Miyakogusa Predicted Gene
- Lj0g3v0322529.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0322529.1 Non Chatacterized Hit- tr|G7LEE9|G7LEE9_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,45.52,9e-19,FAMILY NOT NAMED,NULL; TRAF
domain-like,TRAF-like; meprin and TRAF homology,MATH;
coiled-coil,NULL; ,CUFF.21884.1
(317 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 117 1e-26
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 117 1e-26
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 117 1e-26
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 114 1e-25
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 114 1e-25
AT3G58210.1 | Symbols: | TRAF-like family protein | chr3:215626... 80 2e-15
AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein... 77 2e-14
AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein... 77 2e-14
AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:215890... 75 4e-14
AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domain... 74 2e-13
AT3G58290.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 73 2e-13
AT3G58250.1 | Symbols: | TRAF-like family protein | chr3:215707... 73 3e-13
AT3G58360.1 | Symbols: | TRAF-like family protein | chr3:215935... 72 7e-13
AT3G58260.1 | Symbols: | TRAF-like family protein | chr3:215737... 68 7e-12
AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology domain... 68 1e-11
AT3G44790.1 | Symbols: | TRAF-like family protein | chr3:163287... 67 1e-11
AT1G04300.1 | Symbols: | TRAF-like superfamily protein | chr1:1... 65 4e-11
AT2G25320.1 | Symbols: | TRAF-like family protein | chr2:107819... 64 1e-10
AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 | chr3:2... 62 4e-10
AT3G17380.1 | Symbols: | TRAF-like family protein | chr3:595024... 62 6e-10
AT3G58410.1 | Symbols: | TRAF-like family protein | chr3:216048... 62 8e-10
AT2G25330.1 | Symbols: | TRAF-like family protein | chr2:107889... 61 9e-10
AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:1... 61 1e-09
AT3G58440.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 60 1e-09
AT5G52330.1 | Symbols: | TRAF-like superfamily protein | chr5:2... 60 1e-09
AT5G43560.2 | Symbols: | TRAF-like superfamily protein | chr5:1... 60 2e-09
AT5G43560.1 | Symbols: | TRAF-like superfamily protein | chr5:1... 60 2e-09
AT2G01790.1 | Symbols: | TRAF-like family protein | chr2:341322... 60 2e-09
AT2G05420.1 | Symbols: | TRAF-like family protein | chr2:198390... 57 1e-08
AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:197749... 57 2e-08
AT1G04300.4 | Symbols: | TRAF-like superfamily protein | chr1:1... 56 4e-08
AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:112431... 55 5e-08
AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:112452... 54 1e-07
AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:215646... 54 2e-07
AT4G09780.1 | Symbols: | TRAF-like family protein | chr4:615953... 54 2e-07
AT3G58240.1 | Symbols: | TRAF-like superfamily protein | chr3:2... 53 3e-07
AT3G58220.1 | Symbols: | TRAF-like family protein | chr3:215651... 53 3e-07
AT3G58200.1 | Symbols: | TRAF-like family protein | chr3:215600... 52 7e-07
AT3G58290.3 | Symbols: | TRAF-like superfamily protein | chr3:2... 52 7e-07
AT2G42470.1 | Symbols: | TRAF-like family protein | chr2:176798... 50 2e-06
AT5G26320.1 | Symbols: | TRAF-like family protein | chr5:923831... 50 3e-06
AT4G09770.2 | Symbols: | TRAF-like family protein | chr4:615453... 48 7e-06
AT4G09770.1 | Symbols: | TRAF-like family protein | chr4:615453... 48 7e-06
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 10/133 (7%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVD--- 67
KFTW I NFS+ ++R YS F + G+ W I I+P G NVD+ +YLDV
Sbjct: 56 KFTWTIPNFSRQNTRKH-------YSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAA 108
Query: 68 SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
SLP GW +A F+LA++NQ + + T+R E +H F +G++ F+ SEL DP G++
Sbjct: 109 SLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYL 168
Query: 128 VNDICVIEAEITV 140
VND ++EAE+ V
Sbjct: 169 VNDTVLVEAEVAV 181
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 10/133 (7%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVD--- 67
KFTW I NFS+ ++R YS F + G+ W I I+P G NVD+ +YLDV
Sbjct: 55 KFTWTIPNFSRQNTRKH-------YSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAA 107
Query: 68 SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
SLP GW +A F+LA++NQ + + T+R E +H F +G++ F+ SEL DP G++
Sbjct: 108 SLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYL 167
Query: 128 VNDICVIEAEITV 140
VND ++EAE+ V
Sbjct: 168 VNDTVLVEAEVAV 180
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 10/133 (7%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVD--- 67
