L+P A +V + NIYAA +R M+ + ++K P
Sbjct: 538 KIHR-NVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYP 596
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVED 386
G S I V G+ H F+ G+ HVE+
Sbjct: 597 GESVIQVNGKNHSFTVGE--HGHVEN 620
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 7/210 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T + ++ V A +F+ MP+RD+ W +M+SG+ Q+ +A SLF EM + +
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + T L + L +H + ++ + + + N+ +S Y KCG++D + +
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 179 FSNMAYRDK--ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
F + D+ +SWNSM S G A +A +Y ML PD TF+ + +C +
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPE 270
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+ +G +++S+ + G D I IN
Sbjct: 271 TLTQG-----RLIHSHAIHLGTDQDIEAIN 295
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 158/374 (42%), Gaps = 52/374 (13%)
Query: 8 MDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----------DTVPIRNKIA 57
+DYA+ E + D + N+M++G+ Q+G +KA LF D+V + I
Sbjct: 103 VDYAAKVFE-RMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQ 161
Query: 58 WTCM-----------------------------ISGYLSAGQVFKACDLFDSMP--DRDS 86
IS Y G + A +F+++ DR
Sbjct: 162 SASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTV 221
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
++W SM Y +A L+ M+ F P TF L + + L QGR +H
Sbjct: 222 VSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSH 281
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
+ + D+ N+ +SMY+K + + +F M R +SW MI G ++ G EA
Sbjct: 282 AIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEA 341
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI---S 263
L ++ M++ G PD VT L +++ C G ++ G + ++ + YG + D+ + +
Sbjct: 342 LALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARADIYGCKR--DNVMICNA 398
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
+I++ + G + +A + P E W ++ L+ + A + ++++LD
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLE-ALKLFSKMIDLD-- 454
Query: 324 NAPGHVALCNIYAA 337
P H+ + A
Sbjct: 455 YKPNHITFLAVLQA 468
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
AW I V E++ LF EM GF P N TF + A +A + +H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+K+ + D+ + + V M+ KC +D + ++F M RD +WN+M+ G G +A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI--- 264
+++ M + PD+VT + ++ + + +K +L +M ++ G++ G D +++
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAM-HAVGIRLGVDVQVTVANT 193
Query: 265 -INLLGRAGKVKDAE 278
I+ G+ G + A+
Sbjct: 194 WISTYGKCGDLDSAK 208
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 115/243 (47%), Gaps = 15/243 (6%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPI-----RNKIAWTCMISGYLSAGQVFKACDLFDS 80
+L S+I+G + G LE + + I N + +I Y G + +A D+FD+
Sbjct: 359 TLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN 418
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
P++ + WT+MI+GY N + EA+ LF +M+ + P + TF + A L++G
Sbjct: 419 TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Query: 141 RQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGL 197
+ + +K +Y L++ +V + + G+++++ + NM+ + D W +++
Sbjct: 479 WEYFHI-MKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNAC 537
Query: 198 SDHGRASEALTVYETMLEFGLYPD-TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ- 255
H A E++ F L P ++ + A AG+ D G+ S++ ++
Sbjct: 538 KIHRNVKIAEQAAESL--FNLEPQMAAPYVEMANIYAAAGMWD-GFARIRSIMKQRNIKK 594
Query: 256 -PG 257
PG
Sbjct: 595 YPG 597
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 185/320 (57%), Gaps = 2/320 (0%)
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVL 127
G V A +FD + D+D +++ S++S Y Q+ + EA +F ++ + N T + +
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 293
Query: 128 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 187
A+ L G+ +H ++ E D+I+ S++ MY KCG ++ + + F M ++
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
SW +MI G HG A++AL ++ M++ G+ P+ +TF+ VL AC+HAGL +GW FN+
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNA 413
Query: 248 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDA 307
M +G++PG +HY +++LLGRAG ++ A + + R+ ++P+ IW +L+ C + K +
Sbjct: 414 MKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHK-NV 472
Query: 308 DVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 367
++A + RL ELD N ++ L +IYA R ++ +R M+ +G+ K PG S + +
Sbjct: 473 ELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLEL 532
Query: 368 KGRVHVFSSGDRLEPHVEDI 387
G VHVF GD P E I
Sbjct: 533 NGEVHVFLIGDEEHPQREKI 552
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 118/229 (51%), Gaps = 15/229 (6%)
Query: 50 VPIRNKIAWTCMISGYLSAGQVFKACDL---FDSMPDR-DSIAWTSMISGYVQNELIAEA 105
+ +R+K A C +S L + + +L F+ D+ D +W S+I+ ++ AEA
Sbjct: 1 MKVRSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEA 60
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
+ F M P +F A S+ + G+Q H Y+ D+ + ++L+ M
Sbjct: 61 LLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVM 120
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML------EFGLY 219
Y+ CG+++D+ ++F + R+ +SW SMI G +G A +A+++++ +L + ++
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF 180
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
D++ + V++AC+ + KG ++S+ ++ GFD +S+ N L
Sbjct: 181 LDSMGLVSVISACSR--VPAKG---LTESIHSFVIKRGFDRGVSVGNTL 224
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Query: 15 LEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAG 69
++ + F+ +L++++ +G L + + D V IR + I T +I Y G
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYCKCG 336
Query: 70 QVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG 129
+V A FD M +++ +WT+MI+GY + A+A+ LF M+ G P TF +
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Query: 130 AMGSVAYLDQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DK 187
A +G R + M+ + E L +V + + G + +Y + M + D
Sbjct: 397 ACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDS 456
Query: 188 ISWNSMIMGLSDH 200
I W+S++ H
Sbjct: 457 IIWSSLLAACRIH 469
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 190/349 (54%), Gaps = 9/349 (2%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDL 77
D SL +I VQ +EL +V +R ++ + I+ Y AG+ A +
Sbjct: 116 DRYSLPIVIKAAVQIHDFTLGKEL-HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKV 174
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
FD P+R +W ++I G EA+ +F +M G P + T + + G + L
Sbjct: 175 FDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDL 234
Query: 138 DQGRQLHG--MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
QLH +Q KT + D+++ NSL+ MY KCG +D + IF M R+ +SW+SMI+
Sbjct: 235 SLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIV 294
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G + +G EAL + M EFG+ P+ +TF+GVL+AC H GLV++G F M + + L+
Sbjct: 295 GYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELE 354
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 315
PG HY I++LL R G++K+A++ V +P++PN +WG L+G C D ++A
Sbjct: 355 PGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCE-KFGDVEMAEWVAP 413
Query: 316 RLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
++EL+P N +V L N+YA ++ +RK M+ K V K P S+
Sbjct: 414 YMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 125/250 (50%), Gaps = 7/250 (2%)
Query: 53 RNKIAWTCMISGYLSAGQVFKA-CDLFDS-MPDRDSIA--WTSMISGYVQNELIAEAISL 108
RNK+ T ++S S +V + D+F S + D+ IA W +++ Y+++E +AI +
Sbjct: 46 RNKLLAT-LLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQV 104
Query: 109 FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK 168
+ M+ P + ++ A + G++LH + V+ + D E+ +++Y K
Sbjct: 105 YLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCK 164
Query: 169 CGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV 228
GE +++ ++F R SWN++I GL+ GRA+EA+ ++ M GL PD T + V
Sbjct: 165 AGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSV 224
Query: 229 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI-SIINLLGRAGKVKDAEEFVLRLPVE 287
+C G + ++L ++ + + + S+I++ G+ G++ D + +
Sbjct: 225 TASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRM-DLASHIFEEMRQ 283
Query: 288 PNHAIWGALV 297
N W +++
Sbjct: 284 RNVVSWSSMI 293
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 187/334 (55%), Gaps = 3/334 (0%)
Query: 34 YVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMI 93
Y G++ AQ++FD + RN + W MI G+ +G V + LF M +R ++W SMI
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMI 206
Query: 94 SGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYE 153
S + EA+ LF EM+ GF P T + S+ LD G+ +H +
Sbjct: 207 SSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLF 266
Query: 154 YDLI-LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 212
D I + N+LV Y K G+++ + IF M R+ +SWN++I G + +G+ + +++
Sbjct: 267 KDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDA 326
Query: 213 MLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA 271
M+E G + P+ TFLGVL C++ G V++G ELF M+ + L+ +HY ++++L+ R+
Sbjct: 327 MIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRS 386
Query: 272 GKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVAL 331
G++ +A +F+ +PV N A+WG+L+ C S D +A A L++++P N+ +V L
Sbjct: 387 GRITEAFKFLKNMPVNANAAMWGSLLSAC-RSHGDVKLAEVAAMELVKIEPGNSGNYVLL 445
Query: 332 CNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
N+YA R ++ +R M+ +RK+ G S I
Sbjct: 446 SNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 40/256 (15%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+F + + + + + +MI Y E++S F M + G T+A L + S++
Sbjct: 58 VFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSD 117
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L G+ +HG ++T + + +V +Y G + D+ ++F M+ R+ + WN MI G
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRG 177
Query: 197 LSDH-------------------------------GRASEALTVYETMLEFGLYPDTVTF 225
D GR EAL ++ M++ G PD T
Sbjct: 178 FCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATV 237
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFV 281
+ VL A G++D G + +S S GL F +I++ N L ++G + +A +
Sbjct: 238 VTVLPISASLGVLDTG-KWIHSTAESSGL---FKDFITVGNALVDFYCKSGDL-EAATAI 292
Query: 282 LRLPVEPNHAIWGALV 297
R N W L+
Sbjct: 293 FRKMQRRNVVSWNTLI 308
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 188/332 (56%), Gaps = 6/332 (1%)
Query: 61 MISGYLSAGQVFKACDLFDS--MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+I Y +G + + LF+ +RD W SMISGY QN + +F +M+
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T A + A + +D G+QLHG ++ + ++ + ++LV MY+K G I + +
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDM 578
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
FS R+ +++ +MI+G HG A++++ +M E G+ PD +TF+ VL+AC+++GL+
Sbjct: 579 FSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLI 638
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA-IWGALV 297
D+G ++F M Y +QP +HY I ++LGR G+V +A EFV L E N A +WG+L+
Sbjct: 639 DEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLL 698
Query: 298 GVCGLSKTDADVASRATKRLLELDP-LNAPGH-VALCNIYAANDRHIELTSLRKEMRIKG 355
G C L + ++A ++RL + D N G+ V L N+YA + + +R+ MR KG
Sbjct: 699 GSCKL-HGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKG 757
Query: 356 VRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
++K G S I + G V+ F S D+ PH +I
Sbjct: 758 LKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEI 789
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 124/239 (51%), Gaps = 6/239 (2%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPL 120
IS Y G + + +FDS +R+ W +MI YVQN+ + E+I LF E + +
Sbjct: 258 ISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSD 317
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T+ + A+ ++ ++ GRQ HG K E +++ NSL+ MY++CG + S+ +F
Sbjct: 318 EVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFL 377
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+M RD +SWN+MI +G E L + M + G D +T +L+A ++ +
Sbjct: 378 SMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEI 437
Query: 241 GWELFNSMVNSYGLQ-PGFDHYISIINLLGRAGKVKDAEE-FVLRLPVEPNHAIWGALV 297
G + ++ G+Q G + Y +I++ ++G ++ +++ F E + A W +++
Sbjct: 438 GKQTHAFLIRQ-GIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI 493
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 120/262 (45%), Gaps = 18/262 (6%)
Query: 48 DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAIS 107
T IR++++ C G A LFD++P ++ W ++I G++ N L EA+
Sbjct: 38 QTPSIRSRLSKIC------QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALL 91
Query: 108 LFGEMMAHG-FSPLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
+ M F+ + T++ A L G+ +H ++ + ++ NSL++M
Sbjct: 92 FYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNM 151
Query: 166 YAKCGEIDDSY------RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
Y C D + ++F NM ++ ++WN++I GR +EA + M+ +
Sbjct: 152 YVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVK 211
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDA 277
P V+F+ V A + + + K +F ++ G + D ++ S I++ G ++ +
Sbjct: 212 PSPVSFVNVFPAVSISRSIKKA-NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESS 270
Query: 278 EEFVLRLPVEPNHAIWGALVGV 299
V VE N +W ++GV
Sbjct: 271 RR-VFDSCVERNIEVWNTMIGV 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+FD+M ++ +AW ++IS YV+ AEA FG MM P +F +F A+
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 137 LDQGRQLHGMQVKTIYEY--DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
+ + +G+ +K EY DL + +S +SMYA+ G+I+ S R+F + R+ WN+MI
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 195 MGLSDHGRASEALTVY-ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
+ E++ ++ E + + D VT+L +A + V+ G + + ++
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 254 LQPGFDHYISIINLL----GRAGKVKDA 277
P I I+N L R G V +
Sbjct: 350 ELP-----IVIVNSLMVMYSRCGSVHKS 372
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 45/260 (17%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSL-NSMINGYVQAGQLEKAQELFDTV--------- 50
MYS GL+ + EG+ DQ+ NSMI+GY Q G EK +F +
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
Query: 51 -------------------------PIR-----NKIAWTCMISGYLSAGQVFKACDLFDS 80
IR N + ++ Y AG + A D+F
Sbjct: 522 VTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+R+S+ +T+MI GY Q+ + AISLF M G P TF + A +D+G
Sbjct: 582 TKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEG 641
Query: 141 RQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYRIFSNMAYRDKIS--WNSMIMG 196
++ +++ +Y E+ + M + G ++++Y + I+ W S++
Sbjct: 642 LKIFE-EMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGS 700
Query: 197 LSDHGRASEALTVYETMLEF 216
HG A TV E + +F
Sbjct: 701 CKLHGELELAETVSERLAKF 720
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 209/420 (49%), Gaps = 42/420 (10%)
Query: 9 DYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR------NKIAWTCMI 62
D + L + D S NS+I+GY G L K E+ + I N++ + MI
Sbjct: 82 DVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMI 141
Query: 63 SG-----------------------------------YLSAGQVFKACDLFDSMPDRDSI 87
S Y G + +C LF+ + ++ +
Sbjct: 142 SACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLV 201
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +MI ++QN L + ++ F G P TF + + + + + +HG+
Sbjct: 202 SWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLI 261
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ + + + +L+ +Y+K G ++DS +F + D ++W +M+ + HG +A+
Sbjct: 262 MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+E M+ +G+ PD VTF +L AC+H+GLV++G F +M Y + P DHY +++L
Sbjct: 322 KHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDL 381
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
LGR+G ++DA + +P+EP+ +WGAL+G C + K D + ++A +RL EL+P +
Sbjct: 382 LGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYK-DTQLGTKAAERLFELEPRDGRN 440
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+V L NIY+A+ + + +R M+ KG+ +A GCS+I ++H F GD P E I
Sbjct: 441 YVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKI 500
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 133/281 (47%), Gaps = 8/281 (2%)
Query: 24 DQSLNSMINGYVQAGQLEKAQ----ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFD 79
D +++S+I +E + ++ +V R+ ++ YL G A LFD
Sbjct: 31 DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH--GFSPLNGTFAVLFGAMGSVAYL 137
MP+RD ++W S+ISGY + + + MM GF P TF + A
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
++GR +HG+ +K ++ + N+ ++ Y K G++ S ++F +++ ++ +SWN+MI+
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+G A + L + G PD TFL VL +C G+V + + ++ G
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA-QGIHGLIMFGGFSGN 269
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++++L + G+++D+ V P+ W A++
Sbjct: 270 KCITTALLDLYSKLGRLEDSST-VFHEITSPDSMAWTAMLA 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
L+ + L A+ S ++ R LH VK++ + + LV Y + G + ++F
Sbjct: 30 LDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLF 89
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETML--EFGLYPDTVTFLGVLTACAHAGL 237
M RD +SWNS+I G S G + V M+ E G P+ VTFL +++AC + G
Sbjct: 90 DEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGS 149
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
++G + +V +G+ + IN G+ G + + + L ++ N W ++
Sbjct: 150 KEEG-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMI 207
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 190/351 (54%), Gaps = 13/351 (3%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACD------ 76
D +L+ +++ + LE +++ V IR +I+ I L A V+ C+
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVV-IRTEISKNSHIVSGLIA--VYSECEKMEISE 471
Query: 77 -LFDSMPDRDSIA-WTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGS 133
+FD + IA W SMISG+ N L +A+ LF M P +FA + +
Sbjct: 472 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
+ L GRQ HG+ VK+ Y D +E +L MY KCGEID + + F + ++ + WN M
Sbjct: 532 LCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEM 591
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I G +GR EA+ +Y M+ G PD +TF+ VLTAC+H+GLV+ G E+ +SM +G
Sbjct: 592 IHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG 651
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRA 313
++P DHYI I++ LGRAG+++DAE+ P + + +W L+ C + D +A R
Sbjct: 652 IEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRV-HGDVSLARRV 710
Query: 314 TKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
++L+ LDP ++ +V L N Y++ + + +L+ M V K PG SW
Sbjct: 711 AEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 148/279 (53%), Gaps = 10/279 (3%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N +++ Y++ G + A+++FD + +R+ +W ++ G + +AC++FD MP+RD +
Sbjct: 45 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 104
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +MIS V+ +A+ ++ M+ GF P T A + A V G + HG+
Sbjct: 105 SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA 164
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDD-SYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
VKT + ++ + N+L+SMYAKCG I D R+F +++ +++S+ ++I GL+ + EA
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS----MVNSYGLQPGFDHYI 262
+ ++ M E G+ D+V +L+ A D E++ + ++ L+ GF +
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDL 284
Query: 263 SIIN-LLGRAGKVKD---AEEFVLRLPVEPNHAIWGALV 297
+ N LL K KD AE +P E N W ++
Sbjct: 285 HLNNSLLEIYAKNKDMNGAELIFAEMP-EVNVVSWNIMI 322
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 135/281 (48%), Gaps = 14/281 (4%)
Query: 26 SLNSMINGYVQAGQLEKAQELF----DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
S N MI G+ Q + +K+ E D+ N++ ++ +G V +F S+
Sbjct: 317 SWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
P AW +M+SGY E EAIS F +M P T +V+ + + +L+ G+
Sbjct: 377 PQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGK 436
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDH 200
Q+HG+ ++T + + + L+++Y++C +++ S IF + D WNSMI G +
Sbjct: 437 QIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHN 496
Query: 201 GRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
++AL ++ M + L P+ +F VL++C+ + G + +V S + F
Sbjct: 497 MLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFV 556
Query: 260 HYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALV 297
++ ++ + G++ A +F VLR N IW ++
Sbjct: 557 E-TALTDMYCKCGEIDSARQFFDAVLR----KNTVIWNEMI 592
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 94/181 (51%), Gaps = 9/181 (4%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG------- 129
+F+S+ + +++T++I G + + EA+ +F M G + + +
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 130 --AMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 187
++ + + G+Q+H + ++ + DL L NSL+ +YAK +++ + IF+ M +
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
+SWN MI+G R+ +++ M + G P+ VT + VL AC +G V+ G +F+S
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSS 375
Query: 248 M 248
+
Sbjct: 376 I 376
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 42/214 (19%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK------------ 187
G+ +HG V+ + D L N L+ +Y +CG+ D + ++F M+ RD
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 188 -------------------ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV 228
+SWN+MI L G +AL VY+ M+ G P T V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 229 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRL 284
L+AC+ ++D +F + ++ G D I +++++ + G + D V
Sbjct: 145 LSACSK--VLDG---VFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES 199
Query: 285 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLL 318
+PN + A++G GL++ + + + RL+
Sbjct: 200 LSQPNEVSYTAVIG--GLARENKVLEAVQMFRLM 231
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 197/374 (52%), Gaps = 15/374 (4%)
Query: 25 QSLNSMINGYVQAGQLEKAQEL----FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS 80
++ S+++ + +G ++ + + T + + +I Y + + +A +F++
Sbjct: 263 HTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEA 322
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
M +RD W S++ + ++LF M+ G P T + G +A L QG
Sbjct: 323 MDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQG 382
Query: 141 RQLHGMQV-------KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
R++HG + K+ E+ + NSL+ MY KCG++ D+ +F +M +D SWN M
Sbjct: 383 REIHGYMIVSGLLNRKSSNEF---IHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIM 439
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I G AL ++ M G+ PD +TF+G+L AC+H+G +++G M Y
Sbjct: 440 INGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYN 499
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRA 313
+ P DHY +I++LGRA K+++A E + P+ N +W +++ C L + D+A A
Sbjct: 500 ILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRL-HGNKDLALVA 558
Query: 314 TKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHV 373
KRL EL+P + G+V + N+Y ++ E+ +R MR + V+K PGCSWI++K VH
Sbjct: 559 GKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHT 618
Query: 374 FSSGDRLEPHVEDI 387
F +G++ P + I
Sbjct: 619 FFTGNQTHPEFKSI 632
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 7/242 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRD-SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
+++ Y V A +FD +PDRD S+ W ++++GY Q +A+ +F +M G
Sbjct: 201 LVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGV 260
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T + A +D GR +HG+ VKT D+++ N+L+ MY K ++++ IF
Sbjct: 261 SRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIF 320
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
M RD +WNS++ G L ++E ML G+ PD VT VL C +
Sbjct: 321 EAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLR 380
Query: 240 KGWELFNSMVNSYGL--QPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
+G E+ M+ S GL + + +I S++++ + G ++DA + V+ + A W
Sbjct: 381 QGREIHGYMIVS-GLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK-DSASWNI 438
Query: 296 LV 297
++
Sbjct: 439 MI 440
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 114/224 (50%), Gaps = 8/224 (3%)
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
A T +++ Y G + +A +F +RD + ++ISG+V N +A+ + EM A+G
Sbjct: 98 AGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANG 156
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
P TF L ++ D +++HG+ K ++ D + + LV+ Y+K ++D+
Sbjct: 157 ILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQ 215
Query: 177 RIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
++F + R D + WN+++ G S R +AL V+ M E G+ T VL+A +
Sbjct: 216 KVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVS 275
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDA 277
G +D G + V + G D +S +I++ G++ +++A
Sbjct: 276 GDIDNGRSIHGLAVKT---GSGSDIVVSNALIDMYGKSKWLEEA 316
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 200/351 (56%), Gaps = 10/351 (2%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
S N +I GYV +++ A+ FD +P +N ++W MISGY G V A +LF M +D
Sbjct: 234 SWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKD 293
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHG--FSPLNGTFAVLFGAMGSVAYLDQGRQL 143
+ + +MI+ Y QN +A+ LF +M+ P T + + A + G +
Sbjct: 294 KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV 353
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
+ + D +L SL+ +Y K G+ ++++FSN+ +D +S+++MIMG +G A
Sbjct: 354 ESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMA 413
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+EA +++ M+E + P+ VTF G+L+A +H+GLV +G++ FNSM + L+P DHY
Sbjct: 414 TEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGI 472
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD--ADVASRATKRLLELD 321
++++LGRAG++++A E + +P++PN +WGAL+ GL ++A + LE D
Sbjct: 473 MVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVK-LETD 531
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVH 372
P H+A+ IY++ R + ++R ++ K + K GCSW V+G H
Sbjct: 532 PTGYLSHLAM--IYSSVGRWDDARTVRDSIKEKKLCKTLGCSW--VEGSYH 578
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 151/319 (47%), Gaps = 32/319 (10%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
++ Y + G +E A++ FD + +N ++W ++ GYL +G++ +A +FD +P++D+++W
Sbjct: 145 LVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSW 204
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGFSPLN--GTFAVLFGAMGSV-------AYLDQG 140
+IS Y + + A SLF M PL ++ +L G + Y D
Sbjct: 205 NLIISSYAKKGDMGNACSLFSAM------PLKSPASWNILIGGYVNCREMKLARTYFDAM 258
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
Q +G+ T ++S Y K G++ + +F M+ +DK+ +++MI + +
Sbjct: 259 PQKNGVSWIT-----------MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQN 307
Query: 201 GRASEALTVYETMLEFGLY--PDTVTFLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPG 257
G+ +AL ++ MLE Y PD +T V++A + G G W S + +G++
Sbjct: 308 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTW--VESYITEHGIKID 365
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
S+I+L + G A + L + + + A++ CG++ + S T +
Sbjct: 366 DLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAMI 424
Query: 318 LELDPLNAPGHVALCNIYA 336
+ P N L + Y+
Sbjct: 425 EKKIPPNVVTFTGLLSAYS 443
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 32/282 (11%)
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
DS +W ++ Q+ E + ++ +M G P + + A G + + G+ +H
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+K + ++ LV +Y++ G I+ + + F ++A ++ +SWNS++ G + G
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM---------------V 249
EA V++ + E D V++ ++++ A G + LF++M V
Sbjct: 188 EARRVFDKIPE----KDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV 243
Query: 250 NSYGLQPG---FD--------HYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
N ++ FD +I++I+ + G V+ AEE + RL + + ++ A++
Sbjct: 244 NCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEE-LFRLMSKKDKLVYDAMIA 302
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDR 340
C A + ++LE + P + L ++ +AN +
Sbjct: 303 -CYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ 343
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 172/303 (56%), Gaps = 1/303 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y+ + A LF++ DR+ + WT++ISG+ + E EA LF +M+ P
Sbjct: 252 IIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPN 311
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T A + + S+ L G+ +HG ++ E D + S + MYA+CG I + +F
Sbjct: 312 QCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFD 371
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M R+ ISW+SMI +G EAL + M + P++VTF+ +L+AC+H+G V +
Sbjct: 372 MMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKE 431
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
GW+ F SM YG+ P +HY +++LLGRAG++ +A+ F+ +PV+P + WGAL+ C
Sbjct: 432 GWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ K + D+A ++LL ++P + +V L NIYA + +R++M IKG RK
Sbjct: 492 RIHK-EVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHV 550
Query: 361 GCS 363
G S
Sbjct: 551 GQS 553
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 118/244 (48%), Gaps = 3/244 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y G + A +FD +P R+S+ W ++ GY++ E LF M G +
Sbjct: 150 LVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALD 209
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T L A G+V G+ +HG+ ++ + + L+ S++ MY KC +D++ ++F
Sbjct: 210 ALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF 269
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
R+ + W ++I G + RA EA ++ ML + P+ T +L +C+ G +
Sbjct: 270 ETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLR 329
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
G + M+ + G++ ++ S I++ R G ++ A +P E N W +++
Sbjct: 330 HGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINA 387
Query: 300 CGLS 303
G++
Sbjct: 388 FGIN 391
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 139/305 (45%), Gaps = 52/305 (17%)
Query: 19 LNNFDDQSL--NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACD 76
++ F+D+ + +S+ N Y+Q+ +L+ A F+ +P W
Sbjct: 32 IHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIP-----CW------------------ 68
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELI--AEAISLFGEMMAH--GFSPLNGTFAVLFGAMG 132
R+ +W +++SGY +++ ++ + L+ M H G N FA+ A
Sbjct: 69 ------KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAI--KACV 120
Query: 133 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 192
+ L+ G +HG+ +K + D + SLV MYA+ G ++ + ++F + R+ + W
Sbjct: 121 GLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGV 180
Query: 193 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH--AGLVDK---GWELFNS 247
++ G + + E ++ M + GL D +T + ++ AC + AG V K G + S
Sbjct: 181 LMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRS 240
Query: 248 MVN-SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 306
++ S LQ SII++ + + +A + + V+ N +W L+ G +K +
Sbjct: 241 FIDQSDYLQA------SIIDMYVKCRLLDNARK-LFETSVDRNVVMWTTLIS--GFAKCE 291
Query: 307 ADVAS 311
V +
Sbjct: 292 RAVEA 296
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 52 IRNKIA-----WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAI 106
IRN I +T I Y G + A +FD MP+R+ I+W+SMI+ + N L EA+
Sbjct: 339 IRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEAL 398
Query: 107 SLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG-RQLHGMQVKTIYEYDLILENS---- 161
F +M + P + TF L A + +G +Q M +Y ++ E
Sbjct: 399 DCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMT----RDYGVVPEEEHYAC 454
Query: 162 LVSMYAKCGEIDDSYRIFSNMAYRDKIS-WNSMIMGLSDHGRASEALTVYETMLEFGLYP 220
+V + + GEI ++ NM + S W +++ H A + E +L + P
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLL--SMEP 512
Query: 221 DTVTFLGVLTAC-AHAGLVDKGWELFNSMVNSYGLQPGFDH 260
+ + +L+ A AG+ WE+ N + G++ H
Sbjct: 513 EKSSVYVLLSNIYADAGM----WEMVNCVRRKMGIKGYRKH 549
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 183/330 (55%), Gaps = 2/330 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ AC F + + + ++W+++ISGY Q EA+ F + + S
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 119 PLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
LN T+ +F A +A + G Q+H +K E++L++MY+KCG +DD+
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F +M D ++W + I G + +G ASEAL ++E M+ G+ P++VTF+ VLTAC+HAGL
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
V++G ++M+ Y + P DHY +I++ R+G + +A +F+ +P EP+ W +
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
C K + ++ A + L +LDP + G+V N+Y + E + K M + ++
Sbjct: 564 SGCWTHK-NLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLK 622
Query: 358 KAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
K CSWI KG++H F GD+ P ++I
Sbjct: 623 KELSCSWIQEKGKIHRFIVGDKHHPQTQEI 652
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 140/281 (49%), Gaps = 6/281 (2%)
Query: 60 CMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
C++ Y + A LFD M + ++++ T+MIS Y + ++ +A+ LF M+A G P
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ + L ++ + LD GRQ+H ++ + +E +V+MY KCG + + R+F
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
MA + ++ +++G + GRA +AL ++ ++ G+ D+ F VL ACA ++
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELN 302
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-G 298
G ++ ++ V GL+ +++ + + A + EPN W A++ G
Sbjct: 303 LGKQI-HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISG 360
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVAL---CNIYA 336
C +S+ + V + + R LN+ + ++ C++ A
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLA 401
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 111/242 (45%), Gaps = 7/242 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +++ Y+ G + A +FD M + +A T ++ GY Q +A+ LF +++ G
Sbjct: 223 TGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVE 282
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ F+V+ A S+ L+ G+Q+H K E ++ + LV Y KC + + R
Sbjct: 283 WDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRA 342
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGL 237
F + + +SW+++I G + EA+ ++++ + ++ T+ + AC+
Sbjct: 343 FQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD 402
Query: 238 VDKGWELFNSMVNS--YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
+ G ++ + G Q G ++I + + G + DA E V P+ W A
Sbjct: 403 CNIGGQVHADAIKRSLIGSQYGES---ALITMYSKCGCLDDANE-VFESMDNPDIVAWTA 458
Query: 296 LV 297
+
Sbjct: 459 FI 460
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%), Gaps = 6/223 (2%)
Query: 98 QNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLI 157
++ + EA EM G S + ++ LF A + L GR LH I ++
Sbjct: 60 KHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVL 119
Query: 158 LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG 217
L+N ++ MY +C ++D+ ++F M+ + +S +MI ++ G +A+ ++ ML G
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 218 LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
P + + +L + + +D G ++ ++ + GL I+N+ + G + A
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRA-GLCSNTSIETGIVNMYVKCGWLVGA 238
Query: 278 EEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
+ ++ V+ A G +VG T A A A K ++L
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGY-----TQAGRARDALKLFVDL 276
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 204 bits (520), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 181/329 (55%), Gaps = 1/329 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
+ I T ++ Y + G V A +FD MP RD ++W MI + L +A+S++ M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G + T L + V+ L+ G LH + E + + N+L+ MYAKCG ++
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
++ +F+ M RD ++WNSMI+G HG EA++ + M+ G+ P+ +TFLG+L C+
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
H GLV +G E F M + + L P HY +++L GRAG+++++ E + + +W
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
L+G C + + + ++ A K+L++L+ NA +V + +IY+A + S+RK +R
Sbjct: 381 RTLLGSCKIHR-NLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRS 439
Query: 354 KGVRKAPGCSWILVKGRVHVFSSGDRLEP 382
++ PG SWI + +VH F D++ P
Sbjct: 440 HDLQTVPGWSWIEIGDQVHKFVVDDKMHP 468
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 18/225 (8%)
Query: 25 QSLNSM-----INGYVQAGQLEKAQELFDTVPIRNKIAWTCMIS--GYLSAGQVFKACDL 77
Q NSM I+ +V L+ +F N + C +S G LS Q+ D
Sbjct: 13 QGCNSMKKLRKIHSHVIINGLQHHPSIF------NHLLRFCAVSVTGSLSHAQLLF--DH 64
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAY 136
FDS P W +I G+ + +I + M+ S P TF + +
Sbjct: 65 FDSDPSTSD--WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKS 122
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
+ + ++HG +++ + D I+ SLV Y+ G ++ + ++F M RD +SWN MI
Sbjct: 123 IPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICC 182
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
S G ++AL++Y+ M G+ D+ T + +L++CAH ++ G
Sbjct: 183 FSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG 227
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 185/329 (56%), Gaps = 7/329 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y G + A +FD MP++ +AW S++SG+ QN L EAI +F +M GF P
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ TF L A + G +H + + ++ L +L+++Y++CG++ + +F
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVD 239
M + +W +MI HG +A+ ++ M + G P+ VTF+ VL+ACAHAGLV+
Sbjct: 268 KMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVE 327
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH---AIWGAL 296
+G ++ M SY L PG +H++ ++++LGRAG + +A +F+ +L A+W A+
Sbjct: 328 EGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAM 387
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+G C + + + D+ KRL+ L+P N HV L NIYA + + E++ +R M +
Sbjct: 388 LGACKMHR-NYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNL 446
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVE 385
RK G S I V+ + ++FS GD E H E
Sbjct: 447 RKQVGYSVIEVENKTYMFSMGD--ESHQE 473
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R++ T +I+ SA + LF S+P D + S+I + L ++ + M
Sbjct: 39 RSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRM 98
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
++ SP N TF + + ++ L G+ +H V + + D ++ +LV+ Y+KCG++
Sbjct: 99 LSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDM 158
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+ + ++F M + ++WNS++ G +G A EA+ V+ M E G PD+ TF+ +L+AC
Sbjct: 159 EGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSAC 218
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEP 288
A G V G S V+ Y + G D + ++INL R G V A E ++ E
Sbjct: 219 AQTGAVSLG-----SWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ET 272
Query: 289 NHAIWGALVGVCG 301
N A W A++ G
Sbjct: 273 NVAAWTAMISAYG 285
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GF 117
T +I+ Y G V KA ++FD M + + AWT+MIS Y + +A+ LF +M G
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLI--LEN--SLVSMYAKCGEID 173
P N TF + A +++GR ++ K+ Y LI +E+ +V M + G +D
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS---YRLIPGVEHHVCMVDMLGRAGFLD 363
Query: 174 DSYRIFSNMAYRDKIS----WNSMIMGLSDH 200
++Y+ + K + W +M+ H
Sbjct: 364 EAYKFIHQLDATGKATAPALWTAMLGACKMH 394
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 175/329 (53%), Gaps = 1/329 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ +I Y G F S +D +WTSMI +VQNE + A LF ++ +
Sbjct: 397 SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T +++ A A L G Q+ G +K+ + ++ S +SMYAK G + + ++
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + D ++++MI L+ HG A+EAL ++E+M G+ P+ FLGVL AC H GLV
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+G + F M N Y + P H+ +++LLGR G++ DAE +L + + W AL+
Sbjct: 577 TQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C + K D+ + R +RL+EL+P + +V L NIY + + +R+ MR +GV+K
Sbjct: 637 SCRVYK-DSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKK 695
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDI 387
P SWI++ + H F+ D P + I
Sbjct: 696 EPALSWIVIGNQTHSFAVADLSHPSSQMI 724
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 14/255 (5%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A LFD MP+R+ I++ S+ISGY Q +A+ LF E T+A G G
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSM 193
LD G LHG+ V + L N L+ MY+KCG++D + +F RD++SWNS+
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA---HAGLVDKGWELFNSMVN 250
I G G A E L + M GL T VL AC + G ++KG ++
Sbjct: 221 ISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA-----IH 275
Query: 251 SYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCGLSKT 305
Y + G + I +++++ + G +K+A + +P N + A++ G + +
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISGFLQMDEI 334
Query: 306 DADVASRATKRLLEL 320
+ +S A K +++
Sbjct: 335 TDEASSEAFKLFMDM 349
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 124/251 (49%), Gaps = 15/251 (5%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ-----NELIAEAISLFG 110
+ T ++ Y G + +A LF MP ++ + + +MISG++Q +E +EA LF
Sbjct: 288 VVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFM 347
Query: 111 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 170
+M G P TF+V+ A + L+ GRQ+H + K ++ D + ++L+ +YA G
Sbjct: 348 DMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMG 407
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
+D + F++ + +D SW SMI + + A ++ + + P+ T +++
Sbjct: 408 STEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMS 467
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPV 286
ACA + G + + Y ++ G D + S+ I++ ++G + A + + +
Sbjct: 468 ACADFAALSSGEQ-----IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ- 521
Query: 287 EPNHAIWGALV 297
P+ A + A++
Sbjct: 522 NPDVATYSAMI 532
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
+ +LF + G+ HG +K+ L L N+L++MY KC E+ + ++F M
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
R+ IS+NS+I G + G +A+ ++ E L D T+ G L C +D G E
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-E 168
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
L + +V GL +I++ + GK+ A R E + W +L+
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLI 221
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 189/335 (56%), Gaps = 12/335 (3%)
Query: 31 INGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWT 90
I+GY ++K +L + +++ Y G + A ++D +P+ D ++ +
Sbjct: 573 IHGYTLRAGIDKGMDL-----------GSALVNMYSKCGSLKLARQVYDRLPELDPVSCS 621
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 150
S+ISGY Q+ LI + LF +M+ GF+ + + + A G Q+H K
Sbjct: 622 SLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKI 681
Query: 151 IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY 210
+ + +SL++MY+K G IDD + FS + D I+W ++I + HG+A+EAL VY
Sbjct: 682 GLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVY 741
Query: 211 ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGR 270
M E G PD VTF+GVL+AC+H GLV++ + NSMV YG++P HY+ +++ LGR
Sbjct: 742 NLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGR 801
Query: 271 AGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVA 330
+G++++AE F+ + ++P+ +WG L+ C + + ++ A K+ +EL+P +A +++
Sbjct: 802 SGRLREAESFINNMHIKPDALVWGTLLAACKI-HGEVELGKVAAKKAIELEPSDAGAYIS 860
Query: 331 LCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
L NI A E+ RK M+ GV+K PG S +
Sbjct: 861 LSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 121/227 (53%), Gaps = 7/227 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPD--RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+IS Y +G + + +F+ + D R +I MI+ + Q++ +AI LF M+ G
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ L + L+ G+Q+HG +K+ DL + +SL ++Y+KCG +++SY++
Sbjct: 451 TDEFSVCSLLSVLDC---LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + ++D W SMI G +++G EA+ ++ ML+ G PD T VLT C+ +
Sbjct: 508 FQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSL 567
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP 285
+G E+ + + G+ G D +++N+ + G +K A + RLP
Sbjct: 568 PRGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 149/335 (44%), Gaps = 40/335 (11%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSL-NSMINGYVQAGQLEKAQELF------------ 47
MYS G +D + E +L++ Q++ N MI + Q+ + KA LF
Sbjct: 395 MYSKSGDIDLSEQVFE-DLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDE 453
Query: 48 ----------DTVPIRNKIAWTCMISG--------------YLSAGQVFKACDLFDSMPD 83
D + + ++ + SG Y G + ++ LF +P
Sbjct: 454 FSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
+D+ W SMISG+ + + EAI LF EM+ G SP T A + S L +G+++
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
HG ++ + + L ++LV+MY+KCG + + +++ + D +S +S+I G S HG
Sbjct: 574 HGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLI 633
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+ ++ M+ G D+ +L A A + G ++ ++ + GL S
Sbjct: 634 QDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQV-HAYITKIGLCTEPSVGSS 692
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++ + + G + D + ++ P+ W AL+
Sbjct: 693 LLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIA 726
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 12/243 (4%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G + +A ++F +P+ ++WT M+SGY ++ A+ +F EM G
Sbjct: 289 TAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVE 348
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
N T + A G + + + Q+H K+ + D + +L+SMY+K G+ID S ++
Sbjct: 349 INNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQV 408
Query: 179 FSNM--AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA--CAH 234
F ++ R I N MI S + +A+ ++ ML+ GL D + +L+ C +
Sbjct: 409 FEDLDDIQRQNIV-NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLN 467
Query: 235 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
G G+ L + +V L G S+ L + G ++++ + +P + N A W
Sbjct: 468 LGKQVHGYTLKSGLV--LDLTVG----SSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWA 520
Query: 295 ALV 297
+++
Sbjct: 521 SMI 523
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 135/289 (46%), Gaps = 15/289 (5%)
Query: 22 FDDQSLNSMIN----GYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDL 77
F+DQS + + N +QA L + FD ++ ++W Y ++G + A L
Sbjct: 53 FNDQSNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSW------YSNSGSMADAAKL 106
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
FD++P D ++ MISGY Q+ L E++ F +M GF ++ + A ++
Sbjct: 107 FDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAP 166
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
+ +K Y + ++E++L+ +++K +D+Y++F + + WN++I G
Sbjct: 167 LFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGA 226
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+ ++ M PD+ T+ VL ACA + G ++ + V G +
Sbjct: 227 LRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFG-KVVQARVIKCGAEDV 285
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 306
F +I++L + G + +A E R+P P+ W ++ G +K++
Sbjct: 286 F-VCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVMLS--GYTKSN 330
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 84 RDSIA-----WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
RDS++ W ++I+G ++N+ LF EM P + T++ + A S+ L
Sbjct: 209 RDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLR 268
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
G+ + +K E D+ + ++V +YAKCG + ++ +FS + +SW M+ G +
Sbjct: 269 FGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYT 327
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
A AL +++ M G+ + T V++AC +V + S V+++ + GF
Sbjct: 328 KSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA-----SQVHAWVFKSGF 382
Query: 259 --DHYI--SIINLLGRAGKVKDAEE 279
D + ++I++ ++G + +E+
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQ 407
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 183/343 (53%), Gaps = 13/343 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y S G + A +FD MP+R ++W SMI V+ A+ LF EM F P
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPD 250
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI---YEYDLILENSLVSMYAKCGEIDDSYR 177
T + A + L G H ++ D++++NSL+ MY KCG + + +
Sbjct: 251 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 310
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF--GLYPDTVTFLGVLTACAHA 235
