Miyakogusa Predicted Gene

Lj0g3v0322529.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0322529.1 Non Chatacterized Hit- tr|G7LEE9|G7LEE9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,45.52,9e-19,FAMILY NOT NAMED,NULL; TRAF
domain-like,TRAF-like; meprin and TRAF homology,MATH;
coiled-coil,NULL; ,CUFF.21884.1
         (317 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ...   117   1e-26
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ...   117   1e-26
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ...   117   1e-26
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ...   114   1e-25
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ...   114   1e-25
AT3G58210.1 | Symbols:  | TRAF-like family protein | chr3:215626...    80   2e-15
AT3G58270.2 | Symbols:  | Arabidopsis phospholipase-like protein...    77   2e-14
AT3G58270.1 | Symbols:  | Arabidopsis phospholipase-like protein...    77   2e-14
AT3G58340.1 | Symbols:  | TRAF-like family protein | chr3:215890...    75   4e-14
AT3G44800.1 | Symbols:  | Meprin and TRAF (MATH) homology domain...    74   2e-13
AT3G58290.1 | Symbols:  | TRAF-like superfamily protein | chr3:2...    73   2e-13
AT3G58250.1 | Symbols:  | TRAF-like family protein | chr3:215707...    73   3e-13
AT3G58360.1 | Symbols:  | TRAF-like family protein | chr3:215935...    72   7e-13
AT3G58260.1 | Symbols:  | TRAF-like family protein | chr3:215737...    68   7e-12
AT3G27040.1 | Symbols:  | Meprin and TRAF (MATH) homology domain...    68   1e-11
AT3G44790.1 | Symbols:  | TRAF-like family protein | chr3:163287...    67   1e-11
AT1G04300.1 | Symbols:  | TRAF-like superfamily protein | chr1:1...    65   4e-11
AT2G25320.1 | Symbols:  | TRAF-like family protein | chr2:107819...    64   1e-10
AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 | chr3:2...    62   4e-10
AT3G17380.1 | Symbols:  | TRAF-like family protein | chr3:595024...    62   6e-10
AT3G58410.1 | Symbols:  | TRAF-like family protein | chr3:216048...    62   8e-10
AT2G25330.1 | Symbols:  | TRAF-like family protein | chr2:107889...    61   9e-10
AT1G04300.3 | Symbols:  | TRAF-like superfamily protein | chr1:1...    61   1e-09
AT3G58440.1 | Symbols:  | TRAF-like superfamily protein | chr3:2...    60   1e-09
AT5G52330.1 | Symbols:  | TRAF-like superfamily protein | chr5:2...    60   1e-09
AT5G43560.2 | Symbols:  | TRAF-like superfamily protein | chr5:1...    60   2e-09
AT5G43560.1 | Symbols:  | TRAF-like superfamily protein | chr5:1...    60   2e-09
AT2G01790.1 | Symbols:  | TRAF-like family protein | chr2:341322...    60   2e-09
AT2G05420.1 | Symbols:  | TRAF-like family protein | chr2:198390...    57   1e-08
AT2G05410.1 | Symbols:  | TRAF-like family protein | chr2:197749...    57   2e-08
AT1G04300.4 | Symbols:  | TRAF-like superfamily protein | chr1:1...    56   4e-08
AT1G31390.1 | Symbols:  | TRAF-like family protein | chr1:112431...    55   5e-08
AT1G31400.1 | Symbols:  | TRAF-like family protein | chr1:112452...    54   1e-07
AT3G58220.2 | Symbols:  | TRAF-like family protein | chr3:215646...    54   2e-07
AT4G09780.1 | Symbols:  | TRAF-like family protein | chr4:615953...    54   2e-07
AT3G58240.1 | Symbols:  | TRAF-like superfamily protein | chr3:2...    53   3e-07
AT3G58220.1 | Symbols:  | TRAF-like family protein | chr3:215651...    53   3e-07
AT3G58200.1 | Symbols:  | TRAF-like family protein | chr3:215600...    52   7e-07
AT3G58290.3 | Symbols:  | TRAF-like superfamily protein | chr3:2...    52   7e-07
AT2G42470.1 | Symbols:  | TRAF-like family protein | chr2:176798...    50   2e-06
AT5G26320.1 | Symbols:  | TRAF-like family protein | chr5:923831...    50   3e-06
AT4G09770.2 | Symbols:  | TRAF-like family protein | chr4:615453...    48   7e-06
AT4G09770.1 | Symbols:  | TRAF-like family protein | chr4:615453...    48   7e-06

>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
           chr5:2019545-2027834 REVERSE LENGTH=1116
          Length = 1116

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 10/133 (7%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVD--- 67
           KFTW I NFS+ ++R         YS  F + G+ W I I+P G NVD+  +YLDV    
Sbjct: 56  KFTWTIPNFSRQNTRKH-------YSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAA 108

Query: 68  SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
           SLP GW  +A F+LA++NQ + + T+R E +H F      +G++ F+  SEL DP  G++
Sbjct: 109 SLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYL 168

Query: 128 VNDICVIEAEITV 140
           VND  ++EAE+ V
Sbjct: 169 VNDTVLVEAEVAV 181


>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
           chr5:2019545-2027834 REVERSE LENGTH=1115
          Length = 1115

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 10/133 (7%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVD--- 67
           KFTW I NFS+ ++R         YS  F + G+ W I I+P G NVD+  +YLDV    
Sbjct: 55  KFTWTIPNFSRQNTRKH-------YSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAA 107

Query: 68  SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
           SLP GW  +A F+LA++NQ + + T+R E +H F      +G++ F+  SEL DP  G++
Sbjct: 108 SLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYL 167

Query: 128 VNDICVIEAEITV 140
           VND  ++EAE+ V
Sbjct: 168 VNDTVLVEAEVAV 180


>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
           chr5:2020682-2027834 REVERSE LENGTH=985
          Length = 985

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 10/133 (7%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVD--- 67
           KFTW I NFS+ ++R         YS  F + G+ W I I+P G NVD+  +YLDV    
Sbjct: 56  KFTWTIPNFSRQNTRKH-------YSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAA 108

Query: 68  SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
           SLP GW  +A F+LA++NQ + + T+R E +H F      +G++ F+  SEL DP  G++
Sbjct: 109 SLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYL 168

Query: 128 VNDICVIEAEITV 140
           VND  ++EAE+ V
Sbjct: 169 VNDTVLVEAEVAV 181


>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
           chr3:3761758-3770290 REVERSE LENGTH=1115
          Length = 1115

