Miyakogusa Predicted Gene
- Lj0g3v0321809.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0321809.1 Non Chatacterized Hit- tr|A2WQI0|A2WQI0_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,23.55,1e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide repeat; no
des,CUFF.21818.1
(419 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 517 e-147
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 6e-66
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 189 3e-48
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 8e-48
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 9e-47
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 6e-44
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 4e-43
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 2e-41
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 3e-38
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 3e-38
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 144 1e-34
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 5e-34
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 141 9e-34
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 3e-33
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 5e-33
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 2e-32
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 3e-32
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 3e-32
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 3e-32
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 136 3e-32
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 135 7e-32
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 132 3e-31
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 4e-31
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 6e-31
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 8e-31
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 7e-30
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 7e-30
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 9e-30
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 126 3e-29
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 5e-29
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 5e-29
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 125 5e-29
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 6e-29
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 6e-29
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 8e-29
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 124 8e-29
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 9e-29
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 3e-28
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 3e-28
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 3e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 122 4e-28
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 4e-28
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 9e-28
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 1e-27
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 2e-27
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 2e-27
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 4e-26
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 6e-26
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 2e-25
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 2e-25
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 112 4e-25
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 109 4e-24
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 1e-23
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 105 6e-23
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 103 2e-22
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 102 6e-22
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 9e-22
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 101 1e-21
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 2e-21
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 99 7e-21
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 97 2e-20
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 8e-20
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 8e-20
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 94 2e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 5e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 90 4e-18
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 88 1e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 86 5e-17
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 85 1e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 81 2e-15
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 77 2e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 77 3e-14
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 77 3e-14
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 6e-14
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 73 4e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 5e-13
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 70 4e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 69 6e-12
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 69 8e-12
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 66 4e-11
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-11
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 66 4e-11
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-11
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 66 6e-11
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 65 7e-11
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 64 1e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 62 1e-09
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 60 3e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 4e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 59 8e-09
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 57 2e-08
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 57 2e-08
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 2e-08
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 2e-08
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 57 2e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 57 3e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 57 3e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 8e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 55 9e-08
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 54 2e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 54 2e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 54 2e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 54 3e-07
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT5G14350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 53 4e-07
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 53 4e-07
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 53 4e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 52 8e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 52 1e-06
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 52 1e-06
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 51 2e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 51 2e-06
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 50 3e-06
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 5e-06
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 517 bits (1331), Expect = e-147, Method: Compositional matrix adjust.
Identities = 245/409 (59%), Positives = 319/409 (77%), Gaps = 7/409 (1%)
Query: 14 KNLTSVVCPLFQ--HKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSL 71
+ ++S+V L+Q Q+ F +L + +P PDLV+EISRV+SDHR+P DLE +L
Sbjct: 4 RTVSSLVRALYQTPKSQSFRIFSTL----LHDPPSPDLVNEISRVLSDHRNPKDDLEHTL 59
Query: 72 NQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFA 131
+S ++SS+LVEQVLKRCKNLGF AHRFFLWA+ IP F HS+ES+HILVEILGS KQFA
Sbjct: 60 VAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFA 119
Query: 132 ILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDML 191
+LWDFL E RE + EI+S +FW +F+AYSRANLP A R+F RM EFGIKP + D D L
Sbjct: 120 LLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQL 179
Query: 192 LYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGC 250
L+ LC +KHV AQ+FF +AK ++ +AKTYSIL+ GW +I D+ AR++F ML++ C
Sbjct: 180 LHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNC 239
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
VDLLAYN LDALCK G VD +F +M + ++PDA++++IFIH YCDA D+HSA++
Sbjct: 240 VVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYK 299
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
VLD+M+R +L+PNV+T+N IIK LCKN+KV++AY LLDEMI +G PDTW+YN+I A+HC
Sbjct: 300 VLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHC 359
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
DHCEV+RA +L+SRM++ C PDRHTYNMVLKLLIRIGRFD+ATE+WE
Sbjct: 360 DHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG 408
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 248 bits (632), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 208/373 (55%), Gaps = 5/373 (1%)
Query: 46 LPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAK 105
+ D+ IS+V+ P L+ +L+Q ++S ++VE VL R +N G +RFF W++
Sbjct: 68 VADVAKNISKVLMSS--PQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSE 125
Query: 106 SIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANL 165
++HSV ++H+++E +Q+ ++WD + MR+ +N + F + + Y+RA
Sbjct: 126 KQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM--LNVETFCIVMRKYARAQK 183
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSIL 225
D AI +F M+++ + P + F+ LL LCK K+V++AQ+ F+ + F +KTYSIL
Sbjct: 184 VDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSIL 243
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
+ GWGK + KARE+F+ M+D GC D++ Y+ +D LCK G VDEA I M
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+P F YS+ +HTY N + A +M R + +V +N +I CK ++++ Y
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYR 363
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+L EM +GV P++ S N I H + E A + +M K C PD TY MV+K+
Sbjct: 364 VLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFC 422
Query: 406 RIGRFDKATEVWE 418
+ A +VW+
Sbjct: 423 EKKEMETADKVWK 435
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 119/260 (45%), Gaps = 7/260 (2%)
Query: 110 FQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCE--INSDIFWFIFKAYSRANLPD 167
F +++ IL+E G + EM ++ C + I I R +
Sbjct: 233 FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEAL 292
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA-QQFFDQAKSHFLLTAKTYSILI 226
G +RS MD KPT + +L++ +++A F + +S ++ LI
Sbjct: 293 GIVRS---MDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLI 349
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
+ K + + M +G + + N L L + G DEA ++F M+ K E
Sbjct: 350 GAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCE 408
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
PDA TY++ I +C+ ++ +A +V MR+ + P++ T++ +I LC+ ++A L
Sbjct: 409 PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVL 468
Query: 347 LDEMILRGVKPDTWSYNAIQ 366
L+EMI G++P ++ ++
Sbjct: 469 LEEMIEMGIRPSGVTFGRLR 488
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 188/369 (50%), Gaps = 1/369 (0%)
Query: 50 VSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPG 109
V +I R++ +H LEL+LN+ + L+ +VL RC + G +RFFLWA PG
Sbjct: 67 VEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPG 126
Query: 110 FQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGA 169
+ HS E +V IL +QF +W + EMR+++ I ++F + + ++ AN+ A
Sbjct: 127 YFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKA 186
Query: 170 IRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGW 229
+ M ++G++P + F LL LCK VK+A + F+ + F + ++ L+ GW
Sbjct: 187 VEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGW 246
Query: 230 GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDA 289
+ G +A+E+ M + G D++ + N L G + +A ++ +DM + EP+
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 290 FTYSIFIHTYCDAND-IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
Y++ I C + A RV +M R ++ TY +I CK +++ Y +LD
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366
Query: 349 EMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
+M +GV P +Y I H + L L+ +M++ C PD YN+V++L ++G
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 426
Query: 409 RFDKATEVW 417
+A +W
Sbjct: 427 EVKEAVRLW 435
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 120/301 (39%), Gaps = 42/301 (13%)
Query: 123 ILGSCKQFAILW--DFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFG 180
+ G C++ ++ + L +M+E+ E + +F + Y+ A A M + G
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGL-EPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 181 IKPTIHDFDMLLYFLCK-RKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKA 238
+P ++ + +L+ LC+ K + +A + F + + + TY+ LISG+
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGF--------- 352
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
CK G +D+ ++ DM K V P TY +
Sbjct: 353 --------------------------CKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVA 386
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
+ +++KM+R P++ YN +I+ CK +V+EA L +EM G+ P
Sbjct: 387 HEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPG 446
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF--PDRHTYNMVLKLLIRIGRFDKATEV 416
++ + + A M F P T +L L+R + + A +V
Sbjct: 447 VDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Query: 417 W 417
W
Sbjct: 507 W 507
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 182/351 (51%)
Query: 67 LELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGS 126
LEL+LN+ ++ L+E+VL RC + G +RFF+WA P + HS+E + +V+IL
Sbjct: 100 LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSK 159
Query: 127 CKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIH 186
+QF +W + EMR+ + I ++F + + ++ A++ AI M +FG +P +
Sbjct: 160 MRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEY 219
Query: 187 DFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAML 246
F LL LCK VK A + F+ + F + + ++ L+ GW ++G +A+ + M
Sbjct: 220 VFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMN 279
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
+ G D++ Y N L G + +A ++ DM + EP+A Y++ I C + +
Sbjct: 280 EAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRME 339
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
A +V +M R +V TY ++ CK K+++ Y +LD+MI +G+ P +Y I
Sbjct: 340 EAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIM 399
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
H L LM +M + PD YN+V++L ++G +A +W
Sbjct: 400 VAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLW 450
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 1/201 (0%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSH 214
+ Y+ A A M G +P + + +L+ LCK +++A + F + +
Sbjct: 293 LLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYE 352
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
TY+ L+SG+ K G K + M+ +G L Y + + A K +E
Sbjct: 353 CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECL 412
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
+ M PD Y++ I C ++ A R+ ++M L P V T+ +I L
Sbjct: 413 ELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Query: 335 CKNDKVEEAYELLDEMILRGV 355
+ EA + EM+ RG+
Sbjct: 473 ASQGCLLEASDHFKEMVTRGL 493
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 182/364 (50%), Gaps = 2/364 (0%)
Query: 56 VVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSI-PGFQHSV 114
++S H D + L+ + + +LV VLKR N G A +FF + + + H
Sbjct: 32 ILSSPNTTHQDDQFLLSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDA 91
Query: 115 ESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFL 174
SF + ++I +W + MR S + F + + Y+ A PD A++ FL
Sbjct: 92 SSFDLAIDIAARLHLHPTVWSLIHRMR-SLRIGPSPKTFAIVAERYASAGKPDKAVKLFL 150
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGD 234
M E G + F+ +L LCK K V++A + F + F + TY+++++GW I
Sbjct: 151 NMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKR 210
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
+ KA E+ + M+++G +L YN L + G + A F +M + E D TY+
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
+H + A +I A V D+M R +LP+V TYN +I+ LCK D VE A + +EM+ RG
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
+P+ +YN + E SR LM RME + C P+ TYNM+++ +KA
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 390
Query: 415 EVWE 418
++E
Sbjct: 391 GLFE 394
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 115/251 (45%), Gaps = 3/251 (1%)
Query: 116 SFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLR 175
SF+ ++++L K+ ++ +R +++ + I + A+
Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRALRGR--FSVDTVTYNVILNGWCLIKRTPKALEVLKE 220
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGD 234
M E GI P + ++ +L + ++ A +FF + K + TY+ ++ G+G G+
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
+AR +F M+ +G + YN + LCK V+ A +F +M+ + EP+ TY++
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I A + ++ +M PN TYN +I+ + +VE+A L ++M
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 355 VKPDTWSYNAI 365
P+ +YN +
Sbjct: 401 CLPNLDTYNIL 411
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 185/353 (52%), Gaps = 6/353 (1%)
Query: 67 LELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGS 126
+E LN+ S ++S L+E+VLK+ N G A F WA++ GF+H+ +++ L+E LG
Sbjct: 81 VETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGK 140
Query: 127 CKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIH 186
KQF ++W + +M+ ++ + F I + Y+RA AI +F +M+EFG K
Sbjct: 141 IKQFKLIWSLVDDMKAKKL--LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESS 198
Query: 187 DFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAM 245
DF+ +L L K ++V AQ+ FD+ K F K+Y+IL+ GWG+ + + E+ + M
Sbjct: 199 DFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREM 258
Query: 246 LDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDI 305
D+G D++AY ++A CK +EA F++M + +P + I+ +
Sbjct: 259 KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKL 318
Query: 306 HSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
+ A ++ + TYN ++ C + ++E+AY+ +DEM L+GV P+ +Y+ I
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
Query: 366 QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
H A + M +C P TY +++++ R D A ++W+
Sbjct: 379 LHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWD 428
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 141/303 (46%), Gaps = 7/303 (2%)
Query: 86 VLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSC 145
L + +N+G A + F K F+ ++S+ IL+E G + + EM++
Sbjct: 206 TLSKSRNVG-DAQKVFDKMKK-KRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGF 263
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
E + + I A+ +A + AIR F M++ KP+ H F L+ L K + A
Sbjct: 264 -EPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 322
Query: 206 QFFDQAKSH-FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
+FF+++KS F L A TY+ L+ + A + M +G + Y+ L L
Sbjct: 323 EFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHL 382
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
+ EA ++ M EP TY I + +C+ + A ++ D+M+ +LP +
Sbjct: 383 IRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM 439
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
++ +I LC +K++EA E +EM+ G++P ++ ++ D + L+ +
Sbjct: 440 HMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVK 499
Query: 385 MEK 387
M++
Sbjct: 500 MDR 502
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 184 bits (467), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 192/380 (50%), Gaps = 5/380 (1%)
Query: 41 VFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRF 100
+ + L+ + V +IS++V D +L L + + S++LV ++L R +N +A F
Sbjct: 88 ISDELVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTF 147
Query: 101 FLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAY 160
F+WA G+ SV +H ++ ILG ++F W + EMR+ S +NS + + Y
Sbjct: 148 FVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKY 207
Query: 161 SRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK 220
+ AI +F F ++ I DF LL LC+ K+V A K + AK
Sbjct: 208 CAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAK 267
Query: 221 TYSILISGW-GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
+++I+++GW IG +A ++ M + G D+++Y++ + KGG +++ +F
Sbjct: 268 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM-RRCNLLPNVFTYNCIIKRLCKND 338
M + +EPD Y+ +H A+ + A ++ M + PNV TYN +IK LCK
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
K EEA ++ DEM+ +G+ P +Y+A EV L+++M K C P TY
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETYI 444
Query: 399 MVLKLLIRIGRFDKATEVWE 418
M+++ L R FD +W+
Sbjct: 445 MLIRKLCRWRDFDNVLLLWD 464
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 139/316 (43%), Gaps = 26/316 (8%)
Query: 60 HRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHI 119
H + LE+ ++ F + +S+ L R KN+ + H F P +SF+I
Sbjct: 221 HAYKRFKLEMGIDDFQSLLSA------LCRYKNVSDAGHLIFCNKDKYP---FDAKSFNI 271
Query: 120 LVE----ILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSF 173
++ ++GS ++ +W E + D+ + + YS+ + ++ F
Sbjct: 272 VLNGWCNVIGSPREAERVW------MEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLF 325
Query: 174 LRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK--TYSILISGWGK 231
RM + I+P ++ +++ L K V +A+ + + TY+ LI K
Sbjct: 326 DRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCK 385
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
+ +A+++F ML++G + Y+ F+ L G +E + M EP T
Sbjct: 386 ARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG---EEVFELLAKMRKMGCEPTVET 442
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
Y + I C D + + D+M+ + P++ +Y +I L N K+EEAY EM
Sbjct: 443 YIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMK 502
Query: 352 LRGVKPDTWSYNAIQA 367
+G++P+ + IQ+
Sbjct: 503 DKGMRPNENVEDMIQS 518
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 182/372 (48%), Gaps = 2/372 (0%)
Query: 47 PDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKS 106
P+ V + +V+ + ++E L++ +S DL+ +VL+R ++ A RFF WA
Sbjct: 128 PEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAE 187
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
GF H +++ ++ IL +QF + L EM + + F KA++ A
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL--LTMETFTIAMKAFAAAKER 245
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILI 226
A+ F M ++ K + + LL L + K K+AQ FD+ K F TY++L+
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 305
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
+GW ++ + +A ++ M+DQG D++A+N L+ L + +A +FH M SK
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P+ +Y+I I +C + + +A D M L P+ Y C+I K++ YEL
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
L EM +G PD +YNA+ + A R+ ++M ++ P HT+NM++K
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 485
Query: 407 IGRFDKATEVWE 418
++ VWE
Sbjct: 486 ARNYEMGRAVWE 497
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Query: 162 RANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAK 220
R+ AI+ F M G P + + +++ CK+ ++ A ++FD S A
Sbjct: 345 RSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 404
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
Y+ LI+G+G EL + M ++G P D YN + + + AT I++ M
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKM 464
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ +EP T+++ + +Y A + V ++M + + P+ +Y +I+ L K
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS 524
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQA 367
EA L+EM+ +G+K YN A
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAA 551
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G Q + L+ G+ K+ +++ L EM+E + + + K + +P+
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP-DGKTYNALIKLMANQKMPEH 456
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLL--YFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILI 226
A R + +M + I+P+IH F+M++ YF+ + + +A + + K +Y++LI
Sbjct: 457 ATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAV-WEEMIKKGICPDDNSYTVLI 515
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
G G S +A + MLD+G L+ YN F +GG
Sbjct: 516 RGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 557
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 181/373 (48%), Gaps = 2/373 (0%)
Query: 47 PDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKS 106
P+ V + +V+ + ++E L++ +S DL+ +VL+R ++ A RFF WA
Sbjct: 128 PEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAE 187
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
GF H+ +++ ++ IL +QF + L EM + + F KA++ A
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL--LTMETFTIAMKAFAAAKER 245
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILI 226
A+ F M ++ K + + LL L + K K+AQ FD+ K F TY++L+
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 305
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
+GW ++ + +A ++ M+D G D++A+N L+ L + +A +FH M SK
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P+ +Y+I I +C + + +A D M L P+ Y C+I K++ YEL
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
L EM +G PD +YNA+ + R+ ++M ++ P HT+NM++K
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 485
Query: 407 IGRFDKATEVWEN 419
++ VW+
Sbjct: 486 ARNYEMGRAVWDE 498
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILIS 227
AI+ F M G P + + +++ CK+ ++ A ++FD S A Y+ LI+
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+G EL + M ++G P D YN + + + T I++ M+ +EP
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 471
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
T+++ + +Y A + V D+M + + P+ +Y +I+ L K EA L
Sbjct: 472 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 531
Query: 348 DEMILRGVKPDTWSYNAIQA 367
+EM+ +G+K YN A
Sbjct: 532 EEMLDKGMKTPLIDYNKFAA 551
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G Q + L+ G+ K+ +++ L EM+E + + + K + +P+
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP-DGKTYNALIKLMANQKMPEH 456
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLL--YFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILI 226
R + +M + I+P+IH F+M++ YF+ + + +A + + K +Y++LI
Sbjct: 457 GTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV-WDEMIKKGICPDDNSYTVLI 515
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
G G S +A + MLD+G L+ YN F +GG
Sbjct: 516 RGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 557
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 180/373 (48%), Gaps = 2/373 (0%)
Query: 47 PDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKS 106
P+ V + +V+ + ++E L++ +S DL+ +VL+R ++ A RFF WA
Sbjct: 127 PEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAE 186
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
GF H +++ ++ IL +QF + L EM + + F KA++ A
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL--LTMETFTIAMKAFAAAKER 244
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILI 226
A+ F M ++ K + + LL L + K K+AQ FD+ K F TY++L+
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 304
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
+GW ++ + +A ++ M+D G D++A+N L+ L + +A +FH M SK
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P+ +Y+I I +C + + +A D M L P+ Y C+I K++ YEL
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
L EM +G PD +YNA+ + R+ ++M ++ P HT+NM++K
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484
Query: 407 IGRFDKATEVWEN 419
++ VW+
Sbjct: 485 ARNYEMGRAVWDE 497
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILIS 227
AI+ F M G P + + +++ CK+ ++ A ++FD S A Y+ LI+
Sbjct: 351 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+G EL + M ++G P D YN + + + T I++ M+ +EP
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 470
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
T+++ + +Y A + V D+M + + P+ +Y +I+ L K EA L
Sbjct: 471 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 530
Query: 348 DEMILRGVKPDTWSYNAIQA 367
+EM+ +G+K YN A
Sbjct: 531 EEMLDKGMKTPLIDYNKFAA 550
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G Q + L+ G+ K+ +++ L EM+E + + + K + +P+
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPP-DGKTYNALIKLMANQKMPEH 455
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLL--YFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILI 226
R + +M + I+P+IH F+M++ YF+ + + +A + + K +Y++LI
Sbjct: 456 GTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV-WDEMIKKGICPDDNSYTVLI 514
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
G G S +A + MLD+G L+ YN F +GG
Sbjct: 515 RGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGG 556
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 185/365 (50%), Gaps = 11/365 (3%)
Query: 62 HPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILV 121
+ + D+E +L++ S +++ +V ++L+R + +A RFF WA + H +++ ++
Sbjct: 107 NAYDDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMI 166
Query: 122 EILGSCK----QFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMD 177
+IL S K QF I+ D L M+ ++ + D+ I + Y L ++ F +
Sbjct: 167 DILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTH--VQKFAKRK 224
Query: 178 EFGIK--PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDS 235
+K P I+ F+MLL LCK VK+ + + + A T+++L GW ++ D
Sbjct: 225 RIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDP 284
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE---PDAFTY 292
KA +L + M++ G + Y +D C+ G VDEA ++F M++K P A T+
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
++ I + F ++ +M LP+V TY +I+ +C +KV+EAY+ LDEM
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
+G PD +YN C++ + AL+L RM + C P TYNM++ + + D
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 464
Query: 413 ATEVW 417
A W
Sbjct: 465 AFNTW 469
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 147/366 (40%), Gaps = 20/366 (5%)
Query: 17 TSVVCPLFQHKQ------------NCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPH 64
T VVC + Q Q H H P +N ++ D++S R
Sbjct: 125 TPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMI-DILSSTKYKNKQFRIVI 183
Query: 65 HDLE-LSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEI 123
L+ + N + + L+E + K C+ +F + Q + +F++L++
Sbjct: 184 DMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDA 243
Query: 124 LGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKP 183
L C L MR + +++ F +F + R P A++ M E G KP
Sbjct: 244 LCKCGLVKEGEALLRRMRHR--VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKP 301
Query: 184 TIHDFDMLLYFLCKRKHVKQAQQFFD----QAKSHFLLTAKTYSILISGWGKIGDSGKAR 239
+ + C+ V +A FD + + TAKT++++I K + +
Sbjct: 302 ENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECF 361
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
EL M+ GC D+ Y + ++ +C VDEA +M +K PD TY+ F+
Sbjct: 362 ELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVL 421
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
C+ A ++ +M P+V TYN +I + D + A+ EM R D
Sbjct: 422 CENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDV 481
Query: 360 WSYNAI 365
+Y A+
Sbjct: 482 ETYCAM 487
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 201/393 (51%), Gaps = 23/393 (5%)
Query: 35 SLPTPQVFNPLLPDLVSEISRVVSDH--RHPH-------------HDLELSLNQF-SAQI 78
S+P + P V + ++ DH ++P H L L +Q ++Q+
Sbjct: 50 SVPISPLLTPEDTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIETSQV 109
Query: 79 SSDLVEQVLKRCKNL--GFSAHR---FFLWAKSIPGFQH-SVESFHILVEILGSCKQFAI 132
S +V V+++C ++ G H+ FF WA S + H S ++ ++++ G +QF +
Sbjct: 110 SPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDL 169
Query: 133 LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLL 192
W L ++ +S EI+ + F + + Y RA L A+ F RM+++G P F +++
Sbjct: 170 AW-HLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVI 228
Query: 193 YFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPV 252
L +++ +AQ FFD K F Y+ L+ GW + G+ +A ++F+ M G
Sbjct: 229 SNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEP 288
Query: 253 DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
++ Y+ +DALC+ G + A ++F DML P+A T++ + + A +V
Sbjct: 289 NVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVY 348
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
++M++ P+ TYN +I+ C+++ +E A ++L+ MI + + + ++N I +
Sbjct: 349 NQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKK 408
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+V+ A R+ S+M + C P+ TYN+++++ +
Sbjct: 409 RDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFV 441
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 117/232 (50%), Gaps = 2/232 (0%)
Query: 186 HDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQA 244
H ++ ++ K + A D KS + ++ +T++ILI + + G + +A F
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNR 211
Query: 245 MLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAND 304
M D GC D +A++ + L + EA + F D L R EPD Y+ + +C A +
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF-DSLKDRFEPDVIVYTNLVRGWCRAGE 270
Query: 305 IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNA 364
I A +V +M+ + PNV+TY+ +I LC+ ++ A+++ +M+ G P+ ++N
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 365 IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ H + L++ ++M+K C PD TYN +++ R + A +V
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKV 382
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 171/354 (48%), Gaps = 5/354 (1%)
Query: 67 LELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGS 126
++ SL+ +S D+V VL R G + FF WA PG V S+ +++ LG
Sbjct: 104 IQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGR 163
Query: 127 CKQFAILWDFLTEMRESSCCEINSDI--FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPT 184
K F+ + D L M C +N D+ ++ R + AI F + FG+K +
Sbjct: 164 RKLFSFMMDVLKGM---VCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCS 220
Query: 185 IHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQA 244
F+ LL LC+R HV A+ F+ K + + +Y+I+ISGW K+G+ + ++ +
Sbjct: 221 TESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKE 280
Query: 245 MLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAND 304
M++ G D L+Y++ ++ L + G ++++ IF ++ K PDA Y+ I + A D
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 305 IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNA 364
+ R +M PN+ TY+ ++ L K KV +A E+ +EM+ RGV P T +
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTS 400
Query: 365 IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
C + A+ + + K C Y ++LK L R G+ VW+
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWD 454
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 1/183 (0%)
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
CE N + + + + A+ F M G+ PT L LC A
Sbjct: 356 CEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAM 415
Query: 206 QFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
+ ++ K+ ++ Y +L+ + G G ++ M + G P D+ Y +D L
Sbjct: 416 VIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGL 475
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
C G ++ A + + + K P+ F YS +N A+++ K+++ N
Sbjct: 476 CIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENA 535
Query: 325 FTY 327
++
Sbjct: 536 RSF 538
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 170/327 (51%), Gaps = 8/327 (2%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
A FF W + GF+H+ E+F+ +++ILG +F I W + M ++ N F +
Sbjct: 64 ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIV 123
Query: 157 FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF-FDQ---AK 212
FK Y A+L AI ++ ++D+F ++ F L+ LC+ KHV +A++ F +
Sbjct: 124 FKRYVTAHLVQEAIDAYDKLDDFNLRDETS-FYNLVDALCEHKHVVEAEELCFGKNVIGN 182
Query: 213 SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
+ K +++++ GW K+G GK +E ++ M +G DL +Y+ ++D +CK G +
Sbjct: 183 GFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWK 242
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
A ++ +M S+R++ D Y+ I + + RV +MR PNV T+N IIK
Sbjct: 243 AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIK 302
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP 392
LC++ ++ +AY +LDEM RG +PD+ +Y + + E+ L L RM + P
Sbjct: 303 LLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFGRMIRSGVRP 359
Query: 393 DRHTYNMVLKLLIRIGRFDKATEVWEN 419
TY M+++ R G VW+
Sbjct: 360 KMDTYVMLMRKFERWGFLQPVLYVWKT 386
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 93/242 (38%), Gaps = 33/242 (13%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
N+ I I + +S+ + +MD G+ + + + + +CK +A + +
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 209 DQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
+ KS + L Y+ +I G +F+ M ++GC ++ +N + LC+
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR----------------- 310
G + +A + +M + +PD+ TY ++I S F
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVML 367
Query: 311 ---------------VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
V M+ P+ YN +I L + ++ A E +EMI RG+
Sbjct: 368 MRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
Query: 356 KP 357
P
Sbjct: 428 SP 429
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 173/343 (50%), Gaps = 5/343 (1%)
Query: 64 HHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEI 123
H D+ L++ ++ LV QVL+R N A+ FF+WA S G+ HS +++ +V++
Sbjct: 116 HEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDV 175
Query: 124 LGSCKQFAILWDFLTEMRESSCCE-INSDIFWFIFKAYSRANLPDGAIRSFLRMDE-FGI 181
LG C+ F ++W+ + EM ++ + + D + + +++ + A+ +FL M++ +G+
Sbjct: 176 LGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGV 235
Query: 182 KPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKAREL 241
K + L+ L K ++ A + F + A+T++ILI G+ K AR +
Sbjct: 236 KTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAM 295
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
M D++ Y +F++A CK G + +M P+ TY+I +H+
Sbjct: 296 MDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGK 355
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
+ + A V +KM+ +P+ Y+ +I L K + ++A E+ ++M +GV+ D
Sbjct: 356 SKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLV 415
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEK---DNCFPDRHTYNMVL 401
YN + + H ALRL+ RME ++C P+ TY +L
Sbjct: 416 YNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 2/205 (0%)
Query: 216 LLTAKTYSILISGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEAT 274
L+T T S ++ K G KA + F M G D +A N+ +DAL K ++ A
Sbjct: 200 LVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAH 259
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
+F + ++PDA T++I IH +C A A ++D M+ P+V TY ++
Sbjct: 260 EVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAY 318
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
CK E+L+EM G P+ +Y + +V+ AL + +M++D C PD
Sbjct: 319 CKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDA 378
Query: 395 HTYNMVLKLLIRIGRFDKATEVWEN 419
Y+ ++ +L + GRF A E++E+
Sbjct: 379 KFYSSLIHILSKTGRFKDAAEIFED 403
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 166/351 (47%), Gaps = 10/351 (2%)
Query: 75 SAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILW 134
S IS V Q L+ K + RFF W S GF H +SF +++E LG + +
Sbjct: 63 SQTISRTTVLQTLRLIK-VPADGLRFFDWV-SNKGFSHKEQSFFLMLEFLGRARNLNVAR 120
Query: 135 DFL--TEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLL 192
+FL E R + C ++ F + ++Y A L +++ F M + GI P++ F+ LL
Sbjct: 121 NFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLL 180
Query: 193 YFLCKRKHVKQAQQFFDQAKSHFLLTAKTYS--ILISGWGKIGDSGKARELFQAMLDQGC 250
L KR A FD+ + + +T +Y+ LI+G+ K +A +F+ M C
Sbjct: 181 SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHC 240
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR--VEPDAFTYSIFIHTYCDANDIHSA 308
D++ YN +D LC+ G V A N+ ML K V P+ +Y+ + YC +I A
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEA 300
Query: 309 FRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL--DEMILRGVKPDTWSYNAIQ 366
V M L PN TYN +IK L + + +E ++L PD ++N +
Sbjct: 301 VLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILI 360
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
HCD + A+++ M PD +Y+++++ L FD+A ++
Sbjct: 361 KAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLF 411
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 110/259 (42%), Gaps = 10/259 (3%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRES-SCCEINSDIFWFIFKAYSRANLPD 167
G + + +++ L++ L ++ + D L ++ + ++ F + KA+ A D
Sbjct: 311 GLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLD 370
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK------- 220
A++ F M + P + +L+ LC R +A+ F++ +L K
Sbjct: 371 AAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLA 430
Query: 221 -TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
Y+ + G + +A ++F+ ++ +G D +Y + C+ G A +
Sbjct: 431 AAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVL 489
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
ML + PD TY + I + A L +M R + LP T++ ++ L K
Sbjct: 490 MLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKF 549
Query: 340 VEEAYELLDEMILRGVKPD 358
E++ L+ M+ + ++ +
Sbjct: 550 ANESFCLVTLMLEKRIRQN 568
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 166/333 (49%), Gaps = 4/333 (1%)
Query: 78 ISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFL 137
+S LV ++L R ++ SA WA+S G +HS +++ + V+ILG K++ + +F+
Sbjct: 85 LSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFV 144
Query: 138 TEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCK 197
MR +N+ I + ++ A + A+ F R+ EFG++ ++LL LCK
Sbjct: 145 ERMRGDKLVTLNT--VAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 198 RKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
K V+QA+ Q KSH A T++I I GW K +A Q M G +++Y
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISY 262
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
+ C+ + + +M + P++ TY+ + + + A RV +M+R
Sbjct: 263 TTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKR 322
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLD-EMILRGVKPDTWSYNAIQAHHCDHCEVS 376
P+ YNC+I L + ++EEA + EM GV +T +YN++ A +C H E
Sbjct: 323 SGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEED 382
Query: 377 RALRLMSRMEKDN-CFPDRHTYNMVLKLLIRIG 408
+A+ L+ ME N C PD HTY +L+ + G
Sbjct: 383 KAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 17/271 (6%)
Query: 162 RANLPDGAI-----------RSFLRMDEF-----GIKPTIHDFDMLLYFLCKRKHVKQAQ 205
R NL DG + RS L + ++ G K + +DM + L K K + +
Sbjct: 82 RVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMK 141
Query: 206 QFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
+F ++ + L+T T + ++ + G+ +A +F + + G + + N LD LC
Sbjct: 142 EFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC 201
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVF 325
K V++A + + S + P+A T++IFIH +C AN + A + +M+ P V
Sbjct: 202 KEKRVEQARVVLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 260
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
+Y II+ C+ + + YE+L EM G P++ +Y I + E ALR+ +RM
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 386 EKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
++ C PD YN ++ L R GR ++A V
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 11/254 (4%)
Query: 109 GFQHSVESFHILVEILGSCKQFAIL--WDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
GF+ V S+ ++ C+QF + ++ L+EM E++ NS + I + +
Sbjct: 254 GFRPCVISYTTIIRCY--CQQFEFIKVYEMLSEM-EANGSPPNSITYTTIMSSLNAQKEF 310
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF--DQAKSHFLLTAKTYSI 224
+ A+R RM G KP ++ L++ L + +++A++ F + + + TY+
Sbjct: 311 EEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNS 370
Query: 225 LISGWGKIGDSGKARELFQAMLDQG-CPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
+I+ + + KA EL + M C D+ Y L + K G V E + +M++K
Sbjct: 371 MIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Query: 284 R-VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEE 342
+ D TY+ I C AN A+ + ++M ++ P T +++ + K + E
Sbjct: 431 HHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHES 490
Query: 343 AYELLDEMILRGVK 356
A + E I++ VK
Sbjct: 491 AERI--EHIMKTVK 502
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 166/333 (49%), Gaps = 4/333 (1%)
Query: 78 ISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFL 137
+S LV ++L R ++ SA WA+S G +HS +++ + V+ILG K++ + +F+
Sbjct: 85 LSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFV 144
Query: 138 TEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCK 197
MR +N+ I + ++ A + A+ F R+ EFG++ ++LL LCK
Sbjct: 145 ERMRGDKLVTLNT--VAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 198 RKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
K V+QA+ Q KSH A T++I I GW K +A Q M G +++Y
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISY 262
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
+ C+ + + +M + P++ TY+ + + + A RV +M+R
Sbjct: 263 TTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKR 322
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLD-EMILRGVKPDTWSYNAIQAHHCDHCEVS 376
P+ YNC+I L + ++EEA + EM GV +T +YN++ A +C H E
Sbjct: 323 SGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEED 382
Query: 377 RALRLMSRMEKDN-CFPDRHTYNMVLKLLIRIG 408
+A+ L+ ME N C PD HTY +L+ + G
Sbjct: 383 KAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 17/271 (6%)
Query: 162 RANLPDGAI-----------RSFLRMDEF-----GIKPTIHDFDMLLYFLCKRKHVKQAQ 205
R NL DG + RS L + ++ G K + +DM + L K K + +
Sbjct: 82 RVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMK 141
Query: 206 QFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
+F ++ + L+T T + ++ + G+ +A +F + + G + + N LD LC
Sbjct: 142 EFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLC 201
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVF 325
K V++A + + S + P+A T++IFIH +C AN + A + +M+ P V
Sbjct: 202 KEKRVEQARVVLLQLKS-HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 260
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
+Y II+ C+ + + YE+L EM G P++ +Y I + E ALR+ +RM
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 386 EKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
++ C PD YN ++ L R GR ++A V
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 11/254 (4%)
Query: 109 GFQHSVESFHILVEILGSCKQFAIL--WDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
GF+ V S+ ++ C+QF + ++ L+EM E++ NS + I + +
Sbjct: 254 GFRPCVISYTTIIRCY--CQQFEFIKVYEMLSEM-EANGSPPNSITYTTIMSSLNAQKEF 310
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF--DQAKSHFLLTAKTYSI 224
+ A+R RM G KP ++ L++ L + +++A++ F + + + TY+
Sbjct: 311 EEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNS 370
Query: 225 LISGWGKIGDSGKARELFQAMLDQG-CPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
+I+ + + KA EL + M C D+ Y L + K G V E + +M++K
Sbjct: 371 MIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Query: 284 R-VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEE 342
+ D TY+ I C AN A+ + ++M ++ P T +++ + K + E
Sbjct: 431 HHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHES 490
Query: 343 AYELLDEMILRGVK 356
A + E I++ VK
Sbjct: 491 AERI--EHIMKTVK 502
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 147/308 (47%), Gaps = 3/308 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G+ H SF +V L S +F D + M+ +C ++ DI I + Y R + P
Sbjct: 46 GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCV-VSEDILLSICRGYGRVHRPFD 104
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILIS 227
++R F +M +F P+ + +L L + + A +F+ + L T + ++LI
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 228 GWGKI-GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
+ G ++F M +GC D Y + LC+ G +DEA +F +M+ K
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P TY+ I+ C + ++ A R L++M+ + PNVFTY+ ++ LCK+ + +A EL
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
+ M+ RG +P+ +Y + C ++ A+ L+ RM PD Y V+
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 407 IGRFDKAT 414
I +F +A
Sbjct: 345 ISKFREAA 352
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 49/327 (14%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAIL---WDFLTEMRESSCCEINSDIF 153
A +F+ + I G +V S ++L++ L C+ + EM + C + +S +
Sbjct: 140 AFKFYKNMREI-GLPPTVASLNVLIKAL--CRNDGTVDAGLKIFLEMPKRGC-DPDSYTY 195
Query: 154 WFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS 213
+ R D A + F M E PT+ + L+ LC K+V +A ++ ++ KS
Sbjct: 196 GTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKS 255
Query: 214 HFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
+ TYS L+ G K G S +A ELF+ M+ +GC +++ Y + LCK + E
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYN---- 328
A + M + ++PDA Y I +C + A LD+M + PN T+N
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK 375
Query: 329 -------------------------------------CIIKRLCKNDKVEEAYELLDEMI 351
++K LCK + ++A +L+DE++
Sbjct: 376 TSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIV 435
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRA 378
G P ++ + H D V A
Sbjct: 436 TDGCIPSKGTWKLLIGHTLDKTIVGEA 462
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 107/241 (44%), Gaps = 9/241 (3%)
Query: 185 IHD---FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILIS---GWGKIGDSGKA 238
+HD F ++ L K A+ + K + ++ IL+S G+G++ +
Sbjct: 48 VHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSE--DILLSICRGYGRVHRPFDS 105
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+F M D C AY L L + ++ A + +M + P + ++ I
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 299 YC-DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
C + + + ++ +M + P+ +TY +I LC+ +++EA +L EM+ + P
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP 225
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+Y ++ C V A+R + M+ P+ TY+ ++ L + GR +A E++
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF 285
Query: 418 E 418
E
Sbjct: 286 E 286
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 190/412 (46%), Gaps = 19/412 (4%)
Query: 20 VCPLFQHKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRH-PHHDLELSLNQFSAQI 78
V PL Q Q+ S TP N + +S IS ++ + P LE +L++ +
Sbjct: 40 VEPLIQRIQSPAVPDSTCTPPQQNTVSKTDLSTISNLLENTDVVPGSSLESALDETGIEP 99
Query: 79 SSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLT 138
S +LV + R + H F WA+ PGF S F +V L ++F I W +
Sbjct: 100 SVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVF 159
Query: 139 EMRESSCCE--INSDIFWFIFKAYSRANLPDGAIRSFLRMDEFG--IKPT------IHDF 188
+ S +++D F + + Y+RA + AIR+F EF +P +
Sbjct: 160 DRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAF----EFARSYEPVCKSATELRLL 215
Query: 189 DMLLYFLCKRKHVKQAQQFFDQ----AKSHFLLTAKTYSILISGWGKIGDSGKARELFQA 244
++LL LCK HV++A + ++ S+++ + + ++IL++GW + +A +L++
Sbjct: 216 EVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEE 275
Query: 245 MLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAND 304
M ++ Y ++ C+ V A + +M +E + ++ I +A
Sbjct: 276 MKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGR 335
Query: 305 IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNA 364
+ A ++++ C P + TYN ++K CK + A ++L M+ RGV P T +YN
Sbjct: 336 LSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNH 395
Query: 365 IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ H + + L ++ + PDR TY+++LK+L G+ A +V
Sbjct: 396 FFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQV 447
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 136/337 (40%), Gaps = 43/337 (12%)
Query: 72 NQFSAQISSDLVEQVLKRCKNLGF--SAHRFFLWAKSIPGFQHSVESFHILVEILGS-CK 128
++ S +S+D +++R G A R F +A+S S +L +L + CK
Sbjct: 165 DEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCK 224
Query: 129 QFAILWDFLTEMRESSCCEIN----SDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPT 184
+ + + R + N IF + + R+ A + + M +KPT
Sbjct: 225 EGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPT 284
Query: 185 IHDFDMLLYFLCKRKHVKQAQQFFDQAKS-----HFLL---------------------- 217
+ + L+ C+ + V+ A + ++ K +F++
Sbjct: 285 VVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMME 344
Query: 218 ---------TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
T TY+ L+ + K GD A ++ + M+ +G YN+F K
Sbjct: 345 RFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHN 404
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYN 328
+E N++ ++ PD TY + + C+ + A +V +M+ + P++ T
Sbjct: 405 KTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTT 464
Query: 329 CIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
+I LC+ + +EEA+E D + RG+ P ++ I
Sbjct: 465 MLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMI 501
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 160/324 (49%), Gaps = 3/324 (0%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
A F +A P F+HS S IL+ LG + F ++ D L + R SS + +IF ++
Sbjct: 67 AKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHR-SSGYPLTGEIFTYL 125
Query: 157 FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCK-RKHVKQAQQFFDQAKSHF 215
K Y+ A LP+ + +F +M EF P + +L L R ++++A + F ++ H
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHG 185
Query: 216 LL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
++ ++Y++L+ + D A +LF ML++ D+ +Y + C+ G V+ A
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
+ DML+K PD +Y+ +++ C + A+++L +M+ P++ YN +I
Sbjct: 246 ELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGF 305
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
C+ D+ +A ++LD+M+ G P++ SY + CD + + M P
Sbjct: 306 CREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 365
Query: 395 HTYNMVLKLLIRIGRFDKATEVWE 418
N ++K G+ ++A +V E
Sbjct: 366 SVSNCLVKGFCSFGKVEEACDVVE 389
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 213 SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK-GGCVD 271
S + LT + ++ LI + + K F ML+ N LD L G +
Sbjct: 113 SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
+A +F V P+ +Y++ + +C +D+ A+++ KM +++P+V +Y +I
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
+ C+ +V A ELLD+M+ +G PD SY + C ++ A +L+ RM+ C
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWEN 419
PD YN ++ R R A +V ++
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDD 320
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 111/268 (41%), Gaps = 3/268 (1%)
Query: 94 GFSAHRFFLWAKS-IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDI 152
G+ F L+ S + G + S+++L++ +I + +M E + D
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP-DVDS 227
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
+ + + + R +GA+ M G P + LL LC++ +++A + + K
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 213 SHFLLTAKT-YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
Y+ +I G+ + + AR++ ML GC + ++Y + LC G D
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
E +M+SK P + + +C + A V++ + + + T+ +I
Sbjct: 348 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDT 359
+C D+ E+ L++ + + DT
Sbjct: 408 PLICNEDESEKIKLFLEDAVKEEITGDT 435
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 153/326 (46%), Gaps = 7/326 (2%)
Query: 96 SAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF 155
A F WA + PGF HS ++ L L ++F ++ L EM +S + IF
Sbjct: 58 GALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVT 117
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA--KS 213
I + + RA L I + +FGIKP++ F+ +L L K + + A++FF + S
Sbjct: 118 IIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMAS 176
Query: 214 HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEA 273
TY IL+ G G +L Q M G + + YN L ALCK G V A
Sbjct: 177 GIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRA 236
Query: 274 TNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
++ +M EP+ T++I I YC+ + + +L+K +P+V T +++
Sbjct: 237 RSLMSEM----KEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEV 292
Query: 334 LCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
LC +V EA E+L+ + +G K D + N + +C ++ A R ME+ P+
Sbjct: 293 LCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPN 352
Query: 394 RHTYNMVLKLLIRIGRFDKATEVWEN 419
TYN+++ +G D A + + +
Sbjct: 353 VETYNLLIAGYCDVGMLDSALDTFND 378
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILIS 227
A+ R++ G K + + L+ C ++ AQ+FF + + +L +TY++LI+
Sbjct: 302 ALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIA 361
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML------ 281
G+ +G A + F M + +N + L GG D+ I M
Sbjct: 362 GYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVH 421
Query: 282 SKRVEP---------------DAFTY--------------SIFIHTYCDANDIHSAFRVL 312
R++P DA + S + + C+ +
Sbjct: 422 GARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAY 481
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
D+M +P++ +C+I R ++ K+EE+ EL+++M+ RG P + ++NA+ C
Sbjct: 482 DQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQ 541
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+V ++ + M + C PD +YN +L+ L G KA
Sbjct: 542 DKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKA 582
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 130/329 (39%), Gaps = 37/329 (11%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
GF V + ++E+L + + + + L E ES +++ + K Y
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVL-ERVESKGGKVDVVACNTLVKGYCALGKMRV 336
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILIS 227
A R F+ M+ G P + +++L+ C + A F+ K+ + T++ LI
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIR 396
Query: 228 GWGKIGDSGKARELFQAMLDQGC-------PVDLLAY-----NNFLDAL----------- 264
G G + ++ + M D P + + Y N + DAL
Sbjct: 397 GLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFP 456
Query: 265 ------------CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
C+ G +D+ + M+ + P IH Y I + ++
Sbjct: 457 RAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELI 516
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
+ M LP T+N +I CK DKV + +++M RG PDT SYN + C
Sbjct: 517 NDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVK 576
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
++ +A L SRM + + PD ++ ++
Sbjct: 577 GDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 131/325 (40%), Gaps = 51/325 (15%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G + S++ F+ ++++L + I +F T R+ I+ D++ + + K S N
Sbjct: 142 GIKPSLKVFNSILDVLVK-EDIDIAREFFT--RKMMASGIHGDVYTYGILMKGLSLTNRI 198
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILI 226
+ M G+ P ++ LL+ LCK V +A+ + K T++ILI
Sbjct: 199 GDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP---NDVTFNILI 255
Query: 227 SGW----------------------------GKI-------GDSGKARELFQAMLDQGCP 251
S + K+ G +A E+ + + +G
Sbjct: 256 SAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGK 315
Query: 252 VDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRV 311
VD++A N + C G + A F +M K P+ TY++ I YCD + SA
Sbjct: 316 VDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDT 375
Query: 312 LDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM----ILRGVKPDTWSYNAIQA 367
+ M+ + N T+N +I+ L + ++ ++L+ M + G + D YN +
Sbjct: 376 FNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID--PYNCVIY 433
Query: 368 HHCDHCEVSRALRLMSRMEKDNCFP 392
AL + +MEK FP
Sbjct: 434 GFYKENRWEDALEFLLKMEK--LFP 456
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 116/272 (42%), Gaps = 13/272 (4%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
A RFF+ + G+ +VE++++L+ D +M+ + N F +
Sbjct: 337 AQRFFIEMER-KGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK-TDAIRWNFATFNTL 394
Query: 157 FKAYSRANLPDGAIRSFLRMDEFGIKPTIHD-----FDMLLYFLCKRKHVKQAQQFFDQA 211
+ S D ++ M + T+H ++ ++Y K + A +F +
Sbjct: 395 IRGLSIGGRTDDGLKILEMMQD---SDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
+ F LIS K G + + M+ +G ++ + + + G ++
Sbjct: 452 EKLFPRAVDRSFKLISLCEK-GGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIE 510
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
E+ + +DM+++ P + T++ I +C + + + + ++ M +P+ +YN ++
Sbjct: 511 ESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLL 570
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPD--TWS 361
+ LC +++A+ L M+ + + PD WS
Sbjct: 571 EELCVKGDIQKAWLLFSRMVEKSIVPDPSMWS 602
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 162/348 (46%), Gaps = 8/348 (2%)
Query: 74 FSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAIL 133
F ++ S + +Q +N+ + F KS PGF H+ +++H ++ L + F +
Sbjct: 48 FPKRLVSMITQQ-----QNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPV 102
Query: 134 WDFLTEMRES-SCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLL 192
+ ++R S + ++F + + Y A + ++R FLR+ +FG+K ++ + LL
Sbjct: 103 ESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLL 162
Query: 193 YFLCKRKHVKQAQQFFDQAKSHFLLTAKTYS--ILISGWGKIGDSGKARELFQAMLDQGC 250
L + + F +K F +T ++ +L+ K D A ++ + G
Sbjct: 163 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 222
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
+L+ Y L G ++ A + +ML + PDA TY++ + YC A
Sbjct: 223 VPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAAT 282
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
V+D M + + PN TY +I+ LCK K EA + DEM+ R PD+ + C
Sbjct: 283 VMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALC 342
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ +V A L +M K+NC PD + ++ L + GR +A ++++
Sbjct: 343 EDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD 390
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 191/442 (43%), Gaps = 73/442 (16%)
Query: 22 PLFQHKQNCHH--FHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQIS 79
P F H + +H L + F+P + +++D R+ + ++ N F
Sbjct: 77 PGFTHNYDTYHSILFKLSRARAFDP--------VESLMADLRNSYPPIKCGENLFI---- 124
Query: 80 SDLVEQVLKRCKNLGF-----SAHRFFLWAKSIP--GFQHSVESFHILVEILGSCKQFAI 132
DL+ +N G S+ R FL IP G + SV S + L+ +L ++F +
Sbjct: 125 -DLL-------RNYGLAGRYESSMRIFL---RIPDFGVKRSVRSLNTLLNVLIQNQRFDL 173
Query: 133 LWDFLTEMRESSCCEINSDIFW--FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDM 190
+ +ES I +IF + KA + N + A + + G+ P + +
Sbjct: 174 VHAMFKNSKES--FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTT 231
Query: 191 LLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIG---------------- 233
+L R ++ A++ ++ + A TY++L+ G+ K+G
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE 291
Query: 234 -------------------DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
SG+AR +F ML++ D +DALC+ VDEA
Sbjct: 292 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEAC 351
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
++ ML PD S IH C + A ++ D+ + ++ P++ TYN +I +
Sbjct: 352 GLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGM 410
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
C+ ++ EA L D+M R KP+ ++YN + + V +R++ M + CFP++
Sbjct: 411 CEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNK 470
Query: 395 HTYNMVLKLLIRIGRFDKATEV 416
T+ ++ + L ++G+ + A ++
Sbjct: 471 TTFLILFEGLQKLGKEEDAMKI 492
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 38/222 (17%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA------------------------ 211
M++ I+P + +++ LCK K +A+ FD+
Sbjct: 287 MEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHK 346
Query: 212 ------------KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNN 259
K++ + S LI K G +AR+LF ++G LL YN
Sbjct: 347 VDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNT 405
Query: 260 FLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCN 319
+ +C+ G + EA ++ DM ++ +P+AFTY++ I ++ RVL++M
Sbjct: 406 LIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Query: 320 LLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG-VKPDTW 360
PN T+ + + L K K E+A +++ ++ G V ++W
Sbjct: 466 CFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESW 507
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 182/380 (47%), Gaps = 17/380 (4%)
Query: 52 EISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAH--RFFLWA-KSIP 108
E+ R+VS DLE +LNQ S SS+LV QV++ CKN RFF W+ KS+
Sbjct: 39 EVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLG 98
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
H E F+ ++ +L K + L+++R+ + ++ F + + + +
Sbjct: 99 SSLHDKE-FNYVLRVLAEKKDHTAMQILLSDLRKENRA-MDKQTFSIVAETLVKVGKEED 156
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSI---L 225
AI F +D+F ++ LC R HVK+A K +++ S+ L
Sbjct: 157 AIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKD--VISGNELSVYRSL 214
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK-------GGCVDEATNIFH 278
+ GW + +AR + Q M G DL +N+ L LC+ G V EA NI
Sbjct: 215 LFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIML 274
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
+M S +++P + +Y+I + + + ++L++M+R P+ +Y +++ L
Sbjct: 275 EMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTG 334
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
+ + +++DEMI RG +P+ Y + C V+ AL+L +M++ + Y+
Sbjct: 335 RFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYD 394
Query: 399 MVLKLLIRIGRFDKATEVWE 418
+++ L + G F+K E+WE
Sbjct: 395 LLIPKLCKGGNFEKGRELWE 414
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 8/191 (4%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL--------TAK 220
A R M GI P + F+ LL LC+R + +A + L T+
Sbjct: 227 ARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSM 286
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
+Y+IL+S G+ ++ ++ + M GC D +Y + L G + I +M
Sbjct: 287 SYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEM 346
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ + P+ Y I C ++ A ++ +KM+R ++ Y+ +I +LCK
Sbjct: 347 IERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNF 406
Query: 341 EEAYELLDEMI 351
E+ EL +E +
Sbjct: 407 EKGRELWEEAL 417
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 148/308 (48%), Gaps = 6/308 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
GFQ ++ ++ L A+ D +M E + I + + + + + +
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN---IKASVVQYSIVIDSLCKDGSF 261
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCK-RKHVKQAQQFFDQAKSHFLLTAKTYSIL 225
D A+ F M+ GIK + + L+ LC K A+ + + + T+S L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I + K G +A+EL+ M+ +G D + YN+ +D CK C+ EA +F M+SK
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
EPD TYSI I++YC A + R+ ++ L+PN TYN ++ C++ K+ A E
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
L EM+ RGV P +Y + CD+ E+++AL + +M+K YN+++ +
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 406 RIGRFDKA 413
+ D A
Sbjct: 502 NASKVDDA 509
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 167/379 (44%), Gaps = 31/379 (8%)
Query: 37 PTPQVFNPLLPDLV-SEISRVVSD--HRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNL 93
P + P+L L S S + D + +++ S+ Q+S I S CK+
Sbjct: 208 PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS--------LCKDG 259
Query: 94 GFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEM-RESSCCEINSDI 152
F + G + V ++ L+ G C WD +M RE I D+
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIG--GLCNDGK--WDDGAKMLREMIGRNIIPDV 315
Query: 153 FWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ 210
F + + + A + M GI P ++ L+ CK + +A Q FD
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD- 374
Query: 211 AKSHFLLTAK-------TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA 263
L+ +K TYSILI+ + K LF+ + +G + + YN +
Sbjct: 375 -----LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 264 LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPN 323
C+ G ++ A +F +M+S+ V P TY I + CD +++ A + +KM++ +
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 324 VFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMS 383
+ YN II +C KV++A+ L + +GVKPD +YN + C +S A L
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 384 RMEKDNCFPDRHTYNMVLK 402
+M++D C PD TYN++++
Sbjct: 550 KMKEDGCTPDDFTYNILIR 568
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 149/319 (46%), Gaps = 4/319 (1%)
Query: 101 FLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCC-EINSDIFWFIFKA 159
F + G +H + + I++ C++ +L+ F R E ++ F +
Sbjct: 92 FCKGMELNGIEHDMYTMTIMINCY--CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG 149
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLT 218
+ A+ RM E +P + L+ LC + V +A D+ + F
Sbjct: 150 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 209
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
TY +++ K G+S A +LF+ M ++ ++ Y+ +D+LCK G D+A ++F+
Sbjct: 210 EVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
+M K ++ D TYS I C+ ++L +M N++P+V T++ +I K
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
K+ EA EL +EMI RG+ PDT +YN++ C + A ++ M C PD TY+
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 399 MVLKLLIRIGRFDKATEVW 417
+++ + R D ++
Sbjct: 390 ILINSYCKAKRVDDGMRLF 408
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKA 238
G +P I + +L+ CK K V + F + S L+ TY+ L+ G+ + G A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+ELFQ M+ +G P ++ Y LD LC G +++A IF M R+ Y+I IH
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
C+A+ + A+ + + + P+V TYN +I LCK + EA L +M G PD
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
++YN + H + ++ L+ M+ D T MV+ +L
Sbjct: 560 DFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILIS 227
A+ F +M+E IK ++ + +++ LCK A F++ + + TYS LI
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G G ++ + M+ + D++ ++ +D K G + EA ++++M+++ + P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D TY+ I +C N +H A ++ D M P++ TY+ +I CK +V++ L
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
E+ +G+ P+T +YN + C +++ A L M P TY ++L L
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 408 GRFDKATEVWE 418
G +KA E++E
Sbjct: 469 GELNKALEIFE 479
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 6/174 (3%)
Query: 238 ARELFQAMLDQ---GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
A +LF++M+ P+D +N A+ + D M +E D +T +I
Sbjct: 54 AIDLFESMIQSRPLPTPID---FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I+ YC + AF VL + + P+ T++ ++ C +V EA L+D M+
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
+PD + + + C VS AL L+ RM + PD TY VL L + G
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSG 224
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 121/235 (51%), Gaps = 1/235 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKAREL 241
P ++ L+ LCK V++A + S +L T++ LI G + A EL
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F+ M +GC D YN +D+LC G +DEA N+ M TY+ I +C
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
AN A + D+M + N TYN +I LCK+ +VE+A +L+D+MI+ G KPD ++
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
YN++ H C ++ +A ++ M + C PD TY ++ L + GR + A+++
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 147/315 (46%), Gaps = 3/315 (0%)
Query: 106 SIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANL 165
S+ G + V +F++L++ L Q L +M + F + + Y
Sbjct: 181 SVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVP-DEKTFTTVMQGYIEEGD 239
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH--FLLTAKTYS 223
DGA+R +M EFG + +++++ CK V+ A F + + F T++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 224 ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
L++G K G A E+ ML +G D+ YN+ + LCK G V EA + M+++
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
P+ TY+ I T C N + A + + +LP+V T+N +I+ LC A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
EL +EM +G +PD ++YN + C ++ AL ++ +ME C TYN ++
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 404 LIRIGRFDKATEVWE 418
+ + +A E+++
Sbjct: 480 FCKANKTREAEEIFD 494
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 160/391 (40%), Gaps = 74/391 (18%)
Query: 96 SAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF 155
+A R F A P F + ++ LG F + L +M+ SS CE+ + F
Sbjct: 65 AALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK-SSRCEMGTSTFLI 123
Query: 156 IFKAYSRANLPDGAIR------------------------------------SFLRMDEF 179
+ ++Y++ L D + S +M +
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKA 238
GIKP + F++L+ LC+ ++ A + S+ L+ KT++ ++ G+ + GD A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 239 RELFQAMLDQGCP------------------------------------VDLLAYNNFLD 262
+ + M++ GC D +N ++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 263 ALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLP 322
LCK G V A I ML + +PD +TY+ I C ++ A VLD+M + P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 323 NVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLM 382
N TYN +I LCK ++VEEA EL + +G+ PD ++N++ C A+ L
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 383 SRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
M C PD TYNM++ L G+ D+A
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 2/242 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILIS 227
A+ F M G +P ++ML+ LC + + +A Q + S + TY+ LI
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ K + +A E+F M G + + YN +D LCK V++A + M+ + +P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D +TY+ + +C DI A ++ M P++ TY +I LCK +VE A +LL
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM-EKDNCFPDRHTYNMVLKLLIR 406
+ ++G+ +YN + + + A+ L M E++ PD +Y +V + L
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Query: 407 IG 408
G
Sbjct: 659 GG 660
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G V +F+ L++ L + + + EMR S CE + + + + D
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR-SKGCEPDEFTYNMLIDSLCSKGKLDE 453
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILIS 227
A+ +M+ G ++ ++ L+ CK ++A++ FD+ + H + + TY+ LI
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G K A +L M+ +G D YN+ L C+GG + +A +I M S EP
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLD--KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
D TY I C A + A ++L +M+ NL P+ YN +I+ L + K EA
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAIN 631
Query: 346 LLDEMILRG-VKPDTWSYNAIQAHHCD 371
L EM+ + PD SY + C+
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCN 658
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 1/163 (0%)
Query: 257 YNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM- 315
Y L L + G D+ I DM S R E T+ I I +Y V+D M
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 316 RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEV 375
L P+ YN ++ L + ++ +M + G+KPD ++N + C ++
Sbjct: 146 DEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQL 205
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
A+ ++ M PD T+ V++ I G D A + E
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 157/335 (46%), Gaps = 3/335 (0%)
Query: 68 ELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSC 127
E +L +I + QVLK+ + G +A FF W K PGF+H ++ +V LG
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 128 KQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHD 187
KQF + L EM C + N+ + + +Y RAN + A+ F +M E G KP
Sbjct: 378 KQFGAINKLLDEMVRDGC-QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAML 246
+ L+ K + A + + ++ L TYS++I+ GK G A +LF M+
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
DQGC +L+ YN +D K A ++ DM + EPD TYSI + +
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
A V +M++ N +P+ Y ++ K VE+A++ M+ G++P+ + N++
Sbjct: 557 EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
+ +++ A L+ M P TY ++L
Sbjct: 617 STFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TY+ ++ G+ G +L M+ GC + + YN + + + ++EA N+F+ M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+PD TY I + A + A + +M+ L P+ FTY+ II L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
A++L EM+ +G P+ +YN + H AL+L M+ PD+ TY++V
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 401 LKLLIRIGRFDKATEVW 417
+++L G ++A V+
Sbjct: 546 MEVLGHCGYLEEAEAVF 562
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 5/237 (2%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKA 238
G K H + ++ L + K + D+ + TY+ LI +G+ +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+F M + GC D + Y +D K G +D A +++ M + + PD FTYS+ I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
A + +A ++ +M PN+ TYN ++ K + A +L +M G +PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 359 TWSYNAIQA--HHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+Y+ + HC + E + A+ + M++ N PD Y +++ L + G +KA
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAV--FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 231 KIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDA 289
++ D G A F + Q G D Y + L + + +M+ +P+
Sbjct: 340 QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNT 399
Query: 290 FTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDE 349
TY+ IH+Y AN ++ A V ++M+ P+ TY +I K ++ A ++
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 350 MILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGR 409
M G+ PDT++Y+ I + A +L M C P+ TYN+++ L +
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 410 FDKATEVWEN 419
+ A +++ +
Sbjct: 520 YQNALKLYRD 529
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G ++ +++ LG EM + C N + + +++A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP-NLVTYNIMMDLHAKARNYQN 522
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILIS 227
A++ + M G +P + +++ L ++++A+ F + + +++ Y +L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
WGK G+ KA + +QAML G ++ N+ L + + EA + +ML+ + P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 288 DAFTYSIFIHTYCDA 302
TY++ + D
Sbjct: 643 SLQTYTLLLSCCTDG 657
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 157/335 (46%), Gaps = 3/335 (0%)
Query: 68 ELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSC 127
E +L +I + QVLK+ + G +A FF W K PGF+H ++ +V LG
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 128 KQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHD 187
KQF + L EM C + N+ + + +Y RAN + A+ F +M E G KP
Sbjct: 378 KQFGAINKLLDEMVRDGC-QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAML 246
+ L+ K + A + + ++ L TYS++I+ GK G A +LF M+
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
DQGC +L+ YN +D K A ++ DM + EPD TYSI + +
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
A V +M++ N +P+ Y ++ K VE+A++ M+ G++P+ + N++
Sbjct: 557 EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
+ +++ A L+ M P TY ++L
Sbjct: 617 STFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TY+ ++ G+ G +L M+ GC + + YN + + + ++EA N+F+ M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+PD TY I + A + A + +M+ L P+ FTY+ II L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
A++L EM+ +G P+ +YN + H AL+L M+ PD+ TY++V
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 401 LKLLIRIGRFDKATEVW 417
+++L G ++A V+
Sbjct: 546 MEVLGHCGYLEEAEAVF 562
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 5/237 (2%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKA 238
G K H + ++ L + K + D+ + TY+ LI +G+ +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+F M + GC D + Y +D K G +D A +++ M + + PD FTYS+ I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
A + +A ++ +M PN+ TYN ++ K + A +L +M G +PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 359 TWSYNAIQA--HHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+Y+ + HC + E + A+ + M++ N PD Y +++ L + G +KA
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAV--FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 231 KIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDA 289
++ D G A F + Q G D Y + L + + +M+ +P+
Sbjct: 340 QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNT 399
Query: 290 FTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDE 349
TY+ IH+Y AN ++ A V ++M+ P+ TY +I K ++ A ++
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 350 MILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGR 409
M G+ PDT++Y+ I + A +L M C P+ TYN+++ L +
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 410 FDKATEVWEN 419
+ A +++ +
Sbjct: 520 YQNALKLYRD 529
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G ++ +++ LG EM + C N + + +++A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP-NLVTYNIMMDLHAKARNYQN 522
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILIS 227
A++ + M G +P + +++ L ++++A+ F + + +++ Y +L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
WGK G+ KA + +QAML G ++ N+ L + + EA + +ML+ + P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 288 DAFTYSIFIHTYCDA 302
TY++ + D
Sbjct: 643 SLQTYTLLLSCCTDG 657
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 157/335 (46%), Gaps = 3/335 (0%)
Query: 68 ELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSC 127
E +L +I + QVLK+ + G +A FF W K PGF+H ++ +V LG
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 128 KQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHD 187
KQF + L EM C + N+ + + +Y RAN + A+ F +M E G KP
Sbjct: 378 KQFGAINKLLDEMVRDGC-QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVT 436
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAML 246
+ L+ K + A + + ++ L TYS++I+ GK G A +LF M+
Sbjct: 437 YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV 496
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
DQGC +L+ YN +D K A ++ DM + EPD TYSI + +
Sbjct: 497 DQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
A V +M++ N +P+ Y ++ K VE+A++ M+ G++P+ + N++
Sbjct: 557 EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
+ +++ A L+ M P TY ++L
Sbjct: 617 STFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TY+ ++ G+ G +L M+ GC + + YN + + + ++EA N+F+ M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+PD TY I + A + A + +M+ L P+ FTY+ II L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
A++L EM+ +G P+ +YN + H AL+L M+ PD+ TY++V
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 401 LKLLIRIGRFDKATEVW 417
+++L G ++A V+
Sbjct: 546 MEVLGHCGYLEEAEAVF 562
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 5/237 (2%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKA 238
G K H + ++ L + K + D+ + TY+ LI +G+ +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+F M + GC D + Y +D K G +D A +++ M + + PD FTYS+ I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
A + +A ++ +M PN+ TYN ++ K + A +L +M G +PD
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 359 TWSYNAIQA--HHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+Y+ + HC + E + A+ + M++ N PD Y +++ L + G +KA
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAV--FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 1/190 (0%)
Query: 231 KIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDA 289
++ D G A F + Q G D Y + L + + +M+ +P+
Sbjct: 340 QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNT 399
Query: 290 FTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDE 349
TY+ IH+Y AN ++ A V ++M+ P+ TY +I K ++ A ++
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 350 MILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGR 409
M G+ PDT++Y+ I + A +L M C P+ TYN+++ L +
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 410 FDKATEVWEN 419
+ A +++ +
Sbjct: 520 YQNALKLYRD 529
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G ++ +++ LG EM + C N + + +++A
Sbjct: 464 GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTP-NLVTYNIMMDLHAKARNYQN 522
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILIS 227
A++ + M G +P + +++ L ++++A+ F + + +++ Y +L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
WGK G+ KA + +QAML G ++ N+ L + + EA + +ML+ + P
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP 642
Query: 288 DAFTYSIFIHTYCDA 302
TY++ + D
Sbjct: 643 SLQTYTLLLSCCTDG 657
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 134/268 (50%), Gaps = 3/268 (1%)
Query: 152 IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA 211
I+ + + Y R + A+ M + G + ++ +L+ LCKRK + +A + F++
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 212 KSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
L + T +ILI G K+G+ A ELFQ M ++ +D++ YN LD K G +
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
D A I+ DM+SK + P +YSI ++ C + AFRV D+M N+ P V N +
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKD-- 388
IK C++ + L++MI G PD SYN + +S+A L+ +ME++
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 389 NCFPDRHTYNMVLKLLIRIGRFDKATEV 416
PD TYN +L R + +A V
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 148/317 (46%), Gaps = 6/317 (1%)
Query: 106 SIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRA 163
S G +V + +I+V L + + FL++++E + DI + + AYS
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG---VYPDIVTYNTLISAYSSK 283
Query: 164 NLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTY 222
L + A M G P ++ ++ ++ LCK ++A++ F + +S + TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 223 SILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS 282
L+ K GD + ++F M + DL+ +++ + + G +D+A F+ +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 283 KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEE 342
+ PD Y+I I YC I A + ++M + +V TYN I+ LCK + E
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 343 AYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
A +L +EM R + PD+++ + HC + A+ L +M++ D TYN +L
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 403 LLIRIGRFDKATEVWEN 419
++G D A E+W +
Sbjct: 524 GFGKVGDIDTAKEIWAD 540
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 143/334 (42%), Gaps = 23/334 (6%)
Query: 83 VEQVLKRCKNLGFSAHRFF-LWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEM- 140
V +VL RC+N RF P F+H+ S ++ IL + + L M
Sbjct: 81 VVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMI 140
Query: 141 RESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKH 200
R S + +I + +S D FD+L+ + +
Sbjct: 141 RRSGVSRL--EIVNSLDSTFSNCGSNDSV------------------FDLLIRTYVQARK 180
Query: 201 VKQAQQFFDQAKSH-FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNN 259
+++A + F +S F ++ + LI +IG A ++Q + G +++ N
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240
Query: 260 FLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCN 319
++ALCK G +++ + K V PD TY+ I Y + AF +++ M
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 320 LLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRAL 379
P V+TYN +I LCK+ K E A E+ EM+ G+ PD+ +Y ++ C +V
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 380 RLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
++ S M + PD ++ ++ L R G DKA
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 143/327 (43%), Gaps = 11/327 (3%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
AH F +S GF S+++ + L+ L + W E+ S I +
Sbjct: 184 AHEAFTLLRS-KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGV-----GINVYT 237
Query: 157 FKAYSRANLPDGA---IRSFL-RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
A DG + +FL ++ E G+ P I ++ L+ + +++A + +
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 213 SH-FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
F TY+ +I+G K G +A+E+F ML G D Y + L CK G V
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
E +F DM S+ V PD +S + + + ++ A + ++ L+P+ Y +I
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
+ C+ + A L +EM+ +G D +YN I C + A +L + M + F
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWE 418
PD +T +++ ++G A E+++
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQ 504
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 169/384 (44%), Gaps = 53/384 (13%)
Query: 50 VSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPG 109
V E +V SD R D+ L FS+ +S + R NL A +F K G
Sbjct: 356 VVETEKVFSDMRS--RDVVPDLVCFSSMMS------LFTRSGNLD-KALMYFNSVKE-AG 405
Query: 110 FQHSVESFHILVEILGSCKQ--FAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPD 167
+ IL++ G C++ ++ + EM + C ++ + I + +
Sbjct: 406 LIPDNVIYTILIQ--GYCRKGMISVAMNLRNEMLQQGCA-MDVVTYNTILHGLCKRKMLG 462
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILI 226
A + F M E + P + +L+ CK +++ A + F + K + L TY+ L+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
G+GK+GD A+E++ M+ + ++Y+ ++ALC G + EA ++ +M+SK ++
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIK 582
Query: 287 P-----------------------------------DAFTYSIFIHTYCDANDIHSAFRV 311
P D +Y+ I+ + ++ AF +
Sbjct: 583 PTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Query: 312 LDKMR--RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHH 369
+ KM + L+P+VFTYN I+ C+ ++++EA +L +MI RGV PD +Y +
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Query: 370 CDHCEVSRALRLMSRMEKDNCFPD 393