+F M RD SWN+MI+G + HGRA EA+ ++ M++ + P++VTF+G+L AC H
Sbjct: 311 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 370
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
G V+KG + F+ MV Y ++P +HY I++L+ RAG + +A + V+ +P++P+ IW +
Sbjct: 371 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 430
Query: 296 LVGVCGLSKTDADVASRATKRLL------ELDPLNAPG-HVALCNIYAANDRHIELTSLR 348
L+ C +++ + ++ E N G +V L +YA+ R ++ +R
Sbjct: 431 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR 490
Query: 349 KEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
K M G+RK PGCS I + G H F +GD P + I Q+
Sbjct: 491 KLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQL 533
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 6/225 (2%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQN-ELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSV 134
+FDS+ + S W ++I + EA L+ +M+ G SP TF + A +
Sbjct: 105 VFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYI 164
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
+G+Q+H VK + D+ + N L+ +Y CG +D + ++F M R +SWNSMI
Sbjct: 165 FGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMI 224
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
L G AL ++ M + PD T VL+ACA G + G ++ +
Sbjct: 225 DALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDV 283
Query: 255 QPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
D + S+I + + G ++ AE+ V + + + A W A++
Sbjct: 284 DVAMDVLVKNSLIEMYCKCGSLRMAEQ-VFQGMQKRDLASWNAMI 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYD---LILENSLVSMYAKCGEIDDSYRIFSNMA 183
+F + + + Q +QLH ++T Y + L L ++ + + +++ ++R+F ++
Sbjct: 51 IFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 184 YRDKISWNSMIMGLS-DHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKG 241
WN++I + D R EA +Y MLE G PD TF VL ACA+ +G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 242 WELFNSMVNSYGLQPGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
++ +V +G G D Y++ +I+L G G + A + +P E + W +++
Sbjct: 171 KQVHCQIVK-HGF--GGDVYVNNGLIHLYGSCGCLDLARKVFDEMP-ERSLVSWNSMI 224
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 183/346 (52%), Gaps = 6/346 (1%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
+LN++I Y ++ A +LFD P R+ + + +I G + A ++ +A +LFDSMP RD
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRD 213
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
++W S+ISGY Q EAI LF EM+A G P N A +G+ +H
Sbjct: 214 LVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHD 273
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+ D L LV YAKCG ID + IF + + +WN+MI GL+ HG
Sbjct: 274 YTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGEL 333
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISII 265
+ + M+ G+ PD VTF+ VL C+H+GLVD+ LF+ M + Y + HY +
Sbjct: 334 TVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMA 393
Query: 266 NLLGRAGKVKDAEEFVLRLPVEPNHA----IWGALVGVCGLSKTDADVASRATKRLLELD 321
+LLGRAG +++A E + ++P + + W L+G C + + ++A +A R+ L
Sbjct: 394 DLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRI-HGNIEIAEKAANRVKALS 452
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEM-RIKGVRKAPGCSWIL 366
P + + + +YA +R E+ +R+ + R K V+K G S +L
Sbjct: 453 PEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKVL 498
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 200/369 (54%), Gaps = 8/369 (2%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC----MISGYLSAGQVFKACDLF 78
D+ ++ ++++ G L+ EL I++ +I+ Y + KA D+F
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
++P ++ I+WTS+I+G N EA+ +F M P T A + L
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALM 515
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
G+++H ++T D L N+L+ MY +CG ++ ++ F N +D SWN ++ G S
Sbjct: 516 CGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYS 574
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
+ G+ S + +++ M++ + PD +TF+ +L C+ + +V +G F+ M YG+ P
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNL 633
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLL 318
HY +++LLGRAG++++A +F+ ++PV P+ A+WGAL+ C + D+ + + +
Sbjct: 634 KHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHK-IDLGELSAQHIF 692
Query: 319 ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
ELD + ++ LCN+YA + E+ +R+ M+ G+ GCSW+ VKG+VH F S D
Sbjct: 693 ELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDD 752
Query: 379 RLEPHVEDI 387
+ P ++I
Sbjct: 753 KYHPQTKEI 761
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 15/225 (6%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y+ G V A LFD MP RD I+W +MISGY +N + E + LF M P
Sbjct: 237 LITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPD 296
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + A + GR +H + T + D+ + NSL MY G ++ ++FS
Sbjct: 297 LMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS 356
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M +D +SW +MI G + +A+ Y M + + PD +T VL+ACA G +D
Sbjct: 357 RMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 241 GWELF---------------NSMVNSYGLQPGFDHYISIINLLGR 270
G EL N+++N Y D + I + + R
Sbjct: 417 GVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR 461
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 10/225 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGT 123
++ G + A +F M +R+ +W ++ GY + EA+ L+ M+ G P T
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
F + G + L +G+++H V+ YE D+ + N+L++MY KCG++ + +F M
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
RD ISWN+MI G ++G E L ++ M + PD +T V++AC G G +
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGR----AGKVKDAEEFVLRL 284
+++Y + GF IS+ N L + AG ++AE+ R+
Sbjct: 319 -----IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 3/206 (1%)
Query: 93 ISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIY 152
+ G N + EA+ L M + F L ++G +++ + + ++
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 153 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 212
+ L N+ ++M+ + G + D++ +F M+ R+ SWN ++ G + G EA+ +Y
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 213 MLEF-GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA 271
ML G+ PD TF VL C + +G E+ +V YG + D ++I + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVKC 244
Query: 272 GKVKDAEEFVLRLPVEPNHAIWGALV 297
G VK A R+P + W A++
Sbjct: 245 GDVKSARLLFDRMP-RRDIISWNAMI 269
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 191/360 (53%), Gaps = 33/360 (9%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIA 88
S+I+ Y + G+ A+ +F +W MIS Y+S G FK
Sbjct: 349 SLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFK--------------- 393
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
A+ ++ +M++ G P TF + A +A L++G+Q+H
Sbjct: 394 ----------------AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
++ E D +L ++L+ MY+KCG +++RIF+++ +D +SW MI HG+ EAL
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
++ M +FGL PD VT L VL+AC HAGL+D+G + F+ M + YG++P +HY +I++L
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 269 GRAGKVKDAEEFVLRLPVEPNHA-IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
GRAG++ +A E + + P ++A + L C L + + R + L+E P +A
Sbjct: 558 GRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCL-HLEHSLGDRIARLLVENYPDDAST 616
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
++ L N+YA+ + +R +M+ G+RK PGCSWI + +V F + DR E++
Sbjct: 617 YMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENV 676
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 47/334 (14%)
Query: 13 NALEGNLNNFDDQ------SLNSMINGYVQAGQLEKAQELFD--------------TVPI 52
N E +L FD+ S N++I+ + Q+G+ EKA ELF TV I
Sbjct: 156 NLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAI 215
Query: 53 R--NKIAW---------TCMISG-----YLSAGQV--FKACD-------LFDSMPDRDSI 87
+++ W C+ G Y+++ V + CD +F MP + +
Sbjct: 216 SACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLV 275
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
AW SMI GYV + + M+ G P T + A L G+ +HG
Sbjct: 276 AWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYV 335
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
++++ D+ + SL+ +Y KCGE + + +FS SWN MI G +A+
Sbjct: 336 IRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAV 395
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
VY+ M+ G+ PD VTF VL AC+ ++KG ++ S+ S L+ +++++
Sbjct: 396 EVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR-LETDELLLSALLDM 454
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCG 301
+ G K+A +P + + W ++ G
Sbjct: 455 YSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYG 487
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 127/251 (50%), Gaps = 12/251 (4%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDR-DSIAWTSMISGYVQNELIAEAISLFGE 111
R+ + +I+ Y + A +F++ R D W S++SGY +N + + + +F
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 112 MMAHGFS-PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 170
++ P + TF + A G++ GR +H + VK+ Y D+++ +SLV MYAK
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
++S ++F M RD SWN++I G A +AL ++ M G P++V+ ++
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDAEEFVLRLPV 286
AC+ +++G E+ V + GF D Y+ +++++ G+ ++ A E ++P
Sbjct: 217 ACSRLLWLERGKEIHRKCV-----KKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP- 270
Query: 287 EPNHAIWGALV 297
+ W +++
Sbjct: 271 RKSLVAWNSMI 281
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D + S++ Q LEK +++ ++ +++ + ++ Y G +A +F
Sbjct: 409 DVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+S+P +D ++WT MIS Y + EA+ F EM G P T + A G +D
Sbjct: 469 NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 528
Query: 139 QGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGEIDDSYRI 178
+G + Q+++ Y + I+E+ ++ + + G + ++Y I
Sbjct: 529 EGLKFFS-QMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEI 569
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 185/331 (55%), Gaps = 1/331 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + A F+ MP++ ++AW ++I+GY + EA+ L +M G S
Sbjct: 265 LIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSID 324
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T +++ +A L+ +Q H ++ +E +++ +LV Y+K G +D + +F
Sbjct: 325 QFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFD 384
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ ++ ISWN+++ G ++HGR ++A+ ++E M+ + P+ VTFL VL+ACA++GL ++
Sbjct: 385 KLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQ 444
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
GWE+F SM +G++P HY +I LLGR G + +A F+ R P++ +W AL+ C
Sbjct: 445 GWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNAC 504
Query: 301 GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAP 360
+ + + ++ ++L + P +V + N+Y + + E + + + KG+ P
Sbjct: 505 RMQE-NLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMP 563
Query: 361 GCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
C+W+ V + H F SGDR + + E + QI
Sbjct: 564 ACTWVEVGDQTHSFLSGDRFDSYNETVKRQI 594
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 128/285 (44%), Gaps = 29/285 (10%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
++ G + A LFD +P+R+ ++ S+ISG+V EA LF M TF
Sbjct: 168 HVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTF 227
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
AV+ A + + G+QLH +K + + L+ MY+KCG+I+D+ F M
Sbjct: 228 AVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPE 287
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV-----------LTACA 233
+ ++WN++I G + HG + EAL + M + G+ D T + LT A
Sbjct: 288 KTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQA 347
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
HA L+ G+E + +V + L ++ + G+V A +LP N W
Sbjct: 348 HASLIRNGFE--SEIVANTAL----------VDFYSKWGRVDTARYVFDKLP-RKNIISW 394
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLN-APGHVALCNIYAA 337
AL+G + + A K ++ N AP HV + +A
Sbjct: 395 NALMG----GYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSA 435
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGFSPLNGTFAVLFGAMGSVA 135
L D+ + + S I V EA LF + + F T+ L A +
Sbjct: 78 LDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLK 137
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+ ++++G + +E + + N ++ M+ KCG I D+ R+F + R+ S+ S+I
Sbjct: 138 SIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIIS 197
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G + G EA +++ M E +T TF +L A A G + G +L V + L
Sbjct: 198 GFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLH---VCALKLG 254
Query: 256 PGFDHYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ ++S +I++ + G ++DA +P E W ++
Sbjct: 255 VVDNTFVSCGLIDMYSKCGDIEDARCAFECMP-EKTTVAWNNVIA 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNK-----IAWTCMISGYLSAGQVFKAC 75
+ D +L+ MI + +LE ++ ++ IRN +A T ++ Y G+V A
Sbjct: 322 SIDQFTLSIMIRISTKLAKLELTKQAHASL-IRNGFESEIVANTALVDFYSKWGRVDTAR 380
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+FD +P ++ I+W +++ GY + +A+ LF +M+A +P + TF + A
Sbjct: 381 YVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSG 440
Query: 136 YLDQG-------RQLHGMQVKTIYEYDLILE 159
+QG ++HG++ + ++ Y ++E
Sbjct: 441 LSEQGWEIFLSMSEVHGIKPRAMH-YACMIE 470
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 191/354 (53%), Gaps = 5/354 (1%)
Query: 38 GQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYV 97
G L+ ++F + + + T ++ Y + AC +FD +P RD+++W + S Y+
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 98 QNELIAEAISLFGEMM--AHGFSPLNGTFAVL-FGAMGSVAYLDQGRQLHGMQVKTIYEY 154
+N+ + + LF +M G +G +L A ++ LD G+Q+H +
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 155 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 214
L L N+LVSMY++CG +D +Y++F M R+ +SW ++I GL+ +G EA+ + ML
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML 310
Query: 215 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN-SYGLQPGFDHYISIINLLGRAGK 273
+FG+ P+ T G+L+AC+H+GLV +G F+ M + + ++P HY +++LLGRA
Sbjct: 311 KFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARL 370
Query: 274 VKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 333
+ A + + ++P+ IW L+G C + D ++ R L+EL A +V L N
Sbjct: 371 LDKAYSLIKSMEMKPDSTIWRTLLGACRV-HGDVELGERVISHLIELKAEEAGDYVLLLN 429
Query: 334 IYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
Y+ + ++T LR M+ K + PGCS I ++G VH F D P E+I
Sbjct: 430 TYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEI 483
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 178/328 (54%), Gaps = 13/328 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIA-WTSMISGYVQNELIAEAISLFGEMMAHGF 117
T ++ Y S G V A +FD P++ +I WT+MIS Y +NE EAI LF M A
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY--DLILENSLVSMYAKCGEIDDS 175
V A + + G +++ +K DL L NSL++MY K GE + +
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG------LYPDTVTFLGVL 229
++F +D ++ SMI G + +G+A E+L +++ M + P+ VTF+GVL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 289
AC+H+GLV++G F SM+ Y L+P H+ +++L R+G +KDA EF+ ++P++PN
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 290 HAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRK 349
IW L+G C L + ++ +R+ ELD + +VAL NIYA+ E + +R
Sbjct: 344 TVIWRTLLGACSLH-GNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRD 402
Query: 350 EMRIKGVRKAPGCSWILVKGRVHVFSSG 377
+R R+ PG SWI + ++ F SG
Sbjct: 403 RVR---KRRMPGKSWIELGSIINEFVSG 427
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 81/164 (49%), Gaps = 7/164 (4%)
Query: 123 TFAVLFGAMGSVAY----LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+F+VLF S A LD GRQ+H + K + + ++ SLV Y+ G++D + ++
Sbjct: 64 SFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 179 FSNMAYRDKIS-WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
F + I W +MI +++ + EA+ +++ M + D V L+ACA G
Sbjct: 123 FDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGA 182
Query: 238 VDKGWELFN-SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
V G E+++ S+ L S++N+ ++G+ + A +
Sbjct: 183 VQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKL 226
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 179/311 (57%), Gaps = 2/311 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N I T +I Y G + A LFD MP+R ++W S+I+GY QN EA+ +F +M+
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G +P TF + A G+ +H KT + D + +LV+MYAK G+ +
Sbjct: 310 DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAE 369
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTAC 232
+ + F ++ +D I+W +I+GL+ HG +EAL++++ M E G PD +T+LGVL AC
Sbjct: 370 SAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYAC 429
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
+H GLV++G F M + +GL+P +HY ++++L RAG+ ++AE V +PV+PN I
Sbjct: 430 SHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNI 489
Query: 293 WGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMR 352
WGAL+ C + + + ++ R + E + L + +V L NIYA R ++ +R+ M+
Sbjct: 490 WGALLNGCDIHE-NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMK 548
Query: 353 IKGVRKAPGCS 363
K V K G S
Sbjct: 549 SKRVDKVLGHS 559
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 117/229 (51%), Gaps = 9/229 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
TC++ Y+ G+V +F+ +P + +AW S+ISG+V N ++AI F EM ++G
Sbjct: 146 TCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVK 205
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGM--------QVKTIYEYDLILENSLVSMYAKCG 170
L A G + G+ HG ++ +++IL SL+ MYAKCG
Sbjct: 206 ANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCG 265
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
++ + +F M R +SWNS+I G S +G A EAL ++ ML+ G+ PD VTFL V+
Sbjct: 266 DLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIR 325
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
A G G + ++ V+ G +++N+ + G + A++
Sbjct: 326 ASMIQGCSQLGQSI-HAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKK 373
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 17/270 (6%)
Query: 38 GQLEKAQELFDTVPIRNKIAW--TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISG 95
G + K+ + + +P+ I + TC + LS + +F+S+ W SMI G
Sbjct: 27 GLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYAR-----SVFESIDCPSVYIWNSMIRG 81
Query: 96 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 155
Y + +A+ + EM+ G+SP TF + A + + G +HG VKT +E +
Sbjct: 82 YSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVN 141
Query: 156 LILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE 215
+ + L+ MY CGE++ R+F ++ + ++W S+I G ++ R S+A+ + M
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQS 201
Query: 216 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--------SIINL 267
G+ + + +L AC + G + F+ + G P F + S+I++
Sbjct: 202 NGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDPYFQSKVGFNVILATSLIDM 260
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ G ++ A +P E W +++
Sbjct: 261 YAKCGDLRTARYLFDGMP-ERTLVSWNSII 289
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGE-IDDSY--RIFSNMAYRDKISWNSMIMGLS 198
QLHG+ +K+ ++I + L+ C E ++ SY +F ++ WNSMI G S
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
+ +AL Y+ ML G PD TF VL AC +GL D F S V+ + ++ GF
Sbjct: 84 NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKAC--SGLRDIQ---FGSCVHGFVVKTGF 138
Query: 259 D--HYIS--IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ Y+S ++++ G+V +P + N WG+L+
Sbjct: 139 EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGSLI 180
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 183/333 (54%), Gaps = 11/333 (3%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y+ + A +FD +P D + W +++GYV+ L +E + +F EM+ G P +
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 125 AVLFGAMGSVAYLDQGRQLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
A V L QG+ +H ++ K+ E D+ + +LV MYAKCG I+ + +F +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGW 242
R+ SW ++I G + +G A +A+T E + E G+ PD+V LGVL ACAH G +++G
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 243 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
+ +M Y + P +HY I++L+ RAG++ DA + ++P++P ++WGAL+ C
Sbjct: 342 SMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRT 401
Query: 303 SKTDADVASRATKRLLELDPLNAPGH----VALCNIYAANDRHIELTSLRKEMRIKGVRK 358
K + ++ A K LL+L+ N V L NIY + R+ E + +R + +GVRK
Sbjct: 402 HK-NVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRK 460
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
PG S + V G V F SGD P+ LLQI
Sbjct: 461 TPGWSVLEVDGNVTKFVSGDVSHPN----LLQI 489
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 9/254 (3%)
Query: 53 RNKIAWTCMISGYLSAGQVFK----ACDLFDSMPDRDSIAWTSMI---SGYVQNELIAEA 105
RN A + +++ +L + K A +FDS+ +S + +MI S Q L
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT-IYEYDLILENSLVS 164
L + +P TF L A + G+Q+H VK ++ D ++ ++
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 224
+Y + + D+ ++F + D + W+ ++ G G SE L V+ ML GL PD +
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFS 220
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
LTACA G + +G + + ++ +++++ + G ++ A E +L
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL 280
Query: 285 PVEPNHAIWGALVG 298
N W AL+G
Sbjct: 281 -TRRNVFSWAALIG 293
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 179/311 (57%), Gaps = 2/311 (0%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 115
I + ++ + + G + A LF +P++D IA++ +I G V++ + A LF E++
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 116 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
G + + S+A L G+Q+HG+ +K YE + + +LV MY KCGEID+
Sbjct: 438 GLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNG 497
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
+F M RD +SW +I+G +GR EA + M+ G+ P+ VTFLG+L+AC H+
Sbjct: 498 VVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHS 557
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
GL+++ +M + YGL+P +HY +++LLG+AG ++A E + ++P+EP+ IW +
Sbjct: 558 GLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTS 617
Query: 296 LVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 355
L+ CG K +A + + ++LL+ P + + +L N YA +L+ +R+ + G
Sbjct: 618 LLTACGTHK-NAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG 676
Query: 356 VRKAPGCSWIL 366
+++ G SWI+
Sbjct: 677 AKES-GMSWII 686
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 15/280 (5%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
+NS+++ YV+ G+L +A F + + +W +ISGY AG + +A LF MP +
Sbjct: 145 MNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNV 204
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAH-----GFSPLNGTFAVLFGAMGSVAYLDQGR 141
++W +ISG+V ++ A+ M GF+ G A FG + L G+
Sbjct: 205 VSWNCLISGFV-DKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGL-----LTMGK 258
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF--SNMAYRDKIS-WNSMIMGLS 198
QLH VK+ E ++L+ MY+ CG + + +F +A ++ WNSM+ G
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
+ AL + + + L D+ T G L C + + G ++ +S+V G + +
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV-HSLVVVSGYELDY 377
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+++L G ++DA + RLP + A G + G
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRG 417
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 125/282 (44%), Gaps = 23/282 (8%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I+ YV L A ++FD + RN + WT M+SGY S G+ KA +L+ M D +
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAH-------GFSPLNGTFAVLFGAMGSVA--YLD 138
A + V +A L G++ G L G + M SV Y+
Sbjct: 104 AANEFMYSAV-----LKACGLVGDIQLGILVYERIGKENLRGDVVL----MNSVVDMYVK 154
Query: 139 QGRQLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
GR + K I N+L+S Y K G +D++ +F M + +SWN +I G
Sbjct: 155 NGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGF 214
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
D G + AL M GL D L AC+ GL+ G +L +V S GL+
Sbjct: 215 VDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKS-GLESS 272
Query: 258 FDHYISIINLLGRAGKVKDAEEFV--LRLPVEPNHAIWGALV 297
++I++ G + A + +L V + A+W +++
Sbjct: 273 PFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 36/280 (12%)
Query: 57 AWTCMISGYLSAGQVFKACDLF--DSMPDRDSIA-WTSMISGYVQNELIAEAISLFGEMM 113
A + +I Y + G + A D+F + + S+A W SM+SG++ NE A+ L ++
Sbjct: 275 AISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIY 334
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
+ T + + L G Q+H + V + YE D I+ + LV ++A G I
Sbjct: 335 QSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQ 394
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
D++++F + +D I+++ +I G G S A ++ +++ GL D +L C+
Sbjct: 395 DAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCS 454
Query: 234 -----------HAGLVDKGWE--------LFNSMVNSYGLQPG---FD--------HYIS 263
H + KG+E L + V + G FD +
Sbjct: 455 SLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTG 514
Query: 264 IINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALVGVC 300
II G+ G+V++A + ++ + +EPN + L+ C
Sbjct: 515 IIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSAC 554
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 34/235 (14%)
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
G V +G + +K ++ + N+++SMY + D++++F M+ R+ ++W
Sbjct: 16 GKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWT 75
Query: 192 SMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKG---WE---- 243
+M+ G + G+ ++A+ +Y ML+ + + VL AC G + G +E
Sbjct: 76 TMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGK 135
Query: 244 --------LFNSMVNSYG---------------LQPGFDHYISIINLLGRAGKVKDAEEF 280
L NS+V+ Y L+P + ++I+ +AG + +A
Sbjct: 136 ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTL 195
Query: 281 VLRLPVEPNHAIWGALVG--VCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 333
R+P +PN W L+ V S + R + L LD P + C+
Sbjct: 196 FHRMP-QPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACS 249
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 183/333 (54%), Gaps = 11/333 (3%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y+ +F A +FD +P D + W +++GYV+ L +E + +F EM+ G P +
Sbjct: 162 YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSV 221
Query: 125 AVLFGAMGSVAYLDQGRQLHG-MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
A V L QG+ +H ++ K E D+ + +LV MYAKCG I+ + +F +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT 281
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVDKGW 242
R+ SW ++I G + +G A +A T + + E G+ PD+V LGVL ACAH G +++G
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 243 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
+ +M YG+ P +HY I++L+ RAG++ DA + + ++P++P ++WGAL+ C
Sbjct: 342 TMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRT 401
Query: 303 SKTDADVASRATKRLLELDPLNAPGH----VALCNIYAANDRHIELTSLRKEMRIKGVRK 358
K + ++ A + LL+L+ N V L NIY + R+ E +R + +G+RK
Sbjct: 402 HK-NVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRK 460
Query: 359 APGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
PG S + V G V F SGD P+ LLQI
Sbjct: 461 TPGWSLLEVDGIVTKFVSGDVSHPN----LLQI 489
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 9/254 (3%)
Query: 53 RNKIAWTCMISGYLSAGQVFK----ACDLFDSMPDRDSIAWTSMI---SGYVQNELIAEA 105
RN A + +++ +L + K A +FDS+ +S + +MI S Q L
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT-IYEYDLILENSLVS 164
L + +P TF L A + G+Q+H VK ++ D ++ ++
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 165 MYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 224
+Y + + D+ ++F + D + W+ ++ G G SE L V++ ML G+ PD +
Sbjct: 161 IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFS 220
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
LTACA G + +G + + ++ +++++ + G ++ A E +L
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 285 PVEPNHAIWGALVG 298
N W AL+G
Sbjct: 281 -TRRNVFSWAALIG 293
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 183/336 (54%), Gaps = 11/336 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G + A LFD MP RD +W ++I+G V +EA+ L+ M G
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQL-HGMQVKTIYEYD-LILENSLVSMYAKCGEIDDSY 176
T GA + + +G + HG Y D +I+ N+ + MY+KCG +D +Y
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHG------YSNDNVIVSNAAIDMYSKCGFVDKAY 261
Query: 177 RIFSNMAYRDKI-SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
++F + + +WN+MI G + HG A AL +++ + + G+ PD V++L LTAC HA
Sbjct: 262 QVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHA 321
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
GLV+ G +FN+M G++ HY +++LL RAG++++A + + + + P+ +W +
Sbjct: 322 GLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQS 380
Query: 296 LVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 355
L+G + +D ++A A++ + E+ N V L N+YAA R ++ +R +M K
Sbjct: 381 LLGASEIY-SDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQ 439
Query: 356 VRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
V+K PG S+I KG +H F + D+ +I +I
Sbjct: 440 VKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKI 475
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 126/286 (44%), Gaps = 26/286 (9%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVP------IRNKIAWTCMISGYLSAGQVFKACDLFDS 80
+ +MI V Q+++ Q F T +R+++ C IS + G + A +F
Sbjct: 6 METMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPF---GDLSFAVQIFRY 62
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG--------FSPLNGTFAVLFGAMG 132
+P + W ++I G+ + + A S + M+ L +F + A
Sbjct: 63 IPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARA 122
Query: 133 -SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
+ +DQ LH + D +L +L+ Y+K G++ +Y++F M RD SWN
Sbjct: 123 LCSSAMDQ---LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWN 179
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
++I GL RASEA+ +Y+ M G+ VT + L AC+H G V +G +F+ N
Sbjct: 180 ALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND 239
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ + I++ + G V A + + + + W ++
Sbjct: 240 NVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 182/344 (52%), Gaps = 7/344 (2%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLF---DSMPDRD 85
++++ Y + + A++LFD +P RN + W MIS Y G+V +A +L+ D MP+
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 86 SIAWTSMISGYVQNELIA-EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
S + ++I G V E + AI + +M+ F P T L A ++ +++H
Sbjct: 148 S--FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIH 205
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
+ + E L++ LV Y +CG I +F +M RD ++W+S+I + HG A
Sbjct: 206 SYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAE 265
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
AL ++ M + PD + FL VL AC+HAGL D+ F M YGL+ DHY +
Sbjct: 266 SALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCL 325
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
+++L R G+ ++A + + +P +P WGAL+G C + + ++A A + LL ++P N
Sbjct: 326 VDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACR-NYGEIELAEIAARELLMVEPEN 384
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK 368
+V L IY + R E LR +M+ GV+ +PG SW L K
Sbjct: 385 PANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSWCLFK 428
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 22/228 (9%)
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQGRQLHG 145
I+ T +S Y +A++LF +M + PL+ F++ + + G +H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
VK+ + + + +L+ MY KC + + ++F + R+ + WN+MI + G+ E
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD------KGWELFNSMVNSYGLQPGFD 259
A+ +YE M + P+ +F ++ GLV + E + M+ + +P
Sbjct: 133 AVELYEAM---DVMPNESSFNAIIK-----GLVGTEDGSYRAIEFYRKMIE-FRFKPNLI 183
Query: 260 HYISIINLLGRAGK---VKDAEEFVLRLPVEPNHAIWGALV---GVCG 301
+++++ G +K+ + R +EP+ + LV G CG
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCG 231
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 185/344 (53%), Gaps = 10/344 (2%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPI----RNKI 56
MYS FG + A +L D N+MI+GY Q ++A L + + + I
Sbjct: 161 MYSKFGEVGNARKVF-SDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVI 219
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMP----DRDSIAWTSMISGYVQNELIAEAISLFGEM 112
W +ISG+ K ++ + M D ++WTS+ISG V N +A F +M
Sbjct: 220 TWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQM 279
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ HG P + T L A ++AY+ G+++HG V T E + ++L+ MY KCG I
Sbjct: 280 LTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFI 339
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
++ +F + +++NSMI ++HG A +A+ +++ M G D +TF +LTAC
Sbjct: 340 SEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTAC 399
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
+HAGL D G LF M N Y + P +HY +++LLGRAGK+ +A E + + +EP+ +
Sbjct: 400 SHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFV 459
Query: 293 WGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYA 336
WGAL+ C + + ++A A K L EL+P N+ + L ++YA
Sbjct: 460 WGALLAACR-NHGNMELARIAAKHLAELEPENSGNGLLLTSLYA 502
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 122/243 (50%), Gaps = 4/243 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y+ G+V A +FD MP RD MI +N E++ F EM G
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
L A ++ + G+ +H + +K YE D + +SL+ MY+K GE+ ++ ++FS
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
++ +D + +N+MI G +++ +A EAL + + M G+ PD +T+ +++ +H +K
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLL---GRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
E+ M G +P + SII+ L + K DA + +L + PN A L+
Sbjct: 237 VSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLL 295
Query: 298 GVC 300
C
Sbjct: 296 PAC 298
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 214/423 (50%), Gaps = 48/423 (11%)
Query: 8 MDYASNALEG--NLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCM 61
M+YA++ G + FD N+MI GYV E+A ++ + R + + C+
Sbjct: 82 MNYAASIFRGIDDPCTFD---FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCL 138
Query: 62 IS----------GYLSAGQVFK-------------------------ACDLFDSMPDRDS 86
+ G GQVFK + +F+ + + +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHG--FSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
+W+SM+S + +E + LF M + + +G + L A + L+ G +H
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALL-ACANTGALNLGMSIH 257
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
G ++ I E ++I++ SLV MY KCG +D + IF M R+ +++++MI GL+ HG
Sbjct: 258 GFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGE 317
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
AL ++ M++ GL PD V ++ VL AC+H+GLV +G +F M+ ++P +HY +
Sbjct: 318 SALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCL 377
Query: 265 INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLN 324
++LLGRAG +++A E + +P+E N IW + C + + + ++ A + LL+L N
Sbjct: 378 VDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRV-RQNIELGQIAAQELLKLSSHN 436
Query: 325 APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHV 384
++ + N+Y+ ++ R E+ IKG+++ PG S + +KG+ H F S DR P
Sbjct: 437 PGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKC 496
Query: 385 EDI 387
++I
Sbjct: 497 KEI 499
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 191/345 (55%), Gaps = 13/345 (3%)
Query: 46 LFDTVPIRNKIA---WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELI 102
L DTV I+N++ C GY A +F+S+ +D ++WTSMIS N
Sbjct: 518 LLDTV-IQNELVDVYGKCRNMGY--------ATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 103 AEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSL 162
+EA+ LF M+ G S + + A S++ L++GR++H ++ + + + ++
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628
Query: 163 VSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDT 222
V MYA CG++ + +F + + + + SMI HG A+ +++ M + PD
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 688
Query: 223 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 282
++FL +L AC+HAGL+D+G M + Y L+P +HY+ ++++LGRA V +A EFV
Sbjct: 689 ISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVK 748
Query: 283 RLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHI 342
+ EP +W AL+ C S ++ ++ A +RLLEL+P N V + N++A R
Sbjct: 749 MMKTEPTAEVWCALLAACR-SHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 807
Query: 343 ELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
++ +R +M+ G+ K PGCSWI + G+VH F++ D+ P ++I
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEI 852
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 110/234 (47%), Gaps = 2/234 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G + A +FD MPDR + AW +MI YV N A A++L+ M G +F
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L A + + G +LH + VK Y + N+LVSMYAK ++ + R+F
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 185 R-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
+ D + WNS++ S G++ E L ++ M G P++ T + LTAC G E
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ S++ S ++I + R GK+ AE +LR + W +L+
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER-ILRQMNNADVVTWNSLI 358
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y G++ +A + M + D + W S+I GYVQN + EA+ F +M+A G
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ + A G ++ L G +LH +K ++ +L + N+L+ MY+KC R F
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA------- 233
M +D ISW ++I G + + EAL ++ + + + D + +L A +
Sbjct: 446 RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLI 505
Query: 234 ----HAGLVDKGW---ELFNSMVNSYG 253
H ++ KG + N +V+ YG
Sbjct: 506 VKEIHCHILRKGLLDTVIQNELVDVYG 532
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL-ILENSLVSMYAKCGEIDDSY 176
SP+ FA + G + QGRQLH KT ++L L LV MY KCG +DD+
Sbjct: 78 SPVEA-FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAE 136
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
++F M R +WN+MI +G + AL +Y M G+ +F +L ACA
Sbjct: 137 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 196
Query: 237 LVDKGWELFNSMVN 250
+ G EL + +V
Sbjct: 197 DIRSGSELHSLLVK 210
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 171/307 (55%), Gaps = 2/307 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSP 119
+I Y+ Q+ A +F + +D ++W SMISG V E EAI LF M + G P
Sbjct: 245 LIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ A S+ +D GR +H + ++D + ++V MYAKCG I+ + IF
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ + ++ +WN+++ GL+ HG E+L +E M++ G P+ VTFL L AC H GLVD
Sbjct: 365 NGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVD 424
Query: 240 KGWELFNSMVN-SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+G F+ M + Y L P +HY +I+LL RAG + +A E V +PV+P+ I GA++
Sbjct: 425 EGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILS 484
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C T ++ L+++ ++ +V L NI+AAN R ++ +R+ M++KG+ K
Sbjct: 485 ACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISK 544
Query: 359 APGCSWI 365
PG S+I
Sbjct: 545 VPGSSYI 551
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 131/259 (50%), Gaps = 21/259 (8%)
Query: 46 LFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 105
+D + ++N ++ Y G+ AC +F MP RD ++WT +I+G+ + L EA
Sbjct: 137 FYDDIYVQNS-----LVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
+ F +M P T+ + + G V L G+ +HG+ +K L N+L+ M
Sbjct: 192 LDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDM 248
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVT 224
Y KC ++ D+ R+F + +DK+SWNSMI GL R+ EA+ ++ M G+ PD
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 225 FLGVLTACAHAGLVDKG-WELFNSMVNSYGLQPG--FDHYI--SIINLLGRAGKVKDAEE 279
VL+ACA G VD G W V+ Y L G +D +I +I+++ + G ++ A E
Sbjct: 309 LTSVLSACASLGAVDHGRW------VHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 280 FVLRLPVEPNHAIWGALVG 298
+ N W AL+G
Sbjct: 363 -IFNGIRSKNVFTWNALLG 380
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
S ++ +++S Y + I + +++GFSP TF +F A G + + +G+Q+HG
Sbjct: 71 SFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 130
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASE 205
+ K + D+ ++NSLV Y CGE ++ ++F M RD +SW +I G + G E
Sbjct: 131 IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 206 ALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
AL + M + P+ T++ VL + G + G
Sbjct: 191 ALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLG 223
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 178/326 (54%), Gaps = 7/326 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSP 119
+I + G+ A + + D++ I W MI GYV+N EA+ M++ P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+FA A + L + +H + + + E + IL ++LV +YAKCG+I S +F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
++ D WN+MI G + HG A+EA+ V+ M + PD++TFLG+LT C+H GL++
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+G E F M + +QP +HY ++++LLGRAG+VK+A E + +P+EP+ IW +L+
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
K + ++ A + L + +V L NIY++ + +R+ M +G+RKA
Sbjct: 344 SRTYK-NPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKA 399
Query: 360 PGCSWILVKGRVHVFSSGDRLEPHVE 385
G SW+ G +H F +GD H+E
Sbjct: 400 KGKSWLEFGGMIHRFKAGD--TSHIE 423
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N I + ++ Y G + + ++F S+ D W +MI+G+ + L EAI +F EM
Sbjct: 199 NAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME 258
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKCGE 171
A SP + TF L L++G++ G+ + + LE+ ++V + + G
Sbjct: 259 AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR-FSIQPKLEHYGAMVDLLGRAGR 317
Query: 172 IDDSYRIFSNMAYR-DKISWNSMI 194
+ ++Y + +M D + W S++
Sbjct: 318 VKEAYELIESMPIEPDVVIWRSLL 341
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 193/354 (54%), Gaps = 23/354 (6%)
Query: 55 KIAWTCMISGYLSAGQV----------FKACD----LFDSMPDRDSIAWTSMISGYVQNE 100
KI C+ +G++S V F+A + F+ + R+ I+W +MISG+ QN
Sbjct: 393 KIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNG 452
Query: 101 LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA--YLDQGRQLHGMQVKTIYEYDLIL 158
EA+ +F A P TF + A+ + QG++ H +K ++
Sbjct: 453 FSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVV 511
Query: 159 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
++L+ MYAK G ID+S ++F+ M+ +++ W S+I S HG + ++ M++ +
Sbjct: 512 SSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENV 571
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
PD VTFL VLTAC G+VDKG+E+FN M+ Y L+P +HY ++++LGRAG++K+AE
Sbjct: 572 APDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAE 631
Query: 279 EFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAN 338
E + +P P ++ +++G C L + + ++ + +E+ P + +V + NIYA
Sbjct: 632 ELMSEVPGGPGESMLQSMLGSCRL-HGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEK 690
Query: 339 DRHIELTSLRKEMRIKGVRKAPGCSWILV---KGRVHV--FSSGDRLEPHVEDI 387
+ + +RK MR K V K G SWI V +G + + FSSGD+ P ++I
Sbjct: 691 EEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEI 744
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 146/298 (48%), Gaps = 27/298 (9%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG--FSPLNG 122
Y AG+ A +F+++ D D ++W +++SG+ N++ A++ M + G F
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTY 177
Query: 123 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 182
+ A+ F +GS +L G QL VKT E DL++ NS ++MY++ G + R+F M
Sbjct: 178 STALSF-CVGSEGFL-LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEM 235
Query: 183 AYRDKISWNSMIMGLSDHGR-ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
+++D ISWNS++ GLS G EA+ ++ M+ G+ D V+F V+T C H +
Sbjct: 236 SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLA 295
Query: 242 WELFNSMVNSYGLQPGFDHYISIIN-LLGRAGK--VKDAEEFVLRLPVEPNHAIWGALVG 298
+ ++ ++ G++ + + N L+ R K V +A + V E N W ++
Sbjct: 296 RQ-----IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS 350
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
S D V+ R + P N V L N N++ +++ ++I G+
Sbjct: 351 ----SNKDDAVSIFLNMRFDGVYP-NEVTFVGLINAVKCNEQ------IKEGLKIHGL 397
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 124/243 (51%), Gaps = 18/243 (7%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S Y G + +F M +R+ ++WT+MIS +A+S+F M G P
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPN 371
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TF L A+ + +G ++HG+ +KT + + + NS +++YAK ++D+ + F
Sbjct: 372 EVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE 431
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVY-----ETMLEFGLYPDTVTFLGVLTACAHA 235
++ +R+ ISWN+MI G + +G + EAL ++ ETM P+ TF VL A A A
Sbjct: 432 DITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM------PNEYTFGSVLNAIAFA 485
Query: 236 GLVD-KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
+ K + ++ + GL +++++ + G + ++E+ V + N +W
Sbjct: 486 EDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEK-VFNEMSQKNQFVWT 544
Query: 295 ALV 297
+++
Sbjct: 545 SII 547
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 13/239 (5%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIA-EAISLFGEMMAHGFSPL 120
I+ Y +G A +FD M +D I+W S++SG Q EA+ +F +MM G
Sbjct: 216 ITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELD 275
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ +F + L RQ+HG+ +K YE L + N L+S Y+KCG ++ +F
Sbjct: 276 HVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFH 335
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M+ R+ +SW +MI D +A++++ M G+YP+ VTF+G++ A + +
Sbjct: 336 QMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKE 390
Query: 241 GWELFNSMVNS-YGLQPGFDHYISIINLLGRAGKVKDA----EEFVLRLPVEPNHAIWG 294
G ++ + + + +P + S I L + ++DA E+ R + N I G
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALEDAKKAFEDITFREIISWNAMISG 447
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 10/208 (4%)
Query: 74 ACDLFDSMPDRDSIAWTSM---ISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 130
A LFD R+ A TS+ IS ++ A A+S+F E + G+ + L A
Sbjct: 27 AHKLFDGSSQRN--ATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLA 84
Query: 131 MGSV-AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS 189
+ + L +G Q+HG + + + + N+++ MY K G D++ IF N+ D +S
Sbjct: 85 LKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 190 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
WN+++ G D+ AL M G+ D T+ L+ C + G +L +++V
Sbjct: 145 WNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 250 NSYGLQPGFDHYISIINLLGRAGKVKDA 277
+ GL+ S I + R+G + A
Sbjct: 202 KT-GLESDLVVGNSFITMYSRSGSFRGA 228
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 181/331 (54%), Gaps = 3/331 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ +A +F +P +D ++W ++ISG+ N + +I F M+ +
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 362
Query: 119 PLNGTFAV-LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
+ V + G+ + +L+Q + H +K ++ + + SLV +Y++CG + ++ +
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAG 236
+F+ +A +D + W S+I G HG+ ++AL + M++ + P+ VTFL +L+AC+HAG
Sbjct: 423 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 482
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
L+ +G +F MVN Y L P +HY +++LLGR G + A E R+P P I G L
Sbjct: 483 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTL 542
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+G C + + + ++A K+L EL+ +A ++ + N+Y + LR ++ +G+
Sbjct: 543 LGACRIHQ-NGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGI 601
Query: 357 RKAPGCSWILVKGRVHVFSSGDRLEPHVEDI 387
+K S I ++ +VH F + D L P E +
Sbjct: 602 KKGLAESLIEIRRKVHRFVADDELHPEKEPV 632
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 128/238 (53%), Gaps = 3/238 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y + +A +LF + ++D I+W+++I+ YVQN AEA+ +F +MM G P
Sbjct: 204 LLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPN 263
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + A + L+QGR+ H + ++ E ++ + +LV MY KC +++Y +FS
Sbjct: 264 VATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFS 323
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGLVD 239
+ +D +SW ++I G + +G A ++ + M LE PD + + VL +C+ G ++