 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 10/133 (7%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVD--- 67
           KFTW I  F++L++R         YS  F + G+ W I I+P G NVD+  +YLDV    
Sbjct: 55  KFTWTIPMFTRLNTRKH-------YSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAA 107

Query: 68  SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
           +LP GW  ++ F+LA++NQ N++ +IR E +H F      +G++ F+  SEL +P  G++
Sbjct: 108 NLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYL 167

Query: 128 VNDICVIEAEITV 140
           VND  +IEAE+ V
Sbjct: 168 VNDTVLIEAEVAV 180


>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
           chr3:3761758-3770290 REVERSE LENGTH=1114
          Length = 1114

 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 10/133 (7%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVD--- 67
           KFTW I  F++L++R         YS  F + G+ W I I+P G NVD+  +YLDV    
Sbjct: 54  KFTWTIPMFTRLNTRKH-------YSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAA 106

Query: 68  SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
           +LP GW  ++ F+LA++NQ N++ +IR E +H F      +G++ F+  SEL +P  G++
Sbjct: 107 NLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYL 166

Query: 128 VNDICVIEAEITV 140
           VND  +IEAE+ V
Sbjct: 167 VNDTVLIEAEVAV 179


>AT3G58210.1 | Symbols:  | TRAF-like family protein |
           chr3:21562645-21564067 REVERSE LENGTH=330
          Length = 330

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 71/136 (52%), Gaps = 12/136 (8%)

Query: 10  DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV--DYFKIYLDVD 67
           +KFTW I+NFS   SR       +  S  F + G  W + +YP G N   D+  ++L+V 
Sbjct: 7   NKFTWVIQNFSSSQSR-------VVPSNQFVIGGCKWRLLVYPEGFNKSGDHLSLFLEVA 59

Query: 68  ---SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIG 124
              SLP GW   A + L ++NQ + K++ R EA   F +    +G S  I  ++L    G
Sbjct: 60  DPRSLPPGWSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDG 119

Query: 125 GFIVNDICVIEAEITV 140
           GF+VND   I AE+ V
Sbjct: 120 GFLVNDELKIVAEVNV 135


>AT3G58270.2 | Symbols:  | Arabidopsis phospholipase-like protein
           (PEARLI 4) with TRAF-like domain |
           chr3:21576033-21577655 REVERSE LENGTH=343
          Length = 343

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 10/134 (7%)

Query: 10  DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVDS- 68
           +KFTW I+NFS   SR +       YS  FF+ G  W +  +P G  V+   +YL V   
Sbjct: 7   NKFTWVIKNFSSQQSRKN-------YSDEFFVDGCKWRLLAFPKGNGVEKLSLYLAVAGS 59

Query: 69  --LPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGF 126
             LP GW   A F  +++NQ + +++   E K+ F  +   +G++  ++  +L D  GGF
Sbjct: 60  EFLPDGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGF 119

Query: 127 IVNDICVIEAEITV 140
           +VN    I  +++V
Sbjct: 120 LVNGELKIVVDVSV 133


>AT3G58270.1 | Symbols:  | Arabidopsis phospholipase-like protein
           (PEARLI 4) with TRAF-like domain |
           chr3:21576033-21577655 REVERSE LENGTH=343
          Length = 343

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 10/134 (7%)

Query: 10  DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVDS- 68
           +KFTW I+NFS   SR +       YS  FF+ G  W +  +P G  V+   +YL V   
Sbjct: 7   NKFTWVIKNFSSQQSRKN-------YSDEFFVDGCKWRLLAFPKGNGVEKLSLYLAVAGS 59

Query: 69  --LPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGF 126
             LP GW   A F  +++NQ + +++   E K+ F  +   +G++  ++  +L D  GGF
Sbjct: 60  EFLPDGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGF 119

Query: 127 IVNDICVIEAEITV 140
           +VN    I  +++V
Sbjct: 120 LVNGELKIVVDVSV 133


>AT3G58340.1 | Symbols:  | TRAF-like family protein |
           chr3:21589071-21590401 REVERSE LENGTH=325
          Length = 325

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 10/131 (7%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDV---D 67
           KF W+I+NFS L+S          +S    +    W +  +P G   DY  +YL+V    
Sbjct: 8   KFCWEIKNFSSLNSERC-------HSVPVVIGDCKWRLVAFPKGYKADYLSLYLEVADFK 60

Query: 68  SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
           SLP GW  +  F   ++NQ + +++++ E +  F +    +G+   +  +EL    GGF+
Sbjct: 61  SLPSGWRRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFL 120

Query: 128 VNDICVIEAEI 138
           VN   +I AE+
Sbjct: 121 VNGQVMIVAEV 131


>AT3G44800.1 | Symbols:  | Meprin and TRAF (MATH) homology
           domain-containing protein | chr3:16343333-16346027
           FORWARD LENGTH=564
          Length = 564

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 11/135 (8%)

Query: 10  DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG-ENVDYFKIYLD--- 65
           +KFTW I+NFS L S       +   S  F + G  W +  YP G +N  Y  +YLD   
Sbjct: 4   EKFTWVIKNFSSLQS-------EYIKSDIFVIGGCKWCLLAYPNGKQNASYLSLYLDGPT 56

Query: 66  VDSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
           + +LP G      F L ++NQ +  ++ R E K  F +   L GY + +  ++L    GG
Sbjct: 57  LKTLPCGCRRRIRFRLTVVNQLSENLSRRGEGKRWFDKKLPLCGYEEVLLLTKLNAKHGG 116

Query: 126 FIVNDICVIEAEITV 140
           F+VN+   I AE+ V
Sbjct: 117 FLVNNEVKIVAEVDV 131


>AT3G58290.1 | Symbols:  | TRAF-like superfamily protein |
           chr3:21580572-21581861 REVERSE LENGTH=282
          Length = 282

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 36/277 (12%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYF---------- 60
           KF W I+NFS      SL  +  + S    +    W +  YP G N D+           
Sbjct: 11  KFVWVIKNFS------SLQLQDCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGDHL 64

Query: 61  KIYLDVD--SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSE 118
            +YL+VD  SLP GW ++  F   ++NQ +   +++ E +  F +    +G+ + I+ ++
Sbjct: 65  SLYLEVDFESLPCGWRQYTQFRFTVVNQISEHSSVKREGRKWFDKKAPEWGWEEMISLTK 124

Query: 119 LRDPIGGFIVNDICVIEAEITVCNSEEHDQSQLNNSLPE----QISSSSQRDLVDFKGLV 174
           L D   GF+VN   +I AE+    +    Q        E       SSS+ D  D   +V
Sbjct: 125 LNDINSGFVVNGELMIVAEVETFEAVSTSQVAAVRDDSEWTLLGYYSSSEEDKDDVTVVV 184