KFTW I NFS+ ++R YS F + G+ W I I+P G NVD+ +YLDV
Sbjct: 56 KFTWTIPNFSRQNTRKH-------YSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAA 108
Query: 68 SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
SLP GW +A F+LA++NQ + + T+R E +H F +G++ F+ SEL DP G++
Sbjct: 109 SLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYL 168
Query: 128 VNDICVIEAEITV 140
VND ++EAE+ V
Sbjct: 169 VNDTVLVEAEVAV 181
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 10/133 (7%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVD--- 67
KFTW I F++L++R YS F + G+ W I I+P G NVD+ +YLDV
Sbjct: 55 KFTWTIPMFTRLNTRKH-------YSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAA 107
Query: 68 SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
+LP GW ++ F+LA++NQ N++ +IR E +H F +G++ F+ SEL +P G++
Sbjct: 108 NLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYL 167
Query: 128 VNDICVIEAEITV 140
VND +IEAE+ V
Sbjct: 168 VNDTVLIEAEVAV 180
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 10/133 (7%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVD--- 67
KFTW I F++L++R YS F + G+ W I I+P G NVD+ +YLDV
Sbjct: 54 KFTWTIPMFTRLNTRKH-------YSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAA 106
Query: 68 SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
+LP GW ++ F+LA++NQ N++ +IR E +H F +G++ F+ SEL +P G++
Sbjct: 107 NLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYL 166
Query: 128 VNDICVIEAEITV 140
VND +IEAE+ V
Sbjct: 167 VNDTVLIEAEVAV 179
>AT3G58210.1 | Symbols: | TRAF-like family protein |
chr3:21562645-21564067 REVERSE LENGTH=330
Length = 330
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 10 DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV--DYFKIYLDVD 67
+KFTW I+NFS SR + S F + G W + +YP G N D+ ++L+V
Sbjct: 7 NKFTWVIQNFSSSQSR-------VVPSNQFVIGGCKWRLLVYPEGFNKSGDHLSLFLEVA 59
Query: 68 ---SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIG 124
SLP GW A + L ++NQ + K++ R EA F + +G S I ++L G
Sbjct: 60 DPRSLPPGWSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDG 119
Query: 125 GFIVNDICVIEAEITV 140
GF+VND I AE+ V
Sbjct: 120 GFLVNDELKIVAEVNV 135
>AT3G58270.2 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 10 DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVDS- 68
+KFTW I+NFS SR + YS FF+ G W + +P G V+ +YL V
Sbjct: 7 NKFTWVIKNFSSQQSRKN-------YSDEFFVDGCKWRLLAFPKGNGVEKLSLYLAVAGS 59
Query: 69 --LPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGF 126
LP GW A F +++NQ + +++ E K+ F + +G++ ++ +L D GGF
Sbjct: 60 EFLPDGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGF 119
Query: 127 IVNDICVIEAEITV 140
+VN I +++V
Sbjct: 120 LVNGELKIVVDVSV 133
>AT3G58270.1 | Symbols: | Arabidopsis phospholipase-like protein
(PEARLI 4) with TRAF-like domain |
chr3:21576033-21577655 REVERSE LENGTH=343
Length = 343
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 10 DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDVDS- 68
+KFTW I+NFS SR + YS FF+ G W + +P G V+ +YL V
Sbjct: 7 NKFTWVIKNFSSQQSRKN-------YSDEFFVDGCKWRLLAFPKGNGVEKLSLYLAVAGS 59
Query: 69 --LPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGF 126
LP GW A F +++NQ + +++ E K+ F + +G++ ++ +L D GGF
Sbjct: 60 EFLPDGWRRHAYFHFSVVNQLSDELSQARETKNWFDASTSDWGFTSMLSLKKLHDKDGGF 119
Query: 127 IVNDICVIEAEITV 140
+VN I +++V
Sbjct: 120 LVNGELKIVVDVSV 133
>AT3G58340.1 | Symbols: | TRAF-like family protein |
chr3:21589071-21590401 REVERSE LENGTH=325
Length = 325
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDV---D 67
KF W+I+NFS L+S +S + W + +P G DY +YL+V
Sbjct: 8 KFCWEIKNFSSLNSERC-------HSVPVVIGDCKWRLVAFPKGYKADYLSLYLEVADFK 60
Query: 68 SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
SLP GW + F ++NQ + +++++ E + F + +G+ + +EL GGF+
Sbjct: 61 SLPSGWRRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFL 120
Query: 128 VNDICVIEAEI 138
VN +I AE+
Sbjct: 121 VNGQVMIVAEV 131
>AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology
domain-containing protein | chr3:16343333-16346027
FORWARD LENGTH=564
Length = 564
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 10 DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG-ENVDYFKIYLD--- 65
+KFTW I+NFS L S + S F + G W + YP G +N Y +YLD
Sbjct: 4 EKFTWVIKNFSSLQS-------EYIKSDIFVIGGCKWCLLAYPNGKQNASYLSLYLDGPT 56
Query: 66 VDSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
+ +LP G F L ++NQ + ++ R E K F + L GY + + ++L GG
Sbjct: 57 LKTLPCGCRRRIRFRLTVVNQLSENLSRRGEGKRWFDKKLPLCGYEEVLLLTKLNAKHGG 116
Query: 126 FIVNDICVIEAEITV 140
F+VN+ I AE+ V
Sbjct: 117 FLVNNEVKIVAEVDV 131
>AT3G58290.1 | Symbols: | TRAF-like superfamily protein |
chr3:21580572-21581861 REVERSE LENGTH=282
Length = 282