Sbjct: 324 RIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLE 383
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ + F+S V YG S++ L R G + +A + + ++ + +W +L+
Sbjct: 384 QA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLI 439
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 123/240 (51%), Gaps = 3/240 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGF 117
+ +I Y+ G++ +A +FD + D + W+SM+SG+ +N +A+ F M MA
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
+P T L A ++ GR +HG ++ + DL L NSL++ YAK ++
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 219
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F +A +D ISW+++I +G A+EAL V+ M++ G P+ T L VL ACA A
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+++G + + GL+ +++++ + ++A R+P + W AL+
Sbjct: 280 LEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALI 337
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A +F M R W +++ + + E + F M P N T V A G
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 134 VAYLDQGRQLHGMQVKTI-YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 192
+ ++ G +HG K + DL + +SL+ MY KCG + ++ R+F + D ++W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 193 MIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACA-----------HAGLVDK 240
M+ G +G +A+ + M + + PD VT + +++AC H ++ +
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 241 GW----ELFNSMVNSYGLQPGFDHYISIINLLG 269
G+ L NS++N Y F +++ ++
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 225
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 202/433 (46%), Gaps = 78/433 (18%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQ------------ 70
D ++N ++ YV+ ++ A++LFD + N ++WT +ISGY G+
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 71 --------------VFKACD---------------------------------------- 76
VFKAC
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 77 -----LFDSMPD--RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF--AVL 127
+FDSM R+ ++WTSMI+ Y QN EAI LF A S F A +
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 128 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 187
A S+ L G+ HG+ + YE + ++ SL+ MYAKCG + + +IF +
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
IS+ SMIM + HG A+ +++ M+ + P+ VT LGVL AC+H+GLV++G E +
Sbjct: 303 ISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSL 362
Query: 248 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPV--EPNHAIWGALVGVCGLSKT 305
M YG+ P HY ++++LGR G+V +A E + V E +WGAL+ G
Sbjct: 363 MAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSA-GRLHG 421
Query: 306 DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
++ S A+KRL++ + ++AL N YA + + SLR EM+ G K CSWI
Sbjct: 422 RVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWI 481
Query: 366 LVKGRVHVFSSGD 378
K V+VF +GD
Sbjct: 482 ENKDSVYVFHAGD 494
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Query: 92 MISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI 151
M G++QN +A A SLF + F L T A L + LH + +K
Sbjct: 1 MKKGFIQNVHLAPATSLFVPQYKNDFFHLK-TKAFLVHKLSESTNAAFTNLLHTLTLKLG 59
Query: 152 YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYE 211
+ D N LV Y K EI+ + ++F M + +SW S+I G +D G+ AL++++
Sbjct: 60 FASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQ 119
Query: 212 TMLE-FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGR 270
M E + P+ TF V AC+ G + ++ + GL+ S++++ G+
Sbjct: 120 KMHEDRPVPPNEYTFASVFKACSALAESRIGKNI-HARLEISGLRRNIVVSSSLVDMYGK 178
Query: 271 AGKVKDAEE 279
V+ A
Sbjct: 179 CNDVETARR 187
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 191/351 (54%), Gaps = 3/351 (0%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAW 89
+++ Y + G ++ A+ N + + MI GY S G++ +A LFDS+ +++ + W
Sbjct: 301 IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVW 360
Query: 90 TSMISGYVQNELIAEAISLFGEMMAHGF-SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
T+M GY+ + L +A+ +P + + GA AY++ G+++HG +
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
+T D L + V MY+KCG ++ + RIF + RD + +N+MI G + HG +++
Sbjct: 421 RTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQ 480
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
+E M E G PD +TF+ +L+AC H GLV +G + F SM+ +Y + P HY +I+L
Sbjct: 481 HFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLY 540
Query: 269 GRAGKVKDAEEFVLRL-PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
G+A ++ A E + + VE + I GA + C +K + ++ ++LL ++ N
Sbjct: 541 GKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNK-NTELVKEVEEKLLVIEGSNGSR 599
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
++ + N YA++ R E+ +R +MR K + GCSW + + H+F+S D
Sbjct: 600 YIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSD 650
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 136/266 (51%), Gaps = 11/266 (4%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDS-MPDR 84
S N ++N Y ++G L +A+ +FD + RN +W +I+ Y+ V +A +LF+S +R
Sbjct: 25 SSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCER 84
Query: 85 DSIAWTSMISGYVQNE-LIAEAISLFGEMMAHGFSPL---NGTFAVLFGAMGSVAYLDQG 140
D I + +++SG+ + + +EAI +FGEM + + T + + + G
Sbjct: 85 DLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYG 144
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF--SNMAYRDKISWNSMIMGLS 198
QLHG+ VKT + +SL+ MY+KCG+ + IF S + + D ++ N+MI
Sbjct: 145 EQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYC 204
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
G +AL+V+ E DT+++ ++ A G ++ ++ SM + GL+
Sbjct: 205 REGDIDKALSVFWRNPELN---DTISWNTLIAGYAQNGYEEEALKMAVSMEEN-GLKWDE 260
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRL 284
+ +++N+L +K +E R+
Sbjct: 261 HSFGAVLNVLSSLKSLKIGKEVHARV 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 3/207 (1%)
Query: 26 SLNSMINGYVQAGQLEKAQELFD--TVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
+++S+I+ Y + G+ ++ +F+ V + +A MI+ Y G + KA +F P+
Sbjct: 162 AVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPE 221
Query: 84 -RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
D+I+W ++I+GY QN EA+ + M +G +F + + S+ L G++
Sbjct: 222 LNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKE 281
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H +K + + + +V +Y KCG + + + + S +SMI+G S G+
Sbjct: 282 VHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGK 341
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVL 229
EA +++++ E L T FLG L
Sbjct: 342 MVEAKRLFDSLSEKNLVVWTAMFLGYL 368
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 138/306 (45%), Gaps = 9/306 (2%)
Query: 1 MYSVFGLMDYASNALEGNLNNF-DDQSLNSMINGYVQAGQLEKAQELFDTVP-IRNKIAW 58
MYS G N G+ F D + N+MI Y + G ++KA +F P + + I+W
Sbjct: 169 MYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISW 228
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+I+GY G +A + SM + + + W G V N +++ SL H
Sbjct: 229 NTLIAGYAQNGYEEEALKMAVSMEE-NGLKWDEHSFGAVLN-VLSSLKSLKIGKEVHARV 286
Query: 119 PLNGTFAVLFGAMGSV-AYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSY 176
NG+++ F + G V Y G + +Y + +L +S++ Y+ G++ ++
Sbjct: 287 LKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAK 346
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL-YPDTVTFLGVLTACAHA 235
R+F +++ ++ + W +M +G + + L + + PD++ + VL AC+
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQ 406
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
++ G E+ + + G+ + +++ + G V+ AE + E + ++ A
Sbjct: 407 AYMEPGKEIHGHSLRT-GILMDKKLVTAFVDMYSKCGNVEYAER-IFDSSFERDTVMYNA 464
Query: 296 LVGVCG 301
++ C
Sbjct: 465 MIAGCA 470
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 169/306 (55%), Gaps = 3/306 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS Y G + A F + +D I++ S+I+G V N E+ LF EM G P
Sbjct: 349 IISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPD 408
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T + A +A L G HG V Y + + N+L+ MY KCG++D + R+F
Sbjct: 409 ITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFD 468
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M RD +SWN+M+ G HG EAL+++ +M E G+ PD VT L +L+AC+H+GLVD+
Sbjct: 469 TMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDE 528
Query: 241 GWELFNSMVN-SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
G +LFNSM + + P DHY + +LL RAG + +A +FV ++P EP+ + G L+
Sbjct: 529 GKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSA 588
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C K +A++ + +K++ L V L N Y+A +R + +R + +G+ K
Sbjct: 589 CWTYK-NAELGNEVSKKMQSLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKT 646
Query: 360 PGCSWI 365
PG SW+
Sbjct: 647 PGYSWV 652
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 11/230 (4%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 115
+ T ++ Y + + A +FD ++ + W++MI GYV+NE+I EA +F +M+ +
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 116 GFSPLNGTFAVLFGAMGSVAY--LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
+ A+ MG + L GR +H VK + DL ++N+++S YAK G +
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
D++R FS + +D IS+NS+I G + R E+ ++ M G+ PD T LGVLTAC+
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEE 279
H + G S + Y + G+ SI N L + GK+ A+
Sbjct: 421 HLAALGHG-----SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKR 465
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 118/241 (48%), Gaps = 13/241 (5%)
Query: 65 YLSAGQVFKACDLFDSMPDR--DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG 122
Y S +V A +FD +P + IAW MI Y N+ +A+ L+ +M+ G P
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 123 TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM 182
T+ + A + +D G+ +H + + D+ + +LV YAKCGE++ + ++F M
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 183 AYRDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKG 241
RD ++WN+MI G S H ++ + ++ M GL P+ T +G+ A AG + +G
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 242 WELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
V+ Y + GF + + I+++ ++ + A V L + N W A++
Sbjct: 225 -----KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARR-VFDLDFKKNEVTWSAMI 278
Query: 298 G 298
G
Sbjct: 279 G 279
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 24/254 (9%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGF 117
T ++ Y G++ A +FD MP RD +AW +MISG+ + + + I LF +M G
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGL 201
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
SP T +F A+G L +G+ +HG + + DL+++ ++ +YAK I + R
Sbjct: 202 SPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARR 261
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG------VLTA 231
+F +++++W++MI G ++ EA V+ M L D V + +L
Sbjct: 262 VFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMG 317
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGF--DHYI--SIINLLGRAGKVKDA----EEFVLR 283
CA G + G V+ Y ++ GF D + +II+ + G + DA E L+
Sbjct: 318 CARFGDLSGG-----RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372
Query: 284 LPVEPNHAIWGALV 297
+ N I G +V
Sbjct: 373 DVISYNSLITGCVV 386
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 161 SLVSMYAKCGEIDDSYRIFSNMAYR--DKISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
+L +YA C E++ + +F + + + I+W+ MI + + A +AL +Y ML G+
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV 99
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
P T+ VL ACA +D G +L +S VN ++++ + G+++ A
Sbjct: 100 RPTKYTYPFVLKACAGLRAIDDG-KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAI 158
Query: 279 EFVLRLPVEPNHAIWGALV 297
+ +P + + W A++
Sbjct: 159 KVFDEMP-KRDMVAWNAMI 176
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 37/165 (22%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ Y + G+L+ A+ +FDT+ R+ ++W M+ G+ G
Sbjct: 448 NALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG------------------ 489
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
L EA+SLF M G +P T + A +D+G+QL
Sbjct: 490 -------------LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM 536
Query: 148 VKTIYEYDLILE----NSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
+ ++++I N + + A+ G +D++Y + M + I
Sbjct: 537 SRG--DFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDI 579
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 195/388 (50%), Gaps = 11/388 (2%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----DTVPIRNKI 56
MYS G ++ A + ++ N D + NSMI GY QAG KA ELF D N I
Sbjct: 396 MYSKCGKLEDARKVFD-SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMP-----DRDSIAWTSMISGYVQNELIAEAISLFGE 111
W MISGY+ G +A DLF M R++ W +I+GY+QN EA+ LF +
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
M F P + T L A ++ R++HG ++ + ++N+L YAK G+
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
I+ S IF M +D I+WNS+I G HG AL ++ M G+ P+ T ++ A
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
G VD+G ++F S+ N Y + P +H +++ L GRA ++++A +F+ + ++
Sbjct: 635 HGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
IW + + C + D D+A A + L L+P N + IYA + K
Sbjct: 695 IWESFLTGCRIH-GDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPR 753
Query: 352 RIKGVRKAPGCSWILVKGRVHVFSSGDR 379
R ++K G SWI V+ +H F++GD+
Sbjct: 754 RDNLLKKPLGQSWIEVRNLIHTFTTGDQ 781
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 146/312 (46%), Gaps = 12/312 (3%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRN----KI 56
+Y+ G +D+A+ + D + NS++ Y Q G+ E+A EL + +
Sbjct: 225 VYAKCGELDFATKFFR-RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMPD----RDSIAWTSMISGYVQNELIAEAISLFGEM 112
W +I GY G+ A DL M D WT+MISG + N + +A+ +F +M
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
G P T A + ++QG ++H + VK + D+++ NSLV MY+KCG++
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+D+ ++F ++ +D +WNSMI G G +A ++ M + L P+ +T+ +++
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PN 289
G + +LF M +Q + II + GK +A E ++ PN
Sbjct: 464 IKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Query: 290 HAIWGALVGVCG 301
+L+ C
Sbjct: 524 SVTILSLLPACA 535
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 118/249 (47%), Gaps = 4/249 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++S Y G + A +FDSM +R+ W++MI Y + E LF MM G
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + F + + ++ G+ +H + +K L + NS++++YAKCGE+D + +
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M RD I+WNS+++ +G+ EA+ + + M + G+ P VT+ ++ G
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL---PVEPNHAIWGA 295
D +L M ++G+ + ++I+ L G A + ++ V PN +
Sbjct: 299 DAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMS 357
Query: 296 LVGVCGLSK 304
V C K
Sbjct: 358 AVSACSCLK 366
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 42/274 (15%)
Query: 98 QNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLI 157
+N + EA + G T+ L + + GR LH + E D+
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA-RFGLFTEPDVF 116
Query: 158 LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG 217
+E L+SMYAKCG I D+ ++F +M R+ +W++MI S R E ++ M++ G
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 218 LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
+ PD F +L CA+ G V+ G ++ +S+V G+ SI+ + + G++
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL--- 232
Query: 278 EEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAA 337
D A++ +R+ E D + A V L Y
Sbjct: 233 ------------------------------DFATKFFRRMRERDVI-AWNSVLLA--YCQ 259
Query: 338 NDRHIELTSLRKEMRIKGVRKAPG-CSW-ILVKG 369
N +H E L KEM +G+ +PG +W IL+ G
Sbjct: 260 NGKHEEAVELVKEMEKEGI--SPGLVTWNILIGG 291
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 195/411 (47%), Gaps = 45/411 (10%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQEL-----FDTV----- 50
MY G MD A + + D + MINGY + G +E A EL F+ V
Sbjct: 262 MYLKCGRMDEARFVFD-RMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAV 320
Query: 51 ------------------------PIRNK-----IAWTCMISGYLSAGQVFKACDLFDSM 81
+R + I T +IS Y +V +F
Sbjct: 321 TIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGA 380
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+ W+++I+G VQNEL+++A+ LF M P T L A ++A L Q
Sbjct: 381 SKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAM 440
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK----ISWNSMIMGL 197
+H KT + L LV +Y+KCG ++ +++IF+ + + K + W ++I G
Sbjct: 441 NIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
HG AL V+ M+ G+ P+ +TF L AC+H+GLV++G LF M+ Y
Sbjct: 501 GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLAR 560
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
+HY I++LLGRAG++ +A + +P EP +WGAL+ C ++ + + A +L
Sbjct: 561 SNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAAC-VTHENVQLGEMAANKL 619
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVK 368
EL+P N +V L NIYAA R ++ +R M G+RK PG S I ++
Sbjct: 620 FELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 157/337 (46%), Gaps = 22/337 (6%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R+K +++ Y++ G+V A D+FD M +RD I+W +MISGY +N + +A+ +F M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ + T + G + L+ GR +H + + + ++N+LV+MY KCG +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
D++ +F M RD I+W MI G ++ G AL + M G+ P+ VT +++ C
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 233 AHAGLVD-----KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 287
A V+ GW + + + ++ S+I++ + +V D V +
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIET------SLISMYAKCKRV-DLCFRVFSGASK 382
Query: 288 PNHAIWGALVGVCGLSKTDADVASRATK-RLLELDPLNAPGHVALCNIYAANDRHIELTS 346
+ W A++ C ++ +D + R +++P N +L YAA L
Sbjct: 383 YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEP-NIATLNSLLPAYAA------LAD 435
Query: 347 LRKEMRIKGVRKAPG--CSWILVKGRVHVFSSGDRLE 381
LR+ M I G S G VHV+S LE
Sbjct: 436 LRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLE 472
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 143/316 (45%), Gaps = 40/316 (12%)
Query: 25 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIA---WTCMISGYLSAGQVFKACDLFDSM 81
+ S++N + + K + L V +++ + + Y G + A LF+ M
Sbjct: 16 KQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEM 75
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS--PLNGTFAVLFGAMGSVAYLDQ 139
P +++ +I YV+ L +AIS+F M++ G P T+ + A G + +
Sbjct: 76 PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G +HG +++ + D ++N+L++MY G+++ + +F M RD ISWN+MI G
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW---------------EL 244
+G ++AL +++ M+ + D T + +L C H ++ G E+
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEV 255
Query: 245 FNSMVNSYGLQPG--------FDH--------YISIINLLGRAGKVKDAEEFVLRLP--- 285
N++VN Y L+ G FD + +IN G V++A E +
Sbjct: 256 KNALVNMY-LKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 286 VEPNHAIWGALVGVCG 301
V PN +LV VCG
Sbjct: 315 VRPNAVTIASLVSVCG 330
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 174/336 (51%), Gaps = 8/336 (2%)
Query: 59 TCMISGYLSAGQVFKAC-DLFDSMPD-RDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
T +I Y + + C LF M RD +AW +I+ + + AI LFG++
Sbjct: 306 TALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEK 364
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSY 176
SP TF+ + A + +H +K + D +L NSL+ YAKCG +D
Sbjct: 365 LSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCM 424
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
R+F +M RD +SWNSM+ S HG+ L V++ M + PD+ TF+ +L+AC+HAG
Sbjct: 425 RVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAG 481
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
V++G +F SM P +HY +I++L RA + +AEE + ++P++P+ +W AL
Sbjct: 482 RVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIAL 541
Query: 297 VGVCGLSKTDADVASRATKRLLEL-DPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 355
+G C + + A +L EL +P N+ ++ + NIY A E KEM
Sbjct: 542 LGSCR-KHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWR 600
Query: 356 VRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
VRK P SW + +VH F+SG R P E + ++
Sbjct: 601 VRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYREL 636
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
+N I +I+ Y G + A +FD+MP+R+ ++WT++I+GYVQ E LF M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
++H F P T L + S Y + G+Q+HG+ +K + + N+++SMY +C +
Sbjct: 154 LSHCF-PNEFT---LSSVLTSCRY-EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 173 DDSYR---IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
+Y +F + +++ ++WNSMI +A+ V+ M G+ D T L +
Sbjct: 209 AAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNIC 268
Query: 230 TA 231
++
Sbjct: 269 SS 270
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 102 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY--DLILE 159
I A+SLF S +A LF A L G LH + Y Y ++IL
Sbjct: 42 IRRAVSLFYSAPVELQS--QQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILA 99
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
N L++MYAKCG I + ++F M R+ +SW ++I G G E ++ +ML +
Sbjct: 100 NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CF 158
Query: 220 PDTVTFLGVLTACAH 234
P+ T VLT+C +
Sbjct: 159 PNEFTLSSVLTSCRY 173
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 174/339 (51%), Gaps = 40/339 (11%)
Query: 55 KIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA 114
K+ ++ Y G + A +F+ M ++D I+WT++++G N EA+ LF M
Sbjct: 364 KLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRV 423
Query: 115 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
G +P A + A + L+ G+Q+HG +K+ + L + NSLV+MY KCG ++D
Sbjct: 424 GGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLED 483
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
+ IF++M RD I+W +I+G A
Sbjct: 484 ANVIFNSMEIRDLITWTCLIVGY-----------------------------------AK 508
Query: 235 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
GL++ F+SM YG+ PG +HY +I+L GR+G E+ + ++ VEP+ +W
Sbjct: 509 NGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWK 568
Query: 295 ALVGVCGLSKTDADV--ASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMR 352
A++ S+ ++ RA K L+EL+P NA +V L N+Y+A R E ++R+ M+
Sbjct: 569 AILAA---SRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMK 625
Query: 353 IKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
+ + K PGCSW+ KG+VH F S DR P + +I ++
Sbjct: 626 SRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKV 664
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 169/323 (52%), Gaps = 9/323 (2%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N ++ ++G++++A+++FD +P R++ W MI Y ++ ++ A LF S P +++I
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W ++ISGY ++ EA +LF EM + G P T + S+ L +G Q+HG
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM-AYRDKISWNSMIMGLSDHGRASEA 206
+KT ++ D+ + N L++MYA+C I ++ +F M ++ ++W SM+ G S +G A +A
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+ + + G + TF VLTACA G ++ +V S G + ++I+
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALID 270
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC---GLSKTDADVASRATKRLLELDPL 323
+ + +++ A + + V+ + W +++ C GL + R +R +++D
Sbjct: 271 MYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDF 329
Query: 324 NAPGHVALCNIYAANDRHIELTS 346
P ++ N +A + +++ S
Sbjct: 330 TIP---SILNCFALSRTEMKIAS 349
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 2/220 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+ +I Y ++ A L + M D ++W SMI G V+ LI EA+S+FG M
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 119 PLNGTFAVLFGAMG-SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
+ T + S + H + VKT Y ++ N+LV MYAK G +D + +
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALK 385
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+F M +D ISW +++ G + +G EAL ++ M G+ PD + VL+A A L
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
++ G ++ + + S G S++ + + G ++DA
Sbjct: 446 LEFGQQVHGNYIKS-GFPSSLSVNNSLVTMYTKCGSLEDA 484
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
NS++ Y + G LE A +F+++ IR+ I WTC+I GY G + A FDSM
Sbjct: 469 NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 172/324 (53%), Gaps = 4/324 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + A +F + W S+ISGY Q EA L EM+ GF P
Sbjct: 321 LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPN 380
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHG--MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ T A + +A L G++ H ++ K +Y + L NSLV +YAK G+I + ++
Sbjct: 381 SITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM-LWNSLVDVYAKSGKIVAAKQV 439
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
M+ RD++++ S+I G + G AL +++ M G+ PD VT + VL+AC+H+ LV
Sbjct: 440 SDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLV 499
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+G LF M YG++P H+ +++L GRAG + A++ + +P +P+ A W L+
Sbjct: 500 HEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLN 559
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
C + + + A ++LLE+ P N +V + N+YAA +L +R MR GV+K
Sbjct: 560 ACHI-HGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKK 618
Query: 359 APGCSWILVKGRVHVFSSGDRLEP 382
PGC+WI +FS GD P
Sbjct: 619 DPGCAWIDTDSGFSLFSVGDTSSP 642
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 123/258 (47%), Gaps = 8/258 (3%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM----PD 83
N++I+ Y + + A+ LFD + R+ ++W +I+ Y S G +A +LFD M +
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFG--AMGSVAYLDQGR 141
I W + G +Q A+ L M F A++ G A + + G+
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRM--RNFPTSLDPVAMIIGLKACSLIGAIRLGK 300
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
++HG+ + + Y+ + N+L++MY+KC ++ + +F +WNS+I G +
Sbjct: 301 EIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLN 360
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
++ EA + ML G P+++T +L CA + G E ++ + +
Sbjct: 361 KSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLW 420
Query: 262 ISIINLLGRAGKVKDAEE 279
S++++ ++GK+ A++
Sbjct: 421 NSLVDVYAKSGKIVAAKQ 438
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Query: 68 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL 127
A + + D+ +P W +I+ Y +NEL E I+ + M++ G P T+ +
Sbjct: 97 AQSIIENSDILHPLP------WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSV 150
Query: 128 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 187
A G + GR +HG + Y+ L + N+L+SMY + + + R+F M RD
Sbjct: 151 LKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDA 210
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+SWN++I + G SEA +++ M G+ +T+ + C G
Sbjct: 211 VSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 44/231 (19%)
Query: 28 NSMINGYVQAGQLEKAQELF----------------DTVPIRNKIA-------------- 57
NS+I+GY Q + E+A L +P+ +IA
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 58 ----------WTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAIS 107
W ++ Y +G++ A + D M RD + +TS+I GY A++
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALA 469
Query: 108 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSM 165
LF EM G P + T + A + +G +L M+++ Y L++ +V +
Sbjct: 470 LFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLF-MKMQCEYGIRPCLQHFSCMVDL 528
Query: 166 YAKCGEIDDSYRIFSNMAYRDK-ISWNSMIMGLSDHGRASEALTVYETMLE 215
Y + G + + I NM Y+ +W +++ HG E +LE
Sbjct: 529 YGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLE 579
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 183/337 (54%), Gaps = 1/337 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
+++++ Y + G +A +LF V + I MI Y S G++ A +F+ + ++ I
Sbjct: 357 STLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLI 416
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W SM +G+ QN E + F +M + + + A S++ L+ G Q+
Sbjct: 417 SWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARA 476
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
+ D ++ +SL+ +Y KCG ++ R+F M D++ WNSMI G + +G+ EA+
Sbjct: 477 TIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAI 536
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
+++ M G+ P +TF+ VLTAC + GLV++G +LF SM +G P +H+ +++L
Sbjct: 537 DLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDL 596
Query: 268 LGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPG 327
L RAG V++A V +P + + ++W +++ C + A + +A ++++EL+P N+
Sbjct: 597 LARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKA-MGKKAAEKIIELEPENSVA 655
Query: 328 HVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSW 364
+V L I+A + +RK MR V K PG SW
Sbjct: 656 YVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 140/306 (45%), Gaps = 34/306 (11%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D + +S++N Y + G L A + + + + + + +ISGY + G+V ++ LFD
Sbjct: 221 DSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKS 280
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
+R I W SMISGY+ N + EA+ LF EM + T A + A + +L+ G+Q
Sbjct: 281 NRCVILWNSMISGYIANNMKMEALVLFNEMRNETRED-SRTLAAVINACIGLGFLETGKQ 339
Query: 143 LHGMQVK-------------------------------TIYEYDLILENSLVSMYAKCGE 171
+H K + YD IL NS++ +Y CG
Sbjct: 340 MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGR 399
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
IDD+ R+F + + ISWNSM G S +G E L + M + L D V+ V++A
Sbjct: 400 IDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISA 459
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
CA ++ G ++F + GL S+I+L + G V+ V V+ +
Sbjct: 460 CASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRR-VFDTMVKSDEV 517
Query: 292 IWGALV 297
W +++
Sbjct: 518 PWNSMI 523
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 36/275 (13%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
MYS G M A N + + + + S N+MI GY+ +G+ + FD +P R+ +W
Sbjct: 71 MYSRSGKMGIARNLFD-EMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNV 129
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++SG+ AG++ A LF++MP++D + S++ GY+ N EA+ LF E+ FS
Sbjct: 130 VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSAD 186
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE--------- 171
T + A + L G+Q+H + E D + +SLV++YAKCG+
Sbjct: 187 AITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLE 246
Query: 172 ----------------------IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTV 209
+++S +F + R I WNSMI G + EAL +
Sbjct: 247 QIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVL 306
Query: 210 YETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+ M D+ T V+ AC G ++ G ++
Sbjct: 307 FNEMRN-ETREDSRTLAAVINACIGLGFLETGKQM 340
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 52/294 (17%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++ Y +G++ A +LFD MPDR+ +W +MI GY+ + GE
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNS----------GE--------- 108
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
GT S+ + D + G Y ++++ VS +AK GE+ + R+F+
Sbjct: 109 KGT---------SLRFFDMMPERDG------YSWNVV-----VSGFAKAGELSVARRLFN 148
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M +D ++ NS++ G +G A EAL +++ E D +T VL ACA +
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFK---ELNFSADAITLTTVLKACAELEALKC 205
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV- 299
G ++ ++ G++ S++N+ + G ++ A + ++ +H++ + G
Sbjct: 206 GKQIHAQILIG-GVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYA 264
Query: 300 -CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMR 352
CG + R + R + L G Y AN+ +E L EMR
Sbjct: 265 NCGRVNESRGLFDRKSNRCVILWNSMISG-------YIANNMKMEALVLFNEMR 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 141 RQLHGMQVKTIYEYDL-ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
RQ +G+ +K + + I+ N L+ MY++ G++ + +F M R+ SWN+MI G +
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
G +L ++ M E Y V V++ A AG + LFN+M
Sbjct: 106 SGEKGTSLRFFDMMPERDGYSWNV----VVSGFAKAGELSVARRLFNAM 150
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 176/334 (52%), Gaps = 4/334 (1%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R+ T ++S Y + A +FD M +RD + WT MI G+ + A+ F EM
Sbjct: 435 RSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ + + GA +A L QG H + ++T ++ + + +LV MY K G+
Sbjct: 495 YREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKY 554
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+ + IFS + D WNSM+ S HG +AL+ +E +LE G PD VT+L +L AC
Sbjct: 555 ETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAAC 614
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA- 291
+H G +G L+N M G++ GF HY ++NL+ +AG V +A E + + P N A
Sbjct: 615 SHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAE 673
Query: 292 IWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
+W L+ C ++ + + A +++L+LDP + H+ L N+YA N R ++ +R+++
Sbjct: 674 LWRTLLSAC-VNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKI 732
Query: 352 RIKGVRKAPGCSWILV-KGRVHVFSSGDRLEPHV 384
R K PG SWI V VFSSGD+ P V
Sbjct: 733 RGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEV 766
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 97/182 (53%), Gaps = 1/182 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + T ++ Y S G + A +FD + +RD++AW +MI G ++N+ I + + F M+
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P T++++ + G+ +H + + DL L+N+L+ MY CG++
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMR 352
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL-YPDTVTFLGVLTAC 232
+++ +F + + +SWNS+I G S++G +A+ +Y +L PD TF ++A
Sbjct: 353 EAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISAT 412
Query: 233 AH 234
A
Sbjct: 413 AE 414
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 119/242 (49%), Gaps = 5/242 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQN-ELIAEAISLFGEMMAHGFSP 119
+IS Y+ G + +A +FD MP R+ +++ ++ S Y +N + + A L M P
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKP 197
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ TF L + + G L+ +K Y +++++ S++ MY+ CG+++ + RIF
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ RD ++WN+MI+G + + + L + ML G+ P T+ VL C+ G
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 240 KGWELFNSMVNSYGLQP-GFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G + ++ S L D+ +++++ G +++A R+ PN W +++
Sbjct: 318 LGKLIHARIIVSDSLADLPLDN--ALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIIS 374
Query: 299 VC 300
C
Sbjct: 375 GC 376
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 115/239 (48%), Gaps = 11/239 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF-SPLNGT 123
Y S G + +A +F + + + ++W S+ISG +N +A+ ++ ++ P T
Sbjct: 345 YCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYT 404
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
F+ A G+ LHG K YE + + +L+SMY K E + + ++F M
Sbjct: 405 FSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMK 464
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
RD + W MI+G S G + A+ + M D + V+ AC+ ++ +G E
Sbjct: 465 ERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-E 523
Query: 244 LFNSMVNSYGLQPGFDHYISI----INLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+F+ + ++ GFD +S+ +++ G+ GK + AE + L P+ W +++G
Sbjct: 524 VFHCL----AIRTGFDCVMSVCGALVDMYGKNGKYETAET-IFSLASNPDLKCWNSMLG 577
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 28/235 (11%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG---- 116
+IS Y+ + +A +FD MP R+ + + + + E ++ SL +++ G
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVF---EYVSMGSSLHSQIIKLGSFQM 84
Query: 117 --FSPLN---GTFAVLFGAMGSVAYLDQGRQLH------GMQVKTIYEYDLILENSLVSM 165
F PLN + L S+ L + RQ+H G T Y N+L+SM
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPY---ANNNLISM 141
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR-ASEALTVYETMLEFGLYPDTVT 224
Y +CG ++ + ++F M +R+ +S+N++ S + AS A + M + P++ T
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF-DHYISIINLLGRAGKVKDAE 278
F ++ CA V L S +NS ++ G+ D+ + ++LG D E
Sbjct: 202 FTSLVQVCAVLEDV-----LMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLE 251
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 176/320 (55%), Gaps = 5/320 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y + + A +FD M +R+ ++W S+++ V+N + F EM+ F P
Sbjct: 154 LIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPD 213
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T VL A G L G+ +H + E + L +LV MYAK G ++ + +F
Sbjct: 214 ETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFE 271
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVD 239
M ++ +W++MI+GL+ +G A EAL ++ M+ E + P+ VTFLGVL AC+H GLVD
Sbjct: 272 RMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVD 331
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
G++ F+ M + ++P HY +++++LGRAG++ +A +F+ ++P EP+ +W L+
Sbjct: 332 DGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
Query: 300 CGLSKTDAD--VASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
C + + D + + KRL+EL+P + V + N +A E +R+ M+ ++
Sbjct: 392 CSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMK 451
Query: 358 KAPGCSWILVKGRVHVFSSG 377
K G S + + G H F SG
Sbjct: 452 KIAGESCLELGGSFHRFFSG 471
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 8/219 (3%)
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
DS P W + GY ++ E+I ++ EM G P TF L A S L
Sbjct: 75 DSTPS----TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLT 130
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
GRQ+ +K +++D+ + N+L+ +Y C + D+ ++F M R+ +SWNS++ L
Sbjct: 131 AGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALV 190
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
++G+ + + M+ PD T + +L+AC G + G +L +S V L+
Sbjct: 191 ENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLG-KLVHSQVMVRELELNC 247
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+++++ ++G ++ A V V+ N W A++
Sbjct: 248 RLGTALVDMYAKSGGLEYA-RLVFERMVDKNVWTWSAMI 285
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDS 86
L S G + G+L +Q + + + ++ T ++ Y +G + A +F+ M D++
Sbjct: 220 LLSACGGNLSLGKLVHSQVMVRELELNCRLG-TALVDMYAKSGGLEYARLVFERMVDKNV 278
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQG-RQLH 144
W++MI G Q EA+ LF +MM P TF + A +D G + H
Sbjct: 279 WTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFH 338
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-DKISWNSMIMGLSDH 200
M+ + +I ++V + + G ++++Y M + D + W +++ S H
Sbjct: 339 EMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 187/341 (54%), Gaps = 6/341 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
S + Y + G LE ++++FD + +A ++ G++ A + F MP D +
Sbjct: 125 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 184
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG-----RQ 142
+WT++I+G+ + L A+A+ +FGEM+ + + + A + S A DQG +Q
Sbjct: 185 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQ 244
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+HG + L +L+ MY K G+++ + IF + + +WN++I L+ +GR
Sbjct: 245 IHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGR 304
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
+AL ++E M ++P+ +T L +LTACA + LVD G +LF+S+ + Y + P +HY
Sbjct: 305 PKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYG 364
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+++L+GRAG + DA F+ LP EP+ ++ GAL+G C + + + ++ + K+L+ L P
Sbjct: 365 CVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHE-NTELGNTVGKQLIGLQP 423
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
+ +VAL A + E +RK M G+RK P S
Sbjct: 424 QHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 34/185 (18%)
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL 143
+ + ++I Y+ +++LF M+A P N TF L A S + G L
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 144 HGMQVKTIYEYDLILENSLVSMYAKC-------------------------------GEI 172
HG +K + +D ++ S V Y + GE+
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG---LYPDTVTFLGVL 229
D ++ F M D +SW ++I G S G ++AL V+ M++ + P+ TF+ VL
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 230 TACAH 234
++CA+
Sbjct: 229 SSCAN 233
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 184/334 (55%), Gaps = 10/334 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +++ YL V + +F + + ++WTS+ISG VQN A+ F +MM
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + T + ++A ++GRQ+HG+ K ++ D + L+ +Y KCG D + +
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLV 425
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F ++ D IS N+MI + +G EAL ++E M+ GL P+ VT L VL AC ++ LV
Sbjct: 426 FDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLV 485
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
++G ELF+S + DHY +++LLGRAG++++AE + + P+ +W L+
Sbjct: 486 EEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLS 543
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAN---DRHIELTSLRKEMRIKG 355
C + + ++A R T+++LE++P + + + N+YA+ +R IE+ S K+M++K
Sbjct: 544 ACKVHRK-VEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLK- 601
Query: 356 VRKAPGCSWILVKGRVHVFSSGDRL-EPHVEDIL 388
K P SW+ + H F +GD P+ E IL
Sbjct: 602 --KNPAMSWVEINKETHTFMAGDLFSHPNSEQIL 633
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 132/257 (51%), Gaps = 10/257 (3%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQE-----LFDTVPIRNKIAWTCMISGYLSAGQVFKACDL 77
D+ +L+S+ + ++AQ + + + N + ++ Y+ G+ +A +
Sbjct: 164 DEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLV 223
Query: 78 FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
D + ++D + T++I GY Q EA+ F M+ P T+A + + G++ +
Sbjct: 224 LDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDI 283
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
G+ +HG+ VK+ +E L + SL++MY +C +DDS R+F + Y +++SW S+I GL
Sbjct: 284 GNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGL 343
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+GR AL + M+ + P++ T L C++ + ++G ++ + +V YG
Sbjct: 344 VQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI-HGIVTKYGFDR- 401
Query: 258 FDHYI--SIINLLGRAG 272
D Y +I+L G+ G
Sbjct: 402 -DKYAGSGLIDLYGKCG 417
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 118/244 (48%), Gaps = 3/244 (1%)
Query: 55 KIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA 114
+I+ + ++ L G + A +FD M +R + W S+I+ +++ EA+ ++ M+
Sbjct: 99 EISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMIT 158
Query: 115 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEID 173
+ P T + +F A ++ + ++ HG+ V E ++ + ++LV MY K G+
Sbjct: 159 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTR 218
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
++ + + +D + ++I+G S G +EA+ +++ML + P+ T+ VL +C
Sbjct: 219 EAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 278
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
+ + G + MV S G + S++ + R V D+ V + PN W
Sbjct: 279 NLKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLR-VFKCIEYPNQVSW 336
Query: 294 GALV 297
+L+
Sbjct: 337 TSLI 340
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
+ LV KCG+ID + ++F M+ R ++WNS+I L H R+ EA+ +Y M+ +
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL 162
Query: 220 PDTVTFLGVLTAC-----------AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
PD T V A +H V G E+ N V S +++++
Sbjct: 163 PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGS-----------ALVDMY 211
Query: 269 GRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ GK ++A+ + R+ + I +VG
Sbjct: 212 VKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 12/199 (6%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTCMISGYLSAGQVFKACDLFDSM 81
+L+S + G E+ +++ V R+K A + +I Y G A +FD++
Sbjct: 370 TLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTL 429
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+ D I+ +MI Y QN EA+ LF M+ G P + T + A + +++G
Sbjct: 430 SEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGC 489
Query: 142 QLHGMQVKTIYEYDLILENS----LVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGL 197
+L + + ++L N +V + + G ++++ + + + D + W +++
Sbjct: 490 EL----FDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSAC 545
Query: 198 SDHGRASEALTVYETMLEF 216
H + A + +LE
Sbjct: 546 KVHRKVEMAERITRKILEI 564
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 166/299 (55%), Gaps = 8/299 (2%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
++ Y G + KA ++FD +P +D ++W SM++GY+ + L+ EA+ +F M+ +G
Sbjct: 234 NALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIE 293
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + + V GRQLHG ++ E++L + N+L+ +Y+K G++ + I
Sbjct: 294 PDK---VAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFI 350
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M RD +SWN++I S H + S L +E M PD +TF+ VL+ CA+ G+V
Sbjct: 351 FDQMLERDTVSWNAII---SAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMV 407
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR-LPVEPNHAIWGALV 297
+ G LF+ M YG+ P +HY ++NL GRAG +++A +++ + +E +WGAL+
Sbjct: 408 EDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALL 467
Query: 298 GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
C L + D+ A +RL EL+P N L IY+ R ++ +R+ M +G+
Sbjct: 468 YACYL-HGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
FA L S+ +D G ++H + + +L + + LV +YA CG + ++ +F M+
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 184 YRDK--ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
RD +WNS+I G ++ G+ +A+ +Y M E G+ PD TF VL AC G V G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 242 WELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ +V G G+D Y+ +++ + + G + A +P ++ W +++
Sbjct: 215 EAIHRDLVKE-GF--GYDVYVLNALVVMYAKCGDIVKARNVFDMIP-HKDYVSWNSML 268
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 156/279 (55%), Gaps = 2/279 (0%)
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
D + I W +MI+ YV E +AI+LF M++ F P + T L A + L++G+
Sbjct: 495 DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQM 554
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGR 202
+H +T +E +L L +L+ MYAKCG ++ S +F +D + WN MI G HG
Sbjct: 555 IHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGD 614
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
A+ +++ M E + P TFL +L+AC HAGLV++G +LF M + Y ++P HY
Sbjct: 615 VESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYS 673
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+++LL R+G +++AE V+ +P P+ IWG L+ C ++ + ++ R +R + DP
Sbjct: 674 CLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC-MTHGEFEMGIRMAERAVASDP 732
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 361
N ++ L N+Y+A + E R+ MR GV K G
Sbjct: 733 QNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAG 771
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 7/287 (2%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
RN + Y G + AC +FD MPDRD +AWT++ISG+VQN + +M
Sbjct: 159 RNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 113 MAHGF---SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
+ G P T F A ++ L +GR LHG VK +++S+ S Y+K
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
G ++Y F + D SW S+I L+ G E+ ++ M G++PD V ++
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 289
LV +G + F+ V + S++++ + + AE+ R+ E N
Sbjct: 339 NELGKMMLVPQG-KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGN 397
Query: 290 HAIWGALVGVCGLSKTDADVAS--RATKRL-LELDPLNAPGHVALCN 333
W ++ G K R + L +E+D +A ++ C+
Sbjct: 398 KEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCS 444
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 117/248 (47%), Gaps = 8/248 (3%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
+K + M S Y +G +A F + D D +WTS+I+ ++ + E+ +F EM
Sbjct: 264 SKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ 323
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P + L +G + + QG+ HG ++ + D + NSL+SMY K +
Sbjct: 324 NKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLS 383
Query: 174 DSYRIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+ ++F ++ +K +WN+M+ G + + ++ + G+ D+ + V+++C
Sbjct: 384 VAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSC 443
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN-LLGRAGKVKDAE-EFVLRLPVEPNH 290