Query: 175 K---IEKAFVPLLEEVCSWHPSLVE--FLKKRSRTHMFNEWAFTALGRVLHFLK--NKKV 227
           K   +  + V  ++E+   HP L     LK ++  +++       +G +L  +K  +K  
Sbjct: 185 KGFHVLDSQVNQVKEIFEKHPDLATNLVLKNQNLKNVY-------MGFLLDLIKTLSKLP 237

Query: 228 KDMNDDACNHLQILWEELEAFRFDLSWLKPHVQFALD 264
           K++ ++  N       +L    F L WL+  +  AL+
Sbjct: 238 KELTEEDLNFADSTLSDLTNAGFMLDWLRLKLNRALE 274


>AT3G58250.1 | Symbols:  | TRAF-like family protein |
           chr3:21570745-21572143 REVERSE LENGTH=317
          Length = 317

 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 12/140 (8%)

Query: 6   EARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV--DYFKIY 63
           +A   KF+W I+NFS L S          YS  F + G  W +  +P G +   D+  +Y
Sbjct: 5   QADKKKFSWVIKNFSSLQSEK-------IYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLY 57

Query: 64  LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
           LDV   +SLP GW   A F+  ++N    K + R E  H F E    +G++  +   EL+
Sbjct: 58  LDVAESESLPCGWRRHAQFSFTIVNHIPEKCSQRKETIHWFCEKVSDWGFTNLVPLIELK 117

Query: 121 DPIGGFIVNDICVIEAEITV 140
               GF+V     I  EI V
Sbjct: 118 AEDSGFLVKGELKIVVEIEV 137


>AT3G58360.1 | Symbols:  | TRAF-like family protein |
           chr3:21593505-21594866 REVERSE LENGTH=298
          Length = 298

 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 10/133 (7%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDV---D 67
           K TW IENFS L S+         YS  F + G  W   +YP G NVDY  +YL+V   +
Sbjct: 8   KITWAIENFSSLHSKK-------IYSDPFIVGGCKWRFLVYPKGNNVDYLFLYLEVADYE 60

Query: 68  SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
           SL   W   A + L ++NQ + K + + E +  F      +G       +E+     GF+
Sbjct: 61  SLSPEWRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKDSGFL 120

Query: 128 VNDICVIEAEITV 140
           VN    I AEI V
Sbjct: 121 VNGELKIVAEIEV 133


>AT3G58260.1 | Symbols:  | TRAF-like family protein |
           chr3:21573754-21575114 REVERSE LENGTH=321
          Length = 321

 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 47/313 (15%)

Query: 10  DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYF---KIYLDV 66
           + FTW I+N S L             S+ F + G  W +  YP   + D +    +YL V
Sbjct: 7   NTFTWVIKNLSTLQGLE-------VRSKIFVVGGCKWRLIAYPEVNDADGYLSLSVYLGV 59

Query: 67  ----DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDP 122
               +SLP GW   A F+L ++NQ +  ++   E +  F E    +G+   +   ++ D 
Sbjct: 60  PDCCESLPSGWKRHAKFSLTIVNQLSEGLSQVQETQAWFDENAPGWGFPPMLNLKDVSDK 119

Query: 123 IGGFIVNDICVIEAEITVCNSEEHDQSQLNNSL--PEQISSSSQRDLVDFKGLVKIEKAF 180
            GGF+VND  ++   + V         ++  SL  PE    S   D+  FK L    K+ 
Sbjct: 120 YGGFLVNDEVMVAVAVDVI--------EVVGSLDAPEM---SESMDIKGFKVLPSQVKSV 168

Query: 181 VPLLEEVCSWHPSLVE--FLKKRS-RTHMFNEWAFTALGRVLHFLKNKKVKDMNDDACNH 237
             L E     HP +     +K +S +T   N      L   LH    +   ++++D  + 
Sbjct: 169 NRLFES----HPDIASKFSIKNQSLKTAYMN--VLLCLAETLH----QSPMEISEDDLSD 218

Query: 238 LQILWEELEAFRFDLSWLKPHVQFALDIKSYHERAVH-------VKKLRKNVDILEANLK 290
            +     +++  F L WL+  +    + K      +        +K LR+    LEA LK
Sbjct: 219 AKTTLAYMKSVGFKLDWLEKKLDELFEKKKEEADKIRMQNIEEELKDLRQKCSSLEALLK 278

Query: 291 IARRELVKAEEGF 303
             +  ++ A+  F
Sbjct: 279 KEKTGVLAAKAPF 291


>AT3G27040.1 | Symbols:  | Meprin and TRAF (MATH) homology
           domain-containing protein | chr3:9974912-9977927 REVERSE
           LENGTH=358
          Length = 358

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 11/134 (8%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIYLDV--- 66
           KFTW I+N++ L S +        YS  F      W +  +P G N+ DYF +Y+ V   
Sbjct: 96  KFTWVIKNYNSLGSGS-------VYSDTFKAGRCKWRLLAFPKGNNIYDYFFLYICVPNS 148

Query: 67  DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGF 126
           +SLP GW   A  +  ++NQ    ++ + EA + F E    +G+      SE++    GF
Sbjct: 149 ESLPSGWRRRAKVSFTMVNQIPGGLSQQREAVYWFDEKDTTHGFESMFLLSEIQSSDKGF 208

Query: 127 IVNDICVIEAEITV 140
           +VN    I AE+ V
Sbjct: 209 LVNGEVKIVAEVDV 222


>AT3G44790.1 | Symbols:  | TRAF-like family protein |
           chr3:16328792-16330265 FORWARD LENGTH=324
          Length = 324

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 13/134 (9%)

Query: 10  DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDV--- 66
           +KFTW I+NFS L S       K   S  F + G  W++  Y   +N +Y  ++L V   
Sbjct: 4   EKFTWVIKNFSSLQS-------KYINSDKFVIGGCKWFLKGY---QNANYLSLFLMVATS 53

Query: 67  DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGF 126
            +LP GW  +  F L ++NQ + +++ + E +  F +   L G    I+ ++L    GGF
Sbjct: 54  KTLPCGWRRYTRFRLTVVNQLSDELSQQRETETWFDQNVVLSGNRHMISLTKLNAKKGGF 113

Query: 127 IVNDICVIEAEITV 140
           +VN+   I  E+ V
Sbjct: 114 LVNNEVKIVVEVDV 127


>AT1G04300.1 | Symbols:  | TRAF-like superfamily protein |
           chr1:1148818-1153895 REVERSE LENGTH=1074
          Length = 1074