++ A R+ M + PD
Sbjct: 703 VSQDNLTEAFRIHDEMLQRGFSPD 726
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 133/272 (48%), Gaps = 7/272 (2%)
Query: 151 DIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
D+F + + + + N D A R RM P +++++ LC R + A +
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 209 DQAKS-HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
+Q S + T TY+ILI G +A +L ML +G D+ YN + +CK
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM--RRCNLLPNVF 325
G VD A + ++ K EPD +Y+I + + +++ KM +C+ PNV
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD--PNVV 334
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
TY+ +I LC++ K+EEA LL M +G+ PD +SY+ + A C + A+ + M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 386 EKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
D C PD YN VL L + G+ D+A E++
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 182 KPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARE 240
+PT+ + +L+ V +A + D+ S L TY+ +I G K G +A E
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
+ + + +GC D+++YN L AL G +E + M S++ +P+ TYSI I T C
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
I A +L M+ L P+ ++Y+ +I C+ +++ A E L+ MI G PD
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+YN + A C + + +AL + ++ + C P+ +YN + L
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 144/349 (41%), Gaps = 43/349 (12%)
Query: 110 FQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGA 169
F +++I++ L S + + L ++ S C+ + + +A D A
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL-SDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 170 IRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK----TYSIL 225
++ M G+KP + ++ ++ +CK V +A F+ ++ L + +Y+IL
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA---FEMVRNLELKGCEPDVISYNIL 304
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
+ G + +L M + C +++ Y+ + LC+ G ++EA N+ M K +
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
PDA++Y I +C + A L+ M LP++ YN ++ LCKN K ++A E
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 346 LLD-----------------------------------EMILRGVKPDTWSYNAIQAHHC 370
+ EM+ G+ PD +YN++ + C
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
V A L+ M P TYN+VL + R + A V E+
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKAREL 241
P + + +L+ LC+ +++A K L A +Y LI+ + + G A E
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
+ M+ GC D++ YN L LCK G D+A IF + P++ +Y+
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
+ D A ++ +M + P+ TYN +I LC+ V+EA+ELL +M P +
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
YN + C + A+ ++ M + C P+ TY ++++ + G +A E+
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
G+ ++ L + M+ +G D++ + + +A + ++L K +PD F Y
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAY 161
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
+ I+ +C N I A RVLD+MR + P+ TYN +I LC K++ A ++L++++
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
+P +Y + V AL+LM M PD TYN +++ + + G D+
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 413 ATEVWEN 419
A E+ N
Sbjct: 282 AFEMVRN 288
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 90/222 (40%), Gaps = 69/222 (31%)
Query: 265 CKGGCVDEATNIFHDMLSKRV----------------------------------EPDAF 290
C+ G E+ ++ M+ K +PD F
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK----------- 339
Y+ I+ +C N I A RVLD+MR + P+ TYN +I LC K
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 340 ------------------------VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEV 375
V+EA +L+DEM+ RG+KPD ++YN I C V
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
RA ++ +E C PD +YN++L+ L+ G++++ ++
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 165/352 (46%), Gaps = 6/352 (1%)
Query: 50 VSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPG 109
V EI RV+S R E +L + + Q + +LV +VL+ K G + RFF W G
Sbjct: 615 VQEICRVLSSSRDWERTQE-ALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNG 673
Query: 110 FQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGA 169
++H+ E++++ +++ G K F + EMR C I D + + Y R L + A
Sbjct: 674 YKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCL-ITQDTWAIMIMQYGRTGLTNIA 732
Query: 170 IRSFLRMDEFGIKPTIHDFDMLLYFLCKRK--HVKQAQQFF-DQAKSHFLLTAKTYSILI 226
IR+F M + G+ P+ F L+ LC++K +V++A + F + +S F+ + +
Sbjct: 733 IRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYL 792
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
++G++ A+ ++ G PV +AY+ ++ ALC+ G ++EA + +R
Sbjct: 793 GCLCEVGNTKDAKSCLDSLGKIGFPV-TVAYSIYIRALCRIGKLEEALSELASFEGERSL 851
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
D +TY +H D+ A ++ M+ P V Y +I K ++E+ E
Sbjct: 852 LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLET 911
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
+M +P +Y A+ + +V A ME+ PD TY+
Sbjct: 912 CQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYS 963
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 183/414 (44%), Gaps = 47/414 (11%)
Query: 42 FNPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFF 101
F+P+ V EI+ VV +E L + S + ++VE VLKRC + A RFF
Sbjct: 122 FSPV----VHEITSVVRGD-DVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFF 176
Query: 102 LWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDI-FWFIF-KA 159
W K GF H V ++ ++ I G + ++ + ++EM ++ C + DI W I
Sbjct: 177 NWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGC---DKDIRTWTILISV 233
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLT 218
Y +A + F +M + G + +++++ LC A +F+ + +
Sbjct: 234 YGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFG 293
Query: 219 AKTYSILISGWGK---------IGD-----------------------SGK---ARELFQ 243
+TY +L+ K I D SGK A EL +
Sbjct: 294 LRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIR 353
Query: 244 AMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAN 303
+ ++ +D + + LC+ + +A I D++ +R D+ Y I I Y N
Sbjct: 354 ELKNKEMCLDAKYFEILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGIIISGYLRQN 412
Query: 304 DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYN 363
D+ A + +++ P V TY I++ L K + E+ L +EMI G++PD+ +
Sbjct: 413 DVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAIT 472
Query: 364 AIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
A+ A H V+ A ++ S ME+ P +Y++ +K L R R+D+ +++
Sbjct: 473 AVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIF 526
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 115/247 (46%), Gaps = 11/247 (4%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINS-DIFWFIFKAYSRANLPD 167
G + ++ +L++ + ++ ++ +M CEI+ D F ++ K++ +
Sbjct: 289 GITFGLRTYKMLLDCIAKSEKVDVVQSIADDM--VRICEISEHDAFGYLLKSFCVS---- 342
Query: 168 GAIRSFLRM-DEFGIKPTIHD---FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYS 223
G I+ L + E K D F++L+ LC+ + A + D K L + Y
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYG 402
Query: 224 ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
I+ISG+ + D KA E F+ + G P + Y + L K ++ N+F++M+
Sbjct: 403 IIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIEN 462
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
+EPD+ + + + N + A++V M + P +Y+ +K LC++ + +E
Sbjct: 463 GIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEI 522
Query: 344 YELLDEM 350
++ ++M
Sbjct: 523 IKIFNQM 529
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 123/325 (37%), Gaps = 42/325 (12%)
Query: 134 WDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLR--MDEFGIKPTIHDFDML 191
W+ E E S + ++ + + A + A+ F G K ++M
Sbjct: 628 WERTQEALEKSTVQFTPEL---VVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMS 684
Query: 192 LYFLCKRKHVKQAQQ-FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGC 250
+ K KQ + F++ + L+T T++I+I +G+ G + A F+ M D G
Sbjct: 685 IKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGL 744
Query: 251 PVDLLAYNNFLDALC--KGGCVDEATNIFHDMLSKRVEPD-------------------- 288
+ + LC KG V+EAT F +M+ PD
Sbjct: 745 IPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDA 804
Query: 289 --------------AFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
YSI+I C + A L L + +TY I+ L
Sbjct: 805 KSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGL 864
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
+ +++A + ++ M G KP Y ++ + ++ + L +ME ++C P
Sbjct: 865 LQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSV 924
Query: 395 HTYNMVLKLLIRIGRFDKATEVWEN 419
TY ++ + +G+ ++A + N
Sbjct: 925 VTYTAMICGYMSLGKVEEAWNAFRN 949
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 2/309 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
GF+H S+ L+ L + F + L +R + +F + + Y +A D
Sbjct: 76 GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNV-RCRESLFMGLIQHYGKAGSVDK 134
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILIS 227
AI F ++ F TI + L+ L +++A+ FFD AK L + +++ILI
Sbjct: 135 AIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIK 194
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ D A ++F ML+ ++ YN+ + LC+ + +A ++ DM+ KR+ P
Sbjct: 195 GFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRP 254
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+A T+ + + C + + A +++ M P + Y ++ L K +++EA LL
Sbjct: 255 NAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLL 314
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
EM R +KPD YN + H C C V A R+++ M+ C P+ TY M++ RI
Sbjct: 315 GEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRI 374
Query: 408 GRFDKATEV 416
FD V
Sbjct: 375 EDFDSGLNV 383
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKT-YSI 224
P+ A+ F + E G + + L+Y L K ++ Q + + ++ +
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI +GK G KA ++F + C + + N ++ L G +++A + F R
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+ P++ +++I I + D D +A +V D+M + P+V TYN +I LC+ND + +A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
LL++MI + ++P+ ++ + C E + A +LM ME C P Y +++ L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 405 IRIGRFDKA 413
+ GR D+A
Sbjct: 302 GKRGRIDEA 310
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 46/301 (15%)
Query: 112 HSVESFHILVEIL---GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
+++S + L+ +L G ++ +D +MR NS F + K + +
Sbjct: 149 RTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR----LRPNSVSFNILIKGFLDKCDWEA 204
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILIS 227
A + F M E ++P++ ++ L+ FLC+ + +A+ D K A T+ +L+
Sbjct: 205 ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMK 264
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G G+ +A++L M +GC L+ Y + L K G +DEA + +M +R++P
Sbjct: 265 GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 324
Query: 288 D-----------------------------------AFTYSIFIHTYCDANDIHSAFRVL 312
D A TY + I +C D S VL
Sbjct: 325 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVL 384
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
+ M P T+ C++ L K ++ A +L+ M G K ++ A Q D
Sbjct: 385 NAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM---GKKNLSFGSGAWQNLLSDL 441
Query: 373 C 373
C
Sbjct: 442 C 442
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 76/189 (40%)
Query: 231 KIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAF 290
+I D +A LF + G D +Y++ + L K D I + + V
Sbjct: 58 EIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRES 117
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
+ I Y A + A V K+ + + + + N +I L N ++E+A D
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRF 410
++P++ S+N + D C+ A ++ M + P TYN ++ L R
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 411 DKATEVWEN 419
KA + E+
Sbjct: 238 GKAKSLLED 246
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 143/295 (48%), Gaps = 8/295 (2%)
Query: 124 LGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKP 183
LG ++ A + + L E S + + + Y +A + A+ RM + P
Sbjct: 150 LGKTRKAAKILEIL----EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSP 202
Query: 184 TIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKARELF 242
+ ++ +L LC +KQA + D+ + TY+ILI + G A +L
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA 302
M D+GC D++ YN ++ +CK G +DEA +DM S +P+ T++I + + C
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 303 NDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY 362
A ++L M R P+V T+N +I LC+ + A ++L++M G +P++ SY
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 363 NAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
N + C ++ RA+ + RM C+PD TYN +L L + G+ + A E+
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 155/331 (46%), Gaps = 6/331 (1%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAI--LWDFLTEMRESSCCE 147
C++ G L G V ++++LV G CK+ + FL +M SS C+
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN--GICKEGRLDEAIKFLNDM-PSSGCQ 306
Query: 148 INSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF 207
N I ++ A + M G P++ F++L+ FLC++ + +A
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 208 FDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
++ H + +Y+ L+ G+ K +A E + M+ +GC D++ YN L ALCK
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
G V++A I + + SK P TY+ I A A ++LD+MR +L P+ T
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
Y+ ++ L + KV+EA + E G++P+ ++N+I C + RA+ + M
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
C P+ +Y ++++ L G +A E+
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 124/284 (43%), Gaps = 20/284 (7%)
Query: 153 FWFIFKAYSRANLPD-----GAIRSFLRMDEF-------------GIKPTIHDFDMLLYF 194
F F+ N+PD IR F R+ + G P + +++++
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISG 181
Query: 195 LCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDL 254
CK + A D+ + TY+ ++ G +A E+ ML + C D+
Sbjct: 182 YCKAGEINNALSVLDRMSVSPDVV--TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
+ Y ++A C+ V A + +M + PD TY++ ++ C + A + L+
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
M PNV T+N I++ +C + +A +LL +M+ +G P ++N + C
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ RA+ ++ +M + C P+ +YN +L + + D+A E E
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 111/248 (44%), Gaps = 2/248 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
GF SV +F+IL+ L D L +M + C + NS + + + + D
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC-QPNSLSYNPLLHGFCKEKKMDR 397
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILIS 227
AI RM G P I ++ +L LCK V+ A + +Q S TY+ +I
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G K G +GKA +L M + D + Y++ + L + G VDEA FH+ + P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+A T++ + C + A L M PN +Y +I+ L +EA ELL
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 348 DEMILRGV 355
+E+ +G+
Sbjct: 578 NELCNKGL 585
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 3/149 (2%)
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
NN L + + G ++E +M+ PD + I +C A ++L+ +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
+P+V TYN +I CK ++ A +LD M V PD +YN I CD ++ +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 378 ALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
A+ ++ RM + +C+PD TY ++++ R
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCR 251
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 167/399 (41%), Gaps = 62/399 (15%)
Query: 74 FSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEIL--------- 124
F ++ V +VL K A +FF W+ + GF+HSVES+ I+ IL
Sbjct: 102 FDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDA 161
Query: 125 -----------GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSF 173
C F +LW + C +F +F + + AI+ F
Sbjct: 162 NSVLKEMVLSKADCDVFDVLWS------TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCF 215
Query: 174 LRMDEF-----------------------------------GIKPTIHDFDMLLYFLCKR 198
+M F G +PT+ +++++ +CK
Sbjct: 216 SKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKE 275
Query: 199 KHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
V+ A+ F++ K L+ TY+ +I G+GK+G F+ M D C D++ Y
Sbjct: 276 GDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITY 335
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
N ++ CK G + + +M ++P+ +YS + +C + A + MRR
Sbjct: 336 NALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
L+PN +TY +I CK + +A+ L +EM+ GV+ + +Y A+ CD +
Sbjct: 396 VGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455
Query: 378 ALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
A L +M+ P+ +YN ++ ++ D+A E+
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 4/300 (1%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
CK A R G +++ +++ G + F EM++ CCE +
Sbjct: 273 CKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM-CCEPD 331
Query: 150 SDIFWFIFKAYSR-ANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
+ + + + LP G + + M G+KP + + L+ CK ++QA +F+
Sbjct: 332 VITYNALINCFCKFGKLPIG-LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390
Query: 209 -DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
D + + TY+ LI KIG+ A L ML G +++ Y +D LC
Sbjct: 391 VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA 450
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
+ EA +F M + V P+ +Y+ IH + A ++ A +L++++ + P++ Y
Sbjct: 451 ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY 510
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
I LC +K+E A +++EM G+K ++ Y + + + L L+ M++
Sbjct: 511 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 127/295 (43%), Gaps = 3/295 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + +V S+ LV+ F +MR I NL D
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD- 420
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILIS 227
A R M + G++ + + L+ LC + +K+A++ F + + ++ +Y+ LI
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 480
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ K + +A EL + +G DLL Y F+ LC ++ A + ++M ++
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
++ Y+ + Y + + +LD+M+ ++ V T+ +I LCKN V +A +
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 348 DEMILR-GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
+ + G++ + + A+ C +V A L +M + PDR Y ++
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 42/265 (15%)
Query: 137 LTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLC 196
+ EM+E + NS I+ + AY ++ P + M E I+ T+ F +L+ LC
Sbjct: 530 MNEMKECGI-KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 197 KRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLA 256
K K V +A +F++ + F L A +F AM+D
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANA------------------AIFTAMID--------- 621
Query: 257 YNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR 316
LCK V+ AT +F M+ K + PD Y+ + ++ A + DKM
Sbjct: 622 ------GLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 317 RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVS 376
+ ++ Y ++ L +++++A L+EMI G+ PD ++ H + +
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCID 735
Query: 377 RALRLMSRMEK--------DNCFPD 393
A+ L S + K DN P+
Sbjct: 736 EAVELQSYLMKHQLLTSDNDNALPN 760
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 117/262 (44%), Gaps = 6/262 (2%)
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLL 217
+ +A D A+ + GIKP + + ++ LC + ++ A+ ++ K
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
+ Y+ L+ + K G+ + L M + V ++ + +D LCK V +A + F
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 278 HDMLSK-RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
+ + + ++ +A ++ I C N + +A + ++M + L+P+ Y ++ K
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660
Query: 337 NDKVEEAYELLDEMILRGVKPDTWSYNAI--QAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
V EA L D+M G+K D +Y ++ HC+ + +R+ + M + PD
Sbjct: 661 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF--LEEMIGEGIHPDE 718
Query: 395 HTYNMVLKLLIRIGRFDKATEV 416
VLK +G D+A E+
Sbjct: 719 VLCISVLKKHYELGCIDEAVEL 740
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 160/365 (43%), Gaps = 36/365 (9%)
Query: 89 RCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEI 148
+C+ A F + GF+H++ ++ ++E LG +F + + L +MRE+ +
Sbjct: 15 KCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHM 74
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
++ K Y R A+ F RMD + +PT+ ++ ++ L + QA + +
Sbjct: 75 LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY 134
Query: 209 DQAKSHFL------------------------------------LTAKTYSILISGWGKI 232
+ + + + Y ++ G+ +
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
+ ELF ML G + L +N L LCK G V E + ++ + V P+ FTY
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
++FI C ++ A R++ + P+V TYN +I LCKN K +EA L +M+
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
G++PD+++YN + A +C V A R++ + PD+ TY ++ L G ++
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 413 ATEVW 417
A ++
Sbjct: 375 ALALF 379
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 142/313 (45%), Gaps = 3/313 (0%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
AH+ ++ + G V SF I ++ + L M S CE+N + +
Sbjct: 130 AHKVYMRMRD-RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM-SSQGCEMNVVAYCTV 187
Query: 157 FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHF 215
+ N F +M G+ + F+ LL LCK+ VK+ ++ D+ K
Sbjct: 188 VGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV 247
Query: 216 LLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
L TY++ I G + G+ A + +++QG D++ YNN + LCK EA
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV 307
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
M+++ +EPD++TY+ I YC + A R++ +P+ FTY +I LC
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 336 KNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRH 395
+ A L +E + +G+KP+ YN + + + A +L + M + P+
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 396 TYNMVLKLLIRIG 408
T+N+++ L ++G
Sbjct: 428 TFNILVNGLCKMG 440
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 181/425 (42%), Gaps = 62/425 (14%)
Query: 45 LLPDLVSEISRVVS--DHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLG------FS 96
+ PD+ S R+ S PH L L LN S+Q V+ C +G F
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRL-LNNMSSQGCE---MNVVAYCTVVGGFYEENFK 197
Query: 97 AHRFFLWAKSIP-GFQHSVESFHILVEIL---GSCKQFAILWDFLTEMRESSCCEINSDI 152
A + L+ K + G + +F+ L+ +L G K+ L D + + + ++
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG------VLPNL 251
Query: 153 F---WFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD 209
F FI R L DGA+R + E G KP + ++ L+Y LCK ++A+ +
Sbjct: 252 FTYNLFIQGLCQRGEL-DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLG 310
Query: 210 QAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
+ + L + TY+ LI+G+ K G A + + G D Y + +D LC G
Sbjct: 311 KMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYN 328
+ A +F++ L K ++P+ Y+ I + I A ++ ++M L+P V T+N
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 329 CIIKRLCKND-----------------------------------KVEEAYELLDEMILR 353
++ LCK K+E A E+LD M+
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN 490
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
GV PD ++YN++ C + + M + C P+ T+N++L+ L R + D+A
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 414 TEVWE 418
+ E
Sbjct: 551 LGLLE 555
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%), Gaps = 9/243 (3%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-----KSHFLLTAKTYSILISGWGKIGD 234
G P + L+ LC +A F++A K + +L Y+ LI G G
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL----YNTLIKGLSNQGM 406
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
+A +L M ++G ++ +N ++ LCK GCV +A + M+SK PD FT++I
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
IH Y + +A +LD M + P+V+TYN ++ LCK K E+ E M+ +G
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
P+ +++N + C + ++ AL L+ M+ + PD T+ ++ + G D A
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586
Query: 415 EVW 417
++
Sbjct: 587 TLF 589
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 4/266 (1%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
N ++ + K S + A + M E G+ P + F++L+ LCK V A
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 209 DQAKSH-FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
S + T++ILI G+ A E+ MLD G D+ YN+ L+ LCK
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
++ + M+ K P+ FT++I + + C + A +L++M+ ++ P+ T+
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 328 NCIIKRLCKNDKVEEAYELLDEMI-LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+I CKN ++ AY L +M V T +YN I + V+ A +L M
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM- 628
Query: 387 KDNCF-PDRHTYNMVLKLLIRIGRFD 411
D C PD +TY +++ + G +
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVN 654
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 142/324 (43%), Gaps = 23/324 (7%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
CKN F +L G + +++ L I G CK + ++ E +
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL--IAGYCK------GGMVQLAERI---VG 345
Query: 150 SDIF-WFIFKAYSRANLPDG---------AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRK 199
+F F+ ++ +L DG A+ F GIKP + ++ L+ L +
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 200 HVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYN 258
+ +A Q ++ L+ +T++IL++G K+G A L + M+ +G D+ +N
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 259 NFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
+ ++ A I ML V+PD +TY+ ++ C + M
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
PN+FT+N +++ LC+ K++EA LL+EM + V PD ++ + C + ++ A
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 379 LRLMSRMEKD-NCFPDRHTYNMVL 401
L +ME+ TYN+++
Sbjct: 586 YTLFRKMEEAYKVSSSTPTYNIII 609
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 5/240 (2%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSIL 225
DG ++ + F P I F++L++ + ++ A + D + + TY+ L
Sbjct: 446 DGLVKVMISKGYF---PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
++G K E ++ M+++GC +L +N L++LC+ +DEA + +M +K V
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC-NLLPNVFTYNCIIKRLCKNDKVEEAY 344
PDA T+ I +C D+ A+ + KM + + TYN II + V A
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+L EM+ R + PD ++Y + C V+ + + M ++ P T V+ L
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 122/259 (47%), Gaps = 15/259 (5%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G+ + +F+IL+ + + + L M ++ ++ D++ + + + +
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG---VDPDVYTYNSLLNGLCKTSKF 512
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSIL 225
+ + ++ M E G P + F++LL LC+ + + +A ++ K+ + A T+ L
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 226 ISGWGKIGDSGKARELFQAM-----LDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
I G+ K GD A LF+ M + P YN + A + V A +F +M
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP----TYNIIIHAFTEKLNVTMAEKLFQEM 628
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ + + PD +TY + + +C +++ ++ L +M +P++ T +I LC D+V
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRV 688
Query: 341 EEAYELLDEMILRGVKPDT 359
EA ++ M+ +G+ P+
Sbjct: 689 YEAAGIIHRMVQKGLVPEA 707
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 152/372 (40%), Gaps = 32/372 (8%)
Query: 41 VFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQV-LKRCKNLGFSAHR 99
VFN +PD + R + D + +L F+ + + V L G S
Sbjct: 348 VFNGFVPDQFT--YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 100 FFLWAKSIP------GFQHSVESFHILVEILGSCKQFAIL-WDFLTEMRESSCCEINSDI 152
L A + G V++F+ILV G CK + D L ++ S DI
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVN--GLCKMGCVSDADGLVKVMISK--GYFPDI 461
Query: 153 FWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ 210
F F + YS + A+ M + G+ P ++ ++ LL LCK +F D
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK------TSKFEDV 515
Query: 211 AKSHFLLTAK-------TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA 263
+++ + K T++IL+ + +A L + M ++ D + + +D
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 264 LCKGGCVDEATNIFHDMLSK-RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM-RRCNLL 321
CK G +D A +F M +V TY+I IH + + ++ A ++ +M RC L
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC-LG 634
Query: 322 PNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRL 381
P+ +TY ++ CK V Y+ L EM+ G P + + C V A +
Sbjct: 635 PDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694
Query: 382 MSRMEKDNCFPD 393
+ RM + P+
Sbjct: 695 IHRMVQKGLVPE 706
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 9/237 (3%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G V +++ L+ L +F + + M E C N F + ++ R D
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP-NLFTFNILLESLCRYRKLDE 549
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKT--YSILI 226
A+ M + P F L+ CK + A F + + + +++ T Y+I+I
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
+ + + A +LFQ M+D+ D Y +D CK G V+ +M+
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI 669
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
P T I+ C + ++ A ++ +M + L+P + +C DK E A
Sbjct: 670 PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVA 720
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 167/360 (46%), Gaps = 11/360 (3%)
Query: 66 DLELSLNQFSAQISSDLVEQVLKRCK---NLGFSAHRFFLWAKSIPGFQHSVESFHILVE 122
+L+ SL+ +S DL+++VLKR + F+ +A +I GF HS S ++
Sbjct: 57 ELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLY 116
Query: 123 ILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIK 182
ILG ++F +W+ L E + I+ + ++ + SF + +
Sbjct: 117 ILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LV 174
Query: 183 PTIHD---FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKAR 239
P D F+ LL LC+ K + A+ + K F +T++IL+SGW S +A
Sbjct: 175 PDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKS---SEEAE 231
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
F+ M +G D++ YN+ +D CK +++A + M + PD TY+ I
Sbjct: 232 AFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGL 291
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
A VL +M+ P+V YN I+ C ++ +A +L+DEM+ +G+ P+
Sbjct: 292 GLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNA 351
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+YN ++ R+ L RM + C P+ + ++K+ R + D A +WE+
Sbjct: 352 TTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWED 411
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGD 234
M G+KP + ++ L+ CK + +++A + D+ + TY+ +I G G IG
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
KARE+ + M + GC D+ AYN + C + +A + +M+ K + P+A TY++
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
F AND+ ++ + +M LPN + +IK +++KV+ A L ++M+++G
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 1/262 (0%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSH 214
+ Y R D + M G+KP + + ++ LC+ + +A++ F + +
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
L Y+ LI G+ K GD A + F M + D+L Y + C+ G + EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
+FH+M K +EPD+ T++ I+ YC A + AFRV + M + PNV TY +I L
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
CK ++ A ELL EM G++P+ ++YN+I C + A++L+ E D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 395 HTYNMVLKLLIRIGRFDKATEV 416
TY ++ + G DKA E+
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEI 548
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 146/308 (47%), Gaps = 7/308 (2%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCK--QFAILWDFLTEMRESSCCEINSDIFW 154
AH L + + G+ V S+ +V G C+ + +W + M+ + NS I+
Sbjct: 265 AHHLLLLME-LKGYTPDVISYSTVVN--GYCRFGELDKVWKLIEVMKRKGL-KPNSYIYG 320
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH 214
I R A +F M GI P + L+ CKR ++ A +FF + S
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 215 FLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEA 273
+ TY+ +ISG+ +IGD +A +LF M +G D + + ++ CK G + +A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 274 TNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
+ + M+ P+ TY+ I C D+ SA +L +M + L PN+FTYN I+
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 334 LCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
LCK+ +EEA +L+ E G+ DT +Y + +C E+ +A ++ M P
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 394 RHTYNMVL 401
T+N+++
Sbjct: 561 IVTFNVLM 568
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILIS 227
AI F E G+ + ++++++F+C+ +K+A + + +YS +++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ + G+ K +L + M +G + Y + + LC+ + EA F +M+ + + P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D Y+ I +C DI +A + +M ++ P+V TY II C+ + EA +L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
EM +G++PD+ ++ + +C + A R+ + M + C P+ TY ++ L +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 408 GRFDKATEV 416
G D A E+
Sbjct: 470 GDLDSANEL 478
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 1/274 (0%)
Query: 147 EINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQ 206
E +S F + Y +A A R M + G P + + L+ LCK + A +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 207 FFDQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
+ K TY+ +++G K G+ +A +L G D + Y +DA C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVF 325
K G +D+A I +ML K ++P T+++ ++ +C + ++L+ M + PN
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
T+N ++K+ C + ++ A + +M RGV PD +Y + HC + A L M
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 386 EKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ TY++++K ++ +F +A EV++
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKA 238
G++P F L+ CK H+K A + + ++ TY+ LI G K GD A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
EL M G ++ YN+ ++ LCK G ++EA + + + + D TY+ +
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
YC + ++ A +L +M L P + T+N ++ C + +E+ +LL+ M+ +G+ P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
++N++ +C + A + M PD TY ++K
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 181/425 (42%), Gaps = 41/425 (9%)
Query: 7 RSLFSRYKNLTSVVCPLFQHKQNCHHFHSLPTPQVFNPLLP--------DLVSEISRVVS 58
R S ++N LF + F +L + F P + V +I+ V+
Sbjct: 12 RGTLSSFRNFIQ----LFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIK 67
Query: 59 DHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFH 118
R L SL + + +D + VL + K FF WA+S ++ES
Sbjct: 68 LRRA--EPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRR--DSNLESLC 123
Query: 119 ILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSF----L 174
I++ + + K + ++ FW + N+ D ++ F
Sbjct: 124 IVIHLAVASKDLKVAQSLISS-------------FW----ERPKLNVTDSFVQFFDLLVY 166
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGK-I 232
++G P + FD+ L +++A++ F++ ++ L L+ + ++ ++ K
Sbjct: 167 TYKDWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC 224
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
+ A +F+ + G ++ +YN + +C+ G + EA ++ M K PD +Y
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
S ++ YC ++ +++++ M+R L PN + Y II LC+ K+ EA E EMI
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
+G+ PDT Y + C ++ A + M + PD TY ++ +IG +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 413 ATEVW 417
A +++
Sbjct: 405 AGKLF 409
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGD 234
M + G++P I ++ ++ LCK ++++A + + ++ L TY+ L+ + K G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
KA+E+ + ML +G ++ +N ++ C G +++ + + ML+K + P+A T++
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
+ YC N++ +A + M + P+ TY ++K CK ++EA+ L EM +G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
+Y+ + + A + +M ++ D+ ++
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 23/254 (9%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G Q ++ +++ +V G CK I + + + E +N+D + + AY ++
Sbjct: 486 GLQPNIFTYNSIVN--GLCKSGNI-EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSIL 225
D A M G++PTI F++L+ C ++ ++ + + + A T++ L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
+ + + A +++ M +G D Y N + CK + EA +F +M K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
TYS+ I + A V D+MRR L + +E ++
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD-----------------KEIFD 705
Query: 346 LLDEMILRGVKPDT 359
+ +G +PDT
Sbjct: 706 FFSDTKYKGKRPDT 719
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 1/262 (0%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSH 214
+ Y R D + M G+KP + + ++ LC+ + +A++ F + +
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
L Y+ LI G+ K GD A + F M + D+L Y + C+ G + EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
+FH+M K +EPD+ T++ I+ YC A + AFRV + M + PNV TY +I L
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
CK ++ A ELL EM G++P+ ++YN+I C + A++L+ E D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 395 HTYNMVLKLLIRIGRFDKATEV 416
TY ++ + G DKA E+
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEI 548
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 146/308 (47%), Gaps = 7/308 (2%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCK--QFAILWDFLTEMRESSCCEINSDIFW 154
AH L + + G+ V S+ +V G C+ + +W + M+ + NS I+
Sbjct: 265 AHHLLLLME-LKGYTPDVISYSTVVN--GYCRFGELDKVWKLIEVMKRKGL-KPNSYIYG 320
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH 214
I R A +F M GI P + L+ CKR ++ A +FF + S
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 215 FLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEA 273
+ TY+ +ISG+ +IGD +A +LF M +G D + + ++ CK G + +A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 274 TNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
+ + M+ P+ TY+ I C D+ SA +L +M + L PN+FTYN I+
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 334 LCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
LCK+ +EEA +L+ E G+ DT +Y + +C E+ +A ++ M P
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 394 RHTYNMVL 401
T+N+++
Sbjct: 561 IVTFNVLM 568
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILIS 227
AI F E G+ + ++++++F+C+ +K+A + + +YS +++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ + G+ K +L + M +G + Y + + LC+ + EA F +M+ + + P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D Y+ I +C DI +A + +M ++ P+V TY II C+ + EA +L
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
EM +G++PD+ ++ + +C + A R+ + M + C P+ TY ++ L +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 408 GRFDKATEV 416
G D A E+
Sbjct: 470 GDLDSANEL 478
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 1/274 (0%)
Query: 147 EINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQ 206
E +S F + Y +A A R M + G P + + L+ LCK + A +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 207 FFDQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
+ K TY+ +++G K G+ +A +L G D + Y +DA C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVF 325
K G +D+A I +ML K ++P T+++ ++ +C + ++L+ M + PN
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
T+N ++K+ C + ++ A + +M RGV PD +Y + HC + A L M
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 386 EKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ TY++++K ++ +F +A EV++
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKA 238
G++P F L+ CK H+K A + + ++ TY+ LI G K GD A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
EL M G ++ YN+ ++ LCK G ++EA + + + + D TY+ +
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
YC + ++ A +L +M L P + T+N ++ C + +E+ +LL+ M+ +G+ P+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
++N++ +C + A + M PD TY ++K
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 181/425 (42%), Gaps = 41/425 (9%)
Query: 7 RSLFSRYKNLTSVVCPLFQHKQNCHHFHSLPTPQVFNPLLP--------DLVSEISRVVS 58
R S ++N LF + F +L + F P + V +I+ V+
Sbjct: 12 RGTLSSFRNFIQ----LFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIK 67
Query: 59 DHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFH 118
R L SL + + +D + VL + K FF WA+S ++ES
Sbjct: 68 LRRA--EPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRR--DSNLESLC 123
Query: 119 ILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSF----L 174
I++ + + K + ++ FW + N+ D ++ F
Sbjct: 124 IVIHLAVASKDLKVAQSLISS-------------FW----ERPKLNVTDSFVQFFDLLVY 166
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGK-I 232
++G P + FD+ L +++A++ F++ ++ L L+ + ++ ++ K
Sbjct: 167 TYKDWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC 224
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
+ A +F+ + G ++ +YN + +C+ G + EA ++ M K PD +Y
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
S ++ YC ++ +++++ M+R L PN + Y II LC+ K+ EA E EMI
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
+G+ PDT Y + C ++ A + M + PD TY ++ +IG +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 413 ATEVW 417
A +++
Sbjct: 405 AGKLF 409
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGD 234
M + G++P I ++ ++ LCK ++++A + + ++ L TY+ L+ + K G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
KA+E+ + ML +G ++ +N ++ C G +++ + + ML+K + P+A T++
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
+ YC N++ +A + M + P+ TY ++K CK ++EA+ L EM +G
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
+Y+ + + A + +M ++ D+ ++
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 23/254 (9%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G Q ++ +++ +V G CK I + + + E +N+D + + AY ++
Sbjct: 486 GLQPNIFTYNSIVN--GLCKSGNI-EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSIL 225
D A M G++PTI F++L+ C ++ ++ + + + A T++ L
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
+ + + A +++ M +G D Y N + CK + EA +F +M K
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
TYS+ I + A V D+MRR L + +E ++
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD-----------------KEIFD 705
Query: 346 LLDEMILRGVKPDT 359
+ +G +PDT
Sbjct: 706 FFSDTKYKGKRPDT 719
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 146/309 (47%), Gaps = 3/309 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
GF F+ L+ + F W F E + ++ S F + K A +
Sbjct: 124 GFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYS--FGILIKGCCEAGEIEK 181
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQ-FFDQAKSHFLLTAKTYSILIS 227
+ + + EFG P + + L+ CK+ +++A+ FF+ K + +TY++LI+
Sbjct: 182 SFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G K G + E+++ M + G +L YN ++ LCK G +A +F +M + V
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ TY+ I C ++ A +V+D+M+ + PN+ TYN +I C K+ +A L
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
++ RG+ P +YN + + C + S A +++ ME+ P + TY +++ R
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 408 GRFDKATEV 416
+KA ++
Sbjct: 422 DNMEKAIQL 430
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 144/285 (50%)
Query: 129 QFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDF 188
QF L + ES + ++ I +Y ++ + +I F M + G P + F
Sbjct: 73 QFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCF 132
Query: 189 DMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQ 248
+ LL F+ Q FF++ KS +L ++ ILI G + G+ K+ +L + +
Sbjct: 133 NYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEF 192
Query: 249 GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSA 308
G +++ Y +D CK G +++A ++F +M + + TY++ I+
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 309 FRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAH 368
F + +KM+ + PN++TYNC++ +LCK+ + ++A+++ DEM RGV + +YN +
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 369 HCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
C +++ A +++ +M+ D P+ TYN ++ +G+ KA
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 123/251 (49%), Gaps = 1/251 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILIS 227
A + F M E G+ I ++ L+ LC+ + +A + DQ KS + TY+ LI
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ +G GKA L + + +G L+ YN + C+ G A + +M + ++P
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
TY+I I T+ ++++ A ++ M L+P+V TY+ +I C ++ EA L
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
M+ + +P+ YN + +C RAL+L+ ME+ P+ +Y ++++L +
Sbjct: 467 KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526
Query: 408 GRFDKATEVWE 418
+ +A + E
Sbjct: 527 RKSKEAERLVE 537
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 1/181 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKA 238
G+ P++ +++L+ C++ A + + + + +K TY+ILI + + + KA
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+L +M + G D+ Y+ + C G ++EA+ +F M+ K EP+ Y+ I
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
YC + A ++L +M L PNV +Y +I+ LCK K +EA L+++MI G+ P
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Query: 359 T 359
T
Sbjct: 548 T 548
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTA-KTYSILISGWGKIG 233
+M GI P + ++ L+ C + +A KS L + TY+IL+SG+ + G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
D+ A ++ + M ++G + Y +D + +++A + M + PD TYS
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
+ IH +C ++ A R+ M N PN YN +I CK A +LL EM +
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
+ P+ SY + C + A RL+ +M P +++
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 92/197 (46%), Gaps = 6/197 (3%)
Query: 109 GFQHSVESFHILVEILGSCKQ--FAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
G S+ +++ILV G C++ + + EM E + + + + ++R++
Sbjct: 368 GLSPSLVTYNILVS--GFCRKGDTSGAAKMVKEMEERGI-KPSKVTYTILIDTFARSDNM 424
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSIL 225
+ AI+ L M+E G+ P +H + +L++ C + + +A + F + + Y+ +
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G+ K G S +A +L + M ++ ++ +Y ++ LCK EA + M+ +
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 286 EPDAFTYSIFIHTYCDA 302
+P S+ D+
Sbjct: 545 DPSTSILSLISRAKNDS 561
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 150/311 (48%), Gaps = 12/311 (3%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G V +F ILV+ L F +D L MR+ N + + R + D
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP-NLHTYNTLICGLLRVHRLDD 416
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL------TAKTY 222
A+ F M+ G+KPT + + + + + K A + F++ K+ + A Y
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 223 SILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS 282
S+ K G +A+++F + D G D + YN + K G +DEA + +M+
Sbjct: 477 SL-----AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 283 KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEE 342
EPD + I+T A+ + A+++ +M+ L P V TYN ++ L KN K++E
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 343 AYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
A EL + M+ +G P+T ++N + C + EV+ AL+++ +M C PD TYN ++
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 403 LLIRIGRFDKA 413
L++ G+ +A
Sbjct: 652 GLVKNGQVKEA 662
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 157/345 (45%), Gaps = 7/345 (2%)
Query: 80 SDLVEQVLKRCKNLGFSAHR--FFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFL 137
S LV + CK+ S R F + K + G Q + ++++L+ L I D
Sbjct: 750 SILVPIIRYSCKHNNVSGARTLFEKFTKDL-GVQPKLPTYNLLIGGLLEADMIEIAQDVF 808
Query: 138 TEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCK 197
+++ + C + + F+ AY ++ D + M + ++++ L K
Sbjct: 809 LQVKSTGCIP-DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 198 RKHVKQAQQFFDQAKSH--FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLL 255
+V A + S F TA TY LI G K G +A++LF+ MLD GC +
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
YN ++ K G D A +F M+ + V PD TYS+ + C + ++
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 316 RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM-ILRGVKPDTWSYNAIQAHHCDHCE 374
+ L P+V YN II L K+ ++EEA L +EM RG+ PD ++YN++ +
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
V A ++ + +++ P+ T+N +++ G+ + A V++
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQT 1092
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 153/343 (44%), Gaps = 37/343 (10%)
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
+ GF+ S++++ L+ LG + + L EM E+ + N F + RA
Sbjct: 216 LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-ETLGLKPNVYTFTICIRVLGRAGKI 274
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS---------HFLL 217
+ A RMD+ G P + + +L+ LC + + A++ F++ K+ + L
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 218 TAK---------------------------TYSILISGWGKIGDSGKARELFQAMLDQGC 250
+ T++IL+ K G+ G+A + M DQG
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
+L YN + L + +D+A +F +M S V+P A+TY +FI Y + D SA
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
+KM+ + PN+ N + L K + EA ++ + G+ PD+ +YN + +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
E+ A++L+S M ++ C PD N ++ L + R D+A
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 2/261 (0%)
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT- 218
Y ++ A+ +F +M GI P I + LY L K ++A+Q F K L+
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
+ TY++++ + K+G+ +A +L M++ GC D++ N+ ++ L K VDEA +F
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
M +++P TY+ + I A + + M + PN T+N + LCKND
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
+V A ++L +M+ G PD ++YN I + +V A+ +M+K +PD T
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFVTLC 681
Query: 399 MVLKLLIRIGRFDKATEVWEN 419
+L +++ + A ++ N
Sbjct: 682 TLLPGVVKASLIEDAYKIITN 702
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 143/326 (43%), Gaps = 11/326 (3%)
Query: 101 FLWAKSIPG---FQHSVESFHILVEIL---GSCKQFAILWDFLTEMRESSCCEINSDIFW 154
F + KS+ G H+ E+ + ++E L G ++ A ++D + + + +++ +
Sbjct: 102 FSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLM----QKRIIKRDTNTYL 157
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KS 213
IFK+ S A + +M EFG + ++ L++ L K + +A + + +
Sbjct: 158 TIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE 217
Query: 214 HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEA 273
F + +TYS L+ G GK D L + M G ++ + + L + G ++EA
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 274 TNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
I M + PD TY++ I C A + A V +KM+ P+ TY ++ R
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 334 LCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
N ++ + EM G PD ++ + C A + M P+
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 394 RHTYNMVLKLLIRIGRFDKATEVWEN 419
HTYN ++ L+R+ R D A E++ N
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGN 423
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 40/307 (13%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
A FL KS G V +++ L++ G + L++ EM C E N+ +
Sbjct: 804 AQDVFLQVKST-GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHEC-EANTITHNIV 861
Query: 157 FKAYSRANLPDGAIRSFLR-MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
+A D A+ + M + PT + L+ L K + +A+Q F+ +
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 216 LL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
Y+ILI+G+GK G++ A LF+ M+ +G DL Y+ +D LC G VDE
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 275 NIFHDM------------------------------------LSKRVEPDAFTYSIFIHT 298
+ F ++ S+ + PD +TY+ I
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
A + A ++ ++++R L PNVFT+N +I+ + K E AY + M+ G P+
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Query: 359 TWSYNAI 365
T +Y +
Sbjct: 1102 TGTYEQL 1108
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
C N I+ + + +A D A F RM + G++P + + +L+ LC V +
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 206 QFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAM-LDQGCPVDLLAYNNFLDA 263
+F + K L Y+++I+G GK +A LF M +G DL YN+ +
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 264 LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPN 323
L G V+EA I++++ +EP+ FT++ I Y + A+ V M PN
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Query: 324 VFTYNCIIKR 333
TY + R
Sbjct: 1102 TGTYEQLPNR 1111
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 140/327 (42%), Gaps = 11/327 (3%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
A + F+ K + + +V +++ L+ LG + + M + C N+ F +
Sbjct: 557 AWKMFMRMKEMK-LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP-NTITFNTL 614
Query: 157 FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL 216
F + + A++ +M + G P + ++ +++ L K VK+A FF Q K
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY 674
Query: 217 LTAKTYSILISGWGKIGDSGKARELFQAML----DQGCPVDLLAYNNFLDALCKGGCVDE 272
T L+ G K A ++ L DQ P +L + + + ++ +D
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ--PANLF-WEDLIGSILAEAGIDN 731
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTY-CDANDIHSAFRVLDKMRR-CNLLPNVFTYNCI 330
A + +++ + D + + I Y C N++ A + +K + + P + TYN +
Sbjct: 732 AVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLL 791
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
I L + D +E A ++ ++ G PD +YN + + ++ L M C
Sbjct: 792 IGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHEC 851
Query: 391 FPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ T+N+V+ L++ G D A +++
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLY 878
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 168/386 (43%), Gaps = 37/386 (9%)
Query: 68 ELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSC 127
E +L+ S + + V VL+R K++ A +F W + H ES++ L+ ++ C
Sbjct: 53 ENTLSALSFKPQPEFVIGVLRRLKDVN-RAIEYFRWYERRTELPHCPESYNSLLLVMARC 111
Query: 128 KQFAILWDFLTEMRESS--------------CCEINS-----DIFWFIFK---------- 158
+ F L L EM + C + N D+ + K
Sbjct: 112 RNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAY 171
Query: 159 -----AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS 213
A+S N D + F +M E G +PT+H F L+ K V A D+ KS
Sbjct: 172 TTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS 231
Query: 214 HFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
L Y++ I +GK+G A + F + G D + Y + + LCK +DE
Sbjct: 232 SSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE 291
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
A +F + R P + Y+ I Y A A+ +L++ R +P+V YNCI+
Sbjct: 292 AVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP 392
L K KV+EA ++ +EM + P+ +YN + C ++ A L M+K FP
Sbjct: 352 CLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP 410
Query: 393 DRHTYNMVLKLLIRIGRFDKATEVWE 418
+ T N+++ L + + D+A ++E
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFE 436
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 153/304 (50%), Gaps = 2/304 (0%)
Query: 116 SFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLR 175
+F L++ LG + + +M +S C NS ++ + K + + + +
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDC-RTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAKTYSILISGWGKIGD 234
M P + + + + K ++ + F++ K+ F+ A++YSILI G K G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
+ + ELF +M +QGC +D AYN +D CK G V++A + +M +K EP TY
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I + + A+ + ++ + + NV Y+ +I K +++EAY +L+E++ +G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
+ P+ +++N++ E++ AL M++ C P++ TY +++ L ++ +F+KA
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 415 EVWE 418
W+
Sbjct: 748 VFWQ 751
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 162 RANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAK 220
+A + F M E G +++++ CK V +A Q ++ K+ F T
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TY +I G KI +A LF+ + ++++ Y++ +D K G +DEA I ++
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ K + P+ +T++ + A +I+ A M+ PN TY +I LCK K
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
+A+ EM +G+KP T SY + + ++ A L R + + PD YN +
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 401 LKLLIRIGRFDKATEVWE 418
++ L R A ++E
Sbjct: 804 IEGLSNGNRAMDAFSLFE 821
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 143/348 (41%), Gaps = 42/348 (12%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G++ +V F L+ + L EM+ SS +++DI + ++ +
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS---LDADIVLYNVCIDSFGKVGKV 254
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSIL 225
D A + F ++ G+KP + ++ LCK + +A + F+ K+ + Y+ +
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTM 314
Query: 226 ISGWG-----------------------------------KIGDSGKARELFQAMLDQGC 250
I G+G K+G +A ++F+ M
Sbjct: 315 IMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA 374
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
P +L YN +D LC+ G +D A + M + P+ T +I + C + + A
Sbjct: 375 P-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
+ ++M P+ T+ +I L K +V++AY++ ++M+ + ++ Y ++ +
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+H ++ M NC PD N + + + G +K ++E
Sbjct: 494 NHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 109/259 (42%)
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT 218
Y A D A R G P++ ++ +L L K V +A + F++ K
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPN 376
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
TY+ILI + G A EL +M G ++ N +D LCK +DEA +F
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
+M K PD T+ I + A++V +KM + N Y +IK +
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
+ E+ +++ +MI + PD N E + + ++ PD +Y+
Sbjct: 497 RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYS 556
Query: 399 MVLKLLIRIGRFDKATEVW 417
+++ LI+ G ++ E++
Sbjct: 557 ILIHGLIKAGFANETYELF 575
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 116/282 (41%), Gaps = 37/282 (13%)
Query: 110 FQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGA 169
F S+ IL+ L ++ M+E C +++ + + + + + A
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV-LDTRAYNIVIDGFCKCGKVNKA 606
Query: 170 IRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISG 228
+ M G +PT+ + ++ L K + +A F++AKS + L YS LI G
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 229 WGKIG--DSG---------------------------KAREL------FQAMLDQGCPVD 253
+GK+G D KA E+ FQ+M + C +
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
+ Y ++ LCK ++A + +M + ++P +Y+ I A +I A + D
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
+ + +P+ YN +I+ L ++ +A+ L +E RG+
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 2/236 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
GF+ +V ++ +++ L + + L E +S E+N I+ + + + D
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAY-MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDE 675
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILIS 227
A + + G+ P ++ ++ LL L K + + +A F K + TY ILI+
Sbjct: 676 AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G K+ KA +Q M QG ++Y + L K G + EA +F + P
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
D+ Y+ I + N AF + ++ RR L + T ++ L KND +E+A
Sbjct: 796 DSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 163/319 (51%), Gaps = 12/319 (3%)
Query: 101 FLWAKSIPGFQHSVESFHILVEIL---GSCKQFAILWDFLTEM--RESSCCEINSDIFWF 155
L + ++ G + ++ S+++++ L G K+ + + LTEM R S E+ +
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV---LTEMNRRGYSLDEVT---YNT 315
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
+ K Y + A+ M G+ P++ + L++ +CK ++ +A +F DQ +
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 216 LL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
L +TY+ L+ G+ + G +A + + M D G ++ YN ++ C G +++A
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
+ DM K + PD +YS + +C + D+ A RV +M + P+ TY+ +I+
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
C+ + +EA +L +EM+ G+ PD ++Y A+ +C ++ +AL+L + M + PD
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 395 HTYNMVLKLLIRIGRFDKA 413
TY++++ L + R +A
Sbjct: 556 VTYSVLINGLNKQSRTREA 574
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 159/340 (46%), Gaps = 8/340 (2%)
Query: 82 LVEQVLKRCKNLGFSAHRF--FLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTE 139
+++ ++ +N+ F+ + F L ++ P +V +++IL+ + +
Sbjct: 175 VLDATIRSKRNISFAENVFKEMLESQVSP----NVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 140 MRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRK 199
M E+ C N + + Y + D + M G++P + +++++ LC+
Sbjct: 231 M-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 200 HVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYN 258
+K+ + + + L TY+ LI G+ K G+ +A + ML G ++ Y
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349
Query: 259 NFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
+ + ++CK G ++ A M + + P+ TY+ + + ++ A+RVL +M
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
P+V TYN +I C K+E+A +L++M +G+ PD SY+ + + C +V A
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 379 LRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
LR+ M + PD TY+ +++ R +A +++E
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 167/412 (40%), Gaps = 58/412 (14%)
Query: 61 RHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVE--SFH 118
RHP+ L+ SA + + +L + +N +F WA F + + H
Sbjct: 34 RHPYQ-----LHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLH 88
Query: 119 ILV--------EILGSCKQFAILWD------FLTEMRESSCCEINSDIFWFIFKAYSRAN 164
IL +IL L D F + C S +F + K+YSR +
Sbjct: 89 ILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLS 148
Query: 165 LPDGA--------------------------IRS----------FLRMDEFGIKPTIHDF 188
L D A IRS F M E + P + +
Sbjct: 149 LIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTY 208
Query: 189 DMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLD 247
++L+ C ++ A FD+ ++ L TY+ LI G+ K+ +L ++M
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 248 QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHS 307
+G +L++YN ++ LC+ G + E + + +M + D TY+ I YC + H
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 308 AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQA 367
A + +M R L P+V TY +I +CK + A E LD+M +RG+ P+ +Y +
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 368 HHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
++ A R++ M + P TYN ++ G+ + A V E+
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 144/327 (44%), Gaps = 19/327 (5%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G SV ++ L+ + +FL +MR C N + + +S+ +
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP-NERTYTTLVDGFSQKGYMNE 398
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILIS 227
A R M++ G P++ ++ L+ C ++ A + K L +YS ++S
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ + D +A + + M+++G D + Y++ + C+ EA +++ +ML + P
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D FTY+ I+ YC D+ A ++ ++M +LP+V TY+ +I L K + EA LL
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMS-------RMEKDNCF--------- 391
++ P +Y+ + +C + E + L+ E D F
Sbjct: 579 LKLFYEESVPSDVTYHTL-IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWE 418
PD YN+++ R G KA +++
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 141/345 (40%), Gaps = 70/345 (20%)
Query: 109 GFQHSVESFHILVEILGSC--KQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRAN 164
GF SV +++ L+ G C + L +M+E ++ D+ + + + R+
Sbjct: 410 GFSPSVVTYNALIN--GHCVTGKMEDAIAVLEDMKEKG---LSPDVVSYSTVLSGFCRSY 464
Query: 165 LPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYS 223
D A+R M E GIKP + L+ C+++ K+A +++ L + TY+
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 224 ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL------------------- 264
LI+ + GD KA +L M+++G D++ Y+ ++ L
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYE 584
Query: 265 -------------------------------CKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
C G + EA +F ML K +PD Y+
Sbjct: 585 ESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYN 644
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I IH +C A DI A+ + +M + L + T ++K L K KV E L+ +I+
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE----LNSVIVH 700
Query: 354 GVKPDTWSYNAIQAH---HCDHCE--VSRALRLMSRMEKDNCFPD 393
++ S A QA +H E + L +++ M KD P+
Sbjct: 701 VLRSCELS-EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 151/311 (48%), Gaps = 6/311 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G + +V ++ L+ L + +++ L++M E +IN D+F F + A+ +
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER---KINPDVFTFSALIDAFVKEGKL 342
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAKTYSIL 225
A + + M + I P+I + L+ C + +A+Q F+ H TY+ L
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G+ K + E+F+ M +G + + YN + L + G D A IF +M+S V
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P+ TY+ + C + A V + ++R + P ++TYN +I+ +CK KVE+ ++
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
L + L+GVKPD +YN + + C A L M++D P+ YN +++ +
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 406 RIGRFDKATEV 416
R G + + E+
Sbjct: 583 RDGDREASAEL 593
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 141/316 (44%), Gaps = 14/316 (4%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G H+ ++ IL+ Q + L +M + E N + Y +
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGY-EPNIVTLSSLLNGYCHSKRISE 169
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-------T 221
A+ +M G +P F+ L++ L +A D+ + AK T
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR------MVAKGCQPDLVT 223
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML 281
Y ++++G K GD+ A L M +L YN +D LCK +D+A N+F +M
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 282 SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVE 341
+K + P+ TYS I C+ A R+L M + P+VFT++ +I K K+
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 342 EAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
EA +L DEM+ R + P +Y+++ C H + A ++ M +CFPD TYN ++
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 402 KLLIRIGRFDKATEVW 417
K + R ++ EV+
Sbjct: 404 KGFCKYKRVEEGMEVF 419
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 143/312 (45%), Gaps = 2/312 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G Q + ++ ++V L + ++ L +M E E I+ I + D
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILIS 227
A+ F M+ GI+P + + L+ LC A + D + T+S LI
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+ K G +A +L+ M+ + ++ Y++ ++ C +DEA +F M+SK P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D TY+ I +C + V +M + L+ N TYN +I+ L + + A E+
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
EM+ GV P+ +YN + C + ++ +A+ + +++ P +TYN++++ + +
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 408 GRFDKATEVWEN 419
G+ + +++ N
Sbjct: 515 GKVEDGWDLFCN 526
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 122/245 (49%), Gaps = 1/245 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIG 233
RM G +P + + +++ LCKR A ++ + L Y+ +I G K
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
A LF+ M +G +++ Y++ + LC G +A+ + DM+ +++ PD FT+S
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 330
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I + + A ++ D+M + ++ P++ TY+ +I C +D+++EA ++ + M+ +
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
PD +YN + C + V + + M + + TYN++++ L + G D A
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 414 TEVWE 418
E+++
Sbjct: 451 QEIFK 455
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 1/267 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA- 211
F + A ++ N D I +M GI + + +L+ C+R + A +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
K + T S L++G+ +A L M G + + +N + L
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
EA + M++K +PD TY + ++ C D AF +L+KM + L P V YN II
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
LCK +++A L EM +G++P+ +Y+++ + C++ S A RL+S M +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWE 418
PD T++ ++ ++ G+ +A ++++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYD 350
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
F + KS + +S L+S K+ L + M + G P + Y+ ++ C+
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 128
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
+ A + M+ EP+ T S ++ YC + I A ++D+M PN T
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+N +I L ++K EA L+D M+ +G +PD +Y + C + A L+++ME
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ P YN ++ L + D A +++
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A LF M+ ++ ++ L A+ K D ++ M + + + +TYSI I+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + + A VL KM + PN+ T + ++ C + ++ EA L+D+M + G +P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+T ++N + H + S A+ L+ RM C PD TY +V+ L + G D A
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 36/204 (17%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKAREL 241
P + ++ L+ CK K V++ + F + L+ TY+ILI G + GD A+E+
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 242 FQAMLDQGCPVDLLAYNNFL-----------------------------------DALCK 266
F+ M+ G P +++ YN L + +CK
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
G V++ ++F ++ K V+PD Y+ I +C A + +M+ LPN
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 327 YNCIIKRLCKNDKVEEAYELLDEM 350
YN +I+ ++ E + EL+ EM
Sbjct: 574 YNTLIRARLRDGDREASAELIKEM 597
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 1/187 (0%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
N+ + + + +A D A F M G+ P I ++ LL LCK +++A F
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 209 DQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
+ +S T TY+I+I G K G +LF + +G D++AYN + C+
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
G +EA +F +M P++ Y+ I D ++ ++ +MR C + T
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609
Query: 328 NCIIKRL 334
+ L
Sbjct: 610 GLVTNML 616
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 125/266 (46%), Gaps = 1/266 (0%)
Query: 152 IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA 211
I+ + Y+ + F R+ E G PT+ + L+ K + +A +
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Query: 212 KSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
K + KTYS++I+G+ K+ D A +F+ M+ +G D++ YNN + A C G +
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
D A +M R P T+ IH Y + D+ + V D MRRC +P V T+N +
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
I L + ++E+A E+LDEM L GV + +Y I + + +A +R++ +
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 391 FPDRHTYNMVLKLLIRIGRFDKATEV 416
D TY +LK + GR A V
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAV 716
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
F I Y+++ ++ F M G PT+H F+ L+ L +++ +++A + D+
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 213 -SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
+ TY+ ++ G+ +GD+GKA E F + ++G VD+ Y L A CK G +
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
A + +M ++ + ++F Y+I I + D+ A ++ +M++ + P++ TY I
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
K + A + ++EM GVKP+ +Y + +AL M+
Sbjct: 772 SACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 392 PDRHTYNMVLKLLI 405
PD+ Y+ +L L+
Sbjct: 832 PDKAVYHCLLTSLL 845
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 139/311 (44%), Gaps = 2/311 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
GF +V ++ L+ + + + + M+E + N + + + +
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGV-KHNLKTYSMMINGFVKLKDWAN 537
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA-QQFFDQAKSHFLLTAKTYSILIS 227
A F M + G+KP + ++ ++ C ++ +A Q + K T +T+ +I
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ K GD ++ E+F M GC + +N ++ L + +++A I +M V
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ TY+ + Y D AF +++ L ++FTY ++K CK+ +++ A +
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
EM R + +++ YN + +V A L+ +M+K+ PD HTY + +
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 408 GRFDKATEVWE 418
G ++AT+ E
Sbjct: 778 GDMNRATQTIE 788
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 2/233 (0%)
Query: 113 SVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRS 172
+V +F+ L+ L +Q + L EM + N + I + Y+ A
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS-ANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGK 231
F R+ G+ I ++ LL CK ++ A + + + + Y+ILI GW +
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR 741
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
GD +A +L Q M +G D+ Y +F+ A K G ++ AT +M + V+P+ T
Sbjct: 742 RGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKT 801
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
Y+ I + A+ A ++M+ + P+ Y+C++ L + EAY
Sbjct: 802 YTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY 854
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 141/354 (39%), Gaps = 41/354 (11%)
Query: 103 WAKSIPGFQH----SVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFK 158
W I F+ S F ++V+ G + MR S I+ +
Sbjct: 294 WQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITP-TSRIYTSLIH 352
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLL 217
AY+ D A+ +M E GI+ ++ + +++ K H + A +FD+AK H L
Sbjct: 353 AYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL 412
Query: 218 TAKTYSILI-----------------------------------SGWGKIGDSGKARELF 242
A Y +I G+ + D K +F
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA 302
+ + + G ++ Y ++ K G + +A + M + V+ + TYS+ I+ +
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 303 NDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY 362
D +AF V + M + + P+V YN II C ++ A + + EM +P T ++
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 363 NAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
I + ++ R+L + M + C P HT+N ++ L+ + +KA E+
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEI 646
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 149/310 (48%), Gaps = 2/310 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
GFQ + ++ ++ ++ Q A+ + L +M E + ++++ + I + D
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI-KLDAVKYSIIIDGLCKDGSLDN 281
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILIS 227
A F M+ G K I ++ L+ C + D K T+S+LI
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+ K G +A +L + M+ +G + + YN+ +D CK ++EA + M+SK +P
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D T++I I+ YC AN I + +M ++ N TYN +++ C++ K+E A +L
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
EM+ R V+PD SY + CD+ E+ +AL + ++EK D Y +++ +
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 408 GRFDKATEVW 417
+ D A +++
Sbjct: 522 SKVDDAWDLF 531
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIG 233
RM E G +P + +L +CK A + + + + L A YSI+I G K G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
A LF M +G D++ YN + C G D+ + DM+ +++ P+ T+S
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
+ I ++ + A ++L +M + + PN TYN +I CK +++EEA +++D MI +
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
G PD ++N + +C + L L M + TYN +++ + G+ + A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 414 TEVWE 418
++++
Sbjct: 458 KKLFQ 462
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 178/409 (43%), Gaps = 43/409 (10%)
Query: 26 HKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHH-DLELSLNQFSAQISSDLVE 84
HK ++L N + D V I R+V P+ LN + L
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 85 QVLKRC--KNLGFSAHRFFLWAKS------------------IPGFQHSVESFHILVEIL 124
++L++ +N+ A ++ + I GF+ + +++ L+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG-- 306
Query: 125 GSCKQFAILWD----FLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFG 180
G C A WD L +M + N F + ++ + A + M + G
Sbjct: 307 GFCN--AGRWDDGAKLLRDMIKRKISP-NVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 181 IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-------TYSILISGWGKIG 233
I P ++ L+ CK +++A Q D L+ +K T++ILI+G+ K
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVD------LMISKGCDPDIMTFNILINGYCKAN 417
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
ELF+ M +G + + YN + C+ G ++ A +F +M+S+RV PD +Y
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I + CD ++ A + K+ + + ++ Y II +C KV++A++L + L+
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
GVK D +YN + + C +S+A L +M ++ PD TYN++++
Sbjct: 538 GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 138/303 (45%), Gaps = 5/303 (1%)
Query: 113 SVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRS 172
+V +F +L++ + L EM + N+ + + + + N + AI+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP-NTITYNSLIDGFCKENRLEEAIQM 390
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGK 231
M G P I F++L+ CK + + F + + + TY+ L+ G+ +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
G A++LFQ M+ + D+++Y LD LC G +++A IF + ++E D
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
Y I IH C+A+ + A+ + + + + YN +I LC+ D + +A L +M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP-DRHTYNMVLKLLIRIGRF 410
G PD +YN + H + + A L+ M K + FP D T MV+ +L G
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEM-KSSGFPADVSTVKMVINML-SSGEL 628
Query: 411 DKA 413
DK+
Sbjct: 629 DKS 631
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 143/355 (40%), Gaps = 41/355 (11%)
Query: 99 RFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFK 158
R + ++ +P +V F+ L + KQ+ ++ +M ES + +
Sbjct: 77 RDMIQSRPLP----TVIDFNRLFSAIAKTKQYELVLALCKQM-ESKGIAHSIYTLSIMIN 131
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLL 217
+ R A + ++ + G +P F+ LL LC V +A + D+ +
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
T T + L++G G A L M++ G + + Y L+ +CK G A +
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC-- 335
M + ++ DA YSI I C + +AF + ++M ++ TYN +I C
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 336 ---------------------------------KNDKVEEAYELLDEMILRGVKPDTWSY 362
K K+ EA +LL EM+ RG+ P+T +Y
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 363 NAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
N++ C + A++++ M C PD T+N+++ + R D E++
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIG 233
+M+ GI +I+ +++ C+ + + A + K + ++ L++G
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
+A EL M++ G L+ N ++ LC G V +A + M+ +P+ TY
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
++ C + A +L KM N+ + Y+ II LCK+ ++ A+ L +EM ++
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
G K D +YN + C+ +L+ M K P+ T+++++ ++ G+ +A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 414 TEVWE 418
++ +
Sbjct: 353 DQLLK 357
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A +LF+ M+ ++ +N A+ K + + M SK + +T SI I+
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + AF + K+ + P+ +N ++ LC +V EA EL+D M+ G KP
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ N + C + +VS A+ L+ RM + P+ TY VL ++ + G+ A E+
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
F D +S L T ++ L S K L + M +G + + ++ C+
Sbjct: 76 FRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCR 135
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
+ A + ++ EPD ++ ++ C + A ++D+M P + T
Sbjct: 136 CRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLIT 195
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
N ++ LC N KV +A L+D M+ G +P+ +Y + C + + A+ L+ +ME
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+ N D Y++++ L + G D A
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 6/233 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEI--NSDIFWFIFKAYSRANLP 166
G + +F+IL+ G CK I D L RE S + N+ + + + + ++
Sbjct: 398 GCDPDIMTFNILIN--GYCKANRI-DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSIL 225
+ A + F M ++P I + +LL LC +++A + F + KS L Y I+
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G A +LF ++ +G +D AYN + LC+ + +A +F M +
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
PD TY+I I + +D +A ++++M+ +V T +I L +
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 168/358 (46%), Gaps = 37/358 (10%)
Query: 94 GFSAHRFFLWAKSI------PGFQHSVESFHILVEILGSCKQFAILWD---FLTEMRESS 144
G H F+ A+++ G S+ S++IL++ G CK +L D + M+ +
Sbjct: 335 GLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD--GLCK-LGMLSDAKTIVGLMKRNG 391
Query: 145 CCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
C ++ + + Y D A M P + ++LL+ L K + +A
Sbjct: 392 VCP-DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEA 450
Query: 205 QQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAM------------------ 245
++ + + + L T +I++ G G+ KA E+ + M
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL 510
Query: 246 -----LDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
++ C DL+ Y+ L+ LCK G EA N+F +M+ ++++PD+ Y+IFIH +C
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
I SAFRVL M + ++ TYN +I L +++ E + L+DEM +G+ P+
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+YN + C+ +V A L+ M + N P+ ++ +++ ++ FD A EV+E
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 26/274 (9%)
Query: 170 IRSFLRMDEF-GI-KPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF-LLTAKTYSILI 226
I S + +DE+ G+ +P ++++L CK ++ A+ F+ + + L + ++Y+I +
Sbjct: 274 IFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWL 333
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
G + G +A + + M D+G + +YN +D LCK G + +A I M V
Sbjct: 334 QGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC 393
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
PDA TY +H YC + +A +L +M R N LPN +T N ++ L K ++ EA EL
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME-------------------- 386
L +M +G DT + N I C E+ +A+ ++ M
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 387 ---KDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
++NC PD TY+ +L L + GRF +A ++
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
L++ M+ G +N + ALC CVD A +F +M K +P+ FT+ I + YC
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
A +L+ M +LPN YN I+ C+ + +++ +++++M G+ PD
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCF----PDRHTYNMVLKLLIRIGRFDKATEV 416
++N+ + C +V A R+ S ME D P+ TYN++LK ++G + A +
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 417 WEN 419
+E+
Sbjct: 314 FES 316
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKAREL 241
P + + LL LCK +A+ F + L + Y+I I + K G A +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
+ M +GC L YN+ + L + E + +M K + P+ TY+ I C+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
+ A +LD+M + N+ PNVF++ +I+ CK + A E+ + +
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAV 691
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 91/232 (39%), Gaps = 13/232 (5%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSC---- 145
CK S+ L G S+E+++ L+ LG Q + + EM+E
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNI 629
Query: 146 CEINSDIFWFIF--KAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQ 203
C N+ I + K NL D M + I P + F L+ CK
Sbjct: 630 CTYNTAIQYLCEGEKVEDATNLLD-------EMMQKNIAPNVFSFKYLIEAFCKVPDFDM 682
Query: 204 AQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA 263
AQ+ F+ A S YS++ + G KA EL +A+LD+G + Y + +++
Sbjct: 683 AQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742
Query: 264 LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
LCK ++ A+ I H M+ + D I + A DKM
Sbjct: 743 LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 187/404 (46%), Gaps = 20/404 (4%)
Query: 26 HKQNCHHFHSLPTPQVFNPLLPD-----LVSEISRVVSDHRHPHHD-LELSLNQFSAQIS 79
H H HSL P F D ++ ++ HR + ++ L++ ++
Sbjct: 49 HFLGTHFLHSLGAPDKFPNRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLT 108
Query: 80 SDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVES--FHILVEILGSCKQFAILWDFL 137
+LV +V+ R ++ A + L + H S ++ ++++LG ++F
Sbjct: 109 EELVLEVVNRNRSDWKPA--YILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVF 166
Query: 138 TEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCK 197
EM + +N + + Y+ A+ D A+ F R EFGI + F LL +LC+
Sbjct: 167 DEMSKRDGF-VNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCR 225
Query: 198 RKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
KHV+ A+ F + F K +++++GW +G+ +A+ ++ ++ C D+++Y
Sbjct: 226 YKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSY 285
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
++AL K G + +A ++ M R PD + I C I A V ++
Sbjct: 286 GTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISE 345
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG--VKPD--TWSYNAIQAHHCDHC 373
PNV TYN ++K LCK + E+ +EL++EM L+G P+ T+SY +
Sbjct: 346 KGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDV 405
Query: 374 EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
++ ++ RM K+ C YN++ +L ++ + +K E+W
Sbjct: 406 DI-----VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIW 444
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 14/251 (5%)
Query: 176 MDEFGIKPTIHDFDMLLY-----FLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGW 229
+ + +K ++H +LY L K + ++ Q FD+ +K + KTY +L++ +
Sbjct: 129 LSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRY 188
Query: 230 GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE--P 287
+A +F+ + G DL+A++ L LC+ V+ A +F S+R E
Sbjct: 189 AAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLF---CSRRREFGC 245
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D ++ ++ +C ++H A R + P+V +Y +I L K K+ +A EL
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
M PD N + C + AL + + + P+ TYN +LK L +I
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 408 GRFDKATEVWE 418
R +K VWE
Sbjct: 366 RRTEK---VWE 373
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 150/314 (47%), Gaps = 6/314 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G +V S+ L+ +L + Q + + FLT+M + C + + + R D
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILIS 227
+ FG++P + ++ L+ C ++ +A F + +TY LI+
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ K G A ++ ML GC +++ Y N ++ALC+ EA ++ M + P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 288 DAFTYSIFIHTYCDANDI---HSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
T++ FI CDA + FR +++ RC PN+ TYN ++ L K +++EEAY
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP--PNIVTYNELLDGLAKANRIEEAY 513
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
L E+ +RGV+ + +YN + C+ AL+L+ +M D PD T NM++
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 405 IRIGRFDKATEVWE 418
+ G+ ++A ++ +
Sbjct: 574 CKQGKAERAAQMLD 587
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 155/378 (41%), Gaps = 46/378 (12%)
Query: 79 SSDLVEQVLKRCKNLGFS--AHRFFLWAKSIPGFQHSVESF-HILVEILGSCKQFAILWD 135
S DL V+ + +G + A F K G SV+ + H+L +LG + +++
Sbjct: 110 SEDLFISVISVYRQVGLAERAVEMFYRIKEF-GCDPSVKIYNHVLDTLLGE-NRIQMIYM 167
Query: 136 FLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFL 195
+M+ E N + + KA + N DGA + + M G P + ++ +
Sbjct: 168 VYRDMKRDGF-EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSM 226
Query: 196 CKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLL 255
C+ VK+ ++ ++ F Y+ LI+G K D A EL + M+++G +++
Sbjct: 227 CEVGLVKEGRELAER----FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT------------------------ 291
+Y+ ++ LC G ++ A + ML + P+ +T
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 292 ------------YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
Y+ + +C +I A V M PN+ TY +I K
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
++ A + ++M+ G P+ Y + C H + A L+ M K+NC P T+N
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Query: 400 VLKLLIRIGRFDKATEVW 417
+K L GR D A +V+
Sbjct: 463 FIKGLCDAGRLDWAEKVF 480
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 7/329 (2%)
Query: 83 VEQVLKRCKNLGFSAHRFFLWAKSIPGF--QHSVESFHILVEILGSCKQFAILWDFLTEM 140
+ ++K C G + LW + I GF Q +V +++ LV+ S + M
Sbjct: 319 LSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Query: 141 RESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKH 200
E C N + + +++ DGA+ + +M G P + + ++ LC+
Sbjct: 379 EEIGCSP-NIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Query: 201 VKQAQQFFD-QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYN 258
K+A+ + +K + + T++ I G G A ++F+ M Q CP +++ YN
Sbjct: 438 FKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYN 497
Query: 259 NFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
LD L K ++EA + ++ + VE + TY+ +H C+A A +++ KM
Sbjct: 498 ELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD 557
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL--RGVKPDTWSYNAIQAHHCDHCEVS 376
P+ T N II CK K E A ++LD + R +PD SY + C
Sbjct: 558 GKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCRE 617
Query: 377 RALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+ L+ RM P T+++++ I
Sbjct: 618 DGVILLERMISAGIVPSIATWSVLINCFI 646
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 3/249 (1%)
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILI 226
GA M E GI P + + L+ LC ++ A F Q K T S L+
Sbjct: 264 GAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLV 323