+H G V L ++ Y ++ D IS++N L+ GK+ D + + + N
Sbjct: 444 SHIGAV-----LLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNV 498
Query: 291 AIWGALVG 298
W A++
Sbjct: 499 ITWNAMIA 506
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS Y S G+ + +F + RD W S+I + N A ++ F M+ G SP
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPD 124
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ T ++ A + + G +HG+ +K ++ + + S V Y+KCG + D+ +F
Sbjct: 125 HFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVF 184
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL---YPDTVTFLGVLTACAHAG 236
M RD ++W ++I G +G + L M G P+ T AC++ G
Sbjct: 185 DEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLG 244
Query: 237 LVDKG 241
+ +G
Sbjct: 245 ALKEG 249
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 42/265 (15%)
Query: 21 NFDDQSLN--SMINGYVQAGQLEKAQELF----DTVPIRNKIAWTCMISGYLSAGQVFKA 74
NF S+ +++ V G LE+ Q + +T N +I Y G + K+
Sbjct: 528 NFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKS 587
Query: 75 CDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
+LFD+ +D++ W MISGY + + AI+LF +M P TF L A
Sbjct: 588 RELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHA 647
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
++QG++L +++YD + N+ + ++ ++
Sbjct: 648 GLVEQGKKL----FLKMHQYD----------------------VKPNLKH-----YSCLV 676
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
LS G EA + T++ PD V + +L++C G + G + V S
Sbjct: 677 DLLSRSGNLEEAES---TVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQ 733
Query: 255 QPGFDHYISIINLLGRAGKVKDAEE 279
G+ YI + N+ AGK ++AE
Sbjct: 734 NDGY--YIMLANMYSAAGKWEEAER 756
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 192/334 (57%), Gaps = 9/334 (2%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIA-WTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
++I+ Y + ++ A + F+ +++ IA +I+G++ G V +A ++FD D+D
Sbjct: 345 TIIHFYAVSNDIKLALQQFEA-SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQGRQLHG- 145
+W +MISGY Q+ A+ LF EM++ P T +F A+ S+ L++G++ H
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF---SNMAYRDKISWNSMIMGLSDHGR 202
+ TI D L +++ MYAKCG I+ + IF N++ WN++I G + HG
Sbjct: 464 LNFSTIPPND-NLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
A AL +Y + + P+++TF+GVL+AC HAGLV+ G F SM + +G++P HY
Sbjct: 523 AKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYG 582
Query: 263 SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDP 322
+++LLG+AG++++A+E + ++PV+ + IWG L+ + + ++A A L +DP
Sbjct: 583 CMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSA-SRTHGNVEIAELAATELAAIDP 641
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+ V L N+YA R ++ +R+EMR + V
Sbjct: 642 SHGGCKVMLSNVYADAGRWEDVALVREEMRTRDV 675
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 36/265 (13%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS++N Y + L A+ +F + ++ M+ GY+ + +++ A LFD MP+R +
Sbjct: 80 NSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCV 139
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
++T++I GY QN +EA+ LF EM G T A + A + + R L +
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG------ 201
+K E + + +L+ MY C + D+ ++F M R+ ++WN M+ G S G
Sbjct: 200 IKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAE 259
Query: 202 -------------------------RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+ EAL Y ML G+ P V + +L+A A +
Sbjct: 260 ELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSV 319
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHY 261
KG +L ++V + GFD Y
Sbjct: 320 GSSKGLQLHGTIV-----KRGFDCY 339
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 33/282 (11%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
++++ Y L+ A++LFD +P RN + W M++GY AG + +A +LFD + ++D +
Sbjct: 212 TNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIV 271
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +MI G ++ + EA+ + EM+ G P L A +G QLHG
Sbjct: 272 SWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTI 331
Query: 148 VKTIYE-YDLIL------------------------------ENSLVSMYAKCGEIDDSY 176
VK ++ YD + N+L++ + K G ++ +
Sbjct: 332 VKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAR 391
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHA 235
+F +D SWN+MI G + AL ++ M+ + PD +T + V +A +
Sbjct: 392 EVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSL 451
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
G +++G + + +N + P + +II++ + G ++ A
Sbjct: 452 GSLEEG-KRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETA 492
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 123 TFAVLFGAMGSVAYLDQ---GRQLHGMQVKTIYEYDLILENSLVSMYAKC---------- 169
T L A+GS A + GRQ+H +K+ + + + NS+++MYAKC
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 170 ---GEID------------------DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
++D D+ ++F M R +S+ ++I G + + + SEA+
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 209 VYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE--LFNSMVNSYGLQPGFDHYISIIN 266
++ M G+ + VT V++AC+H G + W+ + S+ L+ ++++
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGI---WDCRMLQSLAIKLKLEGRVFVSTNLLH 216
Query: 267 LLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
+ +KDA + +P E N W ++ G SK
Sbjct: 217 MYCLCLCLKDARKLFDEMP-ERNLVTWNVMLN--GYSK 251
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 202/430 (46%), Gaps = 43/430 (10%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF------------- 47
+Y G MD A L G + D +M+ G+ QAG+ KA E +
Sbjct: 160 LYMKCGKMDEA-EVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRV 218
Query: 48 -------------DTVPIR-------------NKIAWTCMISGYLSAGQVFKACDLFDSM 81
DT R N + T ++ Y G + A +F M
Sbjct: 219 VMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM 278
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+ +++W S+ISG+ QN L +A EM + GF P T + A V L GR
Sbjct: 279 MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGR 338
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
+H +K + D + +L+ MY+KCG + S IF ++ +D + WN+MI HG
Sbjct: 339 LVHCYILKR-HVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHG 397
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
E ++++ M E + PD TF +L+A +H+GLV++G F+ M+N Y +QP HY
Sbjct: 398 NGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHY 457
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELD 321
+ +I+LL RAG+V++A + + ++ IW AL+ C ++ + V A ++L+L+
Sbjct: 458 VCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGC-INHRNLSVGDIAANKILQLN 516
Query: 322 PLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
P + + N +A ++ E+ +RK MR + K PG S I V G + F D L
Sbjct: 517 PDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMED-LS 575
Query: 382 PHVEDILLQI 391
H +LQ+
Sbjct: 576 HHEHYHMLQV 585
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 132/270 (48%), Gaps = 7/270 (2%)
Query: 69 GQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
G++ A +FD +P R + SMI Y + + E + L+ +M+A P + TF +
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
A S L++G + V Y+ D+ + +S++++Y KCG++D++ +F MA RD I
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI 183
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
W +M+ G + G++ +A+ Y M G D V LG+L A G G + +
Sbjct: 184 CWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 249 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD 308
+ GL S++++ + G ++ A R+ + + WG+L+ G ++
Sbjct: 244 YRT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVS-WGSLIS--GFAQN--G 297
Query: 309 VASRATKRLLELDPLN-APGHVALCNIYAA 337
+A++A + ++E+ L P V L + A
Sbjct: 298 LANKAFEAVVEMQSLGFQPDLVTLVGVLVA 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 158 LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG 217
+ L++ + GEI + ++F + R +NSMI+ S E L +Y+ M+
Sbjct: 52 ISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEK 111
Query: 218 LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
+ PD+ TF + AC +++KG ++ V+ +G + S++NL + GK+ +A
Sbjct: 112 IQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVD-FGYKNDVFVCSSVLNLYMKCGKMDEA 170
Query: 278 E 278
E
Sbjct: 171 E 171
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 186/349 (53%), Gaps = 22/349 (6%)
Query: 33 GYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSM 92
G + G ++K L+++ ++ T ++ Y G + A +FD MP+R S+ W +M
Sbjct: 130 GRIVHGMVKKLGFLYES-----ELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAM 184
Query: 93 ISGYVQ-----NELIAEAISLFGEM--MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
I GY N +A+ LF G P + T + A+ L+ G +HG
Sbjct: 185 IGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHG 244
Query: 146 MQVKTIY--EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRA 203
K + E D+ + +LV MY+KCG +++++ +F M ++ +W SM GL+ +GR
Sbjct: 245 YIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRG 304
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+E + M E G+ P+ +TF +L+A H GLV++G ELF SM +G+ P +HY
Sbjct: 305 NETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGC 364
Query: 264 IINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPL 323
I++LLG+AG++++A +F+L +P++P+ + +L C + + + K LLE++
Sbjct: 365 IVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIY-GETVMGEEIGKALLEIERE 423
Query: 324 N-------APGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
+ +VAL N+ A + +E+ LRKEM+ + ++ PG S++
Sbjct: 424 DEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 176/313 (56%), Gaps = 7/313 (2%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELI---AEAISLFG 110
++ ++ Y + G++ +A LF+ + + D W ++++ Y +E I E + LF
Sbjct: 149 DRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFM 208
Query: 111 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 170
M P + L + ++ +G H +K + + SL+ +Y+KCG
Sbjct: 209 RMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCG 265
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
+ + ++F M+ RD +N+MI GL+ HG E + +Y++++ GL PD+ TF+ ++
Sbjct: 266 CLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTIS 325
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 290
AC+H+GLVD+G ++FNSM YG++P +HY +++LLGR+G++++AEE + ++PV+PN
Sbjct: 326 ACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNA 385
Query: 291 AIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKE 350
+W + +G + D + A K LL L+ N+ +V L NIYA +R ++ R+
Sbjct: 386 TLWRSFLG-SSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTREL 444
Query: 351 MRIKGVRKAPGCS 363
M+ V K+PG S
Sbjct: 445 MKDHRVNKSPGIS 457
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAE---AISLFGEMMA---HGFSPLNGTFAVL 127
A + +P+ + ++IS V N + A SL+ ++++ + P T+ L
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 128 FGAMG-SVAYLDQGRQLHGMQVKTI--YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
F A G + GR LH +K + +D ++ +LV YA CG++ ++ +F +
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE 178
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
D +WN+++ ++ V + + P+ ++ + ++ +CA+ G +G
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRG 235
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 178/319 (55%), Gaps = 2/319 (0%)
Query: 57 AWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
A +I+ Y G + K+ +F+ M +RD ++W ++ISGY QN + +A+ LF EM
Sbjct: 383 ALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKT 442
Query: 117 FSPLNG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
++ T L A S L G+ +H + +++ +++ +LV MY+KCG ++ +
Sbjct: 443 VQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAA 502
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
R F +++++D +SW +I G HG+ AL +Y L G+ P+ V FL VL++C+H
Sbjct: 503 QRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHN 562
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGA 295
G+V +G ++F+SMV +G++P +H +++LL RA +++DA +F P+ + G
Sbjct: 563 GMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGI 622
Query: 296 LVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 355
++ C + +V + ++EL P +A +V L + +AA R +++ +MR G
Sbjct: 623 ILDACR-ANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLG 681
Query: 356 VRKAPGCSWILVKGRVHVF 374
++K PG S I + G+ F
Sbjct: 682 LKKLPGWSKIEMNGKTTTF 700
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 11/277 (3%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIA-WTCMISGYLSAGQVFKACDLFDSMPDR 84
+L M++G ++ QL+ + IA M++ Y V A DLFD M R
Sbjct: 149 TLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR 208
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D ++W +MISGY ++E + L M G P TF G++ L+ GR LH
Sbjct: 209 DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLH 268
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRAS 204
VKT ++ D+ L+ +L++MY KCG+ + SYR+ + +D + W MI GL GRA
Sbjct: 269 CQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAE 328
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD----H 260
+AL V+ ML+ G + V+ +CA G D G + V+ Y L+ G+
Sbjct: 329 KALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG-----ASVHGYVLRHGYTLDTPA 383
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
S+I + + G + D + E + W A++
Sbjct: 384 LNSLITMYAKCGHL-DKSLVIFERMNERDLVSWNAII 419
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 118/222 (53%), Gaps = 2/222 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I+ YL G+ + + +++P++D + WT MISG ++ +A+ +F EM+ G
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ A + + + D G +HG ++ Y D NSL++MYAKCG +D S I
Sbjct: 344 LSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVI 403
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGL 237
F M RD +SWN++I G + + +AL ++E M + D+ T + +L AC+ AG
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
+ G +L + +V ++P +++++ + G ++ A+
Sbjct: 464 LPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 121/268 (45%), Gaps = 14/268 (5%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y G + A +F+ M +RD + WT+MI Y + ++ EA SL EM G P
Sbjct: 87 LVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPG 146
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T L + V + Q + LH V ++ D+ + NS++++Y KC + D+ +F
Sbjct: 147 PVT---LLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
M RD +SWN+MI G + G SE L + M GL PD TF L+ ++
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLR-LPVEPNHAIWGALVGV 299
G L +V + G ++I + + GK EE R L PN + V +
Sbjct: 264 GRMLHCQIVKT-GFDVDMHLKTALITMYLKCGK----EEASYRVLETIPNKDVVCWTVMI 318
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPG 327
GL + RA K L+ + G
Sbjct: 319 SGLMRL-----GRAEKALIVFSEMLQSG 341
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLV 163
+ +S F M+A+ P TF L A S+ L G +H + + D + +SLV
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLV 88
Query: 164 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 223
++YAK G + + ++F M RD + W +MI S G EA ++ M G+ P V
Sbjct: 89 NLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPV 148
Query: 224 TFLGVLTA--------CAHAGLVDKGWE----LFNSMVNSY 252
T L +L+ C H V G++ + NSM+N Y
Sbjct: 149 TLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLY 189
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 165/308 (53%), Gaps = 3/308 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +++ Y + + A + F+SM R+ ++W +MI G+ QN EA+ LFG+M+
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P TFA + + + + + +Q+ M K L + NSL+S Y++ G + ++
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F ++ D +SW S+I L+ HG A E+L ++E+ML+ L PD +TFL VL+AC+H GLV
Sbjct: 400 FHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLV 458
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+G F M Y ++ +HY +I+LLGRAG + +A + + +P EP+ A G
Sbjct: 459 QEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTG 518
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR- 357
C + + + A K+LLE++P + L N Y + + LRK R
Sbjct: 519 GCNIHEKRESMKWGA-KKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNP 577
Query: 358 KAPGCSWI 365
K PGCSW+
Sbjct: 578 KTPGCSWL 585
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 128/242 (52%), Gaps = 8/242 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G + +A +F+++ DRD + W +++S YV N +I EA L ++M +
Sbjct: 181 TSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLL-KLMGSDKN 239
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
G + F ++ S ++QG+Q+H + K Y++D+ + +L++MYAK + D+
Sbjct: 240 RFRGDY-FTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDAREC 298
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F +M R+ +SWN+MI+G + +G EA+ ++ ML L PD +TF VL++CA +
Sbjct: 299 FESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAI 358
Query: 239 DKGWEL--FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGAL 296
WE+ +MV G S+I+ R G + +A EP+ W ++
Sbjct: 359 ---WEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEA-LLCFHSIREPDLVSWTSV 414
Query: 297 VG 298
+G
Sbjct: 415 IG 416
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 18/261 (6%)
Query: 44 QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ----- 98
Q +++++ ++NK ++ Y + A LFD MP R+ + W +I G +Q
Sbjct: 65 QGIYNSLFLQNK-----LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDT 119
Query: 99 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 158
N ++ S + +F L + G QLH + VK E
Sbjct: 120 NHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFP 179
Query: 159 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETM--LEF 216
SLV Y KCG I ++ R+F + RD + WN+++ +G EA + + M +
Sbjct: 180 STSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKN 239
Query: 217 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 276
D TF +L+AC +++G ++ ++++ Q +++N+ ++ + D
Sbjct: 240 RFRGDYFTFSSLLSACR----IEQGKQI-HAILFKVSYQFDIPVATALLNMYAKSNHLSD 294
Query: 277 AEEFVLRLPVEPNHAIWGALV 297
A E + V N W A++
Sbjct: 295 ARECFESMVVR-NVVSWNAMI 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
S+ +L +Q HG VK L L+N L+ Y K E DD+ ++F M R+ ++WN
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 192 SMIMGL------SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 245
+I G+ ++H RA +L + D V+F+G++ C + + G +L
Sbjct: 107 ILIHGVIQRDGDTNH-RAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLH 165
Query: 246 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
MV GL+ S+++ G+ G + +A V ++ + +W ALV
Sbjct: 166 CLMVKQ-GLESSCFPSTSLVHFYGKCGLIVEARR-VFEAVLDRDLVLWNALVS 216
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 178/349 (51%), Gaps = 7/349 (2%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWT-CMISGYLSAGQVFKACDLFDSM 81
D+ + S++ + LE Q + +KI + +IS Y GQ+ KA LF+
Sbjct: 388 DEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERS 447
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS--PLNGTFAVLFGAMGSVAYLDQ 139
++ I+W ++ISG+ N E + F ++ P T + L S + L
Sbjct: 448 LRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLML 507
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G Q H ++ + ++ N+L++MY++CG I +S +F+ M+ +D +SWNS+I S
Sbjct: 508 GSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSR 567
Query: 200 HGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
HG A+ Y+TM + G + PD TF VL+AC+HAGLV++G E+FNSMV +G+
Sbjct: 568 HGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNV 627
Query: 259 DHYISIINLLGRAGKVKDAEEFVL--RLPVEPNHAIWGALVGVCGLSKTDADVASRATKR 316
DH+ +++LLGRAG + +AE V + +W AL C + D + K
Sbjct: 628 DHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACA-AHGDLKLGKMVAKL 686
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
L+E + + +V L NIYA E R+ + + G K GCSW+
Sbjct: 687 LMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 128/242 (52%), Gaps = 13/242 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ Y + G L ++ FD + + +WT ++S G + A ++FD MP+RD +
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDV 155
Query: 88 A-WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
A W +MI+G ++ ++ LF EM G FA + +M LD G+Q+H +
Sbjct: 156 AIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL-SMCDYGSLDFGKQVHSL 214
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF--SNMAYRDKISWNSMIMGLSDHGRAS 204
+K + + N+L++MY C + D+ +F +++A RD++++N +I GL+ R
Sbjct: 215 VIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-D 273
Query: 205 EALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISI 264
E+L V+ MLE L P +TF+ V+ +C+ A + V+ ++ G++ Y +
Sbjct: 274 ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM--------GHQVHGLAIKTGYEKYTLV 325
Query: 265 IN 266
N
Sbjct: 326 SN 327
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 117/239 (48%), Gaps = 11/239 (4%)
Query: 61 MISGYLSAGQVFKACDLFDS--MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
+I+ Y + V AC +F+ + RD + + +I G + E++ +F +M+
Sbjct: 230 LITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLR 288
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P + TF MGS + G Q+HG+ +KT YE ++ N+ ++MY+ + ++++
Sbjct: 289 PTDLTFV---SVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKV 345
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F ++ +D ++WN+MI + A++VY+ M G+ PD TF +L ++
Sbjct: 346 FESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL 405
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
E+ + + +GL + ++I+ + G+++ A + + + N W A++
Sbjct: 406 ----EMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAII 459
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 168/325 (51%), Gaps = 11/325 (3%)
Query: 45 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNE 100
EL DT RN I+W +ISG + GQ A +LF+ + DS W S+ISG+ Q
Sbjct: 291 ELKDT---RNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLG 347
Query: 101 LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN 160
+ EA F M++ P L A + L G+++HG +K E D+ +
Sbjct: 348 KVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLT 407
Query: 161 SLVSMYAKCGEIDDSYRIFSNM--AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
SL+ MY KCG + RIF +D + WN MI G HG A+ ++E + E +
Sbjct: 408 SLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKV 467
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
P TF VL+AC+H G V+KG ++F M YG +P +H +I+LLGR+G++++A+
Sbjct: 468 EPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAK 527
Query: 279 EFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAAN 338
E + ++ + +L+G C D + A +L EL+P N V L +IYAA
Sbjct: 528 EVIDQMSEPSSSVY-SSLLGSCR-QHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAAL 585
Query: 339 DRHIELTSLRKEMRIKGVRKAPGCS 363
+R ++ S+R+ + K + K PG S
Sbjct: 586 ERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 133/255 (52%), Gaps = 13/255 (5%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++S Y G+ A +F+ +P + + + + ISG ++N ++ S+F M FS
Sbjct: 168 TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLM--RKFS 225
Query: 119 ---PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
P + TF A S+ L GRQLHG+ +K ++++ ++ +L+ MY+KC +
Sbjct: 226 SEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSA 285
Query: 176 YRIFSNMA-YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
Y +F+ + R+ ISWNS+I G+ +G+ A+ ++E + GL PD+ T+ +++ +
Sbjct: 286 YIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQ 345
Query: 235 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHA 291
G V + ++ F M+ S + P S+++ +K+ +E V++ E +
Sbjct: 346 LGKVIEAFKFFERML-SVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIF 404
Query: 292 IWGALVGV---CGLS 303
+ +L+ + CGLS
Sbjct: 405 VLTSLIDMYMKCGLS 419
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 14/204 (6%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++S Y+ QV A + D MP+R + + +SG ++N +A +FG+ G
Sbjct: 70 TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSG 129
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ T A + G G + + G QLH + +K+ +E ++ + SLVSMY++CGE + R+
Sbjct: 130 MNSVTVASVLGGCGDI---EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARM 186
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL-YPDTVTFLGVLTACAHA-- 235
F + ++ +++N+ I GL ++G + +V+ M +F P+ VTF+ +TACA
Sbjct: 187 FEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLN 246
Query: 236 --------GLVDKGWELFNSMVNS 251
GLV K F +MV +
Sbjct: 247 LQYGRQLHGLVMKKEFQFETMVGT 270
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
SP TF L + + + QGR LH VKT + D+ +LVSMY K ++ D+ +
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
+ M R S N+ + GL ++G +A ++ G ++VT VL C G
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GD 144
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLP 285
++ G +L + ++ GF+ + S++++ R G+ A ++P
Sbjct: 145 IEGGMQL-----HCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP 191
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 160/287 (55%), Gaps = 3/287 (1%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+F+ ++D +AW S+ISG+ QN I EA+ LF M + +P T A LF A S+
Sbjct: 399 VFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGS 458
Query: 137 LDQGRQLHGMQVKT--IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
L G LH VK + + + +L+ YAKCG+ + IF + ++ I+W++MI
Sbjct: 459 LAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G G +L ++E ML+ P+ TF +L+AC H G+V++G + F+SM Y
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNF 578
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRAT 314
P HY ++++L RAG+++ A + + ++P++P+ +GA + CG+ + D+
Sbjct: 579 TPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGM-HSRFDLGEIVI 637
Query: 315 KRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPG 361
K++L+L P +A +V + N+YA++ R + +R M+ +G+ K G
Sbjct: 638 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAG 684
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 148/282 (52%), Gaps = 12/282 (4%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQEL---FDTVPIRNKIAWTCMISGYLSAGQVFKACDLF 78
+DD + + + L+ +++ VP + + T ++ Y G++ A +F
Sbjct: 140 YDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVF 199
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ + R+ + WTSMI+GYV+N+L E + LF M + T+ L A ++ L
Sbjct: 200 NDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALH 259
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
QG+ HG VK+ E L SL+ MY KCG+I ++ R+F+ ++ D + W +MI+G +
Sbjct: 260 QGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG- 257
+G +EAL++++ M + P+ VT VL+ C GL++ EL S V+ ++ G
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIEN-LELGRS-VHGLSIKVGI 374
Query: 258 FDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+D + +++++ + + +DA ++V + E + W +++
Sbjct: 375 WDTNVANALVHMYAKCYQNRDA-KYVFEMESEKDIVAWNSII 415
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 13/246 (5%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y+ G + A +F+ D + WT+MI GY N + EA+SLF +M
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T A + G + L+ GR +HG+ +K + +D + N+LV MYAKC + D+ +
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIK-VGIWDTNVANALVHMYAKCYQNRDAKYV 399
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + +D ++WNS+I G S +G EAL ++ M + P+ VT + +ACA G +
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISI------INLLGRAGKVKDAEEFVLRLPVEPNHAI 292
G S +++Y ++ GF S+ ++ + G + A + E N
Sbjct: 460 AVG-----SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKNTIT 513
Query: 293 WGALVG 298
W A++G
Sbjct: 514 WSAMIG 519
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++S Y G A +FD +P+ D W M+ Y N+ E + L+ +M HGF
Sbjct: 80 TKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFR 139
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ F+ A + LD G+++H VK + +D ++ L+ MYAKCGEI ++++
Sbjct: 140 YDDIVFSKALKACTELQDLDNGKKIHCQLVK-VPSFDNVVLTGLLDMYAKCGEIKSAHKV 198
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F+++ R+ + W SMI G + E L ++ M E + + T+ ++ AC +
Sbjct: 199 FNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSAL 258
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH---AIWGA 295
+G +V S G++ S++++ + G + +A R+ E +H +W A
Sbjct: 259 HQGKWFHGCLVKS-GIELSSCLVTSLLDMYVKCGDISNAR----RVFNEHSHVDLVMWTA 313
Query: 296 LV 297
++
Sbjct: 314 MI 315
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G A +FD++ ++++I W++MI GY + ++ LF EM+
Sbjct: 484 TALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQK 543
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENS----LVSMYAKCGEIDD 174
P TF + A G +++G++ K +Y+ +V M A+ GE++
Sbjct: 544 PNESTFTSILSACGHTGMVNEGKKYFSSMYK---DYNFTPSTKHYTCMVDMLARAGELEQ 600
Query: 175 SYRIFSNMAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
+ I M + D + + + G H R V + ML+ L+PD ++
Sbjct: 601 ALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD--LHPDDASY 650
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 9/181 (4%)
Query: 128 FGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 187
F + +D RQ HG+ D+ + LVS+Y G D+ +F + D
Sbjct: 48 FLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDF 107
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
W M+ + + E + +Y+ +++ G D + F L AC +D G ++
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 248 MVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKT 305
+V P FD+ + ++++ + G++K A + + + N W +++ G K
Sbjct: 168 LVKV----PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIA--GYVKN 220
Query: 306 D 306
D
Sbjct: 221 D 221
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 154/290 (53%), Gaps = 2/290 (0%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVA 135
LF+ + + I+W S+ISG VQ+ + A +F +MM G P T A L +
Sbjct: 404 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 463
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
L+ G++LHG ++ +E + + +L+ MYAKCG + +F ++ +WNSMI
Sbjct: 464 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G S G AL+ Y M E GL PD +TFLGVL+AC H G VD+G F +M+ +G+
Sbjct: 524 GYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS 583
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 315
P HY ++ LLGRA +A + ++ ++P+ A+WGAL+ C + + + +V +
Sbjct: 584 PTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHR-ELEVGEYVAR 642
Query: 316 RLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWI 365
++ LD N +V + N+YA ++ +R M+ G G S I
Sbjct: 643 KMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 24/329 (7%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +++ YL G V A LFD MP+RD++ W ++I GY +N +A LF M+ GFS
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T L G ++ QGR +HG+ K+ E D ++N+L+S Y+KC E+ + +
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M + +SWN+MI S G EA+TV++ M E + VT + +L+ AH
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS--AHV--- 263
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
E + +V G+ S++ R G + AE L + + + +
Sbjct: 264 --SHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAER--LYASAKQDSIVGLTSIV 319
Query: 299 VCGLSKTDADVA----SRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIK 354
C K D D+A S+ + +++D + G + C HI++ M +
Sbjct: 320 SCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCK----KSSHIDIG-----MSLH 370
Query: 355 GVRKAPG-CSWIL-VKGRVHVFSSGDRLE 381
G G C+ L V G + ++S D +E
Sbjct: 371 GYAIKSGLCTKTLVVNGLITMYSKFDDVE 399
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 22/287 (7%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM----MA 114
T ++ Y G + A L+ S + TS++S Y + + A+ F + M
Sbjct: 285 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 344
Query: 115 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
L G +L G S +++D G LHG +K+ ++ N L++MY+K +++
Sbjct: 345 IDAVALVG---ILHGCKKS-SHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVET 400
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVY-ETMLEFGLYPDTVTFLGVLTACA 233
+F + ISWNS+I G GRAS A V+ + ML GL PD +T +L C+
Sbjct: 401 VLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 460
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDH----YISIINLLGRAGKVKDAEEFVLRLPVEPN 289
++ G EL + Y L+ F++ ++I++ + G AE V + P
Sbjct: 461 QLCCLNLGKEL-----HGYTLRNNFENENFVCTALIDMYAKCGNEVQAES-VFKSIKAPC 514
Query: 290 HAIWGALV---GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCN 333
A W +++ + GL ++ L+ D + G ++ CN
Sbjct: 515 TATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACN 561
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 121/269 (44%), Gaps = 13/269 (4%)
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV--AYLDQGR 141
RD + S++ + E+ + I++F +++ +P + T ++ A + ++ Q
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+ K+ + + ++ SL+++Y K G + + +F M RD + WN++I G S +G
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+A ++ ML+ G P T + +L C G V +G + S GL+
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS-GLELDSQVK 189
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV---CGLSKTDADVASRATKRLL 318
++I+ + ++ A E + R + + W ++G GL + V ++ +
Sbjct: 190 NALISFYSKCAELGSA-EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 319 ELDPLNAPGHVALCNIYAANDRHIELTSL 347
E+ P V + N+ +A+ H L L
Sbjct: 249 EISP------VTIINLLSAHVSHEPLHCL 271
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 205/430 (47%), Gaps = 46/430 (10%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF-------------- 47
Y FG++D A N+ + + N+++ G+ + G KA +LF
Sbjct: 361 YMSFGMVDSAVEIF-ANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS 419
Query: 48 -----DTVPIRNKIAWTCMISGY-LSAGQVFKAC-------------------DLFDSMP 82
D + ++ + I G+ + G F C ++FD P
Sbjct: 420 LTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Query: 83 DR--DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLDQ 139
S A TS+I GY +N L +A+SLF + L+ + ++ G++ + +
Sbjct: 480 SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREM 539
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G Q+H +K Y D+ L NSL+SMYAKC + DD+ +IF+ M D ISWNS+I
Sbjct: 540 GYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYIL 599
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH--AGLVDKGWELFNSMVNSYGLQPG 257
EAL ++ M E + PD +T V++A + + + +LF SM Y ++P
Sbjct: 600 QRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPT 659
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
+HY + + +LG G +++AE+ + +PV+P ++ AL+ C + ++ VA R K +
Sbjct: 660 TEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRI-HSNTSVAKRVAKLI 718
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSG 377
L P ++ NIY+A+ +R+EMR +G RK P SWI+ + ++H F +
Sbjct: 719 LSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHAR 778
Query: 378 DRLEPHVEDI 387
D P +DI
Sbjct: 779 DTSHPQEKDI 788
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 147/291 (50%), Gaps = 16/291 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++I Y + ++K + L++ + ++ + +T MI+ Y+S G V A ++F ++ ++++I
Sbjct: 324 NALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTI 383
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+ ++++G+ +N +A+ LF +M+ G + + A G V+ Q+HG
Sbjct: 384 TYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFC 443
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIF----SNMAYRDKISWNSMIMGLSDHGRA 203
+K ++ ++ +L+ M +C + D+ +F SN+ + S+I G + +G
Sbjct: 444 IKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATT--SIIGGYARNGLP 501
Query: 204 SEALTVY-ETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
+A++++ T+ E L+ D V+ +L C G + G++ ++ Y L+ G+ I
Sbjct: 502 DKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ-----IHCYALKAGYFSDI 556
Query: 263 SIIN-LLGRAGKVKDAEEFVLRLPVEPNHAI--WGALVGVCGLSKTDADVA 310
S+ N L+ K D+++ + H + W +L+ C + + + D A
Sbjct: 557 SLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLIS-CYILQRNGDEA 606
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 4/188 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF-SP 119
+IS YL G +A +F S+ +++T++ISG+ + L EA+ +F M G P
Sbjct: 120 LISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQP 179
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK--CGEIDDSYR 177
TF + A V+ G Q+HG+ VK+ + + + NSL+S+Y K DD +
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLK 239
Query: 178 IFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAG 236
+F + RD SWN+++ L G++ +A ++ M G D+ T +L++C +
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSS 299
Query: 237 LVDKGWEL 244
++ +G EL
Sbjct: 300 VLLRGREL 307
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 110/243 (45%), Gaps = 13/243 (5%)
Query: 74 ACD----LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGFSPLNGTFAVLF 128
+CD LFD +P RD +W +++S V+ +A LF EM GF + T + L
Sbjct: 233 SCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLL 292
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI 188
+ + L +GR+LHG ++ +L + N+L+ Y+K ++ ++ M +D +
Sbjct: 293 SSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAV 352
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
++ MI G A+ ++ + E +T+T+ ++ G K +LF M
Sbjct: 353 TFTEMITAYMSFGMVDSAVEIFANVTE----KNTITYNALMAGFCRNGHGLKALKLFTDM 408
Query: 249 VNSYGLQPGFDHYISIINLLGRAGKVKDAEE---FVLRLPVEPNHAIWGALVGVCGLSKT 305
+ G++ S ++ G + K +E+ F ++ N I AL+ +C +
Sbjct: 409 LQR-GVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCER 467
Query: 306 DAD 308
AD
Sbjct: 468 MAD 470
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 116/251 (46%), Gaps = 20/251 (7%)
Query: 45 ELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR------DSIAWTSMISGYVQ 98
+LFD +P R+ +W ++S + G+ KA DLF M +R DS ++++S
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEM-NRVEGFGVDSFTLSTLLSSCTD 297
Query: 99 NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLIL 158
+ ++ L G + G L G + + L+ M + D +
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ----DAVT 353
Query: 159 ENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
+++ Y G +D + IF+N+ ++ I++N+++ G +G +AL ++ ML+ G+
Sbjct: 354 FTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV 413
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG--FDHYI--SIINLLGRAGKV 274
+ + AC GLV + + + ++ + ++ G F+ I +++++ R ++
Sbjct: 414 ELTDFSLTSAVDAC---GLVSE--KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERM 468
Query: 275 KDAEEFVLRLP 285
DAEE + P
Sbjct: 469 ADAEEMFDQWP 479
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 174/339 (51%), Gaps = 18/339 (5%)
Query: 60 CMISGYLSAGQV-------FKACD-------LFDSMPDRDSIAWTSMISGYVQNELIAEA 105
C+ G+LS V F C+ LF + DS+ SMI Y + +A
Sbjct: 261 CIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDA 320
Query: 106 ISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSM 165
+ LF M P TF+ + +M +V LD G +H + +K ++ D + SL+ M
Sbjct: 321 LRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLMEM 379
Query: 166 YAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVT 224
Y K G +D + +F+ +D I WN++IMGL+ + RA E+L ++ +L L PD VT
Sbjct: 380 YFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVT 439
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
+G+L AC +AG V++G ++F+SM ++G+ PG +HY II LL R G + +A++ ++
Sbjct: 440 LMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKI 499
Query: 285 PVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIEL 344
P EP+ IW ++ L D +A K +LE +P ++ ++ L IY R
Sbjct: 500 PFEPSSHIWEPIL-CASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENS 558
Query: 345 TSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPH 383
LR M ++ A G S I ++ V F + D+L+ H
Sbjct: 559 VKLRYAMNEHKLKSAQGSSKISIESSVFSFEA-DQLQIH 596
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 110/215 (51%), Gaps = 4/215 (1%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N + Y ++G + A +LFD +P +N I W + G G + A DLFD MP+RD +
Sbjct: 43 NRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVV 102
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +MISG V I +F +M P TF++L + V + G Q+HG
Sbjct: 103 SWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRH---GEQIHGNA 159
Query: 148 VKT-IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
+ + + Y+L++ NS++ MY + G D + +F M RD +SWN +I+ SD G A
Sbjct: 160 ICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVA 219
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
L + M E + PD T V++ C+ + KG
Sbjct: 220 LDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKG 254
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 130/307 (42%), Gaps = 13/307 (4%)
Query: 35 VQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMIS 94
V+ G+ + V N + W ++ Y G A +F +M DRD ++W +I
Sbjct: 149 VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLIL 208
Query: 95 GYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY 154
+ A+ F M P T +++ + L +G+Q + +K +
Sbjct: 209 SCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLS 268
Query: 155 DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 214
+ I+ + + M++KC +DDS ++F + D + NSMI S H +AL ++ +
Sbjct: 269 NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAM 328
Query: 215 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH----YISIINLLGR 270
+ PD TF VL++ +A ++D G + V+S ++ GFD S++ + +
Sbjct: 329 TQSVRPDKFTFSSVLSS-MNAVMLDHGAD-----VHSLVIKLGFDLDTAVATSLMEMYFK 382
Query: 271 AGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVA 330
G V D V + W + + GL++ V S A L ++ P V
Sbjct: 383 TGSV-DLAMGVFAKTDGKDLIFWNTV--IMGLARNSRAVESLAIFNQLLMNQSLKPDRVT 439
Query: 331 LCNIYAA 337
L I A
Sbjct: 440 LMGILVA 446
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 170/306 (55%), Gaps = 4/306 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y + AC +F+S+ + D +A +S+I+GY + EA+ LF E+ G P
Sbjct: 248 LVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPD 307
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
A++ G+ ++ G+++H ++ E D+ + ++L+ MY+KCG + + +F+
Sbjct: 308 CVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFA 367
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ ++ +S+NS+I+GL HG AS A + +LE GL PD +TF +L C H+GL++K
Sbjct: 368 GIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNK 427
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G E+F M + +G++P +HY+ ++ L+G AGK+++A EFV+ L + I GAL+ C
Sbjct: 428 GQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCC 487
Query: 301 GLSKTD--ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRK 358
+ + A+V + + + + V L N+YA R E+ LR + K
Sbjct: 488 EVHENTHLAEVVAENIHK--NGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGK 545
Query: 359 APGCSW 364
PG SW
Sbjct: 546 LPGISW 551
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 5/255 (1%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
++I + ++ Y AG + +A LF S+PD D W MI GY + I+LF M
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ 199
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P T L + + L +H +K + + +LV+MY++C I
Sbjct: 200 HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
+ +F++++ D ++ +S+I G S G EAL ++ + G PD V VL +CA
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCA 319
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
G E+ +S V GL+ ++I++ + G +K A +P E N +
Sbjct: 320 ELSDSVSGKEV-HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSF 377
Query: 294 GALV---GVCGLSKT 305
+L+ G+ G + T
Sbjct: 378 NSLILGLGLHGFAST 392
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LFD P+R W S+I Y + +SLF +++ P N T+A L A G
Sbjct: 62 LFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACL--ARGFSES 119
Query: 137 LDQG--RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
D R +HG+ + + +D I +++V Y+K G I ++ ++F ++ D WN MI
Sbjct: 120 FDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMI 179
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
+G G + + ++ M G P+ T + + + GL+D L V+++ L
Sbjct: 180 LGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS-----GLIDPSLLLVAWSVHAFCL 234
Query: 255 QPGFDHY----ISIINLLGRAGKVKDA 277
+ D + +++N+ R + A
Sbjct: 235 KINLDSHSYVGCALVNMYSRCMCIASA 261
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 192/369 (52%), Gaps = 8/369 (2%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTV---PIRNKIAWTCMISGYLSAGQVFKACDLFD 79
D +L S I+ AG + +++ V + ++ +I Y +G V A +F+
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFN 463
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNG-TFAVLFGAMGSVAYLD 138
+ R + W SM+ G+ QN EAISLF + M H + +N TF + A S+ L+
Sbjct: 464 QIKHRSVVTWNSMLCGFSQNGNSVEAISLF-DYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLS 198
+G+ +H + + + DL + +L+ MYAKCG+++ + +F M+ R +SW+SMI
Sbjct: 523 KGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYG 581
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
HGR A++ + M+E G P+ V F+ VL+AC H+G V++G FN ++ S+G+ P
Sbjct: 582 MHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN-LMKSFGVSPNS 640
Query: 259 DHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLL 318
+H+ I+LL R+G +K+A + +P + ++WG+LV C + + D+ L
Sbjct: 641 EHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQ-KMDIIKAIKNDLS 699
Query: 319 ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGD 378
++ + + L NIYA E LR M+ ++K PG S I + +V F +G+
Sbjct: 700 DIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGE 759
Query: 379 RLEPHVEDI 387
++I
Sbjct: 760 ENRIQTDEI 768
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 128/242 (52%), Gaps = 3/242 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G + A +FD MP RD +AW++++S ++N + +A+ +F M+ G
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE 199
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T + + L R +HG + +++ D L NSL++MY+KCG++ S RI
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F +A ++ +SW +MI + + +AL + M++ G+ P+ VT VL++C GL+
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLI 319
Query: 239 DKGWELFNSMVNSYGLQPGFDHY-ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+G + V L P ++ ++++ L GK+ D E VLR+ + N W +L+
Sbjct: 320 REGKSVHGFAVRR-ELDPNYESLSLALVELYAECGKLSDCET-VLRVVSDRNIVAWNSLI 377
Query: 298 GV 299
+
Sbjct: 378 SL 379
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 146/296 (49%), Gaps = 18/296 (6%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D ++ S++ G + G L A+ + + + ++ +++ Y G + + +F
Sbjct: 201 DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIF 260
Query: 79 DSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ + +++++WT+MIS Y + E +A+ F EM+ G P T + + G + +
Sbjct: 261 EKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIR 320
Query: 139 QGRQLHGMQVKTIYEYDLILEN---SLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+G+ +HG V+ E D E+ +LV +YA+CG++ D + ++ R+ ++WNS+I
Sbjct: 321 EGKSVHGFAVRR--ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
+ G +AL ++ M+ + PD T ++AC +AGLV G ++ ++ +
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT---- 434
Query: 256 PGFDHYI--SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADV 309
D ++ S+I++ ++G V D+ V + W ++ +CG S+ V
Sbjct: 435 DVSDEFVQNSLIDMYSKSGSV-DSASTVFNQIKHRSVVTWNSM--LCGFSQNGNSV 487
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 121/257 (47%), Gaps = 25/257 (9%)
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEM 112
R+ + T +I Y G + +F++ P DS + +I V L+ AI L+ +
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 113 MAHGFSPLNGTF-AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
++ F +VL GS +L G ++HG +K + D ++E SL+ MY + G
Sbjct: 92 VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGN 151
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
+ D+ ++F M RD ++W++++ ++G +AL +++ M++ G+ PD VT + V+
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 232 CA-----------HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
CA H + K ++L ++ N S++ + + G + +E
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCN------------SLLTMYSKCGDLLSSERI 259
Query: 281 VLRLPVEPNHAIWGALV 297
++ + N W A++
Sbjct: 260 FEKIA-KKNAVSWTAMI 275
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 201/411 (48%), Gaps = 63/411 (15%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPI-------R 53
MY+ G A A E L D + N++ GY Q G KA +++ + + R
Sbjct: 445 MYAKCGRFSPALKAFE-RLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSR 503
Query: 54 NKIAW--TCMIS-----GYLSAGQV------------------FKACD-------LFDSM 81
+ TC G GQ+ F CD LFD
Sbjct: 504 TMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKC 563