 Score = 65.5 bits (158), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 38/242 (15%)

Query: 5   PEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIY 63
           P     ++TWKI  FS++  R          S  F   G+ W+I IYP G +V ++  ++
Sbjct: 63  PSELYGQYTWKIPKFSEITKREH-------RSNVFEAGGYKWYILIYPQGCDVCNHLSLF 115

Query: 64  LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
           L V   D L  GW +FA FT+++++Q   K     +  H F +  + +G+ KF+   +L+
Sbjct: 116 LCVANYDKLLPGWSQFAQFTISVLSQDLKKSKFS-DTLHRFWKKEHDWGWKKFMELPKLK 174

Query: 121 DPIGGFIVNDICV-IEAEITVCNSEEHDQSQLNNSLPEQ-ISSSSQRDLVD--FKGLVKI 176
           D   GFI    C+ IEA++ V   E  D+       P + +    +R+LV   F+ + +I
Sbjct: 175 D---GFIDESGCLTIEAKVQVIR-ERVDR-------PFRCLDCGYRRELVRVYFQNVEQI 223

Query: 177 EKAFVP--------LLEEVCSWHPSLVEFL--KKRSRTHMFNEWAFTAL-GRVLHFLKNK 225
            + FV         L+E+   W    V +L   + SR  M  E     L G V HF   K
Sbjct: 224 CRRFVEEKRSKLGRLIEDKARWTSFGVFWLGMDQNSRRRMCREKVDVILKGVVKHFFVEK 283

Query: 226 KV 227
           +V
Sbjct: 284 EV 285


>AT2G25320.1 | Symbols:  | TRAF-like family protein |
           chr2:10781951-10788065 REVERSE LENGTH=1673
          Length = 1673

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 78/146 (53%), Gaps = 10/146 (6%)

Query: 3   KSPEARVDKFTWKIENFSKLDSRTSLNFKKL----FYSQNFFLCGHPWWICIYPMGENVD 58
           +  +  + KFTW+IENF++L  +  L  +K+      S+ F +      + +YP G++  
Sbjct: 396 RKSDGHMGKFTWRIENFTRL--KDLLKKRKITGLCIKSKRFQIGNRDCRLIVYPRGQSQP 453

Query: 59  --YFKIYLDV-DSLPRG-WGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFI 114
             +  ++L+V DS     W  F    L+++NQ   + ++  E+++ +++A   +G+ +F+
Sbjct: 454 PCHLSVFLEVTDSRSSSDWSCFVSHRLSVVNQRLEEKSVTKESQNRYSKAAKDWGWREFV 513

Query: 115 TFSELRDPIGGFIVNDICVIEAEITV 140
           T + L D   GF+V D  V  AE+ +
Sbjct: 514 TLTSLFDQDSGFLVQDTVVFSAEVLI 539



 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 17/138 (12%)

Query: 14  WKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGEN---VDYFKIYLDVDSLP 70
           W +E+F+++ +       K  +S+ F + G+   + +YP G++     Y  IYL +   P
Sbjct: 75  WTVESFTRVKA-------KALWSKYFDVGGYDCRLLVYPRGDSQALPGYISIYLQIMD-P 126

Query: 71  RG-----WGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
           RG     W  FA + L+++N  +  +TI  ++ H F+     +G+  F   S + DP  G
Sbjct: 127 RGTTSSRWDCFASYRLSIVNLVDDSLTIHKDSWHRFSSKKKSHGWCDFTLNSSILDPKMG 186

Query: 126 FIV-NDICVIEAEITVCN 142
           F+  ND  +I A+I + N
Sbjct: 187 FLFNNDSLLITADILILN 204


>AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 |
           chr3:21591618-21592836 REVERSE LENGTH=301
          Length = 301

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 13/139 (9%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG-ENVDYFKIYLDV--- 66
           K TW I+NF+ L          L YS +F + G  W +  YP G  N +   ++L V   
Sbjct: 8   KITWTIKNFASL-------LSDLIYSDHFVVGGCKWHLRAYPKGYNNANSLSLFLGVAVP 60

Query: 67  DSLPRGWGEFADFTLALINQTNHKMTIRY--EAKHDFTEAGYLYGYSKFITFSELRDPIG 124
            SLP GW     F L L+NQ + K++     E +  F E    +G S     +E+     
Sbjct: 61  TSLPSGWRRHTKFRLTLVNQLSDKLSQSKLNELEQWFDEKTTNWGLSSMCPLNEIHAKDS 120

Query: 125 GFIVNDICVIEAEITVCNS 143
           GF++N    I  EI V  +
Sbjct: 121 GFLLNGELKIVVEIKVLET 139


>AT3G17380.1 | Symbols:  | TRAF-like family protein |
           chr3:5950240-5952124 FORWARD LENGTH=309
          Length = 309

 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 16/146 (10%)

Query: 1   MIKSPEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGE---NV 57
           MIK  +A   K  WKIENFSKLD       K+ + S  FF     W I  YP G      
Sbjct: 167 MIK--DATSSKHVWKIENFSKLD-------KESYDSNAFFAGDRKWKIEFYPTGTKQGTG 217

Query: 58  DYFKIYL---DVDSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFI 114
            +  IYL   D +++  G   F +FT+ + +Q   +  I  +    F+ +   +G+ K++
Sbjct: 218 THLSIYLTLVDPETISDGTKIFVEFTIRIFDQLQGRH-IAGKVTKWFSRSSSEHGWVKYV 276

Query: 115 TFSELRDPIGGFIVNDICVIEAEITV 140
           +      P  G ++ D+C++EA++ V
Sbjct: 277 SMVYFTQPNSGLLLKDVCLVEADVCV 302


>AT3G58410.1 | Symbols:  | TRAF-like family protein |
           chr3:21604871-21606229 REVERSE LENGTH=328
          Length = 328

 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 60/131 (45%), Gaps = 27/131 (20%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDV---D 67
           KF W I+NFS      SL  KK FYS  F +    W + IYP G N DY  ++L+V    
Sbjct: 29  KFAWVIKNFS------SLQCKK-FYSVPFQIGDCKWRLSIYPKGNNCDYLSLFLEVADFK 81

Query: 68  SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
           SLP GW  +    L             Y  K +    G+LY     +  ++L D   GF+
Sbjct: 82  SLPSGWRRYVKLRL-------------YIVKQEMWGWGFLY----MLPLTKLHDEKEGFL 124