Query: 227 SGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
G G + A +L+ M+ G +++AYN + C G + +A ++F M
Sbjct: 324 KGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGC 383
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P+ TY I+ + + A + +KM PNV Y +++ LC++ K +EA
Sbjct: 384 SPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAES 443
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN-CFPDRHTYNMVLKLL 404
L++ M P ++NA CD + A ++ +ME+ + C P+ TYN +L L
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 405 IRIGRFDKA 413
+ R ++A
Sbjct: 504 AKANRIEEA 512
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 11/220 (5%)
Query: 201 VKQAQQFFDQAKSHFLL--TAKTYSILISGWGKIGDSGKARELFQAMLDQG--CPVDLLA 256
V A FF + L T T+ ++I G + L Q M QG C DL
Sbjct: 56 VPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL-- 113
Query: 257 YNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR 316
+ + + + G + A +F+ + +P Y+ + T N I + V M+
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173
Query: 317 RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVS 376
R PNVFTYN ++K LCKN+KV+ A +LL EM +G PD SY + + C+ V
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 377 RALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
L R E P YN ++ L + + A E+
Sbjct: 234 EGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFEL 268
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 137 LTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE-FGIKPTIHDFDMLLYFL 195
L E+ C + F K A D A + F +M++ P I ++ LL L
Sbjct: 444 LIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL 503
Query: 196 CKRKHVKQAQQFFDQAKSHFL----LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCP 251
K +++A + + F+ ++ TY+ L+ G G G A +L M+ G
Sbjct: 504 AKANRIEEA---YGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKS 560
Query: 252 VDLLAYNNFLDALCKGGCVDEATNIFHDMLS---KRVEPDAFTYSIFIHTYCDANDIHSA 308
D + N + A CK G + A + D++S ++ PD +Y+ I C +N
Sbjct: 561 PDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619
Query: 309 FRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+L++M ++P++ T++ +I +D V
Sbjct: 620 VILLERMISAGIVPSIATWSVLINCFILDDIV 651
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 66/164 (40%)
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
L + + L G VD + M + + I Y A + +
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
++ P+V YN ++ L ++++ Y + +M G +P+ ++YN + C + +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
V A +L+ M C PD +Y V+ + +G + E+ E
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE 240
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 159/324 (49%), Gaps = 6/324 (1%)
Query: 100 FFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKA 159
F A GF H+ ++ +L++ L K+F + L +M+ +C +F + +
Sbjct: 75 IFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETC-RFQESLFLNLMRH 133
Query: 160 YSRANLPDGAIRSFLRMDEFG-IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT 218
+SR++L D + F + +KP+++ L L V +++ AK + L
Sbjct: 134 FSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQ 193
Query: 219 AKT--YSILISGWGKIGDSGKARELFQAMLDQGCPV-DLLAYNNFLDALCKGGCVDEATN 275
T ++IL+ K GD A + + M G + + Y+ +D L EA
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 276 IFHDMLSKR-VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
+F DM+SK + PD T+++ I+ +C A ++ A ++LD M++ PNV+ Y+ ++
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
CK K++EA + DE+ G+K DT Y + C + E A++L+ M+ C D
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADT 373
Query: 395 HTYNMVLKLLIRIGRFDKATEVWE 418
TYN++L+ L GR ++A ++ +
Sbjct: 374 LTYNVILRGLSSEGRSEEALQMLD 397
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 138/310 (44%), Gaps = 6/310 (1%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLT--EMRESSCCEINSDIFW 154
+ + L+AK G Q + F+ILV+ CK I + FL EM+ S NS +
Sbjct: 179 SRKLLLYAKHNLGLQPNTCIFNILVK--HHCKNGDINFAFLVVEEMKRSGISYPNSITYS 236
Query: 155 FIFKAYSRANLPDGAIRSFLRM-DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD-QAK 212
+ + A+ F M + GI P F++++ C+ V++A++ D K
Sbjct: 237 TLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKK 296
Query: 213 SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
+ YS L++G+ K+G +A++ F + G +D + Y ++ C+ G DE
Sbjct: 297 NGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDE 356
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
A + +M + R D TY++ + A ++LD+ + N +Y I+
Sbjct: 357 AMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILN 416
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP 392
LC N ++E+A + L M RG+ P ++N + C+ +R++ + P
Sbjct: 417 ALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIP 476
Query: 393 DRHTYNMVLK 402
++ V++
Sbjct: 477 GPKSWGAVVE 486
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 125/262 (47%), Gaps = 6/262 (2%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIK-PTIHDFDMLLYFLCKRKHVKQAQQF 207
N+ IF + K + + + A M GI P + L+ L K+A +
Sbjct: 195 NTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVEL 254
Query: 208 FDQAKSHFLLTAK--TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
F+ S ++ T++++I+G+ + G+ +A+++ M GC ++ Y+ ++ C
Sbjct: 255 FEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFC 314
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVF 325
K G + EA F ++ ++ D Y+ ++ +C + A ++L +M+ +
Sbjct: 315 KVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTL 374
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
TYN I++ L + EEA ++LD+ GV + SY I C + E+ +A++ +S M
Sbjct: 375 TYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVM 434
Query: 386 EKDNCFPDRHTYNMVLKLLIRI 407
+ +P T+N +L++R+
Sbjct: 435 SERGIWPHHATWN---ELVVRL 453
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
F + + RA + A + M + G P ++++ L+ CK +++A+Q FD+ K
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 213 SHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
L L Y+ L++ + + G++ +A +L M C D L YN L L G +
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
EA + S+ V + +Y I ++ C ++ A + L M + P+ T+N ++
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
RLC++ E +L + G+ P S+ A+ C ++ L+ +
Sbjct: 451 VRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 160/359 (44%), Gaps = 17/359 (4%)
Query: 71 LNQFSAQISSDLVEQVL------------KRCKNLGFSAHRFFLWAKSIPGFQHSVESFH 118
L++ + ++S LV +VL RC L A+RFFLW+ F+H+V S+H
Sbjct: 97 LDELNVRVSGLLVREVLVGILRNLSYDNKARCAKL---AYRFFLWSGEQECFRHTVNSYH 153
Query: 119 ILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE 178
+L++I C ++ +W + EM + + F + + A L A+ F++
Sbjct: 154 LLMKIFAECGEYKAMWRLVDEMVQDGF-PTTARTFNLLICSCGEAGLAKQAVVQFMKSKT 212
Query: 179 FGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGK 237
F +P H ++ +L L K K + + Q + F TY+IL+ ++G +
Sbjct: 213 FNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDR 272
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
LF M G D YN L L KG A + M ++P Y+ I
Sbjct: 273 FDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLID 332
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
A ++ + LD+M + P+V Y +I + ++++A E+ EM ++G P
Sbjct: 333 GLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ ++YN++ C E A L+ ME C P+ Y+ ++ L + G+ +A +V
Sbjct: 393 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKV 451
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 173/395 (43%), Gaps = 54/395 (13%)
Query: 67 LELSLNQFSAQISSDLVEQVLKRCKN--LGFSAHRFFLWAKSIPGFQHSVESFHILVEIL 124
+E +L +S +++ V+K N LGF RFF+WA S ESF +++++L
Sbjct: 47 IEPALEPLVPFLSKNIITSVIKDEVNRQLGF---RFFIWASRRE-RLRSRESFGLVIDML 102
Query: 125 GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPT 184
+ W L E++ S ++S F + AY++ + + A+ SF RM EF +P
Sbjct: 103 SEDNGCDLYWQTLEELK-SGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPD 161
Query: 185 I------------------------------------HDFDMLLYFLCKRKHVKQAQQFF 208
+ + F +L+ L K+ AQ+ F
Sbjct: 162 VFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMF 221
Query: 209 DQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
D + + TY+ILISG + G + AR+LF M G D +A+N LD CK
Sbjct: 222 DDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKL 281
Query: 268 GCVDEATNIFHDMLSKRVEPDAFT-----YSIFIHTYCDANDIHSAFRVLDKMRRCNLLP 322
G + EA + + E D F YS I A AF + M + N+ P
Sbjct: 282 GRMVEAFELL-----RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP 336
Query: 323 NVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLM 382
++ Y +I+ L K K+E+A +LL M +G+ PDT+ YNA+ C + L
Sbjct: 337 DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQ 396
Query: 383 SRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
M + FPD T+ +++ + R G +A E++
Sbjct: 397 LEMSETESFPDACTHTILICSMCRNGLVREAEEIF 431
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 39/259 (15%)
Query: 198 RKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
R++ + + + + K + Y+ILI G K G A +L +M +G D Y
Sbjct: 317 RRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCY 376
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
N + ALC G ++E ++ +M PDA T++I I + C + A + ++ +
Sbjct: 377 NAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEK 436
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM--------------------------- 350
P+V T+N +I LCK+ +++EA LL +M
Sbjct: 437 SGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESG 496
Query: 351 -ILR-----------GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
IL+ G PD SYN + C ++ AL+L++ ++ PD TYN
Sbjct: 497 SILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYN 556
Query: 399 MVLKLLIRIGRFDKATEVW 417
++ L R+GR ++A +++
Sbjct: 557 TLINGLHRVGREEEAFKLF 575
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 1/221 (0%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSIL 225
D A + F M G P + LL CK + +A + K F+L + YS L
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G + +A EL+ ML + D++ Y + L K G +++A + M SK +
Sbjct: 310 IDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
PD + Y+ I C + + +M P+ T+ +I +C+N V EA E
Sbjct: 370 SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEE 429
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+ E+ G P ++NA+ C E+ A L+ +ME
Sbjct: 430 IFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 121/280 (43%), Gaps = 45/280 (16%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
GF + + L++ L +++ ++ M + + I DI + + + S+A
Sbjct: 298 GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKN---IKPDIILYTILIQGLSKAGKI 354
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF-FDQAKSHFLLTAKTYSIL 225
+ A++ M GI P + ++ ++ LC R +++ + + +++ A T++IL
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR- 284
I + G +A E+F + GC + +N +D LCK G + EA + H M R
Sbjct: 415 ICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRP 474
Query: 285 ------------------VE--------------------PDAFTYSIFIHTYCDANDIH 306
VE PD +Y++ I+ +C A DI
Sbjct: 475 ASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDID 534
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
A ++L+ ++ L P+ TYN +I L + + EEA++L
Sbjct: 535 GALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKL 574
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE-----ATNI 276
+ +LIS + K+G + KA E F M + C D+ YN L + + +E A +
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR----EEVFFMLAFAV 185
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
+++ML P+ +T+ I + A ++ D M + PN TY +I LC+
Sbjct: 186 YNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 337 NDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
++A +L EM G PD+ ++NA+ C + A L+ EKD
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 397 YNMVLKLLIRIGRFDKATEVWEN 419
Y+ ++ L R R+ +A E++ N
Sbjct: 306 YSSLIDGLFRARRYTQAFELYAN 328
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 122/240 (50%), Gaps = 1/240 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKA 238
GI P + L+ CK H+ +A Q D S +T++ILI+G+ K
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
ELF+ M +G D + YN + C+ G ++ A +F +M+S++V P+ TY I +
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
CD + A + +K+ + + ++ YN II +C KV++A++L + L+GVKP
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+YN + C +S A L +ME+D PD TYN++++ + G K+ ++ E
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 157/345 (45%), Gaps = 14/345 (4%)
Query: 74 FSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAIL 133
FSA + + VL CK + + G H++ + I++ C++ +
Sbjct: 95 FSAIAKTKQYDLVLALCKQM------------ELKGIAHNLYTLSIMINCFCRCRKLCLA 142
Query: 134 WDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLY 193
+ + ++ + E N+ F + A+ RM E G KP + + L+
Sbjct: 143 FSAMGKIIKLGY-EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 194 FLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPV 252
LC +A D+ + A TY +++ K G + A EL + M ++ +
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 253 DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
D + Y+ +D LCK G +D A N+F++M K + + TY+I I +C+A ++L
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
M + + PNV T++ +I K K+ EA EL EMI RG+ PDT +Y ++ C
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ +A +++ M C P+ T+N+++ + R D E++
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 150/326 (46%), Gaps = 3/326 (0%)
Query: 94 GFSAHRFFLWAKSIP-GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDI 152
G A L K + G Q + ++ ++ ++ Q A+ + L +M E + ++++
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI-KLDAVK 265
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQA 211
+ I + D A F M+ GI I +++L+ C + D
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
K T+S+LI + K G +A EL + M+ +G D + Y + +D CK +D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
+A + M+SK +P+ T++I I+ YC AN I + KM ++ + TYN +I
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
+ C+ K+ A EL EM+ R V P+ +Y + CD+ E +AL + ++EK
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVW 417
D YN+++ + + D A +++
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLF 531
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 126/262 (48%), Gaps = 2/262 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
+ + + + N D A + M G P I F++L+ CK + + F +
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 213 SHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
++ TY+ LI G+ ++G A+ELFQ M+ + P +++ Y LD LC G +
Sbjct: 431 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
+A IF + ++E D Y+I IH C+A+ + A+ + + + P V TYN +I
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
LCK + EA L +M G PD W+YN + H + +++++L+ +++
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610
Query: 392 PDRHTYNMVLKLLIRIGRFDKA 413
D T MV+ +L GR K+
Sbjct: 611 VDASTIKMVIDML-SDGRLKKS 631
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 134/274 (48%), Gaps = 1/274 (0%)
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
C+ N+ + + ++ A+ +M+E IK + +++ LCK + A
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 206 QFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
F++ + + T TY+ILI G+ G +L + M+ + +++ ++ +D+
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
K G + EA + +M+ + + PD TY+ I +C N + A +++D M PN+
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
T+N +I CK +++++ EL +M LRGV DT +YN + C+ +++ A L
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 385 MEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
M P+ TY ++L L G +KA E++E
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A +LF+ M+ ++ ++ A+ K D + M K + + +T SI I+
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + AF + K+ + PN T++ +I LC +V EA EL+D M+ G KP
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
D + N + C + + A+ L+ +M + C P+ TY VL ++ + G+ A E+
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 149/313 (47%), Gaps = 8/313 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G + +V + L++ +F L EM+E I DIF + + S+A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG---IAPDIFCYNSLIIGLSKAKRM 503
Query: 167 DGAIRSFL-RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTY-SI 224
D A RSFL M E G+KP + + + A ++ + + +L K +
Sbjct: 504 DEA-RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI+ + K G +A +++M+DQG D Y ++ L K VD+A IF +M K
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+ PD F+Y + I+ + ++ A + D+M L PNV YN ++ C++ ++E+A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
ELLDEM ++G+ P+ +Y I +C +++ A RL M+ PD Y ++
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 405 IRIGRFDKATEVW 417
R+ ++A ++
Sbjct: 743 CRLNDVERAITIF 755
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 3/309 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + ++ L+ L K+ FL EM E+ + N+ + Y A+
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL-KPNAFTYGAFISGYIEASEFAS 540
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA-QQFFDQAKSHFLLTAKTYSILIS 227
A + M E G+ P L+ CK+ V +A + L AKTY++L++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G K A E+F+ M +G D+ +Y ++ K G + +A++IF +M+ + + P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ Y++ + +C + +I A +LD+M L PN TY II CK+ + EA+ L
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
DEM L+G+ PD++ Y + C +V RA+ + K C +N ++ + +
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKF 779
Query: 408 GRFDKATEV 416
G+ + TEV
Sbjct: 780 GKTELKTEV 788
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 138/279 (49%), Gaps = 6/279 (2%)
Query: 147 EINSDIFWFIFKAYSRANL-PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
++ D+ + K + A L DGA++ M G+ P + +D+L+ LCK K ++ A+
Sbjct: 238 QLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK 297
Query: 206 QFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
+ S + L TYS+LI G K ++ A+ L M+ G + Y+ + +
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVM 357
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
K G +++A +F M++ + P A Y+ I YC ++ + +L +M++ N++ +
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
+TY ++K +C + ++ AY ++ EMI G +P+ Y + + A+R++
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 385 MEKDNCFPDRHTYNMVLKLLIRIGRFDKA----TEVWEN 419
M++ PD YN ++ L + R D+A E+ EN
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 145/350 (41%), Gaps = 40/350 (11%)
Query: 99 RFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFK 158
R FL G + + ++ + +FA ++ EMRE N + +
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP-NKVLCTGLIN 565
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT 218
Y + A ++ M + GI + +L+ L K V A++ F + + +
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 219 -AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
+Y +LI+G+ K+G+ KA +F M+++G +++ YN L C+ G +++A +
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+M K + P+A TY I YC + D+ AFR+ D+M+ L+P+ F Y ++ C+
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 338 DKVEEAY--------------------------------------ELLDEMILRGVKPDT 359
+ VE A L+D R KP+
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGR 409
+YN + + C + A L +M+ N P TY +L ++GR
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGR 855
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 133/329 (40%), Gaps = 71/329 (21%)
Query: 161 SRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTA 219
S+ + + A F M G+ P + L+ C+ K+V+Q + + K + +++
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 220 KTYSILISGWGKIGDS-----------------------------------GKARELFQA 244
TY ++ G GD G A + +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 245 MLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAND 304
M +QG D+ YN+ + L K +DEA + +M+ ++P+AFTY FI Y +A++
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 305 IHSAFRVLDKMRRCNLLPNVF-----------------------------------TYNC 329
SA + + +MR C +LPN TY
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 330 IIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN 389
++ L KNDKV++A E+ EM +G+ PD +SY + + +A + M ++
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 390 CFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
P+ YNM+L R G +KA E+ +
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 137/299 (45%), Gaps = 2/299 (0%)
Query: 116 SFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLR 175
++ +V+ + S ++ + EM +S C N I+ + K + + + A+R
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMI-ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGD 234
M E GI P I ++ L+ L K K + +A+ F + ++ A TY ISG+ + +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
A + + M + G + + ++ CK G V EA + + M+ + + DA TY++
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
++ + + A + +MR + P+VF+Y +I K +++A + DEM+ G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+ P+ YN + C E+ +A L+ M P+ TY ++ + G +A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 127/280 (45%), Gaps = 2/280 (0%)
Query: 116 SFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLR 175
++ +L++ L K+ L EM +S +++ + + + D A
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEM-DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAKTYSILISGWGKIGD 234
M GI + +D + + K +++A+ FD S + A+ Y+ LI G+ + +
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
+ EL M + + Y + +C G +D A NI +M++ P+ Y+
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I T+ + A RVL +M+ + P++F YN +I L K +++EA L EM+ G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
+KP+ ++Y A + + + E + A + + M + P++
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 114/266 (42%), Gaps = 29/266 (10%)
Query: 151 DIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ 210
D+FW ++K N+ F +K + ML+ C+ +V+ + +
Sbjct: 203 DLFWDVYKGMVERNVV------------FDVKT----YHMLIIAHCRAGNVQLGKDVLFK 246
Query: 211 AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
+ F +T ++ + G A +L ++M+ +G Y+ +D LCK +
Sbjct: 247 TEKEF----RTATLNVDG---------ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
++A ++ +M S V D TYS+ I + +A ++ +M + + Y+C
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
I + K +E+A L D MI G+ P +Y ++ +C V + L+ M+K N
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 391 FPDRHTYNMVLKLLIRIGRFDKATEV 416
+TY V+K + G D A +
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNI 439
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 11/258 (4%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
N+ + I Y ++ A R F M G+ P + L+ C+ V++A F
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 209 DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQ-----GCPVDLLAYNNFLDA 263
K + ++ LI+ K G + E+ ++D G P D+ YN +D
Sbjct: 756 GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDY 814
Query: 264 LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPN 323
LCK G ++ A +FH M + + P TY+ ++ Y F V D+ + P+
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 324 VFTYNCIIKRLCKNDKVEEAYELLDEMILR-----GVKPDTWSYNAIQAHHCDHCEVSRA 378
Y+ II K +A L+D+M + G K + A+ + E+ A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 379 LRLMSRMEKDNCFPDRHT 396
++M M + PD T
Sbjct: 935 EKVMENMVRLQYIPDSAT 952
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 178/389 (45%), Gaps = 18/389 (4%)
Query: 29 NCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRH-PHHDLELSLNQFSAQISSDLVEQVL 87
N F + TP P+ D + + ++ ++ P L L+ Q++ + QV
Sbjct: 25 NHRFFSTELTPTTITPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQV- 83
Query: 88 KRCKNLGFS---AHRFFLWAKSI-PGFQHSVESFHILVEILGSCKQFAILWDFLTEMRES 143
C N S HRFFL++++ P F H+ + + ++ I+G+ + + W+ E+ +
Sbjct: 84 --CNNFPLSWRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKR 141
Query: 144 SCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQ 203
+N F + K + A + F M+ FG + + + LCK K V++
Sbjct: 142 GL--VNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEE 199
Query: 204 AQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA 263
A+ F + K TY +I G+ +GD +A +L+ M+D+G VD+ A ++
Sbjct: 200 AKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMET 259
Query: 264 LCKGGCVDEATNIFHDMLSKR-VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLP 322
L K DEA+ +F+ M+SKR + D Y + I C I A +V D+MR +
Sbjct: 260 LLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYV 319
Query: 323 NVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK-PDTWSYNAIQAHHCDHCEVSRALRL 381
+ T+ +I L +V EAY L++ GV+ PD Y+ + S A +
Sbjct: 320 DNLTWASLIYGLLVKRRVVEAYGLVE-----GVENPDISIYHGLIKGLVKIKRASEATEV 374
Query: 382 MSRMEKDNCFPDRHTYNMVLKL-LIRIGR 409
+M + C P HTY M+L+ L R GR
Sbjct: 375 FRKMIQRGCEPIMHTYLMLLQGHLGRRGR 403
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 168/369 (45%), Gaps = 7/369 (1%)
Query: 35 SLPTP-QVFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNL 93
+ PTP Q NP +V +S ++ + H E +L+ F ++ + QVLK+ N
Sbjct: 283 TAPTPRQHCNPGY--VVENVSSILRRFKW-GHAAEEALHNFGFRMDAYQANQVLKQMDNY 339
Query: 94 GFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIF 153
+A FF W K PGF+H ++ +V LG KQF + L EM C + N+ +
Sbjct: 340 A-NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGC-KPNTVTY 397
Query: 154 WFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS 213
+ +Y RAN A+ F +M E G +P + L+ K + A + + +
Sbjct: 398 NRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQE 457
Query: 214 HFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
L TYS++I+ GK G A LF M+ QGC +L+ +N + K +
Sbjct: 458 AGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYET 517
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
A ++ DM + +PD TYSI + + A V +M+R N +P+ Y ++
Sbjct: 518 ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 577
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP 392
K V++A++ M+ G++P+ + N++ + +S A L+ M P
Sbjct: 578 LWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHP 637
Query: 393 DRHTYNMVL 401
TY ++L
Sbjct: 638 SLQTYTLLL 646
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TY+ ++ G+ G+ +L M+ GC + + YN + + + + EA N+F+ M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
EPD TY I + A + A + +M+ L P+ FTY+ II L K +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
A+ L EM+ +G P+ ++N + A H AL+L M+ PD+ TY++V
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 401 LKLLIRIGRFDKATEVW 417
+++L G ++A V+
Sbjct: 541 MEVLGHCGFLEEAEGVF 557
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 5/242 (2%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKA 238
G K H + ++ L + K + + D+ + TY+ LI +G+ +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+F M + GC D + Y +D K G +D A +++ M + PD FTYS+ I+
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
A + +A R+ +M PN+ T+N +I K E A +L +M G +PD
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 359 TWSYNAIQA--HHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+Y+ + HC E A + + M++ N PD Y +++ L + G DKA +
Sbjct: 534 KVTYSIVMEVLGHCGFLE--EAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 417 WE 418
++
Sbjct: 592 YQ 593
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%)
Query: 253 DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
D Y + L + E + +M+ +P+ TY+ IH+Y AN + A V
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
++M+ P+ TY +I K ++ A ++ M G+ PDT++Y+ I
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ A RL M C P+ T+N+++ L + ++ A +++ +
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRD 524
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G ++ +++ LG EM C N F + +++A +
Sbjct: 459 GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTP-NLVTFNIMIALHAKARNYET 517
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILIS 227
A++ + M G +P + +++ L +++A+ F + + +++ Y +L+
Sbjct: 518 ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 577
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
WGK G+ KA + +QAML G ++ N+ L + + EA N+ ML+ + P
Sbjct: 578 LWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHP 637
Query: 288 DAFTYSIFIHTYCDA 302
TY++ + DA
Sbjct: 638 SLQTYTLLLSCCTDA 652
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 151/343 (44%), Gaps = 37/343 (10%)
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
+ G ++ + +F+I++ C Q ++ L +M + E + + + R N
Sbjct: 113 VLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGY-EPDRVTIGSLVNGFCRRNRV 171
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF------------------ 208
A+ +M E G KP I ++ ++ LCK K V A FF
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 209 ------------------DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGC 250
D K TYS L+ + K G +A+ELF+ M+
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
D++ Y++ ++ LC +DEA +F M+SK D +Y+ I+ +C A + +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
+ +M + L+ N TYN +I+ + V++A E +M G+ PD W+YN + C
Sbjct: 352 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC 411
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
D+ E+ +AL + M+K D TY V++ + + G+ ++A
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 120/244 (49%), Gaps = 1/244 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIG 233
+M+ GI+ ++ F++++ C V A + K + T L++G+ +
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
A L M++ G D++AYN +D+LCK V++A + F ++ K + P+ TY+
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
++ C+++ A R+L M + + PNV TY+ ++ KN KV EA EL +EM+
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+ PD +Y+++ C H + A ++ M C D +YN ++ + R +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 414 TEVW 417
+++
Sbjct: 350 MKLF 353
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 1/218 (0%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGK 231
F M I P I + L+ LC + +A Q FD S L +Y+ LI+G+ K
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
+LF+ M +G + + YN + + G VD+A F M + PD +T
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
Y+I + CD ++ A + + M++ + ++ TY +I+ +CK KVEEA+ L +
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN 389
L+G+KPD +Y + + C + L ++M+++
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 134/301 (44%), Gaps = 2/301 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G++ + +++ +++ L K+ +DF E+ E N + + ++
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILIS 227
A R M + I P + + LL K V +A++ F++ + TYS LI+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G +A ++F M+ +GC D+++YN ++ CK V++ +F +M + +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ TY+ I + A D+ A +M + P+++TYN ++ LC N ++E+A +
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
++M R + D +Y + C +V A L + PD TY ++ L
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 408 G 408
G
Sbjct: 484 G 484
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
F D KS + ++ L+S K+ L + M G DL +N ++ C
Sbjct: 73 FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
V A +I ML EPD T ++ +C N + A ++DKM P++
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 192
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
YN II LCK +V +A++ E+ +G++P+ +Y A+ C+ S A RL+S M
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
K P+ TY+ +L ++ G+ +A E++E
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSIL 225
D A + F M G + ++ L+ CK K V+ + F + L++ TY+ L
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G+ + GD KA+E F M G D+ YN L LC G +++A IF DM + +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+ D TY+ I C + A+ + + L P++ TY ++ LC + E
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491
Query: 346 LLDEMILRGV 355
L +M G+
Sbjct: 492 LYTKMKQEGL 501
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A +LF M+ ++ +N L A+ K D ++ M + D +T++I I+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + A +L KM + P+ T ++ C+ ++V +A L+D+M+ G KP
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
D +YNAI C V+ A +E+ P+ TY ++ L R+ A +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 418 EN 419
+
Sbjct: 249 SD 250
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
+ + +A + ++ F M + G+ ++ L+ + V +AQ+FF Q F
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFF 394
Query: 216 LLTAK--TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEA 273
++ TY+IL+ G G+ KA +F+ M + +D++ Y + +CK G V+EA
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 274 TNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
++F + K ++PD TY+ + C +H + KM++ L+ N +C +
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN----DCTL-- 508
Query: 334 LCKNDKVEEAYELLDEMILRGVKP 357
+ + + EL+ +M+ G P
Sbjct: 509 --SDGDITLSAELIKKMLSCGYAP 530
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 144/314 (45%), Gaps = 10/314 (3%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMR----ESSCCEINSDIFWFIFKAYSRAN 164
G H++ +++IL+ Q ++ L +M E S ++S + Y
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS-----LLNGYCHGK 94
Query: 165 LPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYS 223
A+ +M E G +P F L++ L +A D+ + TY
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 224 ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
++++G K GD A L M D++ +N +D+LCK VD+A N+F +M +K
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
+ P+ TYS I C A ++L M + PN+ T+N +I K K EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
+L D+MI R + PD ++YN++ C H + +A ++ M +CFPD TYN ++K
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 404 LIRIGRFDKATEVW 417
+ R + TE++
Sbjct: 335 FCKSKRVEDGTELF 348
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 183/408 (44%), Gaps = 18/408 (4%)
Query: 17 TSVVCPLFQHKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQF-- 74
T+++ LF H + +L V P+LV+ VV + D++L+ N
Sbjct: 119 TTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVT--YGVVVNGLCKRGDIDLAFNLLNK 175
Query: 75 --SAQISSDLV---EQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQ 129
+A+I +D+V + CK G + +V ++ L+ L S +
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 130 FAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHD 187
++ L++M E +IN ++ F + A+ + A + M + I P I
Sbjct: 236 WSDASQLLSDMIEK---KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 188 FDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAML 246
++ L+ C + +A+Q F+ TY+ LI G+ K ELF+ M
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
+G D + Y + L G D A +F M+S V PD TYSI + C+ +
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
A V D M++ + +++ Y +I+ +CK KV++ ++L + L+GVKP+ +YN +
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
+ C + A L+ +M++D PD TYN +++ +R G DKA
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG--DKAA 518
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 134/274 (48%), Gaps = 1/274 (0%)
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
C+ N + + + D A +M+ I+ + F+ ++ LCK +HV A
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 206 QFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
F + ++ + TYS LIS G A +L M+++ +L+ +N +DA
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
K G EA + DM+ + ++PD FTY+ I+ +C + + A ++ + M + P++
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
TYN +IK CK+ +VE+ EL EM RG+ DT +Y + + A ++ +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 385 MEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
M D PD TY+++L L G+ +KA EV++
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 4/269 (1%)
Query: 148 INSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
I+ DIF + + + + D A + F M P + ++ L+ CK K V+
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 206 QFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
+ F + L+ TY+ LI G GD A+++F+ M+ G P D++ Y+ LD L
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
C G +++A +F M ++ D + Y+ I C A + + + + + PNV
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
TYN +I LC ++EAY LL +M G PD+ +YN + H + + + L+
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 385 MEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
M D T +V +L GR DK+
Sbjct: 526 MRSCRFVGDASTIGLVANML-HDGRLDKS 553
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 146/312 (46%), Gaps = 6/312 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAI--LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
G Q ++ ++ ++V G CK+ I ++ L +M E++ E + IF I + +
Sbjct: 145 GCQPNLVTYGVVVN--GLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSIL 225
D A+ F M+ GI+P + + L+ LC A Q D + T++ L
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I + K G +A +L M+ + D+ YN+ ++ C +D+A +F M+SK
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
PD TY+ I +C + + + +M L+ + TY +I+ L + + A +
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+ +M+ GV PD +Y+ + C++ ++ +AL + M+K D + Y +++ +
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 406 RIGRFDKATEVW 417
+ G+ D +++
Sbjct: 442 KAGKVDDGWDLF 453
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 128/271 (47%), Gaps = 3/271 (1%)
Query: 152 IFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD 209
IF F + A ++ D I +M GI ++ +++L+ C+R + A
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 210 QA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
+ K + + T S L++G+ A L M++ G D + + + L
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYN 328
EA + M+ + +P+ TY + ++ C DI AF +L+KM + +V +N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 329 CIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKD 388
II LCK V++A L EM +G++P+ +Y+++ + C + S A +L+S M +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 389 NCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
P+ T+N ++ ++ G+F +A ++ ++
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%)
Query: 211 AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
KS L + ++ L+S K+ L + M G +L YN ++ C+ +
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
A + M+ EP T S ++ YC I A ++D+M P+ T+ +
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
I L ++K EA L+D M+ RG +P+ +Y + C ++ A L+++ME
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 391 FPDRHTYNMVLKLLIRIGRFDKATEVWE 418
D +N ++ L + D A +++
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFK 209
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 35/169 (20%)
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK--- 336
M+ R P F ++ + + +KM+R + N++TYN +I C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 337 --------------------------------NDKVEEAYELLDEMILRGVKPDTWSYNA 364
++ +A L+D+M+ G +PDT ++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 365 IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+ H + S A+ L+ RM + C P+ TY +V+ L + G D A
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 169
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 152/318 (47%), Gaps = 12/318 (3%)
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEM-RESSCCEINSDIFWFIFKAYSRANL 165
I GF+ + + L+ G C +A WD ++ R+ +I D+ F A +
Sbjct: 275 IKGFKADIIIYTTLIR--GFC--YAGRWDDGAKLLRDMIKRKITPDVVAF--SALIDCFV 328
Query: 166 PDGAIRSF----LRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAK 220
+G +R M + GI P + L+ CK + +A D S +
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
T++ILI+G+ K ELF+ M +G D + YN + C+ G ++ A +F +M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+S+RV PD +Y I + CD + A + +K+ + + ++ YN II +C KV
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
++A++L + L+GVKPD +YN + C +S A L +ME+D P+ TYN++
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Query: 401 LKLLIRIGRFDKATEVWE 418
++ + G K+ ++ E
Sbjct: 569 IRAHLGEGDATKSAKLIE 586
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 144/312 (46%), Gaps = 2/312 (0%)
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
+ G H++ + I++ C++ ++ + + ++ + E ++ F +
Sbjct: 100 LKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGY-EPDTVTFSTLINGLCLEGRV 158
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSIL 225
A+ RM E G KPT+ + L+ LC V A D+ ++ F TY +
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPV 218
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
+ K G + A EL + M ++ +D + Y+ +D LCK G +D A N+F++M K
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+ D Y+ I +C A ++L M + + P+V ++ +I K K+ EA E
Sbjct: 279 KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
L EMI RG+ PDT +Y ++ C ++ +A ++ M C P+ T+N+++
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 406 RIGRFDKATEVW 417
+ D E++
Sbjct: 399 KANLIDDGLELF 410
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 112/245 (45%), Gaps = 1/245 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIG 233
RM E G +P + +L +CK A + + + + L A YSI+I G K G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
A LF M +G D++ Y + C G D+ + DM+ +++ PD +S
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I + + A + +M + + P+ TY +I CK +++++A +LD M+ +
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
G P+ ++N + +C + L L +M D TYN +++ +G+ + A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 414 TEVWE 418
E+++
Sbjct: 442 KELFQ 446
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 124/262 (47%), Gaps = 2/262 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
+ + + + N D A M G P I F++L+ CK + + F +
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 213 SHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
++ TY+ LI G+ ++G A+ELFQ M+ + D+++Y LD LC G +
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
+A IF + ++E D Y+I IH C+A+ + A+ + + + P+V TYN +I
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
LCK + EA L +M G P+ +YN + H + +++ +L+ +++
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594
Query: 392 PDRHTYNMVLKLLIRIGRFDKA 413
D T MV+ +L GR K+
Sbjct: 595 VDASTVKMVVDML-SDGRLKKS 615
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A +LFQ M L+ ++ + + D ++ M K + + +T SI I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
C + AF + K+ + P+ T++ +I LC +V EA EL+D M+ G KP
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ NA+ C + +VS A+ L+ RM + P+ TY VLK++ + G+ A E+
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 143/311 (45%), Gaps = 10/311 (3%)
Query: 112 HSVESFHILVEILGSCKQFAILWDFLTEMR----ESSCCEINSDIFWFIFKAYSRANLPD 167
H + +++IL+ Q ++ L +M E S ++S + Y
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS-----LLNGYCHGKRIS 172
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILI 226
A+ +M E G +P F L++ L +A D+ + TY +++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
+G K GD+ A L M D++ +N +D+LCK VD+A N+F +M +K +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P+ TYS I C A ++L M + PN+ T+N +I K K EA +L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
D+MI R + PD ++YN++ C H + +A ++ M +CFPD TYN ++K +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 407 IGRFDKATEVW 417
R + TE++
Sbjct: 413 SKRVEDGTELF 423
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 184/408 (45%), Gaps = 18/408 (4%)
Query: 17 TSVVCPLFQHKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQF-- 74
T+++ LF H + +L V P+LV+ VV + D +L+LN
Sbjct: 194 TTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVT--YGVVVNGLCKRGDTDLALNLLNK 250
Query: 75 --SAQISSDLV---EQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQ 129
+A+I +D+V + CK G + +V ++ L+ L S +
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 130 FAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHD 187
++ L++M E +IN ++ F + A+ + A + + M + I P I
Sbjct: 311 WSDASQLLSDMIEK---KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 188 FDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAML 246
++ L+ C + +A+Q F+ TY+ LI G+ K ELF+ M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
+G D + Y + L G D A +F M+S V PD TYSI + C+ +
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
A V D M++ + +++ Y +I+ +CK KV++ ++L + L+GVKP+ +YN +
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
+ C + A L+ +M++D P+ TYN +++ +R G DKA
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG--DKAA 593
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 136/274 (49%), Gaps = 1/274 (0%)
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
C+ N + + + D A+ +M+ I+ + F+ ++ LCK +HV A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 206 QFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
F + ++ + TYS LIS G A +L M+++ +L+ +N +DA
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
K G EA ++ DM+ + ++PD FTY+ ++ +C + + A ++ + M + P+V
Sbjct: 341 VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
TYN +IK CK+ +VE+ EL EM RG+ DT +Y + + A ++ +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 385 MEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
M D PD TY+++L L G+ +KA EV++
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 2/232 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKAREL 241
P + ++ L+ CK K V+ + F + L+ TY+ LI G GD A+++
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F+ M+ G P D++ Y+ LD LC G +++A +F M ++ D + Y+ I C
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
A + + + + + PNV TYN +I LC ++EAY LL +M G P++ +
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
YN + H + + + L+ M D T +V +L GR DK+
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 628
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 117/246 (47%), Gaps = 1/246 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIG 233
+M I ++ +++L+ C+R + A + K + + T S L++G+
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
A L M++ G D + + + L EA + M+ + +P+ TY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
+ ++ C D A +L+KM + +V +N II LCK V++A L EM +
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
G++P+ +Y+++ + C + S A +L+S M + P+ T+N ++ ++ G+F +A
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 414 TEVWEN 419
+++++
Sbjct: 350 EKLYDD 355
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A LF M+ ++ +N L A+ K D ++ M + +TY+I I+
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + I A +L KM + P++ T + ++ C ++ +A L+D+M+ G +P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
DT ++ + H + S A+ L+ RM + C P+ TY +V+ L + G D A
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 123/243 (50%), Gaps = 1/243 (0%)
Query: 178 EFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSG 236
+ G +P F+ L+ L V +A D+ ++ TY+ +++G + GD+
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
A +L + M ++ D+ Y+ +D+LC+ GC+D A ++F +M +K ++ TY+ +
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
C A + +L M ++PNV T+N ++ K K++EA EL EMI RG+
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
P+ +YN + +C +S A ++ M ++ C PD T+ ++K + R D +V
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 417 WEN 419
+ N
Sbjct: 391 FRN 393
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 145/314 (46%), Gaps = 8/314 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILW-DFLTEMRESSCCEINSDIFWF--IFKAYSRANL 165
G + SV +++ LV G CK A W D +++ EI ++ F + + +
Sbjct: 258 GIKSSVVTYNSLVR--GLCK--AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAKTYSI 224
A + M GI P I ++ L+ C + + +A D ++ T++
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI G+ + ++F+ + +G + + Y+ + C+ G + A +F +M+S
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
V PD TY I + CD + A + + +++ + + Y II+ +CK KVE+A+
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
L + +GVKP+ +Y + + C +S A L+ +ME+D P+ TYN +++
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 405 IRIGRFDKATEVWE 418
+R G + ++ E
Sbjct: 554 LRDGDLTASAKLIE 567
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 146/315 (46%), Gaps = 8/315 (2%)
Query: 109 GFQHSVESFHILVEIL---GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANL 165
G++ +F+ L++ L G + +L D + E + C+ + + I R+
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE----NGCQPDVVTYNSIVNGICRSGD 208
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSI 224
A+ +M+E +K + + ++ LC+ + A F + ++ + ++ TY+
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
L+ G K G L + M+ + +++ +N LD K G + EA ++ +M+++
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+ P+ TY+ + YC N + A +LD M R P++ T+ +IK C +V++
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
++ + RG+ + +Y+ + C ++ A L M PD TY ++L L
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 405 IRIGRFDKATEVWEN 419
G+ +KA E++E+
Sbjct: 449 CDNGKLEKALEIFED 463
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 1/224 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGKAREL 241
P I F L+ C K V + F + +K + A TYSIL+ G+ + G A EL
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
FQ M+ G D++ Y LD LC G +++A IF D+ +++ Y+ I C
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
+ A+ + + + PNV TY +I LCK + EA LL +M G P+ +
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
YN + H +++ + +L+ M+ D + MV+ +L+
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%)
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
D+A +F +M+ R P +S F + ++ + N++T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
I C+ K AY +L +++ G +PDT ++N + +VS A+ L+ RM ++ C
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 391 FPDRHTYNMVLKLLIRIG 408
PD TYN ++ + R G
Sbjct: 190 QPDVVTYNSIVNGICRSG 207
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 161/349 (46%), Gaps = 18/349 (5%)
Query: 71 LNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQF 130
LN+ S + S V+ VL + + + FF WAK+ HS+E+ I++ L ++F
Sbjct: 72 LNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKF 131
Query: 131 ----AILWDFLTE-------------MRESSCCEINSDIFWFIFKAYSRANLPDGAIRSF 173
+IL D L + C+ +F +FK ++ A +F
Sbjct: 132 KSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTF 191
Query: 174 LRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILISGWGKI 232
++M ++G PT+ + + L + V A +F+ + + T ++++SG+ +
Sbjct: 192 MQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRS 251
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
G K EL Q M G ++YN + C+ G + A + + M ++P+ T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
+ IH +C A + A +V +M+ N+ PN TYN +I + E A+ ++M+
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
G++ D +YNA+ C + +A + + ++K+N P+ T++ ++
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 95/191 (49%), Gaps = 1/191 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILISGWGKIGD 234
M + G++P + F+ L++ C+ +++A + F + K+ + TY+ LI+G+ + GD
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
A ++ M+ G D+L YN + LCK +A ++ + + P++ T+S
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I C + F + M R PN T+N ++ C+N+ + A ++L EM+ R
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 355 VKPDTWSYNAI 365
+ D+ + + +
Sbjct: 479 IPLDSRTVHQV 489
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%)
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
AT+ F M P + + ++ + + A R +MRRC + PN +T N ++
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP 392
C++ K+++ ELL +M G + SYN + A HC+ +S AL+L + M K P
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 306
Query: 393 DRHTYNMVLKLLIRIGRFDKATEVW 417
+ T+N ++ R + +A++V+
Sbjct: 307 NVVTFNTLIHGFCRAMKLQEASKVF 331
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 161/349 (46%), Gaps = 18/349 (5%)
Query: 71 LNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQF 130
LN+ S + S V+ VL + + + FF WAK+ HS+E+ I++ L ++F
Sbjct: 72 LNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKF 131
Query: 131 ----AILWDFLTE-------------MRESSCCEINSDIFWFIFKAYSRANLPDGAIRSF 173
+IL D L + C+ +F +FK ++ A +F
Sbjct: 132 KSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTF 191
Query: 174 LRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILISGWGKI 232
++M ++G PT+ + + L + V A +F+ + + T ++++SG+ +
Sbjct: 192 MQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRS 251
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
G K EL Q M G ++YN + C+ G + A + + M ++P+ T+
Sbjct: 252 GKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTF 311
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
+ IH +C A + A +V +M+ N+ PN TYN +I + E A+ ++M+
Sbjct: 312 NTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVC 371
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
G++ D +YNA+ C + +A + + ++K+N P+ T++ ++
Sbjct: 372 NGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 95/191 (49%), Gaps = 1/191 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILISGWGKIGD 234
M + G++P + F+ L++ C+ +++A + F + K+ + TY+ LI+G+ + GD
Sbjct: 299 MGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
A ++ M+ G D+L YN + LCK +A ++ + + P++ T+S
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I C + F + M R PN T+N ++ C+N+ + A ++L EM+ R
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 355 VKPDTWSYNAI 365
+ D+ + + +
Sbjct: 479 IPLDSRTVHQV 489
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%)
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
AT+ F M P + + ++ + + A R +MRRC + PN +T N ++
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMS 246
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP 392
C++ K+++ ELL +M G + SYN + A HC+ +S AL+L + M K P
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQP 306
Query: 393 DRHTYNMVLKLLIRIGRFDKATEVW 417
+ T+N ++ R + +A++V+
Sbjct: 307 NVVTFNTLIHGFCRAMKLQEASKVF 331
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKR-KHVKQAQQFFDQAKSHFLLTAKTYSIL 225
D A+R M + P L+ LCK KH K + +F F++ +T + L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
+ G + G +A + + +L +GC +D ++YN + C +DEA +M+ + +
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+PD +TYSI I + N + A + D +R +LP+V+TY+ +I CK ++ EE E
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
DEM+ + V+P+T YN + +C +S AL L M+ P+ TY ++K +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 406 RIGRFDKATEVWE 418
I R ++A ++E
Sbjct: 692 IISRVEEAKLLFE 704
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 145 CCEINSDIFWFI--FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVK 202
C ++ D++ F A+ + + A++ F +M+E G+ P + F+ ++ L
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 203 QAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFL 261
+A F ++ + T TYSIL+ G + G A + + M +G P +++ YNN +
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 262 DALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLL 321
D+ + G +++A I M+SK + + TY+ I YC +A R+L +M
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 322 PNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRL 381
N ++ +I LC + + A + EM+LR + P + + C H + S+AL L
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 382 MSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+ D T N +L L G+ D+A
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 27/288 (9%)
Query: 115 ESFHILVEILG-SCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSF 173
E+F I EILG C + ++ L S CC + L + +F
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLI----SGCC--------------GKKKLDE----AF 560
Query: 174 LRMDEF---GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGW 229
+ +DE G+KP + + +L+ L V++A QF+D K + +L TYS++I G
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 230 GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDA 289
K + + +E F M+ + + + YN+ + A C+ G + A + DM K + P++
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 290 FTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDE 349
TY+ I + + A + ++MR L PNVF Y +I K ++ + LL E
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 350 MILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
M + V P+ +Y + + V+ A RL++ M + PD TY
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 1/230 (0%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAML 246
++ L+ C +K + +A F D+ K TYSILI G + +A + +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
G D+ Y+ +D CK +E F +M+SK V+P+ Y+ I YC + +
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
A + + M+ + PN TY +IK + +VEEA L +EM + G++P+ + Y A+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ ++ + L+ M N P++ TY +++ R G +A+ +
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 13/261 (4%)
Query: 170 IRSFLRMDEF------------GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL 217
+ S +R +EF G+ P ++ F + CK V++A + F + + +
Sbjct: 233 LTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA 292
Query: 218 -TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNI 276
T++ +I G G G +A + M+++G L+ Y+ + L + + +A +
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
+M K P+ Y+ I ++ +A ++ A + D M L TYN +IK CK
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 337 NDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
N + + A LL EM+ G + S+ ++ C H ALR + M N P
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 397 YNMVLKLLIRIGRFDKATEVW 417
++ L + G+ KA E+W
Sbjct: 473 LTTLISGLCKHGKHSKALELW 493
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A ++F + ++G N L +L + + F D++ K V PD + ++ I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + A ++ KM + PNV T+N +I L + +EA+ ++M+ RG++P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+Y+ + + A ++ M K P+ YN ++ I G +KA E+
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 109 GFQHSVESFHILVEILGSCK--QFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
G V ++ ++++ G CK + +F EM S + N+ ++ + +AY R+
Sbjct: 605 GMLPDVYTYSVMID--GCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSIL 225
A+ M GI P + L+ + V++A+ F++ + L Y+ L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G+GK+G K L + M + + + Y + + G V EA+ + ++M K +
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
PD+ TY FI+ Y + AF+ D+
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKR-KHVKQAQQFFDQAKSHFLLTAKTYSIL 225
D A+R M + P L+ LCK KH K + +F F++ +T + L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
+ G + G +A + + +L +GC +D ++YN + C +DEA +M+ + +
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+PD +TYSI I + N + A + D +R +LP+V+TY+ +I CK ++ EE E
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
DEM+ + V+P+T YN + +C +S AL L M+ P+ TY ++K +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 406 RIGRFDKATEVWE 418
I R ++A ++E
Sbjct: 692 IISRVEEAKLLFE 704
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 145 CCEINSDIFWFI--FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVK 202
C ++ D++ F A+ + + A++ F +M+E G+ P + F+ ++ L
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 203 QAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFL 261
+A F ++ + T TYSIL+ G + G A + + M +G P +++ YNN +
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 262 DALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLL 321
D+ + G +++A I M+SK + + TY+ I YC +A R+L +M
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 322 PNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRL 381
N ++ +I LC + + A + EM+LR + P + + C H + S+AL L
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 382 MSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+ D T N +L L G+ D+A
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 27/288 (9%)
Query: 115 ESFHILVEILG-SCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSF 173
E+F I EILG C + ++ L S CC + L + +F
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLI----SGCC--------------GKKKLDE----AF 560
Query: 174 LRMDEF---GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGW 229
+ +DE G+KP + + +L+ L V++A QF+D K + +L TYS++I G
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 230 GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDA 289
K + + +E F M+ + + + YN+ + A C+ G + A + DM K + P++
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 290 FTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDE 349
TY+ I + + A + ++MR L PNVF Y +I K ++ + LL E
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE 740
Query: 350 MILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
M + V P+ +Y + + V+ A RL++ M + PD TY
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 1/230 (0%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAML 246
++ L+ C +K + +A F D+ K TYSILI G + +A + +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
G D+ Y+ +D CK +E F +M+SK V+P+ Y+ I YC + +
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
A + + M+ + PN TY +IK + +VEEA L +EM + G++P+ + Y A+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ ++ + L+ M N P++ TY +++ R G +A+ +
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 13/261 (4%)
Query: 170 IRSFLRMDEF------------GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL 217
+ S +R +EF G+ P ++ F + CK V++A + F + + +
Sbjct: 233 LTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVA 292
Query: 218 -TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNI 276
T++ +I G G G +A + M+++G L+ Y+ + L + + +A +
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
+M K P+ Y+ I ++ +A ++ A + D M L TYN +IK CK
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 337 NDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
N + + A LL EM+ G + S+ ++ C H ALR + M N P
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 397 YNMVLKLLIRIGRFDKATEVW 417
++ L + G+ KA E+W
Sbjct: 473 LTTLISGLCKHGKHSKALELW 493
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A ++F + ++G N L +L + + F D++ K V PD + ++ I+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + A ++ KM + PNV T+N +I L + +EA+ ++M+ RG++P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+Y+ + + A ++ M K P+ YN ++ I G +KA E+
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 109 GFQHSVESFHILVEILGSCK--QFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
G V ++ ++++ G CK + +F EM S + N+ ++ + +AY R+
Sbjct: 605 GMLPDVYTYSVMID--GCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSIL 225
A+ M GI P + L+ + V++A+ F++ + L Y+ L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G+GK+G K L + M + + + Y + + G V EA+ + ++M K +
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
PD+ TY FI+ Y + AF+ D+
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 167/347 (48%), Gaps = 5/347 (1%)
Query: 74 FSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAIL 133
F +S V ++LK KN +A F A PG+ HS +H ++ L + +
Sbjct: 4 FPKSLSPKHVLKLLKSEKN-PRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHV 62
Query: 134 WDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE-FGIKPTIHDFDMLL 192
+ E+ S C+ + D+ + K Y + ++PD A+ F RM E FG +P I ++ LL
Sbjct: 63 -SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL 121
Query: 193 YFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCP 251
+ K + + F ++ + +TY++LI K + KAR M +G
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 181
Query: 252 VDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRV 311
D+ +Y+ ++ L K G +D+A +F +M + V PD Y+I I + D +A +
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 312 LDKM-RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
D++ ++ PNV T+N +I L K +V++ ++ + M + D ++Y+++ C
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
D V +A + + +++ D TYN +L R G+ ++ E+W
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 145/345 (42%), Gaps = 37/345 (10%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G V ++IL++ K + + E S N + S+ D
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILIS 227
++ + RM + + ++ + L++ LC +V +A+ F++ + + TY+ ++
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ + G ++ EL++ M + V++++YN + L + G +DEAT I+ M +K
Sbjct: 334 GFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D TY IFIH C ++ A V+ ++ +V+ Y II LCK ++EEA L+
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 348 DEMILRGV-----------------------------------KPDTWSYNAIQAHHCDH 372
EM GV +P SYN + C
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ A + M ++ PD TY+++L L R + D A E+W
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELW 557
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 1/231 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGD 234
M + G++ H + L+ L + + +A F + K+ T +Y+ILI G K G
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
G+A + ML+ G DL Y+ L LC+ +D A ++H L +E D ++I
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
IH C + A V+ M N N+ TYN +++ K A + M G
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
++PD SYN I C VS A+ FP +T+N++++ ++
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 2/196 (1%)
Query: 225 LISGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
+I +GK +A ++F+ M + GC + +YN L+A + + ++F +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
V P+ TY++ I C + A LD M + P+VF+Y+ +I L K K+++A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR-MEKDNCFPDRHTYNMVLK 402
EL DEM RGV PD YN + + A+ L R +E + +P+ T+N+++
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 403 LLIRIGRFDKATEVWE 418
L + GR D ++WE
Sbjct: 264 GLSKCGRVDDCLKIWE 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 114/270 (42%), Gaps = 36/270 (13%)
Query: 184 TIHDFDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAKTYSILISGWGKIGDSGKARELF 242
I +++L+ L + + +A + + TY I I G G KA +
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE---------------- 286
Q + G +D+ AY + +D LCK ++EA+N+ +M VE
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 287 -------------------PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
P +Y+I I C A A + +M P++ TY
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
+ ++ LC++ K++ A EL + + G++ D +N + C ++ A+ +M+ ME
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 388 DNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
NC + TYN +++ ++G ++AT +W
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
Query: 185 IHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQ 243
++ + ++ LCK+K +++A + H + L + + LI G + G+A +
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Query: 244 AMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAN 303
M GC +++YN + LCK G EA+ +ML +PD TYSI + C
Sbjct: 489 EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 304 DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYN 363
I A + + + L +V +N +I LC K+++A ++ M R + +YN
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608
Query: 364 AIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+ + +RA + M K PD +YN ++K L
Sbjct: 609 TLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 114/286 (39%), Gaps = 54/286 (18%)
Query: 48 DLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSI 107
+LV E+S+ H +EL+ + +A I L R LG ++ FFL
Sbjct: 450 NLVKEMSK---------HGVELNSHVCNALIGG------LIRDSRLGEAS--FFLREMGK 492
Query: 108 PGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPD 167
G + +V S++IL+ L +F F+ EM E+
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN------------------------ 528
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILI 226
G KP + + +LL LC+ + + A + + Q +S ++ILI
Sbjct: 529 ------------GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
G +G A + M + C +L+ YN ++ K G + AT I+ M ++
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
PD +Y+ + C + A D R + P V+T+N +++
Sbjct: 637 PDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 140/312 (44%), Gaps = 6/312 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G H + ++ I + Q ++ L +M + DI + Y +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG---YEPDIVTLSSLLNGYCHSKRI 169
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSIL 225
A+ +M E G KP F L++ L +A DQ + TY +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
++G K GD A L + M D++ YN +D LCK +D+A N+F +M +K +
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
PD FTYS I C+ A R+L M + PNV T++ +I K K+ EA +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
L DEMI R + PD ++Y+++ C H + A + M +CFP+ TY+ ++K
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 406 RIGRFDKATEVW 417
+ R ++ E++
Sbjct: 410 KAKRVEEGMELF 421
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 180/408 (44%), Gaps = 12/408 (2%)
Query: 17 TSVVCPLFQHKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSL--NQF 74
T+++ LF H + +L V PDLV+ + V + DL LSL
Sbjct: 192 TTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 75 SAQISSDLV---EQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFA 131
+I +D+V + CK G + V ++ L+ L + +++
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 132 ILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFD 189
L++M E +IN ++ F + A+ + A + + M + I P I +
Sbjct: 311 DASRLLSDMIER---KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 190 MLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQ 248
L+ C + +A+ F+ S TYS LI G+ K + ELF+ M +
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 249 GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSA 308
G + + Y + + D A +F M+S V P+ TY+I + C + A
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 309 FRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAH 368
V + ++R + P+++TYN +I+ +CK KVE+ +EL + L+GV P+ +YN + +
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Query: 369 HCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
C A L+ +M++D P+ TYN +++ +R G + + E+
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 144/313 (46%), Gaps = 4/313 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAI-LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPD 167
G Q + ++ +V G CK+ I L L + E E + I+ I + D
Sbjct: 218 GCQPDLVTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILI 226
A+ F MD GI+P + + L+ LC A + D + T+S LI
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
+ K G +A +L+ M+ + D+ Y++ ++ C +DEA ++F M+SK
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P+ TYS I +C A + + +M + L+ N TY +I + + A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
+M+ GV P+ +YN + C + ++++A+ + +++ PD +TYN++++ + +
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 407 IGRFDKATEVWEN 419
G+ + E++ N
Sbjct: 516 AGKVEDGWELFCN 528
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
F D KS + ++ L+S K+ L + M G DL Y+ F++ C+
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
+ A + M+ EPD T S ++ YC + I A ++D+M P+ FT
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+ +I L ++K EA L+D+M+ RG +PD +Y + C ++ AL L+ +ME
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
K D YN ++ L + D A ++
Sbjct: 251 KGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A +LF M+ ++ +N L A+ K + ++ M + + D +TYSIFI+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + + A VL KM + P++ T + ++ C + ++ +A L+D+M+ G KP
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
DT+++ + H + S A+ L+ +M + C PD TY V+ L + G D A
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 36/204 (17%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKAREL 241
P + + L+ CK K V++ + F + L+ TY+ LI G+ + D A+ +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F+ M+ G ++L YN LD LCK G + +A +F + +EPD +TY+I I C
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 302 ANDIHSAFRV-----------------------------------LDKMRRCNLLPNVFT 326
A + + + L KM+ LPN T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 327 YNCIIKRLCKNDKVEEAYELLDEM 350
YN +I+ ++ E + EL+ EM
Sbjct: 576 YNTLIRARLRDGDREASAELIKEM 599
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 2/223 (0%)
Query: 113 SVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRS 172
+V ++ L++ K+ + EM + N+ + + + +A D A
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNAQMV 455
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGK 231
F +M G+ P I +++LL LCK + +A F+ +S TY+I+I G K
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
G ELF + +G +++AYN + C+ G +EA ++ M P++ T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
Y+ I D ++ ++ +MR C + T + L
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 151/316 (47%), Gaps = 11/316 (3%)
Query: 109 GFQHSVESFHILVEILGSCKQFAI--LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
GF+ ++ +F L++ G CK+ +I ++ L EM + + N + +
Sbjct: 282 GFKPNLINFTSLID--GLCKKGSIKQAFEMLEEMVRNGW-KPNVYTHTALIDGLCKRGWT 338
Query: 167 DGAIRSFLRM---DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTY 222
+ A R FL++ D + KP +H + ++ CK + +A+ F + K L TY
Sbjct: 339 EKAFRLFLKLVRSDTY--KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Query: 223 SILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS 282
+ LI+G K G G+A EL M D+G ++ YN +D+LCK EA + + S
Sbjct: 397 TTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 456
Query: 283 KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEE 342
+E D TY+I I C NDI+ A +M + ++ N +I C+ K++E
Sbjct: 457 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 516
Query: 343 AYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
+ L ++ G+ P +Y ++ + +C ++ AL+ M++ C PD TY ++
Sbjct: 517 SERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576
Query: 403 LLIRIGRFDKATEVWE 418
L + D+A +++E
Sbjct: 577 GLCKKSMVDEACKLYE 592
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 151 DIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ 210
++ + + +S + A+ + M G+ P+ + +L + ++ A+ FD+
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 211 AKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGC 269
++ + +Y +++ G + G +A M+ +G D L ALC+ G
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 270 VDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNC 329
V+ A F M+ +P+ ++ I C I AF +L++M R PNV+T+
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 330 IIKRLCKNDKVEEAYELLDEMILRGV-KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKD 388
+I LCK E+A+ L +++ KP+ +Y ++ +C +++RA L SRM++
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 389 NCFPDRHTYNMVLKLLIRIGRFDKATEV 416
FP+ +TY ++ + G F +A E+
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGD 234
M + G P I+ ++ + LCK+ +A + ++A S L TY+ILI K D
Sbjct: 419 MGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQND 478
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
+A F M G D+ N + A C+ + E+ +F ++S + P TY+
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I YC DI A + M+R +P+ FTY +I LCK V+EA +L + MI RG
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
+ P + + +C + + A+ L+ ++K
Sbjct: 599 LSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK 631
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%)
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
G ++EA + DM ++ + P + T + + + I A V D+M ++P+ +Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
++ ++ K++EA L MI RG PD + I C++ V+RA+ +M
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 388 DNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
P+ + ++ L + G +A E+ E
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLE 311
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 153/361 (42%), Gaps = 61/361 (16%)
Query: 96 SAHRFFLWAKSIPGFQHSVESFHILVEIL--------------------GSCKQFAILWD 135
+A F W IP F+H+V S+ LV +L S + + D
Sbjct: 42 TALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVD 101
Query: 136 FLTEMRESSCCEINSDI----FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDML 191
F MR+ EI + + + + +R L + R + M E + P I+ F+ L
Sbjct: 102 FCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTL 161
Query: 192 LYFLCKRKHVKQAQQFFD---QA---KSHFLLTA-------------------------- 219
+ CK +V +A+Q+ QA +F T+
Sbjct: 162 VNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGC 221
Query: 220 ----KTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
+Y+ LI G + +A L M D C ++ Y +DALC G EA N
Sbjct: 222 HRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMN 281
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
+F M ++PD Y++ I ++C + + A +L+ M L+PNV TYN +IK C
Sbjct: 282 LFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC 341
Query: 336 KNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRH 395
K + V +A LL +M+ + + PD +YN + A C + A RL+S ME+ P++
Sbjct: 342 KKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQR 400
Query: 396 T 396
T
Sbjct: 401 T 401
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 22/320 (6%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMR----ESSCCEINSDIFWFIFKAYSRAN 164
G H++ ++ IL+ Q ++ L +M E +NS + + N
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS-----LLNGFCHGN 165
Query: 165 LPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK---- 220
A+ +M E G +P F+ L++ L + +A D+ + K
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDR------MVVKGCQP 219
Query: 221 ---TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
TY I+++G K GD A L + M ++ YN +DALC V++A N+F
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+M +K + P+ TY+ I C+ A R+L M + PNV T++ +I K
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
K+ EA +L DEMI R + PD ++Y+++ C H + A + M +CFP+ TY
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 398 NMVLKLLIRIGRFDKATEVW 417
N ++K + R D+ E++
Sbjct: 400 NTLIKGFCKAKRVDEGMELF 419
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 148/309 (47%), Gaps = 8/309 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G + +V +++ L+ L + +++ L++M E +IN ++ F + A+ +
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER---KINPNVVTFSALIDAFVKEGKL 342
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSIL 225
A + + M + I P I + L+ C + +A+ F+ S TY+ L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G+ K + ELF+ M +G + + Y + + D A +F M+S V
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
PD TYSI + C+ + +A V + ++R + P+++TYN +I+ +CK KVE+ ++
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
L + L+GVKP+ +Y + + C A L M+++ PD TYN +++ +
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Query: 406 RIGRFDKAT 414
R G DKA
Sbjct: 583 RDG--DKAA 589
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 11/279 (3%)
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
C+ + + + + D A+ +M++ I+P + ++ ++ LC K+V A
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 206 QFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
F + + + TY+ LI G A L M+++ +++ ++ +DA
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
K G + EA ++ +M+ + ++PD FTYS I+ +C + + A + + M + PNV
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI-----QAHHCDHCEVSRAL 379
TYN +IK CK +V+E EL EM RG+ +T +Y + QA CD+ ++
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI---- 452
Query: 380 RLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ +M D PD TY+++L L G+ + A V+E
Sbjct: 453 -VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 145/313 (46%), Gaps = 4/313 (1%)
Query: 107 IPGFQHSVESFHILVEILGSCKQFAI-LWDFLTEMRESSCCEINSDIFWFIFKAYSRANL 165
+ G Q + ++ I+V G CK+ I L L + E E I+ I A
Sbjct: 214 VKGCQPDLVTYGIVVN--GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSI 224
+ A+ F MD GI+P + ++ L+ LC A + D + T+S
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI + K G +A +L+ M+ + D+ Y++ ++ C +DEA ++F M+SK
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
P+ TY+ I +C A + + +M + L+ N TY +I + + + A
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+ +M+ GV PD +Y+ + C++ +V AL + +++ PD +TYN++++ +
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 405 IRIGRFDKATEVW 417
+ G+ + +++
Sbjct: 512 CKAGKVEDGWDLF 524
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 2/232 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKAREL 241
P + ++ L+ CK K V + + F + L+ TY+ LI G+ + + A+ +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F+ M+ G D++ Y+ LD LC G V+ A +F + ++EPD +TY+I I C
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
A + + + + + PNV TY ++ C+ EEA L EM G PD+ +
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
YN + H + + + L+ M D T +V +L GR DK+
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML-HDGRLDKS 624
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
F D KS + +S L+S K+ L + M + G +L Y+ ++ C+
Sbjct: 69 FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCR 128
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
+ A + M+ EPD T + ++ +C N I A ++ +M P+ FT
Sbjct: 129 RSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFT 188
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+N +I L ++++ EA L+D M+++G +PD +Y + C ++ AL L+ +ME
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Query: 387 KDNCFPDRHTYNMVLKLL 404
+ P YN ++ L
Sbjct: 249 QGKIEPGVVIYNTIIDAL 266
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A LF M+ ++ ++ L A+ K D ++ M + + + +TYSI I+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + + A VL KM + P++ T N ++ C +++ +A L+ +M+ G +P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
D++++N + H S A+ L+ RM C PD TY +V+ L + G D A
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 135/267 (50%), Gaps = 2/267 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRK-HVKQAQQFFDQA 211
F + AY R+ L + AI F M E+G++P + ++ ++ K KQ +FFD+
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 212 KSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
+ + + + T++ L++ + G AR LF M ++ D+ +YN LDA+CKGG +
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
D A I M KR+ P+ +YS I + A A + +MR + + +YN +
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
+ K + EEA ++L EM G+K D +YNA+ + + ++ + M++++
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHV 510
Query: 391 FPDRHTYNMVLKLLIRIGRFDKATEVW 417
P+ TY+ ++ + G + +A E++
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 139/309 (44%), Gaps = 3/309 (0%)
Query: 109 GFQHSVESFHILVEILGSCK-QFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPD 167
G + ++ +++ +++ G +F + F EM+ + + + F + SR L +
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGV-QPDRITFNSLLAVCSRGGLWE 356
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILI 226
A F M I+ + ++ LL +CK + A + Q + +YS +I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
G+ K G +A LF M G +D ++YN L K G +EA +I +M S ++
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
D TY+ + Y +V +M+R ++LPN+ TY+ +I K +EA E+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
E G++ D Y+A+ C + V A+ L+ M K+ P+ TYN ++ R
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Query: 407 IGRFDKATE 415
D++ +
Sbjct: 597 SATMDRSAD 605
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 37/264 (14%)
Query: 191 LLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQG 249
++ L + V A++ F+ A + T +S LIS +G+ G +A +F +M + G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 250 CPVDLLAYNNFLDALCKGGC--------VDE----------------------------A 273
+L+ YN +DA KGG DE A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 274 TNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
N+F +M ++R+E D F+Y+ + C + AF +L +M ++PNV +Y+ +I
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 334 LCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
K + +EA L EM G+ D SYN + + + AL ++ M D
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 394 RHTYNMVLKLLIRIGRFDKATEVW 417
TYN +L + G++D+ +V+
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVF 502
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
K S +IS G+ G A+ +F+ G + A++ + A + G +EA ++F+
Sbjct: 233 GKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFN 292
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDAN-DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
M + P+ TY+ I + + D+M+R + P+ T+N ++ +
Sbjct: 293 SMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
E A L DEM R ++ D +SYN + C ++ A ++++M P+ +Y
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 398 NMVLKLLIRIGRFDKA 413
+ V+ + GRFD+A
Sbjct: 413 STVIDGFAKAGRFDEA 428
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 168/362 (46%), Gaps = 13/362 (3%)
Query: 60 HRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHI 119
+R P D +L S ++ + +V+K+ N RF+ +++ +HS ++++
Sbjct: 51 YRVP--DSDLCFCYLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNL 108
Query: 120 LVEILGSCKQFAILWDFLTEMRE---SSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRM 176
L L CK A L D +M E S N+ + F+ +++ A + L +
Sbjct: 109 LTRSL--CK--AGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA--TALLL 162
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDS 235
F ++ + LL L K V+ A + FD+ + KT++ILI G +G +
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV-EPDAFTYSI 294
KA EL M GC D++ YN + CK +++A+ +F D+ S V PD TY+
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I YC A + A +LD M R + P T+N ++ K ++ A E+ +MI G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
PD ++ ++ +C +VS+ RL M FP+ TY++++ L R KA
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 415 EV 416
E+
Sbjct: 403 EL 404
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 185/417 (44%), Gaps = 12/417 (2%)
Query: 3 KMAFRSLFSRYKNLTSVVCPLFQHKQNCHHFHSLPTPQVF--NPLLPDLVSEISRVVSDH 60
K+ R F Y LT +C H F + + V N LL LVS + +
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA----EK 151
Query: 61 RHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQ--HSVESFH 118
H L L F + +V +L L L+ + + FQ + ++F+
Sbjct: 152 GKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLR-FQSCNDTKTFN 210
Query: 119 ILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE 178
IL+ L + + L M C E + + + + + ++N + A F +
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSGFGC-EPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 179 FGI-KPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSG 236
+ P + + ++ CK +++A D + T T+++L+ G+ K G+
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
A E+ M+ GC D++ + + +D C+ G V + ++ +M ++ + P+AFTYSI I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
+ C+ N + A +L ++ +++P F YN +I CK KV EA +++EM + K
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
PD ++ + HC + A+ + +M C PD+ T + +L L++ G +A
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 153 FWFIFKAYSRAN--LPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ 210
F + Y++A L IR +M FG P + F L+ C+ V Q + +++
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRG--KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 211 AKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGC 269
+ + A TYSILI+ KAREL + + YN +D CK G
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 270 VDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNC 329
V+EA I +M K+ +PD T++I I +C + A + KM P+ T +
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 330 IIKRLCKNDKVEEAYEL 346
++ L K +EAY L
Sbjct: 493 LLSCLLKAGMAKEAYHL 509
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
YN +LCK G D A +F M S V P+ + ++ + +H A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 316 RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEV 375
+ + N ++ L K D+VE+A +L DE + DT ++N + C +
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+AL L+ M C PD TYN +++ + +KA+E++++
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD 266
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 168/362 (46%), Gaps = 13/362 (3%)
Query: 60 HRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHI 119
+R P D +L S ++ + +V+K+ N RF+ +++ +HS ++++
Sbjct: 51 YRVP--DSDLCFCYLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNL 108
Query: 120 LVEILGSCKQFAILWDFLTEMRE---SSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRM 176
L L CK A L D +M E S N+ + F+ +++ A + L +
Sbjct: 109 LTRSL--CK--AGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA--TALLL 162
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDS 235
F ++ + LL L K V+ A + FD+ + KT++ILI G +G +
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV-EPDAFTYSI 294
KA EL M GC D++ YN + CK +++A+ +F D+ S V PD TY+
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I YC A + A +LD M R + P T+N ++ K ++ A E+ +MI G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
PD ++ ++ +C +VS+ RL M FP+ TY++++ L R KA
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 415 EV 416
E+
Sbjct: 403 EL 404
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 185/417 (44%), Gaps = 12/417 (2%)
Query: 3 KMAFRSLFSRYKNLTSVVCPLFQHKQNCHHFHSLPTPQVF--NPLLPDLVSEISRVVSDH 60
K+ R F Y LT +C H F + + V N LL LVS + +
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA----EK 151
Query: 61 RHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQ--HSVESFH 118
H L L F + +V +L L L+ + + FQ + ++F+
Sbjct: 152 GKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLR-FQSCNDTKTFN 210
Query: 119 ILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE 178
IL+ L + + L M C E + + + + + ++N + A F +
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSGFGC-EPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 179 FGI-KPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSG 236
+ P + + ++ CK +++A D + T T+++L+ G+ K G+
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
A E+ M+ GC D++ + + +D C+ G V + ++ +M ++ + P+AFTYSI I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
+ C+ N + A +L ++ +++P F YN +I CK KV EA +++EM + K
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
PD ++ + HC + A+ + +M C PD+ T + +L L++ G +A