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 36/277 (12%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYF---------- 60
KF W I+NFS SL + + S + W + YP G N D+
Sbjct: 11 KFVWVIKNFS------SLQLQDCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGDHL 64
Query: 61 KIYLDVD--SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSE 118
+YL+VD SLP GW ++ F ++NQ + +++ E + F + +G+ + I+ ++
Sbjct: 65 SLYLEVDFESLPCGWRQYTQFRFTVVNQISEHSSVKREGRKWFDKKAPEWGWEEMISLTK 124
Query: 119 LRDPIGGFIVNDICVIEAEITVCNSEEHDQSQLNNSLPE----QISSSSQRDLVDFKGLV 174
L D GF+VN +I AE+ + Q E SSS+ D D +V
Sbjct: 125 LNDINSGFVVNGELMIVAEVETFEAVSTSQVAAVRDDSEWTLLGYYSSSEEDKDDVTVVV 184
Query: 175 K---IEKAFVPLLEEVCSWHPSLVE--FLKKRSRTHMFNEWAFTALGRVLHFLK--NKKV 227
K + + V ++E+ HP L LK ++ +++ +G +L +K +K
Sbjct: 185 KGFHVLDSQVNQVKEIFEKHPDLATNLVLKNQNLKNVY-------MGFLLDLIKTLSKLP 237
Query: 228 KDMNDDACNHLQILWEELEAFRFDLSWLKPHVQFALD 264
K++ ++ N +L F L WL+ + AL+
Sbjct: 238 KELTEEDLNFADSTLSDLTNAGFMLDWLRLKLNRALE 274
>AT3G58250.1 | Symbols: | TRAF-like family protein |
chr3:21570745-21572143 REVERSE LENGTH=317
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 12/140 (8%)
Query: 6 EARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV--DYFKIY 63
+A KF+W I+NFS L S YS F + G W + +P G + D+ +Y
Sbjct: 5 QADKKKFSWVIKNFSSLQSEK-------IYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLY 57
Query: 64 LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
LDV +SLP GW A F+ ++N K + R E H F E +G++ + EL+
Sbjct: 58 LDVAESESLPCGWRRHAQFSFTIVNHIPEKCSQRKETIHWFCEKVSDWGFTNLVPLIELK 117
Query: 121 DPIGGFIVNDICVIEAEITV 140
GF+V I EI V
Sbjct: 118 AEDSGFLVKGELKIVVEIEV 137
>AT3G58360.1 | Symbols: | TRAF-like family protein |
chr3:21593505-21594866 REVERSE LENGTH=298
Length = 298
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDV---D 67
K TW IENFS L S+ YS F + G W +YP G NVDY +YL+V +
Sbjct: 8 KITWAIENFSSLHSKK-------IYSDPFIVGGCKWRFLVYPKGNNVDYLFLYLEVADYE 60
Query: 68 SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
SL W A + L ++NQ + K + + E + F +G +E+ GF+
Sbjct: 61 SLSPEWRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKDSGFL 120
Query: 128 VNDICVIEAEITV 140
VN I AEI V
Sbjct: 121 VNGELKIVAEIEV 133
>AT3G58260.1 | Symbols: | TRAF-like family protein |
chr3:21573754-21575114 REVERSE LENGTH=321
Length = 321
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 47/313 (15%)
Query: 10 DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYF---KIYLDV 66
+ FTW I+N S L S+ F + G W + YP + D + +YL V
Sbjct: 7 NTFTWVIKNLSTLQGLE-------VRSKIFVVGGCKWRLIAYPEVNDADGYLSLSVYLGV 59
Query: 67 ----DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDP 122
+SLP GW A F+L ++NQ + ++ E + F E +G+ + ++ D
Sbjct: 60 PDCCESLPSGWKRHAKFSLTIVNQLSEGLSQVQETQAWFDENAPGWGFPPMLNLKDVSDK 119
Query: 123 IGGFIVNDICVIEAEITVCNSEEHDQSQLNNSL--PEQISSSSQRDLVDFKGLVKIEKAF 180
GGF+VND ++ + V ++ SL PE S D+ FK L K+
Sbjct: 120 YGGFLVNDEVMVAVAVDVI--------EVVGSLDAPEM---SESMDIKGFKVLPSQVKSV 168
Query: 181 VPLLEEVCSWHPSLVE--FLKKRS-RTHMFNEWAFTALGRVLHFLKNKKVKDMNDDACNH 237
L E HP + +K +S +T N L LH + ++++D +
Sbjct: 169 NRLFES----HPDIASKFSIKNQSLKTAYMN--VLLCLAETLH----QSPMEISEDDLSD 218
Query: 238 LQILWEELEAFRFDLSWLKPHVQFALDIKSYHERAVH-------VKKLRKNVDILEANLK 290
+ +++ F L WL+ + + K + +K LR+ LEA LK
Sbjct: 219 AKTTLAYMKSVGFKLDWLEKKLDELFEKKKEEADKIRMQNIEEELKDLRQKCSSLEALLK 278
Query: 291 IARRELVKAEEGF 303
+ ++ A+ F
Sbjct: 279 KEKTGVLAAKAPF 291
>AT3G27040.1 | Symbols: | Meprin and TRAF (MATH) homology
domain-containing protein | chr3:9974912-9977927 REVERSE
LENGTH=358
Length = 358
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIYLDV--- 66
KFTW I+N++ L S + YS F W + +P G N+ DYF +Y+ V
Sbjct: 96 KFTWVIKNYNSLGSGS-------VYSDTFKAGRCKWRLLAFPKGNNIYDYFFLYICVPNS 148
Query: 67 DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGF 126
+SLP GW A + ++NQ ++ + EA + F E +G+ SE++ GF
Sbjct: 149 ESLPSGWRRRAKVSFTMVNQIPGGLSQQREAVYWFDEKDTTHGFESMFLLSEIQSSDKGF 208
Query: 127 IVNDICVIEAEITV 140
+VN I AE+ V
Sbjct: 209 LVNGEVKIVAEVDV 222
>AT3G44790.1 | Symbols: | TRAF-like family protein |
chr3:16328792-16330265 FORWARD LENGTH=324
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 10 DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDV--- 66
+KFTW I+NFS L S K S F + G W++ Y +N +Y ++L V
Sbjct: 4 EKFTWVIKNFSSLQS-------KYINSDKFVIGGCKWFLKGY---QNANYLSLFLMVATS 53
Query: 67 DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGF 126
+LP GW + F L ++NQ + +++ + E + F + L G I+ ++L GGF
Sbjct: 54 KTLPCGWRRYTRFRLTVVNQLSDELSQQRETETWFDQNVVLSGNRHMISLTKLNAKKGGF 113
Query: 127 IVNDICVIEAEITV 140
+VN+ I E+ V
Sbjct: 114 LVNNEVKIVVEVDV 127
>AT1G04300.1 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1074
Length = 1074
Score = 65.5 bits (158), Expect = 4e-11, Method: Composition-based stats.