Query: 128 VNDICVIEAEI 138
           VN   +I AE+
Sbjct: 125 VNGELMIVAEV 135


>AT2G25330.1 | Symbols:  | TRAF-like family protein |
           chr2:10788946-10791331 REVERSE LENGTH=693
          Length = 693

 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 25/188 (13%)

Query: 14  WKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV---DYFKIYLDVDSLP 70
           W +E+F+++ +       K  +S+ F + G+   + +YP G++        IYL +   P
Sbjct: 50  WTVESFTRVKA-------KALWSKYFDVGGYDCRLLVYPRGDSQALPGSISIYLQIID-P 101

Query: 71  RG-----WGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
           RG     W  FA + L++IN  +  +TIR  + H F+     +G+  F   S + DP  G
Sbjct: 102 RGTSSSLWDCFASYQLSIINHVDDSLTIRKNSWHRFSNKKRSHGWCDFTLNSSVLDPKMG 161

Query: 126 FIV-NDICVIEAEITVCN-----SEEHDQSQLNNSLPEQISSS---SQRDLVDFKGLVKI 176
           F+  ND  +I A+I + N     S +++   +  S+ + +S +   +  +   FK ++K 
Sbjct: 162 FLFNNDSLLITADIMILNESVSFSIDNNNESVVGSMTDVLSGTFTWTVENFSMFKEMIKT 221

Query: 177 EKAFVPLL 184
           +K   P+ 
Sbjct: 222 QKITSPVF 229



 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 7/135 (5%)

Query: 11  KFTWKIENFSKL-DSRTSLNFKKLFY-SQNFFLCGHPWWICIYPMGENV--DYFKIYLDV 66
           KF+W+IENF+ L D         L+  S+ F +      + +YP G++    +  I+L+V
Sbjct: 359 KFSWRIENFTSLVDLLEKRKITGLYIKSKRFQIGNRDCRLIVYPRGQSQPPSHLSIFLEV 418

Query: 67  DSLPRGWGE---FADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPI 123
                   +   F    L+++NQ + + ++  E+++ F++A   +G+ +F+T + L D  
Sbjct: 419 TDSRSSSSDWSCFVSHRLSVVNQRSEEKSVTKESQNRFSKAEKDWGWREFVTLTSLFDQD 478

Query: 124 GGFIVNDICVIEAEI 138
            GF+V D  V   E+
Sbjct: 479 SGFLVQDSVVFSVEV 493


>AT1G04300.3 | Symbols:  | TRAF-like superfamily protein |
           chr1:1148818-1153895 REVERSE LENGTH=1082
          Length = 1082

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 46/250 (18%)

Query: 5   PEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIY 63
           P     ++TWKI  FS++  R          S  F   G+ W+I IYP G +V ++  ++
Sbjct: 63  PSELYGQYTWKIPKFSEITKREH-------RSNVFEAGGYKWYILIYPQGCDVCNHLSLF 115

Query: 64  LDVDS-----------LPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSK 112
           L V +           L  GW +FA FT+++++Q   K     +  H F +  + +G+ K
Sbjct: 116 LCVANYDKLLPGSFAILEAGWSQFAQFTISVLSQDLKKSKFS-DTLHRFWKKEHDWGWKK 174

Query: 113 FITFSELRDPIGGFIVNDICV-IEAEITVCNSEEHDQSQLNNSLPEQ-ISSSSQRDLVD- 169
           F+   +L+D   GFI    C+ IEA++ V   E  D+       P + +    +R+LV  
Sbjct: 175 FMELPKLKD---GFIDESGCLTIEAKVQVIR-ERVDR-------PFRCLDCGYRRELVRV 223

Query: 170 -FKGLVKIEKAFVP--------LLEEVCSWHPSLVEFL--KKRSRTHMFNEWAFTAL-GR 217
            F+ + +I + FV         L+E+   W    V +L   + SR  M  E     L G 
Sbjct: 224 YFQNVEQICRRFVEEKRSKLGRLIEDKARWTSFGVFWLGMDQNSRRRMCREKVDVILKGV 283

Query: 218 VLHFLKNKKV 227
           V HF   K+V
Sbjct: 284 VKHFFVEKEV 293


>AT3G58440.1 | Symbols:  | TRAF-like superfamily protein |
           chr3:21618446-21621249 REVERSE LENGTH=601
          Length = 601

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 14/138 (10%)

Query: 10  DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVD-YFKIYLDVD- 67
           DKFTW +E FS L        K   YS  F + G  W +  +  G   D YF +YLD++ 
Sbjct: 9   DKFTWVLEKFSSL--------KDQCYSPVFTVAGCNWRLLSFLKGAKNDRYFSVYLDLEP 60

Query: 68  -SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEA-GYLYGYSKFITFSELRDPIGG 125
            SLP GW     F++ L N   +  T R      F +A   ++G+  F+   +L +   G
Sbjct: 61  GSLPPGWRREVKFSITLDNVCPN--TDRVLGGPCFFDAKSNIWGFQDFLLLEKLVNIAEG 118

Query: 126 FIVNDICVIEAEITVCNS 143
           F+VND   I AE+ V  S
Sbjct: 119 FLVNDRLTIVAEVDVLPS 136


>AT5G52330.1 | Symbols:  | TRAF-like superfamily protein |
           chr5:21247596-21249732 REVERSE LENGTH=397
          Length = 397

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)

Query: 5   PEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIY 63
           P     K TWKI+ FS++  R        F S  F + G+ W I +YP G +V ++  ++
Sbjct: 14  PSELYGKNTWKIKKFSQISKRE-------FASSVFEIGGYSWHILMYPEGCDVSNHLSLF 66

Query: 64  LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
           L V   D L  GW + A FT++++++   K     +  H F +  + +G+ KF+   +LR
Sbjct: 67  LCVANHDELLPGWSQLAQFTISVMHKDPKKSKFS-DTLHRFWKKEHDWGWKKFMELPKLR 125

Query: 121 DPIGGFIVNDICV-IEAEITV 140
           D   GFI +  C+ IE ++ V
Sbjct: 126 D---GFIDDSGCLTIETKVQV 143


>AT5G43560.2 | Symbols:  | TRAF-like superfamily protein |
           chr5:17501043-17505526 FORWARD LENGTH=1055
          Length = 1055

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 16/141 (11%)

Query: 5   PEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIY 63
           P     K TW IE FS ++       K+      F + G+ W+I IYP G +V ++  ++
Sbjct: 64  PSQLFGKNTWTIEKFSDIN-------KRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLF 116