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 153 FWFIFKAYSRAN--LPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ 210
F + Y++A L IR +M FG P + F L+ C+ V Q + +++
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRG--KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 211 AKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGC 269
+ + A TYSILI+ KAREL + + YN +D CK G
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 270 VDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNC 329
V+EA I +M K+ +PD T++I I +C + A + KM P+ T +
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 330 IIKRLCKNDKVEEAYEL 346
++ L K +EAY L
Sbjct: 493 LLSCLLKAGMAKEAYHL 509
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
YN +LCK G D A +F M S V P+ + ++ + +H A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 316 RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEV 375
+ + N ++ L K D+VE+A +L DE + DT ++N + C +
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+AL L+ M C PD TYN +++ + +KA+E++++
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD 266
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 178/401 (44%), Gaps = 20/401 (4%)
Query: 31 HHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISS-------DLV 83
+ F +L Q NP++ +S + +LE ++ F I S D
Sbjct: 14 NKFLNLCLLQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFS 73
Query: 84 EQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMR-- 141
+ + K K+ + + G H + S++I++ L C +F I + +M
Sbjct: 74 KVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKF 133
Query: 142 --ESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRK 199
E ++S + + + N AI +M+E G +P + ++ ++ CK
Sbjct: 134 GYEPDVVTVSS-----LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 200 HVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYN 258
V A + FD+ + + A TY+ L++G G A L + M+ + +++ +
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 259 NFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
+D K G EA ++ +M + V+PD FTY+ I+ C + A ++LD M
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
LP+V TYN +I CK+ +V+E +L EM RG+ DT +YN I + A
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 379 LRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ SRM+ P+ TY+++L L R +KA ++EN
Sbjct: 369 QEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 4/225 (1%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAKTYSILIS 227
A++ + M + P + ++ L+ LC V +A+Q D L TY+ LI+
Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN 322
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ K + +LF+ M +G D + YN + + G D A IF M S+ P
Sbjct: 323 GFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---P 379
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ TYSI ++ C + A + + M++ + ++ TYN +I +CK VE+A++L
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP 392
+ +G+KPD SY + + C + ++ L +M++D P
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 4/234 (1%)
Query: 181 IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKAR 239
I P + F ++ K +A + +++ + TY+ LI+G G +A+
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
++ M+ +GC D++ YN ++ CK VDE T +F +M + + D TY+ I Y
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
A +A + +M + PN+ TY+ ++ LC N +VE+A L + M ++ D
Sbjct: 360 FQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+YN + C V A L + PD +Y ++ R ++DK+
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 150/307 (48%), Gaps = 6/307 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAI--LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
G + +V S+ ILV+ G CK I ++ L EM + + N+ F + A+ + +
Sbjct: 419 GCKPNVYSYTILVD--GFCKLGKIDEAYNVLNEM-SADGLKPNTVGFNCLISAFCKEHRI 475
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSIL 225
A+ F M G KP ++ F+ L+ LC+ +K A D + TY+ L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I+ + + G+ +AR+L M+ QG P+D + YN+ + LC+ G VD+A ++F ML
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P + +I I+ C + + A +M P++ T+N +I LC+ ++E+
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+ ++ G+ PDT ++N + + C V A L+ +D P+ T++++L+ +I
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Query: 406 RIGRFDK 412
D+
Sbjct: 716 PQETLDR 722
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 6/268 (2%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
+ ++ + D A F R+ KP I F+ L++ + A+
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMV 380
Query: 213 SHFLLTAK--TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
+ + + TY+ LI G+ K G G A E+ M ++GC ++ +Y +D CK G +
Sbjct: 381 TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
DEA N+ ++M + ++P+ ++ I +C + I A + +M R P+V+T+N +
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
I LC+ D+++ A LL +MI GV +T +YN + E+ A +L++ M
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 391 FPDRHTYNMVLKLLIRIGRFDKATEVWE 418
D TYN ++K L R G DKA ++E
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFE 588
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 5/237 (2%)
Query: 186 HDFDM---LLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSI-LISGWGKIGDSGKAREL 241
H FD+ L+ L K + Q K ++ ++ I ++ + K G G+ L
Sbjct: 109 HSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRL 168
Query: 242 FQAMLD-QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
M + C +YN L+ L G C A N+F+DMLS+++ P FT+ + + +C
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
N+I SA +L M + +PN Y +I L K ++V EA +LL+EM L G PD
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
++N + C ++ A ++++RM PD TY ++ L +IGR D A +++
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 146/325 (44%), Gaps = 13/325 (4%)
Query: 94 GFSAHRFFLWAKSIPGFQHSVESFHILVE-------ILGSCKQ--FAILWDFLTEMRESS 144
GF H AK++ V S+ I+ + I G K+ + + L +MR
Sbjct: 362 GFVTHGRLDDAKAV--LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 145 CCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
C + N + + + + D A M G+KP F+ L+ CK + +A
Sbjct: 420 C-KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 205 QQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA 263
+ F + + T++ LISG ++ + A L + M+ +G + + YN ++A
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 264 LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPN 323
+ G + EA + ++M+ + D TY+ I C A ++ A + +KM R P+
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 324 VFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMS 383
+ N +I LC++ VEEA E EM+LRG PD ++N++ C + L +
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 384 RMEKDNCFPDRHTYNMVLKLLIRIG 408
+++ + PD T+N ++ L + G
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 152/355 (42%), Gaps = 35/355 (9%)
Query: 96 SAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF 155
++ F W S G++HS + + +L+ LG+ +F + L +M++ +F
Sbjct: 93 TSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIV-FKESLFIS 151
Query: 156 IFKAYSRANLPDGAIRSFLRM-DEFGIKPTIHDFDMLLYFLCKRK-HVKQAQQFFDQAKS 213
I + Y +A P R L M + + +PT ++++L L H A F+D
Sbjct: 152 IMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSR 211
Query: 214 HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEA 273
T T+ +++ + + + A L + M GC + + Y + +L K V+EA
Sbjct: 212 KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEA 271
Query: 274 TNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
+ +M PDA T++ I C + I+ A +++++M P+ TY ++
Sbjct: 272 LQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 334 LCKNDKVEEAYEL-------------------------------LDEMILR-GVKPDTWS 361
LCK +V+ A +L L +M+ G+ PD +
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
YN++ + V AL ++ M C P+ ++Y +++ ++G+ D+A V
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 1/238 (0%)
Query: 179 FGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGK 237
+GI P + ++ L+Y K V A + D +Y+IL+ G+ K+G +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A + M G + + +N + A CK + EA IF +M K +PD +T++ I
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
C+ ++I A +L M ++ N TYN +I + +++EA +L++EM+ +G
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
D +YN++ C EV +A L +M +D P + N+++ L R G ++A E
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 7/285 (2%)
Query: 131 AILWDFLTEMR-ESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFD 189
A+L D +T C NS I+ Y + L A+ M G KP ++ +
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIY-----GYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 190 MLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQ 248
+L+ CK + +A ++ + L ++ LIS + K +A E+F+ M +
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 249 GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSA 308
GC D+ +N+ + LC+ + A + DM+S+ V + TY+ I+ + +I A
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 309 FRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAH 368
+++++M + TYN +IK LC+ +V++A L ++M+ G P S N +
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 369 HCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
C V A+ M PD T+N ++ L R GR +
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 153/327 (46%), Gaps = 7/327 (2%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
+ + F A + F+ + ++E + F + L+ +R + I F +
Sbjct: 60 SEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERS-FIVV 118
Query: 157 FKAYSRANLPDGAIRSFLRM-DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD-----Q 210
F+AY +A+LPD A+ F RM DEF K ++ F+ +L + + +F+D
Sbjct: 119 FRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSN 178
Query: 211 AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
+ +++++I K+ +A E+F+ M ++ C D Y +D LCK +
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
DEA + +M S+ P Y++ I C D+ +++D M +PN TYN +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
I LC K+++A LL+ M+ P+ +Y + + A+RL+S ME+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 391 FPDRHTYNMVLKLLIRIGRFDKATEVW 417
++H Y++++ L + G+ ++A +W
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLW 385
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 142/312 (45%), Gaps = 4/312 (1%)
Query: 111 QHSVESFHILVEIL---GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPD 167
+ SV+SF+ ++ ++ G + +D++ + N F + KA + D
Sbjct: 145 KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVD 204
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKT-YSILI 226
AI F M E P + + L+ LCK + + +A D+ +S + Y++LI
Sbjct: 205 RAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLI 264
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
G K GD + +L M +GC + + YN + LC G +D+A ++ M+S +
Sbjct: 265 DGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P+ TY I+ A R+L M N Y+ +I L K K EEA L
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
+M +G KP+ Y+ + C + + A +++RM C P+ +TY+ ++K +
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 407 IGRFDKATEVWE 418
G ++A +VW+
Sbjct: 445 TGLCEEAVQVWK 456
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 4/239 (1%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAKTYSIL 225
D A+ RM P + L+ L K++ A + + + L YS+L
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
ISG K G + +A L++ M ++GC +++ Y+ +D LC+ G +EA I + M++
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P+A+TYS + + A +V +M + N F Y+ +I LC +V+EA
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM---EKDNCFPDRHTYNMVL 401
+ +M+ G+KPDT +Y++I C + AL+L M E+ PD TYN++L
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 4/272 (1%)
Query: 137 LTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLC 196
L E SS C N + + + A+R M+E G H + +L+ L
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 197 KRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLL 255
K ++A + + A+ YS+L+ G + G +A+E+ M+ GC +
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY 433
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
Y++ + K G +EA ++ +M + F YS+ I C + A V KM
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 316 RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR---GVKPDTWSYNAIQAHHCDH 372
+ P+ Y+ IIK LC ++ A +L EM+ + +PD +YN + C
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ 553
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
++SRA+ L++ M C PD T N L L
Sbjct: 554 KDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 110/239 (46%), Gaps = 1/239 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKA 238
G P ++ L++ LC + + +A ++ S + TY LI+G K + A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
L +M ++G ++ Y+ + L K G +EA +++ M K +P+ YS+ +
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
C + A +L++M LPN +TY+ ++K K EEA ++ EM G +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ Y+ + C V A+ + S+M PD Y+ ++K L IG D A +++
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 7/223 (3%)
Query: 204 AQQFFDQAK--SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFL 261
+++ F A F L T S +I + GD +L + + + ++
Sbjct: 60 SEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVF 119
Query: 262 DALCKGGCVDEATNIFHDMLSK-RVEPDAFTYSIFIHTYCDANDIHSAFR----VLDKMR 316
A K D+A ++FH M+ + R + +++ ++ + H V++
Sbjct: 120 RAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNM 179
Query: 317 RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVS 376
N+ PN ++N +IK LCK V+ A E+ M R PD ++Y + C +
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 377 RALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
A+ L+ M+ + C P YN+++ L + G + T++ +N
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDN 282
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 33/212 (15%)
Query: 125 GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPT 184
G C++ +W EM ++ C N + + A+ + +M GIKP
Sbjct: 446 GLCEEAVQVWK---EMDKTGCSR-NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501
Query: 185 IHDFDMLLYFLCKRKHVKQAQQFF------DQAKSHFLLTAKTYSILISGWGKIGDSGKA 238
+ ++ LC + A + + ++ KS + TY+IL+ G D +A
Sbjct: 502 TVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV--TYNILLDGLCMQKDISRA 559
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDAL------CKGG---------------CVDEATNIF 277
+L +MLD+GC D++ N FL+ L C G V A I
Sbjct: 560 VDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIV 619
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAF 309
ML K + P T+++ + C I++A
Sbjct: 620 EVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 142/312 (45%), Gaps = 5/312 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
GF V S+ L+ + ++ + +M E C + + I + + P
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC-KPTLITYNVILNVFGKMGTPWN 261
Query: 169 AIRSFL-RMDEFGIKPTIHDFDMLLYFLCKRK--HVKQAQQFFDQAKSHFLLTAKTYSIL 225
I S + +M GI P + ++ L+ CKR H + AQ F + + F TY+ L
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
+ +GK +A ++ M+ G ++ YN+ + A + G +DEA + + M K
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+PD FTY+ + + A + SA + ++MR PN+ T+N IK K E +
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+ DE+ + G+ PD ++N + A + S + M++ P+R T+N ++
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 406 RIGRFDKATEVW 417
R G F++A V+
Sbjct: 501 RCGSFEQAMTVY 512
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 133/309 (43%), Gaps = 2/309 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + V ++ L+ + EMR + C + N F K Y
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC-KPNICTFNAFIKMYGNRGKFTE 437
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILIS 227
++ F ++ G+ P I ++ LL + + F + K + F+ +T++ LIS
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+ + G +A +++ MLD G DL YN L AL +GG +++ + +M R +P
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ TY +H Y + +I + +++ + P ++ K D + EA
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF 617
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
E+ RG PD + N++ + + V++A ++ M++ P TYN ++ + R
Sbjct: 618 SELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRS 677
Query: 408 GRFDKATEV 416
F K+ E+
Sbjct: 678 ADFGKSEEI 686
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 17/228 (7%)
Query: 161 SRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTA 219
S+ +L A R+F + E G P I + ++ +R+ V +A D K F +
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664
Query: 220 KTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
TY+ L+ + D GK+ E+ + +L +G D+++YN + A C+ + +A+ IF +
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
M + + PD TY+ FI +Y + A V+ M + PN TYN I+ CK ++
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
+EA +++ LR + P H LRL+ R+ K
Sbjct: 785 KDEAKLFVED--LRNLDP--------------HAPKGEDLRLLERIVK 816
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 152/345 (44%), Gaps = 14/345 (4%)
Query: 85 QVLKRCKNLGFS-----AHRFFLWAKSIPGFQHSVES--FHILVEILGSCKQFAILWDFL 137
++L K LGF A R F W +Q +++ I++ +LG + + +
Sbjct: 137 ELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMF 196
Query: 138 TEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFL 195
++E + D++ + + A++ + A+ F +M+E G KPT+ ++++L
Sbjct: 197 NGLQEDG---FSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF 253
Query: 196 CKRKHV-KQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVD 253
K + ++ KS + A TY+ LI+ + +A ++F+ M G D
Sbjct: 254 GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYD 313
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
+ YN LD K EA + ++M+ P TY+ I Y + A + +
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKN 373
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
+M P+VFTY ++ + KVE A + +EM G KP+ ++NA + +
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Query: 374 EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ + +++ + PD T+N +L + + G + + V++
Sbjct: 434 KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 128/309 (41%), Gaps = 2/309 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + +++ L+ + G + + EM+ + + F + AYSR +
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP-ERETFNTLISAYSRCGSFEQ 507
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILIS 227
A+ + RM + G+ P + ++ +L L + +Q+++ + + + TY L+
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+ + G L + + + + K + EA F ++ + P
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D T + + Y + A VLD M+ P++ TYN ++ ++ ++ E+L
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
E++ +G+KPD SYN + +C + + A R+ S M PD TYN +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 408 GRFDKATEV 416
F++A V
Sbjct: 748 SMFEEAIGV 756
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 4/264 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + +++ ++ L + L EM E C+ N + + AY+ G
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGK-EIG 576
Query: 169 AIRSFLRMDEFG-IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAKTYSILI 226
+ S G I+P L+ K + +A++ F + K F T + ++
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
S +G+ KA + M ++G + YN+ + + ++ I ++L+K ++
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
PD +Y+ I+ YC + A R+ +MR ++P+V TYN I + EEA +
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 347 LDEMILRGVKPDTWSYNAIQAHHC 370
+ MI G +P+ +YN+I +C
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYC 780
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 129/309 (41%), Gaps = 8/309 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
GF E+F+ L+ C F M ++ + + + A +R + +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP-DLSTYNTVLAALARGGMWEQ 542
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL----LTAKTYSI 224
+ + M++ KP + LL+ K + ++ S + + KT +
Sbjct: 543 SEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
+ S + ++ +A F + ++G D+ N+ + + V +A + M +
Sbjct: 603 VCSKCDLLPEAERA---FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
P TY+ ++ + + D + +L ++ + P++ +YN +I C+N ++ +A
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+ EM G+ PD +YN + A+ ++ M K C P+++TYN ++
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Query: 405 IRIGRFDKA 413
++ R D+A
Sbjct: 780 CKLNRKDEA 788
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 1/262 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA- 211
F + Y + D R +M++ +P + + L+ LCK + A FD+
Sbjct: 278 FNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC 337
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
K + ++ LI G + G+ +E +Q ML +G D++ YN ++ CK G +
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
A NI M+ + + PD TY+ I +C D+ +A + +M + + + ++ ++
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
+CK +V +A L EM+ G+KPD +Y + C + +L+ M+ D
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Query: 392 PDRHTYNMVLKLLIRIGRFDKA 413
P TYN++L L ++G+ A
Sbjct: 518 PSVVTYNVLLNGLCKLGQMKNA 539
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 1/230 (0%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
N IF + +SR D S+ +M G++P I ++ L+ CK + A+
Sbjct: 344 NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 209 DQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
D L K TY+ LI G+ + GD A E+ + M G +D + ++ + +CK
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
G V +A +ML ++PD TY++ + +C D + F++L +M+ +P+V TY
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
N ++ LCK +++ A LLD M+ GV PD +YN + H H S+
Sbjct: 524 NVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 152/362 (41%), Gaps = 52/362 (14%)
Query: 100 FFLWAKSIPGFQHSVESFHILVEILGSCKQF-------------------AILWDFLTEM 140
FF + S PGF+ +VE++ +L L + F + ++ L EM
Sbjct: 104 FFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEM 163
Query: 141 RESSCCEINSDIFWFIFK------------AYSR-----------ANL--------PDGA 169
R + C D + SR NL P G
Sbjct: 164 RVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGT 223
Query: 170 IRSF-LRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILIS 227
I F + + + G ++ F++L+ CK ++ AQ+ FD+ K T +++ LI+
Sbjct: 224 IWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN 283
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ K+G+ + L M D+ Y+ ++ALCK +D A +F +M + + P
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP 343
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ ++ IH + +I KM L P++ YN ++ CKN + A ++
Sbjct: 344 NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
D MI RG++PD +Y + C +V AL + M+++ DR ++ ++ + +
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 408 GR 409
GR
Sbjct: 464 GR 465
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 128/297 (43%), Gaps = 8/297 (2%)
Query: 110 FQHSVESFHILVEILGSCKQFAILWDF-LTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
Q +V SF+ L+ G CK + F L E S D+F + + A + N
Sbjct: 271 LQPTVVSFNTLIN--GYCKVGNLDEGFRLKHQMEKS--RTRPDVFTYSALINALCKENKM 326
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKT-YSIL 225
DGA F M + G+ P F L++ + + ++ + + S L Y+ L
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
++G+ K GD AR + M+ +G D + Y +D C+GG V+ A I +M +
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
E D +S + C + A R L +M R + P+ TY ++ CK + ++
Sbjct: 447 ELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
LL EM G P +YN + C ++ A L+ M PD TYN +L+
Sbjct: 507 LLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 150/316 (47%), Gaps = 10/316 (3%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRE----SSCCEINSDIFWFIFKAYSRAN 164
G H + SF IL+ C + ++ L +M + S + S + + + N
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS-----LLNGFCQGN 163
Query: 165 LPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA-QQFFDQAKSHFLLTAKTYS 223
A+ MD FG P + ++ ++ LCK + + A + F+ K A TY+
Sbjct: 164 RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
Query: 224 ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
LISG G A L + M+ + +++ + +D K G + EA N++ +M+ +
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
V P+ FTY+ I+ +C + A + D M P+V TYN +I CK+ +VE+
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
+L EM +G+ D ++YN + +C +++ A ++ +RM PD TYN++L
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 404 LIRIGRFDKATEVWEN 419
L G+ +KA + E+
Sbjct: 404 LCNNGKIEKALVMVED 419
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 1/241 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILIS 227
A R M + I P + F L+ K ++ +A+ + + + + TY+ LI+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ G G A+ +F M+ +GC D++ YN + CK V++ +F +M + +
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
DAFTY+ IH YC A ++ A +V ++M C + P++ TYN ++ LC N K+E+A ++
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
+++ + D +YN I C ++ A L + + PD Y ++ L R
Sbjct: 418 EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 408 G 408
G
Sbjct: 478 G 478
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 1/191 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKA 238
G P + ++ L+ CK K V+ + F + L+ A TY+ LI G+ + G A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+++F M+D G D++ YN LD LC G +++A + D+ ++ D TY+I I
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
C + + A+ + + R + P+ Y +I LC+ EA +L M G P
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Query: 359 TWSYNAIQAHH 369
Y+ H
Sbjct: 499 ERIYDETLRDH 509
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A LF ML ++ + L + K D ++H M + + D ++++I IH
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + + A +L KM + P++ T ++ C+ ++ +EA L+D M G P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ YN + C + +++ AL + MEK D TYN ++ L GR+ A +
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 418 EN 419
+
Sbjct: 243 RD 244
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 179/412 (43%), Gaps = 8/412 (1%)
Query: 9 LFSRYK--NLTSVVCPLFQHKQNCHHFHSLPTPQVFN--PLLPDLVSEISRVVSDHRHPH 64
L RY +L S++ + HF+SL Q + P D + I+ VV+ R
Sbjct: 3 LLRRYSGGSLYSILPIRASIESTIRHFNSLEPLQSSDSTPTKGDYFAAINHVVNIVRREI 62
Query: 65 HDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEIL 124
H E SLN ++S+ V +VL+ + RFF WA+S P + + + L + L
Sbjct: 63 HP-ERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSL 121
Query: 125 GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE-FGIKP 183
S K++ +W L +M++ S +I+ + FI + Y + D A+ F + + G +
Sbjct: 122 ASHKKYESMWKILKQMKDLSL-DISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQ 180
Query: 184 TIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELF 242
T+ ++ LL+ LC K A + L K TY+IL++GW G +A+E
Sbjct: 181 TVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFL 240
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA 302
M +G + ++ L G ++ A + M PD T++I I +
Sbjct: 241 DEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKS 300
Query: 303 NDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY 362
++ + + L ++ TY +I + K K++EA+ LL+ + G KP Y
Sbjct: 301 GEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLY 360
Query: 363 NAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
I C + A S M+ P+R Y M++ + R G+F A
Sbjct: 361 APIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAA 412
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 2/239 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKAREL 241
PT +++ L L K + + Q K L ++ +T +I +GK G +A EL
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 242 FQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
F + GC + YN+ L ALC A + M+ K ++PD TY+I ++ +C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
A + A LD+M R P + +I+ L +E A E++ +M G PD
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
++N + EV + + K D TY ++ + +IG+ D+A + N
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNN 347
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 148/309 (47%), Gaps = 8/309 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G + +V +++ L+ L + +++ L++M E +IN ++ F + A+ +
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER---KINPNVVTFSALIDAFVKEGKL 341
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSIL 225
A + + M + I P I + L+ C + +A+ F+ S TY+ L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G+ K + ELF+ M +G + + YN + L + G D A IF M+S V
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
PD TYSI + C + A V + +++ + P+++TYN +I+ +CK KVE+ ++
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
L + L+GVKP+ Y + + C A L M++D P+ TYN +++ +
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 406 RIGRFDKAT 414
R G DKA
Sbjct: 582 RDG--DKAA 588
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 2/232 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKAREL 241
P + ++ L+ CK K V++ + F + L+ TY+ LI G + GD A+++
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F+ M+ G P D++ Y+ LD LCK G +++A +F + ++EPD +TY+I I C
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
A + + + + + PNV Y +I C+ EEA L EM G P++ +
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
YN + + + + L+ M D T +MV+ +L GR +K+
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 129/258 (50%), Gaps = 11/258 (4%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSIL 225
D A+ +M++ I+ + + ++ LC K+V A F + + + TY+ L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G A L M+++ +++ ++ +DA K G + EA ++ +M+ + +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+PD FTYS I+ +C + + A + + M + PNV TYN +IK CK +VEE E
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 346 LLDEMILRGVKPDTWSYNAI-----QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
L EM RG+ +T +YN + QA CD + ++ +M D PD TY+++
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ-----KIFKKMVSDGVPPDIITYSIL 471
Query: 401 LKLLIRIGRFDKATEVWE 418
L L + G+ +KA V+E
Sbjct: 472 LDGLCKYGKLEKALVVFE 489
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 140/295 (47%), Gaps = 2/295 (0%)
Query: 125 GSCKQFAI-LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKP 183
G CK+ I L L + E E + I+ I A + A+ F MD GI+P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 184 TIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGKARELF 242
+ ++ L+ LC A + D + T+S LI + K G +A +L+
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA 302
M+ + D+ Y++ ++ C +DEA ++F M+SK P+ TY+ I +C A
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 303 NDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY 362
+ + +M + L+ N TYN +I+ L + + A ++ +M+ GV PD +Y
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 363 NAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ + C + ++ +AL + ++K PD +TYN++++ + + G+ + +++
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 162 RANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAK 220
R+ LP A+ +M + G +P I LL C K + +A DQ +
Sbjct: 128 RSQLPL-ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
T++ LI G + +A L M+ +GC DL Y ++ LCK G +D A ++ M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC----- 335
++E D Y+ I C+ +++ A + +M + PNV TYN +I+ LC
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 336 ------------------------------KNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
K K+ EA +L DEMI R + PD ++Y+++
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 366 QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
C H + A + M +CFP+ TYN ++K + R ++ E++
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIG 233
RM G +P + + ++ LCKR + A + K Y+ +I
Sbjct: 210 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK 269
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
+ A LF M ++G +++ YN+ + LC G +A+ + DM+ +++ P+ T+S
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I + + A ++ D+M + ++ P++FTY+ +I C +D+++EA + + MI +
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
P+ +YN + C V + L M + + TYN +++ L + G D A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 414 TEVWE 418
++++
Sbjct: 450 QKIFK 454
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
F + +S L + ++ L+S K+ L + M + DL +YN ++ C+
Sbjct: 68 FGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCR 127
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
+ A + M+ EPD T S ++ YC I A ++D+M PN T
Sbjct: 128 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVT 187
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+N +I L ++K EA L+D M+ RG +PD ++Y + C ++ AL L+ +ME
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 387 KDNCFPDRHTYNMVLKLL 404
K D Y ++ L
Sbjct: 248 KGKIEADVVIYTTIIDAL 265
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A +LF M+ ++ +N L A+ K D ++ M + R+ D ++Y+I I+
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + + A VL KM + P++ T + ++ C ++ EA L+D+M + +P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+T ++N + H + S A+ L+ RM C PD TY V+ L + G D A
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 122/242 (50%), Gaps = 4/242 (1%)
Query: 181 IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGK-- 237
I+P + F++++ LCK + +A+ + K + +Y+ LI G+ K+G +GK
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 238 -ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
A + + M++ +L +N +D K + + +F +ML + V+P+ +Y+ I
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
+ C+ I A + DKM + PN+ TYN +I CKND ++EA ++ + +G
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
P T YN + +C ++ L ME++ PD TYN ++ L R G + A ++
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 417 WE 418
++
Sbjct: 459 FD 460
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 42/311 (13%)
Query: 147 EINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCK----RKH 200
+I ++F F + A + + A M +G P + ++ L+ CK K
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 201 VKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNF 260
K + ++ T++ILI G+ K + + ++F+ MLDQ ++++YN+
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 261 LDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS--------------------------- 293
++ LC GG + EA ++ M+S V+P+ TY+
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 294 --------IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+ I YC I F + ++M R ++P+V TYNC+I LC+N +E A +
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
L D++ +G+ PD +++ + +C E +A L+ M K P TYN+V+K
Sbjct: 458 LFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 406 RIGRFDKATEV 416
+ G AT +
Sbjct: 517 KEGNLKAATNM 527
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 3/236 (1%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIG 233
+M G++P + ++ L+ CK +K+A F K + T + Y++LI + K+G
Sbjct: 356 KMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
L + M +G D+ YN + LC+ G ++ A +F + SK + PD T+
Sbjct: 416 KIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFH 474
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM-IL 352
I + YC + A +L +M + L P TYN ++K CK ++ A + +M
Sbjct: 475 ILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE 534
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
R ++ + SYN + + ++ A L++ M + P+R TY +V + ++ G
Sbjct: 535 RRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 38/222 (17%)
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
S +++ M+ + ++ +N ++ALCK G +++A ++ DM P+ +Y+
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 295 FIHTYC-----------DA-------NDIH--------------------SAFRVLDKMR 316
I YC DA ND+ + +V +M
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 317 RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVS 376
++ PNV +YN +I LC K+ EA + D+M+ GV+P+ +YNA+ C + +
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 377 RALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
AL + ++ P YNM++ ++G+ D + E
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKE 425
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 152 IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA 211
++ + AY + D M+ GI P + ++ L+ LC+ +++ A++ FDQ
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
S L T+ IL+ G+ + G+S KA L + M G L YN + CK G +
Sbjct: 463 TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Query: 272 EATNIFHDM-LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
ATN+ M +R+ + +Y++ + Y + A +L++M L+PN TY I
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE-I 581
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPD 358
+K +EM+ +G PD
Sbjct: 582 VK---------------EEMVDQGFVPD 594
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 151/349 (43%), Gaps = 37/349 (10%)
Query: 106 SIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANL 165
S+ G + +++ ++ + F+ + L M++ N + + + +
Sbjct: 251 SVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVV-YNKVTYTLLMELSVKNGK 309
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSI 224
A + F M E GI+ +H + L+ + C++ ++K+A FD+ L ++ TY
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGA 369
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI G K+G+ G A L M +G + + +N +D C+ G VDEA+ I+ M K
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 285 VEPDAFT-----------------------------------YSIFIHTYCDANDIHSAF 309
+ D FT Y+ I YC ++ A
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAK 489
Query: 310 RVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHH 369
R+ +M + PN TYN +I CK K++EA +L M G+ PD+++Y ++
Sbjct: 490 RLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGE 549
Query: 370 CDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
C V A+RL S M + TY +++ L + G+ D+A +++
Sbjct: 550 CIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYD 598
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 150/347 (43%), Gaps = 45/347 (12%)
Query: 95 FSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFW 154
FS L G ++ ++ +L+E+ + + EMRE I SD+
Sbjct: 275 FSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG---IESDVH- 330
Query: 155 FIFKAYSRANLPDGAI-RSFLRMDEF---GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ 210
++ + N G + R+FL DE G+ P+ + + L+ +CK + A+ ++
Sbjct: 331 -VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 211 AKSHFL-LTAKTYSILISGWGKIGDSGKA--------RELFQA----------------- 244
+S + +T ++ LI G+ + G +A ++ FQA
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 245 ----------MLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
M++ G + ++Y N +D CK G V+EA +F +M SK V+P+A TY++
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I+ YC I A ++ M + P+ +TY +I C D V+EA L EM L+G
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
+ ++ +Y + + + A L M++ D Y ++
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKS 213
F+ A R + D + F RM + G+K T++ +++ LC+R V+++++ + +
Sbjct: 195 FLVAAKKRRRI-DLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVK 253
Query: 214 HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEA 273
A TY+ +I+ + K D + + M G + + Y ++ K G + +A
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 274 TNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
+F +M + +E D Y+ I C ++ AF + D++ L P+ +TY +I
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 334 LCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
+CK ++ A L++EM +GV +N + +C V A + ME+ D
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 394 RHTYNMVLKLLIRIGRFDKATE 415
T N + R+ R+D+A +
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQ 455
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 135/331 (40%), Gaps = 41/331 (12%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G + +V S I+VE G C++ + ++E S I + + + I AY +
Sbjct: 219 GVKITVYSLTIVVE--GLCRRGEV-EKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDF 275
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSIL 225
G M + G+ + +L+ K + A++ FD+ + + + Y+ L
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
IS + G+ +A LF + ++G Y +D +CK G + A + ++M SK V
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI------IKR------ 333
++ I YC + A + D M + +VFT N I +KR
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQ 455
Query: 334 -----------------------LCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
CK VEEA L EM +GV+P+ +YN + +C
Sbjct: 456 WLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYC 515
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
++ A +L + ME + PD +TY ++
Sbjct: 516 KQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
E+F+ M+D G + + + ++ LC+ G V+++ + + K ++P+A+TY+ I+ Y
Sbjct: 210 EIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAY 269
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK--- 356
D VL M++ ++ N TY +++ KN K+ +A +L DEM RG++
Sbjct: 270 VKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDV 329
Query: 357 --------------------------------PDTWSYNAIQAHHCDHCEVSRALRLMSR 384
P +++Y A+ C E+ A LM+
Sbjct: 330 HVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNE 389
Query: 385 MEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
M+ + +N ++ R G D+A+ +++
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 202/476 (42%), Gaps = 97/476 (20%)
Query: 35 SLPTPQVFNP-------------LLPD-LVSEISRVVSDHRHPHHDLELSLNQFSAQISS 80
SLP P+ P LLP VS+I ++ +L+ +F ++S
Sbjct: 57 SLPPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSP 116
Query: 81 DLVEQVLK--RCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLT 138
+ V VLK + A FF W++ + H++E + LV++L K + +
Sbjct: 117 NFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSS 176
Query: 139 EMRE----SSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYF 194
E+++ + N+ + K++ + + + + + +M E GI+PT++ ++ L+
Sbjct: 177 EIKKFEFPMTVSAANA-----LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 195 LCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARE------------- 240
L V A++ F+ +S + TY+ +I G+ K G + KA E
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291
Query: 241 ----------------------LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
L+Q M ++G V A++ + LCK G ++E +F
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFE 351
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
+M+ K +P+ Y++ I Y + + A R+L +M P+V TY+ ++ LCKN
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 411
Query: 339 KVEEAYE-----------------------------------LLDEMILRGVKPDTWSYN 363
+VEEA + L +EM +G D++ YN
Sbjct: 412 RVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Query: 364 AIQAHHCDHCEVSRALRLMSRM-EKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
A+ H +V A+ L RM E++ C +TY ++L + + R ++A ++W+
Sbjct: 472 ALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWD 527
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 42/280 (15%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGK 231
+ MDE GI+ H F +++ LCK + + F+ + Y++LI G+ K
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 232 IGDSGKARELFQAMLDQG------------------------------CPVDLLA----- 256
G A L M+D+G C D LA
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 257 YNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSA---FRVLD 313
Y++ +D L K G VDEA +F +M K D++ Y+ I + + A F+ ++
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
+ C+ V+TY ++ + K + EEA +L D MI +G+ P + A+ C
Sbjct: 495 EEEGCD--QTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSG 552
Query: 374 EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+V+RA +++ + D +M+ L + GR +A
Sbjct: 553 KVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKEA 591
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
P+ + A N + + K G V+E ++ M +EP +TY+ ++ A + SA R
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY-NAIQAHH 369
V + M + P++ TYN +IK CK + ++A E L +M RG + D +Y IQA +
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 370 CDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
D + + L M++ H +++V+ L + G+ ++ V+EN
Sbjct: 304 ADS-DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFEN 352
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 146/324 (45%), Gaps = 22/324 (6%)
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRE----SSCCEINSDIFWFIFKAYSR 162
I G H++ +++I++ L Q + L +M + S +NS + +
Sbjct: 93 ILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNS-----LLNGFCH 147
Query: 163 ANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-- 220
N A+ +M E G +P F L++ L + +A ++ + K
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER------MVVKGC 201
Query: 221 -----TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
TY +I+G K G+ A L M D++ Y+ +D+LCK VD+A N
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
+F +M +K + PD FTYS I C+ A R+L M + PNV T+N +I
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 336 KNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRH 395
K K+ EA +L DEMI R + P+ +YN++ C H + A ++ + M +C PD
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 396 TYNMVLKLLIRIGRFDKATEVWEN 419
TYN ++ + + E++ +
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRD 405
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 11/288 (3%)
Query: 137 LTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLC 196
L E C+ + + + + PD A+ +M++ I+ + + ++ LC
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 197 KRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLL 255
K +HV A F + + + TYS LIS G A L ML++ +++
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
+N+ +DA K G + EA +F +M+ + ++P+ TY+ I+ +C + + A ++ M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 316 RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI-----QAHHC 370
+ LP+V TYN +I CK KV + EL +M RG+ +T +Y + QA C
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
D+ ++ + +M D P+ TYN +L L + G+ +KA V+E
Sbjct: 432 DNAQM-----VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 2/232 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGKAREL 241
P + ++ L+ CK K V + F D ++ + TY+ LI G+ + D A+ +
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F+ M+ G +++ YN LD LCK G +++A +F + ++EPD +TY+I C
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
A + + + + + P+V YN +I CK EEAY L +M G PD+ +
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
YN + H + + + L+ M D TY +V +L GR DK
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDKG 608
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 144/314 (45%), Gaps = 6/314 (1%)
Query: 107 IPGFQHSVESFHILVEILGSCKQFA--ILWDFLTEMRESSCCEINSDIFWFIFKAYSRAN 164
+ G Q + ++ ++ G CK+ + + L +M E E + I+ + + +
Sbjct: 198 VKGCQPDLVTYGAVIN--GLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKYR 254
Query: 165 LPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYS 223
D A+ F MD GI+P + + L+ LC A + D + T++
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 224 ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
LI + K G +A +LF M+ + +++ YN+ ++ C +DEA IF M+SK
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
PD TY+ I+ +C A + + M R L+ N TY +I + + A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
+ +M+ GV P+ +YN + C + ++ +A+ + ++K PD +TYN++ +
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 404 LIRIGRFDKATEVW 417
+ + G+ + +++
Sbjct: 495 MCKAGKVEDGWDLF 508
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 128/282 (45%), Gaps = 38/282 (13%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILIS 227
A R M E I P + F+ L+ K + +A++ FD+ + TY+ LI+
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ +A+++F M+ + C D++ YN ++ CK V + +F DM + +
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA---- 343
+ TY+ IH + A+D +A V +M + PN+ TYN ++ LCKN K+E+A
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 344 --------------YELLDE-----------------MILRGVKPDTWSYNAIQAHHCDH 372
Y ++ E + L+GVKPD +YN + + C
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
A L +M++D PD TYN +++ +R G DKA
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG--DKAA 573
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIG 233
+M+ G+ ++ +++++ LC+R + A + K + + T + L++G+
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
+A L M++ G D + + + L + EA + M+ K +PD TY
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I+ C + A +L+KM + + +V Y+ +I LCK V++A L EM +
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
G++PD ++Y+++ + C++ S A RL+S M + P+ T+N ++ + G+ +A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 414 TEVWE 418
++++
Sbjct: 330 EKLFD 334
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%)
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
+A +LF M+ ++ ++ L A+ K D + M V + +TY+I I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
+ C + + A +L KM + P++ T N ++ C +++ EA L+D+M+ G +
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
PDT ++ + H + S A+ L+ RM C PD TY V+ L + G D A
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 128/248 (51%), Gaps = 7/248 (2%)
Query: 171 RSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF----DQAKSHFLLTAKTYSILI 226
R +M G+ +++ ++ ++ LCK + ++ A F D+ S L+T T+ +
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTF---L 467
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
SG+ GD K + + +L G D++ ++ ++ LC+ + +A + F +ML +E
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P+ TY+I I + C D + ++ KM+ L P+++ YN I+ CK KV++A EL
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
L M+ G+KPD ++Y+ + + S A + S +E+ C PD +T +V +L +R
Sbjct: 588 LKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLR 647
Query: 407 IGRFDKAT 414
+ T
Sbjct: 648 KSGLSRET 655
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKA 238
G+KP + + +L+ L + + ++ Q LL++ +Y+ +I K A
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
M D+G +L+ +N FL G V + + +L +PD T+S+ I+
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
C A +I AF +M + PN TYN +I+ C + + +L +M G+ PD
Sbjct: 505 LCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPD 564
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
++YNA C +V +A L+ M + PD TY+ ++K L GR +A E++
Sbjct: 565 LYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFS 624
Query: 419 N 419
+
Sbjct: 625 S 625
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%)
Query: 213 SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
S + ++ + +LI WG++G + ++F + G YN +DAL K +D
Sbjct: 139 SGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDL 198
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
A F M S +PD FTY+I IH C + A R++ +M + PNVFTY +I
Sbjct: 199 AYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILID 258
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPD 358
+V+EA + L+ M +R + P+
Sbjct: 259 GFLIAGRVDEALKQLEMMRVRKLNPN 284
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 157/367 (42%), Gaps = 38/367 (10%)
Query: 77 QISSDLVEQVLKRCKNLGFSAHRFFLWAK-SIPGFQHSVESFHILVEILGSCKQFAILWD 135
+IS +L+ ++ LG + + ++A+ S G + S ++ +++ L + +
Sbjct: 142 RISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYL 201
Query: 136 FLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLL--Y 193
+MR S C+ + + + + + D AIR +M++ G +P + + +L+ +
Sbjct: 202 KFQQMR-SDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGF 260
Query: 194 FLCKR--KHVKQAQQF--------------FDQAKSHFLLTAKTYSILI------SGWGK 231
+ R + +KQ + F L K + +L+ S +
Sbjct: 261 LIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQR 320
Query: 232 IG---------DSGKARELFQ---AMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
+G ++ A+E Q + ++G D +N + L KG + E IF
Sbjct: 321 VGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDG 380
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
+S+ V+P Y + + +A R L +M LL +V++YN +I LCK +
Sbjct: 381 FVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARR 440
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
+E A L EM RG+ P+ ++N + + +V + ++ ++ PD T+++
Sbjct: 441 IENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSL 500
Query: 400 VLKLLIR 406
++ L R
Sbjct: 501 IINCLCR 507
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 1/231 (0%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAML 246
+D +LY L K+ QF + + ++ + T++ +S K D + +F +
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFV 382
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
+G Y + AL E M + ++Y+ I C A I
Sbjct: 383 SRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIE 442
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
+A L +M+ + PN+ T+N + V++ + +L+++++ G KPD +++ I
Sbjct: 443 NAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLII 502
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
C E+ A M + P+ TYN++++ G D++ +++
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLF 553
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
+ YC ND+ + L + P+ YN +I L K++ ++ AY +M G
Sbjct: 160 LAKYC--NDVFAQISFL------GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGC 211
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
KPD ++YN + C V A+RL+ +ME++ P+ TY +++ + GR D+A +
Sbjct: 212 KPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALK 271
Query: 416 VWE 418
E
Sbjct: 272 QLE 274
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%)
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
EL + + D G + + + + G ++F + ++P Y+ I
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
+N + A+ +MR P+ FTYN +I +CK V+EA L+ +M G +P+
Sbjct: 191 VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNV 250
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
++Y + V AL+ + M P+ T
Sbjct: 251 FTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEAT 287
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 8/335 (2%)
Query: 82 LVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMR 141
L+ +L K + +A FF G S +S +L++ L KQF + + +
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNE--GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL 171
Query: 142 ESSCCEINSDIFWFIFKAYSRANLPD--GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRK 199
ES + F + + L D + F RM I P++ +++L+ LCK K
Sbjct: 172 ES---DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGK 228
Query: 200 HVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYN 258
+ A+Q FD+ + LL + TY+ LI G+ K G+ K+ ++ + M L+ +N
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 259 NFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
L L K G V++A N+ +M PDAFT+SI Y +A V +
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
+ N +T + ++ LCK K+E+A E+L + +G+ P+ YN + +C ++ A
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 379 LRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+ MEK PD YN +++ +G + A
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 176/381 (46%), Gaps = 33/381 (8%)
Query: 55 RVVSDHRHPHHDLELSLNQ-----FSAQISSDLVEQVLKRCKNLGFSAHRFFLW------ 103
R+ +DH P ++ N F A + D E VLK K+LGF F
Sbjct: 274 RMKADHIEPSL---ITFNTLLKGLFKAGMVED-AENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 104 -----AKSIPG-FQHSVESF--------HILVEILGSCKQFAILWDFLTEMRESSCCEI- 148
A++ G ++ +V+S IL+ L CK+ I RE + +
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL--CKEGKIEKAEEILGREMAKGLVP 387
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
N I+ + Y R GA M++ G+KP ++ L+ C+ ++ A++
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 209 DQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
++ K + + +TY+ILI G+G+ + K ++ + M D G ++++Y ++ LCKG
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
+ EA + DM + V P Y++ I C I AFR +M + + N+ TY
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
N +I L K+ EA +LL E+ +G+KPD ++YN++ + + V R + L M++
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 388 DNCFPDRHTYNMVLKLLIRIG 408
P TY++++ L + G
Sbjct: 628 SGIKPTLKTYHLLISLCTKEG 648
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 127/259 (49%), Gaps = 1/259 (0%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-H 214
+ Y +A P+ + + RM I+P++ F+ LL L K V+ A+ + K
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
F+ A T+SIL G+ + A +++ +D G ++ + L+ALCK G +++A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
I ++K + P+ Y+ I YC D+ A ++ M + + P+ YNC+I+R
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
C+ ++E A + +++M L+GV P +YN + + E + ++ ME + P+
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 395 HTYNMVLKLLIRIGRFDKA 413
+Y ++ L + + +A
Sbjct: 495 VSYGTLINCLCKGSKLLEA 513
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 1/265 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
F +F YS + A+ + + G+K + +LL LCK +++A++ +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 213 SHFLLTAKT-YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
+ L+ + Y+ +I G+ + GD AR +AM QG D LAYN + C+ G ++
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
A + M K V P TY+I I Y + F +L +M +PNV +Y +I
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
LCK K+ EA + +M RGV P YN + C ++ A R M K
Sbjct: 502 NCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEV 416
+ TYN ++ L G+ +A ++
Sbjct: 562 LNLVTYNTLIDGLSMTGKLSEAEDL 586
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVK-QAQQFFDQAKSHFLLTAKTYSILISGWGK 231
F + GI P+ +LL L K K + F + +S F + Y I K
Sbjct: 132 FFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVK 191
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
+ D GK ELF M + YN +D LCKG +++A +F +ML++R+ P T
Sbjct: 192 LSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLIT 251
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
Y+ I YC A + +F+V ++M+ ++ P++ T+N ++K L K VE+A +L EM
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
G PD ++++ + + + + AL + + +T +++L L + G+ +
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 412 KATEV 416
KA E+
Sbjct: 372 KAEEI 376
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 132/305 (43%), Gaps = 41/305 (13%)
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
+ G SVE+++IL+ G +F +D L EM ++
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN----------------------- 488
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF-FDQAKSHFLLTAKTYSIL 225
G P + + L+ LCK + +AQ D + Y++L
Sbjct: 489 -------------GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G G A + ML +G ++L+ YN +D L G + EA ++ ++ K +
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+PD FTY+ I Y A ++ + ++M+R + P + TY+ +I LC + +E
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTER 654
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
L EM L KPD YN + + H ++ +A L +M + + D+ TYN ++ +
Sbjct: 655 LFGEMSL---KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711
Query: 406 RIGRF 410
++G+
Sbjct: 712 KVGKL 716
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 118/246 (47%), Gaps = 12/246 (4%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G + ++ +++ L++ L + + D L E+ + D+F + + Y A
Sbjct: 559 GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG---LKPDVFTYNSLISGYGFAGNV 615
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA--KSHFLLTAKTYSI 224
I + M GIKPT+ + +L+ LC ++ ++ ++ F + K L+ Y+
Sbjct: 616 QRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLLV----YNG 670
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
++ + GD KA L + M+++ +D YN+ + K G + E ++ +M ++
Sbjct: 671 VLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNARE 730
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+EP+A TY+I + +C+ D SA+ +M+ L +V N ++ L + + +EA
Sbjct: 731 MEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAE 790
Query: 345 ELLDEM 350
++ EM
Sbjct: 791 IVISEM 796
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 160/355 (45%), Gaps = 38/355 (10%)
Query: 100 FFLWAK-SIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFK 158
+LW + + G H++ + +IL+ C Q ++ FL +M + E + F +
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLN 159
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLL 217
+ R + A+ F +M G KP + ++ ++ LCK K V A ++ K
Sbjct: 160 GFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGP 219
Query: 218 TAKTYSILISG------WG-----------------------------KIGDSGKARELF 242
TY+ LISG W K G +A E +
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA 302
+ M+ + D++ Y+ + LC +DEA +F M+SK PD TYSI I+ YC +
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 303 NDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY 362
+ ++ +M + ++ N TY +I+ C+ K+ A E+ M+ GV P+ +Y
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 363 NAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
N + CD+ ++ +AL +++ M+K+ D TYN++++ + + G A +++
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 6/303 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G++ +V ++ +++ L KQ D L M + I D+ + + +
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG---IGPDVVTYNSLISGLCSSGRW 237
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSIL 225
A R M + I P + F+ L+ K V +A++F+++ L TYS+L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G +A E+F M+ +GC D++ Y+ ++ CK V+ +F +M + V
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+ TY+I I YC A ++ A + +M C + PN+ TYN ++ LC N K+E+A
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+L +M G+ D +YN I C EV+ A + + PD TY ++ L
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLY 477
Query: 406 RIG 408
+ G
Sbjct: 478 KKG 480
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA- 211
F + A S+ D I + +M GI + ++LL C+ + A F +
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
K + T+ L++G+ + A +F M+ G +++ YN +D LCK VD
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
A ++ + M + PD TY+ I C + A R++ M + + P+VFT+N +I
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
K +V EA E +EMI R + PD +Y+ + C + + A + M CF
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323
Query: 392 PDRHTYNMVL 401
PD TY++++
Sbjct: 324 PDVVTYSILI 333
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
FF + L + +S L+S K+ L++ M G P +L N L+ C+
Sbjct: 69 FFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCR 128
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
+ A + M+ EP T+ ++ +C + ++ A + D+M PNV
Sbjct: 129 CSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVI 188
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
YN II LCK+ +V+ A +LL+ M G+ PD +YN++ + C S A R++S M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
K +PD T+N ++ ++ GR +A E +E
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLT 218
YSR D A F M G P + + +L+ CK K V+ + F + ++ +
Sbjct: 304 YSRL---DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
TY+ILI G+ + G A E+F+ M+ G +++ YN L LC G +++A I
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
DM ++ D TY+I I C A ++ A+ + + L+P+++TY ++ L K
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 339 KVEEAYELLDEMILRGVKPD 358
EA L +M G+ P+
Sbjct: 481 LRREADALFRKMKEDGILPN 500
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 154/332 (46%), Gaps = 25/332 (7%)
Query: 96 SAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESS----------- 144
+A F W P ++HSV S+ L+ +L + +++ M +S
Sbjct: 105 TALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLD 164
Query: 145 -CCEINSD------------IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDML 191
C ++N D + + + +R L D + ++ M E + P I+ ++ +
Sbjct: 165 LCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKM 224
Query: 192 LYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGC 250
+ CK +V++A Q+ + ++ TY+ LI G+ + D A ++F M +GC
Sbjct: 225 VNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC 284
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
+ +AY + + LC +DEA ++F M P TY++ I + C + A
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
++ +M + PN+ TY +I LC K E+A ELL +M+ +G+ P+ +YNA+ +C
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
+ A+ ++ ME P+ TYN ++K
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 158/340 (46%), Gaps = 10/340 (2%)
Query: 82 LVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFL--TE 139
L++ + +CK F R L G +V +++ L+ G CK+ ++ D + E
Sbjct: 364 LIDSLCSQCK---FEKARELLGQMLEKGLMPNVITYNALIN--GYCKR-GMIEDAVDVVE 417
Query: 140 MRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRK 199
+ ES N+ + + K Y ++N+ A+ +M E + P + ++ L+ C+
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 200 HVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYN 258
+ A + L+ + TY+ +I K +A +LF ++ +G +++ Y
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 259 NFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
+D CK G VDEA + MLSK P++ T++ IH C + A + +KM +
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
L P V T +I RL K+ + AY +M+ G KPD +Y +C + A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 379 LRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+M++M ++ PD TY+ ++K +G+ + A +V +
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 4/275 (1%)
Query: 148 INSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
++ D F + + Y + D A + F M G + + L++ LC + + +A
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 206 QFFDQAKS-HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
F + K T +TY++LI +A L + M + G ++ Y +D+L
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
C ++A + ML K + P+ TY+ I+ YC I A V++ M L PN
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
TYN +IK CK++ V +A +L++M+ R V PD +YN++ C A RL+S
Sbjct: 429 RTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 385 MEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
M PD+ TY ++ L + R ++A +++++
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 84/157 (53%)
Query: 257 YNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR 316
YN L++L + G VDE ++ +ML +V P+ +TY+ ++ YC ++ A + + K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 317 RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVS 376
L P+ FTY +I C+ ++ A+++ +EM L+G + + +Y + C +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 377 RALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
A+ L +M+ D CFP TY +++K L R +A
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 20/215 (9%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSIL 225
D A F +M G KP H + + C+ + A+ + + + + TYS L
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC-------KGG----CV---- 270
I G+G +G + A ++ + M D GC + + + L KG C
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 271 ---DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC-NLLPNVFT 326
D + M+ V P+A +Y I C+ ++ A +V D M+R + P+
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
+N ++ CK K EA +++D+MI G P S
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLES 833
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 111/281 (39%), Gaps = 24/281 (8%)
Query: 127 CKQFAIL--WDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIK 182
C++ +L D + +MRE+ ++ D+F + + K Y + A RM + G +
Sbjct: 648 CREGRLLDAEDMMAKMRENG---VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELF 242
P+ H F L+ L + K+ KQ K + + + EL
Sbjct: 705 PSQHTFLSLIKHLLEMKYGKQ----------------KGSEPELCAMSNMMEFDTVVELL 748
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF-HDMLSKRVEPDAFTYSIFIHTYCD 301
+ M++ + +Y + +C+ G + A +F H ++ + P ++ + C
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
+ A +V+D M LP + + +I L K + E + ++ G D +
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELA 868
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
+ I V L + MEK+ C TY+++++
Sbjct: 869 WKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 142/314 (45%), Gaps = 10/314 (3%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMR----ESSCCEINSDIFWFIFKAYSRAN 164
G H++ +++IL+ Q ++ L +M E S ++S + Y
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS-----LLNGYCHGK 169
Query: 165 LPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYS 223
A+ +M E G +P F L++ L +A D+ + TY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 224 ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
++++G K GD A L M +++ Y+ +D+LCK D+A N+F +M +K
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
V P+ TYS I C+ A R+L M + PNV T+N +I K K+ EA
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
+L DEMI R + PD ++Y+++ C H + A + M +CFP+ TYN ++
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 404 LIRIGRFDKATEVW 417
+ R D+ E++
Sbjct: 410 FCKAKRIDEGVELF 423
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 132/279 (47%), Gaps = 11/279 (3%)
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
C+ N + + + D A +M+ I+ + + ++ LCK +H A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 206 QFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
F + ++ + TYS LIS A L M+++ +++ +N +DA
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
K G + EA ++ +M+ + ++PD FTYS I+ +C + + A + + M + PNV
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI-----QAHHCDHCEVSRAL 379
TYN +I CK +++E EL EM RG+ +T +Y + QA CD+ ++
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM---- 456
Query: 380 RLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ +M D P+ TYN +L L + G+ +KA V+E
Sbjct: 457 -VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 150/312 (48%), Gaps = 6/312 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAI--LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
G Q ++ ++ ++V G CK+ I ++ L +M E++ E N I+ + + +
Sbjct: 220 GCQPNLVTYGVVVN--GLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSIL 225
D A+ F M+ G++P + + L+ LC + A + D + T++ L
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I + K G +A +L+ M+ + D+ Y++ ++ C +DEA ++F M+SK
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P+ TY+ I+ +C A I + +M + L+ N TY +I + + A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+ +M+ GV P+ +YN + C + ++ +A+ + +++ P +TYN++++ +
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 406 RIGRFDKATEVW 417
+ G+ + +++
Sbjct: 517 KAGKVEDGWDLF 528
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 6/291 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G + +V ++ L+ L + ++++ L++M E +IN ++ F + A+ +
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIER---KINPNVVTFNALIDAFVKEGKL 346
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSIL 225
A + + M + I P I + L+ C + +A+ F+ S TY+ L
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I+G+ K + ELF+ M +G + + Y + + D A +F M+S V
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P+ TY+ + C + A V + ++R + P ++TYN +I+ +CK KVE+ ++
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
L + L+GVKPD YN + + C A L +M +D PD T
Sbjct: 527 LFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A LF M+ + +N L A+ K D ++ M + + +TY+I I+
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + I A +L KM + P++ T + ++ C ++ +A L+D+M+ G +P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
DT ++ + H + S A+ L+ RM + C P+ TY +V+ L + G D A
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
F KS L + ++ L+S K+ L + M G +L YN ++ C+
Sbjct: 73 FGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR 132
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
+ A + M+ EP T S ++ YC I A ++D+M P+ T
Sbjct: 133 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 192
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+ +I L ++K EA L+D M+ RG +P+ +Y + C ++ A L+++ME
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 252
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ Y+ V+ L + D A ++
Sbjct: 253 AAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 173/425 (40%), Gaps = 60/425 (14%)
Query: 47 PDLVSEISRVVSDHRHPH-HDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAK 105
P+L+ +SR++ R+ HDL L S +L+ +L+R + + F A
Sbjct: 43 PELLERVSRLLVLGRYEALHDLSLDF-------SDELLNSILRRLRLNPEACLEIFNLAS 95
Query: 106 SIPGFQHSVESFHILVEILGSCKQFAILWDFLTEM---------------RESSCCEINS 150
F+ +++ +V IL + + +L E+ R +
Sbjct: 96 KQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSP 155
Query: 151 DIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKP--------------------TIHDFDM 190
+F I K Y+ L A+ F M +G P +H +D
Sbjct: 156 TVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQ 215
Query: 191 LLYF---------------LCKRKHVKQAQQFFDQAKSHFLL--TAKTYSILISGWGKIG 233
++ F C+ +V +A F + +S L TY+ LI+G+ IG
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 275
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
D + + M ++G +++ Y + + CK G ++EA ++F + K++ D Y
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
+ + YC I A RV D M + N N +I CK+ ++ EA ++ M
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+KPD +YN + +C V AL+L +M + P TYN++LK RIG F
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 414 TEVWE 418
+W+
Sbjct: 456 LSLWK 460
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSK-RVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
+ YN + LCK G +++A +F D+LS R PD +TY+I IH A DI+ AF + D
Sbjct: 720 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRD 779
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
+M ++PN+ TYN +IK LCK V+ A LL ++ +G+ P+ +YN +
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839
Query: 374 EVSRALRLMSRM 385
V+ A+RL +M
Sbjct: 840 NVAEAMRLKEKM 851
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 5/268 (1%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
N+ I + Y ++ A + F RM+++ +KP H ++ L+ C+ +V +A +
Sbjct: 365 NTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLC 424
Query: 209 DQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
DQ + + T TY+IL+ G+ +IG L++ ML +G D ++ + L+AL K
Sbjct: 425 DQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKL 484
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR--RCNLLPNVF 325
G +EA ++ ++L++ + D T ++ I C ++ A +LD + RC P V
Sbjct: 485 GDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK--PAVQ 542
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
TY + K ++EA+ + + M +G+ P YN + + + +++ L+ +
Sbjct: 543 TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 602
Query: 386 EKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
P TY ++ IG DKA
Sbjct: 603 RARGLTPTVATYGALITGWCNIGMIDKA 630
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 136/344 (39%), Gaps = 43/344 (12%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVE---ILGSCKQFAILWDFLTEMRESSCCEINSDIF 153
A F +S G + +V +++ L+ ++G + + ++E S N +
Sbjct: 244 AMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSR----NVVTY 299
Query: 154 WFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS 213
+ K Y + L + A F + E + H + +L+ C+ ++ A + D
Sbjct: 300 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359
Query: 214 HFLLTAKTY-SILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
+ T T + LI+G+ K G +A ++F M D D YN +D C+ G VDE
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDE 419
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTY---------------------------CDA--- 302
A + M K V P TY+I + Y C
Sbjct: 420 ALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLE 479
Query: 303 -----NDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
D + A ++ + + LL + T N +I LCK +KV EA E+LD + + KP
Sbjct: 480 ALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKP 539
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
+Y A+ + + A + ME+ FP YN ++
Sbjct: 540 AVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLI 583
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 128/300 (42%), Gaps = 43/300 (14%)
Query: 160 YSRANLPDG-AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL- 217
Y NL + A++ + M+ GI PTI ++ L+ K +H+ + + ++ L
Sbjct: 552 YKVGNLKEAFAVKEY--MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTP 609
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
T TY LI+GW IG KA M+++G +++ + ++L + +DEA +
Sbjct: 610 TVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLL 669
Query: 278 HDML--------------------------------------SKRVEPDAFTYSIFIHTY 299
++ K + P+ Y++ I
Sbjct: 670 QKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGL 729
Query: 300 CDANDIHSAFRVL-DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
C A + A ++ D + +P+ +TY +I + +A+ L DEM L+G+ P+
Sbjct: 730 CKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPN 789
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+YNA+ C V RA RL+ ++ + P+ TYN ++ L++ G +A + E
Sbjct: 790 IVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKE 849
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQ--AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAM 245
+++ + LCK ++ A++ F + F+ TY+ILI G GD KA L M
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 246 LDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDI 305
+G +++ YN + LCK G VD A + H + K + P+A TY+ I + ++
Sbjct: 782 ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNV 841
Query: 306 HSAFRVLDKM 315
A R+ +KM
Sbjct: 842 AEAMRLKEKM 851
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
Query: 221 TYSILISGWGKIGDSGKARELFQAML--DQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
Y++ I+G K G AR+LF +L D+ P D Y + G +++A +
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP-DEYTYTILIHGCAIAGDINKAFTLRD 779
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
+M K + P+ TY+ I C ++ A R+L K+ + + PN TYN +I L K+
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839
Query: 339 KVEEAYELLDEMILRGV 355
V EA L ++MI +G+
Sbjct: 840 NVAEAMRLKEKMIEKGL 856
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 158/371 (42%), Gaps = 25/371 (6%)
Query: 63 PHHDLELSLNQFSAQISSDLVEQVL------------KRCKNLGFSAHRFFLWAKSIPGF 110
P + + +L++ + IS LV +VL RC L A++FF+W F
Sbjct: 92 PGFNTKSALDELNVSISGLLVREVLVGILRTLSFDNKTRCAKL---AYKFFVWCGGQENF 148
Query: 111 QHSVESFHILVEILGSCKQFAILWDFLTEMRE----SSCCEINSDIFWFIFKAYSRANLP 166
+H+ +H+L++I C ++ + + EM + ++ C N + A L
Sbjct: 149 RHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFN-----LLICTCGEAGLA 203
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSIL 225
+ F++ F +P H ++ +L+ L K K ++Q + F TY+I+
Sbjct: 204 RDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIV 263
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
+ ++G + + L M+ G DL YN L L G A N+ + M V
Sbjct: 264 MFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGV 323
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
EP ++ I A + + +D+ + P+V Y +I ++E+A E
Sbjct: 324 EPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEE 383
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+ EM +G P+ ++YN++ C + A L+ ME C P+ Y+ ++ L
Sbjct: 384 MFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLK 443
Query: 406 RIGRFDKATEV 416
G+ +A EV
Sbjct: 444 NAGKVLEAHEV 454
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 26/284 (9%)
Query: 76 AQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWD 135
A ++ D+VEQ +K K + ++HS + IL +LG KQ+ ++
Sbjct: 200 AGLARDVVEQFIKS-KTFNYRP------------YKHSYNA--ILHSLLG-VKQYKLIDW 243
Query: 136 FLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLY 193
+M E D+ + + A R D R M + G P ++ +++LL+
Sbjct: 244 VYEQMLEDG---FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLH 300
Query: 194 FLCKRKHVKQAQQFFDQAKSHFLLTAKT-YSILISGWGKIGDSGKARELFQAMLDQGCPV 252
L A + + + ++ LI G + G + + GC
Sbjct: 301 HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTP 360
Query: 253 DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
D++ Y + GG +++A +F +M K P+ FTY+ I +C A A +L
Sbjct: 361 DVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALL 420
Query: 313 DKM--RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
+M R CN PN Y+ ++ L KV EA+E++ +M+ +G
Sbjct: 421 KEMESRGCN--PNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 151/315 (47%), Gaps = 8/315 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
GF +V + +IL++ L + L EMR +S + D+F + + + +
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS---LMPDVFSYNTVIRGFCEGKEL 193
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSIL 225
+ A+ M G ++ + +L+ CK + +A F + K L Y+ L
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G+ G+ + + LF +L++G + YN + CK G + EA+ IF M+ + V
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P+ +TY+ I C A ++L+ M + PN TYN II +LCK+ V +A E
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF--PDRHTYNMVLKL 403
+++ M R +PD +YN + C ++ A +L+ M KD+ + PD +YN ++
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 404 LIRIGRFDKATEVWE 418
L + R +A ++++
Sbjct: 434 LCKENRLHQALDIYD 448
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 152/333 (45%), Gaps = 6/333 (1%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
C+NL L V S++ ++ K+ + EM+ S C
Sbjct: 153 CRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW-- 210
Query: 150 SDIFWFIF-KAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
S + W I A+ +A D A+ M G++ + + L+ C + + + F
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 209 DQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
D+ + A TY+ LI G+ K+G +A E+F+ M+++G ++ Y +D LC
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
G EA + + M+ K EP+A TY+I I+ C + A +++ M++ P+ TY
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRG--VKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
N ++ LC ++EA +LL M+ PD SYNA+ C + +AL + +
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Query: 386 EKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ DR T N++L ++ G +KA E+W+
Sbjct: 451 VEKLGAGDRVTTNILLNSTLKAGDVNKAMELWK 483
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 169/430 (39%), Gaps = 50/430 (11%)
Query: 30 CHHFHSLPTPQVFNPLLPDLVS--EISRVVSDHRHPHHDLELSLNQFSAQISSDLVE--- 84
C SL N L+PD+ S + R + + LEL+ + S LV
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217
Query: 85 QVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQF---AILWDFLTEMR 141
+ CK FL G + + + L+ C + L+D + E
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 142 ESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHV 201
+S C + + + + + + A F M E G++P ++ + L+ LC
Sbjct: 278 DSPC----AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 202 KQAQQFFD-QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNF 260
K+A Q + + A TY+I+I+ K G A E+ + M + D + YN
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 261 LDALCKGGCVDEATNIFHDML--SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD----- 313
L LC G +DEA+ + + ML S +PD +Y+ IH C N +H A + D
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 314 ------------------------------KMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
++ ++ N TY +I CK + A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
LL +M + ++P + YN + + C + +A RL M++DN FPD ++N+++
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 404 LIRIGRFDKA 413
++ G A
Sbjct: 574 SLKAGDIKSA 583
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 1/235 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKAREL 241
P + ++ L++ LCK + QA +D + T +IL++ K GD KA EL
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
++ + D + Y +D CK G ++ A + M ++P F Y+ + + C
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
+ A+R+ ++M+R N P+V ++N +I K ++ A LL M G+ PD ++
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
Y+ + + A+ +M PD H + VLK I G DK TE+
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTEL 656
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 146/316 (46%), Gaps = 10/316 (3%)
Query: 109 GFQHSVESFHILVEIL---GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANL 165
G + +V ++ L++ L G K+ L + + E E E N+ + I + L
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE----EPNAVTYNIIINKLCKDGL 367
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD---QAKSHFLLTAKTY 222
A+ M + +P +++LL LC + + +A + + S+ +Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 223 SILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS 282
+ LI G K +A +++ ++++ D + N L++ K G V++A ++ +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 283 KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEE 342
++ ++ TY+ I +C ++ A +L KMR L P+VF YNC++ LCK +++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 343 AYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
A+ L +EM PD S+N + ++ A L+ M + PD TY+ ++
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 403 LLIRIGRFDKATEVWE 418
+++G D+A ++
Sbjct: 608 RFLKLGYLDEAISFFD 623
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 103/242 (42%), Gaps = 35/242 (14%)
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG---- 267
K F ++IL+ G + + GKA L + M D+ +YN + C+G
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 268 ------------GC-------------------VDEATNIFHDMLSKRVEPDAFTYSIFI 296
GC +DEA +M +E D Y+ I
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
+CD ++ + D++ P TYN +I+ CK +++EA E+ + MI RGV+
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
P+ ++Y + C + AL+L++ M + + P+ TYN+++ L + G A E+
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 417 WE 418
E
Sbjct: 375 VE 376
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 97/198 (48%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
+ S L+ + ++ +G A + ML +G ++ +N L LC+ +A ++ +M
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ PD F+Y+ I +C+ ++ A + ++M+ ++ T+ +I CK K+
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
+EA L EM G++ D Y ++ CD E+ R L + + P TYN +
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 401 LKLLIRIGRFDKATEVWE 418
++ ++G+ +A+E++E
Sbjct: 289 IRGFCKLGQLKEASEIFE 306
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A +FQ +D G + A NN + L + + A + + ML + + S +
Sbjct: 57 AVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLE 115
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
Y AF VL M + NV+ +N ++K LC+N + +A LL EM + P
Sbjct: 116 CYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP 175
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
D +SYN + C+ E+ +AL L + M+ C T+ +++ + G+ D+A
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
NSD + + + + + + A +M ++P++ D++ LL LCK + QA + F
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 209 DQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
++ + + +++I+I G K GD A L M G DL Y+ ++ K
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612
Query: 268 GCVDEATNIFHDMLSKRVEPDA 289
G +DEA + F M+ EPDA
Sbjct: 613 GYLDEAISFFDKMVDSGFEPDA 634
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 144/305 (47%), Gaps = 2/305 (0%)
Query: 110 FQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGA 169
+ V ++ LV L ++F I + + EM + + + R + + A
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE-A 351
Query: 170 IRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISG 228
+ R+ +FG+ P + ++ L+ LCK + +A+ FD+ K TYSILI
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 229 WGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPD 288
+ + G A M+D G + + YN+ ++ CK G + A +M++K++EP
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 289 AFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
TY+ + YC I+ A R+ +M + P+++T+ ++ L + + +A +L +
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 349 EMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
EM VKP+ +YN + +C+ ++S+A + M + PD ++Y ++ L G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 409 RFDKA 413
+ +A
Sbjct: 592 QASEA 596
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGK 231
F RM + G++P + +L+ C+R + A F + + L+ Y+ LI+G K
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
GD A M+++ ++ Y + + C G +++A ++H+M K + P +T
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
++ + A I A ++ ++M N+ PN TYN +I+ C+ + +A+E L EM
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
+G+ PDT+SY + C + S A + + K NC + Y +L R G+ +
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 412 KATEV 416
+A V
Sbjct: 630 EALSV 634
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 164/385 (42%), Gaps = 26/385 (6%)
Query: 50 VSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPG 109
V + R+V R ++ LS S ++ + VE++L + RFF + G
Sbjct: 42 VDAVKRIVRGKRS--WEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRG 99
Query: 110 FQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN-SDIFWFIFKAYSRANLP-- 166
F HS SF IL+ L F W + ++ + SD+F +F Y + L
Sbjct: 100 FDHSTASFCILIHALVKANLF---WPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSS 156
Query: 167 -----------------DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF- 208
DG + + + + + P + LL+ L K +H A + F
Sbjct: 157 SSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFN 216
Query: 209 DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
D Y+ +I ++ D +A+E+ M GC V+++ YN +D LCK
Sbjct: 217 DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYN 328
V EA I D+ K ++PD TY ++ C + ++D+M P+ +
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS 336
Query: 329 CIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKD 388
+++ L K K+EEA L+ ++ GV P+ + YNA+ C + A L RM K
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 389 NCFPDRHTYNMVLKLLIRIGRFDKA 413
P+ TY++++ + R G+ D A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTA 421
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 1/238 (0%)
Query: 181 IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILISGWGKIGDSGKAR 239
+KP + + L+Y LCK + + + D+ F + S L+ G K G +A