Identities = 71/242 (29%), Positives = 113/242 (46%), Gaps = 38/242 (15%)
Query: 5 PEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIY 63
P ++TWKI FS++ R S F G+ W+I IYP G +V ++ ++
Sbjct: 63 PSELYGQYTWKIPKFSEITKREH-------RSNVFEAGGYKWYILIYPQGCDVCNHLSLF 115
Query: 64 LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
L V D L GW +FA FT+++++Q K + H F + + +G+ KF+ +L+
Sbjct: 116 LCVANYDKLLPGWSQFAQFTISVLSQDLKKSKFS-DTLHRFWKKEHDWGWKKFMELPKLK 174
Query: 121 DPIGGFIVNDICV-IEAEITVCNSEEHDQSQLNNSLPEQ-ISSSSQRDLVD--FKGLVKI 176
D GFI C+ IEA++ V E D+ P + + +R+LV F+ + +I
Sbjct: 175 D---GFIDESGCLTIEAKVQVIR-ERVDR-------PFRCLDCGYRRELVRVYFQNVEQI 223
Query: 177 EKAFVP--------LLEEVCSWHPSLVEFL--KKRSRTHMFNEWAFTAL-GRVLHFLKNK 225
+ FV L+E+ W V +L + SR M E L G V HF K
Sbjct: 224 CRRFVEEKRSKLGRLIEDKARWTSFGVFWLGMDQNSRRRMCREKVDVILKGVVKHFFVEK 283
Query: 226 KV 227
+V
Sbjct: 284 EV 285
>AT2G25320.1 | Symbols: | TRAF-like family protein |
chr2:10781951-10788065 REVERSE LENGTH=1673
Length = 1673
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 3 KSPEARVDKFTWKIENFSKLDSRTSLNFKKL----FYSQNFFLCGHPWWICIYPMGENVD 58
+ + + KFTW+IENF++L + L +K+ S+ F + + +YP G++
Sbjct: 396 RKSDGHMGKFTWRIENFTRL--KDLLKKRKITGLCIKSKRFQIGNRDCRLIVYPRGQSQP 453
Query: 59 --YFKIYLDV-DSLPRG-WGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFI 114
+ ++L+V DS W F L+++NQ + ++ E+++ +++A +G+ +F+
Sbjct: 454 PCHLSVFLEVTDSRSSSDWSCFVSHRLSVVNQRLEEKSVTKESQNRYSKAAKDWGWREFV 513
Query: 115 TFSELRDPIGGFIVNDICVIEAEITV 140
T + L D GF+V D V AE+ +
Sbjct: 514 TLTSLFDQDSGFLVQDTVVFSAEVLI 539
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 17/138 (12%)
Query: 14 WKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGEN---VDYFKIYLDVDSLP 70
W +E+F+++ + K +S+ F + G+ + +YP G++ Y IYL + P
Sbjct: 75 WTVESFTRVKA-------KALWSKYFDVGGYDCRLLVYPRGDSQALPGYISIYLQIMD-P 126
Query: 71 RG-----WGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
RG W FA + L+++N + +TI ++ H F+ +G+ F S + DP G
Sbjct: 127 RGTTSSRWDCFASYRLSIVNLVDDSLTIHKDSWHRFSSKKKSHGWCDFTLNSSILDPKMG 186
Query: 126 FIV-NDICVIEAEITVCN 142
F+ ND +I A+I + N
Sbjct: 187 FLFNNDSLLITADILILN 204
>AT3G58350.1 | Symbols: RTM3 | RESTRICTED TEV MOVEMENT 3 |
chr3:21591618-21592836 REVERSE LENGTH=301
Length = 301
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG-ENVDYFKIYLDV--- 66
K TW I+NF+ L L YS +F + G W + YP G N + ++L V
Sbjct: 8 KITWTIKNFASL-------LSDLIYSDHFVVGGCKWHLRAYPKGYNNANSLSLFLGVAVP 60
Query: 67 DSLPRGWGEFADFTLALINQTNHKMTIRY--EAKHDFTEAGYLYGYSKFITFSELRDPIG 124
SLP GW F L L+NQ + K++ E + F E +G S +E+
Sbjct: 61 TSLPSGWRRHTKFRLTLVNQLSDKLSQSKLNELEQWFDEKTTNWGLSSMCPLNEIHAKDS 120
Query: 125 GFIVNDICVIEAEITVCNS 143
GF++N I EI V +
Sbjct: 121 GFLLNGELKIVVEIKVLET 139
>AT3G17380.1 | Symbols: | TRAF-like family protein |
chr3:5950240-5952124 FORWARD LENGTH=309
Length = 309
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 16/146 (10%)
Query: 1 MIKSPEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGE---NV 57
MIK +A K WKIENFSKLD K+ + S FF W I YP G
Sbjct: 167 MIK--DATSSKHVWKIENFSKLD-------KESYDSNAFFAGDRKWKIEFYPTGTKQGTG 217
Query: 58 DYFKIYL---DVDSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFI 114
+ IYL D +++ G F +FT+ + +Q + I + F+ + +G+ K++
Sbjct: 218 THLSIYLTLVDPETISDGTKIFVEFTIRIFDQLQGRH-IAGKVTKWFSRSSSEHGWVKYV 276
Query: 115 TFSELRDPIGGFIVNDICVIEAEITV 140
+ P G ++ D+C++EA++ V
Sbjct: 277 SMVYFTQPNSGLLLKDVCLVEADVCV 302
>AT3G58410.1 | Symbols: | TRAF-like family protein |
chr3:21604871-21606229 REVERSE LENGTH=328
Length = 328
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 60/131 (45%), Gaps = 27/131 (20%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIYLDV---D 67
KF W I+NFS SL KK FYS F + W + IYP G N DY ++L+V
Sbjct: 29 KFAWVIKNFS------SLQCKK-FYSVPFQIGDCKWRLSIYPKGNNCDYLSLFLEVADFK 81
Query: 68 SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
SLP GW + L Y K + G+LY + ++L D GF+
Sbjct: 82 SLPSGWRRYVKLRL-------------YIVKQEMWGWGFLY----MLPLTKLHDEKEGFL 124
Query: 128 VNDICVIEAEI 138
VN +I AE+
Sbjct: 125 VNGELMIVAEV 135
>AT2G25330.1 | Symbols: | TRAF-like family protein |