Query: 64  LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
           L V   + L  GW  FA FT+A+ N+ + K +   +  H F +  + +G+ KFI   +L+
Sbjct: 117 LCVAHHEKLLPGWSHFAQFTIAVSNK-DPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLK 175

Query: 121 DPIGGFIVNDICV-IEAEITV 140
           +   GFI +  C+ I+A++ V
Sbjct: 176 E---GFIDDSGCLTIKAQVQV 193


>AT5G43560.1 | Symbols:  | TRAF-like superfamily protein |
           chr5:17501043-17505526 FORWARD LENGTH=1055
          Length = 1055

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 16/141 (11%)

Query: 5   PEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIY 63
           P     K TW IE FS ++       K+      F + G+ W+I IYP G +V ++  ++
Sbjct: 64  PSQLFGKNTWTIEKFSDIN-------KRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLF 116

Query: 64  LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
           L V   + L  GW  FA FT+A+ N+ + K +   +  H F +  + +G+ KFI   +L+
Sbjct: 117 LCVAHHEKLLPGWSHFAQFTIAVSNK-DPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLK 175

Query: 121 DPIGGFIVNDICV-IEAEITV 140
           +   GFI +  C+ I+A++ V
Sbjct: 176 E---GFIDDSGCLTIKAQVQV 193


>AT2G01790.1 | Symbols:  | TRAF-like family protein |
           chr2:341322-342480 REVERSE LENGTH=269
          Length = 269

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 57/133 (42%), Gaps = 13/133 (9%)

Query: 14  WKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGEN---VDYFKIYL---DVD 67
           W I NFS LDS          YS  F + G  W +   P G N    DYF +YL   D +
Sbjct: 11  WVINNFSFLDSDR-------VYSDIFVVGGCKWCLLALPEGNNNYIYDYFSLYLCVPDSE 63

Query: 68  SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
            LP GW   A  +  ++NQ   +++ + E  + F E     G+         +    GF+
Sbjct: 64  YLPSGWRRRAKVSFTMVNQVTGELSQQQEGVYWFDEKNTTQGFGSMFRLLVFQSSYKGFL 123

Query: 128 VNDICVIEAEITV 140
           VN    I AE+ V
Sbjct: 124 VNGEVDIVAEVDV 136


>AT2G05420.1 | Symbols:  | TRAF-like family protein |
           chr2:1983901-1985341 FORWARD LENGTH=297
          Length = 297

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 19/140 (13%)

Query: 12  FTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG-ENVDYFK-------IY 63
            TW IENFS L S +        +S  F +    W +  YP G E   Y         +Y
Sbjct: 10  ITWVIENFSSLQSAS-------IHSDQFVVGDCKWRLKAYPKGNEKATYLAYRANNLALY 62

Query: 64  LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
           L+V    S P GW     F+L L+NQ + K++   E++H F       G+   I  + L 
Sbjct: 63  LNVANSKSFPIGWTRHTKFSLTLVNQKSEKLSKLTESQHWFDHKSTSRGFPAMIPLTNLH 122

Query: 121 DPIGGFIVNDICVIEAEITV 140
               GF+VN    + A++ V
Sbjct: 123 TN-EGFLVNGELTLVAKVEV 141


>AT2G05410.1 | Symbols:  | TRAF-like family protein |
           chr2:1977490-1978553 FORWARD LENGTH=265
          Length = 265

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 6/95 (6%)

Query: 51  YPMGENV--DYFKIYLDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAG 105
           YP G N   D F ++L+V   +SLP GW   A  + +L+NQ + K++ R   +H F +  
Sbjct: 3   YPKGINKAHDSFSLFLNVPDNESLPTGWRRHAKVSFSLVNQGSEKLSQRKVTQHWFVQKA 62

Query: 106 YLYGYSKFITFSELRDPIGGFIVNDICVIEAEITV 140
           + +G+   IT +EL   + GF+VN    + A+I V
Sbjct: 63  FTWGFPVMITHTELNAKM-GFLVNGELKVVAKIEV 96


>AT1G04300.4 | Symbols:  | TRAF-like superfamily protein |
           chr1:1148818-1153895 REVERSE LENGTH=1055
          Length = 1055

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 31/216 (14%)

Query: 31  KKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIYLDV---DSLPRGWGEFADFTLALINQ 86
           K+   S  F   G+ W+I IYP G +V ++  ++L V   D L  GW +FA FT+++++Q
Sbjct: 63  KREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKLLPGWSQFAQFTISVLSQ 122

Query: 87  TNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFIVNDICV-IEAEITVCNSEE 145
              K     +  H F +  + +G+ KF+   +L+D   GFI    C+ IEA++ V   E 
Sbjct: 123 DLKKSKFS-DTLHRFWKKEHDWGWKKFMELPKLKD---GFIDESGCLTIEAKVQVIR-ER 177

Query: 146 HDQSQLNNSLPEQ-ISSSSQRDLVD--FKGLVKIEKAFVP--------LLEEVCSWHPSL 194
            D+       P + +    +R+LV   F+ + +I + FV         L+E+   W    
Sbjct: 178 VDR-------PFRCLDCGYRRELVRVYFQNVEQICRRFVEEKRSKLGRLIEDKARWTSFG 230

Query: 195 VEFL--KKRSRTHMFNEWAFTAL-GRVLHFLKNKKV 227
           V +L   + SR  M  E     L G V HF   K+V
Sbjct: 231 VFWLGMDQNSRRRMCREKVDVILKGVVKHFFVEKEV 266


>AT1G31390.1 | Symbols:  | TRAF-like family protein |
           chr1:11243191-11244392 REVERSE LENGTH=268
          Length = 268

 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 13/125 (10%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFK---IYLDV- 66
           K TW I+NFS + S+          S  F +    W +  YP G      K   +YL+V 
Sbjct: 8   KITWTIKNFSFVQSQA-------IDSDIFVVGDSKWHLVAYPKGNGESTNKCLSLYLNVA 60

Query: 67  --DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIG 124
              SLP GW     + L ++NQ + K++ +   +  F +  ++ G+   +  S+L D  G
Sbjct: 61  DFQSLPNGWKRHIKYRLTVVNQMSEKLSEQEVIQGWFYKNFHISGFQTMLPLSKLLDKNG 120

Query: 125 GFIVN 129
           GF+VN
Sbjct: 121 GFLVN 125


>AT1G31400.1 | Symbols:  | TRAF-like family protein |
           chr1:11245225-11246481 REVERSE LENGTH=278
          Length = 278