Query: 82 P-DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
++ +++W M++GY+ + EA++ F +M F P TF + A ++ L G
Sbjct: 564 GFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVG 623
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+H ++ + + NSLV MYAKCG I+ S + F ++ + +SWN+M+ + H
Sbjct: 624 MSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAH 683
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G AS A++++ +M E L PD+V+FL VL+AC HAGLV++G +F M + ++ +H
Sbjct: 684 GLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEH 743
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV----CGLSKTDADVASRATKR 316
Y +++LLG+AG +A E + R+ V+ + +WGAL+ C L ++A A +
Sbjct: 744 YACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNA-----ALCQ 798
Query: 317 LLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILV 367
L++L+PLN P H Y+ + R E+ ++ + ++K P CSWI V
Sbjct: 799 LVKLEPLN-PSH------YSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 15/299 (5%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++S Y G++ A LF ++ DRD ++W++MI+ Y Q EAISLF +MM
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK 398
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
P T + VA G+ +H +K E +L +++SMYAKCG + +
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKA 458
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + +D +++N++ G + G A++A VY+ M G+ PD+ T +G+L CA
Sbjct: 459 FERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDY 518
Query: 239 DKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWG 294
+G ++ ++ + GFD ++IN+ + + A + E + W
Sbjct: 519 ARGSCVYGQII-----KHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWN 573
Query: 295 ALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
++ G + AT R ++++ P V NI A EL++LR M +
Sbjct: 574 IMMN--GYLLHGQAEEAVATFRQMKVEKFQ-PNAVTFVNIVRAA---AELSALRVGMSV 626
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y + ++ A +F+ + +D +W +M++ Y N E + LF M +
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMN 299
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
A A V L +G +H V+ D+ + SL+SMY+KCGE++ + ++F
Sbjct: 300 KVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
N+ RD +SW++MI G+ EA++++ M+ + P+ VT VL CA
Sbjct: 360 NIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRL 419
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 287
G + + + ++ + ++I++ + G+ A + RLP++
Sbjct: 420 GKSIHCYAIKA-DIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH-GFSPLNGTFAVLFGAMGSVA 135
+FDS+ D + W SMI GY + L EA+ FG M G P +F A
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
+G ++H + + E D+ + +LV MY K ++ + ++F M +D ++WN+M+
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA-----------CAHAGLVDKGW 242
GL+ +G +S AL ++ M + D V+ ++ A C H ++ KG+
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF 232
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 116/265 (43%), Gaps = 41/265 (15%)
Query: 25 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR 84
++ ++I+ Y + G+ A + F+ +PI++ +A+ + GY G KA D++ +M
Sbjct: 437 ETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK-- 494
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
HG P + T + + +G ++
Sbjct: 495 -----------------------------LHGVCPDSRTMVGMLQTCAFCSDYARGSCVY 525
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY-RDKISWNSMIMGLSDHGRA 203
G +K ++ + + ++L++M+ KC + + +F + + +SWN M+ G HG+A
Sbjct: 526 GQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQA 585
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI- 262
EA+ + M P+ VTF+ ++ A A + G + +S++ Q GF
Sbjct: 586 EEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI-----QCGFCSQTP 640
Query: 263 ---SIINLLGRAGKVKDAEEFVLRL 284
S++++ + G ++ +E+ + +
Sbjct: 641 VGNSLVDMYAKCGMIESSEKCFIEI 665
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 113/240 (47%), Gaps = 4/240 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y A + A +FD M +D + W +M+SG QN + A+ LF +M +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ + L A+ + D R LHG+ +K + + + L+ MY C ++ + +
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESV 256
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + +D+ SW +M+ + +G E L +++ M + + + V L A A+ G +
Sbjct: 257 FEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDL 316
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
KG + + V GL S++++ + G+++ AE+ + + + + W A++
Sbjct: 317 VKGIAIHDYAVQQ-GLIGDVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSWSAMIA 374
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 146/263 (55%), Gaps = 1/263 (0%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N++++ Y + G+ + +++FD +P R+ ++WT M+ G +S Q+ A +F+ MP R+ +
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+WT+MI+ YV+N EA LF M P T L A + L GR +H
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K + D L +L+ MY+KCG + D+ ++F M + +WNSMI L HG EAL
Sbjct: 278 HKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEAL 337
Query: 208 TVYETMLEFG-LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+++E M E + PD +TF+GVL+ACA+ G V G F M+ YG+ P +H +I
Sbjct: 338 SLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQ 397
Query: 267 LLGRAGKVKDAEEFVLRLPVEPN 289
LL +A +V+ A V + +P+
Sbjct: 398 LLEQALEVEKASNLVESMDSDPD 420
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 5/189 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS S G+ A +F+ + + W MI N EA+ LF MM S
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 121 NG-TFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ TF + A + + + G Q+HG+ +K + D+ +N+L+ +Y KCG+ D ++F
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
M R +SW +M+ GL + + A V+ M + V++ ++TA D
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQM----PMRNVVSWTAMITAYVKNRRPD 233
Query: 240 KGWELFNSM 248
+ ++LF M
Sbjct: 234 EAFQLFRRM 242
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 157/302 (51%), Gaps = 3/302 (0%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G V + LF++ RD + W+SMISGY + +E ++L +M G + T
Sbjct: 297 YCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTL 356
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A + L +H +K + ++L N+L+ MYAKCG + + +F +
Sbjct: 357 LAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE 416
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
+D +SW+SMI HG SEAL +++ M++ G D + FL +L+AC HAGLV++ +
Sbjct: 417 KDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTI 476
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSK 304
F + Y + +HY INLLGR GK+ DA E + +P++P+ IW +L+ C +
Sbjct: 477 F-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACE-TH 534
Query: 305 TDADVASR-ATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCS 363
DVA + L++ +P N +V L I+ + + +R+ M+ + + K G S
Sbjct: 535 GRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFS 594
Query: 364 WI 365
I
Sbjct: 595 KI 596
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 17/252 (6%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ YL A +FD M ++ ++WT+MISG V N+ + LF M
Sbjct: 189 TALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLR 248
Query: 119 PLNGTFAVLFGAMGSVAYLDQG----RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
P T L + + L+ G +++HG + D L + ++MY +CG +
Sbjct: 249 PNRVT---LLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSL 305
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
S +F RD + W+SMI G ++ G SE + + M + G+ ++VT L +++AC +
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTN 365
Query: 235 AGLVDKGWELFNSMVNSYGLQPGFDHYI----SIINLLGRAGKVKDAEEFVLRLPVEPNH 290
+ L+ F S V+S L+ GF +I ++I++ + G + A E L E +
Sbjct: 366 STLLS-----FASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYEL-TEKDL 419
Query: 291 AIWGALVGVCGL 302
W +++ GL
Sbjct: 420 VSWSSMINAYGL 431
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP- 119
+IS Y + + +FD M RD++++ S+I+ Q+ L+ EA+ L EM +GF P
Sbjct: 88 LISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPK 147
Query: 120 --LNGTFAVLFGAMGSVAYLDQGRQLHGMQ-VKTIYEYDLILENSLVSMYAKCGEIDDSY 176
L + L MGS + + R H + V + ++L +LV MY K + ++
Sbjct: 148 SELVASLLALCTRMGSSSKV--ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 177 RIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+F M ++++SW +MI G + + ++ M L P+ VT L VL AC
Sbjct: 206 HVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
++ R ++ + + G V ++ EA+ L+ ++ H NG A+L + + A+ +
Sbjct: 4 ALSSRLNLELGNKLKGLVSDQFYDEALRLY-KLKIHSLGT-NGFTAILPSVIKACAFQQE 61
Query: 140 ----GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
G QLH + +K + D ++ NSL+SMYAK ++F M +RD +S+ S+I
Sbjct: 62 PFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIIN 121
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
G EA+ + + M +G P + +L C G K +F+++V
Sbjct: 122 SCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALV 175
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 166/310 (53%), Gaps = 6/310 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSP 119
+++ Y+ G + A L + RD ++ T++I+G+ Q N ++A +F +M+
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 314
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIY-EYDLILENSLVSMYAKCGEIDDSYRI 178
+ + ++A + GRQ+HG +K+ +D+ L NSL+ MYAK GEI+D+
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLA 374
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F M +D SW S+I G HG +A+ +Y M + P+ VTFL +L+AC+H G
Sbjct: 375 FEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQT 434
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP--VEPNHAIWGAL 296
+ GW+++++M+N +G++ +H II++L R+G +++A + V + + WGA
Sbjct: 435 ELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAF 494
Query: 297 VGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG- 355
+ C + ++ A +LL ++P ++ L ++YAAN + RK M+ G
Sbjct: 495 LDACR-RHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGS 553
Query: 356 VRKAPGCSWI 365
KAPG S +
Sbjct: 554 CNKAPGYSLV 563
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 22/244 (9%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
NS+ NG+ QL+ +I YL G V A LFD + RD +
Sbjct: 37 NSITNGFCSNLQLKDM-----------------LIDLYLKQGDVKHARKLFDRISKRDVV 79
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+WT+MIS + + +A+ LF EM T+ + + + L +G Q+HG
Sbjct: 80 SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEAL 207
K +LI+ ++L+S+YA+CG+++++ F +M RD +SWN+MI G + + A +
Sbjct: 140 EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSF 199
Query: 208 TVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINL 267
++++ ML G PD TF +L A +V K E+ S ++ ++ GF ++I
Sbjct: 200 SLFQLMLTEGKKPDCFTFGSLL----RASIVVKCLEIV-SELHGLAIKLGFGRSSALIRS 254
Query: 268 LGRA 271
L A
Sbjct: 255 LVNA 258
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 5/227 (2%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N I + ++S Y G++ +A FDSM +RD ++W +MI GY N + SLF M+
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P TF L A V L+ +LHG+ +K + L SLV+ Y KCG +
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRA-SEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+++++ RD +S ++I G S S+A +++ M+ D V +L C
Sbjct: 267 NAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKIC 326
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDA 277
V G ++ + S Q FD + S+I++ ++G+++DA
Sbjct: 327 TTIASVTIGRQIHGFALKSS--QIRFDVALGNSLIDMYAKSGEIEDA 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Query: 125 AVLFGAMGSVAYLDQGRQL---HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
++ A+ +Y + +QL HG + + +L L++ L+ +Y K G++ + ++F
Sbjct: 13 SLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDR 72
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
++ RD +SW +MI S G +AL +++ M + + T+ VL +C G + +G
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 132
Query: 242 WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
++ S V ++++L R GK+++A
Sbjct: 133 MQIHGS-VEKGNCAGNLIVRSALLSLYARCGKMEEAR 168
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 172/323 (53%), Gaps = 11/323 (3%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAE--AISLFGEMMAHGFS 118
++ Y S+ +V A ++ SM RD+I +TS+++ + NEL A+S+ M G
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRF--NELGKHEMALSVINYMYGDGIR 525
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+ A ++ L+ G+ LH VK+ + + NSLV MY+KCG ++D+ ++
Sbjct: 526 MDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKV 585
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F +A D +SWN ++ GL+ +G S AL+ +E M PD+VTFL +L+AC++ L
Sbjct: 586 FEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLT 645
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
D G E F M Y ++P +HY+ ++ +LGRAG++++A V + ++PN I+ L+
Sbjct: 646 DLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLR 705
Query: 299 VC---GLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKG 355
C G D+A++ L L P + ++ L ++Y + + R M K
Sbjct: 706 ACRYRGNLSLGEDMANKG----LALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKR 761
Query: 356 VRKAPGCSWILVKGRVHVFSSGD 378
+ K G S + V+G+VH F S D
Sbjct: 762 LSKKLGKSTVEVQGKVHSFVSED 784
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 34/273 (12%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
++S YL ++ A LFD M R AWT MIS + +++ A A+SLF EMMA G P
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TF+ + + + + G ++HG +KT +E + ++ +SL +Y+KCG+ ++ +FS
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFS 183
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA------- 233
++ D ISW MI L + EAL Y M++ G+ P+ TF+ +L A +
Sbjct: 184 SLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFG 243
Query: 234 ---HAGLVDKGWEL--------------FNSM------VNSYGLQPGFDHYISIINLLGR 270
H+ ++ +G L F+ M +NS G Q F + S+++ R
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVF-LWTSVVSGFVR 302
Query: 271 AGKVKDAEEFVLR---LPVEPNHAIWGALVGVC 300
+ K+A L L ++PN+ + A++ +C
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 125/251 (49%), Gaps = 20/251 (7%)
Query: 40 LEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISG 95
LE + + + +R N + T ++ Y ++ A + +S ++D WTS++SG
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 96 YVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYD 155
+V+N EA+ F EM + G P N T++ + +V LD G+Q+H +K +E
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Query: 156 LILENSLVSMYAKCGEID-DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML 214
+ N+LV MY KC + ++ R+F M + +SW ++I+GL DHG + + M+
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 215 EFGLYPDTVTFLGVLTACA-----------HAGL----VDKGWELFNSMVNSYGLQPGFD 259
+ + P+ VT GVL AC+ HA L VD + NS+V++Y D
Sbjct: 420 KREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVD 479
Query: 260 HYISIINLLGR 270
+ ++I + R
Sbjct: 480 YAWNVIRSMKR 490
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 2/244 (0%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N + + + Y GQ +AC+LF S+ + D+I+WT MIS V EA+ + EM+
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMV 217
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
G P TF L GA S L+ G+ +H + +++L+ SLV Y++ +++
Sbjct: 218 KAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKME 276
Query: 174 DSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
D+ R+ ++ +D W S++ G + RA EA+ + M GL P+ T+ +L+ C+
Sbjct: 277 DAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
+D G ++ + + G + D +++++ + + V V PN W
Sbjct: 337 AVRSLDFGKQIHSQTIK-VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSW 395
Query: 294 GALV 297
L+
Sbjct: 396 TTLI 399
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 67 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 126
SA +V +A +F +M + ++WT++I G V + + + L EM+ P T +
Sbjct: 374 SASEV-EASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSG 432
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 186
+ A + ++ + ++H ++ + ++++ NSLV YA ++D ++ + +M RD
Sbjct: 433 VLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRD 492
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 246
I++ S++ ++ G+ AL+V M G+ D ++ G ++A A+ G ++ G L
Sbjct: 493 NITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL-- 550
Query: 247 SMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCG 301
+ Y ++ GF S++N L + G ++DA++ V P+ W LV G+
Sbjct: 551 ---HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKK-VFEEIATPDVVSWNGLVSGLAS 606
Query: 302 LSKTDADVASRATKRLLELDP 322
+ +++ R+ E +P
Sbjct: 607 NGFISSALSAFEEMRMKETEP 627
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 23/152 (15%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G +H +K +L L N+L+S+Y K I ++ ++F M++R +W MI +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTACA-----------HAGLVDKGWELFNSM 248
+ AL+++E M+ G +P+ TF V+ +CA H ++ G+E NS+
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFE-GNSV 160
Query: 249 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
V S S+ +L + G+ K+A E
Sbjct: 161 VGS-----------SLSDLYSKCGQFKEACEL 181
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 168/330 (50%), Gaps = 7/330 (2%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
N++A + +I Y S V A + DSM +D ++ ++MISG EAIS+F M
Sbjct: 362 NEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMR 421
Query: 114 AHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEI 172
+P T L A A L + HG+ ++ ++ D+ + S+V YAKCG I
Sbjct: 422 D---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAI 478
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
+ + R F + ++ ISW +I + +G +AL +++ M + G P+ VT+L L+AC
Sbjct: 479 EMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSAC 538
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP--VEPNH 290
H GLV KG +F SMV +P HY I+++L RAG++ A E + LP V+
Sbjct: 539 NHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGA 597
Query: 291 AIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKE 350
+ WGA++ C + S +LEL+PL + G++ + +AA ++ +R+
Sbjct: 598 SAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRL 657
Query: 351 MRIKGVRKAPGCSWILVKGRVHVFSSGDRL 380
++ + VR G S + F +GD+L
Sbjct: 658 VKERKVRVVAGYSMVREGNLAKRFLAGDKL 687
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVA 135
LFD M +RD I+W+ +I YVQ++ + LF EM+ + P T + A +
Sbjct: 181 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 240
Query: 136 YLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
+D GR +HG ++ ++ D+ + NSL+ MY+K ++D ++R+F R+ +SWNS++
Sbjct: 241 DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA-----------HAGLVDKGWE 243
G + R EAL ++ M++ + D VT + +L C H ++ +G+E
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE 360
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDA 277
N L D Y S +L+ AG V D+
Sbjct: 361 -----SNEVALSSLIDAYTS-CSLVDDAGTVLDS 388
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y V A +FD R+ ++W S+++G+V N+ EA+ +F M+
Sbjct: 268 LIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVD 327
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T L + +HG+ ++ YE + + +SL+ Y C +DD+ +
Sbjct: 328 EVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLD 387
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA-HAGLVD 239
+M Y+D +S ++MI GL+ GR+ EA++++ M + P+ +T + +L AC+ A L
Sbjct: 388 SMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRT 444
Query: 240 KGW 242
W
Sbjct: 445 SKW 447
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 9/196 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y+ G + FD M RDS++W ++ G + E + F ++ GF P T
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
++ A S+ + G ++HG +++ + ++NS++ MYA + + ++F M+
Sbjct: 131 VLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSE 187
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
RD ISW+ +I L +++ M+ E PD VT VL AC +D G
Sbjct: 188 RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVG-- 245
Query: 244 LFNSMVNSYGLQPGFD 259
V+ + ++ GFD
Sbjct: 246 ---RSVHGFSIRRGFD 258
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 31/144 (21%)
Query: 89 WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQV 148
W ++SGY + I A F + P F ++F A +++L QG
Sbjct: 25 WREVVSGYSE---IQRAGVQFND-------PF--VFPIVFKACAKLSWLFQG-------- 64
Query: 149 KTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALT 208
NS+ Y KCG++ R F M RD +SWN ++ GL D+G E L
Sbjct: 65 -----------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113
Query: 209 VYETMLEFGLYPDTVTFLGVLTAC 232
+ + +G P+T T + V+ AC
Sbjct: 114 WFSKLRVWGFEPNTSTLVLVIHAC 137
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
S+++ Y + G +E A+ FD + +N I+WT +IS Y G +PD+
Sbjct: 466 TSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAING-----------LPDK--- 511
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
A++LF EM G++P T+ A + +G +
Sbjct: 512 -----------------ALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM 554
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI---SWNSMIMGLSDH 200
V+ ++ L + +V M ++ GEID + + N+ K +W +++ G +
Sbjct: 555 VEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNR 610
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 143/283 (50%), Gaps = 9/283 (3%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T +I Y G + A +FD +D + W MI Y + L+ E + L +M
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK 325
Query: 119 PLNGTFAVLFGAMGSVAYLDQ---GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
P + TF G + S AY + GR + + + D IL +LV MYAK G ++ +
Sbjct: 326 PNSSTFV---GLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKA 382
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLE--FGLYPDTVTFLGVLTACA 233
IF+ M +D SW +MI G HG A EA+T++ M E + P+ +TFL VL AC+
Sbjct: 383 VEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIW 293
H GLV +G F MV +Y P +HY +++LLGRAG++++A E + LP+ + W
Sbjct: 443 HGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAW 502
Query: 294 GALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYA 336
AL+ C + +AD+ RL E+ + + L +A
Sbjct: 503 RALLAACRVYG-NADLGESVMMRLAEMGETHPADAILLAGTHA 544
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDR-DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
+I Y G++ A +FD MP D++ ++++++GY+Q A A+ LF M
Sbjct: 166 LIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVV 225
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
T A+ + L H + +K + DL L +L+ MY K G I + RIF
Sbjct: 226 NVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF 285
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
+D ++WN MI + G E + + M + P++ TF+G+L++CA++
Sbjct: 286 DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYS 341
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 15/292 (5%)
Query: 7 LMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYL 66
L+ L +L + D S I+GY+ L+K D + +A++ ++
Sbjct: 23 LLSPQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDK-----DDFAVSKLLAFSSVL---- 73
Query: 67 SAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 126
+ A +F+ + + + + +MI GY ++ A S+F ++ A G + +F
Sbjct: 74 ---DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFIT 130
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR- 185
+ + G LHG+ +++ + L N+L+ Y CG+I D+ ++F M
Sbjct: 131 TLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSV 190
Query: 186 DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELF 245
D +++++++ G + + AL ++ M + + + T L L+A + G + G E
Sbjct: 191 DAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLS-GAESA 249
Query: 246 NSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ + GL ++I + G+ G + A + + + W ++
Sbjct: 250 HVLCIKIGLDLDLHLITALIGMYGKTGGISSARR-IFDCAIRKDVVTWNCMI 300
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMM 113
+ I T ++ Y G + KA ++F+ M D+D +WT+MISGY + L EA++LF +M
Sbjct: 362 DAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKME 421
Query: 114 AHG--FSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN--SLVSMYAKC 169
P TF V+ A + +G + V+ Y + +E+ +V + +
Sbjct: 422 EENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEA-YSFTPKVEHYGCVVDLLGRA 480
Query: 170 GEIDDSYRIFSNMAY-RDKISWNSMIMGLSDHGRASEALTVYETMLEFG 217
G+++++Y + N+ D +W +++ +G A +V + E G
Sbjct: 481 GQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMG 529
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR--- 84
++++ Y + G LEKA E+F+ + ++ +WT MISGY + G +A LF+ M +
Sbjct: 367 TALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCK 426
Query: 85 ---DSIAWTSMISGYVQNELIAEAISLFGEMM-AHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+ I + +++ L+ E I F M+ A+ F+P + + +G L++
Sbjct: 427 VRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEA 486
Query: 141 RQL 143
+L
Sbjct: 487 YEL 489
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 187/369 (50%), Gaps = 6/369 (1%)
Query: 1 MYSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC 60
MY G MD A + ++ D S N+++ + G+LE F +P + + +
Sbjct: 201 MYGKCGFMDDAVLVFQ-HMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNE 259
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I ++ +G A + MP+ +S +W ++++GYV +E EA F +M + G
Sbjct: 260 LIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFD 319
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ +++ A+ ++A + G +H K + +++ ++L+ MY+KCG + + +F
Sbjct: 320 EYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFW 379
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETM-LEFGLYPDTVTFLGVLTACAHAGL-V 238
M ++ I WN MI G + +G + EA+ ++ + E L PD TFL +L C+H + +
Sbjct: 380 TMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPM 439
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
+ F M+N Y ++P +H S+I +G+ G+V A++ + + W AL+G
Sbjct: 440 EVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLG 499
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPG--HVALCNIYAANDRHIELTSLRKEMRIKGV 356
C ++ D A +++EL + ++ + N+YA ++R E+ +RK MR GV
Sbjct: 500 ACS-ARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGV 558
Query: 357 RKAPGCSWI 365
K G SWI
Sbjct: 559 LKEVGSSWI 567
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 10/221 (4%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y ++ + A +FD MPD D I+W S++SGYVQ+ E I LF E+ P +F
Sbjct: 100 YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSF 159
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMA 183
A + G +H VK E ++++ N L+ MY KCG +DD+ +F +M
Sbjct: 160 TAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME 219
Query: 184 YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE 243
+D +SWN+++ S +G+ L + M PDTVT+ ++ A +G + ++
Sbjct: 220 EKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTYNELIDAFVKSGDFNNAFQ 275
Query: 244 LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
+ + M N P + +I+ + K +A EF ++
Sbjct: 276 VLSDMPN-----PNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 102 IAEAISLFG---------EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIY 152
I A++ FG E++ G P L G+ Y+ RQLHG K +
Sbjct: 27 IVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGF 86
Query: 153 EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYET 212
+ L NSL+ Y ++D++++F M D ISWNS++ G GR E + ++
Sbjct: 87 VSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLE 146
Query: 213 MLEFGLYPDTVTFLGVLTACA-----------HAGLVDKGWELFNSMVNSYGLQPGFDHY 261
+ ++P+ +F L ACA H+ LV G E N +V +
Sbjct: 147 LHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN---------- 196
Query: 262 ISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
+I++ G+ G + DA V + E + W A+V C
Sbjct: 197 -CLIDMYGKCGFMDDA-VLVFQHMEEKDTVSWNAIVASC 233
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 153/300 (51%), Gaps = 1/300 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + A +F + W S+ISG+ NE E L EM+ GF P
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ T A + V L G++ H ++ Y+ LIL NSLV MYAK GEI + R+F
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+M RDK+++ S+I G G+ AL ++ M G+ PD VT + VL+AC+H+ LV
Sbjct: 483 DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVR 542
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+G LF M + +G++ +HY +++L RAG + A + +P EP+ A+ L+
Sbjct: 543 EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKA 602
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C + A K LLE P + ++ L ++YA +L +++ + GV+KA
Sbjct: 603 CLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKA 662
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 149/322 (46%), Gaps = 52/322 (16%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM----PD 83
N++I+ Y + G+++ A+ LFD + R+ ++W +I+ Y S ++ +A L D M +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGFSPLN---GTFAVLFG--AMGSVAYL 137
+ W ++ G + EA + G + G N G+ A++ G A + L
Sbjct: 283 ASIVTWNTIAGGCL------EAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGAL 336
Query: 138 DQGRQLHGMQVKTI-YEYDLI-LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
G+ H + +++ + +D+ + NSL++MY++C ++ ++ +F + +WNS+I
Sbjct: 337 KWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIIS 396
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE------------ 243
G + + R+ E + + ML G +P+ +T +L A G + G E
Sbjct: 397 GFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYK 456
Query: 244 ----LFNSMVNSY-------GLQPGFDH--------YISIINLLGRAGKVKDAEEFVL-- 282
L+NS+V+ Y + FD Y S+I+ GR GK + A +
Sbjct: 457 DCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM 516
Query: 283 -RLPVEPNHAIWGALVGVCGLS 303
R ++P+H A++ C S
Sbjct: 517 DRSGIKPDHVTMVAVLSACSHS 538
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 15/242 (6%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQ--AGQLEKAQEL-----FDTVPIRN 54
+ F L+ Y S + E L + SL S G+ + GQ A + FD+V +
Sbjct: 66 FRTFSLLRYQSGSHEFVL--YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 55 KIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA 114
+ + + A + + ++ +P W +I Y++N+ E++S++ MM+
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLP------WNVLIGSYIRNKRFQESVSVYKRMMS 177
Query: 115 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
G T+ + A ++ GR +HG + + +L + N+L+SMY + G++D
Sbjct: 178 KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 237
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
+ R+F M+ RD +SWN++I + + EA + + M G+ VT+ + C
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 235 AG 236
AG
Sbjct: 298 AG 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+QLH + + E+D +L LV+ Y+ +D++ I N + WN +I
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTAC------AHAGLVDKGWELFNSMVNSYG 253
+ R E+++VY+ M+ G+ D T+ V+ AC A+ +V E+ + N Y
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
++I++ R GKV A R+ E + W A++
Sbjct: 222 CN-------ALISMYKRFGKVDVARRLFDRMS-ERDAVSWNAII 257
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 153/300 (51%), Gaps = 1/300 (0%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + A +F + W S+ISG+ NE E L EM+ GF P
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ T A + V L G++ H ++ Y+ LIL NSLV MYAK GEI + R+F
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+M RDK+++ S+I G G+ AL ++ M G+ PD VT + VL+AC+H+ LV
Sbjct: 483 DSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVR 542
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+G LF M + +G++ +HY +++L RAG + A + +P EP+ A+ L+
Sbjct: 543 EGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKA 602
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C + A K LLE P + ++ L ++YA +L +++ + GV+KA
Sbjct: 603 CLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKA 662
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 149/322 (46%), Gaps = 52/322 (16%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM----PD 83
N++I+ Y + G+++ A+ LFD + R+ ++W +I+ Y S ++ +A L D M +
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 84 RDSIAWTSMISGYVQNELIAEAISLFGEM-MAHGFSPLN---GTFAVLFG--AMGSVAYL 137
+ W ++ G + EA + G + G N G+ A++ G A + L
Sbjct: 283 ASIVTWNTIAGGCL------EAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGAL 336
Query: 138 DQGRQLHGMQVKTI-YEYDLI-LENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIM 195
G+ H + +++ + +D+ + NSL++MY++C ++ ++ +F + +WNS+I
Sbjct: 337 KWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIIS 396
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWE------------ 243
G + + R+ E + + ML G +P+ +T +L A G + G E
Sbjct: 397 GFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYK 456
Query: 244 ----LFNSMVNSY-------GLQPGFDH--------YISIINLLGRAGKVKDAEEFVL-- 282
L+NS+V+ Y + FD Y S+I+ GR GK + A +
Sbjct: 457 DCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM 516
Query: 283 -RLPVEPNHAIWGALVGVCGLS 303
R ++P+H A++ C S
Sbjct: 517 DRSGIKPDHVTMVAVLSACSHS 538
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 15/242 (6%)
Query: 2 YSVFGLMDYASNALEGNLNNFDDQSLNSMINGYVQ--AGQLEKAQEL-----FDTVPIRN 54
+ F L+ Y S + E L + SL S G+ + GQ A + FD+V +
Sbjct: 66 FRTFSLLRYQSGSHEFVL--YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 55 KIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA 114
+ + + A + + ++ +P W +I Y++N+ E++S++ MM+
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLP------WNVLIGSYIRNKRFQESVSVYKRMMS 177
Query: 115 HGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
G T+ + A ++ GR +HG + + +L + N+L+SMY + G++D
Sbjct: 178 KGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDV 237
Query: 175 SYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
+ R+F M+ RD +SWN++I + + EA + + M G+ VT+ + C
Sbjct: 238 ARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLE 297
Query: 235 AG 236
AG
Sbjct: 298 AG 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSD 199
G+QLH + + E+D +L LV+ Y+ +D++ I N + WN +I
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 200 HGRASEALTVYETMLEFGLYPDTVTFLGVLTAC------AHAGLVDKGWELFNSMVNSYG 253
+ R E+++VY+ M+ G+ D T+ V+ AC A+ +V E+ + N Y
Sbjct: 162 NKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
++I++ R GKV A R+ E + W A++
Sbjct: 222 CN-------ALISMYKRFGKVDVARRLFDRMS-ERDAVSWNAII 257
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 176/352 (50%), Gaps = 17/352 (4%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNK---IAWTCMISGYLSAGQVFKACDLFDSMP 82
+L+S++ L++ +++ V + + + T MIS Y S G + +A +++S+
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 83 -DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
D + S+ISG ++N EA L P + + L G+
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGK 301
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHG 201
Q+H + ++ + D L N L+ MY KCG+I + IF + + +SW SMI + +G
Sbjct: 302 QIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNG 361
Query: 202 RASEALTVYETMLE--FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
+AL ++ M E G+ P++VTFL V++ACAHAGLV +G E F M Y L PG +
Sbjct: 362 DGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTE 421
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPVEPNH----AIWGALVGVCGLSKTDADVASRATK 315
HY+ I++L +AG+ ++ V R+ N AIW A++ C L+ D +
Sbjct: 422 HYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLN-MDLTRGEYVAR 480
Query: 316 RLL-ELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL 366
RL+ E P NA +V + N YAA + + LR +++ KG+ K G S +
Sbjct: 481 RLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSLFI 532
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 115/229 (50%), Gaps = 12/229 (5%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP--LNGTFAVLFGAMGSV 134
LFD +P RD + S +S ++++ + ++LF + H SP + TF + GA +
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF--LQIHRASPDLSSHTFTPVLGACSLL 97
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
+Y + GRQ+H + +K E I + +L+ MY+K G + DS R+F ++ +D +SWN+++
Sbjct: 98 SYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALL 157
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G +G+ EAL V+ M + T V+ CA ++ +G + V++ +
Sbjct: 158 SGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQ-----VHAMVV 212
Query: 255 QPGFDHYI---SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
G D + ++I+ G + +A + L V + + +L+ C
Sbjct: 213 VTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGC 261
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 111/235 (47%), Gaps = 16/235 (6%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAH 115
I+ T +I Y G + + +F+S+ ++D ++W +++SG+++N EA+ +F M
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 116 GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
T + + S+ L QG+Q+H M V T + ++L +++S Y+ G I+++
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEA 238
Query: 176 YRIFSNM-AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAH 234
++++++ + D++ NS+I G + EA +L P+ L C+
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCS- 292
Query: 235 AGLVDKGWELFNSMVNSYGLQPGF--DHYIS--IINLLGRAGKVKDAEEFVLRLP 285
D ++ L+ GF D + ++++ G+ G++ A +P
Sbjct: 293 ----DNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP 343
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D + N +++ Y + GQ+ +A+ +F +P ++ ++WT MI Y G KA ++F M
Sbjct: 315 DSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMC 374
Query: 83 DR------DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 123
+ +S+ + +IS L+ E FG MM + + GT
Sbjct: 375 EEGSGVLPNSVTFLVVISACAHAGLVKEGKECFG-MMKEKYRLVPGT 420
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 3/280 (1%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISG-YLSAGQVFKACDLFDSM 81
+D L+S++ Y + + A L D + +++G Y GQ ++ L ++
Sbjct: 446 NDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTL 505
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
D+++W I+ +++ E I LF M+ P TF + + L G
Sbjct: 506 EQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGS 565
Query: 142 QLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+HG+ KT + D + N L+ MY KCG I ++F ++ I+W ++I L H
Sbjct: 566 SIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIH 625
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G EAL ++ L G PD V+F+ +LTAC H G+V +G LF M YG++P DH
Sbjct: 626 GYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDH 684
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
Y ++LL R G +K+AE + +P + +W + C
Sbjct: 685 YRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS Y G A +F D ++W ++I ++E +A+ LF M HGFSP
Sbjct: 256 LISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPN 315
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
GT+ + G V L GRQ+HGM +K E ++L N+L+ YAKCG ++DS F
Sbjct: 316 QGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFD 375
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA------- 233
+ ++ + WN+++ G ++ L+++ ML+ G P TF L +C
Sbjct: 376 YIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQL 434
Query: 234 HAGLVDKGWE----LFNSMVNSYG 253
H+ +V G+E + +S++ SY
Sbjct: 435 HSVIVRMGYEDNDYVLSSLMRSYA 458
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 4/262 (1%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
TC++ Y + A +F+ MP + W M+S + E + F E++ G S
Sbjct: 153 TCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS 212
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
+F + + V LD +QLH K + ++ + NSL+S Y KCG + R+
Sbjct: 213 LTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERM 272
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
F + D +SWN++I + +AL ++ +M E G P+ T++ VL + L+
Sbjct: 273 FQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLL 332
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G ++ ++ + G + G ++I+ + G ++D+ + N W AL+
Sbjct: 333 SCGRQIHGMLIKN-GCETGIVLGNALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALLS 390
Query: 299 VCGLSKTDADVASRATKRLLEL 320
G + D + ++L++
Sbjct: 391 --GYANKDGPICLSLFLQMLQM 410
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 23/276 (8%)
Query: 17 GNLNNFDDQSLNSMINGYVQAGQLEKAQEL----FDTVPIRNKIAWTC--MISGYLSAGQ 70
G+L N +D+ + S++N +A + + L + + + C +IS Y G+
Sbjct: 6 GDLANHNDRVV-SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGE 64
Query: 71 VFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 130
V A +FD MP+R+ +++ ++I GY + + +A +F EM G+ P T + L
Sbjct: 65 VSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-- 122
Query: 131 MGSVAYLD--QGRQLHGMQVKT-IYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK 187
S A LD G QLHG+ +K ++ D + L+ +Y + ++ + ++F +M ++
Sbjct: 123 --SCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSL 180
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
+WN M+ L G E + + ++ G +FLGVL + +D +L S
Sbjct: 181 ETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCS 240
Query: 248 MVNSYGLQPGFDHYISIINLL----GRAGKVKDAEE 279
+ G D IS++N L G+ G AE
Sbjct: 241 -----ATKKGLDCEISVVNSLISAYGKCGNTHMAER 271
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 160 NSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
N+++S+Y K GE+ + ++F M R+K+S+N++I G S +G +A V+ M FG
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDA 277
P+ T G+L+ A L + + + YGL D ++ ++ L GR ++ A
Sbjct: 113 PNQSTVSGLLSC---ASLDVRAGTQLHGLSLKYGLFMA-DAFVGTCLLCLYGRLDLLEMA 168
Query: 278 EEFVLRLPVE 287
E+ +P +
Sbjct: 169 EQVFEDMPFK 178
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 151/309 (48%), Gaps = 5/309 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I+ Y + A +F + D + +W +IS QN+ E LF + P
Sbjct: 622 LITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPN 678
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
TF L A + G Q H ++ ++ + + +LV MY+ CG ++ ++F
Sbjct: 679 EITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFR 738
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAHAGLVD 239
N +WNS+I HG +A+ +++ + + P+ +F+ +L+AC+H+G +D
Sbjct: 739 NSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFID 798
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGV 299
+G + M +G++P +H + I+++LGRAGK+++A EF+ + +WGAL+
Sbjct: 799 EGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSA 858
Query: 300 CGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
C D + + L E++P NA +++L N Y E LRK + ++K
Sbjct: 859 CNY-HGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKL 917
Query: 360 PGCSWILVK 368
PG S I V+
Sbjct: 918 PGYSVIDVR 926
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+F M RD ++W ++++ + N +++ F M G TF+ + A S+
Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEE 304
Query: 137 LDQGRQLHGMQVKTIY--EYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
L G LHG+ +K+ Y E + + NS++SMY+KCG+ + + +F + RD IS N+++
Sbjct: 305 LTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAIL 364
Query: 195 MGLSDHGRASEALTVYETMLEF-GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
G + +G EA + M + PD T + + + C +G + V
Sbjct: 365 NGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEM 424
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ S+I++ G+ G A E + + + W +++
Sbjct: 425 QSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMI 467
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 119/239 (49%), Gaps = 5/239 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+++ Y G++ + LFD + ++D I W SMI+ QN A+ LF EM+ G
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFD 187
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
+ T + A+ S+ + LH + ++T D L N+L+++YAK + + +F+
Sbjct: 188 STTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFT 247
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+M +RD +SWN+++ +G ++L +++M G DTVTF V++AC+ +
Sbjct: 248 HMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTL 307
Query: 241 GWELFNSMVNS-YGLQPGFDHYISIINLLGRAGKVKDA----EEFVLRLPVEPNHAIWG 294
G L ++ S Y + SII++ + G + A EE V R + N + G
Sbjct: 308 GESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNG 366
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSP 119
+IS Y G A +F+ + RD I+ ++++G+ N + EA + +M + P
Sbjct: 332 IISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQP 391
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVK-TIYEYDLILENSLVSMYAKCGEIDDSYRI 178
T + G +++ +GR +HG V+ + L + NS++ MY KCG + +
Sbjct: 392 DIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL 451
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVY-ETMLEFGLYPDTV-TFLGVLTAC 232
F +RD +SWNSMI S +G +A ++ E + E+ ++ T L +LT+C
Sbjct: 452 FKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 137/274 (50%), Gaps = 3/274 (1%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPD-RDSIAWTSMISGYVQNELIAEAISLFGEM 112
N I ++ Y G + A F M + RD ++W ++++G + +A+S F M
Sbjct: 429 NVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM 488
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
P T A L ++ L+ G+ +HG ++ Y+ D+++ ++V MY+KC
Sbjct: 489 QVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCF 547
Query: 173 DDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
D + +F A RD I WNS+I G +GR+ E ++ + G+ PD VTFLG+L AC
Sbjct: 548 DYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC 607
Query: 233 AHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAI 292
G V+ G++ F+SM Y + P +HY +I L + G + EEF+L +P +P +
Sbjct: 608 IREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQM 667
Query: 293 WGALVGVCGLSKTDADVASRATKRLLELDPLNAP 326
+ C + + + + A KRL+ L P
Sbjct: 668 LTRINDACQRYRW-SKLGAWAAKRLMNDHYLQPP 700
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 148/307 (48%), Gaps = 35/307 (11%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
S+ + YV+ +LE A+ +FD ++ +WT +SGY +G +A +LFD MP+R+ +
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+W +M+ GYV EA+ M + N T + ++ + G+Q HG
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YRDKISWNSMIMGLSDHGRASEA 206
+ Y+ ++I+ N+L+ MY KCG + + F M+ RD++SWN+++ G++ GR+ +A
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACA-----------HAGLVDKGWE----LFNSMVNS 251
L+ +E M + P T +L CA H L+ G++ + +MV+
Sbjct: 482 LSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDM 540
Query: 252 YGLQPGFDHYI---------------SIINLLGRAGKVKDAEEFVLRLP---VEPNHAIW 293
Y FD+ I SII R G+ K+ E + L V+P+H +
Sbjct: 541 YSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTF 600
Query: 294 GALVGVC 300
++ C
Sbjct: 601 LGILQAC 607
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 89/180 (49%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I Y G V A +LF+ MP+RD +W ++I+ QN + E +F M G
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
+FA + + G + L RQLH VK Y ++ LE S+V +Y KC + D+ R+F
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
+ +SWN ++ + G EA+ ++ MLE + P T V+ AC+ + ++ G
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 41/266 (15%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+FD + + ++W ++ Y++ EA+ +F +M+ PLN T + + A
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L+ G+ +H + VK D ++ S+ MY KC ++ + R+F +D SW S + G
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSG 338
Query: 197 LSDHGRASEALTVYETMLEFGLYP-------------------------------DTVTF 225
+ G EA +++ M E + D VT
Sbjct: 339 YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTL 398
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL----GRAGKVKDAEEFV 281
+ +L C+ V G + + + G+D + + N L G+ G ++ A +
Sbjct: 399 VWILNVCSGISDVQMG-----KQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 282 LRLPVEPNHAIWGALV-GVCGLSKTD 306
++ + W AL+ GV + +++
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSE 479
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD 186
LF + S A + Q R++ V + L N + Y KCG +DD+ +F M RD
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV--DKGWEL 244
SWN++I + +G + E ++ M G+ +F GVL +C GL+ +
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLRQ 183
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
+ V YG D SI+++ G+ + DA V V P+ W +V
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARR-VFDEIVNPSDVSWNVIV 235
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 145/286 (50%), Gaps = 21/286 (7%)
Query: 97 VQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL 156
Q L +AI E++ G P F +LF + ++ L+ +++H +++ + D
Sbjct: 216 CQRRLYKDAI----ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDP 271
Query: 157 ILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEF 216
L N ++SM+ +C I D+ R+F +M +D SW+ M+ SD+G +AL ++E M +
Sbjct: 272 KLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKH 331