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
L + ++D G +L YN +D+LCKG EA +F M + P+ TYSI I +
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
C + +A L +M L +V+ YN +I CK + A + EMI + ++P
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 472
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+Y ++ +C ++++ALRL M P +T+ +L L R G A +++
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 124/278 (44%), Gaps = 13/278 (4%)
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
CE+N + + + R + A+ M + G+ D D++ Y + +K
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV-----DLDLVCYGVLIDGSLKHKD 662
Query: 206 Q--FFDQAKSHFLLTAK----TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNN 259
+ FF K K Y+ +I K GD +A ++ M+++GC + + Y
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722
Query: 260 FLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAN-DIHSAFRVLDKMRRC 318
++ LCK G V+EA + M P+ TY F+ D+ A + + + +
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK- 781
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
LL N TYN +I+ C+ ++EEA EL+ MI GV PD +Y + C +V +A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 379 LRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ L + M + PDR YN ++ G KATE+
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 123/306 (40%), Gaps = 36/306 (11%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
N + + + R D A+ M + G+K +++ ++ L+ CK + A+ F
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 209 DQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
+ + L T TY+ L+ G+ G KA L+ M +G + + L L +
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
G + +A +F++M V+P+ TY++ I YC+ D+ AF L +M ++P+ ++Y
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 328 NCIIKRL-----------------------------------CKNDKVEEAYELLDEMIL 352
+I L C+ K+EEA + EM+
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
RGV D Y + H + L+ M PD Y ++ + G F +
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 413 ATEVWE 418
A +W+
Sbjct: 701 AFGIWD 706
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 146/356 (41%), Gaps = 44/356 (12%)
Query: 101 FLWAKSIPGFQHSVESFHILVEILGSCK--QFAILWDFLTEMRESSCCEINSDIFWFIFK 158
FL G + SV ++ L+ G CK + F+ EM E + +
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLIN--GHCKFGDISAAEGFMAEMINKKL-EPTVVTYTSLMG 480
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLL 217
Y + A+R + M GI P+I+ F LL L + ++ A + F++ A+ +
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQG---------------------------- 249
TY+++I G+ + GD KA E + M ++G
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 250 -------CPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA 302
C ++ + Y L C+ G ++EA ++ +M+ + V+ D Y + I
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 303 NDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY 362
D F +L +M L P+ Y +I K +EA+ + D MI G P+ +Y
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 363 NAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD--KATEV 416
A+ C V+ A L S+M+ + P++ TY L +L + G D KA E+
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVEL 775
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 153/354 (43%), Gaps = 44/354 (12%)
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRAN 164
I G H + + ++L+ Q + FL +M + DI F + + N
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG---FEPDIVTFTSLINGFCLGN 156
Query: 165 LPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-------- 216
+ A+ +M E GIKP + + ++ LCK HV A FDQ +++ +
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 217 ---------------------LTAK-------TYSILISGWGKIGDSGKARELFQAMLDQ 248
+T + T++ LI + K G A EL+ M+
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 249 GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSA 308
++ Y + ++ C GCVDEA +F+ M +K PD Y+ I+ +C + A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 309 FRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAH 368
++ +M + L N TY +I+ + K A E+ M+ RGV P+ +YN +
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 369 HCDHCEVSRALRL---MSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
C + +V +AL + M + E D P+ TYN++L L G+ +KA V+E+
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 9/258 (3%)
Query: 114 VESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIR 171
V +F+ L++ +F + EM S I +IF + + + D A +
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMS---IAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 172 SFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQ-FFDQAKSHFLLTAKTYSILISGWG 230
F M+ G P + + L+ CK K V A + F++ ++ TY+ LI G+G
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 231 KIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR---VEP 287
++G A+E+F M+ +G P ++ YN L LC G V +A IF DM + V P
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ +TY++ +H C + A V + MR+ + + TY II+ +CK KV+ A L
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 348 DEMILRGVKPDTWSYNAI 365
+ +GVKP+ +Y +
Sbjct: 484 CSLPSKGVKPNVVTYTTM 501
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 142/319 (44%), Gaps = 14/319 (4%)
Query: 110 FQHSVES--------FHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFW--FIFKA 159
F H VES F L+ ++ K+F ++ + ++ ++ D++ +
Sbjct: 60 FTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG---VSHDLYTCNLLMNC 116
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLT 218
+ +++ P A +M + G +P I F L+ C +++A +Q +
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
Y+ +I K G A LF M + G D++ Y + ++ LC G +A ++
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
M ++++PD T++ I + A + ++M R ++ PN+FTY +I C
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
V+EA ++ M +G PD +Y ++ C +V A+++ M + + TY
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT 356
Query: 399 MVLKLLIRIGRFDKATEVW 417
+++ ++G+ + A EV+
Sbjct: 357 TLIQGFGQVGKPNVAQEVF 375
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 40/277 (14%)
Query: 172 SFLR-MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGW 229
S LR M + IKP + F+ L+ K A++ +++ + TY+ LI+G+
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 230 GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM--------- 280
G +AR++F M +GC D++AY + ++ CK VD+A IF++M
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 281 --------------------------LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
+S+ V P+ TY++ +H C + A + +
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 315 MRRCNL---LPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCD 371
M++ + PN++TYN ++ LC N K+E+A + ++M R + +Y I C
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCK 472
Query: 372 HCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
+V A+ L + P+ TY ++ L R G
Sbjct: 473 AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 41/219 (18%)
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG---CVDEATNIFHDMLSKRVEP-- 287
G+SGKA F +LD V A+ N+ + L G +EA ++F M+ R P
Sbjct: 16 GNSGKALS-FSRLLDLSFWVR--AFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSI 72
Query: 288 ---------------------------------DAFTYSIFIHTYCDANDIHSAFRVLDK 314
D +T ++ ++ +C ++ + A L K
Sbjct: 73 IDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGK 132
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
M + P++ T+ +I C +++EEA ++++M+ G+KPD Y I C +
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
V+ AL L +ME PD Y ++ L GR+ A
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 185/423 (43%), Gaps = 22/423 (5%)
Query: 1 MSKMAFRSLFSRYKNLTSVVCPLFQHKQNCHH-FHSLPTPQVFNPLLPDLVSEISRVVSD 59
+ K+A R L S L S+V + + ++ H F L ++ D + ++ S
Sbjct: 103 LDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSC 162
Query: 60 HRHPH-HDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFH 118
PH + LN Q +D V ++ K+ LG A+ + ++
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVAN---------------IHVYN 207
Query: 119 ILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSFLRM 176
+LV L+EM E + DIF + + Y + ++ A+ RM
Sbjct: 208 VLVHACSKSGDPEKAEKLLSEMEEKG---VFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSG 236
+ G+ P I ++ ++ + +++A + F + K TY+ LI G+ ++ D
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDID 324
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
+A L + M +G ++ YN+ L LC+ G + EA + +M K++EPD T + I
Sbjct: 325 EALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLI 384
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
+ YC D+ SA +V KM L ++++Y +I CK ++E A E L MI +G
Sbjct: 385 NAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFS 444
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
P +Y+ + + + +L+ EK D Y +++ + ++ + D A +
Sbjct: 445 PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVL 504
Query: 417 WEN 419
+E+
Sbjct: 505 FES 507
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 156/368 (42%), Gaps = 52/368 (14%)
Query: 100 FFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRE----------------- 142
FF+W S+P +HS++S ++ IL K F L ++ +
Sbjct: 66 FFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGV 125
Query: 143 SSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVK 202
S E S +F ++ Y++A + + +I F ++ G+KP + +LL L K++
Sbjct: 126 SEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTD 185
Query: 203 QAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFL 261
+ F + K + Y++L+ K GD KA +L M ++G D+ YN +
Sbjct: 186 TVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLI 245
Query: 262 DALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH------------------------ 297
CK EA ++ M V P+ TY+ FIH
Sbjct: 246 SVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTA 305
Query: 298 ----------TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
YC NDI A R+ + M P V TYN I+++LC++ ++ EA LL
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
EM + ++PD + N + +C ++ A+++ +M + D ++Y ++ ++
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Query: 408 GRFDKATE 415
+ A E
Sbjct: 426 LELENAKE 433
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 5/249 (2%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILIS 227
A+ F +M E G+ P + F+ L+ LC V +A ++ L + TY +++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G K+GD+ A L M + D++ Y+ +D LCK G +A +F +ML K + P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ FTY+ I +C A R+L M + P+V T+N +I K K+ EA +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
DEM+ R + PDT +YN++ C H A + M PD T+N ++ + R
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRA 445
Query: 408 GRFDKATEV 416
R D+ ++
Sbjct: 446 KRVDEGMQL 454
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 157/331 (47%), Gaps = 12/331 (3%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
CK+ S ++ G +V +++ +++ S +++ L +M E EIN
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER---EIN 363
Query: 150 SDIFWFIFKAYSRANLPDGAIRSFLRM-DEF---GIKPTIHDFDMLLYFLCKRKHVKQAQ 205
D+ F A A++ +G + ++ DE I P ++ ++Y CK A+
Sbjct: 364 PDVL--TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 206 QFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
FD S ++T ++ +I + + + +L + + +G + YN + C
Sbjct: 422 HMFDLMASPDVVT---FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVF 325
+ ++ A ++F +M+S V PD T +I ++ +C+ + A + + ++ + +
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
YN II +CK KV+EA++L + + GV+PD +YN + + C +S A L +M
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 386 EKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ + PD TYN +++ ++ G DK+ E+
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 16/266 (6%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-------- 220
++ +F ++ + G +P + F+ LL+ LC + +A F L A
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219
Query: 221 --------TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
T++ LI+G G +A L M+ +G +D++ Y ++ +CK G
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
A N+ M ++PD YS I C A + +M + PNVFTYNC+I
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP 392
C + +A LL +MI R + PD ++NA+ + ++ A +L M FP
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 393 DRHTYNMVLKLLIRIGRFDKATEVWE 418
D TYN ++ + RFD A +++
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFD 425
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILIS 227
A+ +M+E IKP + + ++ LCK H AQ F + + TY+ +I
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ G A+ L + M+++ D+L +N + A K G + EA + +ML + + P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D TY+ I+ +C N A + D M P+V T+N II C+ +V+E +LL
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
E+ RG+ +T +YN + C+ ++ A L M PD T N++L
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 408 GRFDKATEVWE 418
+ ++A E++E
Sbjct: 516 EKLEEALELFE 526
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 5/246 (2%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGK 231
F M E GI P + ++ ++ C AQ+ D + T++ LIS K
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
G +A +L ML + D + YN+ + CK D+A ++F M S PD T
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVT 434
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
++ I YC A + ++L ++ R L+ N TYN +I C+ D + A +L EMI
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
GV PDT + N + C++ ++ AL L ++ D YN+++ + + + D
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 412 KATEVW 417
+A +++
Sbjct: 555 EAWDLF 560
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 1/219 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
F I Y RA D ++ + G+ ++ L++ C+ ++ AQ F +
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 213 SHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
SH + T +IL+ G+ + +A ELF+ + +D +AYN + +CKG VD
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
EA ++F + VEPD TY++ I +C + I A + KM+ P+ TYN +I
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
+ K +++++ EL+ EM G D ++ + C
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 109/256 (42%), Gaps = 6/256 (2%)
Query: 94 GFSAHRFFLWAKSIPGFQHS--VESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSD 151
GF H F AK + S V +F+ ++++ K+ L E+ N+
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA-NTT 468
Query: 152 IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA 211
+ + + + + A F M G+ P ++LLY C+ + +++A + F+
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 212 K-SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
+ S L Y+I+I G K +A +LF ++ G D+ YN + C +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAI 588
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
+A +FH M EPD TY+ I A +I + ++ +MR + FT
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMA 648
Query: 331 IKRLCK--NDKVEEAY 344
+ +C+ ++++ E Y
Sbjct: 649 EEIICRVSDEEIIENY 664
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
D A +++ M +R+ + ++++I I +CD + + + K+ + P+V T+N +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 331 IKRLCKNDKVE---------------EAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEV 375
+ LC D++ EA L D+M+ G+ P ++N + C V
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
A L+++M D TY ++ + ++G
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 5/249 (2%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILIS 227
A+ F +M E G+ P + F+ L+ LC V +A ++ L + TY +++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G K+GD+ A L M + D++ Y+ +D LCK G +A +F +ML K + P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ FTY+ I +C A R+L M + P+V T+N +I K K+ EA +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
DEM+ R + PDT +YN++ C H A + M PD T+N ++ + R
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRA 445
Query: 408 GRFDKATEV 416
R D+ ++
Sbjct: 446 KRVDEGMQL 454
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 157/331 (47%), Gaps = 12/331 (3%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
CK+ S ++ G +V +++ +++ S +++ L +M E EIN
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER---EIN 363
Query: 150 SDIFWFIFKAYSRANLPDGAIRSFLRM-DEF---GIKPTIHDFDMLLYFLCKRKHVKQAQ 205
D+ F A A++ +G + ++ DE I P ++ ++Y CK A+
Sbjct: 364 PDVLTF--NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 206 QFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
FD S ++T ++ +I + + + +L + + +G + YN + C
Sbjct: 422 HMFDLMASPDVVT---FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVF 325
+ ++ A ++F +M+S V PD T +I ++ +C+ + A + + ++ + +
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
YN II +CK KV+EA++L + + GV+PD +YN + + C +S A L +M
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 386 EKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ + PD TYN +++ ++ G DK+ E+
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 16/266 (6%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAK------- 220
++ +F ++ + G +P + F+ LL+ LC + +A F ++ FL
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219
Query: 221 --------TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
T++ LI+G G +A L M+ +G +D++ Y ++ +CK G
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
A N+ M ++PD YS I C A + +M + PNVFTYNC+I
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP 392
C + +A LL +MI R + PD ++NA+ + ++ A +L M FP
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 393 DRHTYNMVLKLLIRIGRFDKATEVWE 418
D TYN ++ + RFD A +++
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFD 425
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILIS 227
A+ +M+E IKP + + ++ LCK H AQ F + + TY+ +I
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ G A+ L + M+++ D+L +N + A K G + EA + +ML + + P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D TY+ I+ +C N A + D M P+V T+N II C+ +V+E +LL
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
E+ RG+ +T +YN + C+ ++ A L M PD T N++L
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 408 GRFDKATEVWE 418
+ ++A E++E
Sbjct: 516 EKLEEALELFE 526
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 5/246 (2%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGK 231
F M E GI P + ++ ++ C AQ+ D + T++ LIS K
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
G +A +L ML + D + YN+ + CK D+A ++F M S PD T
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVT 434
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
++ I YC A + ++L ++ R L+ N TYN +I C+ D + A +L EMI
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
GV PDT + N + C++ ++ AL L ++ D YN+++ + + + D
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 412 KATEVW 417
+A +++
Sbjct: 555 EAWDLF 560
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
F I Y RA D ++ + G+ ++ L++ C+ ++ AQ F +
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 213 SHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
SH + T +IL+ G+ + +A ELF+ + +D +AYN + +CKG VD
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
EA ++F + VEPD TY++ I +C + I A + KM+ P+ TYN +I
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
+ K +++++ EL+ EM G D ++ +
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
D A +++ M +R+ + ++++I I +CD + + + K+ + P+V T+N +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 331 IKRLCKNDKVE---------------EAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEV 375
+ LC D++ EA L D+M+ G+ P ++N + C V
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
A L+++M D TY ++ + ++G
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMG 275
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 143/310 (46%), Gaps = 7/310 (2%)
Query: 101 FLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDI--FWFIFK 158
FL S G + S+ L++ K++ I L +M E C DI + +
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC---KPDIVTYGILIH 423
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLL 217
+ D A+ +++ + G+ P ++ML+ LCK A+ F + + L
Sbjct: 424 GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILP 483
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
A Y+ LI G+ + GD +AR++F +++G VD++ +N + C+ G +DEA
Sbjct: 484 DAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACM 543
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+ M + + PD FTYS I Y D+ +A ++ M + PNV TY +I C
Sbjct: 544 NRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQ 603
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNA-IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
+ A E EM LR + P+ +Y I++ + + +A+ M + C P+ T
Sbjct: 604 GDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVT 663
Query: 397 YNMVLKLLIR 406
+N +L+ ++
Sbjct: 664 FNCLLQGFVK 673
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 129/307 (42%), Gaps = 2/307 (0%)
Query: 113 SVESFHILVEILGSCKQFAI-LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIR 171
SV+++ + + G C + + + L E R C N + I Y + + A
Sbjct: 202 SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYL 261
Query: 172 SFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTY-SILISGWG 230
F + G PT+ F ++ CK + + + K L + + + +I
Sbjct: 262 VFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKY 321
Query: 231 KIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAF 290
+ G E ++ C D+ YN ++ LCK G + A + K + P+
Sbjct: 322 RHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNL 381
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
+Y+ I YC + + A ++L +M P++ TY +I L + +++A + ++
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRF 410
I RGV PD YN + + C A L S M N PD + Y ++ IR G F
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF 501
Query: 411 DKATEVW 417
D+A +V+
Sbjct: 502 DEARKVF 508
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 145/359 (40%), Gaps = 59/359 (16%)
Query: 107 IPGFQHSVESFHILVEILGSCKQ--FAILWDFLTEMRESSCCEINSDIFWFIFKAYSRAN 164
+ GF ++E+F ++ G CK+ F L+E++E WF+ N
Sbjct: 268 LKGFMPTLETFGTMIN--GFCKEGDFVASDRLLSEVKERGL----RVSVWFL------NN 315
Query: 165 LPDGAIRSFLRMD---EFG------IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
+ D R ++D G KP + +++L+ LCK + A F D+A
Sbjct: 316 IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKG 375
Query: 216 LLTAK------------------------------------TYSILISGWGKIGDSGKAR 239
L+ TY ILI G G A
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
+ ++D+G D YN + LCK G A +F +ML + + PDA+ Y+ I +
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
+ D A +V + +V +N +IK C++ ++EA ++ M + PD
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
++Y+ I + +++ A+++ MEK+ C P+ TY ++ G F A E ++
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIF 295
G AR+++ M D+G VD + + +C G V+ + K P+ Y+
Sbjct: 187 GDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTI 246
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
I YC DI +A+ V +++ +P + T+ +I CK + LL E+ RG+
Sbjct: 247 IGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL 306
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
+ W N I H + + ++C PD TYN+++ L + G+ + A
Sbjct: 307 RVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAV 365
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 102/272 (37%), Gaps = 60/272 (22%)
Query: 159 AYSRANLPDGAIRS---------FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD 209
AY A L DG IRS F E G+K + + ++ C+ + +A +
Sbjct: 485 AYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMN 544
Query: 210 QAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
+ L+ K TYS +I G+ K D A ++F+ M C +++ Y + ++ C G
Sbjct: 545 RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQG 604
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC-DANDIHSAFRVLDKMRRCNLLPNVFTY 327
A F +M + + P+ TY+ I + +++ + A + M +PN T+
Sbjct: 605 DFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTF 664
Query: 328 NCIIKR-------------------------------------------------LCKND 338
NC+++ LC +
Sbjct: 665 NCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHG 724
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
V+ A D+M+ +G PD S+ AI C
Sbjct: 725 MVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
A ++FL L + +E ++ ++ ++ V+ S +H Y ++ + A + D +
Sbjct: 101 ACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYV 160
Query: 316 RRC-NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
+ +P+V N ++ L K+ ++ +A ++ DEM RG D +S + C+ +
Sbjct: 161 VELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGK 220
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
V +L+ C P+ YN ++ ++G + A V++
Sbjct: 221 VEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFK 264
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 117/242 (48%), Gaps = 3/242 (1%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDS 235
M E G +P + F L+ LC V QA D+ + Y +I+G K+GD+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEE---GHQPYGTIINGLCKMGDT 57
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIF 295
A L M + ++ YN +D LCK G A N+F +M K + PD TYS
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
I ++C + A ++L M + P+V T++ +I L K KV EA E+ +M+ RG+
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
P T +YN++ C ++ A R++ M +C PD T++ ++ + R D E
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 416 VW 417
++
Sbjct: 238 IF 239
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 1/268 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
+ I + + A+ +M+E IK + ++ ++ LCK H AQ F +
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 213 SHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
+ TYS +I + + G A +L + M+++ D++ ++ ++AL K G V
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
EA I+ DML + + P TY+ I +C + ++ A R+LD M + P+V T++ +I
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
CK +V+ E+ EM RG+ +T +Y + C ++ A L++ M
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWEN 419
P+ T+ +L L KA + E+
Sbjct: 284 PNYITFQSMLASLCSKKELRKAFAILED 311
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 108/243 (44%), Gaps = 5/243 (2%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIG 233
RM E G +P + ++ LCK + A + ++H Y+ +I K G
Sbjct: 35 RMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDG 90
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
A+ LF M D+G D++ Y+ +D+ C+ G +A + DM+ +++ PD T+S
Sbjct: 91 HHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFS 150
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I+ + A + M R + P TYN +I CK D++ +A +LD M +
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
PD +++ + +C V + + M + + TY ++ ++G D A
Sbjct: 211 SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 270
Query: 414 TEV 416
++
Sbjct: 271 QDL 273
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGK 231
F M + GI P + + ++ C+ A+Q D + T+S LI+ K
Sbjct: 99 FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVK 158
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
G +A E++ ML +G + YN+ +D CK +++A + M SK PD T
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
+S I+ YC A + + + +M R ++ N TY +I C+ ++ A +LL+ MI
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
GV P+ ++ ++ A C E+ +A ++ ++K
Sbjct: 279 SSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 178/388 (45%), Gaps = 27/388 (6%)
Query: 56 VVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWA----------- 104
V S + P+ + SL + ++ ++ QV+ ++ RFF+W
Sbjct: 45 VASLLKTPNWEKNSSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPT 104
Query: 105 ------KSIPGFQHSVESFHILVEILGSC----KQFAILWDFLTEMRESSCCEINSDIFW 154
K I + ++V ++ C K+ L E+RE +N +
Sbjct: 105 QKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYS 164
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KS 213
+ + ++ +L A ++ RM+ G + D+ ++ LCK + + A+ F + K
Sbjct: 165 SLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKI 224
Query: 214 HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDE 272
F+L + + L+ G+ + + A ++F M + C + ++Y+ + LC+ G ++E
Sbjct: 225 GFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEE 284
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM--RRCNLLPNVFTYNCI 330
A + M K +P TY++ I CD I AF + D+M R C PNV TY +
Sbjct: 285 AFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK--PNVHTYTVL 342
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
I LC++ K+EEA + +M+ + P +YNA+ +C V A L++ MEK C
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 391 FPDRHTYNMVLKLLIRIGRFDKATEVWE 418
P+ T+N +++ L R+G+ KA + +
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 10/273 (3%)
Query: 148 INSDIFWFIFKAYSRA-NLPDGAIRSFLRMD-EFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
++S I + + R NL D A++ F M E P + +L++ LC+ +++A
Sbjct: 228 LDSHIGTSLLLGFCRGLNLRD-ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAF 286
Query: 206 QFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
DQ + + +TY++LI G KA LF M+ +GC ++ Y +D L
Sbjct: 287 GLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGL 346
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
C+ G ++EA + M+ R+ P TY+ I+ YC + AF +L M + PNV
Sbjct: 347 CRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNV 406
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
T+N +++ LC+ K +A LL M+ G+ PD SYN + C ++ A +L+S
Sbjct: 407 RTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSS 466
Query: 385 MEKDNCF---PDRHTYNMVLKLLIRIGRFDKAT 414
M NCF PD T+ ++ + G+ D A+
Sbjct: 467 M---NCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 137/305 (44%), Gaps = 4/305 (1%)
Query: 113 SVESFHILVEILGSCKQFAILWDF-LTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIR 171
SV +++ L+ G CK ++ F L + E C+ N F + + R P A+
Sbjct: 370 SVITYNALIN--GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 172 SFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWG 230
RM + G+ P I +++L+ LC+ H+ A + + T++ +I+ +
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 231 KIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAF 290
K G + A ML +G +D + +D +CK G +A I ++ R+
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
+ ++ + + +L K+ + L+P+V TY ++ L ++ + ++ +L+ M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRF 410
L G P+ + Y I C V A +L+S M+ P+ TY +++K + G+
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 411 DKATE 415
D+A E
Sbjct: 668 DRALE 672
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 151/368 (41%), Gaps = 42/368 (11%)
Query: 89 RCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEI 148
R NL + F + +K + +SV S+ IL+ L + + +M E C +
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSV-SYSILIHGLCEVGRLEEAFGLKDQMGEKGC-QP 299
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
++ + + KA L D A F M G KP +H + +L+ LC+ +++A
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 209 DQ-AKSHFLLTAKTYSILISGWGK-----------------------------------I 232
+ K + TY+ LI+G+ K +
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
G KA L + MLD G D+++YN +D LC+ G ++ A + M +EPD T+
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 293 SIFIHTYCDAN--DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
+ I+ +C D+ SAF L M R + + T +I +CK K +A +L+ +
Sbjct: 480 TAIINAFCKQGKADVASAF--LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRF 410
+ + S N I C+V L ++ ++ K P TY ++ LIR G
Sbjct: 538 VKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Query: 411 DKATEVWE 418
+ + E
Sbjct: 598 TGSFRILE 605
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 114/265 (43%), Gaps = 28/265 (10%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILISGWGKIG 233
++++ G+ P++ + L+ L + + + + + K S L Y+I+I+G + G
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
+A +L AM D G + + Y + G +D A M+ + E + YS
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYS 690
Query: 294 IFIHTYC----------------------DANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
+ + D I+ V++++ C +F ++
Sbjct: 691 SLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF----LV 746
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
RLCK + +E+ +L+ ++ RGV + + + I +C + ++ + L++ + K
Sbjct: 747 TRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFV 805
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEV 416
P ++ +V++ L + G ++A E+
Sbjct: 806 PSFKSFCLVIQGLKKEGDAERAREL 830
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 167/374 (44%), Gaps = 37/374 (9%)
Query: 42 FNPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFF 101
++ LLP+L E+ ++ +P + +VL R ++ A FF
Sbjct: 59 YSVLLPNLRDEVKSLIPHLGYPE------------------ISRVLLRFQSDASRAITFF 100
Query: 102 LWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYS 161
W K G + +V ++ +L+ IL S K+F + FL E+ E + + D+F + A
Sbjct: 101 KWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSA-- 158
Query: 162 RANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAK 220
DE P + FDML+ K V++ + F + S F ++
Sbjct: 159 --------------TDECNWDPVV--FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVV 202
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
T + L++G K+ +++ M G + +N + C E + M
Sbjct: 203 TCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKM 262
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ EPD TY+ + +YC + AF + M R ++P++ TY +IK LCK+ +V
Sbjct: 263 EEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRV 322
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
EA++ M+ RG+KPD SYN + +C + ++ +L+ M ++ PDR T ++
Sbjct: 323 REAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVI 382
Query: 401 LKLLIRIGRFDKAT 414
++ +R GR A
Sbjct: 383 VEGFVREGRLLSAV 396
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 147/349 (42%), Gaps = 41/349 (11%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRE--------------SSCCEIN--SDI 152
G + +F+IL + + F + DFL +M E SS C +
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 153 FWFIFKAYSRANLPD--------------GAIR----SFLRMDEFGIKPTIHDFDMLLYF 194
F+ Y R +PD G +R +F RM + GIKP ++ L+Y
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 195 LCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVD 253
CK ++Q+++ + + ++ + T +++ G+ + G A + +
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIP 410
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDMLSKR---VEPDAFTYSIFIHTYCDANDIHSAFR 310
+ + +LC+ G A ++ ++ + +P+ + I + CDA I A
Sbjct: 411 FEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDA--IEEALV 468
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
+ K++ N + + TY +I LC+ + EA L+ EM VKPD++ A+ +C
Sbjct: 469 LKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYC 528
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG-RFDKATEVWE 418
+ +A RL+S + D +YN ++K + G + KA E+ E
Sbjct: 529 KELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQE 577
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 17/286 (5%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEM--RESSCCEINSDIFW 154
A FF W ++ GF H+ + + +L F LWDFL ++ RE+ + +
Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASIT 169
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS- 213
+ K A+ +F RM E+ KP ++ ++ ++ LC+ + K+A+ DQ +
Sbjct: 170 CLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLP 229
Query: 214 --HFLLTAKTYSILISGWGKIG-DSG----------KARELFQAMLDQGCPVDLLAYNNF 260
+ TY+ILIS + + G +G +A +F+ ML +G D++ YN
Sbjct: 230 GFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCL 289
Query: 261 LDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCN- 319
+D CK + A +F DM +K P+ TY+ FI Y N+I A ++ M++
Sbjct: 290 IDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGH 349
Query: 320 LLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
+P TY +I L + + EA +L+ EM+ G+ P ++Y +
Sbjct: 350 GVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 216 LLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
++T + + L+ G+ G +A F M + C D+ AYN ++ALC+ G +A
Sbjct: 162 VVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARF 221
Query: 276 IFHDML--SKRVEPDAFTYSIFIHTYCDAN-----------DIHSAFRVLDKMRRCNLLP 322
+ M R PD +TY+I I +YC + A R+ +M +P
Sbjct: 222 LLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVP 281
Query: 323 NVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLM 382
+V TYNC+I CK +++ A EL ++M +G P+ +YN+ ++ E+ A+ +M
Sbjct: 282 DVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMM 341
Query: 383 SRMEK-DNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
M+K + P TY ++ L+ R +A ++
Sbjct: 342 RTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDL 376
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 305 IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK--PDTWSY 362
+ A +M+ + P+V+ YN II LC+ ++A LLD+M L G + PDT++Y
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 363 NAIQAHHCDHC-------EVSRALRLMSRMEKDNCF----PDRHTYNMVLKLLIRIGRFD 411
+ + +C + + R + +RM ++ F PD TYN ++ + R
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 412 KATEVWEN 419
+A E++E+
Sbjct: 301 RALELFED 308
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 178/413 (43%), Gaps = 49/413 (11%)
Query: 47 PDLVSEI-SRVVSDHRHPHHDL--ELSLNQFSAQISSDLVEQVLKRC----KNLGFSAHR 99
P V+++ VV+ ++ +L EL L + S ++ +L RC + + +
Sbjct: 118 PKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIEC 177
Query: 100 FFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IF 157
F+L + GF E+ + ++ +L + W F +M EI S+++ F +
Sbjct: 178 FYLMKEK--GFYPKTETCNHILTLLSRLNRIENAWVFYADMYR---MEIKSNVYTFNIMI 232
Query: 158 KAYSRANLPDGAIRSFLR-MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-- 214
+ A + FL M+ FGIKPTI ++ L+ R ++ A+ + KS
Sbjct: 233 NVLCKEGKLKKA-KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 291
Query: 215 -------------------------------FLLTAKTYSILISGWGKIGDSGKARELFQ 243
+ + +Y+ILI G GD A
Sbjct: 292 QPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRD 351
Query: 244 AMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAN 303
M+ QG YN + L ++ A + ++ K + D+ TY+I I+ YC
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411
Query: 304 DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYN 363
D AF + D+M + P FTY +I LC+ +K EA EL ++++ +G+KPD N
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471
Query: 364 AIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ HC + RA L+ M+ + PD TYN +++ L G+F++A E+
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAREL 524
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 1/238 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAKTYSILISGWGKIGDSGKA 238
G+ PT + ++ L++ L ++ A+ + + +L + TY+ILI+G+ + GD+ KA
Sbjct: 357 GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKA 416
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
L M+ G Y + + LC+ EA +F ++ K ++PD + +
Sbjct: 417 FALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG 476
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
+C ++ AF +L +M ++ P+ TYNC+++ LC K EEA EL+ EM RG+KPD
Sbjct: 477 HCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
SYN + + + + A + M P TYN +LK L + + A E+
Sbjct: 537 HISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEEL 594
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 4/264 (1%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
I SR N + A + M IK ++ F++++ LCK +K+A+ F +
Sbjct: 196 ILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFG 255
Query: 216 LL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
+ T TY+ L+ G+ G AR + M +G D+ YN L +C G A+
Sbjct: 256 IKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RAS 312
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
+ +M + PD+ +Y+I I + D+ AF D+M + ++P +TYN +I L
Sbjct: 313 EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
+K+E A L+ E+ +G+ D+ +YN + +C H + +A L M D P +
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Query: 395 HTYNMVLKLLIRIGRFDKATEVWE 418
TY ++ +L R + +A E++E
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFE 456
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 145/310 (46%), Gaps = 5/310 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
GF+ S+ +F LV +F + ++ E N I+ I + +
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY-EPNVVIYNTIIDSLCEKGQVNT 202
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVK-QAQQFFDQAKSHFLLTAKTYSILIS 227
A+ M + GI+P + ++ L+ L A+ D + T+S LI
Sbjct: 203 ALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALID 262
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+GK G +A++ + M+ + +++ YN+ ++ LC G +DEA + + ++SK P
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP 322
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+A TY+ I+ YC A + ++L M R + + FTYN + + C+ K A ++L
Sbjct: 323 NAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL 382
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
M+ GV PD +++N + CDH ++ +AL + ++K TYN+++K L +
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKA 442
Query: 408 GRFDKATEVW 417
DK + W
Sbjct: 443 ---DKVEDAW 449
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 6/257 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G + V +++ L+ L + + L++M I+ D+ F + Y +
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMG---ISPDVITFSALIDVYGKEGQL 270
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAKTYSIL 225
A + + M + + P I ++ L+ LC + +A++ + S F A TY+ L
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I+G+ K ++ M G D YN C+ G A + M+S V
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
PD +T++I + CD I A L+ +++ + + TYN IIK LCK DKVE+A+
Sbjct: 391 HPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWY 450
Query: 346 LLDEMILRGVKPDTWSY 362
L + L+GV PD +Y
Sbjct: 451 LFCSLALKGVSPDVITY 467
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
F D A+SH L + +S L+ K+ LF+ + G DL ++ +D C+
Sbjct: 67 FCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCR 126
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
+ A + M+ EP T+ ++ +C N + A ++D++ PNV
Sbjct: 127 CARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVI 186
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
YN II LC+ +V A ++L M G++PD +YN++ + R++S M
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ PD T++ ++ + + G+ +A + +
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQY 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 7/252 (2%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK----SHFLLTAKTYSI 224
A+ F M E P+I DF LL + K + F + SH L + ++
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYS---FTT 119
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI + + A M+ G ++ + + ++ C EA ++ ++
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
EP+ Y+ I + C+ +++A VL M++ + P+V TYN +I RL + +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+L +M+ G+ PD +++A+ + ++ A + + M + + P+ TYN ++ L
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 405 IRIGRFDKATEV 416
G D+A +V
Sbjct: 300 CIHGLLDEAKKV 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 97/245 (39%), Gaps = 6/245 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G V +F L+++ G Q EM + S +N +I + + L
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS---VNPNIVTYNSLINGLCIHGLL 305
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSIL 225
D A + + G P ++ L+ CK K V + ++ TY+ L
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
G+ + G A ++ M+ G D+ +N LD LC G + +A D+ +
Sbjct: 366 YQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKT 425
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
TY+I I C A+ + A+ + + + P+V TY ++ L + EA+E
Sbjct: 426 VVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHE 485
Query: 346 LLDEM 350
L +M
Sbjct: 486 LYRKM 490
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 1/267 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
F + Y N + AI F ++ G KP + + L+ LCK +H+ A + F+Q
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG 215
Query: 213 SHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
++ TY+ L++G +IG G A L + M+ + +++ + +DA K G +
Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM 275
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
EA +++ M+ V PD FTY I+ C + A ++ M R PN Y +I
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
CK+ +VE+ ++ EM +GV +T +Y + +C A + ++M
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWE 418
PD TYN++L L G+ +KA ++E
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFE 422
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQ-FFDQAKSHFLLTAKTYSILISGWGKIGD 234
M + + P + + L+ LC + +A+Q F+ ++ Y+ LI G+ K
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
++F M +G + + Y + C G D A +F+ M S+R PD TY++
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
+ C + A + + MR+ + N+ TY II+ +CK KVE+A++L + +G
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
+KP+ +Y + + C + A L +M++D P+ Y
Sbjct: 464 MKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILISGWGKIG 233
+M + G +P + F LL C ++ A FDQ F TY+ LI K
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
A ELF M G +++ YN + LC+ G +A + DM+ +R+EP+ T++
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I + + A + + M + ++ P+VFTY +I LC ++EA ++ M
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
G P+ Y + C V +++ M + + TY ++++ +GR D A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 414 TEVW 417
EV+
Sbjct: 383 QEVF 386
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%)
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML 281
++ L+S K+ LF+ M G P L N + +C A+ M+
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 282 SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVE 341
EPD T++ ++ YC N I A + D++ PNV TY +I+ LCKN +
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 342 EAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
A EL ++M G +P+ +YNA+ C+ A L+ M K P+ T+ ++
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 402 KLLIRIGRFDKATEVW 417
+++G+ +A E++
Sbjct: 266 DAFVKVGKLMEAKELY 281
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 7/210 (3%)
Query: 125 GSCKQFAILWDFLTEMR------ESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE 178
GS ++ L E R E + C N I+ + + ++ + ++ F M +
Sbjct: 297 GSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ 356
Query: 179 FGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGK 237
G+ + +L+ C AQ+ F+Q S +TY++L+ G G K
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEK 416
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A +F+ M + ++++ Y + +CK G V++A ++F + SK ++P+ TY+ I
Sbjct: 417 ALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 476
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
+C IH A + KM+ LPN Y
Sbjct: 477 GFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A +LF M+ ++ + L + K D ++F M + P T +I +H
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
C ++ A L KM + P++ T+ ++ C +++E+A L D+++ G KP
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
+ +Y + C + ++ A+ L ++M + P+ TYN ++ L IGR+ A
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 162 RANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAK 220
R N + A + F M + G+ P ++ + ++ CK +V+QA + + + L
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
+ L+ G+ K + AR LF M+ G +L YN + CK G + EA + +M
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
S + PD FTY+I I+ C + + A R+ KM+ + P+ TYN +I CK +
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
E+A +L EM GV+P+ +++ + +C+ ++ A+ L M PD TY +
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 401 L 401
+
Sbjct: 486 I 486
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 143/323 (44%), Gaps = 8/323 (2%)
Query: 81 DLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILV-EILGSCKQFAILWDFLTE 139
L+E+ LKR +HR F + I + S+ F +L+ E L + + + L
Sbjct: 100 SLIER-LKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFL----EMGLFEEALWV 154
Query: 140 MRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRK 199
RE C +S I R D + M G+ P +H + +L K+
Sbjct: 155 SREMKCSP-DSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQG 213
Query: 200 HVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYN 258
+ ++ D+ S + Y+I I + +A ++F+ M G +L Y+
Sbjct: 214 LYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYS 273
Query: 259 NFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
+D CK G V +A ++ ++L + P+ + + +C A ++ +A + M +
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKF 333
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
+ PN++ YNC+I CK+ + EA LL EM + PD ++Y + C +V+ A
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 379 LRLMSRMEKDNCFPDRHTYNMVL 401
RL +M+ + FP TYN ++
Sbjct: 394 NRLFQKMKNERIFPSSATYNSLI 416
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 1/215 (0%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
N +F + + +A A F+ M +FG+ P ++ ++ L++ CK ++ +A
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 209 DQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
+ +S L TY+ILI+G +A LFQ M ++ YN+ + CK
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
+++A ++ +M + VEP+ T+S I YC+ DI +A + +M ++P+V TY
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY 362
+I K ++EA L +M+ G+ P+ ++
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 517
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 102/261 (39%), Gaps = 36/261 (13%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILIS 227
A+ M+ + P + + +L+ LC V +A + F + K+ + ++ TY+ LI
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ K + +A +L M G +++ ++ +D C + A ++ +M K + P
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT--------------------- 326
D TY+ I + ++ A R+ M + PN T
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Query: 327 --------------YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
+ C+I+ LC+N + A +M G+ PD SY ++ H
Sbjct: 538 QENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQE 597
Query: 373 CEVSRALRLMSRMEKDNCFPD 393
++ + L M K P+
Sbjct: 598 KRITDTMMLQCDMIKTGILPN 618
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 4/236 (1%)
Query: 123 ILGSCKQFAI--LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFG 180
I G CK++ + D +EM S E N F + Y A+ + M G
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGV-EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 181 IKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGKAR 239
I P + + L+ K ++K+A + + D ++ T++ L+ G+ K G A
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAI 534
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
+ +Q Q + + + ++ LC+ G + A+ F DM S + PD +Y + +
Sbjct: 535 DFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGH 594
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
I + M + +LPN+ + + N V+ A L + L+ V
Sbjct: 595 LQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKTV 650
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 6/303 (1%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
CKN + L G V +++ L+ L +++ L +M + S IN
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS---IN 243
Query: 150 SDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF 207
D+ F + + + D A + M + + P ++ ++ LC + A++
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303
Query: 208 FD-QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
FD A TY+ LISG+ K + +LFQ M +G D+ YN + C+
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
G + A +IF M+S+RV PD T+ I +H C +I SA D MR +
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
YN +I LCK DKVE+A+EL + + GVKPD +Y + C + A L+ RM+
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Query: 387 KDN 389
++
Sbjct: 484 EEG 486
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 1/266 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA-QQFFDQA 211
F + + R + A+ +M + G +P+I F LL+ C + A
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
KS + Y+ LI G K G+ A EL M +G D++ YN L LC G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
+A + DM+ + + PD T++ I + ++ A + +M + ++ PN TYN II
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
LC + ++ +A + D M +G P+ +YN + + C V ++L RM +
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVW 417
D TYN ++ ++G+ A +++
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIF 374
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 135/315 (42%), Gaps = 2/315 (0%)
Query: 100 FFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKA 159
+F + G H + SF IL+ C + + L +M + E + F +
Sbjct: 92 YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGY-EPSIVTFGSLLHG 150
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT- 218
+ N A + M + G +P + ++ L+ LCK + A + ++ + L
Sbjct: 151 FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD 210
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
TY+ L++G G A + + M+ + D++ + +D K G +DEA ++
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
+M+ V+P+ TY+ I+ C ++ A + D M PNV TYN +I CK
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
V+E +L M G D ++YN + +C ++ AL + M PD T+
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390
Query: 399 MVLKLLIRIGRFDKA 413
++L L G + A
Sbjct: 391 ILLHGLCVNGEIESA 405
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 1/245 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIG 233
+M+ +GI ++ F +L++ C+ + A + K + + T+ L+ G+ +
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
G A L M+ G +++ YN +D LCK G ++ A + ++M K + D TY+
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
+ C + A R+L M + ++ P+V T+ +I K ++EA EL EMI
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
V P+ +YN+I C H + A + M CFP+ TYN ++ + D+
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 414 TEVWE 418
++++
Sbjct: 336 MKLFQ 340
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 136/311 (43%), Gaps = 6/311 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G++ +V ++ L++ L + I + L EM + + +D+ + + +
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG---LGADVVTYNTLLTGLCYSGRW 227
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSIL 225
A R M + I P + F L+ K+ ++ +AQ+ + + +S TY+ +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I+G G A++ F M +GC +++ YN + CK VDE +F M +
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
D FTY+ IH YC + A + M + P++ T+ ++ LC N ++E A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
D+M +YN + C +V +A L R+ + PD TY +++ L
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 406 RIGRFDKATEV 416
+ G +A E+
Sbjct: 468 KNGPRREADEL 478
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
FF+ S L + ++ L++ + Q M G DL ++ + C+
Sbjct: 59 FFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCR 118
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
+ A ++ M+ EP T+ +H +C N I AF ++ M + PNV
Sbjct: 119 CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVV 178
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
YN +I LCKN ++ A ELL+EM +G+ D +YN + C S A R++ M
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
K + PD T+ ++ + ++ G D+A E+++
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 178/400 (44%), Gaps = 19/400 (4%)
Query: 17 TSVVCPLFQHKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQF-- 74
T+++ LF H + +L V PDLV+ V + D++L+LN
Sbjct: 192 TTLIHGLFLHNKASEAV-ALVDQMVQRGCQPDLVT--YGTVVNGLCKRGDIDLALNLLNK 248
Query: 75 --SAQISSDLV---EQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQ 129
+A+I +++V + CK G + +V +++ L+ L + +
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 130 FAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHD 187
++ L+ M E +IN ++ F + A+ + A + M + I P
Sbjct: 309 WSDASRLLSNMLEK---KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 188 FDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAML 246
+++L+ C + +A+Q F L +TY+ LI+G+ K ELF+ M
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
+G + + Y + + G D A +F M+S RV D TYSI +H C +
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
+A + +++ + N+F YN +I+ +CK KV EA++L + +KPD +YN +
Sbjct: 486 TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMI 542
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
+ C + A L +M++D P+ TYN +++ +R
Sbjct: 543 SGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 136/312 (43%), Gaps = 6/312 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G H + ++ I + Q ++ L +M + DI + Y +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG---YEPDIVTLSSLLNGYCHSKRI 169
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSIL 225
A+ +M E G KP F L++ L +A DQ + TY +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
++G K GD A L M +++ +N +D+LCK V+ A ++F +M +K +
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P+ TY+ I+ C+ A R+L M + PNV T+N +I K K+ EA +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
L +EMI R + PDT +YN + C H + A ++ M +C P+ TYN ++
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 406 RIGRFDKATEVW 417
+ R + E++
Sbjct: 410 KCKRVEDGVELF 421
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 11/258 (4%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSIL 225
D A+ +M+ IK + F+ ++ LCK +HV+ A F + ++ + TY+ L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I+ G A L ML++ +++ +N +DA K G + EA + +M+ + +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+PD TY++ I+ +C N + A ++ M + LPN+ TYN +I CK +VE+ E
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 346 LLDEMILRGVKPDTWSYNAI-----QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
L EM RG+ +T +Y I QA CD ++ + +M + D TY+++
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM-----VFKQMVSNRVPTDIMTYSIL 474
Query: 401 LKLLIRIGRFDKATEVWE 418
L L G+ D A +++
Sbjct: 475 LHGLCSYGKLDTALVIFK 492
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 5/232 (2%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKAREL 241
P I ++ L+ CK K V+ + F + L+ TY+ +I G+ + GD A+ +
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F+ M+ P D++ Y+ L LC G +D A IF + +E + F Y+ I C
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
A + A+ D ++ P+V TYN +I LC ++EA +L +M G P++ +
Sbjct: 516 AGKVGEAW---DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
YN + + C+ + + L+ M D T ++V +L GR DK+
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRLDKS 623
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 7/241 (2%)
Query: 183 PTIHDFDMLLYFLCKRKH----VKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKA 238
P+I +F+ LL + K + +Q SH L T YSI I+ + + A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT---YSIFINCFCRRSQLSLA 137
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+ M+ G D++ ++ L+ C + +A + M+ +PD FT++ IH
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
N A ++D+M + P++ TY ++ LCK ++ A LL++M +K +
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKAN 257
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+N I C + V A+ L + ME P+ TYN ++ L GR+ A+ +
Sbjct: 258 VVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLS 317
Query: 419 N 419
N
Sbjct: 318 N 318
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 138/313 (44%), Gaps = 9/313 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAI--LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
G Q + ++ +V G CK+ I + L +M E++ + N IF I + +
Sbjct: 218 GCQPDLVTYGTVVN--GLCKRGDIDLALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHV 274
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSIL 225
+ A+ F M+ GI+P + ++ L+ LC A + + + T++ L
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I + K G +A +L + M+ + D + YN ++ C +DEA +F M+SK
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P+ TY+ I+ +C + + +M + L+ N TY II+ + + A
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+ +M+ V D +Y+ + C + ++ AL + ++K + YN +++ +
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 406 RIGRFDKATEVWE 418
+ G K E W+
Sbjct: 515 KAG---KVGEAWD 524
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
F D KS + ++ L+S K+ L + M G DL Y+ F++ C+
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCR 130
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
+ A + M+ EPD T S ++ YC + I A ++D+M P+ FT
Sbjct: 131 RSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFT 190
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+ +I L ++K EA L+D+M+ RG +PD +Y + C ++ AL L+++ME
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ +N ++ L + + A +++
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 35/179 (19%)
Query: 270 VDEATNIFHDMLSKRVEP-----------------------------------DAFTYSI 294
VD+A ++F DM+ R P D +TYSI
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
FI+ +C + + A VL KM + P++ T + ++ C + ++ +A L+D+M+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
KPDT+++ + H + S A+ L+ +M + C PD TY V+ L + G D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 2/251 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILIS 227
A+ +M + G P+I + LL C + +A DQ + + T++ L+
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G + + +A L + M+ +GC DL+ Y ++ LCK G D A N+ + M ++E
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D Y+ I C + AF + +KM + P+VFTYN +I LC + +A LL
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN-CFPDRHTYNMVLKLLIR 406
+M+ + + PD +NA+ ++ A +L M K CFPD YN ++K +
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 407 IGRFDKATEVW 417
R ++ EV+
Sbjct: 369 YKRVEEGMEVF 379
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 184/409 (44%), Gaps = 20/409 (4%)
Query: 17 TSVVCPLFQHKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSL-NQFS 75
T++V LFQH + +L V PDLV+ + + + DL L+L N+
Sbjct: 184 TTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 76 -AQISSDLV--EQVLKRCKNLGFSAHRFFLWAK-SIPGFQHSVESFHILVEILGSCKQFA 131
+I +D+V ++ F L+ K G + V +++ L+ L + +++
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302
Query: 132 ILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIK-----PTIH 186
L++M E + IN D+ +F A A + +G + ++ + +K P +
Sbjct: 303 DASRLLSDMLEKN---INPDLVFF--NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 187 DFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAM 245
++ L+ CK K V++ + F + L+ TY+ LI G+ + D A+ +F+ M
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 246 LDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDI 305
+ G D++ YN LD LC G V+ A +F M + ++ D TY+ I C A +
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 306 HSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNA- 364
+ + + + PNV TY ++ C+ EEA L EM G P++ +YN
Sbjct: 478 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537
Query: 365 IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
I+A D E + A L+ M D T+ +V +L GR DK+
Sbjct: 538 IRARLRDGDEAASA-ELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKS 584
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 129/267 (48%), Gaps = 1/267 (0%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA- 211
F + A ++ N D I +M GI ++ + + + + C+R + A +
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
K + + T + L++G+ +A L M++ G D + + + L +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
EA + M+ K +PD TY I+ C + A +L+KM + + +V YN II
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
LCK +++A++L ++M +G+KPD ++YN + + C++ S A RL+S M + N
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWE 418
PD +N ++ ++ G+ +A ++++
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYD 344
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 12/257 (4%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILIS 227
A+ RM G +P + + ++ LCKR A ++ K Y+ +I
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G K A +LF M +G D+ YN + LC G +A+ + DML K + P
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCN-LLPNVFTYNCIIKRLCKNDKVEEAYEL 346
D ++ I + + A ++ D+M + P+V YN +IK CK +VEE E+
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 347 LDEMILRGVKPDTWSYNAI-----QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
EM RG+ +T +Y + QA CD+ ++ + +M D PD TYN++L
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM-----VFKQMVSDGVHPDIMTYNILL 433
Query: 402 KLLIRIGRFDKATEVWE 418
L G + A V+E
Sbjct: 434 DGLCNNGNVETALVVFE 450
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 2/283 (0%)
Query: 137 LTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLC 196
L E C+ + + + + PD A+ +M++ I+ + ++ ++ LC
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 197 KRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLL 255
K KH+ A F++ ++ + TY+ LIS G A L ML++ DL+
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 256 AYNNFLDALCKGGCVDEATNIFHDML-SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
+N +DA K G + EA ++ +M+ SK PD Y+ I +C + V +
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
M + L+ N TY +I + + A + +M+ GV PD +YN + C++
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
V AL + M+K + D TY +++ L + G+ + +++
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
F D KS + +S L+S K+ L + M + G +L Y+ F++ C+
Sbjct: 63 FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCR 122
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
+ A I M+ P T + ++ +C N I A ++D+M P+ T
Sbjct: 123 RSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 182
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+ ++ L +++K EA L++ M+++G +PD +Y A+ C E AL L+++ME
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
K D YN ++ L + D A +++
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 1/311 (0%)
Query: 110 FQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGA 169
F++S+ + I++ LG K F L L ++ + IF + + R LP A
Sbjct: 43 FRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRA 102
Query: 170 IRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGW 229
+ F M ++ + T+ + LL L K +++ ++ A TY+ILI G
Sbjct: 103 LHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGC 162
Query: 230 GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK-RVEPD 288
+ G A +LF M+ + + + + LCK V EA + HDML V P
Sbjct: 163 SQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPT 222
Query: 289 AFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
Y+ I C ++ AF++ D+ + + Y+ +I L K + E +L+
Sbjct: 223 VHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILE 282
Query: 349 EMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
EM +G KPDT +YN + C + A R++ M + PD +YNM+L + RI
Sbjct: 283 EMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIK 342
Query: 409 RFDKATEVWEN 419
++++AT ++E+
Sbjct: 343 KWEEATYLFED 353
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 121/252 (48%), Gaps = 2/252 (0%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF-FDQAKSHFLL-TAKTYSI 224
D A++ F M + +KPT F L++ LCK VK+A + D K + + T Y+
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYAS 228
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI +IG+ A +L + VD Y+ + +L K G +E + I +M K
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+PD TY++ I+ +C ND SA RVLD+M L P+V +YN I+ + K EEA
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEAT 348
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
L ++M RG PDT SY + C+ + A ++ M P R L+ L
Sbjct: 349 YLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKL 408
Query: 405 IRIGRFDKATEV 416
G+ + ++V
Sbjct: 409 CESGKLEILSKV 420
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 105/240 (43%), Gaps = 3/240 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + +V + L++ L + + + E E ++++ I+ + + +A +
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI-KVDAAIYSTLISSLIKAGRSNE 276
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILIS 227
M E G KP +++L+ C + A + D+ L +Y++++
Sbjct: 277 VSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILG 336
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+ +I +A LF+ M +GC D L+Y D LC+G +EA I +ML K +P
Sbjct: 337 VFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
F+ C++ + +V+ + R + + ++ +I +CK + ++ +LL
Sbjct: 397 RRDRLEGFLQKLCESGKLEILSKVISSLHR-GIAGDADVWSVMIPTMCKEPVISDSIDLL 455
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 131/258 (50%), Gaps = 11/258 (4%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSIL 225
D A+ +M+ I+ + + ++ LCK +H A F + ++ + TYS L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
IS G A L M+++ +L+ ++ +DA K G + +A ++ +M+ + +
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+P+ FTYS I+ +C + + A ++L+ M R + LPNV TYN +I CK +V++ E
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 346 LLDEMILRGVKPDTWSYNAI-----QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
L EM RG+ +T +Y + QA CD+ ++ + +M P+ TYN++
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM-----VFKQMVSVGVHPNILTYNIL 469
Query: 401 LKLLIRIGRFDKATEVWE 418
L L + G+ KA V+E
Sbjct: 470 LDGLCKNGKLAKAMVVFE 487
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 145/316 (45%), Gaps = 10/316 (3%)
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMR----ESSCCEINSDIFWFIFKAYSR 162
I G H++ +++IL+ C + ++ L +M E +NS + +
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNS-----LLNGFCH 160
Query: 163 ANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKT 221
N A+ +M E G KP F L++ L +A D+ + T
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML 281
Y +++G K GD+ A L M +++ Y+ +D+LCK D+A N+F +M
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 282 SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVE 341
+K V P+ TYS I C+ A R+L M + PN+ T++ +I K K+
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 342 EAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
+A +L +EMI R + P+ ++Y+++ C + A +++ M + +C P+ TYN ++
Sbjct: 341 KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400
Query: 402 KLLIRIGRFDKATEVW 417
+ R DK E++
Sbjct: 401 NGFCKAKRVDKGMELF 416
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIG 233
+M + G +P I + LL C + A DQ + + T++ LI G
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
+ +A L M+ +GC DL+ Y ++ LCK G D A N+ + M + ++E + YS
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I + C A + +M + PNV TY+ +I LC + +A LL +MI R
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+ P+ +++A+ ++ +A +L M K + P+ TY+ ++ + R +A
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 414 TEVWE 418
++ E
Sbjct: 378 KQMLE 382
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 1/203 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLL-YFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILIS 227
A R M E I P + F L+ F+ K K VK + + + K TYS LI+
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ + G+A+++ + M+ + C +++ YN ++ CK VD+ +F +M + +
Sbjct: 367 GFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ TY+ IH + A D +A V +M + PN+ TYN ++ LCKN K+ +A +
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Query: 348 DEMILRGVKPDTWSYNAIQAHHC 370
+ + ++PD ++YN + C
Sbjct: 487 EYLQRSTMEPDIYTYNIMIEGMC 509
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A LF M ++ ++ L A+ K D + M + + +TY+I I+
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+C + + A +L KM + P++ T N ++ C +++ +A L+D+M+ G KP
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
DT ++ + H + S A+ L+ RM + C PD TY V+ L + G D A
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 156/376 (41%), Gaps = 72/376 (19%)
Query: 116 SFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLR 175
+++ ++ +L Q + + TEM C ++ + + +Y + D AIR F
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILISGWGKIGD 234
M + ++PT + LL K V++A F++ K + T TY+ LI G GK G
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR---------- 284
+A ++ ML G D++ NN ++ L K G V+E TN+F +M R
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT 378
Query: 285 --------------------------VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
V P FTYSI I YC N + A +L++M
Sbjct: 379 VIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK 438
Query: 319 NLLP---------------------------------NVFT--YNCIIKRLCKNDKVEEA 343
P NV + Y +IK K K+ EA
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
+L +EM +G PD ++YNA+ + ++ A L+ +ME++ C D +++N++L
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNG 558
Query: 404 LIRIGRFDKATEVWEN 419
R G +A E++E
Sbjct: 559 FARTGVPRRAIEMFET 574
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 145/351 (41%), Gaps = 4/351 (1%)
Query: 66 DLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILG 125
D E +L ++ LV +L+ + FF WA FQH ++ L+ L
Sbjct: 79 DAEKALEVLKLKVDHRLVRSILEIDVEINVKIQ-FFKWAGKRRNFQHDCSTYMTLIRCLE 137
Query: 126 SCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTI 185
+ + ++ + E+ ++ ++ + + KA RA + A+ F + KPT
Sbjct: 138 EARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTS 197
Query: 186 HDFDMLLYFLCKRKHVKQAQQFFDQA--KSHFLLTAKTYSILISGWGKIGDSGKARELFQ 243
++ ++ L + ++ + + + + TYS LIS + K+G + A LF
Sbjct: 198 STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFD 257
Query: 244 AMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAN 303
M D Y L K G V++A ++F +M P +TY+ I A
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 304 DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYN 363
+ A+ M R L P+V N ++ L K +VEE + EM + P SYN
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYN 377
Query: 364 A-IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
I+A VS +M+ D+ P TY++++ + R +KA
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKA 428
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 3/223 (1%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
+ + Y + N + A+ MDE G P + L+ L K K + A + F + K
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 213 SHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
+F ++++ Y+++I +GK G +A +LF M +QG D+ AYN + + K G ++
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
EA ++ M D +++I ++ + A + + ++ + P+ TYN ++
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL 591
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI--QAHHCDH 372
EEA ++ EM +G + D +Y++I + DH
Sbjct: 592 GCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDH 634
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 7/312 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G +V ++ L++ LG + + F +M + D+ + + +
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG---LTPDVVFLNNLMNILGKVGRV 354
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRK-HVKQAQQFFDQAKSHFLLTAK-TYSI 224
+ F M + PT+ ++ ++ L + K HV + +FD+ K+ + ++ TYSI
Sbjct: 355 EELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSI 414
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI G+ K KA L + M ++G P AY + ++AL K + A +F ++
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+ Y++ I + + A + ++M+ P+V+ YN ++ + K + EA
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN 534
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
LL +M G + D S+N I RA+ + ++ PD TYN +L
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCF 594
Query: 405 IRIGRFDKATEV 416
G F++A +
Sbjct: 595 AHAGMFEEAARM 606
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG-VKPDTWSYNAIQAHHCDH 372
K R+C P TYN +I L + + E+ +E+ EM G PDT +Y+A+ + +
Sbjct: 189 KGRKCK--PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKL 246
Query: 373 CEVSRALRLMSRMEKDNCF-PDRHTYNMVLKLLIRIGRFDKATEVWE 418
A+RL M KDNC P Y +L + ++G+ +KA +++E
Sbjct: 247 GRNDSAIRLFDEM-KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFE 292
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 141/341 (41%), Gaps = 24/341 (7%)
Query: 94 GFSAHRFFLWAKSIPGFQ--HSVE----SFHILVEI--------------LGSCKQFAIL 133
G A +F W PG + H V+ + HILV L S K +
Sbjct: 90 GKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVF 149
Query: 134 WDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLY 193
+T R C N ++ + + Y R + ++ F M +G P+++ + +L
Sbjct: 150 GALMTTYR---LCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILG 206
Query: 194 FLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPV 252
+ K F + K T++ILI+ G K+ L Q M G
Sbjct: 207 SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAP 266
Query: 253 DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
++ YN L CK G A + M SK V+ D TY++ IH C +N I + +L
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 326
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
MR+ + PN TYN +I KV A +LL+EM+ G+ P+ ++NA+ H
Sbjct: 327 RDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISE 386
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
AL++ ME P +Y ++L L + FD A
Sbjct: 387 GNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 132/302 (43%), Gaps = 2/302 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G S S+ +L++ L +F + F M+ + C + + + + D
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC-VGRITYTGMIDGLCKNGFLDE 461
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILIS 227
A+ M + GI P I + L+ CK K A++ + + YS LI
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
++G +A +++AM+ +G D +N + +LCK G V EA M S + P
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 581
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ ++ I+ Y ++ + AF V D+M + P FTY ++K LCK + EA + L
Sbjct: 582 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFL 641
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
+ DT YN + C +++A+ L M + + PD +TY ++ L R
Sbjct: 642 KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRK 701
Query: 408 GR 409
G+
Sbjct: 702 GK 703
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 143/330 (43%), Gaps = 2/330 (0%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
CK F A L G V ++++L+ L + A + L +MR+ N
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR-MIHPN 337
Query: 150 SDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD 209
+ + +S A + M FG+ P F+ L+ + K+A + F
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 210 QAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
++ L ++ +Y +L+ G K + AR + M G V + Y +D LCK G
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYN 328
+DEA + ++M ++PD TYS I+ +C +A ++ ++ R L PN Y+
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 329 CIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKD 388
+I C+ ++EA + + MIL G D +++N + C +V+ A M M D
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 389 NCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
P+ +++ ++ G KA V++
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFD 607
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 2/250 (0%)
Query: 167 DGAIRSFLR-MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSI 224
D ++ SFL+ M + I P + F++L+ LC +++ + KS + T TY+
Sbjct: 214 DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 273
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
++ + K G A EL M +G D+ YN + LC+ + + + DM +
Sbjct: 274 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 333
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+ P+ TY+ I+ + + + A ++L++M L PN T+N +I +EA
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
++ M +G+ P SY + C + E A RM+++ R TY ++ L
Sbjct: 394 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 453
Query: 405 IRIGRFDKAT 414
+ G D+A
Sbjct: 454 CKNGFLDEAV 463
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 124/301 (41%), Gaps = 40/301 (13%)
Query: 157 FKAYSRANLPDG----AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
F A ++ +G A++ F M+ G+ P+ + +LL LCK A+ F+ + K
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435
Query: 213 SHFLLTAK------------------------------------TYSILISGWGKIGDSG 236
+ + + TYS LI+G+ K+G
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
A+E+ + G + + Y+ + C+ GC+ EA I+ M+ + D FT+++ +
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 555
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
+ C A + A + M +LPN +++C+I + + +A+ + DEM G
Sbjct: 556 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 615
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
P ++Y ++ C + A + + + D YN +L + + G KA +
Sbjct: 616 PTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675
Query: 417 W 417
+
Sbjct: 676 F 676
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 2/231 (0%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAML 246
F++L+ LCK V +A++F S +L ++ LI+G+G G+ KA +F M
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
G Y + L LCKGG + EA + + D Y+ + C + ++
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG-VKPDTWSYNAI 365
A + +M + ++LP+ +TY +I LC+ K A E RG V P+ Y
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730
Query: 366 QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ + +M+ PD T N ++ R+G+ +K ++
Sbjct: 731 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 121/251 (48%), Gaps = 4/251 (1%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA--KSHFLLTAKTYSILI 226
A+ F M + I P + + L+ LC++ A F +A + + L Y+ +
Sbjct: 672 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 731
Query: 227 SGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
G K G KA F+ +D G D++ N +D + G +++ ++ +M ++
Sbjct: 732 DGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 790
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P+ TY+I +H Y D+ ++F + + +LP+ T + ++ +C+++ +E +
Sbjct: 791 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 850
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+L I RGV+ D +++N + + C + E++ A L+ M D+ T + ++ +L
Sbjct: 851 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 910
Query: 406 RIGRFDKATEV 416
R RF ++ V
Sbjct: 911 RNHRFQESRMV 921
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIG 233
+MD G P I + ++ + +++ + + TY+IL+ G+ K
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
D + L+++++ G D L ++ + +C+ ++ I + + VE D +T++
Sbjct: 809 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
+ I C +I+ AF ++ M + + T + ++ L +N + +E+ +L EM +
Sbjct: 869 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 928
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
G+ P++ Y + C ++ A + M P + +++ L + G+ D+A
Sbjct: 929 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988
Query: 414 T 414
T
Sbjct: 989 T 989
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 2/236 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKA 238
G++ + F+ML+ C + A S + L T ++S + ++
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
R + M QG + Y ++ LC+ G + A + +M++ ++ P S +
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 978
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
A +L M + L+P + ++ ++ CKN V EA EL M G+K D
Sbjct: 979 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 1038
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK-LLIRIGRFDKA 413
SYN + C +++ A L M+ D + TY +++ LL R F A
Sbjct: 1039 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGA 1094
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%)
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
Y I I Y I + + M P+V+T N I+ + K+ + + L EM
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRF 410
+ R + PD ++N + C ++ LM +MEK P TYN VL + GRF
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 411 DKATEVWE 418
A E+ +
Sbjct: 285 KAAIELLD 292
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 87/198 (43%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
T+++LIS G+ A +L + M G +D + + L + E+ + H+M
Sbjct: 866 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ + P++ Y I+ C DI +AF V ++M + P + +++ L K K
Sbjct: 926 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 985
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
+EA LL M+ + P S+ + C + V AL L M D +YN++
Sbjct: 986 DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045
Query: 401 LKLLIRIGRFDKATEVWE 418
+ L G A E++E
Sbjct: 1046 ITGLCAKGDMALAFELYE 1063
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 2/223 (0%)
Query: 196 CKRKHVKQAQQFFDQAKSHFLLTAK--TYSILISGWGKIGDSGKARELFQAMLDQGCPVD 253
CK + A FF+ A +L TY+ L+S ++G + R+L + + D+G D
Sbjct: 182 CKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFD 241
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
+ Y+N++ KGG + +A +M+ K + D +YSI I ++ A +L
Sbjct: 242 CVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLG 301
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
KM + + PN+ TY II+ LCK K+EEA+ L + ++ G++ D + Y + C
Sbjct: 302 KMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKG 361
Query: 374 EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
++RA ++ ME+ P TYN V+ L GR +A EV
Sbjct: 362 NLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV 404
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 94/192 (48%)
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML 281
Y+I+I+G K G KA L +G ++ + YN+ ++ LC+ GC+ EA +F +
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 282 SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVE 341
+ + P TY I I C A ++LD M L+PN+ YN I+ CK + E
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777
Query: 342 EAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
+A ++ ++ V PD ++ +++ +C ++ AL + + + N D + ++
Sbjct: 778 DAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLI 837
Query: 402 KLLIRIGRFDKA 413
K GR ++A
Sbjct: 838 KGFCTKGRMEEA 849
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 9/208 (4%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKA 238
G+ ++ L+ LC++ + +A + FD ++ L+ ++ TY ILI K G A
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+L +M+ +G +++ YN+ +D CK G ++A + + RV PDAFT S I
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKG 804
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM-------- 350
YC D+ A V + + N+ + F + +IK C ++EEA LL EM
Sbjct: 805 YCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVK 864
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
++ V + +I+ + CE R
Sbjct: 865 LINRVDAELAESESIRGFLVELCEQGRV 892
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 8/230 (3%)
Query: 192 LYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQG-- 249
+ LCKR + A + + + L +IL + + D+ ++ + + +++ G
Sbjct: 593 ILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKT----LVDNLRSLDAYLLVVNAGET 648
Query: 250 --CPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHS 307
+D++ Y ++ LCK G + +A N+ S+ V + TY+ I+ C +
Sbjct: 649 TLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVE 708
Query: 308 AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQA 367
A R+ D + L+P+ TY +I LCK +A +LLD M+ +G+ P+ YN+I
Sbjct: 709 ALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVD 768
Query: 368 HHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+C + A+R++SR PD T + ++K + G ++A V+
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVF 818
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 13/293 (4%)
Query: 133 LWDFLTEMRESSCCEINSDI--FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDM 190
L D L + RE +N D+ + + S+ + A+ +M + G++P + +
Sbjct: 258 LVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTA 317
Query: 191 LLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQG 249
++ LCK +++A F++ S + + Y LI G + G+ +A + M +G
Sbjct: 318 IIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRG 377
Query: 250 CPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAF 309
+L YN ++ LC G V EA D +SK V D TYS + +Y +I +
Sbjct: 378 IQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVL 432
Query: 310 RVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHH 369
+ + + ++ N ++K EA L M + PDT +Y + +
Sbjct: 433 EIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGY 492
Query: 370 CDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV----WE 418
C ++ AL + + + K + YN ++ L + G D ATEV WE
Sbjct: 493 CKTGQIEEALEMFNELRKSSV-SAAVCYNRIIDALCKKGMLDTATEVLIELWE 544
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 7/243 (2%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDS 235
M++ GI+P+I ++ ++ LC V +A D+ + TYS L+ + K+ +
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEA----DEVSKGVVGDVITYSTLLDSYIKVQNI 428
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIF 295
E+ + L+ P+DL+ N L A G EA ++ M + PD TY+
Sbjct: 429 DAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATM 488
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
I YC I A + +++R+ ++ V YN II LCK ++ A E+L E+ +G+
Sbjct: 489 IKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGL 547
Query: 356 KPDT-WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
D S + + H + + L L+ +E+ N N + LL + G F+ A
Sbjct: 548 YLDIHTSRTLLHSIHANGGD-KGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAI 606
Query: 415 EVW 417
EV+
Sbjct: 607 EVY 609
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 1/202 (0%)
Query: 185 IHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQ 243
+ D+ +++ LCK + +A AKS + L TY+ LI+G + G +A LF
Sbjct: 655 VIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 244 AMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAN 303
++ + G + Y +D LCK G +A + M+SK + P+ Y+ + YC