chr2:10788946-10791331 REVERSE LENGTH=693
Length = 693
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 25/188 (13%)
Query: 14 WKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV---DYFKIYLDVDSLP 70
W +E+F+++ + K +S+ F + G+ + +YP G++ IYL + P
Sbjct: 50 WTVESFTRVKA-------KALWSKYFDVGGYDCRLLVYPRGDSQALPGSISIYLQIID-P 101
Query: 71 RG-----WGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
RG W FA + L++IN + +TIR + H F+ +G+ F S + DP G
Sbjct: 102 RGTSSSLWDCFASYQLSIINHVDDSLTIRKNSWHRFSNKKRSHGWCDFTLNSSVLDPKMG 161
Query: 126 FIV-NDICVIEAEITVCN-----SEEHDQSQLNNSLPEQISSS---SQRDLVDFKGLVKI 176
F+ ND +I A+I + N S +++ + S+ + +S + + + FK ++K
Sbjct: 162 FLFNNDSLLITADIMILNESVSFSIDNNNESVVGSMTDVLSGTFTWTVENFSMFKEMIKT 221
Query: 177 EKAFVPLL 184
+K P+
Sbjct: 222 QKITSPVF 229
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 11 KFTWKIENFSKL-DSRTSLNFKKLFY-SQNFFLCGHPWWICIYPMGENV--DYFKIYLDV 66
KF+W+IENF+ L D L+ S+ F + + +YP G++ + I+L+V
Sbjct: 359 KFSWRIENFTSLVDLLEKRKITGLYIKSKRFQIGNRDCRLIVYPRGQSQPPSHLSIFLEV 418
Query: 67 DSLPRGWGE---FADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPI 123
+ F L+++NQ + + ++ E+++ F++A +G+ +F+T + L D
Sbjct: 419 TDSRSSSSDWSCFVSHRLSVVNQRSEEKSVTKESQNRFSKAEKDWGWREFVTLTSLFDQD 478
Query: 124 GGFIVNDICVIEAEI 138
GF+V D V E+
Sbjct: 479 SGFLVQDSVVFSVEV 493
>AT1G04300.3 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1082
Length = 1082
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 46/250 (18%)
Query: 5 PEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIY 63
P ++TWKI FS++ R S F G+ W+I IYP G +V ++ ++
Sbjct: 63 PSELYGQYTWKIPKFSEITKREH-------RSNVFEAGGYKWYILIYPQGCDVCNHLSLF 115
Query: 64 LDVDS-----------LPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSK 112
L V + L GW +FA FT+++++Q K + H F + + +G+ K
Sbjct: 116 LCVANYDKLLPGSFAILEAGWSQFAQFTISVLSQDLKKSKFS-DTLHRFWKKEHDWGWKK 174
Query: 113 FITFSELRDPIGGFIVNDICV-IEAEITVCNSEEHDQSQLNNSLPEQ-ISSSSQRDLVD- 169
F+ +L+D GFI C+ IEA++ V E D+ P + + +R+LV
Sbjct: 175 FMELPKLKD---GFIDESGCLTIEAKVQVIR-ERVDR-------PFRCLDCGYRRELVRV 223
Query: 170 -FKGLVKIEKAFVP--------LLEEVCSWHPSLVEFL--KKRSRTHMFNEWAFTAL-GR 217
F+ + +I + FV L+E+ W V +L + SR M E L G
Sbjct: 224 YFQNVEQICRRFVEEKRSKLGRLIEDKARWTSFGVFWLGMDQNSRRRMCREKVDVILKGV 283
Query: 218 VLHFLKNKKV 227
V HF K+V
Sbjct: 284 VKHFFVEKEV 293
>AT3G58440.1 | Symbols: | TRAF-like superfamily protein |
chr3:21618446-21621249 REVERSE LENGTH=601
Length = 601
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 10 DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVD-YFKIYLDVD- 67
DKFTW +E FS L K YS F + G W + + G D YF +YLD++
Sbjct: 9 DKFTWVLEKFSSL--------KDQCYSPVFTVAGCNWRLLSFLKGAKNDRYFSVYLDLEP 60
Query: 68 -SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEA-GYLYGYSKFITFSELRDPIGG 125
SLP GW F++ L N + T R F +A ++G+ F+ +L + G
Sbjct: 61 GSLPPGWRREVKFSITLDNVCPN--TDRVLGGPCFFDAKSNIWGFQDFLLLEKLVNIAEG 118
Query: 126 FIVNDICVIEAEITVCNS 143
F+VND I AE+ V S
Sbjct: 119 FLVNDRLTIVAEVDVLPS 136
>AT5G52330.1 | Symbols: | TRAF-like superfamily protein |
chr5:21247596-21249732 REVERSE LENGTH=397
Length = 397
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 5 PEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIY 63
P K TWKI+ FS++ R F S F + G+ W I +YP G +V ++ ++
Sbjct: 14 PSELYGKNTWKIKKFSQISKRE-------FASSVFEIGGYSWHILMYPEGCDVSNHLSLF 66
Query: 64 LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
L V D L GW + A FT++++++ K + H F + + +G+ KF+ +LR
Sbjct: 67 LCVANHDELLPGWSQLAQFTISVMHKDPKKSKFS-DTLHRFWKKEHDWGWKKFMELPKLR 125
Query: 121 DPIGGFIVNDICV-IEAEITV 140
D GFI + C+ IE ++ V
Sbjct: 126 D---GFIDDSGCLTIETKVQV 143
>AT5G43560.2 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 5 PEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIY 63
P K TW IE FS ++ K+ F + G+ W+I IYP G +V ++ ++
Sbjct: 64 PSQLFGKNTWTIEKFSDIN-------KRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLF 116
Query: 64 LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
L V + L GW FA FT+A+ N+ + K + + H F + + +G+ KFI +L+