Query: 217 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 276
GL P+ TFL V ACA G +++ + F+SM N +G+ P +HY+ ++ +LG+ G + +
Sbjct: 332 GLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVE 391
Query: 277 AEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNA---------PG 327
AE+++ LP EP W A+ L D D+ + ++++DP A P
Sbjct: 392 AEQYIRDLPFEPTADFWEAMRNYARL-HGDIDLEDYMEELMVDVDPSKAVINKIPTPPPK 450
Query: 328 HVALCNIYAANDRHIELTSLR------KEMRI-KGVRKAPGCSWIL 366
N+ + R +E +L KEM KGV P ++L
Sbjct: 451 SFKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVVYVPDTRFVL 496
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS + + A +FD M D+D +W M+ Y N + +A+ LF EM HG P
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 121 NGTFAVLFGAMGSVA-------YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEID 173
TF +F A +V + D + HG+ KT E+ L ++ + KCG +
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKT--EHYL----GVLGVLGKCGHLV 390
Query: 174 DSYRIFSNMAYRDKIS-WNSM 193
++ + ++ + W +M
Sbjct: 391 EAEQYIRDLPFEPTADFWEAM 411
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 142/285 (49%), Gaps = 34/285 (11%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
N MI+GY + G E+A +LFD +P + ++WT MI+G+ + A FD MP++ +
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV 230
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS----------VAYL 137
+W +M+SGY QN +A+ LF +M+ G P T+ ++ A V +
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 138 DQGRQLHGMQVKTIY----------------------EYDLILENSLVSMYAKCGEIDDS 175
D+ R VKT + +L+ N+++S Y + G++ +
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSA 350
Query: 176 YRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFG-LYPDTVTFLGVLTACAH 234
++F M R+ +SWNS+I G + +G+A+ A+ +E M+++G PD VT + VL+AC H
Sbjct: 351 RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Query: 235 AGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
++ G + + ++ Y S+I + R G + +A+
Sbjct: 411 MADLELG-DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKR 454
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 126/235 (53%), Gaps = 7/235 (2%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPI-RNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSI 87
++++ + + ++ A+ +F+ + RN + W MISGY G + A LFD+MP R+ +
Sbjct: 304 ALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVV 363
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFS-PLNGTFAVLFGAMGSVAYLDQGRQLHGM 146
+W S+I+GY N A AI F +M+ +G S P T + A G +A L+ G +
Sbjct: 364 SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDY 423
Query: 147 QVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEA 206
K + + SL+ MYA+ G + ++ R+F M RD +S+N++ + +G E
Sbjct: 424 IRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVET 483
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
L + M + G+ PD VT+ VLTAC AGL+ +G +F S+ N P DHY
Sbjct: 484 LNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHY 533
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 17/229 (7%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
+FDS+ + SM + + ++ + + L+ + G P +F V+ + G
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI 121
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L Q + K + D + N ++ MY K ++ + ++F ++ R WN MI G
Sbjct: 122 LFQA-----LVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
G EA +++ M E D V++ ++T A ++ + F+ M +
Sbjct: 177 YWKWGNKEEACKLFDMMPE----NDVVSWTVMITGFAKVKDLENARKYFDRMP-----EK 227
Query: 257 GFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALVGVCGL 302
+ ++++ + G +DA +LRL V PN W ++ C
Sbjct: 228 SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSF 276
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 108/206 (52%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
LFD + R+ AWT+MI YV+N + I +F M+ P + T + +
Sbjct: 475 LFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKA 534
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMG 196
L G++LHG +K +E + ++ MY KCG++ + F +A + ++W ++I
Sbjct: 535 LKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEA 594
Query: 197 LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
+ +A+ +E M+ G P+T TF VL+ C+ AG VD+ + FN M+ Y LQP
Sbjct: 595 YGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQP 654
Query: 257 GFDHYISIINLLGRAGKVKDAEEFVL 282
+HY +I LL R G+V++A+ +
Sbjct: 655 SEEHYSLVIELLNRCGRVEEAQRLAV 680
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%), Gaps = 12/225 (5%)
Query: 46 LFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEA 105
LF++V ++ T ++ Y G+V A +FD + +RD + W +MI+G N+ EA
Sbjct: 245 LFNSVFLK-----TSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEA 299
Query: 106 ISLFGEMMAH-GFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTI-YEYDLILENSLV 163
+ LF M++ P + + +G V L G+++H +K+ Y + + L+
Sbjct: 300 LGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLI 359
Query: 164 SMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 223
+Y KCG++ R+F R+ ISW +++ G + +GR +AL M + G PD V
Sbjct: 360 DLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVV 419
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLL 268
T VL CA + +G E ++ Y L+ F +S++ L
Sbjct: 420 TIATVLPVCAELRAIKQGKE-----IHCYALKNLFLPNVSLVTSL 459
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + +F R++I+WT+++SGY N +A+ M GF P
Sbjct: 358 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPD 417
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
T A + + + QG+++H +K ++ ++ L SL+ MY+KCG + R+F
Sbjct: 418 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD 477
Query: 181 NMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
+ R+ +W +MI ++ + V+ ML PD+VT VLT C+ +
Sbjct: 478 RLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKL 537
Query: 241 GWELFNSMVNSYGLQPGFDH--YIS--IINLLGRAGKVKDA 277
G EL + + L+ F+ ++S II + G+ G ++ A
Sbjct: 538 GKEL-----HGHILKKEFESIPFVSARIIKMYGKCGDLRSA 573
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 7/224 (3%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYV--QNELIAEAISLFGE 111
N+ T ++ Y + G V A +FD + +W +++ G V + + +S F E
Sbjct: 145 NEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTE 204
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
M G + + +F + + L QG + H + +K + L+ SLV MY KCG+
Sbjct: 205 MRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGK 264
Query: 172 IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETML-EFGLYPDTVTFLGVLT 230
+ + R+F + RD + W +MI GL+ + R EAL ++ TM+ E +YP++V +L
Sbjct: 265 VGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILP 324
Query: 231 ACAHAGLVDKGWELFNSMVNS--YGLQPGFDHYISIINLLGRAG 272
+ G E+ ++ S Y QP F H +I+L + G
Sbjct: 325 VLGDVKALKLGKEVHAHVLKSKNYVEQP-FVHS-GLIDLYCKCG 366
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 15/188 (7%)
Query: 119 PLNGT-FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
P+N T F+ L A L G+Q+H E + L LV MY CG + D+ +
Sbjct: 108 PVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQK 167
Query: 178 IFSNMAYRDKISWNSMIMG--LSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
+F + SWN+++ G +S R + L+ + M E G+ + + V + A A
Sbjct: 168 VFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGA 227
Query: 236 GLVDKGWE-----LFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNH 290
+ +G + + N + NS L+ S++++ + GKV A V VE +
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLK------TSLVDMYFKCGKVGLARR-VFDEIVERDI 280
Query: 291 AIWGALVG 298
+WGA++
Sbjct: 281 VVWGAMIA 288
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+I Y G + A FD++ + S+ WT++I Y NEL +AI+ F +M++ GF+P
Sbjct: 560 IIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPN 619
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVK------TIYEYDLILENSLVSMYAKCGEIDD 174
TF + ++D+ + + ++ + Y L++E + +CG +++
Sbjct: 620 TFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIE-----LLNRCGRVEE 674
Query: 175 SYRI 178
+ R+
Sbjct: 675 AQRL 678
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 5/286 (1%)
Query: 50 VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLF 109
V + N I + ++ Y G++ A FD M ++D I+WT++IS + +AI +F
Sbjct: 213 VGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMF 272
Query: 110 GEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
M+ H F P T + A L GRQ+H + VK + + D+ + SL+ MYAKC
Sbjct: 273 IGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC 332
Query: 170 GEIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
GEI D ++F M+ R+ ++W S+I + G EA++++ M L + +T + +L
Sbjct: 333 GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSIL 392
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPN 289
AC G + G EL ++ + ++ +++ L + G+ +DA + +LP +
Sbjct: 393 RACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRD 450
Query: 290 HAIWGALVGVC---GLSKTDADVASRATKRLLELDPLNAPGHVALC 332
W A++ C G D + +E +P + C
Sbjct: 451 VVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKAC 496
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 2/239 (0%)
Query: 59 TCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
T ++ Y G++ +FD M +R+++ WTS+I+ + + EAISLF M
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI 382
Query: 119 PLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRI 178
N T + A GSV L G++LH +K E ++ + ++LV +Y KCGE D++ +
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV 442
Query: 179 FSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLV 238
+ RD +SW +MI G S G SEAL + M++ G+ P+ T+ L ACA++ +
Sbjct: 443 LQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502
Query: 239 DKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALV 297
G + + ++ L F ++I++ + G V +A +P E N W A++
Sbjct: 503 LIGRSIHSIAKKNHALSNVFVGS-ALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMI 559
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 123/239 (51%), Gaps = 4/239 (1%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+IS + G + A +FDSMP+++++ WT+MI GY++ L EA +LF + + HG
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 121 NGT-FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
N F L A + GRQ+HG VK + +LI+E+SLV YA+CGE+ + R F
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVK-VGVGNLIVESSLVYFYAQCGELTSALRAF 241
Query: 180 SNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
M +D ISW ++I S G +A+ ++ ML P+ T +L AC+ +
Sbjct: 242 DMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALR 301
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVG 298
G ++ +S+V ++ S++++ + G++ D + V N W +++
Sbjct: 302 FGRQV-HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK-VFDGMSNRNTVTWTSIIA 358
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
Y G+ A ++ +P RD ++WT+MISG +EA+ EM+ G P T+
Sbjct: 430 YCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTY 489
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+ A + L GR +H + K ++ + ++L+ MYAKCG + +++R+F +M
Sbjct: 490 SSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE 549
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTAC 232
++ +SW +MIMG + +G EAL + M G D F +L+ C
Sbjct: 550 KNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 52 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
+ N + +I Y G V +A +FDSMP+++ ++W +MI GY +N EA+ L
Sbjct: 518 LSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYR 577
Query: 112 MMAHGFSPLNGTFAVLFGAMGSV 134
M A GF + FA + G +
Sbjct: 578 MEAEGFEVDDYIFATILSTCGDI 600
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMIMGLSDH 200
+++H M +K + + N+L+S + G++ + ++F +M ++ ++W +MI G +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 201 GRASEALTVYETMLEFGL-YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFD 259
G EA ++E ++ G+ + + F+ +L C+ + G ++ +MV + G
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMV-----KVGVG 216
Query: 260 HYI---SIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVC 300
+ I S++ + G++ A + E + W A++ C
Sbjct: 217 NLIVESSLVYFYAQCGELTSALR-AFDMMEEKDVISWTAVISAC 259
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 132/261 (50%), Gaps = 3/261 (1%)
Query: 77 LFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV-- 134
L+ S+P + S+++ + + + I +FG M+ G T + + A+
Sbjct: 373 LYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLP 432
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNSMI 194
L +H +K+ Y D+ + SL+ Y K G+ + S ++F + + S+I
Sbjct: 433 ESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSII 492
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G + +G ++ + + M L PD VT L VL+ C+H+GLV++G +F+S+ + YG+
Sbjct: 493 NGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGI 552
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRAT 314
PG Y +++LLGRAG V+ AE +L+ + + W +L+ C + + + + RA
Sbjct: 553 SPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNET-IGRRAA 611
Query: 315 KRLLELDPLNAPGHVALCNIY 335
+ L+ L+P N ++ + Y
Sbjct: 612 EVLMNLEPENFAVYIQVSKFY 632
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 114/240 (47%), Gaps = 15/240 (6%)
Query: 74 ACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
A LFD M DR+ ++ + Q ++ M G + T+ +
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 134 VAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWNS 192
+ +G+QLH + VK+ + ++ + N LV Y+ CG++ S R F+ + +D ISWNS
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNS 285
Query: 193 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
++ +D+G ++L ++ M +G P F+ L C+ + G + ++ Y
Sbjct: 286 IVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQ-----IHCY 340
Query: 253 GLQPGFD----HYIS-IINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSK 304
L+ GFD H S +I++ G+ ++++ LP +E +++ +L+ CG++K
Sbjct: 341 VLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMH-CGITK 399
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%)
Query: 62 ISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
I + +G + A + FD M RD + + +ISG + AI L+ EM++ G
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
TF + + +G Q+H + + ++ + ++LV +YA +D + ++F
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 182 MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
M R+ N ++ G + VY M G+ + +T+ ++ C+H LV +G
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 242 WELFNSMVNS 251
+L + +V S
Sbjct: 233 KQLHSLVVKS 242
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 52 IRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGE 111
I N ++ Y + G + + F+++P++D I+W S++S + +++ LF +
Sbjct: 246 ISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSK 305
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEY-DLILENSLVSMYAKCG 170
M G P F + + G+Q+H +K ++ L ++++L+ MY KC
Sbjct: 306 MQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCN 365
Query: 171 EIDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
I++S ++ ++ + NS++ L G + + ++ M++ G D VT VL
Sbjct: 366 GIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLK 425
Query: 231 A 231
A
Sbjct: 426 A 426
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 182/375 (48%), Gaps = 22/375 (5%)
Query: 10 YASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTCMISGY 65
Y S +E L+ D + S+I GY Q L+ A ++F+ +P+ RN++A+T +I G
Sbjct: 240 YVSKIVEAGLDP-DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 66 LSAGQVFKACDLFDSMPDRDSI----AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
A ++ +A DLF M D + +T +I +E +EA++L EM G P
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 122 GTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSN 181
T+ VL ++ S ++ R+L G ++ ++I N+L++ Y K G I+D+ +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 182 MAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGL 237
M R + ++N +I G +A+ V MLE + PD VT+ ++ +G
Sbjct: 419 MESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 238 VDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWG 294
D + L S++N GL P Y S+I+ L ++ +V++A + L V PN ++
Sbjct: 478 FDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 295 ALV-GVCGLSKTDADVASRATKRLLELDPL-NAPGHVALCNIYAANDRHIELTSLRKEMR 352
AL+ G C K D A +++L + L N+ AL + A+ + E T L ++M
Sbjct: 537 ALIDGYCKAGKVDE--AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 353 IKGVRKAPGCSWILV 367
G++ IL+
Sbjct: 595 KIGLQPTVSTDTILI 609
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 15/270 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI----AWTCMISGYLSAGQVFKACDLF 78
D + NS+I+G ++G + A L + R + +T MI + +V +ACDLF
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 79 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
DS+ + + + +T++I GY + + EA + +M++ P + TF L + +
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISW 190
L + L VK + + + L+ K G+ D +Y F M D ++
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
+ I GR +A + M E G+ PD T+ ++ G + +++ M +
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Query: 251 SYGLQPGFDHYISIIN--LLGRAGKVKDAE 278
+ G +P ++S+I L + GK K +E
Sbjct: 701 T-GCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 117/277 (42%), Gaps = 14/277 (5%)
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
+ ++++ + L+ E ++ EM+ P T+ + + +++ Q
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMIMGLSDHGRA 203
V+ + D SL+ Y + ++D ++++F+ M R+++++ +I GL R
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
EA+ ++ M + +P T+ ++ + + + L M + G++P Y
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET-GIKPNIHTYTV 363
Query: 264 IINLLGRAGKVKDAEEFV---LRLPVEPNHAIWGALV-GVC--GLSKTDADVASRATKRL 317
+I+ L K + A E + L + PN + AL+ G C G+ + DV R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR- 422
Query: 318 LELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIK 354
+L P N + L Y ++ H + L K + K
Sbjct: 423 -KLSP-NTRTYNELIKGYCKSNVHKAMGVLNKMLERK 457
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 18/297 (6%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKA----QELFDTVPIRNKIAWTCMISGYLSAGQVFKACD 76
+ D+ + N++I GY + G +A E+ + I +T +I AG + +A +
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 77 LFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMG 132
D M R + +T+++ G+ Q + EA + EM +GFSP T+ L
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 133 SVAYLDQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DK 187
++ L M+ K + D++ ++++S + + ++D++ R+ M + D
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSP-DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
I+++S+I G + R EA +YE ML GL PD T+ ++ A G ++K +L N
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 248 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALVGVCG 301
MV G+ P Y +IN L + + ++A+ +L+L E P+ + L+ C
Sbjct: 546 MVEK-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 138/313 (44%), Gaps = 31/313 (9%)
Query: 2 YSVFGLMDYASNAL-EGNLNNFDDQ--SLNSMINGYVQAGQLEKAQELFDTVPIR----N 54
+S G M+ A L E N N F + N++ING+ G++E A + + + + +
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 55 KIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFG 110
++++ ++SG+ + V +A + M ++ D+I ++S+I G+ + EA L+
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 111 EMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCG 170
EM+ G P T+ L A L++ QLH V+ D++ + L++ K
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 171 EIDDSYRIFSNMAYRDKI-------------------SWNSMIMGLSDHGRASEALTVYE 211
++ R+ + Y + + S S+I G G +EA V+E
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 212 TMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA 271
+ML PD + ++ AG + K + L+ MV S G I+++ L +
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS-GFLLHTVTVIALVKALHKE 688
Query: 272 GKVKDAEEFVLRL 284
GKV + ++ +
Sbjct: 689 GKVNELNSVIVHV 701
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 136/314 (43%), Gaps = 20/314 (6%)
Query: 68 AGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL 127
A VFK ++ +S + + +I G+ I A++LF +M G P T+ L
Sbjct: 189 AENVFK--EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTL 246
Query: 128 FGAMGSVAYLDQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR- 185
+ +D G + L M +K + E +LI N +++ + G + + + + M R
Sbjct: 247 IDGYCKLRKIDDGFKLLRSMALKGL-EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 186 ---DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 242
D++++N++I G G +AL ++ ML GL P +T+ ++ + AG +++
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 243 ELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-G 298
E + M GL P Y ++++ + G + +A + + P+ + AL+ G
Sbjct: 366 EFLDQM-RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 299 VCGLSKTDADVASRATKRLLELDPLNAPGHVAL---CNIYAANDRHIELTSLRKEMRIKG 355
C K + +A + L P L C Y + E +++EM KG
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD----EALRVKREMVEKG 480
Query: 356 VRKAPGCSWILVKG 369
++ L++G
Sbjct: 481 IKPDTITYSSLIQG 494
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 10/204 (4%)
Query: 102 IAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH-GMQVKTIYEYDLILEN 160
I+ A ++F EM+ SP T+ +L +D L M+ K +++ N
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP-NVVTYN 244
Query: 161 SLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEF 216
+L+ Y K +IDD +++ +MA + + IS+N +I GL GR E V M
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 217 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKD 276
G D VT+ ++ G + + M+ +GL P Y S+I+ + +AG +
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 277 AEEFVLRLPVE---PNHAIWGALV 297
A EF+ ++ V PN + LV
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLV 387
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 17/249 (6%)
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
G V L++ R +H I D ++++ MY+ C DD+ +F+ M R+ +W
Sbjct: 123 GEVEALEEARVVHD----CITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWG 178
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
+MI L+ +G A+ ++ +E G PD F V AC G +++G F SM
Sbjct: 179 TMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRD 238
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 311
YG+ + Y+++I +L G + +A +FV R+ VEP+ +W L+ +C + ++
Sbjct: 239 YGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGY-LELGD 297
Query: 312 RATKRLLELDP--LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKG 369
R + + +LD ++ + L A++ +L LR + +R P K
Sbjct: 298 RFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRY---CQMIRDDP-------KK 347
Query: 370 RVHVFSSGD 378
R+H F +GD
Sbjct: 348 RMHEFRAGD 356
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 137/290 (47%), Gaps = 16/290 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI----AWTCMISGYLSAGQVFKACDLF 78
D Q LN+ ++ +AG+ EK + +F+ + R + +++ +I G + AG + +LF
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 79 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
SM ++ D+ A+ +I G+ + + +A L EM GF P T+ + + +
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 190
LD+ L E ++++ +SL+ + K G ID++Y I + + + +W
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
NS++ L +EAL +++M E P+ VT+ ++ +K + + M
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM-Q 754
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 297
G++P Y ++I+ L +AG + +A R P+ A + A++
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 127/271 (46%), Gaps = 14/271 (5%)
Query: 15 LEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI----AWTCMISGYLSAGQ 70
+E N D+ + SMI +A +L++A E+F+ + ++ A+ MI GY SAG+
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 71 VFKACDLFDSMPDRDSI----AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAV 126
+A L + + SI A+ +++ + + EA+ +F EM +P T+ +
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNI 382
Query: 127 LFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR- 185
L + LD +L K ++ N +V K ++D++ +F M Y+
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 186 ---DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGW 242
D+I++ S+I GL GR +A VYE ML+ +++ + ++ + G + G
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 243 ELFNSMVNSYGLQPGFDHYISIINLLGRAGK 273
+++ M+N P + ++ + +AG+
Sbjct: 503 KIYKDMINQ-NCSPDLQLLNTYMDCMFKAGE 532
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 36/328 (10%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACD-------LFDSMP 82
M+ G V+A +L +E +D V + K + S Y + F A + LF M
Sbjct: 139 MVLGCVKANKL---REGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195
Query: 83 D---RDSI-AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ ++ +T++I G+ + + A+SL EM + + V + G V +D
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255
Query: 139 QG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI----SWNSM 193
+ H ++ + + D + S++ + K +D++ +F ++ ++ ++N+M
Sbjct: 256 MAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
IMG G+ EA ++ E G P + + +LT G VD+ ++F M
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA 374
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE-----PNHAIWGALVG-VCGLSKTDA 307
P Y +I++L RAGK+ A F LR ++ PN +V +C K D
Sbjct: 375 --PNLSTYNILIDMLCRAGKLDTA--FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD- 429
Query: 308 DVASRATKRLLELD-PLNAPGHVALCNI 334
A E+D + P + C++
Sbjct: 430 ----EACAMFEEMDYKVCTPDEITFCSL 453
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 14/265 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTV----PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
N+MI GY AG+ ++A L + I + IA+ C+++ G+V +A +F+ M
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK- 370
Query: 84 RDSI----AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
+D+ + +I + + A L M G P T ++ + LD+
Sbjct: 371 KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD----KISWNSMIM 195
+ + D I SL+ K G +DD+Y+++ M D I + S+I
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
+HGR + +Y+ M+ PD + AG +KG +F + +
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE-IKARRFV 549
Query: 256 PGFDHYISIINLLGRAGKVKDAEEF 280
P Y +I+ L +AG + E
Sbjct: 550 PDARSYSILIHGLIKAGFANETYEL 574
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR 84
S+I+G + +L++A LF+ + N + ++ +I G+ G++ +A + + + +
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 85 ----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD-- 138
+ W S++ V+ E I EA+ F M +P T+ +L + V +
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 139 ----QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF----SNMAYRDKISW 190
Q Q GM+ TI +++S AK G I ++ +F +N D +
Sbjct: 747 FVFWQEMQKQGMKPSTISY------TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGL 218
N+MI GLS+ RA +A +++E GL
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 105/236 (44%), Gaps = 13/236 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
N I+ + + G+++ A + F + +++ +T MI A ++ +A ++F+ +
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 84 RDSI----AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
+ A+ +MI GY EA SL A G P + + + + +D+
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA----YRDKISWNSMIM 195
++ ++K +L N L+ M + G++D ++ + +M + + + N M+
Sbjct: 362 ALKVFE-EMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
L + EA ++E M PD +TF ++ G VD ++++ M++S
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 21/264 (7%)
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
G L + + +HG ++ DL + L+ MY+ CG +++ +F M+ ++ +W
Sbjct: 265 GEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWC 324
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
+I + +G +A+ ++ E G PD F G+ AC G VD+G F SM
Sbjct: 325 IIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRD 384
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVAS 311
YG+ P + Y+S++ + G + +A EFV R+P+EPN +W L+ + + + ++
Sbjct: 385 YGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRV-HGNLELGD 443
Query: 312 RATKRLLELDP--LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL--V 367
+ + LDP LN + A++ +E SL+K S IL V
Sbjct: 444 YCAEVVEFLDPTRLNKQSREGFIPVKASD---VEKESLKKR------------SGILHGV 488
Query: 368 KGRVHVFSSGDRLEPHVEDILLQI 391
K + F +GD P D L Q+
Sbjct: 489 KSSMQEFRAGDTNLPE-NDELFQL 511
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 136/290 (46%), Gaps = 18/290 (6%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR- 84
+I+G + G L+ A LF+ + ++ N I + +I G+ +AG+ L M R
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 85 ---DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+ + ++ +I +V+ + EA L EM+ G +P T+ L +LD+
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGL 197
Q+ + V + ++ N L++ Y K IDD +F M+ R D +++N++I G
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
+ G+ + A +++ M+ + P+ VT+ +L G +K E+F + S ++
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS-KMELD 507
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSK 304
Y II+ + A KV DA + LP V+P + ++G GL K
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG--GLCK 555
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D + S+I+G+ + L+KA ++ D + + N + +I+GY A ++ +LF
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 79 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
M R D++ + ++I G+ + + A LF EM++ P T+ +L +
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI----SW 190
++ ++ K+ E D+ + N ++ ++DD++ +F ++ + ++
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
N MI GL G SEA ++ M E G PD T+
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 123/266 (46%), Gaps = 15/266 (5%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLF 109
N I ++ +I+G G+V +A +L D M + D I ++++G + AEA+ L
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 110 GEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ-LHGMQVKTIYEYDLILENSLVSMYAK 168
+M+ +G P T+ + M + L M+ + I + D + + ++ K
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI-KLDAVKYSIIIDGLCK 275
Query: 169 CGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 224
G +D+++ +F+ M + + I++N +I G + GR + + M++ + P+ VT
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV--- 281
F ++ + G + + EL M++ G+ P Y S+I+ + + A + V
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 282 LRLPVEPNHAIWGALV-GVCGLSKTD 306
+ +PN + L+ G C ++ D
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRID 420
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 143/363 (39%), Gaps = 36/363 (9%)
Query: 25 QSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTC-----------------MISGYLS 67
+ L+S ++ +VQ LE + N++++ C + SG +
Sbjct: 7 RRLSSQVSKFVQPRLLETGTLRIALINCPNELSFCCERGFSAFSDRNLSYRERLRSGLVD 66
Query: 68 AGQVFKACDLFDSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 123
+ A DLF M P I ++ + S + + ++L +M G + T
Sbjct: 67 I-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
+++ L G +K YE + I ++L++ G + ++ + M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 184 ----YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
D I+ N+++ GL G+ +EA+ + + M+E+G P+ VT+ VL +G
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGAL 296
EL M ++ Y II+ L + G + +A + + N + L
Sbjct: 246 LAMELLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 297 V-GVCGLSKTD--ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRI 353
+ G C + D A + KR +++P N L + + + E L KEM
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKR--KINP-NVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 354 KGV 356
+G+
Sbjct: 362 RGI 364
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 139/292 (47%), Gaps = 20/292 (6%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNK------IAWTCMISGYLSAGQVFKACD 76
D + NS+I GY + G + A E+ +RNK ++T ++ G+ G++ +A +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHD--MRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 77 LFDSMP----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMG 132
+ + M +++ + +IS + + I EA+ +F EM G P TF L +
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 133 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKI 188
V + L + + + N+L++ + + GEI ++ ++ + M ++ D+I
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
++NS+I GL G +A +++E ML G P ++ ++ +G+V++ E M
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 249 VNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 297
V G P + S+IN L RAG+++D +L E P+ + L+
Sbjct: 626 V-LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 14/291 (4%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
DD + ++NG + G+++ A++LF +P + + +I G+++ G++ A + M
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 83 DR-----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
D + S+I GY + L+ A+ + +M G P ++ +L + +
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSM 193
D+ + + + + N L+S + K I ++ IF M + D ++NS+
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I GL + AL + M+ G+ +TVT+ ++ A G + + +L N MV G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ-G 559
Query: 254 LQPGFDHYISIINLLGRAGKVKDAE---EFVLRLPVEPNHAIWGALV-GVC 300
Y S+I L RAG+V A E +LR P++ L+ G+C
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 116/280 (41%), Gaps = 52/280 (18%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTCMISGYLSAGQVFKACDLFDSM 81
S +++G+ + G++++A + + + N + + C+IS + ++ +A ++F M
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 82 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
P + D + S+ISG + + I A+ L +M++ G T+ L A +
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--------------- 182
+ R+L V D I NSL+ + GE+D + +F M
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 183 ------------------------AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
+ D +++NS+I GL GR + LT++ + G+
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
PDTVTF +++ G V L + G++ GF
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDE-----GIEDGF 700
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 40/292 (13%)
Query: 105 AISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVS 164
A ++F +M++ P TF V+ A +V +D L K + ++ +L+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 165 MYAKCGEIDDSYRIFSNM----AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 220
+KC ++++ ++ M D ++N +I+GL R +EA + ML G P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 221 DTVTFLGVLTACAHAGLVDKGWELF-------------------------------NSMV 249
D +T+ ++ G VD +LF + MV
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 250 NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCGLSKT 305
SYG+ P Y S+I + G V A E + + +PN + LV G C L K
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 306 DADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
D L P N G L + + R E + +EM KG +
Sbjct: 441 DEAYNVLNEMSADGLKP-NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 18/243 (7%)
Query: 17 GNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQV 71
G++ + D + SMI+GY +AG++ +A L D + +R + + ++ GY AG++
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM-LRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 72 FKACDL------FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 125
A ++ F PD + +TS+I GY + +++ L+ EM A G P T++
Sbjct: 329 LTAEEIRGKMISFGCFPD--VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 126 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 185
+L A+ + L + R+L G + N ++ + K G+++++ I M +
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 186 ----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
DKI++ +I+G GR EA++++ M+ G PD +T +L+ AG+ +
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Query: 242 WEL 244
+ L
Sbjct: 507 YHL 509
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 53/305 (17%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQEL------FDTVPIRNKIAWTCMISGYLSAGQVFKACD 76
D ++ N +I G G+ EKA EL F P + + + +I G+ + ++ KA +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP--DIVTYNTLIQGFCKSNELNKASE 262
Query: 77 LFD-----SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 131
+F S+ D + +TSMISGY + + EA SL +M+ G P N TF VL
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--------- 182
+ ++ G + D++ SL+ Y + G++ +R++ M
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 183 --------------------------AYRDKIS----WNSMIMGLSDHGRASEALTVYET 212
A +D I +N +I G G+ +EA + E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 213 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 272
M + PD +TF ++ G + + +F+ MV + G P S+++ L +AG
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV-AIGCSPDKITVSSLLSCLLKAG 501
Query: 273 KVKDA 277
K+A
Sbjct: 502 MAKEA 506
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 51/296 (17%)
Query: 27 LNSMINGYVQAGQLEKAQELFDT----VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
+NS++N V+ ++E A +LFD + + +I G G+ KA +L M
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 83 ----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ D + + ++I G+ ++ + +A +F ++ + GSV
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-----------------GSVC--- 273
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMI 194
D++ S++S Y K G++ ++ + +M Y +++N ++
Sbjct: 274 --------------SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G + G A + M+ FG +PD VTF ++ G V +G+ L+ M N+ G+
Sbjct: 320 DGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM-NARGM 378
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCGLSKTD 306
P Y +IN L ++ A E + +L + P ++ ++ G C K +
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 108 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL----ILENSLV 163
+F M + G SP N L + + ++G+ LH + +++ ++ NSL+
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSS-----FAEKGK-LHFATALLLQSFEVEGCCMVVNSLL 178
Query: 164 SMYAKCGEIDDSYRIFSN----MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
+ K ++D+ ++F + D ++N +I GL G+A +AL + M FG
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
PD VT+ ++ + ++K E+F + + P Y S+I+ +AGK+++A
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 280 FV---LRLPVEPNHAIWGALV 297
+ LRL + P + + LV
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLV 319
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 121/243 (49%), Gaps = 18/243 (7%)
Query: 17 GNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQV 71
G++ + D + SMI+GY +AG++ +A L D + +R + + ++ GY AG++
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM-LRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 72 FKACDL------FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA 125
A ++ F PD + +TS+I GY + +++ L+ EM A G P T++
Sbjct: 329 LTAEEIRGKMISFGCFPD--VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 126 VLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR 185
+L A+ + L + R+L G + N ++ + K G+++++ I M +
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKK 446
Query: 186 ----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG 241
DKI++ +I+G GR EA++++ M+ G PD +T +L+ AG+ +
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Query: 242 WEL 244
+ L
Sbjct: 507 YHL 509
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 53/305 (17%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQEL------FDTVPIRNKIAWTCMISGYLSAGQVFKACD 76
D ++ N +I G G+ EKA EL F P + + + +I G+ + ++ KA +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP--DIVTYNTLIQGFCKSNELNKASE 262
Query: 77 LFD-----SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 131
+F S+ D + +TSMISGY + + EA SL +M+ G P N TF VL
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--------- 182
+ ++ G + D++ SL+ Y + G++ +R++ M
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 183 --------------------------AYRDKIS----WNSMIMGLSDHGRASEALTVYET 212
A +D I +N +I G G+ +EA + E
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 213 MLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 272
M + PD +TF ++ G + + +F+ MV + G P S+++ L +AG
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV-AIGCSPDKITVSSLLSCLLKAG 501
Query: 273 KVKDA 277
K+A
Sbjct: 502 MAKEA 506
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 51/296 (17%)
Query: 27 LNSMINGYVQAGQLEKAQELFDT----VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
+NS++N V+ ++E A +LFD + + +I G G+ KA +L M
Sbjct: 174 VNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMS 233
Query: 83 ----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ D + + ++I G+ ++ + +A +F ++ + GSV
Sbjct: 234 GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-----------------GSVC--- 273
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMI 194
D++ S++S Y K G++ ++ + +M Y +++N ++
Sbjct: 274 --------------SPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G + G A + M+ FG +PD VTF ++ G V +G+ L+ M N+ G+
Sbjct: 320 DGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM-NARGM 378
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCGLSKTD 306
P Y +IN L ++ A E + +L + P ++ ++ G C K +
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 108 LFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDL----ILENSLV 163
+F M + G SP N L + + ++G+ LH + +++ ++ NSL+
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSS-----FAEKGK-LHFATALLLQSFEVEGCCMVVNSLL 178
Query: 164 SMYAKCGEIDDSYRIFSN----MAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLY 219
+ K ++D+ ++F + D ++N +I GL G+A +AL + M FG
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEE 279
PD VT+ ++ + ++K E+F + + P Y S+I+ +AGK+++A
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 280 FV---LRLPVEPNHAIWGALV 297
+ LRL + P + + LV
Sbjct: 299 LLDDMLRLGIYPTNVTFNVLV 319
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 13/270 (4%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR- 84
+I+G + G L+ A LF+ + I+ + I + +I G+ +AG+ L M R
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 85 ---DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+ + ++ +I +V+ + EA L EMM G +P T+ L L++
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGL 197
Q+ + + + D++ N L++ Y K IDD +F M+ R + +++N+++ G
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
G+ A +++ M+ + PD V++ +L G ++K E+F + S ++
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS-KMELD 507
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLPVE 287
Y+ II+ + A KV DA + LP++
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 120/255 (47%), Gaps = 17/255 (6%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
NS+I+G+ + +LE+A ++ D + + + + + +I+GY A ++ +LF M
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 84 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
R +++ + +++ G+ Q+ + A LF EM++ P ++ +L + L++
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 195
++ G K+ E D+ + ++ ++DD++ +F ++ + D ++N MI
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD--KGWELFNSMVNSYG 253
L S+A ++ M E G PD +T+ +L AH G D EL M S G
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTY-NILIR-AHLGDDDATTAAELIEEM-KSSG 608
Query: 254 LQPGFDHYISIINLL 268
+IN+L
Sbjct: 609 FPADVSTVKMVINML 623
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 145/359 (40%), Gaps = 23/359 (6%)
Query: 47 FDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM----PDRDSIAWTSMISGYVQNELI 102
F T RN +++ +S L + A DLF M P I + + S + +
Sbjct: 46 FSTFSDRN-LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQY 104
Query: 103 AEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSL 162
++L +M + G + T +++ L G +K YE D ++ N+L
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
Query: 163 VSMYAKCGEIDDSYRIFSNMAYRDK----ISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
++ + ++ + M I+ N+++ GL +G+ S+A+ + + M+E G
Sbjct: 165 LNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGF 224
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
P+ VT+ VL +G EL M ++ Y II+ L + G + +A
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 279 EFVLRLPVEPNHA---IWGALV-GVCGLSKTD--ADVASRATKRLLELDPLNAPGHVALC 332
+ ++ A + L+ G C + D A + KR ++ P N L
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR--KISP-NVVTFSVLI 340
Query: 333 NIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLEPHVEDILLQI 391
+ + + E L KEM +G+ AP + I + F +RLE ++ + L I
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGI--AP--NTITYNSLIDGFCKENRLEEAIQMVDLMI 395
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 142/305 (46%), Gaps = 22/305 (7%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR- 84
+I+ + G + A LF+ + ++ + + ++ +I G + G+ + M R
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 85 ---DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
D + ++++I +V+ + EA L+ EM+ G +P T+ L L +
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGL 197
Q+ + V E D++ + L++ Y K +DD R+F ++ + + I++N++++G
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
G+ + A +++ M+ G+ P VT+ +L G ++K E+F M S + G
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR-MTLG 489
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSK----TDADVA 310
Y II+ + A KV DA L V+P+ + ++G GL K ++AD+
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG--GLCKKGSLSEADML 547
Query: 311 SRATK 315
R K
Sbjct: 548 FRKMK 552
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 123/269 (45%), Gaps = 14/269 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D + +++I+ +V+ G+L +A+EL++ + R + I + +I G+ + +A +F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 79 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
D M + D + ++ +I+ Y + + + + + LF E+ + G P T+ L
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKIS----- 189
L+ ++L V ++ L+ GE++ + IF M + +++
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ-KSRMTLGIGI 492
Query: 190 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
+N +I G+ + + +A +++ ++ + G+ PD VT+ ++ G + + LF M
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 250 NSYGLQPGFDHYISIINLLGRAGKVKDAE 278
F + I I LG +G + E
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 138/347 (39%), Gaps = 25/347 (7%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPIRN-KIAWTCMISGYLSAGQVFKACDLFDSM---- 81
LN + + Q LEK L I K+++ + + +V A DLF+SM
Sbjct: 8 LNRKASNFTQI--LEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSR 65
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
P I + + S + + + M +G T ++ L
Sbjct: 66 PLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAF 125
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA----YRDKISWNSMIMGL 197
+ G K YE D I ++LV+ + G + ++ + M D ++ +++I GL
Sbjct: 126 SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL 185
Query: 198 SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPG 257
GR SEAL + + M+E+G PD VT+ VL +G +LF M ++
Sbjct: 186 CLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKAS 244
Query: 258 FDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCGLSKTDADVASRA 313
Y +I+ L + G DA + ++ + + +L+ G+C K D
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD-----G 299
Query: 314 TKRLLELDPLNAPGHV----ALCNIYAANDRHIELTSLRKEMRIKGV 356
K L E+ N V AL +++ + +E L EM +G+
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 140/295 (47%), Gaps = 18/295 (6%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDLFDSMP 82
S++ G+ + L A ++FD + N ++++ +I G G++ +A L D M
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 83 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
++ + +T +I LI +A +LF EM+ G P T+ VL + ++
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMI 194
+ + VK +I N+L++ Y K G + ++ + + M R + ++N ++
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
GL G+ +A+ + + ML+ GL PD V++ ++ G ++ ++L +SM N + +
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM-NCFDI 472
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFV---LRLPVEPNHAIWGALV-GVCGLSKT 305
+P + +IIN + GK A F+ LR + + L+ GVC + KT
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 16/285 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
N++INGY + G++ A EL + R N + ++ G G+ +KA L M D
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 84 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
D +++ +I G + + A L M P TF + A D
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI----SWNSMIM 195
G+ ++ D + +L+ K G+ D+ I + + S N ++
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
LS + E L + + + GL P VT+ ++ +G + + + M S G
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS-GCL 613