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLG 774
Query: 304 DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYN 363
A RV+ + + P+ FT + +IK CK +EEA + E + + D + +
Sbjct: 775 QTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 364 AIQAHHCDHCEVSRALRLMSRM 385
+ C + A L+ M
Sbjct: 835 FLIKGFCTKGRMEEARGLLREM 856
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 131/268 (48%), Gaps = 9/268 (3%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
A F +A P F+HS S IL+ LG + F ++ D L + R SS + +IF ++
Sbjct: 67 AKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHR-SSGYPLTGEIFTYL 125
Query: 157 FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCK-RKHVKQAQQFFDQAKSHF 215
K Y+ A LP+ + +F +M EF P + +L L R ++++A + F ++ H
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHG 185
Query: 216 LL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
++ ++Y++L+ + D A +LF ML++ D+ +Y + C+ G V+ A
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
+ DML+K PD I CD + L++M P+ NC++K
Sbjct: 246 ELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 301
Query: 335 CKNDKVEEAYELLDEMILRG--VKPDTW 360
C KVEEA ++++ ++ G + DTW
Sbjct: 302 CSFGKVEEACDVVEVVMKNGETLHSDTW 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 5/207 (2%)
Query: 213 SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK-GGCVD 271
S + LT + ++ LI + + K F ML+ N LD L G +
Sbjct: 113 SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
+A +F V P+ +Y++ + +C +D+ A+++ KM +++P+V +Y +I
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
+ C+ +V A ELLD+M+ +G PD + CD + + M
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGL----CDQGMFDEGKKYLEEMISKGFS 288
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWE 418
P N ++K G+ ++A +V E
Sbjct: 289 PHFSVSNCLVKGFCSFGKVEEACDVVE 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 275 NIFHDMLSKR------VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYN 328
N+ D+L+K + + FTY I Y +A KM N P N
Sbjct: 101 NLIDDVLAKHRSSGYPLTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLN 158
Query: 329 CIIKRLCKNDK-VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
I+ L + +++A+EL L GV P+T SYN + C + ++S A +L +M +
Sbjct: 159 RILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLE 218
Query: 388 DNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ PD +Y ++++ R G+ + A E+ ++
Sbjct: 219 RDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 1/240 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAKTYSILISGWGKIGDSGKA 238
G KP + LLY LCK +K+A + + S + A Y+ L++ K G+ G A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+L + M D G P + + YN + LC G ++++ ++ K + P+AFTYS +
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
A ++LD++ PN+ +YN ++ CK + ++A L E+ +G K +
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
SYN + C A L++ M+ + P TYN+++ L GR ++A +V +
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 3/253 (1%)
Query: 162 RANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAK 220
+AN AIR M GI P + L+ LCKR +V A Q ++ + H +
Sbjct: 118 KANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTV 177
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TY+ L+ G +G ++ + + ++ +G + Y+ L+A K DEA + ++
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ K EP+ +Y++ + +C A + ++ NV +YN +++ LC + +
Sbjct: 238 IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW 297
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN--CFPDRHTYN 398
EEA LL EM P +YN + H +AL+++ M K N +YN
Sbjct: 298 EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYN 357
Query: 399 MVLKLLIRIGRFD 411
V+ L + G+ D
Sbjct: 358 PVIARLCKEGKVD 370
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 48/285 (16%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-----AKSHFLLTAKTYSILISGW 229
R+ + G+ P + LL K + +A + D+ + + + +Y++L++G+
Sbjct: 201 RLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLV----SYNVLLTGF 256
Query: 230 GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDA 289
K G + A LF+ + +G ++++YN L LC G +EA ++ +M P
Sbjct: 257 CKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSV 316
Query: 290 FTYSIFIHTYCDANDIHSAFRVLDKMRRCN--LLPNVFTYNCIIKRLCKNDKVEEAYELL 347
TY+I I++ A +VL +M + N +YN +I RLCK KV+ + L
Sbjct: 317 VTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCL 376
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDH-CEVSRALRLMSRME-------------------- 386
DEMI R KP+ +YNAI C+H +V A ++ +
Sbjct: 377 DEMIYRRCKPNEGTYNAI-GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCR 435
Query: 387 KDNCF---------------PDRHTYNMVLKLLIRIGRFDKATEV 416
K N F PD HTY+ +++ L G F A EV
Sbjct: 436 KGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEV 480
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 16/276 (5%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF---- 208
+ + + + D A+ F + G K + +++LL LC ++A
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 209 --DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAML--DQGCPVDLLAYNNFLDAL 264
D+A S TY+ILI+ G + +A ++ + M + V +YN + L
Sbjct: 309 GGDRAPS-----VVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARL 363
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAND-IHSAFRVLDKMRRCNLLPN 323
CK G VD +M+ +R +P+ TY+ I + C+ N + AF ++ +
Sbjct: 364 CKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCT 422
Query: 324 VFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMS 383
Y +I LC+ A++LL EM G PD +Y+A+ C + A+ ++S
Sbjct: 423 HDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLS 482
Query: 384 RMEK-DNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
ME+ +NC P +N ++ L +I R D A EV+E
Sbjct: 483 IMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFE 518
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 186 HDF-DMLLYFLCKRKHVKQA-QQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQ 243
HDF ++ LC++ + A Q ++ + F A TYS LI G G A E+
Sbjct: 423 HDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLS 482
Query: 244 AMLD-QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA 302
M + + C + +N + LCK D A +F M+ K+ P+ TY+I +
Sbjct: 483 IMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHE 542
Query: 303 NDIHSAFRVLDKMR 316
+++ A VLD++R
Sbjct: 543 DELELAKEVLDELR 556
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 141/313 (45%), Gaps = 11/313 (3%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDI--FWFIFKAYSRANLP 166
G V S+++L+ + + W + MRE I DI F + + +
Sbjct: 534 GMPWDVVSYNVLISGMLKFGKVGADWAY-KGMREKG---IEPDIATFNIMMNSQRKQGDS 589
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA---KSHFLLTAKTYS 223
+G ++ + +M GIKP++ ++++ LC+ +++A +Q + H LT TY
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLT--TYR 647
Query: 224 ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
I + K + + + +L G + YN + LCK G +A + DM ++
Sbjct: 648 IFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEAR 707
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
PD T++ +H Y + + A M + PNV TYN II+ L ++E
Sbjct: 708 GFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEV 767
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
+ L EM RG++PD ++YNA+ + + ++ + M D P TYN+++
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISE 827
Query: 404 LIRIGRFDKATEV 416
+G+ +A E+
Sbjct: 828 FANVGKMLQAREL 840
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGD 234
M+E + P + L+ L K + A + Q + + Y++L+ G K GD
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
+A + F+ +L+ +++ Y +D LCK G + A I ML K V P+ TYS
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I+ Y + A +L KM N++PN FTY +I L K K E A EL EM L G
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
V+ + + +A+ H + L+ M D+ Y ++ + + G
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 131/316 (41%), Gaps = 41/316 (12%)
Query: 136 FLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFL 195
F + + I++ + + L D A + M + GI P ++ L+
Sbjct: 147 FAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGF 206
Query: 196 CKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLL 255
CK + +A+ D+ L+T ++IL+S + + E ++ M+ G D++
Sbjct: 207 CKVGNFVRAKALVDEISELNLIT---HTILLSSYYNLH---AIEEAYRDMVMSGFDPDVV 260
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAN------------ 303
+++ ++ LCKGG V E + +M V P+ TY+ + + AN
Sbjct: 261 TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQM 320
Query: 304 -----------------------DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
D+ A + + N +PNV TY ++ LCK +
Sbjct: 321 VVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDL 380
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
A ++ +M+ + V P+ +Y+++ + + A+ L+ +ME N P+ TY V
Sbjct: 381 SSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTV 440
Query: 401 LKLLIRIGRFDKATEV 416
+ L + G+ + A E+
Sbjct: 441 IDGLFKAGKEEMAIEL 456
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 1/196 (0%)
Query: 179 FGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGK 237
+GIK + ++ L+ LCK K+A D F+ T++ L+ G+ K
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK 731
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A + M++ G ++ YN + L G + E +M S+ + PD FTY+ I
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 791
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
++ + + +M L+P TYN +I K+ +A ELL EM RGV P
Sbjct: 792 GQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP 851
Query: 358 DTWSYNAIQAHHCDHC 373
+T +Y + + C C
Sbjct: 852 NTSTYCTMISGLCKLC 867
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 141/344 (40%), Gaps = 46/344 (13%)
Query: 113 SVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRS 172
+V ++ LV+ L + +T+M E S N + + Y + + + A+
Sbjct: 363 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIP-NVVTYSSMINGYVKKGMLEEAVSL 421
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK------SHFLLTAKTYSILI 226
+M++ + P + ++ L K + A + + + ++++L A L+
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA-----LV 476
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG----------CVDE---- 272
+ +IG + + L + M+ +G +D + Y + +D KGG + E
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMP 536
Query: 273 ----ATNI----------------FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
+ N+ + M K +EPD T++I +++ D ++
Sbjct: 537 WDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 596
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
DKM+ C + P++ + N ++ LC+N K+EEA +L++M+L + P+ +Y H
Sbjct: 597 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKH 656
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ + R YN ++ L ++G KA V
Sbjct: 657 KRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMV 700
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 5/155 (3%)
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV-DEATNIFHDMLSKRVEPDAFTYSI 294
G AR L AM G D +N+ + G V D+ + I+ M++ V PD F ++
Sbjct: 76 GAARTL-SAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNV 134
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
IH++C + A +L R + + TYN +I LC++ +EAY+ L EM+ G
Sbjct: 135 LIHSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMG 191
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN 389
+ PDT SYN + C RA L+ + + N
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELN 226
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 115/268 (42%), Gaps = 12/268 (4%)
Query: 152 IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA 211
+F +F+ Y GA R+ M FG+ P ++ L++ V
Sbjct: 60 LFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSK 119
Query: 212 KSHFLLTAKTYS--ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGC 269
++ ++ +LI + K+G A L + ++ +D + YN + LC+ G
Sbjct: 120 MIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGLCEHGL 176
Query: 270 VDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNC 329
DEA +M+ + PD +Y+ I +C + A ++D++ NL+ T+
Sbjct: 177 ADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI----THTI 232
Query: 330 IIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN 389
++ +EEAY +M++ G PD ++++I C +V L+ ME+ +
Sbjct: 233 LLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMS 289
Query: 390 CFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+P+ TY ++ L + + A ++
Sbjct: 290 VYPNHVTYTTLVDSLFKANIYRHALALY 317
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 112/277 (40%), Gaps = 35/277 (12%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDS 235
M E G+ + +++L+ + K V + + T++I+++ K GDS
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIF 295
+L+ M G L++ N + LC+ G ++EA +I + M+ + P+ TY IF
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
+ T + F+ + + + + YN +I LCK ++A ++ +M RG
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 356 KPDTWSYNAIQAHHCDHCEVSRAL-----------------------------------R 380
PDT ++N++ + V +AL +
Sbjct: 710 IPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDK 769
Query: 381 LMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+S M+ PD TYN ++ +IG + ++
Sbjct: 770 WLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIY 806
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 6/243 (2%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKH----VKQAQQFFDQAKSHFLLTAKTYSILISGWG 230
+M+ G+K ++ L +LCK + ++ ++ D F TY LI +
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDM--HGFSPDIVTYHTLIKAYL 427
Query: 231 KIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAF 290
K+GD A E+ + M +G ++ + N LDALCK +DEA N+ + + D
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
TY I + + A + D+M++ + P V T+N +I LC + K E A E DE+
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRF 410
G+ PD ++N+I +C V +A + K + PD +T N++L L + G
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 411 DKA 413
+KA
Sbjct: 608 EKA 610
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 131/269 (48%), Gaps = 7/269 (2%)
Query: 152 IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKH---VKQAQQFF 208
+F AY P A++ F +M +KP + + LL L + + A++ F
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192
Query: 209 DQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCK 266
D K L +T+++L++G+ G A + + M+ + D + YN L A+ K
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
G + + + DM + P+ TY+ ++ YC + AF++++ M++ N+LP++ T
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVS-RALRLMSRM 385
YN +I LC + E EL+D M ++PD +YN + C +S A +LM +M
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL-IDGCFELGLSLEARKLMEQM 371
Query: 386 EKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
E D ++ T+N+ LK L + + + T
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVT 400
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 2/264 (0%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSH 214
+ KAY + GA+ M + GIK + +L LCK + + +A + A K
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
F++ TY LI G+ + KA E++ M + +N+ + LC G + A
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
F ++ + PD T++ I YC + AF ++ + + P+ +T N ++ L
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
CK E+A + +I + DT +YN + + C ++ A L+S ME+ PDR
Sbjct: 602 CKEGMTEKALNFFNTLI-EEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 395 HTYNMVLKLLIRIGRFDKATEVWE 418
TYN + LL+ G+ + E+ +
Sbjct: 661 FTYNSFISLLMEDGKLSETDELLK 684
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 8/315 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEM-RESSCCEINSD--IFWFIFKAYSRANL 165
G +V++F++LV G C + L D L + R S ++N D + I KA S+
Sbjct: 199 GVSLNVQTFNVLVN--GYCLE-GKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGR 255
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSI 224
L M + G+ P ++ L+Y CK +K+A Q + K ++ L TY+I
Sbjct: 256 LSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNI 315
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI+G G + EL AM D++ YN +D + G EA + M +
Sbjct: 316 LINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG 375
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC-NLLPNVFTYNCIIKRLCKNDKVEEA 343
V+ + T++I + C + R + ++ P++ TY+ +IK K + A
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGA 435
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
E++ EM +G+K +T + N I C ++ A L++ K D TY ++
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495
Query: 404 LIRIGRFDKATEVWE 418
R + +KA E+W+
Sbjct: 496 FFREEKVEKALEMWD 510
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 1/204 (0%)
Query: 216 LLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
LLT T I + + ARE+F M+ G +++ +N ++ C G +++A
Sbjct: 166 LLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG 225
Query: 276 IFHDMLSK-RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
+ M+S+ +V PD TY+ + + +L M++ L+PN TYN ++
Sbjct: 226 MLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGY 285
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
CK ++EA+++++ M V PD +YN + C+ + L LM M+ PD
Sbjct: 286 CKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDV 345
Query: 395 HTYNMVLKLLIRIGRFDKATEVWE 418
TYN ++ +G +A ++ E
Sbjct: 346 VTYNTLIDGCFELGLSLEARKLME 369
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAKTYSILIS 227
A+ F + E G+ P F+ ++ CK V++A +F++++ H F T +IL++
Sbjct: 540 AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G K G + KA F ++++ VD + YN + A CK + EA ++ +M K +EP
Sbjct: 600 GLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEP 658
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDK 314
D FTY+ FI + + +L K
Sbjct: 659 DRFTYNSFISLLMEDGKLSETDELLKK 685
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 145/339 (42%), Gaps = 40/339 (11%)
Query: 117 FHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRM 176
I V ILG Q+++ L ++ ++ + I AYSR + AI F RM
Sbjct: 178 IEIFVRILGRESQYSVAAKLLDKIPLQEYL-LDVRAYTTILHAYSRTGKYEKAIDLFERM 236
Query: 177 DEFGIKPTIHDFDMLL----------------------------YFLC--------KRKH 200
E G PT+ ++++L F C +
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGL 296
Query: 201 VKQAQQFFDQAKS-HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNN 259
+++A++FF + KS + TY+ L+ +GK G +A + + M + CP D + YN
Sbjct: 297 LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNE 356
Query: 260 FLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCN 319
+ A + G EA + M K V P+A TY+ I Y A A ++ M+
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 320 LLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRAL 379
+PN TYN ++ L K + E ++L +M G P+ ++N + A C + + + +
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA-LCGNKGMDKFV 475
Query: 380 RLMSRMEKDNCF-PDRHTYNMVLKLLIRIGRFDKATEVW 417
+ R K F PDR T+N ++ R G A++++
Sbjct: 476 NRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 125/314 (39%), Gaps = 40/314 (12%)
Query: 141 RESSCC--EINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKR 198
RE C E + D F + AY R A + + M G + ++ LL L ++
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 199 KHVKQAQQFFDQAKSH-FLLTAKTYSILISGWGKIGD----------------------- 234
+ + KS F T +YS+++ + K G+
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLL 599
Query: 235 -------------SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML 281
+G R F G D++ +N+ L + D+A I +
Sbjct: 600 RTLLLANFKCRALAGSERA-FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 282 SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVE 341
+ PD TY+ + Y + A +L + + L P++ +YN +IK C+ ++
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 342 EAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
EA +L EM RG++P ++YN + + + ++ M K++C P+ T+ MV+
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVV 778
Query: 402 KLLIRIGRFDKATE 415
R G++ +A +
Sbjct: 779 DGYCRAGKYSEAMD 792
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 129/311 (41%), Gaps = 7/311 (2%)
Query: 86 VLKRCKNLGF--SAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRES 143
VL C G A FF KS G++ +++ L+++ G + L EM E+
Sbjct: 287 VLSACAREGLLREAKEFFAELKSC-GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEEN 345
Query: 144 SCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQ 203
SC +S + + AY RA A M + G+ P + ++ K +
Sbjct: 346 SC-PADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 204 AQQ-FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLD 262
A + F+ ++ + TY+ ++S GK S + ++ M GC + +N L
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML- 463
Query: 263 ALCKGGCVDEATN-IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLL 321
ALC +D+ N +F +M S EPD T++ I Y A ++ +M R
Sbjct: 464 ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN 523
Query: 322 PNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRL 381
V TYN ++ L + ++ +M +G KP SY+ + + R+
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 382 MSRMEKDNCFP 392
+R+++ FP
Sbjct: 584 ENRIKEGQIFP 594
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 131/297 (44%), Gaps = 3/297 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
GF V +++ L+ L + + +++M+ S + + + + Y++ G
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMK-SKGFKPTETSYSLMLQCYAKGGNYLG 579
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAKTYSILIS 227
R R+ E I P+ LL K + + +++ F K H + ++ ++S
Sbjct: 580 IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLS 639
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+ + +A + +++ + G DL+ YN+ +D + G +A I + +++P
Sbjct: 640 IFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP 699
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
D +Y+ I +C + A R+L +M + P +FTYN + E +++
Sbjct: 700 DLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVI 759
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK-DNCFPDRHTYNMVLKL 403
+ M +P+ ++ + +C + S A+ +S+++ D CF D+ + L++
Sbjct: 760 ECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALRV 816
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 252 VDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD-ANDIHSAFR 310
+D+ AY L A + G ++A ++F M P TY++ + +
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
VLD+MR L + FT + ++ + + EA E E+ G +P T +YNA+
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ AL ++ ME+++C D TYN ++ +R G +A V E
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 147/344 (42%), Gaps = 50/344 (14%)
Query: 113 SVESFHILVEILGS------CKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
++ + +IL+ G+ C + WD ++NS + + +AY R+
Sbjct: 170 NISTVNILIGFFGNTEDLQMCLRLVKKWDL----------KMNSFTYKCLLQAYLRSRDY 219
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILI 226
A + + G K I ++MLL L K + K Q F D K H TY+I+I
Sbjct: 220 SKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDE--KACQVFEDMKKRHCRRDEYTYTIMI 277
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
G+IG +A LF M+ +G ++++ YN + L KG VD+A +F M+
Sbjct: 278 RTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCR 337
Query: 287 PDAFTYSIFIH-------------------TYCDANDIHSAFRVLDKMRRCNLLPNVF-- 325
P+ +TYS+ ++ Y R L K+ + +F
Sbjct: 338 PNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCD 397
Query: 326 -----------TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
+Y +++ LC K EA E+L ++ +GV DT YN + + +
Sbjct: 398 MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQ 457
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+S L +M+KD PD TYN+++ R+G D+A ++E
Sbjct: 458 ISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFE 501
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 140/330 (42%), Gaps = 43/330 (13%)
Query: 124 LGSCKQFAILW-DFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIK 182
+G C + L+ + +TE + N+ + + ++ + D AI+ F RM E G +
Sbjct: 283 IGKCDEAVGLFNEMITEGLTLNVVGYNT-----LMQVLAKGKMVDKAIQVFSRMVETGCR 337
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELF 242
P + + +LL L + + + +K + +T YS L+ K+G +A LF
Sbjct: 338 PNEYTYSLLLNLLVAEGQLVRLDGVVEISKRY--MTQGIYSYLVRTLSKLGHVSEAHRLF 395
Query: 243 ---------------QAMLD--------------------QGCPVDLLAYNNFLDALCKG 267
+ML+ +G D + YN AL K
Sbjct: 396 CDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKL 455
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
+ ++F M PD FTY+I I ++ ++ A + +++ R + P++ +Y
Sbjct: 456 KQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISY 515
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
N +I L KN V+EA+ EM +G+ PD +Y+ + V A L M
Sbjct: 516 NSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLV 575
Query: 388 DNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
C P+ TYN++L L + GR +A +++
Sbjct: 576 KGCQPNIVTYNILLDCLEKNGRTAEAVDLY 605
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 1/257 (0%)
Query: 148 INSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF 207
+ I+ ++ + S+ A R F M F +K + +L LC +A +
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 208 FDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
+ ++T Y+ + S GK+ +LF+ M G D+ YN + + +
Sbjct: 430 LSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGR 489
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
G VDEA NIF ++ +PD +Y+ I+ D+ A +M+ L P+V T
Sbjct: 490 VGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVT 549
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
Y+ +++ K ++VE AY L +EM+++G +P+ +YN + + + A+ L S+M+
Sbjct: 550 YSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK 609
Query: 387 KDNCFPDRHTYNMVLKL 403
+ PD TY ++ +L
Sbjct: 610 QQGLTPDSITYTVLERL 626
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 10/272 (3%)
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
C + + + + R D A+ F M G+ + ++ L+ L K K V +A
Sbjct: 266 CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 206 QFFDQ-AKSHFLLTAKTYSILIS---GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFL 261
Q F + ++ TYS+L++ G++ E+ + + QG Y+ +
Sbjct: 326 QVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGI------YSYLV 379
Query: 262 DALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLL 321
L K G V EA +F DM S V+ + +Y + + C A A +L K+ ++
Sbjct: 380 RTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVV 439
Query: 322 PNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRL 381
+ YN + L K ++ ++L ++M G PD ++YN + A EV A+ +
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINI 499
Query: 382 MSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+E+ +C PD +YN ++ L + G D+A
Sbjct: 500 FEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 147/319 (46%), Gaps = 11/319 (3%)
Query: 100 FFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKA 159
+FL GF+ + +V L + + D + EM C + + +
Sbjct: 404 WFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNG 463
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-T 218
+ R D A + M G KP + LL +C+ +A++ + ++ H+
Sbjct: 464 FCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPN 523
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQG---CPVDLLAYNNFLDALCKGGCVDEATN 275
+ TYS+++ G + G +A ++ + M+ +G PV++ N L +LC+ G EA
Sbjct: 524 SITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI---NLLLQSLCRDGRTHEARK 580
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
+ L+K + ++ IH +C +++ +A VLD M N +VFTY ++ L
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 336 KNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM-EKDNCFPDR 394
K ++ EA EL+ +M+ +G+ P +Y + +C +V + ++ +M + C R
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC---R 697
Query: 395 HTYNMVLKLLIRIGRFDKA 413
YN V++ L +G+ ++A
Sbjct: 698 TIYNQVIEKLCVLGKLEEA 716
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 163/373 (43%), Gaps = 9/373 (2%)
Query: 49 LVSEISRVVS--DHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKS 106
LV E+ R++ +P H E + + V VL R ++ A +FF WA
Sbjct: 143 LVREVGRLIGLRSSWNPKH--EGQMRNLLRSLKPSQVCAVL-RSQDDERVALKFFYWADR 199
Query: 107 IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
++H ++ ++E+L K L M+ + F + +YSRA
Sbjct: 200 QWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYR-TPEAFSRVMVSYSRAGQL 258
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSIL 225
A++ M G++P + + + + +++A +F ++ + ++ TY+ +
Sbjct: 259 RDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCM 318
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR- 284
I G+ + +A EL + M +GC D ++Y + LCK + E ++ M +
Sbjct: 319 IRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHG 378
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+ PD TY+ IH + A L + + Y+ I+ LCK ++ EA
Sbjct: 379 LVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438
Query: 345 ELLDEMILRG-VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
+L++EM+ +G PD +Y A+ C EV +A +L+ M P+ +Y +L
Sbjct: 439 DLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNG 498
Query: 404 LIRIGRFDKATEV 416
+ R G+ +A E+
Sbjct: 499 MCRTGKSLEAREM 511
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 122/270 (45%), Gaps = 19/270 (7%)
Query: 151 DIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ 210
+ WF+ A + R+D+ G +H LCK + +A+ ++
Sbjct: 401 EALWFLKDAQEKG----------FRIDKLGYSAIVH-------ALCKEGRMSEAKDLINE 443
Query: 211 --AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
+K H TY+ +++G+ ++G+ KA++L Q M G + ++Y L+ +C+ G
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYN 328
EA + + P++ TYS+ +H + A V+ +M P N
Sbjct: 504 KSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEIN 563
Query: 329 CIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKD 388
+++ LC++ + EA + ++E + +G + ++ + C + E+ AL ++ M
Sbjct: 564 LLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLI 623
Query: 389 NCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
N D TY ++ L + GR +ATE+ +
Sbjct: 624 NKHADVFTYTTLVDTLGKKGRIAEATELMK 653
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 131/323 (40%), Gaps = 6/323 (1%)
Query: 101 FLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAY 160
FL + G +V +++ ++ + + L +M C + + ++ Y
Sbjct: 299 FLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGC--LPDKVSYYTIMGY 356
Query: 161 SRANLPDGAIRSFLR--MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLL 217
+R ++ E G+ P ++ L++ L K H +A F D + F +
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQG-CPVDLLAYNNFLDALCKGGCVDEATNI 276
YS ++ K G +A++L ML +G CP D++ Y ++ C+ G VD+A +
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
M + +P+ +Y+ ++ C A +++ PN TY+ I+ L +
Sbjct: 477 LQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 536
Query: 337 NDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
K+ EA +++ EM+L+G P N + C A + M C +
Sbjct: 537 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 397 YNMVLKLLIRIGRFDKATEVWEN 419
+ V+ + D A V ++
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDD 619
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 136/327 (41%), Gaps = 18/327 (5%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G V ++ I+V+ + EMRE C N + + AY +A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP-NVVTYTALIHAYLKAKKVSY 571
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ---------AKSHFLL-- 217
A F M G P I + L+ CK V++A Q F++ +F
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 218 ------TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
TY L+ G+ K +AR+L AM +GC + + Y+ +D LCK G +D
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
EA + +M +TYS I Y A +VL KM + PNV Y +I
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
LCK K +EAY+L+ M +G +P+ +Y A+ ++ L L+ RM
Sbjct: 752 DGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA 811
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWE 418
P+ TY +++ + G D A + E
Sbjct: 812 PNYVTYRVLIDHCCKNGALDVAHNLLE 838
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 3/240 (1%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAKTYSILISGWGKIGDSGKA 238
G +P +D L+ LCK + +AQ+ + H F T TYS LI + K+ A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
++ ML+ C +++ Y +D LCK G DEA + M K +P+ TY+ I
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
+ I + +L++M + PN TY +I CKN ++ A+ LL+EM
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
T Y + + E +L L+ + +D+ P Y +++ LI+ R + A + E
Sbjct: 849 TAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 138/306 (45%), Gaps = 12/306 (3%)
Query: 123 ILGSCKQ--FAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEF- 179
I G C+ F DFL MR +SC + ++ L G + L M
Sbjct: 309 ISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL--GRCKRVLNMMMME 366
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGK- 237
G P+ F+ L++ C A + + K + Y+ILI DS
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 238 -----ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
A + + ML G ++ + ++F LC G ++A ++ +M+ + PD TY
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
S ++ C+A+ + AF + ++M+R L+ +V+TY ++ CK +E+A + +EM
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
G P+ +Y A+ + +VS A L M + C P+ TY+ ++ + G+ +K
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 413 ATEVWE 418
A +++E
Sbjct: 607 ACQIFE 612
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 14/281 (4%)
Query: 124 LGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKP 183
LG CK+ + M C + IF + AY + A + +M + G P
Sbjct: 353 LGRCKR-------VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP 405
Query: 184 TIHDFDMLLYFLCKRKHVKQAQ--QFFDQAKSHFLLTAKTYS-ILISGWGK----IGDSG 236
+++L+ +C K ++A S L + I +S + + G
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE 465
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
KA + + M+ QG D Y+ L+ LC ++ A +F +M + D +TY+I +
Sbjct: 466 KAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
++C A I A + ++MR PNV TY +I K KV A EL + M+ G
Sbjct: 526 DSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
P+ +Y+A+ HC +V +A ++ RM PD Y
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/426 (19%), Positives = 161/426 (37%), Gaps = 83/426 (19%)
Query: 71 LNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQF 130
L QF ++S LV +VL+ + FF+WA G++H+ ++ LV+++
Sbjct: 123 LRQFREKLSESLVIEVLRLIARPS-AVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDE 181
Query: 131 AILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDM 190
+ +FL ++R+ E+ + + + + R A+ R+ +F +P+ ++
Sbjct: 182 KVPEEFLQQIRDDDK-EVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNC 240
Query: 191 LLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQG 249
L+ K + A + + ++ + T K+G K RE + +
Sbjct: 241 LIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG---KWREALTLVETEN 297
Query: 250 CPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIF-------------- 295
D + Y + LC+ +EA + + M + P+ TYS
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 296 ---------------------IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR- 333
+H YC + D A+++L KM +C +P YN +I
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 334 ----------------------------------------LCKNDKVEEAYELLDEMILR 353
LC K E+A+ ++ EMI +
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
G PDT +Y+ + + C+ ++ A L M++ D +TY +++ + G ++A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 414 TEVWEN 419
+ W N
Sbjct: 538 RK-WFN 542
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 131/331 (39%), Gaps = 41/331 (12%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
CK+ R L A S+ G + + + L++ L + + TEM E
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG---FP 706
Query: 150 SDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF 207
+ ++ + + Y + D A + +M E P + + ++ LCK +A +
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 208 FDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
+ TY+ +I G+G IG EL + M +G + + Y +D CK
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826
Query: 267 GGCVDEATNIFHDM-----------LSKRVE----------------------PDAFTYS 293
G +D A N+ +M K +E P Y
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYR 886
Query: 294 IFIHTYCDANDIHSAFRVLDKMR--RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
+ I A + A R+L+++ L+ TYN +I+ LC +KVE A++L EM
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLM 382
+GV P+ S+ ++ + ++S AL L+
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 9/217 (4%)
Query: 137 LTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLC 196
L +M E C+ N + + + + + RM G+ P + +L+ C
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 197 KRKHVKQAQQFFDQAK-SHFLLTAKTYSILISGWGK--IGDSGKARELFQAMLDQGCPVD 253
K + A ++ K +H+ Y +I G+ K I G E+ Q D P
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQ---DDTAPF- 881
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDM--LSKRVEPDAFTYSIFIHTYCDANDIHSAFRV 311
L Y +D L K ++ A + ++ S + + TY+ I + C AN + +AF++
Sbjct: 882 LSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQL 941
Query: 312 LDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
+M + ++P + ++ +IK L +N K+ EA LLD
Sbjct: 942 FSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 148/301 (49%), Gaps = 7/301 (2%)
Query: 123 ILGSC--KQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGA--IRSFLRMDE 178
++G C ++ + ++ + E +S+ ++++ ++ + + +A + A ++S+ M +
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSY--MSK 248
Query: 179 FGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGK 237
G +P + +++LL + +K+A+ + +S L A +Y+ L+ ++ K
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDK 308
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
++ D+++Y+ ++ C+ +A +F +M K + + TY+ I
Sbjct: 309 CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+ + A ++LD+M L P+ Y I+ LCK+ V++AY + ++MI + P
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP 428
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
D SYN++ + C V+ A++L M+ C PD T+ ++ LIR + A +VW
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
Query: 418 E 418
+
Sbjct: 489 D 489
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Query: 185 IHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAKTYSILISGWGKIGDSGKARELFQ 243
+ + L+ C+ + ++A + F++ + ++ TY+ LI + + G+S A++L
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 244 AMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAN 303
M + G D + Y LD LCK G VD+A +F+DM+ + PDA +Y+ I C +
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 304 DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
+ A ++ + M+ P+ T+ II L + K+ AY++ D+M+ +G D
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 2/242 (0%)
Query: 162 RANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQ-FFDQAKSHFLLTAK 220
++ + D A++ F M + D++ + L + + A+ ++D F L
Sbjct: 21 KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPF 80
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TYS ISG K+ L M G D+ A+N +LD LC+ V A F M
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ + EPD +Y+I I+ A + A + + M R + P+ ++ LC KV
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 341 EEAYELLDEMILRG-VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
+ AYE++ E I VK T YNA+ + C + +A L S M K C PD TYN+
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 400 VL 401
+L
Sbjct: 261 LL 262
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%)
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
LAY + + L K G +D A +F +M +F Y+ FI + A +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
M+ FTY+ I LCK K + LL +M G PD W++N C +
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
V A++ M + PD +Y +++ L R G+ A E+W
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIW 172
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 78/196 (39%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
Y I+ K G A ++F M V YN F+ L + + A I+ DM
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
FTYS FI C +L M +P+++ +N + LC+ +KV
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
A + M+ RG +PD SY + +V+ A+ + + M + PD +
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 401 LKLLIRIGRFDKATEV 416
+ L + D A E+
Sbjct: 191 VVGLCHARKVDLAYEM 206
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 2/188 (1%)
Query: 114 VESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSF 173
V S+ L+E + EMR+ +N + + KA+ R A +
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMV-MNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 174 LRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKI 232
+M E G+ P + +L LCK +V +A F+ H + A +Y+ LISG +
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
G +A +LF+ M + C D L + + L +G + A ++ M+ K D
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 293 SIFIHTYC 300
I C
Sbjct: 504 DTLIKASC 511
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 1/245 (0%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIG 233
+M++ GIK + +L+ LCK + V A + + K + TYS LI+G K G
Sbjct: 38 QMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSG 97
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
A M + +++ ++ +DA K G + + +++ M+ ++P+ FTYS
Sbjct: 98 RLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYS 157
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I+ C N + A ++LD M PNV TY+ + K+ +V++ +LLD+M R
Sbjct: 158 SLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 217
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
GV +T S N + + ++ AL + M + P+ +YN+VL L G +KA
Sbjct: 218 GVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKA 277
Query: 414 TEVWE 418
+E
Sbjct: 278 LSRFE 282
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 116/246 (47%), Gaps = 1/246 (0%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGK 231
L+M + GI+P I L+ C +K A Q K +ILI K
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
A E+ + M D+G +++ Y++ + LCK G + +A H+M SK++ P+ T
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
+S I Y + V M + ++ PNVFTY+ +I LC +++V+EA ++LD MI
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
+G P+ +Y+ + V ++L+ M + + + N ++K + G+ D
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 412 KATEVW 417
A V+
Sbjct: 241 LALGVF 246
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 1/234 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILIS 227
A+ RM + GI P + + L+ LCK + A++ + S + T+S LI
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+ K G K +++ M+ ++ Y++ + LC VDEA + M+SK P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ TYS + + ++ + ++LD M + + N + N +IK + K++ A +
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
M G+ P+ SYN + A + EV +AL M+K D TY +++
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 21/287 (7%)
Query: 85 QVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESS 144
+VLKR K+ G S + V ++ L I G CK L D + E
Sbjct: 69 EVLKRMKDRGISPN---------------VVTYSSL--ITGLCKS-GRLADAERRLHEMD 110
Query: 145 CCEINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVK 202
+IN ++ F + AY++ + M + I P + + L+Y LC V
Sbjct: 111 SKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVD 170
Query: 203 QAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFL 261
+A + D S TYS L +G+ K +L M +G + ++ N +
Sbjct: 171 EAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI 230
Query: 262 DALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLL 321
+ G +D A +F M S + P+ +Y+I + ++ A + M++
Sbjct: 231 KGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRND 290
Query: 322 PNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAH 368
++ TY +I +CK V+EAY+L ++ + V+PD +Y + A
Sbjct: 291 LDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAE 337
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%)
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
M+ +EPD T S ++ +C +N I A V +M + + +V +I LCKN
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
V A E+L M RG+ P+ +Y+++ C ++ A R + M+ P+ T++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 400 VLKLLIRIGRFDKATEVWE 418
++ + G+ K V++
Sbjct: 124 LIDAYAKRGKLSKVDSVYK 142
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 152/335 (45%), Gaps = 13/335 (3%)
Query: 59 DHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFH 118
D+R L+ S+ + LV VL K L A +FF W + +H ++
Sbjct: 96 DNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEH-ALQFFRWTERSGLIRHDRDTHM 154
Query: 119 ILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE 178
++++LG + L +M E + D+F + ++Y +A + +++ F +M +
Sbjct: 155 KMIKMLGEVSKLNHARCILLDMPEKGVP-WDEDMFVVLIESYGKAGIVQESVKIFQKMKD 213
Query: 179 FGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGK 237
G++ TI ++ L + +R A+++F++ S + T TY++++ G+
Sbjct: 214 LGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLET 273
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A F+ M +G D +N ++ C+ +DEA +F +M ++ P +Y+ I
Sbjct: 274 ALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIK 333
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
Y + + R+ ++MR + PN TY+ ++ LC K+ EA +L M+ + + P
Sbjct: 334 GYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Query: 358 DTWSYNAI-------QAHHCDHCEVSRALRLMSRM 385
N+I Q+ D + L+ M+ +
Sbjct: 394 KD---NSIFLKLLVSQSKAGDMAAATEVLKAMATL 425
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%)
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML 281
+ +LI +GK G ++ ++FQ M D G + +YN+ + + G A F+ M+
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 282 SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVE 341
S+ VEP TY++ + + + + +A R + M+ + P+ T+N +I C+ K++
Sbjct: 248 SEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 342 EAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
EA +L EM + P SY + + V LR+ M P+ TY+ +L
Sbjct: 308 EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
Query: 402 KLLIRIGRFDKATEVWEN 419
L G+ +A + +N
Sbjct: 368 PGLCDAGKMVEAKNILKN 385
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/389 (19%), Positives = 145/389 (37%), Gaps = 84/389 (21%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + +++S++ L +++ ++ + + +M S E + + + + +
Sbjct: 215 GVERTIKSYNSLFKVILRRGRYMMAKRYFNKM-VSEGVEPTRHTYNLMLWGFFLSLRLET 273
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILIS 227
A+R F M GI P F+ ++ C+ K + +A++ F + K + + + +Y+ +I
Sbjct: 274 ALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIK 333
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
G+ + +F+ M G + Y+ L LC G + EA NI +M++K + P
Sbjct: 334 GYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Query: 288 ------------------------------------DAFTYSIFIHTYCDANDIHSAFRV 311
+A Y + I C A+ + A ++
Sbjct: 394 KDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKL 453
Query: 312 LDKMRRCNLL----------PNVFTYNCIIKRLCKNDKVEEA------------------ 343
LD + ++ P+ YN II+ LC N + +A
Sbjct: 454 LDTLIEKEIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDAL 511
Query: 344 ----------------YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
YE+L M RGV ++ +Y + + E A + M +
Sbjct: 512 NNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVE 571
Query: 388 DNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
D PD + V++ L GR A+ V
Sbjct: 572 DGHVPDSSLFRSVIESLFEDGRVQTASRV 600
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 98/234 (41%), Gaps = 2/234 (0%)
Query: 187 DFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT--AKTYSILISGWGKIGDSGKARELFQA 244
D ++ L K ++ A QFF + L+ T+ +I G++ AR +
Sbjct: 116 DHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLD 175
Query: 245 MLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAND 304
M ++G P D + +++ K G V E+ IF M VE +Y+
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 305 IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNA 364
A R +KM + P TYN ++ + ++E A ++M RG+ PD ++N
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 365 IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ C ++ A +L M+ + P +Y ++K + + R D ++E
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFE 349
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 13/260 (5%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSIL 225
D A+ F +M G+ P + + ++++ LCK A +D+ L ++T+ L
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
+ G + G +AR L +++ G +D++ YN +D K GC++EA +F ++ +
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P T++ I+ YC +I A ++LD ++ L P+V +Y ++ + E
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 346 LLDEMILRGVKPDTWSYNAI--------QAHHCDHCEVSRAL----RLMSRMEKDNCFPD 393
L EM G+ P +Y+ I + +C+H R + + ME + PD
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 394 RHTYNMVLKLLIRIGRFDKA 413
+ TYN +++ L R+ A
Sbjct: 620 QITYNTIIQYLCRVKHLSGA 639
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 137/298 (45%), Gaps = 5/298 (1%)
Query: 125 GSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIK 182
G C+Q L D + +R S +I + F I Y + D A F + + G+
Sbjct: 196 GLCRQ-QKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLV 254
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKAREL 241
P+++ ++L+ LC + +A + H + + TY+IL G+ +G A E+
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT-YSIFIHTYC 300
+ MLD+G D++ Y L C+ G +D + DMLS+ E ++ S+ + C
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
I A + ++M+ L P++ Y+ +I LCK K + A L DEM + + P++
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
++ A+ C + A L+ + D YN+V+ + G ++A E+++
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 127/290 (43%), Gaps = 9/290 (3%)
Query: 133 LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEF-GIKPTIHDFDML 191
+WD E+++ N + + R + A+ FLR E+ I P++ F+ +
Sbjct: 175 MWDVYKEIKDK-----NEHTYSTVVDGLCRQQKLEDAVL-FLRTSEWKDIGPSVVSFNSI 228
Query: 192 LYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGC 250
+ CK V A+ FF K + + +++ILI+G +G +A EL M G
Sbjct: 229 MSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 288
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
D + YN G + A + DML K + PD TY+I + C +I
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 311 VL-DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHH 369
+L D + R L ++ + ++ LCK +++EA L ++M G+ PD +Y+ +
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 370 CDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
C + AL L M P+ T+ +L L + G +A + ++
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 129/295 (43%), Gaps = 3/295 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G SV S +IL+ L A + ++M + E +S + + K + + G
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV-EPDSVTYNILAKGFHLLGMISG 310
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKT-YSILI 226
A M + G+ P + + +LL C+ ++ D F L + S+++
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
SG K G +A LF M G DL+AY+ + LCK G D A ++ +M KR+
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P++ T+ + C + A +LD + ++ YN +I K+ +EEA EL
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
+I G+ P ++N++ +C ++ A +++ ++ P +Y ++
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 190 MLLYFLCKRKHVKQAQQFFDQAKSHFL---LTAKTYSILISGWGKIGDSGKARELFQAML 246
++L LCK + +A F+Q K+ L L A YSI+I G K+G A L+ M
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA--YSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
D+ + + L LC+ G + EA ++ ++S D Y+I I Y + I
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
A + + + P+V T+N +I CK + EA ++LD + L G+ P SY +
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
+ + L M+ + P TY+++ K L R
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 124/282 (43%), Gaps = 25/282 (8%)
Query: 123 ILGSCKQFAIL-WDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGI 181
+LG C++ +L L + SS ++ ++ + Y+++ + A+ F + E GI
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 182 KPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARE 240
P++ F+ L+Y CK +++ +A++ D K + L + +Y+ L+ + G++ E
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
L + M +G P + Y+ LC+G + ++ + + ++ +
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG------------ 607
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
L M + P+ TYN II+ LC+ + A+ L+ M R + +
Sbjct: 608 -----------LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
+YN + C + + +A + +++ N + Y ++K
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 698
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 7/176 (3%)
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
+ + M DQ V +YN+ L T+ D+ + + + TYS + C
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHF-------RETDKMWDVYKEIKDKNEHTYSTVVDGLC 198
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
+ A L ++ P+V ++N I+ CK V+ A ++ G+ P +
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
S+N + C ++ AL L S M K PD TYN++ K +G A EV
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 13/260 (5%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSIL 225
D A+ F +M G+ P + + ++++ LCK A +D+ L ++T+ L
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
+ G + G +AR L +++ G +D++ YN +D K GC++EA +F ++ +
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P T++ I+ YC +I A ++LD ++ L P+V +Y ++ + E
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 346 LLDEMILRGVKPDTWSYNAI--------QAHHCDHCEVSRAL----RLMSRMEKDNCFPD 393
L EM G+ P +Y+ I + +C+H R + + ME + PD
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 394 RHTYNMVLKLLIRIGRFDKA 413
+ TYN +++ L R+ A
Sbjct: 620 QITYNTIIQYLCRVKHLSGA 639
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 137/298 (45%), Gaps = 5/298 (1%)
Query: 125 GSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIK 182
G C+Q L D + +R S +I + F I Y + D A F + + G+
Sbjct: 196 GLCRQ-QKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLV 254
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKAREL 241
P+++ ++L+ LC + +A + H + + TY+IL G+ +G A E+
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT-YSIFIHTYC 300
+ MLD+G D++ Y L C+ G +D + DMLS+ E ++ S+ + C
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
I A + ++M+ L P++ Y+ +I LCK K + A L DEM + + P++
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
++ A+ C + A L+ + D YN+V+ + G ++A E+++
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 127/290 (43%), Gaps = 9/290 (3%)
Query: 133 LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEF-GIKPTIHDFDML 191
+WD E+++ N + + R + A+ FLR E+ I P++ F+ +
Sbjct: 175 MWDVYKEIKDK-----NEHTYSTVVDGLCRQQKLEDAVL-FLRTSEWKDIGPSVVSFNSI 228
Query: 192 LYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGC 250
+ CK V A+ FF K + + +++ILI+G +G +A EL M G
Sbjct: 229 MSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 288
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
D + YN G + A + DML K + PD TY+I + C +I
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLV 348
Query: 311 VL-DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHH 369
+L D + R L ++ + ++ LCK +++EA L ++M G+ PD +Y+ +
Sbjct: 349 LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL 408
Query: 370 CDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
C + AL L M P+ T+ +L L + G +A + ++
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 129/295 (43%), Gaps = 3/295 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G SV S +IL+ L A + ++M + E +S + + K + + G
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV-EPDSVTYNILAKGFHLLGMISG 310
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKT-YSILI 226
A M + G+ P + + +LL C+ ++ D F L + S+++
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
SG K G +A LF M G DL+AY+ + LCK G D A ++ +M KR+
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P++ T+ + C + A +LD + ++ YN +I K+ +EEA EL
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALEL 490
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
+I G+ P ++N++ +C ++ A +++ ++ P +Y ++
Sbjct: 491 FKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 190 MLLYFLCKRKHVKQAQQFFDQAKSHFL---LTAKTYSILISGWGKIGDSGKARELFQAML 246
++L LCK + +A F+Q K+ L L A YSI+I G K+G A L+ M
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA--YSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
D+ + + L LC+ G + EA ++ ++S D Y+I I Y + I
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
A + + + P+V T+N +I CK + EA ++LD + L G+ P SY +
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
+ + L M+ + P TY+++ K L R
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 124/282 (43%), Gaps = 25/282 (8%)
Query: 123 ILGSCKQFAIL-WDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGI 181
+LG C++ +L L + SS ++ ++ + Y+++ + A+ F + E GI
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 182 KPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARE 240
P++ F+ L+Y CK +++ +A++ D K + L + +Y+ L+ + G++ E
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
L + M +G P + Y+ LC+G + ++ + + ++ +
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG------------ 607
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
L M + P+ TYN II+ LC+ + A+ L+ M R + +
Sbjct: 608 -----------LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
+YN + C + + +A + +++ N + Y ++K
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIK 698
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 7/176 (3%)
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
+ + M DQ V +YN+ L T+ D+ + + + TYS + C
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHF-------RETDKMWDVYKEIKDKNEHTYSTVVDGLC 198
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
+ A L ++ P+V ++N I+ CK V+ A ++ G+ P +
Sbjct: 199 RQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVY 258
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
S+N + C ++ AL L S M K PD TYN++ K +G A EV
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 140/312 (44%), Gaps = 13/312 (4%)
Query: 109 GFQHSVESFHILVEI---LGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANL 165
G +V +F+ +++ G ++ +W EM+ + E + + + +S+
Sbjct: 233 GIMPTVITFNTMLDSCFKAGDLERVDKIW---LEMKRRNI-EFSEVTYNILINGFSKNGK 288
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSI 224
+ A R M G T + F+ L+ CK+ A D+ + T TY+I
Sbjct: 289 MEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNI 348
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
I G AREL +M P D+++YN + K G EA+ +F D+ +
Sbjct: 349 YICALCDFGRIDDARELLSSM---AAP-DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD 404
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+ P TY+ I C++ ++ A R+ ++M + P+V TY ++K KN + A
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMAT 464
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM-EKDNCFPDRHTYNMVLKL 403
E+ DEM+ +G+KPD ++Y + +A RL M D+ PD YN+ +
Sbjct: 465 EVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDG 524
Query: 404 LIRIGRFDKATE 415
L ++G KA E
Sbjct: 525 LCKVGNLVKAIE 536
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 148/362 (40%), Gaps = 71/362 (19%)
Query: 109 GFQHSVESFHILVEILGSCKQ--FAILWDFLTEMRESSCCEINSDIFWFI---------- 156
GF + SF+ L+E G CKQ F W EM + S +I
Sbjct: 303 GFAVTPYSFNPLIE--GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 157 --FKAYSRANLPD-----GAIRSFLRMDEF-------------GIKPTIHDFDMLLYFLC 196
+ S PD + +++M +F I P+I ++ L+ LC
Sbjct: 361 DARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420
Query: 197 KRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGC----- 250
+ +++ AQ+ ++ + + TY+ L+ G+ K G+ A E++ ML +G
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
Query: 251 -------------------------------PVDLLAYNNFLDALCKGGCVDEATNIFHD 279
DL YN +D LCK G + +A
Sbjct: 481 AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 540
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
+ + PD TY+ I Y + A + D+M R L P+V TY +I K +
Sbjct: 541 IFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGR 600
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
+E+A++ EM RGV+P+ ++NA+ C + A R + +ME++ P++++Y M
Sbjct: 601 LEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTM 660
Query: 400 VL 401
++
Sbjct: 661 LI 662
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 32/295 (10%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQ-FFDQAKSH 214
+ K + + + A + M E GI PT+ F+ +L K +++ + + + + +
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
+ TY+ILI+G+ K G +AR M G V ++N ++ CK G D+A
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL---------------------- 312
+ +ML+ + P TY+I+I CD I A +L
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMG 388
Query: 313 ---------DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYN 363
D +R ++ P++ TYN +I LC++ +E A L +EM + + PD +Y
Sbjct: 389 KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYT 448
Query: 364 AIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ + +S A + M + PD + Y +R+G DKA + E
Sbjct: 449 TLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 503
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%)
Query: 211 AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
A H Y++ I G K+G+ KA E + + G D + Y + + G
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
A N++ +ML KR+ P TY + I+ + A + AF+ +M++ + PNV T+N +
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
+ +CK ++EAY L +M G+ P+ +SY + + +CD + ++L M
Sbjct: 627 LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEI 686
Query: 391 FPDRHTYNMVLKLL 404
PD +T+ + K L
Sbjct: 687 EPDGYTHRALFKHL 700
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
KA +++ M++ G ++ +N LD+ K G ++ I+ +M + +E TY+I I
Sbjct: 221 KASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILI 280
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
+ + + A R MRR +++N +I+ CK ++A+ + DEM+ G+
Sbjct: 281 NGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIY 340
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
P T +YN CD + A L+S M PD +YN ++ I++G+F +A+ +
Sbjct: 341 PTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLL 396
Query: 417 WEN 419
+++
Sbjct: 397 FDD 399
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%)
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F+ M+ +G + N L L +++A+ ++ M+ + P T++ + +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
A D+ ++ +M+R N+ + TYN +I KN K+EEA +M G +S
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+N + +C A + M +P TYN+ + L GR D A E+
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAREL 365
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 2/174 (1%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKA 238
G+ P + ++ + K A+ +D+ + + TY +LI G K G +A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+ M +G +++ +N L +CK G +DEA M + + P+ ++Y++ I
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK 664
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
CD ++ +M + P+ +T+ + K L K+ + E E L+ ++L
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV-EFLERLLL 717
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF----DQA 211
+ ++Y R + A F RM G +P+ + ++L + K+A++ F D+
Sbjct: 180 LMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK 239
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
KS K Y ++I + K G+ KAR++F +M+ +G P + YN+ +
Sbjct: 240 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYK 296
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
E + I+ M ++PD +Y++ I Y A A V ++M + P YN ++
Sbjct: 297 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
+ VE+A + M + PD WSY + + + + ++ A + R++ D
Sbjct: 357 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWE 418
P+ TY ++K + +K EV+E
Sbjct: 417 PNIVTYGTLIKGYAKANDVEKMMEVYE 443
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 117/258 (45%), Gaps = 4/258 (1%)
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLT 218
Y +A + A + F M G+ + ++ L+ F K V + +DQ +S
Sbjct: 257 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV---SKIYDQMQRSDIQPD 313
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
+Y++LI +G+ +A +F+ MLD G AYN LDA G V++A +F
Sbjct: 314 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 373
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
M R+ PD ++Y+ + Y +A+D+ A + +++ PN+ TY +IK K +
Sbjct: 374 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 433
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
VE+ E+ ++M L G+K + I AL ME PD+ N
Sbjct: 434 DVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKN 493
Query: 399 MVLKLLIRIGRFDKATEV 416
++L L ++A E+
Sbjct: 494 VLLSLASTQDELEEAKEL 511
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 100/198 (50%), Gaps = 6/198 (3%)
Query: 224 ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
+LI+ +GK+G+ A + + G ++++Y +++ +GG + A IF M S
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM---RRCNLLPNVFTYNCIIKRLCKNDKV 340
EP A TY I + T+ + + A V + + ++ L P+ Y+ +I K
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
E+A ++ M+ +GV T +YN++ + + EVS ++ +M++ + PD +Y ++
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALL 320
Query: 401 LKLLIRIGRFDKATEVWE 418
+K R R ++A V+E
Sbjct: 321 IKAYGRARREEEALSVFE 338
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF----DQA 211
+ ++Y R + A F RM G +P+ + ++L + K+A++ F D+
Sbjct: 187 LMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK 246
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
KS K Y ++I + K G+ KAR++F +M+ +G P + YN+ +
Sbjct: 247 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET---SYK 303
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
E + I+ M ++PD +Y++ I Y A A V ++M + P YN ++
Sbjct: 304 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
+ VE+A + M + PD WSY + + + + ++ A + R++ D
Sbjct: 364 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 423
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWE 418
P+ TY ++K + +K EV+E
Sbjct: 424 PNIVTYGTLIKGYAKANDVEKMMEVYE 450
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 117/258 (45%), Gaps = 4/258 (1%)
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLT 218
Y +A + A + F M G+ + ++ L+ F K V + +DQ +S
Sbjct: 264 YKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV---SKIYDQMQRSDIQPD 320
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
+Y++LI +G+ +A +F+ MLD G AYN LDA G V++A +F
Sbjct: 321 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 380
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
M R+ PD ++Y+ + Y +A+D+ A + +++ PN+ TY +IK K +
Sbjct: 381 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 440
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
VE+ E+ ++M L G+K + I AL ME PD+ N
Sbjct: 441 DVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKN 500
Query: 399 MVLKLLIRIGRFDKATEV 416
++L L ++A E+
Sbjct: 501 VLLSLASTQDELEEAKEL 518
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 100/198 (50%), Gaps = 6/198 (3%)
Query: 224 ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
+LI+ +GK+G+ A + + G ++++Y +++ +GG + A IF M S
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM---RRCNLLPNVFTYNCIIKRLCKNDKV 340
EP A TY I + T+ + + A V + + ++ L P+ Y+ +I K
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
E+A ++ M+ +GV T +YN++ + + EVS ++ +M++ + PD +Y ++
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALL 327
Query: 401 LKLLIRIGRFDKATEVWE 418
+K R R ++A V+E
Sbjct: 328 IKAYGRARREEEALSVFE 345
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 164/371 (44%), Gaps = 7/371 (1%)
Query: 50 VSEISRVVSDHR-HPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIP 108
V++I VV + P + +L QF + + Q LK K + +A F WAK P
Sbjct: 143 VAKIVEVVQRWKWGPELETQLDKLQFVPNMVH--ITQSLKIVKEVD-AALSLFRWAKKQP 199
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRE--SSCCEINSDIFWFIFKAYSRANLP 166
+ S E + +L + L + F + EM + SS +++ + + + + ++A
Sbjct: 200 WYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKL 259
Query: 167 DGAIRSFLRMDEFGIKPTIHDFD-MLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSIL 225
+ A F + E G K ++ +++ FL K K + + K+ LL TY ++
Sbjct: 260 EVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELI 319
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I K G A +LFQ M ++ +++ +D++ K G +D + ++ +M
Sbjct: 320 IPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGH 379
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
P A + I +Y A + +A R+ D+M++ PN Y II+ K+ K+E A
Sbjct: 380 RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMT 439
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
+ +M G P +Y+ + H +V A+++ + M P +Y +L LL
Sbjct: 440 VFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLA 499
Query: 406 RIGRFDKATEV 416
D A ++
Sbjct: 500 NKRLVDVAGKI 510
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 95/215 (44%)
Query: 205 QQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
++ + SH L+ Y+ +I K A F+ + GC +D YNN +
Sbjct: 229 EEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLF 288
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
G +A I+ M D TY + I + + + +AF++ +M+ L P+
Sbjct: 289 LNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSF 348
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
++ ++ + K +++ + ++ EM G +P + ++ + ++ ALRL
Sbjct: 349 SVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDE 408
Query: 385 MEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
M+K P+ Y M+++ + G+ + A V+++
Sbjct: 409 MKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKD 443
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 114/282 (40%), Gaps = 2/282 (0%)
Query: 139 EMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKR 198
E E + ++ + I + +++ D A + F +M E ++P+ F L+ + K
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 199 KHVKQAQQFFDQAKS-HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
+ + + + + + +A + LI + K G A L+ M G + Y
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
+++ K G ++ A +F DM P TYS + + + + SA ++ + M
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
L P + +Y ++ L V+ A ++L EM G D + + + + D V
Sbjct: 482 AGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKD-ASVDL 540
Query: 378 ALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
AL+ + M + + + ++ G +D A + E
Sbjct: 541 ALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLET 582
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 147/328 (44%), Gaps = 6/328 (1%)
Query: 96 SAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF 155
S R L + + + + +++ +++ L Q + L + S + IF
Sbjct: 54 SVMRTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRD 113
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLC-KRKHVKQAQQFFDQA-KS 213
+ AY + + AI F ++ F P+ + + LL L KR+ ++ + +A +
Sbjct: 114 VIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRM 173
Query: 214 HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK---GGCV 270
L T+ ILI +IG+ A EL + M VD Y+ L ++CK C
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCF 233
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
D D+ R P Y++ + + VL++M+ + P++ Y +
Sbjct: 234 D-VIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIV 292
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
++ + ++ +A +L DE++L G+ PD ++YN C ++ AL++MS M K
Sbjct: 293 LQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGS 352
Query: 391 FPDRHTYNMVLKLLIRIGRFDKATEVWE 418
P+ TYN+++K L++ G +A +W+
Sbjct: 353 EPNVVTYNILIKALVKAGDLSRAKTLWK 380
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 1/204 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKT-YSILISGWGKIGDSGKAREL 241
P + D+ +++ FL + K+ +Q K + Y+I++ G D KA +L
Sbjct: 249 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 308
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F +L G D+ YN +++ LCK ++ A + M EP+ TY+I I
Sbjct: 309 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 368
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
A D+ A + +M + N T++ +I + D+V A+ LL+E V +
Sbjct: 369 AGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSR 428
Query: 362 YNAIQAHHCDHCEVSRALRLMSRM 385
+ + C+ + +A+ L++ +
Sbjct: 429 IEEVISRLCEKGLMDQAVELLAHL 452
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 181 IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKAR 239
++P + + ++L + + +A + FD+ L TY++ I+G K D A
Sbjct: 282 VEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGAL 341
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
++ +M G +++ YN + AL K G + A ++ +M + V ++ T+ I I Y
Sbjct: 342 KMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
+ +++ A +L++ N+ +I RLC+ +++A ELL ++
Sbjct: 402 IEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 194/467 (41%), Gaps = 69/467 (14%)
Query: 8 SLFSRYKNLTSVVCPLFQHKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHD- 66
SL S+ +L + + P + +P P P LP++ I ++ P H
Sbjct: 10 SLVSKSHHLPAPITPPLPE------IYRIPNPP---PKLPEI--SIPPTLTLSPSPKHSN 58
Query: 67 ----LELSLNQFSAQISSDLVEQVLKRCKNLGFSAH---RFFLWAKSIPGFQHSVESFHI 119
LE +L L+ + + +N AH F WA ++ F+H +SF
Sbjct: 59 FVNFLENNLPHHQTLTPQTLLGFLRSKIRNHPLYAHYDFAVFNWAATLDTFRHDHDSFLW 118
Query: 120 LVEILGSCKQFAILWDFLTEMRESSC--------CEINSDIFWFIFKAYSRANLPDGAIR 171
+ L + +F L+ L+ + + C C IF AY RA D A+
Sbjct: 119 MSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALL 178
Query: 172 SFLRMDEF-GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGW 229
+F M KP + ++ ++ K + +A +F+ + K T++ILI+G+
Sbjct: 179 AFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGY 238
Query: 230 GKIGDSGKARELFQAMLDQGCPVDLLAYNNFL---------------------------- 261
+ A +LF+ M ++GC +++++N +
Sbjct: 239 CRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSE 298
Query: 262 -------DALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
D LC+ G VD+A + D+L+KRV P F Y + C N A ++++
Sbjct: 299 ATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEE 358
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC--DH 372
+ + P +++ L K+ + E+A +++M+ G+ PD+ ++N + C DH
Sbjct: 359 LWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDH 418
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ LRL++ + PD TY++++ + GR K EV N
Sbjct: 419 STDANRLRLLASSKGYE--PDETTYHVLVSGFTKEGR-RKEGEVLVN 462
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 98/258 (37%), Gaps = 43/258 (16%)
Query: 116 SFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLR 175
+F+IL+ +F + D EM+E C E N F + + + + + ++
Sbjct: 230 TFNILINGYCRSSKFDLALDLFREMKEKGC-EPNVVSFNTLIRGFLSSGKIEEGVKMAYE 288
Query: 176 MDEFGIK-----------------------------------PTIHDFDMLLYFLCKRKH 200
M E G + P+ D+ L+ LC
Sbjct: 289 MIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENK 348
Query: 201 VKQA----QQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLA 256
+A ++ + + ++ + T L+ G K G + KA + M++ G D +
Sbjct: 349 AVRAMEMMEELWKKGQTPCFIACTT---LVEGLRKSGRTEKASGFMEKMMNAGILPDSVT 405
Query: 257 YNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR 316
+N L LC +A + SK EPD TY + + + ++++M
Sbjct: 406 FNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEML 465
Query: 317 RCNLLPNVFTYNCIIKRL 334
++LP++FTYN ++ L
Sbjct: 466 DKDMLPDIFTYNRLMDGL 483
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 18/364 (4%)
Query: 53 ISRVVSDHRHPHHDLE-----LSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSI 107
I R+ R P +D + L L+ +++ V VL + +FF WA
Sbjct: 80 IDRIFDILRAPSNDGDDRAFYLHLSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQ 139
Query: 108 PGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPD 167
PGF H+ +FH + +IL K ++ DFL C + + + Y+ A D
Sbjct: 140 PGFHHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRTD 199
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILIS 227
A++ F M G+ + +LL L + K FDQ + A T+SIL+
Sbjct: 200 IALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVK 259
Query: 228 GWGKIGDSGKARELFQAMLDQ---GCPVDLLAYNNFLDALCKGGCVDEATNIFHDM-LSK 283
+ K G +A + +A+L GC L +DALC EAT + ++ L
Sbjct: 260 KFCKQGKLDEAEDYLRALLPNDPAGCGSGL---GILVDALCSKRKFQEATKLLDEIKLVG 316
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDK---MRRCNLLPNVFTYNCIIKRLCKNDKV 340
V D Y+I+I A +++ L K + C L VF YN ++ +L K + +
Sbjct: 317 TVNMDR-AYNIWIRALIKAGFLNNPADFLQKISPLEGCEL--EVFRYNSMVFQLLKENNL 373
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
+ Y++L EM++RGV P+ + NA C V AL L + P +YN +
Sbjct: 374 DGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYL 433
Query: 401 LKLL 404
+ L
Sbjct: 434 IHTL 437
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 129/308 (41%), Gaps = 10/308 (3%)
Query: 116 SFHILVEILGSCK---QFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRS 172
+H+L+ L K F +++D ++ C + I F + + + +R+
Sbjct: 219 GYHVLLNALVEEKCFDSFDVIFDQISV--RGFVCAVTHSILVKKFCKQGKLDEAEDYLRA 276
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTA-KTYSILISGWGK 231
L D G + +L+ LC ++ ++A + D+ K + + Y+I I K
Sbjct: 277 LLPNDPAGCGSGL---GILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIK 333
Query: 232 IGDSGKARELFQAMLD-QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAF 290
G + Q + +GC +++ YN+ + L K +D +I +M+ + V P+
Sbjct: 334 AGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKK 393
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
T + + +C A + A + P +YN +I LC N+ VE+AY++L
Sbjct: 394 TMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGA 453
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRF 410
I RG +++ + C + A L+ + + P R ++ L +G+
Sbjct: 454 IDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKV 513
Query: 411 DKATEVWE 418
+ A + E
Sbjct: 514 EDALMINE 521
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 97/246 (39%), Gaps = 6/246 (2%)
Query: 163 ANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTY 222
A P A + MD GI PT+ ++L K + + A FF + + Y
Sbjct: 616 AGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRLY 675
Query: 223 SILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS 282
++I G K A + M +G + Y + LC DEA + ++
Sbjct: 676 QVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRK 735
Query: 283 KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC-NLLPNVFTYNCIIKRLCKNDKVE 341
AF ++ +H + ++ A+ +MR + +P + + +I +E
Sbjct: 736 SGRRITAFIGNVLLHNAMKSKGVYEAW---TRMRNIEDKIPEMKSLGELIGLFSGRIDME 792
Query: 342 EAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
+ LDE+I + D ++YN + + A ++ R+ + P+ T +M+L
Sbjct: 793 VELKRLDEVIEKCYPLDMYTYNML-LRMIVMNQAEDAYEMVERIARRGYVPNERT-DMIL 850
Query: 402 KLLIRI 407
+ RI
Sbjct: 851 ERANRI 856
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 143/311 (45%), Gaps = 4/311 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + S+ ++ LV L K F L ++++ E + + ++ +F I A S + D
Sbjct: 349 GHKPSLITYTTLVTALTRQKHFHSLLSLISKV-EKNGLKPDTILFNAIINASSESGNLDQ 407
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTA--KTYSILI 226
A++ F +M E G KPT F+ L+ K ++++ + D +L +T +IL+
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN-IFHDMLSKRV 285
W +A + M G D++ +N A + G A + I ML +V
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+P+ T ++ YC+ + A R +M+ + PN+F +N +IK + ++ E
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
++D M GVKPD +++ + ++ R + + M + PD H ++++ K
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYA 647
Query: 406 RIGRFDKATEV 416
R G +KA ++
Sbjct: 648 RAGEPEKAEQI 658
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 137/304 (45%), Gaps = 8/304 (2%)
Query: 110 FQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPD 167
Q + + +ILV+ + ++ W+ + +M+ + D+ F + KAY+R
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYG---VKPDVVTFNTLAKAYARIGSTC 512
Query: 168 GAIRSFL-RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSIL 225
A + RM +KP + ++ C+ +++A +FF + K + ++ L
Sbjct: 513 TAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSL 572
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G+ I D E+ M + G D++ ++ ++A G + I+ DML +
Sbjct: 573 IKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+PD +SI Y A + A ++L++MR+ + PNV Y II C ++++A +
Sbjct: 633 DPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQ 692
Query: 346 LLDEMI-LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+ +M + G+ P+ +Y + + + +A L+ ME N P R T ++
Sbjct: 693 VYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Query: 405 IRIG 408
IG
Sbjct: 753 KSIG 756
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 119/254 (46%), Gaps = 3/254 (1%)
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKT-YSI 224
P A F + E G KP++ + L+ L ++KH + + + L ++
Sbjct: 335 PQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNA 394
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML-SK 283
+I+ + G+ +A ++F+ M + GC +N + K G ++E++ + ML +
Sbjct: 395 IINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDE 454
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
++P+ T +I + +C+ I A+ ++ KM+ + P+V T+N + K + A
Sbjct: 455 MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA 514
Query: 344 YEL-LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
++ + M+ VKP+ + I +C+ ++ ALR RM++ P+ +N ++K
Sbjct: 515 EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 574
Query: 403 LLIRIGRFDKATEV 416
+ I D EV
Sbjct: 575 GFLNINDMDGVGEV 588
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 220 KTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
++ + L++G + G +A +F ++++G L+ Y + AL + ++
Sbjct: 320 RSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISK 379
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
+ ++PD ++ I+ ++ ++ A ++ +KM+ P T+N +IK K K
Sbjct: 380 VEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGK 439
Query: 340 VEEAYELLDEMILRG--VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
+EE+ LLD M+LR ++P+ + N + C+ ++ A ++ +M+ PD T+
Sbjct: 440 LEESSRLLD-MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 398 NMVLKLLIRIG 408
N + K RIG
Sbjct: 499 NTLAKAYARIG 509
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 253 DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
D+ + ++ L + G EA +IF+ ++ + +P TY+ + HS ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
K+ + L P+ +N II ++ +++A ++ ++M G KP ++N + +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 373 CEVSRALRLMSRMEKDNCF-PDRHTYNMVLK 402
++ + RL+ M +D P+ T N++++
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 157/357 (43%), Gaps = 11/357 (3%)
Query: 69 LSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKS-IPGFQHSVESFHILVEILGSC 127
+S+ ++ ++ L+ Q+LK+ KN +A + F AK P + H+ + +++ILG
Sbjct: 1 MSVVRWPRVLTPSLLSQILKKQKN-PVTALKLFEEAKERFPSYGHNGSVYATMIDILGKS 59
Query: 128 KQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHD 187
+ + + M+E SC E +F + + +SRA + AI F + EF
Sbjct: 60 NRVLEMKYVIERMKEDSC-ECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLS 118
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK--TYSILISGWGKIGDSGKARELFQAM 245
FD LL + K ++ A F + + + ++ ++L+ ++ S A ++FQ M
Sbjct: 119 FDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEM 178
Query: 246 LDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML----SKRVEPDAFTYSIFIHTYCD 301
QGC D +Y + C G ++EAT++ + M K D Y I + CD
Sbjct: 179 NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCD 238
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR--LCKNDKVEEAYELLDEMILRGVKPDT 359
A ++ A +L K+ R L Y+ I ++ +E LL E ++RG P
Sbjct: 239 AGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCL 298
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
SY+A+ + ++ ++ M P Y +K L R G+ +A V
Sbjct: 299 DSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV 355
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 5/242 (2%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKT-YSILISGWGK 231
F R+ + G I + +LL LC V A + + L K Y + +G +
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWE 273
Query: 232 IGDSG--KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDA 289
G + + L L +G L +Y+ L + G + E + M SK EP
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTP 333
Query: 290 FTYSIFIHTYCDANDIHSAFRVLDK-MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
F Y + C A + A V++K M + + LP V YN +IK LC + K EA L
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 349 EMILR-GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
+M + + +Y + C + A ++M M + FP TY+M++K L +
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Query: 408 GR 409
R
Sbjct: 454 DR 455
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 4/179 (2%)
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA--KSHFLL 217
+ L +G L M G +PT + + LC+ +K+A ++ + H L
Sbjct: 309 FEEGKLVEGE-EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNI 276
T Y++LI G G S +A + M Q C + Y +D LC+ G EA+ +
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
+ML K P TY + I CD + + A L++M +++P + + + +C
Sbjct: 428 MEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH-D 279
+YS + + + G + E+ AM +G Y + ALC+ G + EA ++ + +
Sbjct: 300 SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM-RRCNLLPNVFTYNCIIKRLCKND 338
M+ P Y++ I CD A L KM ++ + + N TY ++ LC++
Sbjct: 360 MMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDG 419
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
+ EA ++++EM+++ P +Y+ + CD A+ + M + P+ +
Sbjct: 420 QFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWK 479
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 157/357 (43%), Gaps = 11/357 (3%)
Query: 69 LSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKS-IPGFQHSVESFHILVEILGSC 127
+S+ ++ ++ L+ Q+LK+ KN +A + F AK P + H+ + +++ILG
Sbjct: 1 MSVVRWPRVLTPSLLSQILKKQKN-PVTALKLFEEAKERFPSYGHNGSVYATMIDILGKS 59
Query: 128 KQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHD 187
+ + + M+E SC E +F + + +SRA + AI F + EF
Sbjct: 60 NRVLEMKYVIERMKEDSC-ECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLS 118
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK--TYSILISGWGKIGDSGKARELFQAM 245
FD LL + K ++ A F + + + ++ ++L+ ++ S A ++FQ M
Sbjct: 119 FDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEM 178
Query: 246 LDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML----SKRVEPDAFTYSIFIHTYCD 301
QGC D +Y + C G ++EAT++ + M K D Y I + CD
Sbjct: 179 NYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCD 238
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR--LCKNDKVEEAYELLDEMILRGVKPDT 359
A ++ A +L K+ R L Y+ I ++ +E LL E ++RG P
Sbjct: 239 AGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCL 298
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
SY+A+ + ++ ++ M P Y +K L R G+ +A V
Sbjct: 299 DSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSV 355
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 5/242 (2%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKT-YSILISGWGK 231
F R+ + G I + +LL LC V A + + L K Y + +G +
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWE 273
Query: 232 IGDSG--KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDA 289
G + + L L +G L +Y+ L + G + E + M SK EP
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTP 333
Query: 290 FTYSIFIHTYCDANDIHSAFRVLDK-MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
F Y + C A + A V++K M + + LP V YN +IK LC + K EA L
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 349 EMILR-GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
+M + + +Y + C + A ++M M + FP TY+M++K L +
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Query: 408 GR 409
R
Sbjct: 454 DR 455
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 4/179 (2%)
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA--KSHFLL 217
+ L +G L M G +PT + + LC+ +K+A ++ + H L
Sbjct: 309 FEEGKLVEGE-EVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNI 276
T Y++LI G G S +A + M Q C + Y +D LC+ G EA+ +
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
+ML K P TY + I CD + + A L++M +++P + + + +C
Sbjct: 428 MEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH-D 279
+YS + + + G + E+ AM +G Y + ALC+ G + EA ++ + +
Sbjct: 300 SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM-RRCNLLPNVFTYNCIIKRLCKND 338
M+ P Y++ I CD A L KM ++ + + N TY ++ LC++
Sbjct: 360 MMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDG 419
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
+ EA ++++EM+++ P +Y+ + CD A+ + M + P+ +
Sbjct: 420 QFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWK 479
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 10/333 (3%)
Query: 89 RCKNLGFSAHRFFLWAKSIP-GFQHSVESFHILVEILGSCKQFAIL--WDFLTEMRESSC 145
+C NL F L+ I G+ V + +LV+ G KQ +L F +M S
Sbjct: 438 KCGNL---RSGFALYEDMIKMGYPPDVVIYGVLVD--GLSKQGLMLHAMRFSVKMLGQSI 492
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ 205
+N +F + + R N D A++ F M +GIKP + F ++ +++A
Sbjct: 493 -RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 206 -QFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
FF K A Y LI + K +LF M D+ N + L
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
K +++A+ F++++ ++EPD TY+ I YC + A R+ + ++ PN
Sbjct: 612 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 671
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
T +I LCKN+ ++ A + M +G KP+ +Y + ++ + +L
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731