Sbjct: 117 LCVAHHEKLLPGWSHFAQFTIAVSNK-DPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLK 175
Query: 121 DPIGGFIVNDICV-IEAEITV 140
+ GFI + C+ I+A++ V
Sbjct: 176 E---GFIDDSGCLTIKAQVQV 193
>AT5G43560.1 | Symbols: | TRAF-like superfamily protein |
chr5:17501043-17505526 FORWARD LENGTH=1055
Length = 1055
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 16/141 (11%)
Query: 5 PEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIY 63
P K TW IE FS ++ K+ F + G+ W+I IYP G +V ++ ++
Sbjct: 64 PSQLFGKNTWTIEKFSDIN-------KRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLF 116
Query: 64 LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
L V + L GW FA FT+A+ N+ + K + + H F + + +G+ KFI +L+
Sbjct: 117 LCVAHHEKLLPGWSHFAQFTIAVSNK-DPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLK 175
Query: 121 DPIGGFIVNDICV-IEAEITV 140
+ GFI + C+ I+A++ V
Sbjct: 176 E---GFIDDSGCLTIKAQVQV 193
>AT2G01790.1 | Symbols: | TRAF-like family protein |
chr2:341322-342480 REVERSE LENGTH=269
Length = 269
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 14 WKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGEN---VDYFKIYL---DVD 67
W I NFS LDS YS F + G W + P G N DYF +YL D +
Sbjct: 11 WVINNFSFLDSDR-------VYSDIFVVGGCKWCLLALPEGNNNYIYDYFSLYLCVPDSE 63
Query: 68 SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFI 127
LP GW A + ++NQ +++ + E + F E G+ + GF+
Sbjct: 64 YLPSGWRRRAKVSFTMVNQVTGELSQQQEGVYWFDEKNTTQGFGSMFRLLVFQSSYKGFL 123
Query: 128 VNDICVIEAEITV 140
VN I AE+ V
Sbjct: 124 VNGEVDIVAEVDV 136
>AT2G05420.1 | Symbols: | TRAF-like family protein |
chr2:1983901-1985341 FORWARD LENGTH=297
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 19/140 (13%)
Query: 12 FTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG-ENVDYFK-------IY 63
TW IENFS L S + +S F + W + YP G E Y +Y
Sbjct: 10 ITWVIENFSSLQSAS-------IHSDQFVVGDCKWRLKAYPKGNEKATYLAYRANNLALY 62
Query: 64 LDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELR 120
L+V S P GW F+L L+NQ + K++ E++H F G+ I + L
Sbjct: 63 LNVANSKSFPIGWTRHTKFSLTLVNQKSEKLSKLTESQHWFDHKSTSRGFPAMIPLTNLH 122
Query: 121 DPIGGFIVNDICVIEAEITV 140
GF+VN + A++ V
Sbjct: 123 TN-EGFLVNGELTLVAKVEV 141
>AT2G05410.1 | Symbols: | TRAF-like family protein |
chr2:1977490-1978553 FORWARD LENGTH=265
Length = 265
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 51 YPMGENV--DYFKIYLDV---DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAG 105
YP G N D F ++L+V +SLP GW A + +L+NQ + K++ R +H F +
Sbjct: 3 YPKGINKAHDSFSLFLNVPDNESLPTGWRRHAKVSFSLVNQGSEKLSQRKVTQHWFVQKA 62
Query: 106 YLYGYSKFITFSELRDPIGGFIVNDICVIEAEITV 140
+ +G+ IT +EL + GF+VN + A+I V
Sbjct: 63 FTWGFPVMITHTELNAKM-GFLVNGELKVVAKIEV 96
>AT1G04300.4 | Symbols: | TRAF-like superfamily protein |
chr1:1148818-1153895 REVERSE LENGTH=1055
Length = 1055
Score = 55.8 bits (133), Expect = 4e-08, Method: Composition-based stats.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 31 KKLFYSQNFFLCGHPWWICIYPMGENV-DYFKIYLDV---DSLPRGWGEFADFTLALINQ 86
K+ S F G+ W+I IYP G +V ++ ++L V D L GW +FA FT+++++Q
Sbjct: 63 KREHRSNVFEAGGYKWYILIYPQGCDVCNHLSLFLCVANYDKLLPGWSQFAQFTISVLSQ 122
Query: 87 TNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGGFIVNDICV-IEAEITVCNSEE 145
K + H F + + +G+ KF+ +L+D GFI C+ IEA++ V E
Sbjct: 123 DLKKSKFS-DTLHRFWKKEHDWGWKKFMELPKLKD---GFIDESGCLTIEAKVQVIR-ER 177
Query: 146 HDQSQLNNSLPEQ-ISSSSQRDLVD--FKGLVKIEKAFVP--------LLEEVCSWHPSL 194
D+ P + + +R+LV F+ + +I + FV L+E+ W
Sbjct: 178 VDR-------PFRCLDCGYRRELVRVYFQNVEQICRRFVEEKRSKLGRLIEDKARWTSFG 230
Query: 195 VEFL--KKRSRTHMFNEWAFTAL-GRVLHFLKNKKV 227
V +L + SR M E L G V HF K+V
Sbjct: 231 VFWLGMDQNSRRRMCREKVDVILKGVVKHFFVEKEV 266
>AT1G31390.1 | Symbols: | TRAF-like family protein |
chr1:11243191-11244392 REVERSE LENGTH=268
Length = 268
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFK---IYLDV- 66
K TW I+NFS + S+ S F + W + YP G K +YL+V
Sbjct: 8 KITWTIKNFSFVQSQA-------IDSDIFVVGDSKWHLVAYPKGNGESTNKCLSLYLNVA 60
Query: 67 --DSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIG 124
SLP GW + L ++NQ + K++ + + F + ++ G+ + S+L D G