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV 297
P Y IIN L + G+V++AE+ + + V PNH + +V
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 101/222 (45%), Gaps = 10/222 (4%)
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
++S++ + +L A + M A GF + + A+ Y +
Sbjct: 162 CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKI 221
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR-----DKISWNSMIMGLSDHGR 202
+K + D + SL+ + + + D+ ++F M+ + +S++ +I GL + GR
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 203 ASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYI 262
EA + + M E G P T T+ ++ A GL+DK + LF+ M+ G +P Y
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI-PRGCKPNVHTYT 340
Query: 263 SIINLLGRAGKVKDAEEFVLRL---PVEPNHAIWGALV-GVC 300
+I+ L R GK+++A ++ + P+ + AL+ G C
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 161/359 (44%), Gaps = 24/359 (6%)
Query: 13 NALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF---DTVPIR-NKIAWTCMISGYLSA 68
N +E D N++I+ + ++ A LF +T IR N + ++ +IS S
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 69 GQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
G+ A L M ++ + + + ++I +V+ EA L+ +M+ P T+
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L LD+ +Q+ V D++ N+L+ + K ++D +F M++
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH 428
Query: 185 R----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
R D +++ ++I GL G A V++ M+ G+ PD +T+ +L + G ++K
Sbjct: 429 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 488
Query: 241 GWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGA 295
E+F+ M S + D YI ++I + +AGKV D + L V+PN +
Sbjct: 489 ALEVFDYMQKS---EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 296 LV-GVCGLSKTDADVASRATKRLLELDPL-NAPGHVALCNIYAANDRHIELTSLRKEMR 352
++ G+C SK A K++ E PL N+ + L + + L +EMR
Sbjct: 546 MISGLC--SKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 131/293 (44%), Gaps = 21/293 (7%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTV------PIRNKIAWTCMISGYLSAGQVFKACDLFD 79
+ N +IN + + Q+ A L + P + + + +++GY ++ A L D
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 80 SMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
M + D+I +T++I G + +EA++L M+ G P T+ V+ +
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWN 191
D L E D+++ N+++ K +DD+ +F M + + ++++
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
S+I L +GR S+A + M+E + P+ VTF ++ A G + +L++ M+
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 252 YGLQPGFDHYISIIN---LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVC 300
+ P Y S++N + R K K EF++ P+ + L+ G C
Sbjct: 360 -SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 13/183 (7%)
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
G L+ R +H + + D+ N+++ MY+ C +DD+ ++F M WN
Sbjct: 130 GKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMP-----EWN 184
Query: 192 S-----MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 246
S M+ ++G EA+ ++ E G P+ F V + C G V +G F
Sbjct: 185 SGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQ 244
Query: 247 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTD 306
+M YG+ P +HY S+ +L +G + +A FV R+P+EP+ +W L+ LS+
Sbjct: 245 AMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLM---NLSRVH 301
Query: 307 ADV 309
DV
Sbjct: 302 GDV 304
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 154/346 (44%), Gaps = 22/346 (6%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
+++I+ + G ++ A LF + + + + + ++ G AG+ L M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 84 RD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
R+ I + ++ +V+ + EA L+ EM+ G SP T+ L L +
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 195
+ + V+ D++ SL+ Y +DD ++F N++ R + ++++ ++
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G G+ A +++ M+ G+ PD +T+ +L G ++K E+F + S +
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-KMD 470
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDADVASR 312
G Y +II + + GKV+DA LP V+PN + ++ GL K + +
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS--GLCKKGSLSEAN 528
Query: 313 ATKRLLELDPLNAPGHVALCNIYAANDRHIELTS---LRKEMRIKG 355
R +E D NAP + A+ R +LT+ L +EM+ G
Sbjct: 529 ILLRKMEEDG-NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 123/259 (47%), Gaps = 15/259 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNK-----IAWTCMISGYLSAGQVFKACDLFDSMP 82
N++++GY +L +A + D + +RNK + +T +I GY +V +F ++
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLM-VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 83 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
R +++ ++ ++ G+ Q+ I A LF EM++HG P T+ +L + L+
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMI 194
+ ++ K+ + +++ +++ K G+++D++ +F ++ + + +++ MI
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
GL G SEA + M E G P+ T+ ++ A G + +L M S G
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM-KSCGF 574
Query: 255 QPGFDHYISIINLLGRAGK 273
+I++L A K
Sbjct: 575 SADASSIKMVIDMLLSAMK 593
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 134/316 (42%), Gaps = 38/316 (12%)
Query: 60 CMISGYLSAGQVFKACDL-FDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFS 118
C IS + F +C+ F S+ + + + SG V + +AI+LF EM+
Sbjct: 33 CTISSF------FSSCERDFSSISNGNVCFRERLRSGIVDIKK-DDAIALFQEMIRSRPL 85
Query: 119 PLNGTFAVLFGAMGSVA----YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDD 174
P F+ F A+ LD +QL + +++ N +++ + +C +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI----AHNIYTLNIMINCFCRCCKTCF 141
Query: 175 SYRIFSN---MAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLT 230
+Y + + Y D ++N++I GL G+ SEA+ + + M+E G PD VT+ ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 231 ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VE 287
+G +L M ++ Y +II+ L R G + A + ++
Sbjct: 202 GICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260
Query: 288 PNHAIWGALV-GVCGLSKTD------ADVASRATKRLLELDPLNAPGHVALCNIYAANDR 340
+ + +LV G+C K + D+ SR E+ P N L +++ +
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR------EIVP-NVITFNVLLDVFVKEGK 313
Query: 341 HIELTSLRKEMRIKGV 356
E L KEM +G+
Sbjct: 314 LQEANELYKEMITRGI 329
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 143/303 (47%), Gaps = 19/303 (6%)
Query: 28 NSMINGYVQAGQLEKAQELF-DTVPIR---NKIAWTCMISGYLSAGQVFKACDLFDSMP- 82
+++NG + + A L D + + N I ++ ++ ++ G+V +A +LF+ M
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 83 ---DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
D D + ++S+I+G ++ I EA +F M++ G ++ L ++
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY----RDKISWNSMIM 195
G +L + + + N+L+ + + G++D + FS M + D ++N ++
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
GL D+G +AL ++E M + + D VT+ V+ G V++ W LF S+ + GL+
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLK 467
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATK 315
P Y ++++ L G + + E ++ E G + C LS D +++ K
Sbjct: 468 PDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE------GLMKNDCTLSDGDITLSAELIK 521
Query: 316 RLL 318
++L
Sbjct: 522 KML 524
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ----GRQLHGMQVKTIYEYDLILE 159
+AI LF +M+ P F L A+ + D G+++ + ++ DL
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN----DLYTF 123
Query: 160 NSLVSMYAKCGEIDDSYRIFSNM---AYR-DKISWNSMIMGLSDHGRASEALTVYETMLE 215
N +++ + C ++ + I M Y D+++ S++ G R S+A+++ + M+E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 216 FGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVK 275
G PD V + ++ + V+ ++ F + G++P Y +++N L + +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 276 DAEEFV---LRLPVEPNHAIWGALV 297
DA + ++ + PN + AL+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALL 267
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 121/250 (48%), Gaps = 12/250 (4%)
Query: 61 MISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
+I+G+ +VF A DL M + D + + ++I G + L+ +A+ LF M G
Sbjct: 145 LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
Query: 117 FSPLNGTF-AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
T+ +++ G S + D R + M ++ I ++I +++ ++ K G+ ++
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP-NVITFTAVIDVFVKEGKFSEA 263
Query: 176 YRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
+++ M R D ++NS+I GL HGR EA + + M+ G PD VT+ ++
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHA 291
+ VD+G +LF M GL Y +II +AG+ A+E R+ PN
Sbjct: 324 FCKSKRVDEGTKLFREMAQR-GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR 382
Query: 292 IWGALV-GVC 300
+ L+ G+C
Sbjct: 383 TYSILLYGLC 392
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 126/287 (43%), Gaps = 45/287 (15%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVP---IR-NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
N++I+G + G + A ELFD + +R + + + +++G +G+ A L M
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 84 RD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
RD I +T++I +V+ +EA+ L+ EM P T+ L + +D+
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 195
+Q+ + V D++ N+L++ + K +D+ ++F MA R D I++N++I
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 196 GLSDHG--------------------------------RASEALTVYETMLEFGLYPDTV 223
G G R +AL ++E M + + D
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGR 270
T+ V+ G V+ W+LF S+ + GL+P Y ++I+ R
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSL-SCKGLKPDVVSYTTMISGFCR 463
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 111/280 (39%), Gaps = 49/280 (17%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELF------DTVPIRNKIAWTCMISGYLSAGQVFKACD 76
D + NS++ G +G+ A L D VP N I +T +I ++ G+ +A
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP--NVITFTAVIDVFVKEGKFSEAMK 265
Query: 77 LFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMG 132
L++ M R D + S+I+G + + EA + M+ G P T+ L
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 133 SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI-SWN 191
+D+G +L + D I N+++ Y + G D + IFS M R I +++
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYS 385
Query: 192 SMIMGLSDHGRASEALTVYETM----LEF------------------------------- 216
++ GL + R +AL ++E M +E
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK 445
Query: 217 GLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQP 256
GL PD V++ +++ DK L+ M GL P
Sbjct: 446 GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED-GLLP 484
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 134/297 (45%), Gaps = 18/297 (6%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRN----KIAWTCMISGYLSAGQVFKACDLF 78
D + N+++ +G+L++A E+ D + R+ I +T +I V A L
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 79 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
D M DR D + + +++G + + EAI +M + G P T ++ +M S
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 190
+L ++ + ++ N L++ + G + + I M + +S+
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
N ++ G + A+ E M+ G YPD VT+ +LTA G V+ E+ N + +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL-S 441
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL---PVEPNHAIWGALVGVCGLSK 304
S G P Y ++I+ L +AGK A + + + ++P+ + +LVG GLS+
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG--GLSR 496
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 104/237 (43%), Gaps = 9/237 (3%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGE 111
+ + +I+ G + +A D+ + MP +S+++ ++ G+ + + + AI
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
M++ G P T+ + A+ ++ ++ LI N+++ AK G+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 172 IDDSYRIFSNMAYRD----KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
+ ++ M +D I+++S++ GLS G+ EA+ + G+ P+ VTF
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 228 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
++ + D+ + M+N G +P Y +I L G K+A E + L
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 115/238 (48%), Gaps = 14/238 (5%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ N +IN + G L +A ++ + +P N +++ ++ G+ ++ +A + + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 82 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
R D + + +M++ ++ + +A+ + ++ + G SP+ T+ + +
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 138 DQG-RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF---SNMAYR-DKISWNS 192
+ + L M+ K + + D I +SLV ++ G++D++ + F M R + +++NS
Sbjct: 466 GKAIKLLDEMRAKDL-KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 193 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
+++GL + A+ M+ G P+ ++ ++ A+ G+ + EL N + N
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 118 SPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYR 177
S LNG A F + S Y + H V + + + + N+ + + GE+++ ++
Sbjct: 66 SGLNGR-AQKFETLSS-GYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFK 123
Query: 178 IFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACA 233
NM Y D I ++I G G+ +A + E + G PD +T+ +++
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 234 HAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
AG ++ + + M + P Y +I+ L +GK+K A E + R+
Sbjct: 184 KAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 18/285 (6%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
S+I + +L +A+E F + IR + + +T +I G+ G + A F M
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 84 RD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
RD + +T++ISG+ Q + EA LF EM G P + TF L ++
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMIM 195
++H ++ +++ +L+ K G++D + + M + ++NS++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
GL G EA+ + GL DTVT+ ++ A +G +DK E+ M+ GLQ
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQ 558
Query: 256 PGFDHYISIINLLGRAGKVKDAEE---FVLRLPVEPNHAIWGALV 297
P + ++N G ++D E+ ++L + PN + +LV
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 23 DDQSLNSMINGYVQAGQLEKA----QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLF 78
D + +INGY +AG ++ A + N + +T +I G G + A +L
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 79 DSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
M + + S+++G ++ I EA+ L GE A G + T+ L A
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 190
+D+ +++ + + ++ N L++ + G ++D ++ + M + + ++
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
NS++ A +Y+ M G+ PD T+ ++ A + + W LF M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM-K 658
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEE 279
G Y +I + K +A E
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 18/285 (6%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIR-----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
S+I + +L +A+E F + IR + + +T +I G+ G + A F M
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEM-IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 84 RD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
RD + +T++ISG+ Q + EA LF EM G P + TF L ++
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMIM 195
++H ++ +++ +L+ K G++D + + M + ++NS++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
GL G EA+ + GL DTVT+ ++ A +G +DK E+ M+ GLQ
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQ 558
Query: 256 PGFDHYISIINLLGRAGKVKDAEE---FVLRLPVEPNHAIWGALV 297
P + ++N G ++D E+ ++L + PN + +LV
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 23 DDQSLNSMINGYVQAGQLEKA----QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLF 78
D + +INGY +AG ++ A + N + +T +I G G + A +L
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 79 DSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
M + + S+++G ++ I EA+ L GE A G + T+ L A
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 190
+D+ +++ + + ++ N L++ + G ++D ++ + M + + ++
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
NS++ A +Y+ M G+ PD T+ ++ A + + W LF M
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM-K 658
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEE 279
G Y +I + K +A E
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
G L + + +H ++ D+ NS++ MY+ CG ++D+ +F++M R+ +W
Sbjct: 192 GDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWC 251
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
+I + +G+ +A+ + + G PD F + AC G +++G F SM
Sbjct: 252 GVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKE 311
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGLSKTDAD--V 309
YG+ P +HY+S++ +L G + +A FV + EPN +W L+ LS+ D +
Sbjct: 312 YGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLM---NLSRVHGDLIL 366
Query: 310 ASRATKRLLELD 321
R + +LD
Sbjct: 367 GDRCQDMVEQLD 378
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 33 GYVQAGQLEKAQELFDT--VPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRDSIAWT 90
G QA Q K F T V I + A+ +I Y G V A +F+SMP+R+ W
Sbjct: 192 GDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWC 251
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 150
+I + +N +AI F G P F +F A G + +++G + ++
Sbjct: 252 GVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGL----LHFES 307
Query: 151 IY-EYDLI--LEN--SLVSMYAKCGEIDDSYRIFSNM 182
+Y EY +I +E+ SLV M A+ G +D++ R +M
Sbjct: 308 MYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM 344
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 149/333 (44%), Gaps = 23/333 (6%)
Query: 13 NALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF---DTVPIR-NKIAWTCMISGYLSA 68
N +E D N++I+ + ++ A LF +T IR N + ++ +IS S
Sbjct: 174 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 69 GQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
G+ A L M ++ + + + ++I +V+ EA L +M+ P T+
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L LD+ +Q+ V DL N+L+ + K ++D +F M++
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 185 R----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
R D +++ ++I GL G A V++ M+ G+ PD +T+ +L + G ++K
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 241 GWELFNSMVNSYGLQPGFDHYI--SIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGA 295
E+F+ M S + D YI ++I + +AGKV D + L V+PN +
Sbjct: 414 ALEVFDYMQKS---EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 296 LV-GVCGLSKTDADVASRATKRLLELDPLNAPG 327
++ G+C SK A K++ E PL G
Sbjct: 471 MISGLC--SKRLLQEAYALLKKMKEDGPLPDSG 501
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 115/233 (49%), Gaps = 12/233 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKI----AWTCMISGYLSAGQVFKACDLFDSMPD 83
NS+ING+ +L+KA+++F+ + ++ + +I G+ + +V +LF M
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 84 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
R D++ +T++I G + A +F +M++ G P T+++L + + L++
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEK 413
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 195
++ K+ + D+ + +++ K G++DD + +F +++ + + +++N+MI
Sbjct: 414 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
GL EA + + M E G PD+ T+ ++ A G EL M
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 130/291 (44%), Gaps = 21/291 (7%)
Query: 28 NSMINGYVQAGQLEKAQELFDTV------PIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
N +IN + + Q+ A L + P + + + +++GY ++ A L D M
Sbjct: 49 NILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 82 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
+ D+I +T++I G + +EA++L M+ G P T+ V+ + +
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSM 193
D L E D+++ N+++ K +DD+ +F M + + ++++S+
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I L +GR S+A + M+E + P+ VTF ++ A G + +L + M+
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-S 285
Query: 254 LQPGFDHYISIIN---LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVC 300
+ P Y S+IN + R K K EF++ P+ + L+ G C
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 41/281 (14%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTV----PIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ ++I+ Y++A ++ A ELF+T+ + N + ++ +I G+ AGQV KAC +F+ M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 82 ------PDRD--------------SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLN 121
PD D + + +++ G+ ++ + EA L M G P
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674
Query: 122 GTFAVLFGAMGSVAYLDQGRQL------HGMQVKTIYEYDLILENSLVSMYAKCGEIDDS 175
+ L + V LD+ +++ HG T+Y Y +SL+ Y K D +
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA-TLYTY-----SSLIDRYFKVKRQDLA 728
Query: 176 YRIFSNM----AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTA 231
++ S M + + + MI GL G+ EA + + M E G P+ VT+ ++
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 232 CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAG 272
G ++ EL M S G+ P + Y +I+ + G
Sbjct: 789 FGMIGKIETCLELLERM-GSKGVAPNYVTYRVLIDHCCKNG 828
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 107/231 (46%), Gaps = 33/231 (14%)
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGS-----VAYLDQGRQLHGMQVKTIYEYDLIL 158
+A S+ EM+ GF P T++ + + + +A+L G V +Y Y +++
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 159 ENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSMIMGLSDHGRASEALTVYETML 214
++ + K G I+ + + F+ M + +++ ++I + S A ++ETML
Sbjct: 526 DS-----FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 215 EFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL---------------QPGFD 259
G P+ VT+ ++ AG V+K ++F M S + +P
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 260 HYISIINLLGRAGKVKDAEEFVLRLPV---EPNHAIWGALV-GVCGLSKTD 306
Y ++++ ++ +V++A + + + + EPN ++ AL+ G+C + K D
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 137/288 (47%), Gaps = 16/288 (5%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ N +I G ++A +E AQ++F V I + + ++ Y +G++ + +L+ M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 82 P----DRDSIAWTSMISGYVQNELIAEAISLFGEMMA-HGFSPLNGTFAVLFGAMGSVAY 136
+ ++I +ISG V+ + +A+ L+ ++M+ FSP T+ L +
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNS 192
L + +QL + + + N L++ + K GE D + +F M D +++
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 193 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
++ L GR E L ++ + E GL PD V + ++ + +++ LFN M S
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 253 GLQPGFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALV 297
G+ P Y S+I LG AG V++A + + R +EPN + AL+
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 20/256 (7%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDRDSI----AWTSMISGYVQNELIAEAISLFGE 111
+ +T ++ AG +A D D M D+ + + ++I G ++ + +A+ LFG
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 112 MMAHGFSPLNGTFAVL---FGAMG-SVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYA 167
M + G P T+ V +G G SV+ L+ M+ K I + SL S+ A
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALET---FEKMKTKGIAPNIVACNASLYSL-A 479
Query: 168 KCGEIDDSYRIFSNMA----YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTV 223
K G ++ +IF + D +++N M+ S G EA+ + M+E G PD +
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 224 TFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF--- 280
++ A VD+ W++F M L+P Y +++ LG+ GK+++A E
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRM-KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 281 VLRLPVEPNHAIWGAL 296
+++ PN + L
Sbjct: 599 MVQKGCPPNTITFNTL 614
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 135/290 (46%), Gaps = 17/290 (5%)
Query: 25 QSLNSMINGYVQAGQLEKAQELF---DTVPIR-NKIAWTCMISGYLSAGQVFKACDLFDS 80
+ N++I G ++ +L+ A ELF +++ ++ + I Y +G A + F+
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 81 MPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
M + + +A + + + EA +F + G P + T+ ++ V
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD----KISWNS 192
+D+ +L ++ E D+I+ NSL++ K +D+++++F M +++N+
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 193 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
++ GL +G+ EA+ ++E M++ G P+T+TF + V ++ M++
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD-M 637
Query: 253 GLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEPNHAIWGALVGVCGL 302
G P Y +II L + G+VK+A F ++ ++ V +C L
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM----KKLVYPDFVTLCTL 683
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 158/412 (38%), Gaps = 61/412 (14%)
Query: 26 SLNSMINGYVQAGQLEKAQELF----DTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ N+ + +AG+ +A+++F D + + + + M+ Y G++ +A L M
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 82 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
+ D I S+I+ + + + EA +F M P T+ L +G +
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKISWNSM 193
+ +L V+ + I N+L K E+ + ++ M D ++N++
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I GL +G+ EA+ + M + +YPD VT +L A L++ +++ + + +
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCA 708
Query: 254 LQP----------------GFDHYISIINLLGRAGKVKDA-------------------- 277
QP G D+ +S L G +D
Sbjct: 709 DQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGA 768
Query: 278 ----EEFVLRLPVEPNHAIWGALVGVCGLSKTDADVASRATKRLLELDPLNAPGHVA--- 330
E+F L V+P + L+G GL +AD+ A L++ VA
Sbjct: 769 RTLFEKFTKDLGVQPKLPTYNLLIG--GL--LEADMIEIAQDVFLQVKSTGCIPDVATYN 824
Query: 331 -LCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDRLE 381
L + Y + + EL L KEM I++ G V + D L+
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 30 MINGYVQAGQLEKAQELFDTV------PIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
+I+G ++G+L +A++LF+ + P N + +I+G+ AG+ AC LF M
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRP--NCAIYNILINGFGKAGEADAACALFKRMVK 954
Query: 84 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
D ++ ++ + E + F E+ G +P + ++ +G L++
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEE 1014
Query: 140 GRQL-HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMI 194
L + M+ DL NSL+ G ++++ +I++ + + ++N++I
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
G S G+ A VY+TM+ G P+T T+
Sbjct: 1075 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 142/305 (46%), Gaps = 18/305 (5%)
Query: 28 NSMINGYVQAGQLEKAQELF---DTVPIR-NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
N++I+G + ++ A LF +T IR N + ++ +IS + G+ A L M +
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 84 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
R D ++++I +V+ + EA L+ EM+ P T++ L LD+
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 195
+Q+ V D++ N+L+ + K +++ +F M+ R + +++N +I
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
GL G A +++ M+ G+ P+ +T+ +L G ++K +F + S ++
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KME 498
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCGL-SKTDADVA 310
P Y +I + +AGKV+D + L V+P+ + ++ G C SK +AD
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 311 SRATK 315
+ K
Sbjct: 559 FKEMK 563
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 158/357 (44%), Gaps = 28/357 (7%)
Query: 35 VQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWT 90
++ G+LE +++T+ I G + A +LF M + + + ++
Sbjct: 247 MEQGKLEPGVLIYNTI-----------IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 91 SMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKT 150
S+IS ++A L +M+ +P TF+ L A L + +L+ VK
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 151 IYEYDLILENSLVSMYAKCGEIDDSYRIF----SNMAYRDKISWNSMIMGLSDHGRASEA 206
+ ++ +SL++ + +D++ ++F S + D +++N++I G + R E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 207 LTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN 266
+ V+ M + GL +TVT+ ++ AG D E+F MV S G+ P Y ++++
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV-SDGVPPNIMTYNTLLD 474
Query: 267 LLGRAGKVKDAE---EFVLRLPVEPNHAIWGALV-GVCGLSKTDADVASRATKRLLELDP 322
L + GK++ A E++ R +EP + ++ G+C K + L + P
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 323 LNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWILVKGRVHVFSSGDR 379
+ + + + + E +L KEM+ G GC L++ R+ GDR
Sbjct: 535 -DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR---DGDR 587
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 140/301 (46%), Gaps = 52/301 (17%)
Query: 12 SNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLS 67
S+ +E +N D + +++I+ +V+ G+L +A++L+D + R + + ++ +I+G+
Sbjct: 315 SDMIERKINP-DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 68 AGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGT 123
++ +A +F+ M + D + + ++I G+ + + + E + +F EM G
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG------- 426
Query: 124 FAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
L G +V Y N L+ + G+ D + IF M
Sbjct: 427 ---LVG--NTVTY-----------------------NILIQGLFQAGDCDMAQEIFKEMV 458
Query: 184 YR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVD 239
+ +++N+++ GL +G+ +A+ V+E + + P T+ ++ AG V+
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 240 KGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGAL 296
GW+LF ++ + G++P Y ++I+ R G ++A+ + + PN + L
Sbjct: 519 DGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Query: 297 V 297
+
Sbjct: 578 I 578
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 139/315 (44%), Gaps = 16/315 (5%)
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
++ S P I ++ ++S + ISL +M G + T+++L +
Sbjct: 71 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRS 130
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM---AYR-DKISWN 191
L + G +K YE +++ +SL++ Y I ++ + M Y+ + +++N
Sbjct: 131 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 190
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
++I GL H +ASEA+ + + M+ G PD VT+ V+ G D + L N M
Sbjct: 191 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG 250
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDAD 308
L+PG Y +II+ L + + DA + + PN + +L+ C +
Sbjct: 251 -KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS-CLCNYGRWS 308
Query: 309 VASRATKRLLE--LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGCSWIL 366
ASR ++E ++P + AL + + + +E L EM V+++ S +
Sbjct: 309 DASRLLSDMIERKINP-DVFTFSALIDAFVKEGKLVEAEKLYDEM----VKRSIDPSIVT 363
Query: 367 VKGRVHVFSSGDRLE 381
++ F DRL+
Sbjct: 364 YSSLINGFCMHDRLD 378
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDLFDS 80
+ N++++G + G+LEKA +F+ + R+K+ + MI G AG+V DLF +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQ-RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 81 MPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 130
+ + D +A+ +MISG+ + EA +LF EM G P +G + L A
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 134/285 (47%), Gaps = 16/285 (5%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
NS+I G+ A L + R N + ++ +I ++ G++ +A L+D M
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 84 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
R D ++S+I+G+ ++ + EA +F M++ P T+ L +++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 195
G +L + + + N+L+ + G+ D + +IF M D I+++ ++
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
GL +G+ +AL V+E + + + PD T+ ++ AG V+ GW+LF S+ + G++
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVK 532
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 297
P Y ++I+ R G ++A+ + + PN + L+
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 137/304 (45%), Gaps = 21/304 (6%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTV------PIRNKIAWTCMISGYLSAGQVFKA 74
++D S N +IN + + QL A + + P + + + +++GY ++ +A
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP--DIVTLSSLLNGYCHGKRISEA 169
Query: 75 CDLFDSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 130
L D M +++ + ++I G + +EA++L M+A G P T+ +
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 131 MGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----D 186
+ +D L K E D+++ +++ ++D+ +F+ M + +
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 187 KISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 246
+++NS+I L ++GR S+A + M+E + P+ VTF ++ A G + + +L++
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 247 SMVNSYGLQPGFDHYISIIN---LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCGL 302
M+ + P Y S+IN + R + K E ++ PN + L+ G C
Sbjct: 350 EMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 303 SKTD 306
+ +
Sbjct: 409 KRVE 412
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 133/336 (39%), Gaps = 30/336 (8%)
Query: 38 GQLEKAQELFDTVPI---------RNKIAWTCMISGYLSAGQVFKACDLFDSM----PDR 84
QL KA LF + R K++ ++ L A DLF M P
Sbjct: 24 AQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLD-----DAVDLFGEMVQSRPLP 78
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
+ + ++S + ISL M S ++ +L + L +
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM---AYR-DKISWNSMIMGLSDH 200
G +K YE D++ +SL++ Y I ++ + M Y+ + +++N++I GL H
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
+ASEA+ + + M+ G PD T+ V+ G +D L M ++
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVI 257
Query: 261 YISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDADVASRATKRL 317
Y +II+ L V DA + + PN + +L+ C + ASR +
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR-CLCNYGRWSDASRLLSDM 316
Query: 318 LE--LDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
+E ++P N AL + + + +E L EM
Sbjct: 317 IERKINP-NVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDLFDSMPDR 84
+++G + G+LEKA +F+ + ++K+ + MI G AG+V DLF S+ +
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQ-KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 85 ----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 130
+ I +T+MISG+ + L EA +LF EM G P +GT+ L A
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 16/237 (6%)
Query: 26 SLNSMINGYVQAGQLEKAQELF------DTVPIRNKIAWTCMISGYLSAGQVFKACDLFD 79
+ NS+ING+ +L++AQ++F D +P + + + +I+G+ A +V +LF
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP--DVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 80 SMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
M R +++ +T++I G+ Q A +F +M++ G P T+ L +
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWN 191
L++ + K+ E D+ N + K G+++D + +F +++ + D I++N
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
+MI G G EA T++ M E G PD+ T+ ++ A G EL M
Sbjct: 525 TMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
+LNS++NG+ ++ +A L D + + GY D
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQM----------VEMGY-----------------QPD 169
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHG 145
++ +T+++ G Q+ +EA++L M+ G P T+ + + D L
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHG 201
K E D+++ ++++ K +DD+ +F+ M + D +++S+I L ++G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
R S+A + MLE + P+ VTF ++ A A G + + +LF+ M+ + P Y
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTY 348
Query: 262 ISIINLLGRAGKVKDAEE-FVLRLPVE--PNHAIWGALV-GVCGLSKT 305
S+IN ++ +A++ F L + + P+ + L+ G C K
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 131/289 (45%), Gaps = 17/289 (5%)
Query: 28 NSMINGYVQAGQLEKAQELF---DTVPIRNKI-AWTCMISGYLSAGQVFKACDLFDSMPD 83
+++I+ + ++ A LF D IR + ++ +IS + G+ A L M +
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 84 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
R + + + S+I + + + EA LF EM+ P T+ L LD+
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 195
+Q+ + V D++ N+L++ + K ++ D +F +M+ R + +++ ++I
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G A V++ M+ G++P+ +T+ +L G ++K +F + S ++
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KME 482
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVC 300
P Y + + +AGKV+D + L V+P+ + ++ G C
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 137/322 (42%), Gaps = 20/322 (6%)
Query: 73 KACDLFDSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF 128
+A DLF M P + ++ ++S + + IS +M G S T+ ++
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 129 GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA---YR 185
+ + L + G +K Y ++ NSL++ + I ++ + M Y+
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 186 -DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
D +++ +++ GL H +ASEA+ + E M+ G PD VT+ V+ G D L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 245 FNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCG 301
N M ++ Y ++I+ L + V DA + + P+ + +L+ C
Sbjct: 228 LNKMEKG-KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS-CL 285
Query: 302 LSKTDADVASRATKRLLE--LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKA 359
+ ASR +LE ++P N +L + +A + IE L EM ++++
Sbjct: 286 CNYGRWSDASRLLSDMLERKINP-NVVTFNSLIDAFAKEGKLIEAEKLFDEM----IQRS 340
Query: 360 PGCSWILVKGRVHVFSSGDRLE 381
+ + ++ F DRL+
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLD 362
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 9/228 (3%)
Query: 65 YLSAGQVFKACDLFDSMPDRDSI----AWTSMISGYVQNELIAEAISLFGEMMAHGFSPL 120
+L+ G +KA ++++SM DS+ + +I ++ + A LF +M P
Sbjct: 288 FLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPS 347
Query: 121 NGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFS 180
F+ L +MG LD +++ + + SL+ YAK G++D + R++
Sbjct: 348 FSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWD 407
Query: 181 NM---AYRDKISWNSMIM-GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
M +R +MI+ + G+ A+TV++ M + G P T+ +L A +G
Sbjct: 408 EMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSG 467
Query: 237 LVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
VD +++NSM N+ GL+PG YIS++ LL V A + +L +
Sbjct: 468 QVDSAMKIYNSMTNA-GLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 154/319 (48%), Gaps = 23/319 (7%)
Query: 5 FGLMDYASNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTC 60
FG +D A L ++ D S N++++GY++ G+ +A LFD + + + +
Sbjct: 356 FGRIDDARELL-SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 61 MISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHG 116
+I G +G + A L + M + D I +T+++ G+V+N ++ A ++ EM+ G
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 117 FSPLNGTFAVLFGAMGSVAYLDQGR--QLHGMQVKTIYEY-DLILENSLVSMYAKCGE-- 171
P +A A+G + D + +LH V T + DL + N + K G
Sbjct: 475 IKP--DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 172 --IDDSYRIFSNMAYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVL 229
I+ +IF D +++ ++I G ++G+ A +Y+ ML LYP +T+ ++
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 230 TACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE-- 287
A AG +++ ++ +++ + G++P + +++ + +AG + +A ++ ++ E
Sbjct: 593 YGHAKAGRLEQAFQ-YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Query: 288 -PNHAIWGALVGV-CGLSK 304
PN + L+ C K
Sbjct: 652 PPNKYSYTMLISKNCDFEK 670
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 132/319 (41%), Gaps = 48/319 (15%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRN----KIAWTCMISGYLSAGQVFKACDLFDSM 81
+ N+M++ +AG LE+ +++ + RN ++ + +I+G+ G++ +A M
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 82 PDRDSIAWTS-----MISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
R A T +I GY + L +A + EM+ G P T+ + A+
Sbjct: 300 -RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 137 LDQGRQL----------------HG-MQVKTIYEYDLILE--------------NSLVSM 165
+D R+L HG +++ E L+ + N+L+
Sbjct: 359 IDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG 418
Query: 166 YAKCGEIDDSYRIFSNMA----YRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 221
+ G ++ + R+ M + D I++ +++ G +G S A VY+ ML G+ PD
Sbjct: 419 LCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Query: 222 TVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF- 280
+ G DK + L MV + P Y I+ L + G + A EF
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQ 538
Query: 281 --VLRLPVEPNHAIWGALV 297
+ R+ + P+H + ++
Sbjct: 539 RKIFRVGLVPDHVTYTTVI 557
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 50/248 (20%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDLFDS 80
+ +++ G+V+ G L A E++D + +R I A+T G L G KA L +
Sbjct: 446 TYTTLVKGFVKNGNLSMATEVYDEM-LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEE 504
Query: 81 M-------PD---------------------------------RDSIAWTSMISGYVQNE 100
M PD D + +T++I GY++N
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 101 LIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILEN 160
A +L+ EM+ P T+ VL L+Q Q K +++ N
Sbjct: 565 QFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 161 SLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEF 216
+L+ K G ID++YR M +K S+ +I D + E + +Y+ ML+
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Query: 217 GLYPDTVT 224
+ PD T
Sbjct: 685 EIEPDGYT 692
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 124/273 (45%), Gaps = 22/273 (8%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D + NSMI G+ + + + A+ +FD + + + + +I Y A +V + L +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 83 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
R ++ + ++I G+ + + + A LF EM++HG P T +L L+
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMI 194
+ +L + + + D + N ++ K ++D+++ +F ++ D ++N MI
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
G S+A ++ M + G PD T+ ++ C AG +DK EL + M ++
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN--- 636
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 287
GF G A +K AEE + R+ E
Sbjct: 637 --GFS---------GDAFTIKMAEEIICRVSDE 658
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 152/393 (38%), Gaps = 55/393 (13%)
Query: 13 NALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----DTVPIRNKIAWTCMISGYLSA 68
N + G + D + +++NG + G + A L +T + + ++ +I
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 69 GQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
G A LF M ++ + + MI G+ ++A L +M+ +P TF
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L A L + +L + D + NS++ + K DD+ +F MA
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
D +++N++I R E + + + GL +T T+ ++ ++ +L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 245 FNSMVNSYGLQP----------GFDH-------------------------YISIINLLG 269
F M+ S+G+ P GF Y II+ +
Sbjct: 490 FQEMI-SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 270 RAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCGLSK-TDADVASRATKRLLELDPLN 324
+ KV +A + LP VEP+ + ++ G CG S +DA+V K +P N
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDN 607
Query: 325 APGHVAL--CNIYAANDRHIELTSLRKEMRIKG 355
+ + + C D+ IEL S EMR G
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELIS---EMRSNG 637
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 129/310 (41%), Gaps = 32/310 (10%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMP- 82
N +I +V+ + + A L+ + IR N ++ +I + ++ + F +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 83 ---DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF---------------SPLNGTF 124
D + + +++ G + I+EA++LFG M+ GF +P+ TF
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L + + + L V D++ ++V+ K G+ + + S M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 185 R----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
D + ++++I L G S+A ++ MLE G+ P+ T+ ++ G
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALV 297
L M+ + P + ++I+ + GK+ +AE+ +L + P+ + +++
Sbjct: 350 AQRLLRDMIER-EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 298 -GVCGLSKTD 306
G C ++ D
Sbjct: 409 YGFCKHNRFD 418
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 9/230 (3%)
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D ++T +I + + ++ A+S+ G+MM G+ P TF L V + L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDH 200
+ VK+ YE ++++ N+L+ K GE++ + + + M + D +++N+++ GL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
GR S+A + M++ + PD VTF ++ G +D+ EL+ M+ S + P
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNNVT 283
Query: 261 YISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV-GVCGLSKTD 306
Y SIIN L G++ DA++ + + PN + L+ G C D
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 13/277 (4%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D + N+++ G +G+ A + + R + + +T +I ++ G + +A +L+
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 79 DSM----PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
M D +++ + S+I+G + + +A F M + G P T+ L
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 190
+D+G +L + D+ N+L+ Y + G++ + IF M R D I+
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
++ GL +G AL ++ M E Y V + ++ A V+K WELF +
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV 449
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 287
G++P Y +I L + G ++A+E + R+ E
Sbjct: 450 E-GVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 7/196 (3%)
Query: 87 IAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF-AVLFGAMGSVAYLDQGRQLHG 145
+ + ++I G +N + A+ L EM G T+ +L G S + D R L
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 146 MQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHG 201
M ++I D++ +L+ ++ K G +D++ ++ M + +++NS+I GL HG
Sbjct: 237 MMKRSINP-DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 202 RASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHY 261
R +A ++ M G +P+ VT+ +++ +VD+G +LF M + G Y
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM-SCEGFNADIFTY 354
Query: 262 ISIINLLGRAGKVKDA 277
++I+ + GK++ A
Sbjct: 355 NTLIHGYCQVGKLRVA 370
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 15/241 (6%)
Query: 81 MPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
MPD ++ ++I G+ + + + +A+ L EM G S T+ +L A +D+
Sbjct: 174 MPD--VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 141 RQ-LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK----ISWNSMIM 195
L M+ + E DL++ SL+ + CGE+D +F + R I++N++I
Sbjct: 232 MGFLKEMKFMGL-EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
G G+ EA ++E M+E G+ P+ T+ G++ G + +L N M+ +
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK-DEE 349
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFV---LRLPVEPNHAIWGALV-GVCGLSKTDADVAS 311
P Y IIN L + G V DA E V + P++ + L+ G+C +K D D AS
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC--AKGDLDEAS 407
Query: 312 R 312
+
Sbjct: 408 K 408
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 127/272 (46%), Gaps = 15/272 (5%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNK----IAWTCMISGYLSAGQVFKACDLFDSMPDR 84
S+I G+ G+L++ + LFD V R I + +I G+ GQ+ +A ++F+ M +R
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 85 ----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQG 140
+ +T +I G EA+ L M+ P T+ ++ + +
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 141 RQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDS----YRIFSNMAYRDK--ISWNSMI 194
++ + K D I N L+ G++D++ Y + + +Y D IS+N++I
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGL 254
GL R +AL +Y+ ++E D VT +L + AG V+K EL+ + +S +
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 255 QPGFDHYISIINLLGRAGKVKDAEEFVLRLPV 286
+ D Y ++I+ + G + A+ + ++ V
Sbjct: 492 RNS-DTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 116/271 (42%), Gaps = 48/271 (17%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 81
S N++I+G + +L +A +++D + + +++ +++ L AG V KA +L+ +
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 82 PD----RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
D R+S +T+MI G+ + ++ A L +M P
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP------------------ 527
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA----YRDKISWNSM 193
++++Y N L+S K G +D ++R+F M + D +S+N M
Sbjct: 528 ------------SVFDY-----NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIM 570
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
I G G A ++ M GL PD T+ ++ G +D+ F+ MV+S G
Sbjct: 571 IDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS-G 629
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
+P S++ G+ E V +L
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 119/265 (44%), Gaps = 13/265 (4%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 81
S N++I G+ + +LEKA EL + + + + W +I + AG++ +A M
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 82 P----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