Query: 385 MEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
M++ P +Y++++ L + GR D+AT ++
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKA 238
GI P + + +L+ LC+ + +A + Q K + TYS LI G+ K G+
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
L++ M+ G P D++ Y +D L K G + A ML + + + ++ I
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
+C N A +V M + P+V T+ +++ ++EEA L M G++PD
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPD 565
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+Y + C H + + L+L M+++ D N+V+ LL + R + A++ +
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 419 N 419
N
Sbjct: 626 N 626
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
T+ LI+G+ K G+ +A +LF+ M +G DL+AY+ +D K G + +F
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
L K V+ D +S I Y + D+ +A V +M + PNV TY +IK LC++ ++
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
EA+ + +++ RG++P +Y+++ C + L M K PD Y ++
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 401 LKLLIRIG 408
+ L + G
Sbjct: 468 VDGLSKQG 475
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 137/336 (40%), Gaps = 17/336 (5%)
Query: 94 GFSAHRFFLWAKSIPGFQHSVESFHILVEILG---------------SCKQFAILWDFLT 138
G SAH F L A G FH LV G S Q + L+
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLS 275
Query: 139 EMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKR 198
+ + N F + + + D A F M++ GI+P + + L+ K
Sbjct: 276 LVLDCGPAP-NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 199 KHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
+ + F QA + L +S I + K GD A +++ ML QG +++ Y
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
+ LC+ G + EA ++ +L + +EP TYS I +C ++ S F + + M +
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
P+V Y ++ L K + A +M+ + ++ + +N++ C
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 378 ALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
AL++ M PD T+ V+++ I GR ++A
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 108/238 (45%), Gaps = 5/238 (2%)
Query: 133 LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLL 192
L+D + + S+ + + + +FK + + A + F + E ++P I ++ ++
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIED----ASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 193 YFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCP 251
C + + +A++ F+ K + F T +ILI K D A +F M ++G
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 252 VDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRV 311
+ + Y +D K ++ + +F +M K + P +YSI I C + A +
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 312 LDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHH 369
+ LLP+V Y +I+ CK ++ EA L + M+ GVKPD A+ ++
Sbjct: 764 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYN 821
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 110/244 (45%), Gaps = 11/244 (4%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
+ A+ + P ++ F M I I +++++ L K ++ A +FF+
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN----- 626
Query: 216 LLTAK------TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGC 269
L+ K TY+ +I G+ + +A +F+ + + + + LCK
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 270 VDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNC 329
+D A +F M K +P+A TY + + + DI +F++ ++M+ + P++ +Y+
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 330 IIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN 389
II LCK +V+EA + + I + PD +Y + +C + A L M ++
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Query: 390 CFPD 393
PD
Sbjct: 807 VKPD 810
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 142/346 (41%), Gaps = 40/346 (11%)
Query: 96 SAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAIL--------------WDFLTEMR 141
SA ++F WA+ SF+ + +L F + ++ L +R
Sbjct: 85 SALKYFRWAE----ISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140
Query: 142 ESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHV 201
+ S +++D+ F+ + R + D A+ F+ + G+ +L L V
Sbjct: 141 DRS---LDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRV 197
Query: 202 KQAQQFFDQAKSHFLLTAKTYSILISGWGKI-------GDSGKARELFQAMLDQGCPVDL 254
FD+ L +S G + G+ KA + + ++++G V +
Sbjct: 198 DLIADHFDK-----LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI 252
Query: 255 LAYNNFLDALCKGGCVDE---ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRV 311
++ N L KG VD+ A+ + +L P+ T+ I+ +C ++ AF +
Sbjct: 253 VSCNKVL----KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDL 308
Query: 312 LDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCD 371
M + + P++ Y+ +I K + ++L + + +GVK D +++ +
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368
Query: 372 HCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+++ A + RM P+ TY +++K L + GR +A ++
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSIL 225
D A +M+ GI P + ++ ++ C++K++ A+ F L TYSIL
Sbjct: 460 DEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS-KR 284
I G + D A E+ M V+ + Y ++ LCK G +A + +M+ KR
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 579
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+ +Y+ I + ++ SA ++M + PNV TY ++ LCKN+++++A
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
E+ DEM +GVK D +Y A+ C + A L S + ++ P + YN ++
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 405 IRIGRFDKATEVWE 418
+G A ++++
Sbjct: 700 RNLGNMVAALDLYK 713
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Query: 162 RANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK- 220
+ N D A+ M G+K I + L+ CKR +++ A F + L ++
Sbjct: 631 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
Y+ LISG+ +G+ A +L++ ML G DL Y +D L K G + A+ ++ +M
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ + PD Y++ ++ ++ ++M++ N+ PNV YN +I + +
Sbjct: 751 QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL 810
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRL 381
+EA+ L DEM+ +G+ PD +++ + + + + RA L
Sbjct: 811 DEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 140/297 (47%), Gaps = 4/297 (1%)
Query: 123 ILGSCKQFAILWDF-LTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGI 181
I G CK ++ L + E NS F + + + + + A+ + +M+ G+
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 182 KPTI-HDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARE 240
P++ H ++ +L +KH ++A + FD++ L + ++S K G + +A E
Sbjct: 406 TPSVFHVHTIIQGWLKGQKH-EEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATE 464
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
L M +G ++++YNN + C+ +D A +F ++L K ++P+ +TYSI I
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI-LRGVKPDT 359
+D +A V++ M N+ N Y II LCK + +A ELL MI + +
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
SYN+I E+ A+ M + P+ TY ++ L + R D+A E+
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 13/287 (4%)
Query: 123 ILGSCK--QFAILWDFLTEMRES-----SCCEINSDIFWFIFKAYSRANLPDGAIRSFLR 175
I G CK Q + + L M E SC NS I + + D A+ ++
Sbjct: 555 INGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS-----IIDGFFKEGEMDSAVAAYEE 609
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGD 234
M GI P + + L+ LCK + QA + D+ K+ + L Y LI G+ K +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
A LF +L++G YN+ + G + A +++ ML + D TY+
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I ++ A + +M+ L+P+ Y I+ L K + + ++ +EM
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
V P+ YNA+ A H + A RL M PD T+++++
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 149/358 (41%), Gaps = 56/358 (15%)
Query: 83 VEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQF------------ 130
V VL +N +A RF+ WA+ G + F +L+ IL S +
Sbjct: 75 VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYV 134
Query: 131 ---------AILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGI 181
++L L + +S E+NS F ++ AYS+ D A+ +M E +
Sbjct: 135 STSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDV 194
Query: 182 KPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKAREL 241
P + L L +R + +A++ + + + G GD+ + L
Sbjct: 195 IPFFPYVNRTLSALVQRNSLTEAKELYSR---------------MVAIGVDGDNVTTQLL 239
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
+A L + P EA + + + EPD+ YS+ + C
Sbjct: 240 MRASLREEKPA-------------------EALEVLSRAIERGAEPDSLLYSLAVQACCK 280
Query: 302 ANDIHSAFRVLDKMRRCNL-LPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
D+ A +L +M+ L +P+ TY +I K +++A L DEM+ G+ +
Sbjct: 281 TLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVV 340
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ ++ HC + ++ AL L +MEK+ P+ T++++++ + G +KA E ++
Sbjct: 341 AATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYK 398
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 115/272 (42%), Gaps = 13/272 (4%)
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFL-----CKRKHVKQAQQFFD 209
+ +A R P A+ R E G +P D LLY L CK + A
Sbjct: 238 LLMRASLREEKPAEALEVLSRAIERGAEP-----DSLLYSLAVQACCKTLDLAMANSLLR 292
Query: 210 QAKSHFLL--TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
+ K L + +TY+ +I K G+ A L ML G ++++A + + CK
Sbjct: 293 EMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKN 352
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
+ A +F M + P++ T+S+ I + ++ A KM L P+VF
Sbjct: 353 NDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHV 412
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
+ II+ K K EEA +L DE G+ + + N I + C + A L+S+ME
Sbjct: 413 HTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMES 471
Query: 388 DNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
P+ +YN V+ R D A V+ N
Sbjct: 472 RGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TY+ L++G K +A E+ M ++G +D+ AY +D CK ++ A+ +F ++
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
L + + P Y+ I + + ++ +A + KM + L ++ TY +I L K+ +
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNL 740
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
A EL EM G+ PD Y I + + +++ M+K+N P+ YN V
Sbjct: 741 ILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 800
Query: 401 LKLLIRIGRFDKA 413
+ R G D+A
Sbjct: 801 IAGHYREGNLDEA 813
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 105/233 (45%), Gaps = 2/233 (0%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQ--AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAM 245
+ ++ LCK +A++ + ++ +Y+ +I G+ K G+ A ++ M
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 246 LDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDI 305
G +++ Y + ++ LCK +D+A + +M +K V+ D Y I +C +++
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 306 HSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
SA + ++ L P+ YN +I + A +L +M+ G++ D +Y +
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 366 QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ A L + M+ PD Y +++ L + G+F K +++E
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFE 783
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 126/304 (41%), Gaps = 2/304 (0%)
Query: 117 FHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRM 176
F+ L++ L + + L M+ C N+ + + Y RA + A RM
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDS 235
E IKP + + ++ +C+ + A FF D K TY LI + +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIF 295
KA ++ ML+ GC D Y + LC+ +A + + D Y++
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
I +CD N+ + +L M + P+ TYN +I K+ E ++++M G+
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRME-KDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
P +Y A+ +C E+ AL+L M P+ YN+++ ++G F +A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 415 EVWE 418
+ E
Sbjct: 673 SLKE 676
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 145/348 (41%), Gaps = 48/348 (13%)
Query: 117 FHILVEILGSCKQFAILWDFLTEMRESSCCEINSDI--FWFIFKAYSRANLPDGAIRSFL 174
F+ L+ LG + + D + +M E +I D+ + ++ D A+ F
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDE---VKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 175 RM------DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK--SHFLLTAKTYSILI 226
+M D IK F+ L+ LCK +K+A++ + K A TY+ LI
Sbjct: 354 KMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLI 413
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
G+ + G A+E+ M + +++ N + +C+ ++ A F DM + V+
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 287 PDAFTYSIFIHTYCDANDI-----------------------------------HSAFRV 311
+ TY IH C +++ H A RV
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 312 LDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCD 371
++K++ ++ YN +I C + E+ YE+L +M G KPD+ +YN + +
Sbjct: 534 VEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGK 593
Query: 372 HCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
H + R+M +M +D P TY V+ +G D+A +++++
Sbjct: 594 HKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKD 641
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 129/295 (43%), Gaps = 3/295 (1%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
C++ G + F G + +V ++ L+ S + +M E+ C +
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP-D 510
Query: 150 SDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF- 208
+ I++ + + AIR ++ E G + ++ML+ C + + ++ +
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLT 570
Query: 209 DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
D K + TY+ LIS +GK D + + M + G + Y +DA C G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 269 CVDEATNIFHDM-LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
+DEA +F DM L +V P+ Y+I I+ + + A + ++M+ + PNV TY
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLM 382
N + K L + + E +L+DEM+ + +P+ + + E+ + + M
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 12/254 (4%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIG 233
R G+ P + LCK A D K+ L A ++ L+S G+
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR------VEP 287
D + +L M + D++ ++ LCK VDEA +F M KR ++
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMR---RCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
D+ ++ I C + A +L +M+ RC PN TYNC+I C+ K+E A
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERC--APNAVTYNCLIDGYCRAGKLETAK 426
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
E++ M +KP+ + N I C H ++ A+ MEK+ + TY ++
Sbjct: 427 EVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486
Query: 405 IRIGRFDKATEVWE 418
+ +KA +E
Sbjct: 487 CSVSNVEKAMYWYE 500
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 106/243 (43%), Gaps = 20/243 (8%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKAR 239
G +P D + LY + K K++ LT ++LI +G++G ++
Sbjct: 127 GSEPDPRDKLLRLYEIAKEKNIP--------------LTVVATNLLIRWFGRMGMVNQSV 172
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR--VEPDAFTYSIFIH 297
+++ LD + N +D L + G VD+A + +ML K P+ T I +H
Sbjct: 173 LVYER-LDSNMK-NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH 230
Query: 298 TYCDANDI--HSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
+ ++ + + PN I LCKN + A+++L +++
Sbjct: 231 EVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKT 290
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
+ +NA+ + + ++SR L+ +M++ PD T +++ L + R D+A E
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 416 VWE 418
V+E
Sbjct: 351 VFE 353
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 183/423 (43%), Gaps = 59/423 (13%)
Query: 5 AFRSLFSRYKNLTSVVCPLFQHKQNCHHFHSLPTPQVFN-------PL---LPDLVSEIS 54
+F S F R ++ S V H + + F + + F+ PL L DL+ ++S
Sbjct: 43 SFSSAFHRAGHVHSQVLSYLPHFASSNRFSTKTISETFDINLTALAPLEKGLIDLIRQVS 102
Query: 55 RVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSV 114
+ S+ D SL S ++ D ++ ++ A F W +
Sbjct: 103 ELESEA-----DAMASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRGCDDQ-- 155
Query: 115 ESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFL 174
+S +++ +LG+ ++F I W + +M S + + + Y+ AN AIR+F
Sbjct: 156 KSCDLMIWVLGNHQKFNIAWCLIRDMFNVS--KDTRKAMFLMMDRYAAANDTSQAIRTFD 213
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGD 234
MD+F P F LL LC+ H+++A++F +K F
Sbjct: 214 IMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLF------------------- 254
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGC-VDEATNIFHDMLSKRVEPDAFTYS 293
PVD+ +N L+ C V EA I+ +M + + P+ +YS
Sbjct: 255 ----------------PVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYS 298
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I + ++ + R+ D+M++ L P + YN ++ L + D +EA +L+ ++
Sbjct: 299 HMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEE 358
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
G+KPD+ +YN++ C+ ++ A +++ M +N P T++ L+ + F+K
Sbjct: 359 GLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKT 414
Query: 414 TEV 416
EV
Sbjct: 415 LEV 417
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 3/261 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRAN-LPD 167
G + S +++IL++ Q I+ L EM E E N + + AY R + D
Sbjct: 409 GLKPSAATYNILMDAYARRMQPDIVETLLREM-EDLGLEPNVKSYTCLISAYGRTKKMSD 467
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLY-FLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILI 226
A +FLRM + G+KP+ H + L++ + H K F + K + +TY+ ++
Sbjct: 468 MAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVL 527
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
+ + GD+GK E+++ ML + + YN LD K G EA ++ + ++
Sbjct: 528 DAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQ 587
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P TY++ ++ Y ++L +M NL P+ TY+ +I + + A+
Sbjct: 588 PSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFY 647
Query: 347 LDEMILRGVKPDTWSYNAIQA 367
M+ G PD SY ++A
Sbjct: 648 HKMMVKSGQVPDPRSYEKLRA 668
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 3/278 (1%)
Query: 138 TEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCK 197
TEM E N+ ++ + AY+++N + F M + G+KP+ +++L+ +
Sbjct: 368 TEM-EKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYAR 426
Query: 198 RKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGD-SGKARELFQAMLDQGCPVDLL 255
R + + + L K+Y+ LIS +G+ S A + F M G
Sbjct: 427 RMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSH 486
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
+Y + A G ++A F +M + ++P TY+ + + + D + M
Sbjct: 487 SYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM 546
Query: 316 RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEV 375
R + TYN ++ K EA +++ E G++P +YN + + +
Sbjct: 547 LREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQD 606
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
++ +L+ M N PD TY+ ++ +R+ F +A
Sbjct: 607 AKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRA 644
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 126/294 (42%), Gaps = 4/294 (1%)
Query: 119 ILVEILGSCKQFAI-LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMD 177
IL+ L + A +W+ +M E + + D+F + K++ L + A+ M+
Sbjct: 313 ILITTLRKAGRSAKEVWEIFEKMSEKGV-KWSQDVFGGLVKSFCDEGLKEEALVIQTEME 371
Query: 178 EFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSG 236
+ GI+ ++ L+ K H+++ + F + + L +A TY+IL+ + +
Sbjct: 372 KKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPD 431
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV-DEATNIFHDMLSKRVEPDAFTYSIF 295
L + M D G ++ +Y + A + + D A + F M ++P + +Y+
Sbjct: 432 IVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTAL 491
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
IH Y + A+ ++M + + P+V TY ++ ++ + E+ M+ +
Sbjct: 492 IHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKI 551
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGR 409
K +YN + A ++S K P TYNM++ R G+
Sbjct: 552 KGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQ 605
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 245 MLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAND 304
M +G + + YN +DA K ++E +F +M K ++P A TY+I + Y
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 305 IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEE-AYELLDEMILRGVKPDTWSYN 363
+L +M L PNV +Y C+I + K+ + A + M G+KP + SY
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYT 489
Query: 364 AIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
A+ + +A M K+ P TY VL R G K E+W+
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWK 544
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 2/200 (1%)
Query: 221 TYSILISGWGKIGDSGKAR-ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
T +ILI+ K G S K E+F+ M ++G + + + C G +EA I +
Sbjct: 310 TCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTE 369
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
M K + + Y+ + Y +N I + +MR L P+ TYN ++ + +
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVS-RALRLMSRMEKDNCFPDRHTYN 398
+ LL EM G++P+ SY + + + ++S A RM+K P H+Y
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYT 489
Query: 399 MVLKLLIRIGRFDKATEVWE 418
++ G +KA +E
Sbjct: 490 ALIHAYSVSGWHEKAYASFE 509
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 179/443 (40%), Gaps = 73/443 (16%)
Query: 37 PTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFS 96
P PQ+ N LL V+ +S+ +S SL+ S IS +V Q+L+R
Sbjct: 23 PFPQLCNVLL---VASLSKTLS------QSGTRSLDANSIPISEPVVLQILRRNSIDPSK 73
Query: 97 AHRFFLWAKSI-PGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF 155
FF W S+ PG++HS ++ + + + D L M+E ++ +
Sbjct: 74 KLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGV-NLDQTMAKI 132
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFG--IKPTIHDFDMLLYFLCKRKHVKQA--------- 204
+ + R+ + A+ M+E G + P++ +D +L L K+ ++ A
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNPSV--YDSVLIALVKKHELRLALSILFKLLE 190
Query: 205 -----------------------------------------QQFFDQAKS--HFLLTAKT 221
++ F++ K F +
Sbjct: 191 ASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWS 250
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGC------PVDLLAYNNFLDALCKGGCVDEATN 275
Y+I I G+G GD A LF+ M ++ D+ YN+ + LC G +A
Sbjct: 251 YNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI 310
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
++ ++ EPD TY I I C + + A R+ +M+ +P+ YNC++
Sbjct: 311 VWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTL 370
Query: 336 KNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRH 395
K KV EA +L ++M+ GV+ W+YN + + L ++K F D
Sbjct: 371 KARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAI 430
Query: 396 TYNMVLKLLIRIGRFDKATEVWE 418
T+++V L R G+ + A ++ E
Sbjct: 431 TFSIVGLQLCREGKLEGAVKLVE 453
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 184 TIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELF 242
T + ++ ++ K+ + + A+ DQ +F TY+++I G GK+G + A +
Sbjct: 629 TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA 302
+ QG +D++ YN ++AL K +DEAT +F M S + PD +Y+ I A
Sbjct: 689 DRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 303 NDIHSAFRVLDKMRRCNLLPNVFT 326
+ A++ L M LPN T
Sbjct: 749 GKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 3/229 (1%)
Query: 171 RSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILISGW 229
RS + FG P I ++ L++ LC K A +D+ K S TY ILI G
Sbjct: 277 RSSVYGSSFG--PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGC 334
Query: 230 GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDA 289
K A ++ M G D + YN LD K V EA +F M+ + V
Sbjct: 335 CKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASC 394
Query: 290 FTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDE 349
+TY+I I + F + +++ + T++ + +LC+ K+E A +L++E
Sbjct: 395 WTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEE 454
Query: 350 MILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
M RG D + +++ +LM + + N P+ +N
Sbjct: 455 METRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWN 503
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 5/182 (2%)
Query: 182 KPTIHDFDMLLYFLC---KRKHVKQAQQFFDQAKSHFL--LTAKTYSILISGWGKIGDSG 236
KP D DM+ FL + + A + F+ + LT+ TY+ ++S + K G
Sbjct: 588 KPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQ 647
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
AR + M + C D+ YN + L K G D A+ + + + D Y+ I
Sbjct: 648 TARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLI 707
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
+ A + A ++ D M+ + P+V +YN +I+ K K++EAY+ L M+ G
Sbjct: 708 NALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCL 767
Query: 357 PD 358
P+
Sbjct: 768 PN 769
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 7/189 (3%)
Query: 233 GDSGKARELFQAMLDQGCPVDLLAY--NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAF 290
GD A +LF+ G DL +Y N+ + + K G A + M D
Sbjct: 608 GDLSLACKLFEIFNGMGV-TDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIA 666
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
TY++ I A VLD++ + ++ YN +I L K +++EA +L D M
Sbjct: 667 TYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHM 726
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL---IRI 407
G+ PD SYN + + ++ A + + M C P+ H + +L L +
Sbjct: 727 KSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN-HVTDTILDYLGKEMEK 785
Query: 408 GRFDKATEV 416
RF KA+ V
Sbjct: 786 ARFKKASFV 794
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 101/227 (44%), Gaps = 8/227 (3%)
Query: 110 FQHSVESFHILVEIL---GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLP 166
F + +++ L+ +L G K I+WD L + S E ++ + + + ++
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDEL----KVSGHEPDNSTYRILIQGCCKSYRM 340
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSIL 225
D A+R + M G P ++ LL K + V +A Q F++ + + TY+IL
Sbjct: 341 DDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNIL 400
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
I G + G + LF + +G VD + ++ LC+ G ++ A + +M ++
Sbjct: 401 IDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGF 460
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
D T S + + +++ +R NL+PNV +N ++
Sbjct: 461 SVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVE 507
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 100/242 (41%), Gaps = 15/242 (6%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILISGWGKIGDSGKA 238
G +P + +L+ CK + A + + + + + F+ Y+ L+ G K +A
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+LF+ M+ +G YN +D L + G + +F D+ K DA T+SI
Sbjct: 379 CQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQ 438
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
C + A +++++M ++ T + ++ K + + +L+ + + P+
Sbjct: 439 LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC--FPDRHTYNMVLKLLIRIGRFDKATEV 416
+NA V +L+ +KD FP + ++ L ++ +G D
Sbjct: 499 VLRWNA---------GVEASLKRPQSKDKDYTPMFPSKGSF---LDIMSMVGSEDDGASA 546
Query: 417 WE 418
E
Sbjct: 547 EE 548
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 126/304 (41%), Gaps = 2/304 (0%)
Query: 117 FHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRM 176
F+ L++ L + + L M+ C N+ + + Y RA + A RM
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDS 235
E IKP + + ++ +C+ + A FF D K TY LI + +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIF 295
KA ++ ML+ GC D Y + LC+ +A + + D Y++
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
I +CD N+ + +L M + P+ TYN +I K+ E ++++M G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRME-KDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
P +Y A+ +C E+ AL+L M P+ YN+++ ++G F +A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 415 EVWE 418
+ E
Sbjct: 673 SLKE 676
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 131/324 (40%), Gaps = 78/324 (24%)
Query: 174 LRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF-----LLTAKT--YSILI 226
L+MDE I+P + +L+ LCK + V +A + F+Q + ++ A + ++ LI
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 227 SGWGKIGDSGKARELFQAM-LDQGCPVDLLAYNNFLDALCKGGCVDEATNI--------- 276
G K+G +A EL M L++ C + + YN +D C+ G ++ A +
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 277 --------------------------FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSA-- 308
F DM + V+ + TY IH C +++ A
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 309 ---------------------------------FRVLDKMRRCNLLPNVFTYNCIIKRLC 335
RV++K++ ++ YN +I C
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 336 KNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRH 395
+ E+ YE+L +M G KPD+ +YN + + H + R+M +M +D P
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 396 TYNMVLKLLIRIGRFDKATEVWEN 419
TY V+ +G D+A +++++
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKD 641
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 129/295 (43%), Gaps = 3/295 (1%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
C++ G + F G + +V ++ L+ S + +M E+ C +
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP-D 510
Query: 150 SDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF- 208
+ I++ + + AIR ++ E G + ++ML+ C + + ++ +
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 209 DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
D K + TY+ LIS +GK D + + M + G + Y +DA C G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 269 CVDEATNIFHDM-LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
+DEA +F DM L +V P+ Y+I I+ + + A + ++M+ + PNV TY
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLM 382
N + K L + + E +L+DEM+ + +P+ + + E+ + + M
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFM 745
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 12/254 (4%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIG 233
R G+ P + LCK A D K+ L A ++ L+S G+
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR------VEP 287
D + +L M + D++ ++ LCK VDEA +F M KR ++
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMR---RCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
D+ ++ I C + A +L +M+ RC +PN TYNC+I C+ K+E A
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERC--VPNAVTYNCLIDGYCRAGKLETAK 426
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
E++ M +KP+ + N I C H ++ A+ MEK+ + TY ++
Sbjct: 427 EVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486
Query: 405 IRIGRFDKATEVWE 418
+ +KA +E
Sbjct: 487 CSVSNVEKAMYWYE 500
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 20/243 (8%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKAR 239
G +P D + LY + K K++ LT +LI +G++G ++
Sbjct: 127 GSEPDPRDKLLRLYEIAKEKNIP--------------LTIVATKLLIRWFGRMGMVNQSV 172
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR--VEPDAFTYSIFIH 297
+++ LD + N +D L + G VD+A + +ML K P+ T I +H
Sbjct: 173 LVYER-LDSNMK-NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH 230
Query: 298 TYCDANDI--HSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
+ ++ + + PN I LCKN + A+++L +++
Sbjct: 231 EVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKT 290
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
+ +NA+ + + ++SR L+ +M++ PD T +++ L + R D+A E
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 416 VWE 418
V+E
Sbjct: 351 VFE 353
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 141/312 (45%), Gaps = 8/312 (2%)
Query: 50 VSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGF-SAHRFFLWAKSIP 108
VS R+ + +LE L + Q+ S + +VL+RC F S RFF+WA ++
Sbjct: 30 VSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQSGLRFFIWAGTLS 89
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
+HS + +IL + L ++ E C +N + ++ANL D
Sbjct: 90 SHRHSAYMYTKACDIL-KIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADE 148
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILIS 227
A+ + EF + +++++ + + A + L TY+ +I+
Sbjct: 149 ALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMIN 208
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR--- 284
G+ G A L + M C ++ + Y+ L+ +CK G ++ A + +M +
Sbjct: 209 GYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGG 268
Query: 285 -VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK-VEE 342
+ P+A TY++ I +C+ + A VLD+M +PN T +I+ + +ND+ V+
Sbjct: 269 LISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKA 328
Query: 343 AYELLDEMILRG 354
+L+D+++ G
Sbjct: 329 LSKLIDKLVKLG 340
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
DEA + V D Y++ I + D D++ A ++ +M L P+V TY +
Sbjct: 147 DEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSM 206
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN- 389
I C K+++A+ L EM ++ +Y+ I C ++ RAL L++ MEK++
Sbjct: 207 INGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDG 266
Query: 390 ---CFPDRHTYNMVLKLLIRIGRFDKA 413
P+ TY +V++ R ++A
Sbjct: 267 GGLISPNAVTYTLVIQAFCEKRRVEEA 293
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 279 DMLSKRVEPDAFTYSI----------------FIHTYCD-ANDIHSAFRVLDKMRRCNLL 321
D+L R +PD Y I + T C+ AN A VL K N+
Sbjct: 103 DILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVC 162
Query: 322 PNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRL 381
+ YN +I+ + A L+ EM G+ PD +Y ++ +C+ ++ A RL
Sbjct: 163 ADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRL 222
Query: 382 MSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
M K +C + TY+ +L+ + + G ++A E+
Sbjct: 223 AKEMSKHDCVLNSVTYSRILEGVCKSGDMERALEL 257
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 124/257 (48%), Gaps = 12/257 (4%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSIL 225
DG +R M E G P ++ L+ LC +V +A F+ + + + T +I+
Sbjct: 176 DGLVR---EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNII 232
Query: 226 ISGW---GKIGDSGKARELFQAMLDQG---CPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
+ G IG++ K +L + +LD P+D++ +D+ K G V +A ++ +
Sbjct: 233 VHALCQKGVIGNNNK--KLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKE 290
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
M K V D+ Y++ I C + ++ +A+ + M + + P+VFTYN +I LCK K
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGK 350
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
+EA +L M GV PD SY I C H +V+RA + M K + P+ +N+
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 400 VLKLLIRIGRFDKATEV 416
V+ R G A V
Sbjct: 411 VIDGYGRYGDTSSALSV 427
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 145/324 (44%), Gaps = 22/324 (6%)
Query: 101 FLWAKSIPGFQHSVESFHILVEILGSCKQFAI--LWDFLTEMRE----SSCCEINSDIFW 154
+++ IPG + H+L G CK I + EMRE +C N+
Sbjct: 147 MIYSGVIPGL---ITHNHLLN---GLCKAGYIEKADGLVREMREMGPSPNCVSYNT---- 196
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHV-----KQAQQFFD 209
+ K N D A+ F M+++GI+P +++++ LC++ + K ++ D
Sbjct: 197 -LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILD 255
Query: 210 QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGC 269
++++ L +IL+ K G+ +A E+++ M + P D + YN + LC G
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGN 315
Query: 270 VDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNC 329
+ A DM+ + V PD FTY+ I C A + M+ + P+ +Y
Sbjct: 316 MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKV 375
Query: 330 IIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN 389
II+ LC + V A E L M+ + P+ +N + + + + S AL +++ M
Sbjct: 376 IIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG 435
Query: 390 CFPDRHTYNMVLKLLIRIGRFDKA 413
P+ +T N ++ ++ GR A
Sbjct: 436 VKPNVYTNNALIHGYVKGGRLIDA 459
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGD 234
M + G+ P + ++ L+ LCK +A ++ + + +Y ++I G GD
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
+A E +ML ++L +N +D + G A ++ + MLS V+P+ +T +
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
IH Y + A+ V ++MR + P+ TYN ++ C + A++L DEM+ RG
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
+PD +Y + C + +A L+SR++ D + ++ K R+ R +A
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Query: 415 EVWE 418
V++
Sbjct: 566 LVYK 569
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 39/234 (16%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
T++ L++G K G KA L + M + G + ++YN + LC VD+A +F+ M
Sbjct: 158 THNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM 217
Query: 281 LSKRVEPDAFTYSIFIHTYCDA-------------------------------------- 302
+ P+ T +I +H C
Sbjct: 218 NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFK 277
Query: 303 -NDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
++ A V +M + N+ + YN II+ LC + + AY + +M+ RGV PD ++
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFT 337
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
YN + + C + A L M+ PD+ +Y ++++ L G ++A E
Sbjct: 338 YNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANE 391
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 39/223 (17%)
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
G A L + M+ G L+ +N+ L+ LCK G +++A + +M P+ +Y
Sbjct: 135 GKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSY 194
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC----------------- 335
+ I C N++ A + + M + + PN T N I+ LC
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 336 ----------------------KNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
KN V +A E+ EM + V D+ YN I C
Sbjct: 255 DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSG 314
Query: 374 EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ A M M K PD TYN ++ L + G+FD+A ++
Sbjct: 315 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%)
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
+S + C + +A + KM ++P + T+N ++ LCK +E+A L+ EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
G P+ SYN + C V +AL L + M K P+R T N+++ L + G
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 4/169 (2%)
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
L +++ + LC G +D A + M+ V P T++ ++ C A I A ++
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVR 180
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
+MR PN +YN +IK LC + V++A L + M G++P+ + N I C
Sbjct: 181 EMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKG 240
Query: 374 EVS----RALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ + L + + N D +++ + G +A EVW+
Sbjct: 241 VIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWK 289
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 126/304 (41%), Gaps = 2/304 (0%)
Query: 117 FHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRM 176
F+ L++ L + + L M+ C N+ + + Y RA + A RM
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDS 235
E IKP + + ++ +C+ + A FF D K TY LI + +
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIF 295
KA ++ ML+ GC D Y + LC+ +A + + D Y++
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
I +CD N+ + +L M + P+ TYN +I K+ E ++++M G+
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRME-KDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
P +Y A+ +C E+ AL+L M P+ YN+++ ++G F +A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 415 EVWE 418
+ E
Sbjct: 673 SLKE 676
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 131/324 (40%), Gaps = 78/324 (24%)
Query: 174 LRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF-----LLTAKT--YSILI 226
L+MDE I+P + +L+ LCK + V +A + F+Q + ++ A + ++ LI
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 227 SGWGKIGDSGKARELFQAM-LDQGCPVDLLAYNNFLDALCKGGCVDEATNI--------- 276
G K+G +A EL M L++ C + + YN +D C+ G ++ A +
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 277 --------------------------FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSA-- 308
F DM + V+ + TY IH C +++ A
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 309 ---------------------------------FRVLDKMRRCNLLPNVFTYNCIIKRLC 335
RV++K++ ++ YN +I C
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 336 KNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRH 395
+ E+ YE+L +M G KPD+ +YN + + H + R+M +M +D P
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 396 TYNMVLKLLIRIGRFDKATEVWEN 419
TY V+ +G D+A +++++
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKD 641
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 3/264 (1%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
C++ G + F G + +V ++ L+ S + +M E+ C +
Sbjct: 452 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP-D 510
Query: 150 SDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF- 208
+ I++ + + AIR ++ E G + ++ML+ C + + ++ +
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 209 DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
D K + TY+ LIS +GK D + + M + G + Y +DA C G
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 269 CVDEATNIFHDM-LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
+DEA +F DM L +V P+ Y+I I+ + + A + ++M+ + PNV TY
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 328 NCIIKRLCKNDKVEEAYELLDEMI 351
N + K L + + E +L+DEM+
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMV 714
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 12/254 (4%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIG 233
R G+ P + LCK A D K+ L A ++ L+S G+
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR------VEP 287
D + +L M + D++ ++ LCK VDEA +F M KR ++
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMR---RCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
D+ ++ I C + A +L +M+ RC +PN TYNC+I C+ K+E A
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERC--VPNAVTYNCLIDGYCRAGKLETAK 426
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
E++ M +KP+ + N I C H ++ A+ MEK+ + TY ++
Sbjct: 427 EVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHAC 486
Query: 405 IRIGRFDKATEVWE 418
+ +KA +E
Sbjct: 487 CSVSNVEKAMYWYE 500
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 20/243 (8%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKAR 239
G +P D + LY + K K++ LT +LI +G++G ++
Sbjct: 127 GSEPDPRDKLLRLYEIAKEKNIP--------------LTIVATKLLIRWFGRMGMVNQSV 172
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR--VEPDAFTYSIFIH 297
+++ LD + N +D L + G VD+A + +ML K P+ T I +H
Sbjct: 173 LVYER-LDSNMK-NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH 230
Query: 298 TYCDANDI--HSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
+ ++ + + PN I LCKN + A+++L +++
Sbjct: 231 EVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKT 290
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
+ +NA+ + + ++SR L+ +M++ PD T +++ L + R D+A E
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 416 VWE 418
V+E
Sbjct: 351 VFE 353
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 142/340 (41%), Gaps = 16/340 (4%)
Query: 89 RCKNLGFSAHRFFLWAKSIP-GFQHSVESFHILVEILGSCKQFAIL--WDFLTEMRESSC 145
+C NL F L+ I G+ V + +LV+ G KQ +L F +M S
Sbjct: 438 KCGNL---RSGFALYEDMIKMGYPPDVVIYGVLVD--GLSKQGLMLHAMRFSVKMLGQSI 492
Query: 146 CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYF------LCKRK 199
+N +F + + R N D A++ F M +GIKP + F ++ CK
Sbjct: 493 -RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHM 551
Query: 200 HVKQAQQFFD-QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYN 258
Q FD ++ +++I K A + F +++ D++ YN
Sbjct: 552 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 611
Query: 259 NFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
+ C +DEA IF + P+ T +I IH C ND+ A R+ M
Sbjct: 612 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 671
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
PN TY C++ K+ +E +++L +EM +G+ P SY+ I C V A
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Query: 379 LRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ + PD Y ++++ ++GR +A ++E
Sbjct: 732 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 771
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
T+ LI+G+ K G+ +A +LF+ M +G DL+AY+ +D K G + +F
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
L K V+ D +S I Y + D+ +A V +M + PNV TY +IK LC++ ++
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
EA+ + +++ RG++P +Y+++ C + L M K PD Y ++
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 401 LKLLIRIG 408
+ L + G
Sbjct: 468 VDGLSKQG 475
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 149/383 (38%), Gaps = 58/383 (15%)
Query: 94 GFSAHRFFLWAKSIPGFQHSVESFHILVEILG---------------SCKQFAILWDFLT 138
G SAH F L A G FH LV G S Q + L+
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLS 275
Query: 139 EMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKR 198
+ + N F + + + D A F M++ GI+P + + L+ K
Sbjct: 276 LVLDCGPAP-NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 199 KHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
+ + F QA + L +S I + K GD A +++ ML QG +++ Y
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
+ LC+ G + EA ++ +L + +EP TYS I +C ++ S F + + M +
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 318 CNLLP-----------------------------------NVFTYNCIIKRLCKNDKVEE 342
P NV +N +I C+ ++ +E
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 343 AYELLDEMILRGVKPDTWSYNAI------QAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
A ++ M + G+KPD ++ + + C H + + L+L M+++ D
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAV 574
Query: 397 YNMVLKLLIRIGRFDKATEVWEN 419
N+V+ LL + R + A++ + N
Sbjct: 575 CNVVIHLLFKCHRIEDASKFFNN 597
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 108/238 (45%), Gaps = 5/238 (2%)
Query: 133 LWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLL 192
L+D + + S+ + + + +FK + + A + F + E ++P I ++ ++
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIED----ASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 193 YFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCP 251
C + + +A++ F+ K + F T +ILI K D A +F M ++G
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 252 VDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRV 311
+ + Y +D K ++ + +F +M K + P +YSI I C + A +
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 312 LDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHH 369
+ LLP+V Y +I+ CK ++ EA L + M+ GVKPD A+ ++
Sbjct: 735 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYN 792
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 142/346 (41%), Gaps = 40/346 (11%)
Query: 96 SAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAIL--------------WDFLTEMR 141
SA ++F WA+ SF+ + +L F + ++ L +R
Sbjct: 85 SALKYFRWAE----ISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIR 140
Query: 142 ESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHV 201
+ S +++D+ F+ + R + D A+ F+ + G+ +L L V
Sbjct: 141 DRS---LDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRV 197
Query: 202 KQAQQFFDQAKSHFLLTAKTYSILISGWGKI-------GDSGKARELFQAMLDQGCPVDL 254
FD+ L +S G + G+ KA + + ++++G V +
Sbjct: 198 DLIADHFDK-----LCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGI 252
Query: 255 LAYNNFLDALCKGGCVDE---ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRV 311
++ N L KG VD+ A+ + +L P+ T+ I+ +C ++ AF +
Sbjct: 253 VSCNKVL----KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDL 308
Query: 312 LDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCD 371
M + + P++ Y+ +I K + ++L + + +GVK D +++ +
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368
Query: 372 HCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+++ A + RM P+ TY +++K L + GR +A ++
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 3/270 (1%)
Query: 150 SDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD 209
+DI+ + + ++R N D A F M ++ KP +D L+ + + A D
Sbjct: 143 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 210 QA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
++ + TY+ LI+ G G+ +A E+ + M D G DL+ +N L A G
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR--RCNLLPNVFT 326
+A + F M +V PD T++I I+ A + + MR R P+V T
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 322
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+ I+ ++E + + M+ G+KP+ SYNA+ + H AL ++ ++
Sbjct: 323 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
++ PD +Y +L R + KA EV
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 120/297 (40%), Gaps = 38/297 (12%)
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD---QA 211
+ AY A+ F M ++P F++++Y L K QA F+ +
Sbjct: 253 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 312
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
++ T++ ++ + G+ R +F+AM+ +G ++++YN + A G
Sbjct: 313 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 372
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
A ++ D+ + PD +Y+ +++Y + A V MR+ PNV TYN +I
Sbjct: 373 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 432
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKP---------------------------------- 357
N + EA E+ +M G+KP
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 492
Query: 358 -DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+T +YN+ + + E+ +A+ L M K D T+ +++ R+ ++ +A
Sbjct: 493 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 549
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 114/274 (41%), Gaps = 15/274 (5%)
Query: 121 VEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFG 180
+ +LG KQ I+ D + S C +NS Y R+ P A FL M +
Sbjct: 375 LSVLGDIKQNGIIPDVV-----SYTCLLNS---------YGRSRQPGKAKEVFLMMRKER 420
Query: 181 IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKAR 239
KP + ++ L+ + +A + F Q + + + L++ +
Sbjct: 421 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD 480
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
+ A +G ++ AYN+ + + +++A ++ M K+V+ D+ T++I I
Sbjct: 481 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 540
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
C + A L +M ++ Y+ ++ K +V EA + ++M + G +PD
Sbjct: 541 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 600
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
+Y ++ + + +A L ME + PD
Sbjct: 601 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPD 634
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 119/290 (41%), Gaps = 11/290 (3%)
Query: 135 DFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYF 194
D + +S +N+ + +Y A + AI + M + +K F +L+
Sbjct: 480 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 539
Query: 195 LCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVD 253
C+ +A + + + LT + YS ++ + K G +A +F M GC D
Sbjct: 540 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 599
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
++AY + L A +A +F +M + +EPD+ S + + + F ++D
Sbjct: 600 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 659
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
MR + FT + + ++E +D +++ + P S + + H
Sbjct: 660 LMREKEI---PFTGAVFFEIFSACNTLQEWKRAID--LIQMMDPYLPSLSIGLTNQMLHL 714
Query: 374 -----EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+V ++L ++ + TY ++L+ L+ +G + K EV E
Sbjct: 715 FGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLE 764
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 6/259 (2%)
Query: 166 PDGAIRSFLR----MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAK 220
PD +I + R M G++P D+ + LC+ V +A+ + + H
Sbjct: 136 PDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTY 195
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
TY+ L+ K D E M D DL+++ +D +C + EA +
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
+ + +PD F Y+ + +C + A V KM+ + P+ TYN +I L K +
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
VEEA L M+ G +PDT +Y ++ C E AL L+ ME C P+ TYN
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNT 375
Query: 400 VLKLLIRIGRFDKATEVWE 418
+L L + DK E++E
Sbjct: 376 LLHGLCKARLMDKGMELYE 394
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 119/286 (41%), Gaps = 36/286 (12%)
Query: 116 SFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLR 175
+++ L++ L CK ++++F+ EMR
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMR---------------------------------- 221
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGD 234
D+F +KP + F +L+ +C K++++A + + F Y+ ++ G+ +
Sbjct: 222 -DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
+A +++ M ++G D + YN + L K G V+EA M+ EPD TY+
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
++ C + A +L++M PN TYN ++ LCK +++ EL + M G
Sbjct: 341 LMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSG 400
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
VK ++ Y + +V+ A + D Y+ +
Sbjct: 401 VKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 2/238 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK--TYSILISGWGKIGDSGKARE 240
P + ++ LL LCK K + +F D+ + F + +++ILI + +A
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
L + + G D YN + C EA ++ M + VEPD TY+ I
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS 311
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
A + A L M P+ TY ++ +C+ + A LL+EM RG P+
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDC 371
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+YN + C + + + L M+ + + Y +++ L++ G+ +A EV++
Sbjct: 372 TYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFD 429
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 3/271 (1%)
Query: 150 SDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD 209
+DI+ + + ++R N D A F M ++ KP +D L+ + + A D
Sbjct: 11 NDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 210 QA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
++ + TY+ LI+ G G+ +A E+ + M D G DL+ +N L A G
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR--RCNLLPNVFT 326
+A + F M +V PD T++I I+ A + + MR R P+V T
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVT 190
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+ I+ ++E + + M+ G+KP+ SYNA+ + H AL ++ ++
Sbjct: 191 FTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 250
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
++ PD +Y +L R + KA EV+
Sbjct: 251 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 120/297 (40%), Gaps = 38/297 (12%)
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD---QA 211
+ AY A+ F M ++P F++++Y L K QA F+ +
Sbjct: 121 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 180
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
++ T++ ++ + G+ R +F+AM+ +G ++++YN + A G
Sbjct: 181 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 240
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
A ++ D+ + PD +Y+ +++Y + A V MR+ PNV TYN +I
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKP---------------------------------- 357
N + EA E+ +M G+KP
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 360
Query: 358 -DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+T +YN+ + + E+ +A+ L M K D T+ +++ R+ ++ +A
Sbjct: 361 LNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 417
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 114/274 (41%), Gaps = 15/274 (5%)
Query: 121 VEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFG 180
+ +LG KQ I+ D + S C +NS Y R+ P A FL M +
Sbjct: 243 LSVLGDIKQNGIIPDVV-----SYTCLLNS---------YGRSRQPGKAKEVFLMMRKER 288
Query: 181 IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKAR 239
KP + ++ L+ + +A + F Q + + + L++ +
Sbjct: 289 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD 348
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
+ A +G ++ AYN+ + + +++A ++ M K+V+ D+ T++I I
Sbjct: 349 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 408
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
C + A L +M ++ Y+ ++ K +V EA + ++M + G +PD
Sbjct: 409 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 468
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
+Y ++ + + +A L ME + PD
Sbjct: 469 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPD 502
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 120/290 (41%), Gaps = 11/290 (3%)
Query: 135 DFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYF 194
D + +S +N+ + +Y A + AI + M + +K F +L+
Sbjct: 348 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 407
Query: 195 LCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVD 253
C+ +A + + + + LT + YS ++ + K G +A +F M GC D
Sbjct: 408 SCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 467
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
++AY + L A +A +F +M + +EPD+ S + + + F ++D
Sbjct: 468 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 527
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
MR + FT + + ++E +D +++ + P S + + H
Sbjct: 528 LMREKEI---PFTGAVFFEIFSACNTLQEWKRAID--LIQMMDPYLPSLSIGLTNQMLHL 582
Query: 374 -----EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+V ++L ++ + TY ++L+ L+ +G + K EV E
Sbjct: 583 FGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLE 632
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 123/255 (48%), Gaps = 5/255 (1%)
Query: 168 GAIRSFLRMDE----FGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTY 222
G IR+ L + E G P + ++ ++ + + +QA +F+ DQ ++ TY
Sbjct: 188 GHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITY 247
Query: 223 SILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS 282
++L+ + S +A E+ + M +GC D++ YN+ ++ C+ G ++E ++ +LS
Sbjct: 248 TVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILS 307
Query: 283 KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEE 342
+E + TY+ +H+ C +L+ M + + P V TYN +I LCK +
Sbjct: 308 HGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSR 367
Query: 343 AYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
A + +M+ + PD +YN + V A+ L+ ++ C P TYN V+
Sbjct: 368 AIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 427
Query: 403 LLIRIGRFDKATEVW 417
L + G KA E++
Sbjct: 428 GLAKKGLMKKALELY 442
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 14/306 (4%)
Query: 116 SFHILVEIL----GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGA-- 169
++ +LVE++ GS + +L D E NS + + R NL + A
Sbjct: 246 TYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNY----NCRRGNLEEVASV 301
Query: 170 IRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAKTYSILISG 228
I+ L G++ ++ LL+ LC ++ + ++ + ++ + T TY+ILI+G
Sbjct: 302 IQHIL---SHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILING 358
Query: 229 WGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPD 288
K +A + F ML+Q C D++ YN L A+ K G VD+A + + + P
Sbjct: 359 LCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPG 418
Query: 289 AFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
TY+ I + A + +M + P+ T +I C+ + VEEA ++L
Sbjct: 419 LITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLK 478
Query: 349 EMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
E RG +Y + C E+ A+ ++ M C PD Y ++K + +G
Sbjct: 479 ETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Query: 409 RFDKAT 414
+A
Sbjct: 539 MGSEAV 544
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 35/231 (15%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TY+++I K G A L + M G P D++ YN + + G ++A + D
Sbjct: 176 TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQ 235
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
L P TY++ + C A VL+ M P++ TYN ++ C+ +
Sbjct: 236 LQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL 295
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDH---------------------------- 372
EE ++ ++ G++ +T +YN + C H
Sbjct: 296 EEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNIL 355
Query: 373 ----CE---VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
C+ +SRA+ +M + C PD TYN VL + + G D A E+
Sbjct: 356 INGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%)
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
+N + L + +D+A I M+ PD TY++ I C I +A +L+ M
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSL 202
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
P+V TYN +I+ + E+A + + G P +Y + C +C +R
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 378 ALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
A+ ++ M + C+PD TYN ++ R G ++ V +
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQ 303
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 1/227 (0%)
Query: 191 LLYFLCKRKHVKQAQQFFDQAKSHFLLTA-KTYSILISGWGKIGDSGKARELFQAMLDQG 249
+L+ LC + A + + H + + S L+ G +I KA + + M+ G
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 250 CPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAF 309
D + YN + LCK G + A + DM PD TY+ I D + A
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 310 RVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHH 369
R + P + TY +++ +C+ A E+L++M + G PD +YN++ ++
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYN 289
Query: 370 CDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
C + ++ + + TYN +L L +D+ E+
Sbjct: 290 CRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEI 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%)
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
N L LC G + +A + M P + S + + + A +L M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
+P+ TYN II LCK + A LL++M L G PD +YN + D+ +
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 378 ALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
A+R ++ C P TY ++++L+ R +A EV E+
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLED 269
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%)
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
E D T + +H C + A ++++ M R N +P+ + + +++ L + D++++A
Sbjct: 100 TENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAM 159
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+L M++ G PDT +YN I + C + AL L+ M PD TYN V++ +
Sbjct: 160 CILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCM 219
Query: 405 IRIGRFDKATEVWEN 419
G ++A W++
Sbjct: 220 FDYGNAEQAIRFWKD 234
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 4/256 (1%)
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT 218
+ + P+ AI+ + F ++P I + L +C + +A F + LL
Sbjct: 350 GFCKVGKPEEAIK---LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 219 -AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
Y+ +I G+ +G + KA + F A+L G P L + A + G + +A ++F
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+M ++ ++ D TY+ +H Y + ++ F ++D+MR + P+V TYN +I +
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
++EA E++ E+I RG P T ++ + + A L M PD T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 398 NMVLKLLIRIGRFDKA 413
+ +L + R +KA
Sbjct: 587 SALLHGYCKAQRMEKA 602
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 111/247 (44%), Gaps = 2/247 (0%)
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-L 217
Y D A + F + + G P++ +L+ + + A+ F K+ L L
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
TY+ L+ G+GK K EL M G D+ YN + ++ G +DEA I
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+++ + P ++ I + D AF + M + P+V T + ++ CK
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
++E+A L ++++ G+KPD YN + +C ++ +A L+ M + P+ T+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 398 N-MVLKL 403
+ +VL L
Sbjct: 657 HALVLGL 663
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 155/396 (39%), Gaps = 32/396 (8%)
Query: 48 DLVSEISRVVSDH---RHPHHDLELSLNQFSA-QISSDLVEQVLKRCKNLGFSAHRFFLW 103
D V I V+ H + L+Q++ +I DL E+ L L FF W
Sbjct: 81 DCVETIRNVLVKHNWIQKYESGFSTELDQYTVIRILDDLFEETLDASIVL-----YFFRW 135
Query: 104 AKSIPGFQHSVESFHILVEILGSCKQFAILWDFLT------EMRESSCCEINSD------ 151
++ G +HS S ++ IL S D L E S C + D
Sbjct: 136 SELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRI 195
Query: 152 -------IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
+F + R + A++ ++D+FGI P+ LL + + ++ A
Sbjct: 196 DRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELA 255
Query: 205 QQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA 263
++F + S L A S+ I + G K EL M G D++A+ F+D
Sbjct: 256 REFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDK 315
Query: 264 LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPN 323
LCK G + EAT++ + + D+ + S I +C A +++ R L PN
Sbjct: 316 LCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPN 372
Query: 324 VFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMS 383
+F Y+ + +C + A + E+ G+ PD Y + +C+ +A +
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 384 RMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ K P T +++ R G A V+ N
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 120/270 (44%), Gaps = 4/270 (1%)
Query: 148 INSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF 207
+N+ + + Y D + M +GI+P I F + + LCK +K+A
Sbjct: 269 LNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSV 328
Query: 208 FDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
+ K + + + S +I G+ K+G +A +L + + P ++ Y++FL +C
Sbjct: 329 LFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR--P-NIFVYSSFLSNICS 385
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
G + A+ IF ++ + PD Y+ I YC+ AF+ + + P++ T
Sbjct: 386 TGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+I + + +A + M G+K D +YN + + ++++ L+ M
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
PD TYN+++ ++ G D+A E+
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEI 535
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 1/245 (0%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGK 231
F + E G+ P + ++ C +A Q+F KS + T +ILI +
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR 455
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
G A +F+ M +G +D++ YNN + K +++ + +M S + PD T
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVAT 515
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
Y+I IH+ I A ++ ++ R +P+ + +I K +EA+ L M
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
+KPD + +A+ +C + +A+ L +++ PD YN ++ +G +
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 412 KATEV 416
KA E+
Sbjct: 636 KACEL 640
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 4/256 (1%)
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT 218
+ + P+ AI+ + F ++P I + L +C + +A F + LL
Sbjct: 350 GFCKVGKPEEAIK---LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 219 -AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
Y+ +I G+ +G + KA + F A+L G P L + A + G + +A ++F
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+M ++ ++ D TY+ +H Y + ++ F ++D+MR + P+V TYN +I +
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
++EA E++ E+I RG P T ++ + + A L M PD T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTC 586
Query: 398 NMVLKLLIRIGRFDKA 413
+ +L + R +KA
Sbjct: 587 SALLHGYCKAQRMEKA 602
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 111/247 (44%), Gaps = 2/247 (0%)
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-L 217
Y D A + F + + G P++ +L+ + + A+ F K+ L L
Sbjct: 417 GYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
TY+ L+ G+GK K EL M G D+ YN + ++ G +DEA I
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+++ + P ++ I + D AF + M + P+V T + ++ CK
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
++E+A L ++++ G+KPD YN + +C ++ +A L+ M + P+ T+
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 398 N-MVLKL 403
+ +VL L
Sbjct: 657 HALVLGL 663
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 155/396 (39%), Gaps = 32/396 (8%)
Query: 48 DLVSEISRVVSDH---RHPHHDLELSLNQFSA-QISSDLVEQVLKRCKNLGFSAHRFFLW 103
D V I V+ H + L+Q++ +I DL E+ L L FF W
Sbjct: 81 DCVETIRNVLVKHNWIQKYESGFSTELDQYTVIRILDDLFEETLDASIVL-----YFFRW 135
Query: 104 AKSIPGFQHSVESFHILVEILGSCKQFAILWDFLT------EMRESSCCEINSD------ 151
++ G +HS S ++ IL S D L E S C + D
Sbjct: 136 SELWIGVEHSSRSISRMIHILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRI 195
Query: 152 -------IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
+F + R + A++ ++D+FGI P+ LL + + ++ A
Sbjct: 196 DRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELA 255
Query: 205 QQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA 263
++F + S L A S+ I + G K EL M G D++A+ F+D
Sbjct: 256 REFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDK 315
Query: 264 LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPN 323
LCK G + EAT++ + + D+ + S I +C A +++ R L PN
Sbjct: 316 LCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPN 372
Query: 324 VFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMS 383
+F Y+ + +C + A + E+ G+ PD Y + +C+ +A +
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 384 RMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ K P T +++ R G A V+ N
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 120/270 (44%), Gaps = 4/270 (1%)
Query: 148 INSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF 207
+N+ + + Y D + M +GI+P I F + + LCK +K+A
Sbjct: 269 LNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSV 328
Query: 208 FDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
+ K + + + S +I G+ K+G +A +L + + P ++ Y++FL +C
Sbjct: 329 LFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR--P-NIFVYSSFLSNICS 385
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
G + A+ IF ++ + PD Y+ I YC+ AF+ + + P++ T
Sbjct: 386 TGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+I + + +A + M G+K D +YN + + ++++ L+ M
Sbjct: 446 STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
PD TYN+++ ++ G D+A E+
Sbjct: 506 SAGISPDVATYNILIHSMVVRGYIDEANEI 535
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 1/245 (0%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGK 231
F + E G+ P + ++ C +A Q+F KS + T +ILI +
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR 455
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
G A +F+ M +G +D++ YNN + K +++ + +M S + PD T
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVAT 515
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
Y+I IH+ I A ++ ++ R +P+ + +I K +EA+ L M
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
+KPD + +A+ +C + +A+ L +++ PD YN ++ +G +
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 412 KATEV 416
KA E+
Sbjct: 636 KACEL 640
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 146/343 (42%), Gaps = 3/343 (0%)
Query: 77 QISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDF 136
+++ +V +VLK + +A +FF WA G++H +++ L F D
Sbjct: 122 RVTPSIVAEVLKLGNDAAVAA-KFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAA-DQ 179
Query: 137 LTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLC 196
L E+ +S + F + + ++ + +M +FG KP + ++ ++ L
Sbjct: 180 LPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALV 239
Query: 197 KRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLL 255
K + A ++ K L+ + T+ IL+ G K G + E+ Q M + C D+
Sbjct: 240 KNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVF 299
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
AY + L G +D + ++ +M ++PD Y + C + + + +M
Sbjct: 300 AYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEM 359
Query: 316 RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEV 375
+ +L + Y +I+ + KV A L ++++ G D YNA+ C +V
Sbjct: 360 KGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQV 419
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+A +L ++ PD T + ++ + + R + V E
Sbjct: 420 DKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLE 462
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 141/341 (41%), Gaps = 42/341 (12%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF---IFKAYSRANL 165
G +F ILV+ L + + + L MRE+ C D+F + I S NL
Sbjct: 258 GLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLC---KPDVFAYTAMIKTLVSEGNL 314
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSI 224
D ++R + M IKP + + L+ LCK V++ + F + K L+ + Y +
Sbjct: 315 -DASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRV 373
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI G+ G A L++ ++D G D+ YN + LC VD+A +F + +
Sbjct: 374 LIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE 433
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKM----------------------RRCNLLP 322
+EPD T S + Y N + VL+++ + +
Sbjct: 434 LEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMAL 493
Query: 323 NVF------------TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
+VF YN +++ L K ++++ L EM G +PD+ SY+
Sbjct: 494 DVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFV 553
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
+ +V A ++ + +C P Y + K L +IG D
Sbjct: 554 EKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEID 594
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 4/238 (1%)
Query: 186 HDF---DMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKAREL 241
HDF + Y L + H + A Q + S + K + ILI + +
Sbjct: 156 HDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYV 215
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
++ M G + YN +DAL K G D A ++ D + ++ T+ I + C
Sbjct: 216 YEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCK 275
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
A I +L +MR P+VF Y +IK L ++ + + DEM +KPD +
Sbjct: 276 AGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMA 335
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
Y + C V R L M+ DR Y ++++ + G+ A +WE+
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWED 393
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Query: 257 YNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR 316
YN ++AL K G + ++ ++F++M EPD+ +YSI I + + D+ +A +K+
Sbjct: 510 YNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKII 569
Query: 317 RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK--PDTWSYNAIQAHHCDHCE 374
+ +P++ Y + K LC+ ++ +A LL L V+ P + Y H C
Sbjct: 570 EMSCVPSIAAYLSLTKGLCQIGEI-DAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSN 628
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ ++++ M ++ F + Y ++ + + G A EV+
Sbjct: 629 AEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVF 671
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 184 TIHDFDMLLYFLCKRKHVKQAQQ-FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELF 242
++ +++L+ L K ++++ F++ K F + +YSI I + + GD A
Sbjct: 506 SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFH 565
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK-RVEPDAFTYSIFIHTYCD 301
+ +++ C + AY + LC+ G +D + + L P F Y++ + C
Sbjct: 566 EKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCK 625
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
++ +V+D+M + + N Y II + K+ ++ A E+ E+ R V
Sbjct: 626 GSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKV 679
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 15/285 (5%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILG-SCKQFAI--LWDFLTEMRESSCCEINSDIF 153
A F W KS ++ +V ++I++ ILG +CK + LWD EM INS +
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWD---EMIRKGIKPINS-TY 225
Query: 154 WFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF----- 208
+ YS+ L A+ +M + G++P ++L K + ++A++FF
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSC 285
Query: 209 --DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
++A SH L++ TY+ +I +GK G +A E F+ ML++G + +N +
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
G + E T++ M PD TY+I I + NDI A +M+ L P+ +
Sbjct: 346 NGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVS 404
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCD 371
Y ++ VEEA L+ EM V+ D ++ +A+ + +
Sbjct: 405 YRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVE 449
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 137/367 (37%), Gaps = 45/367 (12%)
Query: 94 GFSAHRF-FLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSD- 151
G H +L S G Q + I++++ ++F +F ++ SC E +D
Sbjct: 236 GLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFF---KKWSCDENKADS 292
Query: 152 -------IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
+ + Y ++ A +F RM E GI PT F+ +++ + +
Sbjct: 293 HVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEV 352
Query: 205 QQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
K H +TY+ILIS K D +A F+ M D G D ++Y L A
Sbjct: 353 TSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAF 412
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSA------FRVLDKMRRC 318
V+EA + +M VE D +T S Y +A + + F V M
Sbjct: 413 SIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE 472
Query: 319 NLLPN---------------------------VFTYNCIIKRLCKNDKVEEAYELLDEMI 351
N V YN +IK + E+A EL + M+
Sbjct: 473 GYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMM 532
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
GV PD +YN + + + +M + D Y V+ +++G+ +
Sbjct: 533 SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLN 592
Query: 412 KATEVWE 418
A EV++
Sbjct: 593 MAEEVYK 599
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 116/262 (44%), Gaps = 6/262 (2%)
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT 218
AY A R F+ E K T+ ++++++ K ++A + F+ S+ +
Sbjct: 480 AYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTP 538
Query: 219 AK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
K TY+ L+ K R + M + G D + Y + + K G ++ A ++
Sbjct: 539 DKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+M+ +EPD Y + I+ + D ++ A ++ M+ + N YN +IK K
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 338 ---DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
D+ E Y L + + PD ++ N + + + V +A + M K +
Sbjct: 659 GYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM-KQRGEANE 717
Query: 395 HTYNMVLKLLIRIGRFDKATEV 416
T+ M+L + + GRF++AT++
Sbjct: 718 FTFAMMLCMYKKNGRFEEATQI 739
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 138/344 (40%), Gaps = 38/344 (11%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + +F+ ++ I G+ Q + + M+ C ++ + + +++ N +
Sbjct: 328 GIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH--CAPDTRTYNILISLHTKNNDIER 385
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQ----------------------- 205
A F M + G+KP + LLY R V++A+
Sbjct: 386 AGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTR 445
Query: 206 -----QFFDQAKSHFL-------LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVD 253
+ +++ S F ++++ YS I +G+ G +A +F +
Sbjct: 446 MYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRT 504
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
++ YN + A ++A +F M+S V PD TY+ + A+ H L+
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
KMR + + Y +I K ++ A E+ EM+ ++PD Y + D
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 374 EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
V +A+ + M++ + YN ++KL ++G D+A ++
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIY 668
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 123/281 (43%), Gaps = 8/281 (2%)
Query: 145 CCEINSDI---FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHV 201
C E+N + + KAY + + A F M +G+ P ++ L+ L
Sbjct: 497 CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMP 556
Query: 202 KQAQQFFDQAK-SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNF 260
+ + + ++ + + ++ Y +IS + K+G A E+++ M++ D++ Y
Sbjct: 557 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 616
Query: 261 LDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM-RRCN 319
++A G V +A + M + ++ Y+ I Y + A + K+ + CN
Sbjct: 617 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 676
Query: 320 LL--PNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
P+V+T NC+I + V +A + D M RG + + +++ + + +
Sbjct: 677 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEE 735
Query: 378 ALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
A ++ +M + D +YN VL L GRF +A E ++
Sbjct: 736 ATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFK 776
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 133/300 (44%), Gaps = 12/300 (4%)
Query: 116 SFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSF 173
+++ LV+IL S +L +MRE+ SD + + ++ + + A +
Sbjct: 542 TYNTLVQILASADMPHKGRCYLEKMRETGYV---SDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 174 LRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKI 232
M E+ I+P + + +L+ +V+QA + + K + + Y+ LI + K+
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 233 GDSGKARELFQAMLDQGCPV----DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPD 288
G +A +++ +L Q C D+ N ++ + V +A IF D + +R E +
Sbjct: 659 GYLDEAEAIYRKLL-QSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIF-DSMKQRGEAN 716
Query: 289 AFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
FT+++ + Y A ++ +MR +L + +YN ++ + + +EA E
Sbjct: 717 EFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFK 776
Query: 349 EMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
EM+ G++PD ++ ++ +A+R + + K + L L+ IG
Sbjct: 777 EMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIG 836
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 9/228 (3%)
Query: 194 FLCKRKHVKQAQQFFD--QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCP 251
L ++ H ++A + F+ ++K + L Y+I++ GK + L+ M+ +G
Sbjct: 160 ILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIK 219
Query: 252 VDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRV 311
Y +D KGG A M ++PD T I + Y A + A
Sbjct: 220 PINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEF 279
Query: 312 LDK------MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
K ++ + +TYN +I K+ +++EA E M+ G+ P T ++N +
Sbjct: 280 FKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTM 339
Query: 366 QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+ ++ ++ LM M K +C PD TYN+++ L + ++A
Sbjct: 340 IHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERA 386
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 111/218 (50%), Gaps = 10/218 (4%)
Query: 199 KHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSG--KARELFQAMLDQGCPVDLLA 256
+H+ ++Q F +S FL IL+S + DS + M++ G D +
Sbjct: 109 QHILKSQPNFRPGRSTFL-------ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVT 161
Query: 257 YNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR 316
+ + +LC+ G VDEA ++ ++ K PD +TY+ + C D+H + +D+MR
Sbjct: 162 TDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMR 221
Query: 317 R-CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEV 375
++ P++ ++ +I +C + + EA L+ ++ G KPD + YN I C +
Sbjct: 222 DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG 281
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
S A+ + +M+++ PD+ TYN ++ L + GR ++A
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 6/211 (2%)
Query: 166 PDGAIRSFLR----MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAK 220
PD +I + R M G++P D+ + LC+ V +A+ + + H
Sbjct: 136 PDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTY 195
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
TY+ L+ K D E M D DL+++ +D +C + EA +
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
+ + +PD F Y+ + +C + A V KM+ + P+ TYN +I L K +
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
VEEA L M+ G +PDT +Y ++ C
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 2/156 (1%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK--TYSILISGWGKIGDSGKARE 240
P + ++ LL LCK K + +F D+ + F + +++ILI + +A
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
L + + G D YN + C EA ++ M + VEPD TY+ I
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS 311
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
A + A L M P+ TY ++ +C+
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Query: 116 SFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF---IFKAYSRANLPDGAIRS 172
+++ L++ L CK ++++F+ EMR+ ++ D+ F I + NL + A+
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMRDD--FDVKPDLVSFTILIDNVCNSKNLRE-AMYL 252
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGK 231
++ G KP ++ ++ C +A + + K + + TY+ LI G K
Sbjct: 253 VSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSK 312
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
G +AR + M+D G D Y + ++ +C+ G
Sbjct: 313 AGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 142/322 (44%), Gaps = 17/322 (5%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + S+ S+ L+ + KQ+ + ++E+ E S +++S F + A+S + +
Sbjct: 75 GHRPSLISYTTLLAAMTVQKQYGSISSIVSEV-EQSGTKLDSIFFNAVINAFSESGNMED 133
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD----QAKSHFLLTAKTYSI 224
A+++ L+M E G+ PT ++ L+ +++ + D + +T+++
Sbjct: 134 AVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNV 193
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC---KGGCVDEATNIFHDML 281
L+ W K +A E+ + M + G D + YN A C KG V + + M+
Sbjct: 194 LVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRAESEVVEKMV 251
Query: 282 SK-RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK---RLCKN 337
K + +P+ T I + YC + R + +M+ + N+ +N +I +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
D ++E L+ E VK D +Y+ + + +A ++ M K PD H Y
Sbjct: 312 DGIDEVLTLMKEC---NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 368
Query: 398 NMVLKLLIRIGRFDKATEVWEN 419
+++ K +R KA E+ E
Sbjct: 369 SILAKGYVRAKEPKKAEELLET 390
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 126/291 (43%), Gaps = 11/291 (3%)
Query: 113 SVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRAN---LPD 167
++ +F++LV+ K+ W+ + +M E C + D + I Y + +
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEE---CGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILI 226
+ + M E KP +++ C+ V+ +F + K + ++ LI
Sbjct: 244 SEVVEKMVMKEKA-KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
+G+ ++ D E+ M + D++ Y+ ++A G +++A +F +M+ V+
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
PDA YSI Y A + A +L+ + PNV + +I C N +++A +
Sbjct: 363 PDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSNGSMDDAMRV 421
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
++M GV P+ ++ + + + + +A ++ M P+ T+
Sbjct: 422 FNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 4/190 (2%)
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
G +A+ +F+ + + G L++Y L A+ ++I ++ + D+ +
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFF 118
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
+ I+ + ++ ++ A + L KM+ L P TYN +IK K E + ELLD M+
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 353 RG---VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGR 409
G V P+ ++N + C +V A ++ +ME+ PD TYN + ++ G
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 410 FDKA-TEVWE 418
+A +EV E
Sbjct: 239 TVRAESEVVE 248
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%)
Query: 211 AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
+SH + ++ K G+ A+ LF M ++G ++L YN +D+ C G
Sbjct: 2 GQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRW 61
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
+A + M+ K++ PD T+S I+ + + A + +M R ++ P TYN +
Sbjct: 62 SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
I CK D+V++A +LD M +G PD +++ + +C V + + M +
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 391 FPDRHTYNMVLKLLIRIGRFDKATEV 416
+ TY ++ ++G D A ++
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDL 207
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 1/216 (0%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGK 231
F M E GI P + ++ ++ C A Q + T+S LI+ + K
Sbjct: 33 FTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVK 92
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
+A E+++ ML + YN+ +D CK VD+A + M SK PD T
Sbjct: 93 ERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT 152
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
+S I+ YC A + + + +M R ++ N TY +I C+ ++ A +LL+EMI
Sbjct: 153 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
GV PD +++ + A C E+ +A ++ ++K
Sbjct: 213 SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 1/226 (0%)
Query: 195 LCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVD 253
LCK + AQ F + + TY+ +I + G A +L + M+++ D
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
++ ++ ++A K V EA I+ +ML + P TY+ I +C + + A R+LD
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
M P+V T++ +I CK +V+ E+ EM RG+ +T +Y + C
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 199
Query: 374 EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
++ A L++ M PD T++ +L L KA + E+
Sbjct: 200 DLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%)
Query: 252 VDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRV 311
D++ +D LCK G A N+F +M K + P+ TY+ I ++C + A ++
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 312 LDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCD 371
L M + P++ T++ +I K KV EA E+ EM+ + P T +YN++ C
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 372 HCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
V A R++ M C PD T++ ++ + R D E++
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 173
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 90/206 (43%), Gaps = 36/206 (17%)
Query: 147 EINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