Sbjct: 61 DFQSLPNGWKRHIKYRLTVVNQMSEKLSEQEVIQGWFYKNFHISGFQTMLPLSKLLDKNG 120
Query: 125 GFIVN 129
GF+VN
Sbjct: 121 GFLVN 125
>AT1G31400.1 | Symbols: | TRAF-like family protein |
chr1:11245225-11246481 REVERSE LENGTH=278
Length = 278
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG------ENVDYFKIYL 64
+ TW I+NFS L S Y F + W + YP G + + F
Sbjct: 8 RITWTIKNFSSLQSHA-------IYFDIFVVGDTKWHLLAYPKGYGDSINKCLSLFLGVP 60
Query: 65 DVDSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIG 124
D D LP GW + L ++NQ + K++ + A+ F +G + +EL G
Sbjct: 61 DPDDLPSGWKRHIIYRLTVVNQMSEKLSKQEVARGGFYPRSLTFGSQVMLPLTEL---YG 117
Query: 125 GFIVNDICVIEAEITV 140
GF+V+ I AE+ V
Sbjct: 118 GFLVSGQVKIVAEVGV 133
>AT3G58220.2 | Symbols: | TRAF-like family protein |
chr3:21564677-21566435 REVERSE LENGTH=453
Length = 453
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 2 IKSPEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYF 60
I SP + ++F+W I++FS L R YS F + G W + YPMG + Y
Sbjct: 4 IGSPLGK-NEFSWVIKDFSSLGVRA-------IYSDEFVIGGCKWRLIAYPMGNRIKKYM 55
Query: 61 KIYLDV-DS--LPRGWGEFADFTLALINQTNHKMT-IRYEAKHDFTEAGYLYGYSKFITF 116
+Y++V DS LP GW + + ++N +K + +Y F + +GY I
Sbjct: 56 SLYVEVADSKHLPSGWSINTELRMEVVNHNLYKPSQQKYRKNLWFDQKTPSWGYKTMIRH 115
Query: 117 SELRDPIGGFIVNDICVI 134
S+L G + ++ ++
Sbjct: 116 SKLSGEEGFLVSGEVTIV 133
>AT4G09780.1 | Symbols: | TRAF-like family protein |
chr4:6159538-6161378 REVERSE LENGTH=427
Length = 427
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 35/160 (21%)
Query: 9 VDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGE-NVDYFKIYLD-V 66
+KFTWKI +FSKL KK YS F + W I I P G+ V +Y+ +
Sbjct: 212 TNKFTWKISDFSKLGD------KKYHYSDEFVVGERKWRIKISPKGDKKVRALSVYVQAM 265
Query: 67 DSLPRGWGE--FADFTLALINQTNHKMTIRYEAKHDFTEAGYL--------------YGY 110
+ LP +A L L+NQ N T E + + + +L YG
Sbjct: 266 EYLPNAVASTTYAKLKLQLMNQKN---TNHIEKRGTYQTSFFLYLVFHFFSREKEDGYGT 322
Query: 111 SKFITFSELRDPIGGFIVND--------ICVIEAEITVCN 142
S+ I+ +L D G++V D +CV E ++ +C+
Sbjct: 323 SELISVEDLNDESKGYLVEDTIVLETTLLCVTETKVKLCD 362
>AT3G58240.1 | Symbols: | TRAF-like superfamily protein |
chr3:21568530-21569827 REVERSE LENGTH=317
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 10 DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYFKIY----LD 65
+KFTW I+NF + + YS F + G+ W I Y + F +D
Sbjct: 7 NKFTWVIKNFCSVSPKP-------IYSDQFLIGGNKWHILAYSKKRDGHQFLCLDLELVD 59
Query: 66 VDSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
+ LP W + + ++N + K++ + KH F + G S F SEL D G
Sbjct: 60 CEFLPSEWRKVVKVSFTVVNFFSKKLSRQIGLKHCFNKKERSKGGSLF-HLSELTDKKSG 118
Query: 126 FIVNDICVIEAEITVCNSE 144
F+V+ I A+ITV ++
Sbjct: 119 FLVDGEVEIVAQITVLETD 137
>AT3G58220.1 | Symbols: | TRAF-like family protein |
chr3:21565173-21566435 REVERSE LENGTH=351
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 2 IKSPEARVDKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENV-DYF 60
I SP + ++F+W I++FS L R YS F + G W + YPMG + Y
Sbjct: 4 IGSPLGK-NEFSWVIKDFSSLGVRA-------IYSDEFVIGGCKWRLIAYPMGNRIKKYM 55
Query: 61 KIYLDV-DS--LPRGWGEFADFTLALINQTNHKMT-IRYEAKHDFTEAGYLYGYSKFITF 116
+Y++V DS LP GW + + ++N +K + +Y F + +GY I
Sbjct: 56 SLYVEVADSKHLPSGWSINTELRMEVVNHNLYKPSQQKYRKNLWFDQKTPSWGYKTMIRH 115
Query: 117 SELRDPIGGFIVNDICVI 134
S+L G + ++ ++
Sbjct: 116 SKLSGEEGFLVSGEVTIV 133
>AT3G58200.1 | Symbols: | TRAF-like family protein |
chr3:21560086-21561358 REVERSE LENGTH=319
Length = 319
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 10 DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG----ENVDYFKIYLD 65
+KF W I+NFS L S +S F + W + YP G F + D
Sbjct: 7 NKFRWVIKNFSSLGSER-------VFSDIFVVGSCKWRLMAYPKGVRDNRCFSLFLVVTD 59
Query: 66 VDSLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
+LP W L ++NQ + +++I E + F + +G+ + +EL+ GG
Sbjct: 60 FKTLPCDWKRHTRLRLNVVNQLSEELSILKETQMWFDQKTPAWGFLAMLPLTELKAENGG 119
Query: 126 FI 127
F+
Sbjct: 120 FL 121
>AT3G58290.3 | Symbols: | TRAF-like superfamily protein |
chr3:21580572-21581861 REVERSE LENGTH=264
Length = 264
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 46/273 (16%)
Query: 11 KFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVDYF---------- 60