+ D + +TS+I G+ + +LF E++ G SP T+ L + L
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK----ISWNSM 193
+ ++ ++ ++ L+ G+ ++ ++ + M +D+ +++N +
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV-NSY 252
I L G ++A+ + E M + PD +T+ +L G +D+ +L M+ +S
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 253 GLQPGFDHYISIINLLGRAGKVKDA 277
P Y ++I+ L + ++ A
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQA 443
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 138/287 (48%), Gaps = 20/287 (6%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDLFDSMP 82
++I G+ AG+ + +L + I+ KI A++ +I ++ G++ +A +L M
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDM-IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344
Query: 83 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
R D++ +TS+I G+ + + +A + M++ G P TF +L +D
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404
Query: 139 QGRQL-HGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSM 193
G +L M ++ + D + N+L+ + + G+++ + +F M R D +S+ +
Sbjct: 405 DGLELFRKMSLRGVVA-DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
+ GL D+G +AL ++E + + + D + ++ +A VD W+LF S+ G
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKG 522
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 297
++P Y +I L + G + +A+ ++ + PN + L+
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 137/331 (41%), Gaps = 57/331 (17%)
Query: 36 QAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSI 87
++GQ A EL + R + + ++ +I G G + A +LF+ M + D I
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 88 AWTSMISG-----------------------------------YVQNELIAEAISLFGEM 112
+T++I G +V+ + EA L EM
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 113 MAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEI 172
+ G SP T+ L LD+ + + V ++ N L++ Y K I
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 173 DDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGV 228
DD +F M+ R D +++N++I G + G+ A +++ M+ + PD V++ +
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463
Query: 229 LTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP--- 285
L G +K E+F + S ++ Y II+ + A KV DA + LP
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKS-KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 286 VEPNHAIWGALVGVCGLSK----TDADVASR 312
V+P+ + ++G GL K ++AD+ R
Sbjct: 523 VKPDVKTYNIMIG--GLCKKGSLSEADLLFR 551
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D + S+I+G+ + QL+KA + D + + N + +I+GY A + +LF
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 79 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
M R D++ + ++I G+ + + A LF EM++ P ++ +L +
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 190
++ ++ K+ E D+ + N ++ ++DD++ +F ++ + D ++
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
N MI GL G SEA ++ M E G P+ T+
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 101/230 (43%), Gaps = 9/230 (3%)
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D++ ++++I+G ++EA+ L M+ G P T L + + L
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDH 200
V+T ++ + + ++ + K G+ + + M R D + ++ +I GL
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G A ++ M G D + + ++ +AG D G +L M+ + P
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVA 319
Query: 261 YISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALV-GVCGLSKTD 306
+ ++I+ + GK+++AEE +++ + P+ + +L+ G C ++ D
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 104 EAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQL-HGMQVKTIYEYDLILENSL 162
+A+ LF EM P F+ LF + D L M++K I ++L + +
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI-AHNLYTLSIM 113
Query: 163 VSMYAKCGEIDDSYRIFSN---MAYR-DKISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
++ +C ++ ++ + Y D ++++++I GL GR SEAL + + M+E G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 219 YPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAE 278
P +T ++ G V L + MV + G QP Y ++ ++ ++G+ A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 279 EFVLRL 284
E + ++
Sbjct: 233 ELLRKM 238
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 127/279 (45%), Gaps = 21/279 (7%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ N++I+G++ G ++A ++F + + +++++ ++ G + A + M
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Query: 82 PDRD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
I +T MI G +N + EA+ L EM G P T++ L V
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494
Query: 138 DQGRQLHGMQVKTIYEYDL----ILENSLVSMYAKCGEIDDSYRIFSNMAY----RDKIS 189
+++ V IY L I+ ++L+ + G + ++ RI+ M RD +
Sbjct: 495 KTAKEI----VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550
Query: 190 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
+N ++ L G+ +EA M G+ P+TV+F ++ ++G K + +F+ M
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 250 NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVEP 288
G P F Y S++ L + G +++AE+F+ L P
Sbjct: 611 K-VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 127/289 (43%), Gaps = 27/289 (9%)
Query: 30 MINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKA----CDLFDSM 81
MI+G + G L++A L + + + + ++ +I+G+ G+ A C ++
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 82 PDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
+ I ++++I + + EAI ++ M+ G + + TF VL ++ + +
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 142 QLHGMQVKTIYEYDLILENS-----LVSMYAKCGEIDDSYRIFSNMA----YRDKISWNS 192
+ M+ T D IL N+ L++ Y GE ++ +F M + ++ S
Sbjct: 569 EF--MRCMT---SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 193 MIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY 252
++ GL G EA +++ DTV + +LTA +G + K LF MV
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR- 682
Query: 253 GLQPGFDHYISIINLLGRAGK----VKDAEEFVLRLPVEPNHAIWGALV 297
+ P Y S+I+ L R GK + A+E R V PN ++ V
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 731
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 120/284 (42%), Gaps = 25/284 (8%)
Query: 19 LNNFDDQSLNSMINGYVQAGQLEKAQELFDTVPIR--NKIAWTC--MISGYLSAGQVFKA 74
L N + + +I Y++ G ++ + E+F + + N +TC ++ + +G+
Sbjct: 158 LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217
Query: 75 CDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGA 130
M R D + +I+ ++ L +M G++P T+ +
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 131 MGSVAYLDQGR------QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
Y +GR L M+ K + + D+ N L+ + I Y + +M
Sbjct: 278 -----YCKKGRFKAAIELLDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 185 R----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
R +++++N++I G S+ G+ A + ML FGL P+ VTF ++ G +
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
++F M+ + GL P Y +++ L + + A F +R+
Sbjct: 392 ALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/416 (18%), Positives = 147/416 (35%), Gaps = 89/416 (21%)
Query: 29 SMINGYVQAGQLEKAQELFDT---VPIR-NKIAWTCMISGYLSAGQVFKACDLFDSMPDR 84
S++ G + G L +A++ + VP + + + +++ +G + KA LF M R
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682
Query: 85 ----DSIAWTSMISGYVQNELIAEAISLFGEMMAHG-FSPLNGTFAVLFGAMGSVAYLDQ 139
DS +TS+ISG + AI E A G P + M
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA---------------- 183
G + D++ N+++ Y++ G+I+ + + M
Sbjct: 743 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 802
Query: 184 --------------YR---------DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYP 220
YR DK++ +S+++G+ + L + + + G+
Sbjct: 803 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 862
Query: 221 DTVTFLGVLTACAHAGLVDKGWELFNSM-------------------------------- 248
D TF +++ C G ++ ++L M
Sbjct: 863 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 922
Query: 249 --VNSYGLQPGFDHYISIINLLGRAGKVKDA----EEFVLRLPVEPNHAIWGALVGVCGL 302
++ G+ P YI +IN L R G +K A EE + PN A + +
Sbjct: 923 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 982
Query: 303 SKTDADVASRATKRLLELDPL-NAPGHVALCNIYAANDRHIELTSLRKEMRIKGVR 357
K AD A+ + +L++ + L ++ N IE LR M G++
Sbjct: 983 GK--ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 1036
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 156/364 (42%), Gaps = 64/364 (17%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ ++ING+ + G++++A +LF + R + IA++ +I GY AG + LF
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 82 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
+ D + ++S I YV++ +A A ++ M+ G SP T+ +L + +
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM--------------- 182
+ ++G +K E ++ +SL+ + KCG + + ++ +M
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 183 ------------AYR------------DKISWNSMIMGLSDHGRASEALTVYETMLEFGL 218
A R + + +NS+I G R EAL V+ M +G+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 219 YPDTVTFLGVLTA-------CAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA 271
PD TF V+ C H G +LF+ M + + +I+LL +
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPT-IGLQLFDLMQRN-KISADIAVCNVVIHLLFKC 585
Query: 272 GKVKDAEEFVLRL---PVEPNHAIWGALV-GVCGLSKTDADVASRATKRLLELDPLNAPG 327
+++DA +F L +EP+ + ++ G C L + D A R + LL++ P P
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE--AERIFE-LLKVTPF-GPN 641
Query: 328 HVAL 331
V L
Sbjct: 642 TVTL 645
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 131/296 (44%), Gaps = 22/296 (7%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKI------AWTCMISGYLSAGQVFKACDLFD 79
S+ M+N + + +++ + FD + R I A ++ G+V KA D
Sbjct: 183 SVYRMLNSLIGSDRVDLIADHFDKL-CRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHR 241
Query: 80 SMPDRD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+ +R ++ ++ G ++ I A L ++ G +P TF L
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRG 300
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWN 191
+D+ L + + E DLI ++L+ Y K G + +++FS ++ D + ++
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
S I G + A VY+ ML G+ P+ VT+ ++ G + + + ++ ++
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDA---EEFVLRLPVEPNHAIWGALVGVCGLSK 304
G++P Y S+I+ + G ++ E ++++ P+ I+G LV GLSK
Sbjct: 421 -GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD--GLSK 473
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 130/304 (42%), Gaps = 25/304 (8%)
Query: 26 SLNSMINGYVQAGQLEKAQELF-DTVPI---RNKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ +S+I+G+ + G L L+ D + + + + + ++ G G + A M
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 82 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFA-VLFGAMGSVAY 136
+ + + + S+I G+ + EA+ +F M +G P TF V+ ++ A+
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAF 547
Query: 137 LDQ-----GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDK 187
G QL + + D+ + N ++ + KC I+D+ + F+N+ D
Sbjct: 548 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
+++N+MI G R EA ++E + P+TVT ++ +D +F+
Sbjct: 608 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 667
Query: 248 MVNSYGLQPGFDHYISIINLLGRA----GKVKDAEEFVLRLPVEPNHAIWGALV-GVCGL 302
M G +P Y +++ ++ G K EE + + P+ + ++ G+C
Sbjct: 668 MAEK-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKR 725
Query: 303 SKTD 306
+ D
Sbjct: 726 GRVD 729
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 83/185 (44%), Gaps = 5/185 (2%)
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+L + + D + + +MI GY + EA +F + F P T +L +
Sbjct: 597 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNN 656
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWN 191
+D ++ + + + + + L+ ++K +I+ S+++F M + +S++
Sbjct: 657 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
+I GL GR EA ++ ++ L PD V + ++ G + + L+ M+ +
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
Query: 252 YGLQP 256
G++P
Sbjct: 777 -GVKP 780
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 133/287 (46%), Gaps = 16/287 (5%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ NS+I G+ A L + R N + ++ +I ++ G++ +A L+D M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 82 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
R D ++S+I+G+ ++ + EA +F M++ P T+ L +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA----YRDKISWNSM 193
D+G +L + + + +L+ + + E D++ +F M D ++++ +
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
+ GL ++G+ AL V+E + + PD T+ ++ AG V+ GW+LF S+ + G
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKG 531
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 297
++P Y ++++ R G ++A+ + E P+ + L+
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 12/285 (4%)
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
D+ S P + ++ ++S + ISL +M G S T+++L +
Sbjct: 71 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRS 130
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA---YR-DKISWN 191
L + +K YE D++ NSL++ + I D+ + M Y+ D ++N
Sbjct: 131 QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
++I GL H RASEA+ + + M+ G PD VT+ V+ G +D L M
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDAD 308
++PG Y +II+ L V DA + + PN + +L+ C +
Sbjct: 251 -KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR-CLCNYGRWS 308
Query: 309 VASRATKRLLE--LDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
ASR ++E ++P N AL + + + +E L EM
Sbjct: 309 DASRLLSDMIERKINP-NVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 125/292 (42%), Gaps = 36/292 (12%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D +LNS++NG+ ++ A L GQ+ + P
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSL---------------------VGQMVE----MGYQP 184
Query: 83 DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQ 142
DS + ++I G ++ +EA++L M+ G P T+ ++ + +D
Sbjct: 185 --DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 143 LHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLS 198
L + E +++ N+++ ++D+ +F+ M + + +++NS+I L
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 199 DHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGF 258
++GR S+A + M+E + P+ VTF ++ A G + + +L++ M+ + P
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDI 361
Query: 259 DHYISIIN---LLGRAGKVKDAEEFVLRLPVEPNHAIWGALV-GVCGLSKTD 306
Y S+IN + R + K E ++ PN + L+ G C + D
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 126/269 (46%), Gaps = 15/269 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D + N++I+G + + +A L D + ++ + + + +++G G + A L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 79 DSMP----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
M + + + ++I + + +A++LF EM G P T+ L + +
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 135 A-YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKIS 189
+ D R L M + I +++ ++L+ + K G++ ++ +++ M R D +
Sbjct: 305 GRWSDASRLLSDMIERKINP-NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 190 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
++S+I G H R EA ++E M+ +P+ VT+ ++ A VD+G ELF M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM- 422
Query: 250 NSYGLQPGFDHYISIINLLGRAGKVKDAE 278
+ GL Y ++I+ +A + +A+
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 139/341 (40%), Gaps = 49/341 (14%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDR- 84
+LN+M N L E P R I + + + + + K+ LFD M +R
Sbjct: 148 TLNNMTNPETAPLVLNNLLETMK--PSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERG 205
Query: 85 ---DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGR 141
D+ +T++IS QN + A+ F +M + G P N T A + A G +D
Sbjct: 206 IKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMAL 265
Query: 142 QLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA------------------ 183
L+ + D + ++L+ +Y G D I+ M
Sbjct: 266 SLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSM 325
Query: 184 ------------YRDKIS------WNSMIMGLSDHGRA---SEALTVYETMLEFGLYPDT 222
Y+D I+ W++ + +GRA +AL +Y M E GL
Sbjct: 326 GRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTV 385
Query: 223 VTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVL 282
+ + +L+ CA VD+ +E+F M N P + S+I + +G+V +AE +L
Sbjct: 386 ILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALL 445
Query: 283 RLP---VEPNHAIWGALVGVCGLSKTDADVASRATKRLLEL 320
++ EP + +++ G +K DV R ++LEL
Sbjct: 446 QMREAGFEPTLFVLTSVIQCYGKAKQVDDVV-RTFDQVLEL 485
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 14/247 (5%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D+ ++ +MI+ Y +AG ++ A L+D + + ++ +I Y +G +++
Sbjct: 244 DNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIY 303
Query: 79 DSMP----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
+ M + + + +I + + +A ++ +++ +GF+P T+A L A G
Sbjct: 304 EEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRA 363
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA---YRDKISW- 190
Y D ++ + +IL N+L+SM A +D+++ IF +M D SW
Sbjct: 364 RYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWT 423
Query: 191 -NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
+S+I + GR SEA M E G P V+ A VD F+ ++
Sbjct: 424 FSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVL 483
Query: 250 NSYGLQP 256
G+ P
Sbjct: 484 E-LGITP 489
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 127/297 (42%), Gaps = 17/297 (5%)
Query: 21 NFDDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI----AWTCMISGYLSAGQVFKACD 76
D Q + + + Q A +L D +P++ + A+T ++ Y G+ KA D
Sbjct: 172 KLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAID 231
Query: 77 LFDSM----PDRDSIAWTSMISGYVQ-NELIAEAISLFGEMMAHGFSPLNGTFAVLFGAM 131
LF+ M P + + ++ + + + + + EM + G T + + A
Sbjct: 232 LFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSAC 291
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DK 187
L + ++ YE + N+L+ ++ K G ++ + M D
Sbjct: 292 AREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADS 351
Query: 188 ISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNS 247
+++N ++ G + EA V E M + G+ P+ +T+ V+ A AG D+ +LF S
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 248 MVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCG 301
M + G P Y ++++LLG+ + + + + + PN A W ++ +CG
Sbjct: 412 MKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCG 467
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 119/297 (40%), Gaps = 20/297 (6%)
Query: 4 VFGLMDYASNALEGNLN-------NFDDQSLNSMINGYVQAGQLEKAQELFDTVPI---- 52
VFG M + + G L+ FD+ + +++++ + G L +A+E F +
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYE 313
Query: 53 RNKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISL 108
+ + ++ + AG +A + M + DS+ + +++ YV+ EA +
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 109 FGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAK 168
M G P T+ + A G D+ +L + + N+++S+ K
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 169 CGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVT 224
++ ++ +M ++ +WN+M+ + G V+ M G PD T
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 225 FLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFV 281
F +++A G +++ M + G Y +++N L R G + E +
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRA-GFNACVTTYNALLNALARKGDWRSGENVI 549
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 138/316 (43%), Gaps = 51/316 (16%)
Query: 28 NSMINGYVQAGQLEKAQELF---DTVPIR-NKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
N++ING + L A E+F + IR + + + +ISG ++G+ A L M
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 84 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
R + I +T++I +V+ + EA +L+ EM+ P T+ L L
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 195
+ + + V D++ N+L++ + K ++D ++F M Y+ D ++N++I
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKG-------------- 241
G G+ + A V+ M++ G+ PD VT+ +L + G ++K
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 242 ---------------------WELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
W LF S+ G++P YI++I+ L R G ++A++
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRK-GVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 281 VLRLPVE---PNHAIW 293
R+ + P+ I+
Sbjct: 487 CRRMKEDGFMPSERIY 502
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 133/306 (43%), Gaps = 51/306 (16%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
+L S++NG+ Q + ++A L D++ D F +P+
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSM-------------------------DGFGFVPN-- 183
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF-GAMGSVAYLDQGRQLH 144
+ + ++I+G +N + A+ +F M G T+ L G S + D R L
Sbjct: 184 VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR 243
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKI----SWNSMIMGLSDH 200
M VK + ++I +L+ + K G + ++ ++ M R + ++NS+I G H
Sbjct: 244 DM-VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
G +A +++ M+ G +PD VT+ ++T + V+ G +LF M GL
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFT 361
Query: 261 YISIINLLGRAGKVKDAEEFVLRLP---VEP--------------NHAIWGALVGVCGLS 303
Y ++I+ +AGK+ A++ R+ V P N I ALV V L
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 304 KTDADV 309
K++ DV
Sbjct: 422 KSEMDV 427
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 85 DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLH 144
D ++T +I + + ++ A++L G+MM GF P T L + L
Sbjct: 113 DLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV 172
Query: 145 GMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDH 200
+ ++++ N++++ K +++++ +F M + D +++N++I GLS+
Sbjct: 173 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 232
Query: 201 GRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH 260
GR ++A + M++ + P+ + F ++ G + + L+ M+ + P
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR-SVVPNVFT 291
Query: 261 YISIINLLGRAGKVKDAE 278
Y S+IN G + DA+
Sbjct: 292 YNSLINGFCIHGCLGDAK 309
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 138/287 (48%), Gaps = 16/287 (5%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ +S+I+ G+ A L + R N + ++ +I ++ G++ +A L+D M
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 82 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
R D ++S+I+G+ ++ + EA +F M++ P T++ L +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA----YRDKISWNSM 193
++G +L + + + +L+ + + + D++ +F M + + +++N +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
+ GL +G+ ++A+ V+E + + PD T+ ++ AG V+ GWELF ++ + G
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKG 533
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV 297
+ P Y ++I+ R G ++A+ + ++ + PN + L+
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 122/263 (46%), Gaps = 13/263 (4%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGE 111
+ + +++GY + ++ A L D M + D+ +T++I G + +EA++L +
Sbjct: 154 VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQ 213
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
M+ G P T+ + + +D L K E D+++ N+++ K
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 172 IDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
+DD+ +F+ M + D +++S+I L ++GR S+A + M+E + P+ VTF
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 228 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN---LLGRAGKVKDAEEFVLRL 284
++ A G + + +L++ M+ + P Y S+IN + R + K E ++
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 285 PVEPNHAIWGALV-GVCGLSKTD 306
PN + L+ G C + +
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVE 415
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 119/285 (41%), Gaps = 12/285 (4%)
Query: 76 DLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
D+ S P + + ++S + ISL +M G S T+++ +
Sbjct: 73 DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA---YR-DKISWN 191
L + +K YE D++ +SL++ Y I D+ + M Y+ D ++
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
++I GL H +ASEA+ + + M++ G PD VT+ V+ G +D L M
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDAD 308
++ Y +II+ L + + DA + + P+ + +L+ C +
Sbjct: 253 -KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS-CLCNYGRWS 310
Query: 309 VASRATKRLLE--LDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
ASR ++E ++P N AL + + + +E L EM
Sbjct: 311 DASRLLSDMIERKINP-NVVTFSALIDAFVKEGKLVEAEKLYDEM 354
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 19/275 (6%)
Query: 26 SLNSMINGYVQAGQLEKAQELF-------DTVPIRNKIAWTCMISGYLSAGQVFKACDLF 78
+ NS+I +Q GQ EK E++ D P + I ++ +IS Y G+ A LF
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP--DTITYSALISSYEKLGRNDSAIRLF 256
Query: 79 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
D M D +T+++ Y + + +A+ LF EM G SP T+ L +G
Sbjct: 257 DEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKA 316
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA-YR---DKISW 190
+D+ + ++ D++ N+L+++ K G +++ +FS M +R +S+
Sbjct: 317 GRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSY 376
Query: 191 NSMIMGL-SDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
N++I L SE + ++ M + P T+ ++ V+K L M
Sbjct: 377 NTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM- 435
Query: 250 NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRL 284
+ G P Y S+IN LG+A + + A E L
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 125/303 (41%), Gaps = 59/303 (19%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVPI----RNKIAWTCMISG-YLSAGQVFKACDLFDSM 81
LN+++N + G++E+ +F + + +++ +I + S V + FD M
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 82 PDRDSIA-----WTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAY 136
DS++ ++ +I GY + + +A+ L EM GF P + L A+G
Sbjct: 401 -KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 137 LDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNS 192
+ +L + + ++ + KCG++ ++ +F+ M + D ++N+
Sbjct: 460 YEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 193 MIMGLSDHGRASEA-----------------------------------LTVYETMLEFG 217
++ G+ G +EA + ++ET+ G
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSG 579
Query: 218 LYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDH----YISIINLLGRAGK 273
+ PD VT+ +L AHAG+ ++ + M + GF++ Y SI++ +G
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK-----GFEYDAITYSSILDAVGNVDH 634
Query: 274 VKD 276
KD
Sbjct: 635 EKD 637
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 125/266 (46%), Gaps = 12/266 (4%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR---NKIAWTCMISGYLSAGQVFKACDLFD 79
D+ +++ + G ++ A +LF+ + +R N +T ++ G+ G++ +A +
Sbjct: 217 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLV 276
Query: 80 SMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
M + D + +T+++SGY +A+A L +M GF P + VL A+ V
Sbjct: 277 QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWN 191
+++ ++ + E D++ +LVS + K G+ID Y + +M + ++++
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYM 396
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
+++ E L + E M + +PD + V+ G V + L+N M +
Sbjct: 397 HIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDA 277
GL PG D ++ +IN L G + +A
Sbjct: 457 -GLSPGVDTFVIMINGLASQGCLLEA 481
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 8/234 (3%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
D + NSMI G+ + + + A+ +FD + + + + +I Y A +V + L +
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 83 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
R ++ + ++I G+ + + + A LF EM++HG P T +L L+
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMI 194
+ +L + + + D + N ++ K ++D+++ +F ++ D ++N MI
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 195 MGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
G S+A ++ M + G PD T+ ++ C AG +DK EL + M
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 152/393 (38%), Gaps = 55/393 (13%)
Query: 13 NALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----DTVPIRNKIAWTCMISGYLSA 68
N + G + D + +++NG + G + A L +T + + ++ +I
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 69 GQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
G A LF M ++ + + MI G+ ++A L +M+ +P TF
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L A L + +L + D + NS++ + K DD+ +F MA
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 185 RDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWEL 244
D +++N++I R E + + + GL +T T+ ++ ++ +L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 245 FNSMVNSYGLQP----------GFDH-------------------------YISIINLLG 269
F M+ S+G+ P GF Y II+ +
Sbjct: 490 FQEMI-SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 270 RAGKVKDAEEFVLRLP---VEPNHAIWGALV-GVCGLSK-TDADVASRATKRLLELDPLN 324
+ KV +A + LP VEP+ + ++ G CG S +DA+V K +P N
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDN 607
Query: 325 APGHVAL--CNIYAANDRHIELTSLRKEMRIKG 355
+ + + C D+ IEL S EMR G
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELIS---EMRSNG 637
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 129/310 (41%), Gaps = 32/310 (10%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMP- 82
N +I +V+ + + A L+ + IR N ++ +I + ++ + F +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 83 ---DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGF---------------SPLNGTF 124
D + + +++ G + I+EA++LFG M+ GF +P+ TF
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
L + + + L V D++ ++V+ K G+ + + S M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 185 R----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
D + ++++I L G S+A ++ MLE G+ P+ T+ ++ G
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALV 297
L M+ + P + ++I+ + GK+ +AE+ +L + P+ + +++
Sbjct: 350 AQRLLRDMIER-EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 298 -GVCGLSKTD 306
G C ++ D
Sbjct: 409 YGFCKHNRFD 418
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 128/287 (44%), Gaps = 18/287 (6%)
Query: 13 NALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELFDTVP---IRNKI-AWTCMISGYLSA 68
N +E L + N ++NG V A ++ A+ +F+ + I+ I + MI GY A
Sbjct: 216 NGIEPTLYTY-----NFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 69 GQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTF 124
GQ KA + M R D I + +MI + ++L+ EM G F
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 125 AVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAY 184
+++ G + L++G + ++ + ++ + L+ YAK G ++D+ R+ M
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 185 R----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDK 240
D ++++ ++ GL +GR EAL + T GL +++ + ++ AG VD+
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 241 GWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 287
LF M + + Y ++I+ + KV +A R+ E
Sbjct: 451 AERLFEEMSEKGCTRDSY-CYNALIDAFTKHRKVDEAIALFKRMEEE 496
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 140/321 (43%), Gaps = 29/321 (9%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D + N+MI GY +AGQ +KA E + R +KI + MI + L+
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 79 DSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVL---FGAM 131
M ++ A++ +I G + + E ++F M+ G P + VL +
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 132 GSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDKISWN 191
GSV D R LH M + ++ D++ + +V+ K G ++++ F + D ++ N
Sbjct: 376 GSVE--DAIRLLHRM-IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRF-DGLAIN 431
Query: 192 SM-----IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFN 246
SM I GL GR EA ++E M E G D+ + ++ A VD+ LF
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 247 SMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGAL-VGVCGL 302
M G Y +++ + + + ++A + ++ + P A + AL G+C
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLS 551
Query: 303 SKTDADVASRATKRLLELDPL 323
K +RA K L EL P+
Sbjct: 552 GKV-----ARACKILDELAPM 567
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 123/283 (43%), Gaps = 10/283 (3%)
Query: 88 AWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQ 147
A ++I + + ++ E + ++ +M +G P T+ L + S ++D ++ +
Sbjct: 189 AANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM 248
Query: 148 VKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRA 203
+ D++ N+++ Y K G+ + +M R DKI++ +MI
Sbjct: 249 ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDF 308
Query: 204 SEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYIS 263
+ +Y+ M E G+ F V+ G +++G+ +F +M+ G +P Y
Sbjct: 309 GSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRK-GSKPNVAIYTV 367
Query: 264 IINLLGRAGKVKDAEEFVLRLPVE---PNHAIWGALV-GVCGLSKTDADVASRATKRLLE 319
+I+ ++G V+DA + R+ E P+ + +V G+C + + + T R
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 320 LDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGVRKAPGC 362
L +N+ + +L + R E L +EM KG + C
Sbjct: 428 L-AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 469
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 133/287 (46%), Gaps = 16/287 (5%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ ++ING+ + G++++A +LF + R + IA++ +I GY AG + LF
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 82 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
+ D + ++S I YV++ +A A ++ M+ G SP T+ +L + +
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSM 193
+ ++G +K E ++ +SL+ + KCG + + ++ +M D + + +
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYG 253
+ GLS G A+ ML + + V F ++ D+ ++F M YG
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM-GIYG 526
Query: 254 LQPGFDHYISIINLLGRAGKVKDAEEFVLR---LPVEPNHAIWGALV 297
++P + +++ + G++++A R + +EP+ + L+
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 131/296 (44%), Gaps = 22/296 (7%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKI------AWTCMISGYLSAGQVFKACDLFD 79
S+ M+N + + +++ + FD + R I A ++ G+V KA D
Sbjct: 183 SVYRMLNSLIGSDRVDLIADHFDKL-CRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHR 241
Query: 80 SMPDRD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVA 135
+ +R ++ ++ G ++ I A L ++ G +P TF L
Sbjct: 242 LVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRG 300
Query: 136 YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWN 191
+D+ L + + E DLI ++L+ Y K G + +++FS ++ D + ++
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 192 SMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNS 251
S I G + A VY+ ML G+ P+ VT+ ++ G + + + ++ ++
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 252 YGLQPGFDHYISIINLLGRAGKVKDA---EEFVLRLPVEPNHAIWGALVGVCGLSK 304
G++P Y S+I+ + G ++ E ++++ P+ I+G LV GLSK
Sbjct: 421 -GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD--GLSK 473
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 109/256 (42%), Gaps = 13/256 (5%)
Query: 60 CMISGYLSAGQVFKACDLFDSMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSP 119
C ++ + A +VF+ ++ PD + +T+++ + + EA+ LF M G P
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVAT--FTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 120 LNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIF 179
+ L A G QL + + D+ + N ++ + KC I+D+ + F
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 180 SNM----AYRDKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHA 235
+N+ D +++N+MI G R EA ++E + P+TVT ++
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 236 GLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRA----GKVKDAEEFVLRLPVEPNHA 291
+D +F+ M G +P Y +++ ++ G K EE + + P+
Sbjct: 685 NDMDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIV 742
Query: 292 IWGALV-GVCGLSKTD 306
+ ++ G+C + D
Sbjct: 743 SYSIIIDGLCKRGRVD 758
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 106/241 (43%), Gaps = 15/241 (6%)
Query: 29 SMINGYVQAGQLEKAQELFDTVPIRNKIA-----WTCMISGYLSAGQVFKACDLFDSMPD 83
++I+ + + + +LFD + RNKI+ +I ++ A F+++ +
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQ-RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 84 ----RDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
D + + +MI GY + EA +F + F P T +L + +D
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 195
++ + + + + + L+ ++K +I+ S+++F M + +S++ +I
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
GL GR EA ++ ++ L PD V + ++ G + + L+ M+ + G++
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN-GVK 808
Query: 256 P 256
P
Sbjct: 809 P 809
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 137/323 (42%), Gaps = 53/323 (16%)
Query: 27 LNSMINGYVQAGQLEKAQELFDTVP----IRNKIAWTCMISGYLSAGQVFKACDLFDSMP 82
+SM++ + ++G L+KA F++V I + + +T +I GY G + A +L + M
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 83 DR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD 138
+ D + + +++ G + +++ EA LF EM P + T +L + L
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 139 QGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRD----KISW---- 190
+L + D++ N+L+ + K G+ID + I+++M ++ IS+
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 191 -------------------------------NSMIMGLSDHGRASEALTVYETMLEFGLY 219
NSMI G G AS+ + E M+ G
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 220 PDTVTFLGVLTACAHAGLVDKGWELFNSMVNSY-GLQPGFDHYISIINLLGRAGKVKDAE 278
PD +++ ++ + K + L M GL P Y SI++ R ++K+A
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA- 676
Query: 279 EFVLRLPVE----PNHAIWGALV 297
E VLR +E P+ + + ++
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMI 699
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 143/338 (42%), Gaps = 55/338 (16%)
Query: 2 YSVFGLMDYA---SNALEGNLNNFDDQSLNSMINGYVQAGQLEKAQELF----------- 47
YS GLM+ A NA+ G + + N++ING + G+ E+A+E+F
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 48 ------------------------------DTVPIRNKIAWTCMISGYLSAGQVFKACDL 77
D VP + + ++ M+S + +G + KA
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP--DLVCFSSMMSLFTRSGNLDKALMY 397
Query: 78 FDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
F+S+ + D++ +T +I GY + +I+ A++L EM+ G + T+ + +
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKIS 189
L + +L + D L+ + K G + ++ +F M + D ++
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517
Query: 190 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
+N+++ G G A ++ M+ + P +++ ++ A G + + + +++ M+
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 250 NSYGLQPGFDHYISIINLLGRAGKVKDAEEFVLRLPVE 287
S ++P S+I R+G D E F+ ++ E
Sbjct: 578 -SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 138/319 (43%), Gaps = 56/319 (17%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPDRD 85
SL++MI+ V++G+L AQ + R+ ++ +++ S F C DS+ D
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVN---SLDSTFSNCGSNDSVFDL- 170
Query: 86 SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLD------- 138
+I YVQ + EA F + + GF+ L G++ + +++
Sbjct: 171 ------LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 139 -----------------------------QGRQLHGMQVKTIYEYDLILENSLVSMYAKC 169
G L +Q K +Y D++ N+L+S Y+
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP-DIVTYNTLISAYSSK 283
Query: 170 GEIDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
G +++++ + + M + ++N++I GL HG+ A V+ ML GL PD+ T+
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 226 LGVLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF---VL 282
+L G V + ++F+ M S + P + S+++L R+G + A + V
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 283 RLPVEPNHAIWGALV-GVC 300
+ P++ I+ L+ G C
Sbjct: 403 EAGLIPDNVIYTILIQGYC 421
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 12/234 (5%)
Query: 28 NSMINGYVQAGQLEKA----QELFDTVPIRNKIAWTCMISGYLSAGQVFKACDLFDSMPD 83
N++I V+ G +E A QE+ + N M++ G++ K + +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 84 R----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
+ D + + ++IS Y L+ EA L M GFSP T+ + + ++
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYRDK----ISWNSMIM 195
+++ +++ D SL+ K G++ ++ ++FS+M RD + ++SM+
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
+ G +AL + ++ E GL PD V + ++ G++ L N M+
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 22 FDDQSLNSMINGYVQAGQLEKAQELF-DTVP---IRNKIAWTCMISGYLSAGQVFKACDL 77
D + N++++G+ + G ++ A+E++ D V + I+++ +++ S G + +A +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 78 FDSMPDRD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLF----- 128
+D M ++ + SMI GY ++ ++ S +M++ GF P ++ L
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 129 -----GAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA 183
A G V +++ G V ++ Y NS++ + + ++ ++ + M
Sbjct: 633 EENMSKAFGLVKKMEEE---QGGLVPDVFTY-----NSILHGFCRQNQMKEAEVVLRKMI 684
Query: 184 YR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPD 221
R D+ ++ MI G +EA +++ ML+ G PD
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/250 (18%), Positives = 103/250 (41%), Gaps = 19/250 (7%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVP---IR-NKIAWTCMISGYLSAGQVFKACDLF 78
D +L +I+G+ + G L+ A ELF + IR + + + ++ G+ G + A +++
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 79 DSMPDRD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
M ++ I+++ +++ +AEA ++ EM++ P +
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 135 AYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR------DKI 188
G + + D I N+L+ + + + ++ + M D
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 189 SWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSM 248
++NS++ G + EA V M+E G+ PD T+ ++ + + + + + M
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Query: 249 VNSYGLQPGF 258
LQ GF
Sbjct: 719 -----LQRGF 723
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 120/263 (45%), Gaps = 13/263 (4%)
Query: 56 IAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLFGE 111
+ +++G+ ++ A L D M + D++ +T++I G + +EA++L
Sbjct: 149 VTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDR 208
Query: 112 MMAHGFSPLNGTFAVLFGAMGSVAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGE 171
M+ G P T+ + + D L E ++++ ++++ K
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 172 IDDSYRIFSNMAYR----DKISWNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLG 227
DD+ +F+ M + + I+++S+I L ++GR S+A + M+E + P+ VTF
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 228 VLTACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIIN---LLGRAGKVKDAEEFVLRL 284
++ A G + K +L+ M+ + P Y S+IN +L R G+ K E ++R
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKR-SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK 387
Query: 285 PVEPNHAIWGALV-GVCGLSKTD 306
PN + L+ G C + D
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVD 410
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 134/295 (45%), Gaps = 19/295 (6%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLF 78
D + ++I+G + +A L D + R + + + +++G G A +L
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 79 DSMP----DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSV 134
+ M + + + ++++I + +A++LF EM G P T++ L + +
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 135 A-YLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKIS 189
+ D R L M + I +L+ ++L+ + K G++ + +++ M R + +
Sbjct: 302 GRWSDASRLLSDMIERKINP-NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360
Query: 190 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMV 249
++S+I G R EA + E M+ P+ VT+ ++ A VDKG ELF M
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM- 419
Query: 250 NSYGLQPGFDHYISIINLLGRAGKVKDAE---EFVLRLPVEPNHAIWGALV-GVC 300
+ GL Y ++I+ +A +A+ + ++ + V PN + L+ G+C
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 12/281 (4%)
Query: 80 SMPDRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
S P I ++ ++S + IS +M G S T+ +L + L
Sbjct: 72 SRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSL 131
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA---YR-DKISWNSMIM 195
L G +K YE D++ NSL++ + I D+ + M Y+ D +++ ++I
Sbjct: 132 ALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIH 191
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVNSYGLQ 255
GL H +ASEA+ + + M++ G PD VT+ V+ G D L N M + ++
Sbjct: 192 GLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM-EAAKIE 250
Query: 256 PGFDHYISIINLLGRAGKVKDAEEFVLRLP---VEPNHAIWGALVGVCGLSKTDADVASR 312
Y ++I+ L + DA + V PN + +L+ C + ASR
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS-CLCNYGRWSDASR 309
Query: 313 ATKRLLE--LDPLNAPGHVALCNIYAANDRHIELTSLRKEM 351
++E ++P N AL + + + ++ L +EM
Sbjct: 310 LLSDMIERKINP-NLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 101/223 (45%), Gaps = 12/223 (5%)
Query: 26 SLNSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSM 81
+ +S+I+ G+ A L + R N + ++ +I ++ G++ KA L++ M
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Query: 82 PDR----DSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYL 137
R + ++S+I+G+ + + EA + M+ P T+ L +
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 138 DQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMA----YRDKISWNSM 193
D+G +L + + + +L+ + + + D++ +F M + + +++N +
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Query: 194 IMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAG 236
+ GL +G+ ++A+ V+E + + PD T+ ++ AG
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 157/380 (41%), Gaps = 53/380 (13%)
Query: 28 NSMINGYVQAGQLEKAQELFDTVPIR----NKIAWTCMISGYLSAGQVFKACDLFDSMP- 82
N++I+ +++AG L KA E+ D + + + +I GY GQ A L M
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 83 ---DRDSIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGSVAYLDQ 139
+ + ++TS+I + + A+ GEM+ SP G L + +
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 140 GRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISWNSMIM 195
+L + + D N+L+ + G++D+++RI + R D++S+N++I
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 196 GLSDHGRASEALTVYETMLEFGLYPDTVTFL-------------------------GVLT 230
G + EA + M++ GL PD T+ G+L
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608
Query: 231 ----------ACAHAGLVDKGWELFNSMVNSYGLQPGFDHYISIINLLGRAGKVKDAEEF 280
C A ++G E F+ M+ S +QP Y +I R+G++ A E
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 281 VLRLP---VEPNHAIWGALV-GVCGLSKTDADVASRATKRLLELDPLNAPGHVALCNIYA 336
+ + PN A + +L+ G+ +S+ + R+ L+P N + AL + Y
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYG 726
Query: 337 ANDRHIELTSLRKEMRIKGV 356
+ +++ L +EM K V
Sbjct: 727 KLGQMVKVECLLREMHSKNV 746
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 149/350 (42%), Gaps = 49/350 (14%)
Query: 54 NKIAWTCMISGYLSAGQVFKACDLFDSMPDR----DSIAWTSMISGYVQNELIAEAISLF 109
N I + +I ++ AG + KA ++ D M + S + ++I GY +N A L
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 110 GEMMAHGFSPLNGTFAVLF----------------GAM---------GSVAYLDQGRQLH 144
EM++ GF+ G+F + G M G + L G H
Sbjct: 424 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 483
Query: 145 GMQVKTI----------YEYDLILENSLVSMYAKCGEIDDSYRIFSNMAYR----DKISW 190
G K + + D N+L+ + G++D+++RI + R D++S+
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 191 NSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTFLGVLTACAHAGLVDKGWELFNSMVN 250
N++I G + EA + M++ GL PD T+ ++ + V++ + ++
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 251 SYGLQPGFDHYISIINLLGRAGKVKDAEEF---VLRLPVEPNHAIWGALV-GVCGLSKTD 306
+ G+ P Y +I+ +A + ++ +EF ++ V+PN ++ L+ C +
Sbjct: 604 N-GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 307 ADVASRATKRLLELDPLNAPGHVALCNIYAANDRHIELTSLRKEMRIKGV 356
+ R + + P N+ + +L + R E L +EMR++G+
Sbjct: 663 MALELREDMKHKGISP-NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGL 711
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 23 DDQSLNSMINGYVQAGQLEKAQELFDTVPIRNKI-----AWTCMISGYLSAGQVFKACDL 77
D+ + + +I G ++E+A + +D RN + ++ MI G A + + +
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCK-RNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 78 FDSMPDRD----SIAWTSMISGYVQNELIAEAISLFGEMMAHGFSPLNGTFAVLFGAMGS 133
FD M ++ ++ + +I Y ++ ++ A+ L +M G SP + T+ L M
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 134 VAYLDQGRQLHGMQVKTIYEYDLILENSLVSMYAKCGEIDDSYRIFSNM----AYRDKIS 189
++ +++ + L E ++ +L+ Y K G++ + M + +KI+
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 190 WNSMIMGLSDHGRASEALTVYETMLEFGLYPDTVTF 225
+ MI G + G +EA + M E G+ PD++T+
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788