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 16/136 (11%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG------ENVDYFKIYL 64
           + TW I+NFS L S          Y   F +    W +  YP G      + +  F    
Sbjct: 8   RITWTIKNFSSLQSHA-------IYFDIFVVGDTKWHLLAYPKGYGDSINKCLSLFLGVP 60

Query: 65  DVDSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIG 124
           D D LP GW     + L ++NQ + K++ +  A+  F      +G    +  +EL    G
Sbjct: 61  DPDDLPSGWKRHIIYRLTVVNQMSEKLSKQEVARGGFYPRSLTFGSQVMLPLTEL---YG 117

Query: 125 GFIVNDICVIEAEITV 140
           GF+V+    I AE+ V
Sbjct: 118 GFLVSGQVKIVAEVGV 133


>AT3G58220.2 | Symbols:  | TRAF-like family protein |
           chr3:21564677-21566435 REVERSE LENGTH=453
          Length = 453

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 13/138 (9%)

Query: 2   IKSPEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYF 60
           I SP  + ++F+W I++FS L  R         YS  F + G  W +  YPMG  +  Y 
Sbjct: 4   IGSPLGK-NEFSWVIKDFSSLGVRA-------IYSDEFVIGGCKWRLIAYPMGNRIKKYM 55

Query: 61  KIYLDV-DS--LPRGWGEFADFTLALINQTNHKMT-IRYEAKHDFTEAGYLYGYSKFITF 116
            +Y++V DS  LP GW    +  + ++N   +K +  +Y     F +    +GY   I  
Sbjct: 56  SLYVEVADSKHLPSGWSINTELRMEVVNHNLYKPSQQKYRKNLWFDQKTPSWGYKTMIRH 115

Query: 117 SELRDPIGGFIVNDICVI 134
           S+L    G  +  ++ ++
Sbjct: 116 SKLSGEEGFLVSGEVTIV 133


>AT4G09780.1 | Symbols:  | TRAF-like family protein |
           chr4:6159538-6161378 REVERSE LENGTH=427
          Length = 427

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 35/160 (21%)

Query: 9   VDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGE-NVDYFKIYLD-V 66
            +KFTWKI +FSKL        KK  YS  F +    W I I P G+  V    +Y+  +
Sbjct: 212 TNKFTWKISDFSKLGD------KKYHYSDEFVVGERKWRIKISPKGDKKVRALSVYVQAM 265

Query: 67  DSLPRGWGE--FADFTLALINQTNHKMTIRYEAKHDFTEAGYL--------------YGY 110
           + LP       +A   L L+NQ N   T   E +  +  + +L              YG 
Sbjct: 266 EYLPNAVASTTYAKLKLQLMNQKN---TNHIEKRGTYQTSFFLYLVFHFFSREKEDGYGT 322

Query: 111 SKFITFSELRDPIGGFIVND--------ICVIEAEITVCN 142
           S+ I+  +L D   G++V D        +CV E ++ +C+
Sbjct: 323 SELISVEDLNDESKGYLVEDTIVLETTLLCVTETKVKLCD 362


>AT3G58240.1 | Symbols:  | TRAF-like superfamily protein |
           chr3:21568530-21569827 REVERSE LENGTH=317
          Length = 317

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 12/139 (8%)

Query: 10  DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIY----LD 65
           +KFTW I+NF  +  +         YS  F + G+ W I  Y    +   F       +D
Sbjct: 7   NKFTWVIKNFCSVSPKP-------IYSDQFLIGGNKWHILAYSKKRDGHQFLCLDLELVD 59

Query: 66  VDSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
            + LP  W +    +  ++N  + K++ +   KH F +     G S F   SEL D   G
Sbjct: 60  CEFLPSEWRKVVKVSFTVVNFFSKKLSRQIGLKHCFNKKERSKGGSLF-HLSELTDKKSG 118

Query: 126 FIVNDICVIEAEITVCNSE 144
           F+V+    I A+ITV  ++
Sbjct: 119 FLVDGEVEIVAQITVLETD 137


>AT3G58220.1 | Symbols:  | TRAF-like family protein |
           chr3:21565173-21566435 REVERSE LENGTH=351
          Length = 351

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 13/138 (9%)

Query: 2   IKSPEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYF 60
           I SP  + ++F+W I++FS L  R         YS  F + G  W +  YPMG  +  Y 
Sbjct: 4   IGSPLGK-NEFSWVIKDFSSLGVRA-------IYSDEFVIGGCKWRLIAYPMGNRIKKYM 55

Query: 61  KIYLDV-DS--LPRGWGEFADFTLALINQTNHKMT-IRYEAKHDFTEAGYLYGYSKFITF 116
            +Y++V DS  LP GW    +  + ++N   +K +  +Y     F +    +GY   I  
Sbjct: 56  SLYVEVADSKHLPSGWSINTELRMEVVNHNLYKPSQQKYRKNLWFDQKTPSWGYKTMIRH 115

Query: 117 SELRDPIGGFIVNDICVI 134
           S+L    G  +  ++ ++
Sbjct: 116 SKLSGEEGFLVSGEVTIV 133


>AT3G58200.1 | Symbols:  | TRAF-like family protein |
           chr3:21560086-21561358 REVERSE LENGTH=319
          Length = 319

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 11/122 (9%)

Query: 10  DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG----ENVDYFKIYLD 65
           +KF W I+NFS L S          +S  F +    W +  YP G         F +  D
Sbjct: 7   NKFRWVIKNFSSLGSER-------VFSDIFVVGSCKWRLMAYPKGVRDNRCFSLFLVVTD 59

Query: 66  VDSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
             +LP  W       L ++NQ + +++I  E +  F +    +G+   +  +EL+   GG
Sbjct: 60  FKTLPCDWKRHTRLRLNVVNQLSEELSILKETQMWFDQKTPAWGFLAMLPLTELKAENGG 119

Query: 126 FI 127
           F+
Sbjct: 120 FL 121


>AT3G58290.3 | Symbols:  | TRAF-like superfamily protein |
           chr3:21580572-21581861 REVERSE LENGTH=264
          Length = 264

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 46/273 (16%)

Query: 11  KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYF---------- 60
           KF W I+NFS      SL  +  + S    +    W +  YP G N D+           
Sbjct: 11  KFVWVIKNFS------SLQLQDCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGDHL 64

Query: 61  KIYLDVD--SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSE 118
            +YL+VD  SLP GW ++  F   ++NQ +   +++        E+G +          +
Sbjct: 65  SLYLEVDFESLPCGWRQYTQFRFTVVNQISEHSSVKRVEMLQKDESGLI---------RK 115