KF W I+NFS SL + + S + W + YP G N D+
Sbjct: 11 KFVWVIKNFS------SLQLQDCYVSDPVLIHDVNWRLFAYPEGSNGDHLLFKKNNGDHL 64
Query: 61 KIYLDVD--SLPRGWGEFADFTLALINQTNHKMTIRYEAKHDFTEAGYLYGYSKFITFSE 118
+YL+VD SLP GW ++ F ++NQ + +++ E+G + +
Sbjct: 65 SLYLEVDFESLPCGWRQYTQFRFTVVNQISEHSSVKRVEMLQKDESGLI---------RK 115
Query: 119 LRDPIGGFIVNDICVIEAEITVCNSEEHDQSQLNNSLPEQISSSSQRDLVDFKGLVK--- 175
LR+ G IV ++ EA T + D S+ SSS+ D D +VK
Sbjct: 116 LRN--GLMIVAEVETFEAVSTSQVAAVRDDSEWT---LLGYYSSSEEDKDDVTVVVKGFH 170
Query: 176 IEKAFVPLLEEVCSWHPSLVE--FLKKRSRTHMFNEWAFTALGRVLHFLK--NKKVKDMN 231
+ + V ++E+ HP L LK ++ +++ +G +L +K +K K++
Sbjct: 171 VLDSQVNQVKEIFEKHPDLATNLVLKNQNLKNVY-------MGFLLDLIKTLSKLPKELT 223
Query: 232 DDACNHLQILWEELEAFRFDLSWLKPHVQFALD 264
++ N +L F L WL+ + AL+
Sbjct: 224 EEDLNFADSTLSDLTNAGFMLDWLRLKLNRALE 256
>AT2G42470.1 | Symbols: | TRAF-like family protein |
chr2:17679887-17685187 REVERSE LENGTH=898
Length = 898
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 132/328 (40%), Gaps = 39/328 (11%)
Query: 12 FTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGENVD-YFKIYLDVD--- 67
T + NFS+ S + S F G W+I YP G D Y ++L D
Sbjct: 492 LTLTVTNFSQKSSPIN--------SPPFPSGGCNWYIKFYPKGSADDNYLSLFLSPDDPK 543
Query: 68 SLPRGWGEFADFTLALINQTNHKMTIRYEAKHD-FTEAGYLYGYSKFITFSELRDPIGGF 126
SL W A+F L+NQ+ ++ E F + +G+ + + +L D I F
Sbjct: 544 SLGLNWKRRANFYFVLLNQSGKELHRTPEIGDQWFCDDSLSWGFPQTLPRKKLLDKI--F 601
Query: 127 IVNDICVIEAEITVCNSEEH--------DQSQLNNSLPEQISSSSQRDLVDFKGLVKIEK 178
+ ND IE I V E L +SL + S+++ VD G K+
Sbjct: 602 LDNDRFNIEIYIKVIEVVEGYHMFPASFTNKLLRSSL--EYPDKSEKETVDINGF-KVLS 658
Query: 179 AFVPLLEEVCSWHPSLVEFLKKRSRTHMFNEWAFTALGRVLHFLKNKKVKDMNDDACNHL 238
+ V ++ + HP + E RS+ + + L RV+ + K + +++ +++
Sbjct: 659 SQVTSVKRIFEEHPDIAEDF--RSKNQVVKTEYMSVLLRVIETMA-KPPQSISETELSNV 715
Query: 239 QILWEELEAFRFDLSWLKPHV-QFALDIKSYHERAVHVKKLRKNVDILEANLKIARRELV 297
EL F L WLK + + + K + +++L ++V LE + + E+
Sbjct: 716 HSELTELTEVGFKLEWLKAKLEEVCVAFKKANADGCRIQQLEEHVKNLEQTVSDLKVEMD 775
Query: 298 KAEEGFEER---------DLNAELGYGK 316
K + + DL ELG K
Sbjct: 776 KEKAKSTAKVLSLEDTLSDLKTELGKEK 803
>AT5G26320.1 | Symbols: | TRAF-like family protein |
chr5:9238310-9241236 FORWARD LENGTH=352
Length = 352
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 15/143 (10%)
Query: 16 IENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMG---------ENVDYFKIYLDV 66
I +FS + R+ + F S F G+ W ++ G EN+ + +
Sbjct: 66 ITSFSVIKGRS-----EAFESSTFEAAGYKWRFMLFVNGNQNDPDGGHENMALYVGIKET 120
Query: 67 DSLPRGWGEFADFTLALINQTNHK-MTIRYEAKHDFTEAGYLYGYSKFITFSELRDPIGG 125
+S PRGW D L + N+ HK +T+ + A +G+ I + L DP G
Sbjct: 121 ESFPRGWEVNVDLKLFVHNEKLHKYLTVSDGTVKRYEAAKTYWGFGNLIPRTTLLDPNEG 180
Query: 126 FIVNDICVIEAEITVCNSEEHDQ 148
+I++D AEI++ N E +
Sbjct: 181 YILHDTLSFGAEISIVNPAEKQE 203
>AT4G09770.2 | Symbols: | TRAF-like family protein |
chr4:6154534-6155859 REVERSE LENGTH=297
Length = 297
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 10 DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGEN-VDYFKIYLDVDS 68
+KFTWKI +FS + K+ +YS F + W + I P G+ V +Y+ +
Sbjct: 159 NKFTWKISHFSYIGD------KRYYYSDEFVVGDRKWRLKISPKGDKKVRALSVYVQAMA 212
Query: 69 -LPRGWGE--FADFTLALINQTNHKMTIRYEAKHDFT-EAGYLYGYSKFITFSELRDPIG 124
LP +A L L+NQ N I H ++ E G G S+ I+ +L D
Sbjct: 213 YLPNAVASSTYAKLRLRLLNQKNSNH-IEKRVFHFYSRENGDGSGISELISVEDLNDESK 271
Query: 125 GFIVNDICVIEAEI 138
G++V D V+E +
Sbjct: 272 GYLVEDSIVLETTL 285
>AT4G09770.1 | Symbols: | TRAF-like family protein |
chr4:6154534-6155859 REVERSE LENGTH=297
Length = 297
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 10 DKFTWKIENFSKLDSRTSLNFKKLFYSQNFFLCGHPWWICIYPMGEN-VDYFKIYLDVDS 68
+KFTWKI +FS + K+ +YS F + W + I P G+ V +Y+ +
Sbjct: 159 NKFTWKISHFSYIGD------KRYYYSDEFVVGDRKWRLKISPKGDKKVRALSVYVQAMA 212
Query: 69 -LPRGWGE--FADFTLALINQTNHKMTIRYEAKHDFT-EAGYLYGYSKFITFSELRDPIG 124
LP +A L L+NQ N I H ++ E G G S+ I+ +L D
Sbjct: 213 YLPNAVASSTYAKLRLRLLNQKNSNH-IEKRVFHFYSRENGDGSGISELISVEDLNDESK 271
Query: 125 GFIVNDICVIEAEI 138
G++V D V+E +
Sbjct: 272 GYLVEDSIVLETTL 285