Query: 119 LRDPIGGFIVNDICVIEAEITVCNSEEHDQSQLNNSLPEQISSSSQRDLVDFKGLVK--- 175
           LR+  G  IV ++   EA  T   +   D S+          SSS+ D  D   +VK   
Sbjct: 116 LRN--GLMIVAEVETFEAVSTSQVAAVRDDSEWT---LLGYYSSSEEDKDDVTVVVKGFH 170

Query: 176 IEKAFVPLLEEVCSWHPSLVE--FLKKRSRTHMFNEWAFTALGRVLHFLK--NKKVKDMN 231
           +  + V  ++E+   HP L     LK ++  +++       +G +L  +K  +K  K++ 
Sbjct: 171 VLDSQVNQVKEIFEKHPDLATNLVLKNQNLKNVY-------MGFLLDLIKTLSKLPKELT 223

Query: 232 DDACNHLQILWEELEAFRFDLSWLKPHVQFALD 264
           ++  N       +L    F L WL+  +  AL+
Sbjct: 224 EEDLNFADSTLSDLTNAGFMLDWLRLKLNRALE 256


>AT2G42470.1 | Symbols:  | TRAF-like family protein |
           chr2:17679887-17685187 REVERSE LENGTH=898
          Length = 898

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 39/328 (11%)

Query: 12  FTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVD-YFKIYLDVD--- 67
            T  + NFS+  S  +        S  F   G  W+I  YP G   D Y  ++L  D   
Sbjct: 492 LTLTVTNFSQKSSPIN--------SPPFPSGGCNWYIKFYPKGSADDNYLSLFLSPDDPK 543

Query: 68  SLPRGWGEFADFTLALINQTNHKMTIRYEAKHD-FTEAGYLYGYSKFITFSELRDPIGGF 126
           SL   W   A+F   L+NQ+  ++    E     F +    +G+ + +   +L D I  F
Sbjct: 544 SLGLNWKRRANFYFVLLNQSGKELHRTPEIGDQWFCDDSLSWGFPQTLPRKKLLDKI--F 601

Query: 127 IVNDICVIEAEITVCNSEEH--------DQSQLNNSLPEQISSSSQRDLVDFKGLVKIEK 178
           + ND   IE  I V    E             L +SL  +    S+++ VD  G  K+  
Sbjct: 602 LDNDRFNIEIYIKVIEVVEGYHMFPASFTNKLLRSSL--EYPDKSEKETVDINGF-KVLS 658

Query: 179 AFVPLLEEVCSWHPSLVEFLKKRSRTHMFNEWAFTALGRVLHFLKNKKVKDMNDDACNHL 238
           + V  ++ +   HP + E    RS+  +      + L RV+  +  K  + +++   +++
Sbjct: 659 SQVTSVKRIFEEHPDIAEDF--RSKNQVVKTEYMSVLLRVIETMA-KPPQSISETELSNV 715

Query: 239 QILWEELEAFRFDLSWLKPHV-QFALDIKSYHERAVHVKKLRKNVDILEANLKIARRELV 297
                EL    F L WLK  + +  +  K  +     +++L ++V  LE  +   + E+ 
Sbjct: 716 HSELTELTEVGFKLEWLKAKLEEVCVAFKKANADGCRIQQLEEHVKNLEQTVSDLKVEMD 775

Query: 298 KAEEGFEER---------DLNAELGYGK 316
           K +     +         DL  ELG  K
Sbjct: 776 KEKAKSTAKVLSLEDTLSDLKTELGKEK 803


>AT5G26320.1 | Symbols:  | TRAF-like family protein |
           chr5:9238310-9241236 FORWARD LENGTH=352
          Length = 352

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 15/143 (10%)

Query: 16  IENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG---------ENVDYFKIYLDV 66
           I +FS +  R+     + F S  F   G+ W   ++  G         EN+  +    + 
Sbjct: 66  ITSFSVIKGRS-----EAFESSTFEAAGYKWRFMLFVNGNQNDPDGGHENMALYVGIKET 120

Query: 67  DSLPRGWGEFADFTLALINQTNHK-MTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
           +S PRGW    D  L + N+  HK +T+       +  A   +G+   I  + L DP  G
Sbjct: 121 ESFPRGWEVNVDLKLFVHNEKLHKYLTVSDGTVKRYEAAKTYWGFGNLIPRTTLLDPNEG 180

Query: 126 FIVNDICVIEAEITVCNSEEHDQ 148
           +I++D     AEI++ N  E  +
Sbjct: 181 YILHDTLSFGAEISIVNPAEKQE 203


>AT4G09770.2 | Symbols:  | TRAF-like family protein |
           chr4:6154534-6155859 REVERSE LENGTH=297
          Length = 297

 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 12/134 (8%)

Query: 10  DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGEN-VDYFKIYLDVDS 68
           +KFTWKI +FS +        K+ +YS  F +    W + I P G+  V    +Y+   +
Sbjct: 159 NKFTWKISHFSYIGD------KRYYYSDEFVVGDRKWRLKISPKGDKKVRALSVYVQAMA 212

Query: 69  -LPRGWGE--FADFTLALINQTNHKMTIRYEAKHDFT-EAGYLYGYSKFITFSELRDPIG 124
            LP       +A   L L+NQ N    I     H ++ E G   G S+ I+  +L D   
Sbjct: 213 YLPNAVASSTYAKLRLRLLNQKNSNH-IEKRVFHFYSRENGDGSGISELISVEDLNDESK 271

Query: 125 GFIVNDICVIEAEI 138
           G++V D  V+E  +
Sbjct: 272 GYLVEDSIVLETTL 285


>AT4G09770.1 | Symbols:  | TRAF-like family protein |
           chr4:6154534-6155859 REVERSE LENGTH=297
          Length = 297

 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 12/134 (8%)

Query: 10  DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGEN-VDYFKIYLDVDS 68
           +KFTWKI +FS +        K+ +YS  F +    W + I P G+  V    +Y+   +
Sbjct: 159 NKFTWKISHFSYIGD------KRYYYSDEFVVGDRKWRLKISPKGDKKVRALSVYVQAMA 212

Query: 69  -LPRGWGE--FADFTLALINQTNHKMTIRYEAKHDFT-EAGYLYGYSKFITFSELRDPIG 124
            LP       +A   L L+NQ N    I     H ++ E G   G S+ I+  +L D   
Sbjct: 213 YLPNAVASSTYAKLRLRLLNQKNSNH-IEKRVFHFYSRENGDGSGISELISVEDLNDESK 271

Query: 125 GFIVNDICVIEAEI 138
           G++V D  V+E  +
Sbjct: 272 GYLVEDSIVLETTL 285