+IN DI F + A+ + A + M + I PT ++ ++ CK+ V A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 205 QQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
++ D +M +GC D++ ++ ++
Sbjct: 135 KRMLD----------------------------------SMASKGCSPDVVTFSTLINGY 160
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
CK VD IF +M + + + TY+ IH +C D+ +A +L++M C + P+
Sbjct: 161 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY 220
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEM 350
T++C++ LC ++ +A+ +L+++
Sbjct: 221 ITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%)
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
M ++ D + + C + +A + +M + PNV TYNC+I C + +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
+A +LL MI + + PD +++A+ +VS A + M + + FP TYN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 400 VLKLLIRIGRFDKATEVWEN 419
++ + R D A + ++
Sbjct: 121 MIDGFCKQDRVDDAKRMLDS 140
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 128/268 (47%), Gaps = 3/268 (1%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMD-EFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA 211
F +FK ++ ++R F M + KP H + +++ L + + + + FD+
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 212 KSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
S + + +Y+ LI+ +G+ G + EL M ++ +L YN ++A +GG
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 271 DEAT-NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNC 329
E +F +M + ++PD TY+ + A V M ++P++ TY+
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 330 IIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN 389
+++ K ++E+ +LL EM G PD SYN + + + A+ + +M+
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 390 CFPDRHTYNMVLKLLIRIGRFDKATEVW 417
C P+ +TY+++L L + GR+D +++
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%), Gaps = 9/310 (2%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLP 166
G SV S+ L+ G ++ + L M+ +I+ I + + A +R L
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE---KISPSILTYNTVINACARGGLD 227
Query: 167 -DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSI 224
+G + F M GI+P I ++ LL R +A+ F ++ TYS
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
L+ +GK+ K +L M G D+ +YN L+A K G + EA +FH M +
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
P+A TYS+ ++ + + ++ +M+ N P+ TYN +I+ + +E
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEV-SRALRLMSRMEKDNCFPDRHTYNMVLKL 403
L +M+ ++PD +Y I C + A +++ M ++ P Y V++
Sbjct: 408 TLFHDMVEENIEPDMETYEGI-IFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEA 466
Query: 404 LIRIGRFDKA 413
+ +++A
Sbjct: 467 FGQAALYEEA 476
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 3/244 (1%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGD 234
M G P I +++LL K +K+A F Q ++ A TYS+L++ +G+ G
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
R+LF M D YN ++ +GG E +FHDM+ + +EPD TY
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 295 FIHTYCDANDIHS-AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I C +H A ++L M +++P+ Y +I+ + EEA + M
Sbjct: 428 IIFA-CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEV 486
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
G P +++++ V + ++SR+ +R T+N ++ + G+F++A
Sbjct: 487 GSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Query: 414 TEVW 417
+ +
Sbjct: 547 VKTY 550
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 119/280 (42%), Gaps = 2/280 (0%)
Query: 140 MRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRK 199
M+ C+ N I+ + R L D + F M G+ ++ + L+ +
Sbjct: 131 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 190
Query: 200 HVKQAQQFFDQAKSHFLLTA-KTYSILISGWGKIG-DSGKARELFQAMLDQGCPVDLLAY 257
+ + + D+ K+ + + TY+ +I+ + G D LF M +G D++ Y
Sbjct: 191 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 250
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
N L A G DEA +F M + PD TYS + T+ + +L +M
Sbjct: 251 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 310
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
LP++ +YN +++ K+ ++EA + +M G P+ +Y+ +
Sbjct: 311 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 378 ALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+L M+ N PD TYN+++++ G F + ++
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 129/322 (40%), Gaps = 49/322 (15%)
Query: 110 FQHSVESFHILVE------------ILGSCKQFAILWDFLTEMRESSCCEI--NSDIFWF 155
F+ V FH +VE I+ +C + + D ++ + +I +S +
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG 462
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
+ +A+ +A L + A+ +F M E G P+I F LLY + VK+++ +
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSR----- 517
Query: 216 LLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
++D G P + +N ++A +GG +EA
Sbjct: 518 -----------------------------LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVK 548
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
+ DM R +PD T + Y A + ++M+ ++LP++ Y ++
Sbjct: 549 TYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYG 608
Query: 336 KNDKVEEAYELLDEMILRGVKPDTWSYNA-IQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
K ++ ++ ELL+EM+ V I+ + D ++ ++ + C
Sbjct: 609 KTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGI 668
Query: 395 HTYNMVLKLLIRIGRFDKATEV 416
YN +L L +G+ ++A V
Sbjct: 669 RFYNALLDALWWLGQKERAARV 690
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/306 (18%), Positives = 118/306 (38%), Gaps = 2/306 (0%)
Query: 114 VESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSF 173
+ S+++L+E +M+ + C N++ + + + ++ D + F
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP-NANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 174 LRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKI 232
L M P +++L+ + + K+ F D + + +TY +I GK
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
G AR++ Q M AY ++A + +EA F+ M P T+
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
++++ + + +L ++ + N T+N I+ + K EEA + +M
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
PD + A+ + + V M+ + P Y M+L + + R+D
Sbjct: 556 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDD 615
Query: 413 ATEVWE 418
E+ E
Sbjct: 616 VNELLE 621
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 164/370 (44%), Gaps = 9/370 (2%)
Query: 58 SDHRHPHHDLELSLNQFS--AQISSDLVEQVLKR---CKNLGFSAHRFFLWAKSIPGFQH 112
+ H P+H ++ L + + +S + V +VL R + G A FF ++
Sbjct: 42 NGHPFPNHPIQPILAKHIPLSSLSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSP 101
Query: 113 SVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRS 172
+ +SF + IL + F W + E+R+ ++ + ++ + + +
Sbjct: 102 TSDSFEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEA 161
Query: 173 FLRMDE--FGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWG 230
F++M++ F K + +F++LL C + +K+A+ F++ S F KT +IL+ G+
Sbjct: 162 FVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFK 221
Query: 231 KIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAF 290
+ GD + M+ +G + + Y +D CK EA +F DM +
Sbjct: 222 EAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQ 281
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
+ IH A + A ++ D++ + L P+ YN ++ L K V A +++ EM
Sbjct: 282 ILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEM 341
Query: 351 ILRGVKPDTWSYNA--IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
+G++PD+ ++++ I + +M++ + P T M++KL G
Sbjct: 342 EEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNG 401
Query: 409 RFDKATEVWE 418
+ ++W+
Sbjct: 402 EVNLGLDLWK 411
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 3/198 (1%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGD 234
M + G KP + + + CK+++ +A + F D + F +T + + LI G G +
Sbjct: 236 MVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARN 295
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY-S 293
KAR+LF + +G D AYN + +L K G V A + +M K +EPD+ T+ S
Sbjct: 296 KIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHS 355
Query: 294 IFIHTYCDAN-DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
+FI + KM+ +L+P T ++K C N +V +L M+
Sbjct: 356 MFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLE 415
Query: 353 RGVKPDTWSYNAIQAHHC 370
+G P + + C
Sbjct: 416 KGYCPHGHALELLTTALC 433
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 134/315 (42%), Gaps = 6/315 (1%)
Query: 100 FFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKA 159
FF W + H +F +V ++ + D + E + S CEI +F + +
Sbjct: 58 FFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEI 117
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTA 219
+ R ++ D AI + M FG P +M++ K V A + F+ + +
Sbjct: 118 FWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFS- 176
Query: 220 KTYSILISGW---GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNI 276
+ I +S + G GD + + + M+ +G + + L C+ GCV EA +
Sbjct: 177 --FDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQV 234
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
M+ + +S+ + + + + A + +KM + PN+ TY +IK
Sbjct: 235 VGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVD 294
Query: 337 NDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
V+EA+ +L ++ G+ PD N + + A ++ + +EK PD++T
Sbjct: 295 LGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYT 354
Query: 397 YNMVLKLLIRIGRFD 411
+ +L L G+FD
Sbjct: 355 FASILSSLCLSGKFD 369
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 14/250 (5%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD-QAKSHFLLTAKTYSILISGWGKIG 233
RM G P F +L C+ V +A Q S ++ +S+L+SG+ + G
Sbjct: 202 RMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSG 261
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
+ KA +LF M+ GC +L+ Y + + G VDEA + + S+ + PD +
Sbjct: 262 EPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCN 321
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
+ IHTY A +V + + L+P+ +T+ I+ LC + K + L I
Sbjct: 322 LMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFD-----LVPRITH 376
Query: 354 GVKPDTWSYNAIQAHHCDHC-----EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
G+ D ++ + + +C S AL+++S M + D +TY + L L R G
Sbjct: 377 GIGTD---FDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGG 433
Query: 409 RFDKATEVWE 418
A ++++
Sbjct: 434 APRAAIKMYK 443
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 9/264 (3%)
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT 218
Y+R + A + F +++ + P + F +L LC + + F L
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLV 385
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
T ++L + + KIG + A ++ M + +D Y +L ALC+GG A ++
Sbjct: 386 --TGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYK 443
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLP---NVFTYNCIIKRLC 335
++ ++ DA +S I + + ++A + +RC L +V +Y IK L
Sbjct: 444 IIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLF---KRCILEKYPLDVVSYTVAIKGLV 500
Query: 336 KNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRH 395
+ ++EEAY L +M G+ P+ +Y I + C E + +++ ++ D +
Sbjct: 501 RAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPN 560
Query: 396 TYNMVLKLLIRI-GRFDKATEVWE 418
T V LL R G F + V+E
Sbjct: 561 TKFQVYSLLSRYRGDFSEFRSVFE 584
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%)
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILI 226
GA R M G+KP ++ +++ LCK +A Q ++ F + TY +L+
Sbjct: 325 GAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLM 384
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
K D+GKAR + + ML + YN +L LC E N+ ML
Sbjct: 385 ESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCR 444
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNL-LPNVFTYNCIIKRLCKNDKVEEAYE 345
PD +T + I+ C + A +VLD M P+ T N ++ L + EEA +
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 346 LLDEMILRG-VKPDTWSYNAI-----QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
+L+ ++ +KP +YNA+ + H D A+ + ++EK + D TY +
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDE-----AMSVFGQLEKASVTADSTTYAI 559
Query: 400 VLKLLIRIGRFDKATEVWEN 419
++ L + D A + W++
Sbjct: 560 IIDGLCVTNKVDMAKKFWDD 579
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 41/285 (14%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILISGWGKIGD 234
M G P + F L+ C+ + ++ A + FD+ + + T S+LI G+ K+ D
Sbjct: 188 MRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRD 247
Query: 235 SGKAREL--------------------FQAMLDQGC-------------------PVDL- 254
R+L F ++D C V++
Sbjct: 248 VETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVE 307
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
AY + +D+LC+ A I + M SK ++P +Y+ IH C A+++L++
Sbjct: 308 FAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE 367
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
P+ +TY +++ LCK +A +L+ M+ + T YN C
Sbjct: 368 GSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDN 427
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ L ++ M + +C PD +T N V+ L ++GR D A +V ++
Sbjct: 428 PTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDD 472
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
Y+ +I G K+ +A +F + D Y +D LC VD A + D+
Sbjct: 521 AYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDV 580
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ DAF Y+ F+ C + + A L + +PNV YN +I ++
Sbjct: 581 IWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLK 640
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHH 369
EAY++L+EM G PD ++ + H
Sbjct: 641 REAYQILEEMRKNGQAPDAVTWRILDKLH 669
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 33/203 (16%)
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSIL 225
PD A+R + G +P + +++ LC FD+A FLL L
Sbjct: 71 PDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGR-------FDEAHRRFLL------FL 117
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLA------------------YNNFLDALCKG 267
SG+ I D + +L PV L YN ++ LC
Sbjct: 118 ASGF--IPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTI 175
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
V +A + DM ++ PD T++ I YC+ ++ A +V D+MR C + PN T
Sbjct: 176 YRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTL 235
Query: 328 NCIIKRLCKNDKVEEAYELLDEM 350
+ +I K VE +L+ E+
Sbjct: 236 SVLIGGFLKMRDVETGRKLMKEL 258
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 5/248 (2%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK----TYSILISGWGK 231
M FG +P + ++ L+ C+ ++ A + ++ K +++ L +G+ K
Sbjct: 82 MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK 141
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
+ + ML + C +++ Y+ ++D CK G + A FH M + P+ T
Sbjct: 142 MKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVT 200
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
++ I YC A D+ A + +MRR + NV TY +I CK +++ A E+ M+
Sbjct: 201 FTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMV 260
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
V+P++ Y I + A++ +++M D Y +++ L G+
Sbjct: 261 EDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK 320
Query: 412 KATEVWEN 419
+ATE+ E+
Sbjct: 321 EATEIVED 328
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 120/301 (39%), Gaps = 31/301 (10%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
N F + Y +A + A+ + M + + + L+ CK+ +++A++ +
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256
Query: 209 DQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
+ + + Y+ +I G+ + GDS A + ML+QG +D+ AY + LC
Sbjct: 257 SRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGN 316
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT- 326
G + EAT I DM + PD ++ ++ Y + + +A + K+ P+V
Sbjct: 317 GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 327 -----------------------------YNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
Y +I LCK E L ++ G+ P
Sbjct: 377 STMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
D + Y + A C + A +L +RM ++ D Y ++ L G +A +V+
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVF 496
Query: 418 E 418
+
Sbjct: 497 D 497
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKAREL 241
P + + + CK ++ A + F K L T++ LI G+ K GD A L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
++ M ++++ Y +D CK G + A ++ M+ RVEP++ Y+ I +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
D +A + L KM + ++ Y II LC N K++EA E++++M + PD
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
+ + + + A+ + ++ + PD + ++ + + G+ +A
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 99/222 (44%), Gaps = 1/222 (0%)
Query: 145 CCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
CC N + + ++ A++SF M + P + F L+ CK ++ A
Sbjct: 158 CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 205 QQFFDQAKS-HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA 263
+ + + L TY+ LI G+ K G+ +A E++ M++ + L Y +D
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 264 LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPN 323
+ G D A ML++ + D Y + I C + A +++ M + +L+P+
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 324 VFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
+ + ++ K+ +++ A + ++I RG +PD + + +
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM 379
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 120/271 (44%), Gaps = 6/271 (2%)
Query: 147 EINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQ 206
E NS ++ I + + D A++ +M G++ I + +++ LC +K+A +
Sbjct: 265 EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATE 324
Query: 207 FF-DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
D KS + ++ +++ + K G A ++ ++++G D++A + +D +
Sbjct: 325 IVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIA 384
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVF 325
K G + EA I + + K + Y++ I C D R+ K+ L+P+ F
Sbjct: 385 KNGQLHEA--IVYFCIEK---ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKF 439
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM 385
Y I LCK + +A++L M+ G+ D +Y + + A ++ M
Sbjct: 440 MYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEM 499
Query: 386 EKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
PD ++++++ + G A+++
Sbjct: 500 LNSGISPDSAVFDLLIRAYEKEGNMAAASDL 530
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 101/236 (42%)
Query: 182 KPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKAREL 241
KP I F+ L K K + + + TYS I + K G+ A +
Sbjct: 126 KPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F +M +++ + +D CK G ++ A +++ +M R+ + TY+ I +C
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
++ A + +M + PN Y II + + A + L +M+ +G++ D +
Sbjct: 246 KGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITA 305
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
Y I + C + ++ A ++ MEK + PD + ++ + GR A ++
Sbjct: 306 YGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH-- 278
+++ ++S K+G A ++ +M GC D+++YN+ +D C+ G + A+ +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 279 ----------DMLS-------------------------KRVEPDAFTYSIFIHTYCDAN 303
D++S K P+ TYS +I T+C +
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 304 DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYN 363
++ A + M+R L PNV T+ C+I CK +E A L EM + + +Y
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 364 AIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
A+ C E+ RA + SRM +D P+ Y ++ + G D A +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAML 246
+ +L+ LCK + ++ F + L+ K Y+ I+G K G+ A +L M+
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
+G +DLLAY + L G + EA +F +ML+ + PD+ + + I Y ++
Sbjct: 466 QEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMA 525
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
+A +L M+R L+ V +C + C N+
Sbjct: 526 AASDLLLDMQRRGLVTAVSDADC--SKQCGNE 555
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
++N+ + +CK G V A +I H M EPD +Y+ I +C DI SA VL+ +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 316 RRCNLL---PNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
R + P++ ++N + K ++E + + M L+ P+ +Y+ C
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKS 176
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
E+ AL+ M++D P+ T+ ++ + G + A +++
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYK 222
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 115/233 (49%), Gaps = 2/233 (0%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQ--AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAM 245
++ ++ LCK +A++ + + ++ +Y+ +I G+ K+GD+ A E ++ M
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 246 LDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDI 305
+ G +++ + + ++ CK +D A + H+M S ++ D Y I +C ND+
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 306 HSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
+A+ + ++ L+PNV YN +I K++ A +L +M+ G+ D ++Y +
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 366 QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
++ A L S + PD + +++ L + G+F KA+++ E
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLE 789
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 111/234 (47%), Gaps = 2/234 (0%)
Query: 139 EMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKR 198
EM E+ N F + + ++N D A+ M +K + + L+ CK+
Sbjct: 615 EMSENGKSP-NVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKK 673
Query: 199 KHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
+K A F + L+ Y+ LISG+ +G A +L++ M++ G DL Y
Sbjct: 674 NDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTY 733
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
+D L K G ++ A++++ ++L + PD + + ++ A ++L++M++
Sbjct: 734 TTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKK 793
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCD 371
++ PNV Y+ +I + + EA+ L DEM+ +G+ D +N + + +
Sbjct: 794 KDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVE 847
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 130/295 (44%), Gaps = 12/295 (4%)
Query: 120 LVEILGSCKQFAILWDFLTEMRES-SCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE 178
L ++ + K +L + + E R S SC NS I F+ + D A+ ++ M E
Sbjct: 564 LCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV-----KVGDTDSAVETYREMSE 618
Query: 179 FGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGK 237
G P + F L+ CK + A + + KS L L Y LI G+ K D
Sbjct: 619 NGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKT 678
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A LF + + G ++ YN+ + G +D A +++ M++ + D FTY+ I
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
+I+ A + ++ ++P+ + ++ L K + +A ++L+EM + V P
Sbjct: 739 GLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTP 798
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
+ Y+ + A H ++ A RL M + D +N+++ GR +K
Sbjct: 799 NVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS-----GRVEK 848
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 155/376 (41%), Gaps = 55/376 (14%)
Query: 63 PHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVE 122
P+H S ++ + V +VL +N SA ++ W K + + F +L+
Sbjct: 62 PNHSPLTSTSETENHVDDARVIEVLLGRRNDPVSALQYCNWVKPLHRLCEGGDVFWVLIH 121
Query: 123 ILGSCKQF--------------------AILWDFLTEMRESSCCEINSDIFWFIFKAYSR 162
IL S ++ + L + + E+ F ++ AY R
Sbjct: 122 ILLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIR 181
Query: 163 ANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTY 222
D A+ F M + + P + + +L L + + +A++ +++
Sbjct: 182 NKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM----------- 230
Query: 223 SILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS 282
+LI G GD+ + L +A L + P +EA IF ++S
Sbjct: 231 -VLI---GVAGDNVTTQLLMRASLRERKP-------------------EEAVKIFRRVMS 267
Query: 283 KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR-RCNLLPNVFTYNCIIKRLCKNDKVE 341
+ EPD +S+ + C D+ A +L +MR + + + TY +I K +E
Sbjct: 268 RGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNME 327
Query: 342 EAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
EA ++DEM+ G+ + ++ +C E+ +AL L +RME++ PD+ +++++
Sbjct: 328 EAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387
Query: 402 KLLIRIGRFDKATEVW 417
+ + +KA E +
Sbjct: 388 EWFCKNMEMEKAIEFY 403
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 116/283 (40%), Gaps = 36/283 (12%)
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH 214
+ +A R P+ A++ F R+ G +P F + + CK + A + +
Sbjct: 244 LLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGK 303
Query: 215 FLLTA--KTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
+ A +TY+ +I + K G+ +A + M+ G P+ ++A + ++ CKG + +
Sbjct: 304 LGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGK 363
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV-------- 324
A ++F+ M + + PD +S+ + +C ++ A +M+ + P+
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 325 --------------------------FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
F N I CK KV+ A L M +G++P+
Sbjct: 424 GCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
YN + HC + A + S M + P+ TY++++
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILI 526
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 128/304 (42%), Gaps = 2/304 (0%)
Query: 117 FHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRM 176
F + V+ + D L EMR + + + + A+ + + A+R M
Sbjct: 277 FSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKT-YSILISGWGKIGDS 235
FGI ++ L+ CK + +A F++ + L K +S+++ + K +
Sbjct: 337 VGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEM 396
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIF 295
KA E + M + + + K + A IF+D + IF
Sbjct: 397 EKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIF 456
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
+ +C + +A L M + + PNV YN ++ C+ ++ A + EM+ +G+
Sbjct: 457 L-LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
+P+ ++Y+ + + + A ++++M N + YN ++ L ++G+ KA E
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKE 575
Query: 416 VWEN 419
+ +N
Sbjct: 576 MLQN 579
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 146/321 (45%), Gaps = 7/321 (2%)
Query: 61 RHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHIL 120
R P + L S ++++ +VE VL K G A+ FF WA G+++ + +++ +
Sbjct: 54 RQPFSPDDPELLILSPELNTKVVETVLNGFKRWGL-AYLFFNWASKQEGYRNDMYAYNAM 112
Query: 121 VEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFG 180
IL +Q A L + ++ S C ++ F F + A L D A F R+ E G
Sbjct: 113 ASILSRARQNASLKALVVDVLNSRCF-MSPGAFGFFIRCLGNAGLVDEASSVFDRVREMG 171
Query: 181 I-KPTIHDFDMLLYFLCKRKH--VKQAQQFFDQAKS-HFLLTAKTYSILISGWGKIGDSG 236
+ P + ++ LL + K V+ + + + F T + ++ + G S
Sbjct: 172 LCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSE 231
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
+A +F +L +G +D + + CK G VD+A + + + + + TY + I
Sbjct: 232 RALSVFNEILSRGW-LDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLI 290
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
H + + I AF++ +KMRR + ++ Y+ +I LCK+ +E A L E+ G+
Sbjct: 291 HGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIP 350
Query: 357 PDTWSYNAIQAHHCDHCEVSR 377
PD + + E+SR
Sbjct: 351 PDRGILGKLLCSFSEESELSR 371
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 3/232 (1%)
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILI 226
GA+ +M +G +P I L+ LC+ A ++ D A FL + I
Sbjct: 527 GALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAI 586
Query: 227 SGWGKIGDSGKARELFQAMLDQG-CPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
G K + ELF+ + G CP D++AY+ + ALCK EA +F++M+SK +
Sbjct: 587 DGLIKNEGVDRGLELFRDICANGHCP-DVIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+P TY+ I +C +I + +M P+V TY +I LC + + EA
Sbjct: 646 KPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIF 705
Query: 346 LLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
+EM + P+ ++ A+ C AL ME+ PD Y
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 150/367 (40%), Gaps = 48/367 (13%)
Query: 79 SSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQ------HSVESFHILVEILGS------ 126
S +LVE LK ++ GF +F L P Q S + + EIL
Sbjct: 194 SVELVEARLKEMRDCGFHFDKFTL----TPVLQVYCNTGKSERALSVFNEILSRGWLDEH 249
Query: 127 ---------CKQFAILWDF-LTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRM 176
CK + F L EM E +N + + + + + D A + F +M
Sbjct: 250 ISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKM 309
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDS 235
G+ I +D+L+ LCK K ++ A + + K + + L+ + + +
Sbjct: 310 RRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESEL 369
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS------------- 282
+ E+ +D+ +L Y + + + V EA + +++
Sbjct: 370 SRITEVIIGDIDKKSV--MLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKL 427
Query: 283 -----KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
K + PD+ + SI I+ AN + A +L + + L+P YN II+ +CK
Sbjct: 428 LKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKE 487
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP-DRHT 396
+ EE+ +LL EM GV+P ++ N I + C+ AL L+ +M P +HT
Sbjct: 488 GRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHT 547
Query: 397 YNMVLKL 403
+V KL
Sbjct: 548 TFLVKKL 554
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 1/270 (0%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
+SD + +AN D A+ + + G+ P ++ ++ +CK +++ +
Sbjct: 438 DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 209 DQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
+ K + ++ T + + + D A +L + M G + + LC+
Sbjct: 498 GEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCEN 557
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
G +A D+ + + I + + + P+V Y
Sbjct: 558 GRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAY 617
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
+ +IK LCK + EA L +EM+ +G+KP +YN++ C E+ R L + RM +
Sbjct: 618 HVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYE 677
Query: 388 DNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
D PD TY ++ L GR +A W
Sbjct: 678 DEKNPDVITYTSLIHGLCASGRPSEAIFRW 707
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 92/201 (45%), Gaps = 4/201 (1%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
Y+ + S + + + L +L+ C + A+ F+ L G VDEA+++F +
Sbjct: 108 AYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRV 167
Query: 281 LSKRV-EPDAFTYSIFIHTYCDAND--IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+ P+A+TY+ + +N + L +MR C + FT +++ C
Sbjct: 168 REMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNT 227
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
K E A + +E++ RG + S + C +V +A L+ +E+ + + TY
Sbjct: 228 GKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTY 286
Query: 398 NMVLKLLIRIGRFDKATEVWE 418
+++ ++ R DKA +++E
Sbjct: 287 CVLIHGFVKESRIDKAFQLFE 307
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 1/186 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKAREL 241
P + + +L+ LCK +A F++ S L T TY+ +I GW K G+ +
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
M + D++ Y + + LC G EA +++M K P+ T+ I C
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
A +M + P+ Y ++ ++ + + + EM+ +G P +
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVD 791
Query: 362 YNAIQA 367
N + A
Sbjct: 792 RNYMLA 797
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 163/394 (41%), Gaps = 45/394 (11%)
Query: 52 EISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWA---KSIP 108
++ V+S R LE LN + + D V +V + G + RF WA + I
Sbjct: 129 KLESVLSLLRSDEESLEFGLNALNVDLHLDFVVRVFESPGISGKNLIRFLKWATQNEEIT 188
Query: 109 GFQHSVESFHILVEILGSCKQFAI--LWDFLTEMRE-SSCCEINSDIFWFIFKAYSRANL 165
VES +LV I ++ LWD + E+ E SC +N +I + + +
Sbjct: 189 VTTSLVES--LLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFGKLGK 246
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSI 224
A F + +EFG P + + L LCKR + A ++ KS L +
Sbjct: 247 SKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGN 306
Query: 225 LISGWGKIGDSGKARELFQ---------------AMLDQGCPVD---------------- 253
+I+ + K G + +A +++ ++ C D
Sbjct: 307 IITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGE 366
Query: 254 -----LLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSA 308
+ +++ + +LC+ V +A + DM+SK P +++ +H D+ A
Sbjct: 367 ARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEA 426
Query: 309 FRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAH 368
VL M L P+V+TY II K ++EA E+L E + K +Y+A+
Sbjct: 427 KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRG 486
Query: 369 HCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
+C E AL+L++ M++ P+ YN +++
Sbjct: 487 YCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQ 520
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISGWGKIGDSGKA 238
GIKP F +++ LC+ ++VK A+ D +++++ K GD +A
Sbjct: 371 GIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEA 426
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+E+ + M +G D+ Y + KGG +DEA I + K + TY I
Sbjct: 427 KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRG 486
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC-KNDKVEEAYELLDEMILRGVKP 357
YC + A ++L++M R + PN YN +I+ C K E+A L +EM +G+
Sbjct: 487 YCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHL 546
Query: 358 DTWSYNAIQA 367
+ S I+A
Sbjct: 547 NAISQGLIRA 556
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
N +++ + +RA D +F M +G P F++LL K K K+ + F
Sbjct: 663 NQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF 722
Query: 209 DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
AK H ++ +Y+ +I+ +GK D + M G V L AYN LDA K
Sbjct: 723 LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDK 782
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYN 328
+++ +I M PD +TY+I I+ Y + I VL +++ L P++ +YN
Sbjct: 783 QMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYN 842
Query: 329 CIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY 362
+IK VEEA L+ EM R + PD +Y
Sbjct: 843 TLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTY 876
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 145/331 (43%), Gaps = 10/331 (3%)
Query: 86 VLKRCKNLG-FSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESS 144
+LKR ++ +A +FF W + + ++ +++ +LG +++ D + E+
Sbjct: 145 ILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFH 204
Query: 145 CCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
+ + +F + A ++ A + F M EFG++P + ML+ K +V++A
Sbjct: 205 EFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEA 264
Query: 205 QQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
+ F + ++ YS +I+ + ++ KA E+ M + L + L+A
Sbjct: 265 EFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAY 324
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
+ G ++ A +I M + P+ Y+ I Y + +A + ++ L P+
Sbjct: 325 SQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDE 384
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
+Y +I+ + D EEA E+ G KP++++ + + + A++ +
Sbjct: 385 TSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIED 444
Query: 385 MEKDNCFPDRHTYNMVLKLLI----RIGRFD 411
M C Y+ +L +++ ++G+ D
Sbjct: 445 MTGIGC-----QYSSILGIILQAYEKVGKID 470
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 75/180 (41%), Gaps = 1/180 (0%)
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
K + L+ + G + YN ++ + +DE + F +M+ P+ T+++ +
Sbjct: 647 KLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLL 706
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
Y A + +R ++ +V +YN II KN + M G
Sbjct: 707 DVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFS 765
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+YN + + ++ + ++ RM+K PD +TYN+++ + G D+ +V
Sbjct: 766 VSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADV 825
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDS 235
+E G P ++ +++L+ C R + +A++ +++ K ++ Y+ +I G +
Sbjct: 273 EEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEV 332
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIF 295
KA+ELF+ M +G L Y + ++ CK G VD ++ +M K E D T
Sbjct: 333 VKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEAL 392
Query: 296 IHTYCDAND----IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
+ CD D + +A V D +R P+ Y ++KRLC++ K++ A + EM+
Sbjct: 393 VEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMV 452
Query: 352 LRGVKPDTWSYNA 364
+G KP +Y A
Sbjct: 453 GKGFKPSQETYRA 465
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 100/223 (44%), Gaps = 6/223 (2%)
Query: 181 IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYS--ILISGWGKIGDSGKA 238
IKP F+ ++ + + ++ + + + + YS +L+ + G +A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
++++ M +G D++AYN + LC V +A +F DM K +E TY ++
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN---DKVEEAYELLDEMILRGV 355
YC A D+ S V +M+R + T +++ LC + +V EA +++ + + +
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAM 420
Query: 356 -KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
P Y + C+ ++ RAL + + M P + TY
Sbjct: 421 FYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETY 463
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 164/415 (39%), Gaps = 47/415 (11%)
Query: 43 NPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFL 102
+PL+ D VS +++ HR L Q S S E L N S RFFL
Sbjct: 39 DPLISDAVS----ILTHHRSKSRWSTLRSLQPSGFTPSQFSEITLCLRNNPHLSL-RFFL 93
Query: 103 WAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSD----IFWFIFK 158
+ + H S L+ IL + + + + + + + D +F + K
Sbjct: 94 FTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIK 153
Query: 159 AYSR-ANLP----------------DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHV 201
+Y+R + P DGA+ ++ GI I + L+ + +R+
Sbjct: 154 SYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGA 213
Query: 202 KQAQQFF-----------DQAK---SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLD 247
+ + D+AK A T++ ++ + + G++ +++ M +
Sbjct: 214 SNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEE 273
Query: 248 Q-GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
+ GC ++ +YN ++A C G + EA ++ +M + V D Y+ I C ++
Sbjct: 274 EVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVV 333
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
A + M + TY ++ CK V+ + EM +G + D + A+
Sbjct: 334 KAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALV 393
Query: 367 AHHCDHCEVSRALRLMSRMEKDNC-----FPDRHTYNMVLKLLIRIGRFDKATEV 416
CD + R + + + KD +P R+ Y +++K L G+ D+A +
Sbjct: 394 EGLCDDRDGQRVVE-AADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNI 447
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 70/165 (42%), Gaps = 16/165 (9%)
Query: 271 DEATNIFHDMLSK--RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYN 328
D +F ++ R F + + I + D+ +I A V+ K+R + + T N
Sbjct: 142 DRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCN 201
Query: 329 CIIKRLCKNDKVEEAYELLDEM-------------ILRGVKPDTWSYNAIQAHHCDHCEV 375
+I + + Y++ E+ ++ +KP+ ++N++ E
Sbjct: 202 ALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGET 261
Query: 376 SRALRLMSRMEKD-NCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
R+ ME++ C P+ ++YN++++ G +A +VWE
Sbjct: 262 EMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEE 306
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 176/399 (44%), Gaps = 8/399 (2%)
Query: 27 KQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISS-DLVEQ 85
+ +C H L + F+ L +++ + V + P H L + + A SS D+ +
Sbjct: 95 EASCVMIHLLVGSRRFDDALS-IMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVFDS 153
Query: 86 VLKRCKNLGFSAHRFFLWAKS-IPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESS 144
+++ C G + + + ++ GF SV + + + L + + W EM
Sbjct: 154 LVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLG 213
Query: 145 CCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
E N + F + ++ + + A+ F RM + G+ P + F+M++ CK ++ A
Sbjct: 214 YVE-NVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFA 272
Query: 205 QQFFDQA---KSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNF 260
Q + +F+ A TY+ +I+G+ K G A + M+ G + Y
Sbjct: 273 LQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGAL 332
Query: 261 LDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNL 320
+DA + G DEA + +M SK + + Y+ ++ DI A VL M N+
Sbjct: 333 VDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNM 392
Query: 321 LPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALR 380
+ FT +++ LC+N V+EA E ++ + + D +N + H +++ A +
Sbjct: 393 QIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQ 452
Query: 381 LMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
++ M D ++ ++ ++ G+ ++A E+++
Sbjct: 453 ILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDG 491
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 162/371 (43%), Gaps = 25/371 (6%)
Query: 70 SLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLW-------AKSIPGFQHSVESFHILVE 122
+L+QFS+ +++ L+ +VL+ ++ A F+ W AKS F+ S H+LV
Sbjct: 47 TLHQFSSSLTNPLISRVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVG 106
Query: 123 ILGSCKQFAILWDFLTE--------------MRESSCCEINSDIFWFIFKAYSRANLPDG 168
+I+ + ++ +R C + D+F + +A ++ G
Sbjct: 107 SRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQG 166
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILIS 227
A + G ++H + + L + + + + + S ++ T++++I
Sbjct: 167 AYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIY 226
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH--DMLSKR- 284
+ K +A +F ML G +++++N +D CK G + A + M+S
Sbjct: 227 SFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNF 286
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
V P+A TY+ I+ +C A + A R+ M + + N TY ++ + +EA
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
L DEM +G+ +T YN+I ++ A+ ++ M N DR T +V++ L
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Query: 405 IRIGRFDKATE 415
R G +A E
Sbjct: 407 CRNGYVKEAVE 417
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 7/220 (3%)
Query: 189 DMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLD 247
+ L++ + K + A Q L L A ++ LI G+ K G +A E++ M+
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 248 QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHS 307
+L+ YN+ ++ L K G A + + M K D TY+ ++ ++
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEE 550
Query: 308 AFRVLDKMRRCNLLPNV--FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
A +L KM++ + +V T+N +I LCK E+A E+L M+ RGV PD+ +Y +
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 366 QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLI 405
H + + L + P H Y +++ L+
Sbjct: 611 ITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLL 650
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 111/256 (43%), Gaps = 12/256 (4%)
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
NS ++W + +GA+ M+ ++ +++ LC+ +VK+A +F
Sbjct: 365 NSIVYWLFMEGD-----IEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQ 419
Query: 209 DQAKSHFLLTAKT-YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
Q L+ ++ L+ + + A ++ +ML QG +D +++ +D K
Sbjct: 420 RQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKE 479
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
G ++ A I+ M+ + Y+ ++ +A V++ M + ++ TY
Sbjct: 480 GKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTY 535
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILR-GVKPDTW-SYNAIQAHHCDHCEVSRALRLMSRM 385
N ++ K VEEA ++L +M + G K + ++N + H C +A ++ M
Sbjct: 536 NTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFM 595
Query: 386 EKDNCFPDRHTYNMVL 401
+ PD TY ++
Sbjct: 596 VERGVVPDSITYGTLI 611
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 4/278 (1%)
Query: 137 LTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLC 196
L +M +S ++ + + A SR + DGA++ F M+ +P + ++ ++
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 197 KRKHVKQAQQFFDQAK-SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLL 255
+ +A++ F + + F A TY+ L+ + + ++ K +E++Q M G D +
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 256 AYNNFLDALCKGGCVDEATNIFHDM--LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
YN + K G +D A ++ DM LS R PDA TY++ I + AN A ++
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGR-NPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
+M + P + TY+ +I K K EEA + M+ G KPD +Y+ +
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGN 522
Query: 374 EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
E +A L M D P Y +++ L++ R D
Sbjct: 523 ETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSD 560
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 139/320 (43%), Gaps = 13/320 (4%)
Query: 102 LWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYS 161
++ ++ P V+ ++ ++ + +F+ + + MR+ C D+ F
Sbjct: 213 IFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCV---PDLI--SFNTLI 267
Query: 162 RANLPDGAIRSFLRMDEF------GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
A L G + L ++ G++P ++ LL + ++ A + F+ ++H
Sbjct: 268 NARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHR 327
Query: 216 LLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
TY+ +IS +G+ G + +A LF + +G D + YN+ L A + ++
Sbjct: 328 CQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVK 387
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLL-PNVFTYNCIIKR 333
++ M D TY+ IH Y + A ++ M+ + P+ TY +I
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 334 LCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
L K ++ EA L+ EM+ G+KP +Y+A+ + + A S M + PD
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
Query: 394 RHTYNMVLKLLIRIGRFDKA 413
Y+++L +L+R KA
Sbjct: 508 NLAYSVMLDVLLRGNETRKA 527
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELF 242
P +L L + A + F +A+ + Y+ ++ + + G KA+EL
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELV 248
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDE--ATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
AM +GC DL+++N ++A K G + A + + + + PDA TY+ +
Sbjct: 249 DAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACS 308
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
+++ A +V + M P+++TYN +I + EA L E+ L+G PD
Sbjct: 309 RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAV 368
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+YN++ + + +M+K D TYN ++ + + G+ D A +++++
Sbjct: 369 TYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 131/315 (41%), Gaps = 43/315 (13%)
Query: 109 GFQHSVESFHILVEIL---GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANL 165
G +VES +IL+ L G ++ ++ + L +M +I+ + A++RA
Sbjct: 817 GPSPTVESINILLHALCVDGRLEELYVVVEELQDM----GFKISKSSILLMLDAFARAGN 872
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSI 224
+ + M G PTI + M++ LCK K V+ A+ + +++F + ++
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
++ + I D K +++Q + + G
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETG----------------------------------- 957
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+EPD TY+ I YC + ++ +MR L P + TY +I K +E+A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+L +E++ +G+K D Y+ + D S+A +L+ M+ P T ++++
Sbjct: 1018 QLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSY 1077
Query: 405 IRIGRFDKATEVWEN 419
G +A +V N
Sbjct: 1078 SSSGNPQEAEKVLSN 1092
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 122/302 (40%), Gaps = 6/302 (1%)
Query: 120 LVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEF 179
++ +LG Q ++ + T R ++ + YSR+ A M +
Sbjct: 197 ILGVLGRWNQESLAVEIFT--RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQR 254
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQ--AQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSG 236
G P + F+ L+ K + A + D ++ L A TY+ L+S + +
Sbjct: 255 GCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLD 314
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
A ++F+ M C DL YN + + G EA +F ++ K PDA TY+ +
Sbjct: 315 GAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLL 374
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI-LRGV 355
+ + + V +M++ + TYN II K +++ A +L +M L G
Sbjct: 375 YAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR 434
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
PD +Y + A LMS M P TY+ ++ + G+ ++A +
Sbjct: 435 NPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAED 494
Query: 416 VW 417
+
Sbjct: 495 TF 496
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 112/251 (44%), Gaps = 2/251 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G+ ++ + +++E+L K+ ++EM E++ ++ I+ + K Y+
Sbjct: 887 GYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF-KVELAIWNSMLKMYTAIEDYKK 945
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILIS 227
++ + R+ E G++P ++ L+ C+ + ++ Q ++ L TY LIS
Sbjct: 946 TVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+GK +A +LF+ +L +G +D Y+ + G +A + M + +EP
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEP 1065
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
T + + +Y + + A +VL ++ + Y+ +I ++ E L
Sbjct: 1066 TLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERL 1125
Query: 348 DEMILRGVKPD 358
EM G++PD
Sbjct: 1126 LEMKKEGLEPD 1136
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 87/187 (46%)
Query: 220 KTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
KT++ L+S + + G +AR +F M+ G + + N L ALC G ++E + +
Sbjct: 788 KTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEE 847
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
+ + + + + + A +I ++ M+ LP + Y +I+ LCK +
Sbjct: 848 LQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKR 907
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
V +A ++ EM K + +N++ + + + +++ R+++ PD TYN
Sbjct: 908 VRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNT 967
Query: 400 VLKLLIR 406
++ + R
Sbjct: 968 LIIMYCR 974
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 2/197 (1%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK--S 213
+ A++R + + +M + G ++ +++ K+ + A Q + K S
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 214 HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEA 273
A TY++LI GK + +A L MLD G L Y+ + K G +EA
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Query: 274 TNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
+ F ML +PD YS+ + N+ A+ + M P+ Y +I
Sbjct: 493 EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILG 552
Query: 334 LCKNDKVEEAYELLDEM 350
L K ++ ++ + + +M
Sbjct: 553 LMKENRSDDIQKTIRDM 569
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 130/295 (44%), Gaps = 2/295 (0%)
Query: 109 GFQHSVESFHILVEILG-SCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPD 167
G+Q ++ ++++ L S K +++ L + E E++ + I ++++ P
Sbjct: 227 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 286
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILI 226
A++ G+ ++ L +A+ F++ + S + Y+ L+
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
G+ K G A + M +G D Y+ +DA G + A + +M + V+
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P++F +S + + D + F+VL +M+ + P+ YN +I K + ++ A
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
D M+ G++PD ++N + HC H A + ME+ C P TYN+++
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 131/319 (41%), Gaps = 37/319 (11%)
Query: 136 FLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFL 195
++EM E + + + AY A + A M+ ++P F LL
Sbjct: 361 MVSEM-EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF 419
Query: 196 CKRKHVKQAQQFFDQAKSHFLLTAKT-YSILISGWGKIGDSGKARELFQAMLDQGCPVDL 254
R ++ Q + KS + + Y+++I +GK A F ML +G D
Sbjct: 420 RDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDR 479
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
+ +N +D CK G A +F M + P A TY+I I++Y D R+L K
Sbjct: 480 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGK 539
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC- 373
M+ +LPNV T+ ++ K+ + +A E L+EM G+KP + YNA+ +
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 374 --EVSRALRLMSR--------------------------------MEKDNCFPDRHTYNM 399
+ A R+M+ M+++ PD TY
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 400 VLKLLIRIGRFDKATEVWE 418
++K LIR+ +F K V+E
Sbjct: 660 LMKALIRVDKFQKVPVVYE 678
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 2/268 (0%)
Query: 134 WDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLY 193
+ L EM+ S + + + + + + N D A+ +F RM GI+P ++ L+
Sbjct: 429 FQVLKEMK-SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLID 487
Query: 194 FLCKR-KHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPV 252
CK +H+ + F + L A TY+I+I+ +G + L M QG
Sbjct: 488 CHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILP 547
Query: 253 DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
+++ + +D K G ++A +M S ++P + Y+ I+ Y A
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
M L P++ N +I ++ + EA+ +L M GVKPD +Y +
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV 667
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMV 400
+ + + M C PDR +M+
Sbjct: 668 DKFQKVPVVYEEMIMSGCKPDRKARSML 695
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 44/230 (19%)
Query: 222 YSILISGWGKIGDSGKARELFQA-MLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
YSILI G+ + +L++A +L Q + L YN + A + +++A N+ M
Sbjct: 170 YSILIHALGR------SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKM 223
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHS--------------------------------- 307
+ D YS+ I + +N I S
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 308 ----AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYN 363
A ++L + L T II L + + EA L +E+ G+KP T +YN
Sbjct: 284 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 343
Query: 364 AIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
A+ + + A ++S MEK PD HTY++++ + GR++ A
Sbjct: 344 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 106/249 (42%), Gaps = 3/249 (1%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA---QQFFDQAK 212
+ A +R N + A+ +M + G + ++ +++ L + + + + + +
Sbjct: 203 LIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIER 262
Query: 213 SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
L + + +I G+ K GD KA +L G + + AL G E
Sbjct: 263 DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLE 322
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
A +F ++ ++P Y+ + Y + A ++ +M + + P+ TY+ +I
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP 392
+ E A +L EM V+P+++ ++ + A D E + +++ M+ P
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 393 DRHTYNMVL 401
DR YN+V+
Sbjct: 443 DRQFYNVVI 451
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 140/319 (43%), Gaps = 6/319 (1%)
Query: 103 WAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSR 162
W FQ V F++L++ G Q+ ++ ES D + + KAY
Sbjct: 166 WILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVP-TEDTYALLIKAYCM 224
Query: 163 ANLPDGAIRSFLRMDEFGIKPT---IHDFDMLLYFLCKRK-HVKQAQQFFDQAK-SHFLL 217
A L + A + M + P + ++ + L KRK + ++A F + K
Sbjct: 225 AGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKP 284
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
T +TY+++I+ +GK S + +L+ M C ++ Y ++A + G ++A IF
Sbjct: 285 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+ +EPD + Y+ + +Y A + A + M+ P+ +YN ++ +
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 404
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
+A + +EM G+ P S+ + + + +V++ ++ M ++ PD
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 398 NMVLKLLIRIGRFDKATEV 416
N +L L R+G+F K ++
Sbjct: 465 NSMLNLYGRLGQFTKMEKI 483
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 122/310 (39%), Gaps = 35/310 (11%)
Query: 113 SVESFHILVEILGSCKQFAILWDFLTEMRESSC-------------------CEINSDIF 153
+ E++++++ + G + + W EMR C CE +IF
Sbjct: 285 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 344
Query: 154 -----------WFIFKA----YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKR 198
+++ A YSRA P GA F M G +P +++++ +
Sbjct: 345 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 404
Query: 199 KHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
A+ F++ K + T K++ +L+S + K D K + + M + G D
Sbjct: 405 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 464
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
N+ L+ + G + I +M + D TY+I I+ Y A + + +++
Sbjct: 465 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 524
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
N P+V T+ I + + E+ +EMI G PD + + + +V +
Sbjct: 525 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQ 584
Query: 378 ALRLMSRMEK 387
++ M K
Sbjct: 585 VTSVLRTMHK 594
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 140/319 (43%), Gaps = 6/319 (1%)
Query: 103 WAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSR 162
W FQ V F++L++ G Q+ ++ ES D + + KAY
Sbjct: 144 WILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVP-TEDTYALLIKAYCM 202
Query: 163 ANLPDGAIRSFLRMDEFGIKPT---IHDFDMLLYFLCKRK-HVKQAQQFFDQAK-SHFLL 217
A L + A + M + P + ++ + L KRK + ++A F + K
Sbjct: 203 AGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKP 262
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
T +TY+++I+ +GK S + +L+ M C ++ Y ++A + G ++A IF
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+ +EPD + Y+ + +Y A + A + M+ P+ +YN ++ +
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 382
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
+A + +EM G+ P S+ + + + +V++ ++ M ++ PD
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 398 NMVLKLLIRIGRFDKATEV 416
N +L L R+G+F K ++
Sbjct: 443 NSMLNLYGRLGQFTKMEKI 461
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 122/310 (39%), Gaps = 35/310 (11%)
Query: 113 SVESFHILVEILGSCKQFAILWDFLTEMRESSC-------------------CEINSDIF 153
+ E++++++ + G + + W EMR C CE +IF
Sbjct: 263 TTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIF 322
Query: 154 -----------WFIFKA----YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKR 198
+++ A YSRA P GA F M G +P +++++ +
Sbjct: 323 EQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 382
Query: 199 KHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
A+ F++ K + T K++ +L+S + K D K + + M + G D
Sbjct: 383 GLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL 442
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
N+ L+ + G + I +M + D TY+I I+ Y A + + +++
Sbjct: 443 NSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
N P+V T+ I + + E+ +EMI G PD + + + +V +
Sbjct: 503 KNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQ 562
Query: 378 ALRLMSRMEK 387
++ M K
Sbjct: 563 VTSVLRTMHK 572
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 41/297 (13%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
+ K Y+R D A RM E GI+P + ++ L+ K + + Q FD+ H
Sbjct: 54 LIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEM-LHS 112
Query: 216 LLTAK--TYSILISGWGKIGDSGKA-RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDE 272
L+ +Y+ L+S + K+G G+A + L + + G + YN LDALCK G D
Sbjct: 113 GLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDN 172
Query: 273 ATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY----- 327
A +F L RV+P+ TY+I I+ C + + S ++ ++++ PN TY
Sbjct: 173 AIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLK 231
Query: 328 -----------------------------NC-IIKRLCKNDKVEEAYELLDEMILRGVKP 357
NC ++ L K + EEAYE + E++ G +
Sbjct: 232 MYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRS 291
Query: 358 -DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
D SYN + + + L+ +E PD +T+ +++ L+ IG A
Sbjct: 292 QDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGA 348
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
N +++LCK ++ A + D + V PD TY+ I Y I A+ V +MR
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSR 377
+ P+V TYN +I KN + +L DEM+ G+ PD WSYN + + +
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 378 ALRLMSR-MEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
A +++ + P TYN++L L + G D A E+++
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFK 178
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH-D 279
TY+ LISG K + +LF ML G D+ +YN + K G EA I H D
Sbjct: 85 TYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHED 144
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
+ + P TY+I + C + +A + ++ + P + TYN +I LCK+ +
Sbjct: 145 IHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRR 203
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
V ++ E+ G P+ +Y + + + + L+L +M+K+ D
Sbjct: 204 VGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCA 263
Query: 400 VLKLLIRIGRFDKATE 415
V+ LI+ GR ++A E
Sbjct: 264 VVSALIKTGRAEEAYE 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 112/269 (41%), Gaps = 42/269 (15%)
Query: 151 DIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ 210
D + + A ++ D AI F + +KP + +++L+ LCK + V +
Sbjct: 155 DTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRE 213
Query: 211 -AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQG--------CPV--------- 252
KS + A TY+ ++ + K K +LF M +G C V
Sbjct: 214 LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR 273
Query: 253 -------------------DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
D+++YN L+ K G +D ++ ++ K ++PD +T++
Sbjct: 274 AEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHT 333
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
I ++ + + A + L + + P+V T NC+I LCK V+ A L M +R
Sbjct: 334 IIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR 393
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLM 382
D ++Y ++ + C + A +L+
Sbjct: 394 ----DEFTYTSVVHNLCKDGRLVCASKLL 418
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 5/199 (2%)
Query: 217 LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNI 276
++ K +I ++ K + +A L + G D++ YN + + +DEA +
Sbjct: 11 ISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAV 70
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
M +EPD TY+ I ++ ++ D+M L P++++YN ++ K
Sbjct: 71 TRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFK 130
Query: 337 NDKVEEAYELLDEMI-LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRH 395
+ EA+++L E I L G+ P +YN + C A+ L + K P+
Sbjct: 131 LGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELM 189
Query: 396 TYNMVLKLLI---RIGRFD 411
TYN+++ L R+G D
Sbjct: 190 TYNILINGLCKSRRVGSVD 208
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 13/254 (5%)
Query: 167 DGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF---DQAKSHFLLTAKTYS 223
+G+ +S + + +F M L+ + R ++++ F D + LT+ T++
Sbjct: 259 NGSAQSPVNLKQF--------LSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTS-TFN 309
Query: 224 ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
LI +GK G A LF ML G P+D + +N + G + EA ++ M K
Sbjct: 310 TLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEK 369
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
+ PD TY+I + + DA DI +A K+R+ L P+ T+ ++ LC+ V E
Sbjct: 370 GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEV 429
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
++ EM ++ D S I + + V +A L R + D C T V+ +
Sbjct: 430 EAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD-CVLSSTTLAAVIDV 488
Query: 404 LIRIGRFDKATEVW 417
G + +A V+
Sbjct: 489 YAEKGLWVEAETVF 502
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML 281
Y+++I +GK KA LF+ M +QG D YN+ L VDEA I +ML
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 282 SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVE 341
+P TY+ I +Y + A + + M + + PN Y +I ++ VE
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 342 EAYELLDEMILRGVKPDTWSYNA-IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
EA + M GV+ + + I+A+ C + A R+ +M+ PD N +
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGC-LEEARRVYDKMKDSEGGPDVAASNSM 696
Query: 401 LKLLIRIGRFDKATEVW 417
L L +G +A ++
Sbjct: 697 LSLCADLGIVSEAESIF 713
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 2/263 (0%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSH 214
+ KAY +A L + A+ F M G P ++ L L V +AQ+ + S
Sbjct: 521 MIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG 580
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
KTY+ +I+ + ++G A +L++AM G + + Y + ++ + G V+EA
Sbjct: 581 CKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAI 640
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
F M V+ + + I Y + A RV DKM+ P+V N ++
Sbjct: 641 QYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLC 700
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
V EA + + + +G D S+ + + + A+ + M + D
Sbjct: 701 ADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDC 759
Query: 395 HTYNMVLKLLIRIGRFDKATEVW 417
++N V+ G+ + E++
Sbjct: 760 TSFNQVMACYAADGQLSECCELF 782
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 136 FLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFL 195
L EM +S C + + + +Y R L A+ + M++ G+KP + L+
Sbjct: 572 ILAEMLDSGC-KPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGF 630
Query: 196 CKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDL 254
+ V++A Q+F + H + + + LI + K+G +AR ++ M D D+
Sbjct: 631 AESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
A N+ L G V EA +IF + L ++ D +++ ++ Y + A V ++
Sbjct: 691 AASNSMLSLCADLGIVSEAESIF-NALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEE 749
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
MR LL + ++N ++ + ++ E EL EM++
Sbjct: 750 MRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLV 787
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 79/162 (48%)
Query: 257 YNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR 316
+N +D K G +++A N+F +ML V D T++ IHT + A +L KM
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 317 RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVS 376
+ P+ TYN ++ +E A E ++ G+ PDT ++ A+ C V+
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 377 RALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+++ M++++ D H+ +++++ + G +A ++E
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFE 469
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 105/244 (43%), Gaps = 1/244 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDS 235
MD I+ H +++ V QA+ F++ + +L++ T + +I + + G
Sbjct: 436 MDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLW 495
Query: 236 GKARELFQAMLD-QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
+A +F + G D+L YN + A K ++A ++F M ++ PD TY+
Sbjct: 496 VEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS 555
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
+ + A R+L +M P TY +I + + +A +L + M G
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
VKP+ Y ++ + V A++ ME+ + ++K ++G ++A
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 415 EVWE 418
V++
Sbjct: 676 RVYD 679
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 113/305 (37%), Gaps = 36/305 (11%)
Query: 150 SDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD 209
+ F + Y +A + A F M + G+ F+ +++ H+ +A+
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 210 QAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
+ + + KTY+IL+S GD A E ++ + G D + + L LC+
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLP------ 322
V E + +M + D + + + Y + + A + ++ + +L
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAA 484
Query: 323 -----------------------------NVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
+V YN +IK K E+A L M +
Sbjct: 485 VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQ 544
Query: 354 GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
G PD +YN++ V A R+++ M C P TY ++ +R+G A
Sbjct: 545 GTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDA 604
Query: 414 TEVWE 418
+++E
Sbjct: 605 VDLYE 609
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 125/292 (42%), Gaps = 38/292 (13%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
+ K + A D A F+R+ EF + +++ F + ++ ++ +AQ D+
Sbjct: 538 MVKGFCAAGCLDHAFERFIRL-EFPLPKSVY-FTLFTSLCAEKDYISKAQDLLDRMWKLG 595
Query: 216 LLTAKT-YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
+ K+ Y LI W ++ + KARE F+ ++ + DL Y ++ C+ +A
Sbjct: 596 VEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAY 655
Query: 275 NIFHDMLSKRVEPDAFTYS----------------------------IFIHTYCDANDIH 306
+F DM + V+PD TYS I I+ YC ND+
Sbjct: 656 ALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLK 715
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
+ + M+R ++P+V TY ++K +K E L EM VKPD + Y +
Sbjct: 716 KVYALFKDMKRREIVPDVVTYTVLLK-----NKPER--NLSREMKAFDVKPDVFYYTVLI 768
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
C ++ A R+ +M + PD Y ++ ++G +A +++
Sbjct: 769 DWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFD 820
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 174 LRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKI 232
L M++ GI P ++ + ++ K ++ +A F++ K + S ++ + ++
Sbjct: 315 LDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQM 374
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
G+ +A +LF+ + +D + YN DAL K G V+EA +F +M K + PD Y
Sbjct: 375 GNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINY 434
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
+ I C AF ++ +M P++ YN + L N +EA+E L M
Sbjct: 435 TTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMEN 494
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRA 378
RGVKP ++N + D E+ +A
Sbjct: 495 RGVKPTYVTHNMVIEGLIDAGELDKA 520
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 15/256 (5%)
Query: 147 EINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
+I D+F + + Y R N P A F M +KP + + +LL +K+
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-DPELDMKRE 688
Query: 205 QQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
+ FD + Y+I+I+ + + D K LF+ M + D++ Y L
Sbjct: 689 MEAFD-----VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN- 742
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
N+ +M + V+PD F Y++ I C D+ A R+ D+M + P+
Sbjct: 743 ------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDA 796
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
Y +I CK ++EA + D MI GVKPD Y A+ A C + V +A++L+
Sbjct: 797 APYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKE 856
Query: 385 MEKDNCFPDRHTYNMV 400
M + P + + + V
Sbjct: 857 MLEKGIKPTKASLSAV 872
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 13/279 (4%)
Query: 142 ESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHV 201
E C +DI +F+ + AN+ + + GI + ++ LC +
Sbjct: 260 EGLCLNQMTDIAYFLLQPLRDANI-------LVDKSDLGIA-----YRKVVRGLCYEMRI 307
Query: 202 KQAQQF-FDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNF 260
+ A+ D K YS +I G K + KA ++F ML + ++ + ++
Sbjct: 308 EDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSI 367
Query: 261 LDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNL 320
L C+ G EA ++F + + D Y++ + A + +M +
Sbjct: 368 LQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGI 427
Query: 321 LPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALR 380
P+V Y +I C K +A++L+ EM G PD YN + + A
Sbjct: 428 APDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFE 487
Query: 381 LMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ ME P T+NMV++ LI G DKA +E+
Sbjct: 488 TLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYES 526
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 109/251 (43%), Gaps = 14/251 (5%)
Query: 152 IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA 211
I+ + + L A + M+ G+KPT +M++ L + +A+ F++
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Query: 212 KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC-KGGCV 270
+ + + + ++ G+ G A F+ + P+ Y +LC + +
Sbjct: 528 EHK---SRENDASMVKGFCAAGCLDHA---FERFIRLEFPLPKSVYFTLFTSLCAEKDYI 581
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
+A ++ M VEP+ Y I +C N++ A + + ++P++FTY +
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIM 641
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
I C+ ++ ++AY L ++M R VKPD +Y+ + + L + ME +
Sbjct: 642 INTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE-------LDMKREMEAFDV 694
Query: 391 FPDRHTYNMVL 401
PD Y +++
Sbjct: 695 IPDVVYYTIMI 705
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 133/294 (45%), Gaps = 5/294 (1%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
H FF W KS F +++ ++ L +QF ++ + EM + E+++ + I
Sbjct: 169 THTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGV-ELDNITYSTI 227
Query: 157 FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHF 215
R NL + AI F RM + G+ P + +L K V++ +++A + +
Sbjct: 228 ITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGW 287
Query: 216 LLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
A +S+L +G+ GD R + Q M +++ YN L+A+ + G A +
Sbjct: 288 KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARS 347
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
+F++ML + P+ T + + Y A A ++ ++M+ + YN ++ +C
Sbjct: 348 LFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MC 406
Query: 336 KNDKVEEAYELLDEMILRGV--KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
+ +EE E L + V +PD +SY A+ + + +A+ L M K
Sbjct: 407 ADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLK 460
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TYS +I+ + KA E F+ M G D + Y+ LD K G V+E +++
Sbjct: 223 TYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERA 282
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
++ +PDA +S+ + +A D VL +M+ ++ PNV YN +++ + + K
Sbjct: 283 VATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKP 342
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
A L +EM+ G+ P+ + A+ + AL+L M+ D YN +
Sbjct: 343 GLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTL 402
Query: 401 LKLLIRIGRFDKA 413
L + IG ++A
Sbjct: 403 LNMCADIGLEEEA 415
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 101/256 (39%), Gaps = 46/256 (17%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G++ +F +L ++ G + + L EM+ S + N ++ + +A RA P
Sbjct: 286 GWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMK-SMDVKPNVVVYNTLLEAMGRAGKPGL 344
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-----FLLTAKTYS 223
A F M E G+ P L+ K + + A Q +++ K+ F+L Y+
Sbjct: 345 ARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFIL----YN 400
Query: 224 ILISGWGKIGDSGKARELFQAMLDQ-GCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS 282
L++ IG +A LF M + C D +Y L+ GG ++A +F +ML
Sbjct: 401 TLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLK 460
Query: 283 KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEE 342
V+ NV C+++ L K ++++
Sbjct: 461 AGVQ-----------------------------------VNVMGCTCLVQCLGKAKRIDD 485
Query: 343 AYELLDEMILRGVKPD 358
+ D I RGVKPD
Sbjct: 486 VVYVFDLSIKRGVKPD 501
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 145/344 (42%), Gaps = 36/344 (10%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + S+ S+ L+ + KQ+ + ++E+ E S +++S F + A+S + +
Sbjct: 75 GHRPSLISYTTLLAAMTVQKQYGSISSIVSEV-EQSGTKLDSIFFNAVINAFSESGNMED 133
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD----QAKSHFLLTAKTYSI 224
A+++ L+M E G+ PT ++ L+ +++ + D + +T+++
Sbjct: 134 AVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNV 193
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC---KGGCVDEATNIFHDML 281
L+ W K +A E+ + M + G D + YN A C KG V + + M+
Sbjct: 194 LVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRAESEVVEKMV 251
Query: 282 SK-RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIK---RLCKN 337
K + +P+ T I + YC + R + +M+ + N+ +N +I +
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 338 DKVEEAYELL------DEMILRG----------------VKPDTWSYNAIQAHHCDHCEV 375
D ++E L +E+ L G VK D +Y+ + +
Sbjct: 312 DGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYM 371
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+A ++ M K PD H Y+++ K +R KA E+ E
Sbjct: 372 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 415
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 184 TIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELF 242
T+ L+ L +R +AQ F A++ + +Y+ L++ G +
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA 302
+ G +D + +N ++A + G +++A M + P TY+ I Y A
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 303 NDIHSAFRVLDKM---RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
+ +LD M ++ PN+ T+N +++ CK KVEEA+E++ +M GV+PDT
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 360 WSYNAIQAHHCDHCEVSRA-LRLMSRM-EKDNCFPDRHTYNMVLKLLIRIGRF 410
+YN I + E RA ++ +M K+ P+ T +V+ R GR
Sbjct: 224 VTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRV 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 1/166 (0%)
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
+G+ ++ M + D++ Y+ ++A G +++A +F +M+ V+PDA
Sbjct: 333 VGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 392
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
YSI Y A + A +L+ + PNV + +I C N +++A + ++M
Sbjct: 393 YSILAKGYVRAKEPKKAEELLETL-IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMC 451
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
GV P+ ++ + + + + +A ++ M P+ T+
Sbjct: 452 KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 125/308 (40%), Gaps = 45/308 (14%)
Query: 107 IPGFQH--------SVESFH-ILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIF 157
+P +QH ES + +++ G K + + + + ++ C + + F+ +
Sbjct: 79 LPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLM 138
Query: 158 KAYSR-ANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL 216
+ Y A + AI M +FG P+ F+ +L L K FD+ F+
Sbjct: 139 RIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAK-------LFDEIHKIFV 191
Query: 217 LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNI 276
K G +D N + LC+ G ++ A +
Sbjct: 192 SAPKL---------------------------GVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
+ ++ P+ T+S I +C+ AF++L++M + + P+ T+N +I L K
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 337 NDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
+VEE +LL+ M ++G +P+ +Y + D A +MS+M P +
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Query: 397 Y-NMVLKL 403
Y MVL L
Sbjct: 345 YKKMVLGL 352
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%)
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
G +A E+ M D GC ++N L+ L DE IF VE DA
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
+I I C++ ++ +A ++LD+ + PNV T++ +I+ C K EEA++LL+ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
++PDT ++N + + V + L+ RM+ C P+ TY VL L+ R +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 413 ATEV 416
A E+
Sbjct: 326 AKEM 329
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 126/310 (40%), Gaps = 31/310 (10%)
Query: 59 DHRHPHHDLELSLNQFSAQISSDLVEQVL------KRCKNLGFSAHRFFLWAKSIPGFQH 112
D++ L +N+F D +E+V+ KRC+ FS F+ + + +
Sbjct: 90 DYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCR---FSEEFFYNLMRI---YGN 143
Query: 113 SVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRS 172
+ +EIL F C +S F FI A L D +
Sbjct: 144 LAGRINRAIEILFGMPDFG--------------CWPSSKSFNFILNLLVSAKLFDEIHKI 189
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD---QAKSHFLLTAKTYSILISGW 229
F+ + G++ ++L+ LC+ +++ A Q D Q KS T+S LI G+
Sbjct: 190 FVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSR--PNVMTFSPLIRGF 247
Query: 230 GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDA 289
G +A +L + M + D + +N + L K G V+E ++ M K EP+
Sbjct: 248 CNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNP 307
Query: 290 FTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDE 349
TY ++ D A ++ +M + P+ +Y ++ LC+ V E +L +
Sbjct: 308 GTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQ 367
Query: 350 MILRGVKPDT 359
M+ G P T
Sbjct: 368 MVNHGFVPKT 377
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAM-LDQGCPVDLLAYNNFLDALCK-GGCVDEATN 275
T Y+++I+ +G+ + E+ + + L++ C + N + G ++ A
Sbjct: 94 TESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIE 153
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDA---NDIHSAFRVLDKMRRCNLLPNVFTYNCIIK 332
I M P + +++ ++ A ++IH F K+ + + N +IK
Sbjct: 154 ILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL---GVEIDACCLNILIK 210
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFP 392
LC++ +E A +LLDE + +P+ +++ + C+ + A +L+ RMEK+ P
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 393 DRHTYNMVLKLLIRIGRFDKATEVWE 418
D T+N+++ L + GR ++ ++ E
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLE 296
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 173/440 (39%), Gaps = 71/440 (16%)
Query: 22 PLFQHKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPH-HDLELSLNQFSAQISS 80
P+ ++ +P P + NP +P L +S +V H H L+L +
Sbjct: 58 PVNSFNRSQQQQSQIPRP-IQNPNIPKLPESVSALVGKRLDLHNHILKLIR-------EN 109
Query: 81 DLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEM 140
DL E L ++ + ++ Q + L+++ G Q I + +T
Sbjct: 110 DLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIIT-- 167
Query: 141 RESSCCEINSDIFWFIFKAYSRANLPDGAIRSF-LRMDEFGIKPTIHDFDMLLYFLCKRK 199
+ IF+AY P+ A+ + L +D + P+I F +L+ L
Sbjct: 168 ------------YNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSND 215
Query: 200 HVKQAQQF-FDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQ-GCPVD---- 253
++++A + D A F++ YS L+ G K D+ +L+Q + ++ G VD
Sbjct: 216 NLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVV 275
Query: 254 ----------------------------------LLAYNNFLDALCKGGCVDEATNIFHD 279
+AYN L+AL + G DEA +F D
Sbjct: 276 YGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLF-D 334
Query: 280 MLSKRVEP------DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
+ K P + T+++ ++ YC A V +M P+ ++N ++ +
Sbjct: 335 AVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQ 394
Query: 334 LCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
LC N+ + EA +L EM + VKPD ++Y + ++ M + N P+
Sbjct: 395 LCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPN 454
Query: 394 RHTYNMVLKLLIRIGRFDKA 413
YN + LI+ G+ D A
Sbjct: 455 LAVYNRLQDQLIKAGKLDDA 474
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 7/209 (3%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKS------HFLLTAKTYSILISGWGKIGDSGKAREL 241
++ +L L + +A + FD K H + T++++++G+ G +A E+
Sbjct: 313 YNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEV 372
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F+ M D C D L++NN ++ LC + EA ++ +M K V+PD +TY + + T
Sbjct: 373 FRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFK 432
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
I M NL PN+ YN + +L K K+++A D M++ +K D +
Sbjct: 433 EGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFD-MMVSKLKMDDEA 491
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNC 390
Y I + + L+++ M D+
Sbjct: 492 YKFIMRALSEAGRLDEMLKIVDEMLDDDT 520
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 138/306 (45%), Gaps = 22/306 (7%)
Query: 119 ILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE 178
+++E L ++ DF + + + C N F K Y A L A ++F+R+ E
Sbjct: 498 VIIEGLCFARKVKEAEDFFSSLEQK--CPENKASF---VKGYCEAGLSKKAYKAFVRL-E 551
Query: 179 FGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTY-SILISGWGKIGDSGK 237
+ ++ ++ + L + LC ++++A + ++ + ++ +I + K+ + +
Sbjct: 552 YPLRKSV--YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVRE 609
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
A+ LF M+++G DL Y + C+ + +A ++F DM + ++PD TY++ +
Sbjct: 610 AQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLD 669
Query: 298 TYCDANDIH-------------SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
Y + H A VL + + +V Y +I R CK + +E+A
Sbjct: 670 RYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAA 729
Query: 345 ELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
EL D MI G++PD +Y + + + + A+ L++ + K P V
Sbjct: 730 ELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAA 789
Query: 405 IRIGRF 410
++ RF
Sbjct: 790 LKAKRF 795
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 43/284 (15%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKI 232
F ++ + G+ + + +++ LC++ ++++A + +S F Y I+G
Sbjct: 204 FKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVF-----GYKTFINGLCVT 258
Query: 233 GDSGKARELFQAMLDQ--------------------------------------GCPVDL 254
G++ KA L ++D+ G +D+
Sbjct: 259 GETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDV 318
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
A +D CK + EA ML K ++ + S+ + YC + A +
Sbjct: 319 YACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKE 378
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
R N+ + YN L K +VEEA+ELL EM RG+ PD +Y + +C +
Sbjct: 379 FRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGK 438
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
V AL L+ M + PD TYN+++ L R G ++ E++E
Sbjct: 439 VVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE 482
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 121/261 (46%), Gaps = 15/261 (5%)
Query: 109 GFQHSVESFHILVEILGSCKQFAIL--WDFLTEMRESSCCEINSDIFWF--IFKAYSRAN 164
G V ++ L++ G C Q ++ D + EM + ++ D+ + + +R
Sbjct: 418 GIVPDVINYTTLID--GYCLQGKVVDALDLIDEMIGNG---MSPDLITYNVLVSGLARNG 472
Query: 165 LPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSI 224
+ + + RM G KP +++ LC + VK+A+ FF + + +
Sbjct: 473 HEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK---CPENKAS 529
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
+ G+ + G S KA ++A + P+ Y +LC G +++A ++ M + R
Sbjct: 530 FVKGYCEAGLSKKA---YKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYR 586
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
VEP I +C N++ A + D M L+P++FTY +I C+ +++++A
Sbjct: 587 VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAE 646
Query: 345 ELLDEMILRGVKPDTWSYNAI 365
L ++M RG+KPD +Y +
Sbjct: 647 SLFEDMKQRGIKPDVVTYTVL 667
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 1/216 (0%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGK 231
+ M+E G ++ ++ CK ++ +A F D+ L + S+++ + K
Sbjct: 306 IIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCK 365
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
+ +A E F+ D +D + YN DAL K G V+EA + +M + + PD
Sbjct: 366 MDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVIN 425
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
Y+ I YC + A ++D+M + P++ TYN ++ L +N EE E+ + M
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
G KP+ + + I C +V A S +E+
Sbjct: 486 AEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQ 521
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%)
Query: 245 MLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAND 304
ML +G V+ + + L CK EA F + + D Y++
Sbjct: 344 MLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGR 403
Query: 305 IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNA 364
+ AF +L +M+ ++P+V Y +I C KV +A +L+DEMI G+ PD +YN
Sbjct: 404 VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 365 IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+ + + L + RM+ + P+ T +++++ L
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGL 503
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 16/268 (5%)
Query: 157 FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL 216
F A S+ + A M + GI P + ++ L+ C + V A D+ + +
Sbjct: 395 FDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGM 454
Query: 217 LT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
TY++L+SG + G + E+++ M +G + + + ++ LC V EA +
Sbjct: 455 SPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAED 514
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM----RRCNLLPNVFTYNCII 331
F + K E A F+ YC+A A++ ++ R+ + F+
Sbjct: 515 FFSSLEQKCPENKAS----FVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFS----- 565
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
LC +E+A+++L +M V+P + C V A L M +
Sbjct: 566 --LCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI 623
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWEN 419
PD TY +++ R+ KA ++E+
Sbjct: 624 PDLFTYTIMIHTYCRLNELQKAESLFED 651
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 173/422 (40%), Gaps = 32/422 (7%)
Query: 1 MSKMAFRSLFSRYKNLTSVVCPLFQHKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDH 60
MSK+ SL+SR + F+ + P Q + P + + V D
Sbjct: 1 MSKVG-SSLYSRLHGI-------FKESSIATAKSAKPRSQTKSTKFPSKLKASTASVGDG 52
Query: 61 RHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHIL 120
+D + S N Q VE+ + C++ F + + G +
Sbjct: 53 GQSSNDAKDSKNSKLTQ----KVEKFKRSCESESF---------RQVHGL------YSAF 93
Query: 121 VEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF-IFKAYSRANLPDGAIRSFLRMDEF 179
+ L K+F+ + + L ++ +I S+ F I Y + + + A + F M E
Sbjct: 94 IRRLREAKKFSTIDEVLQYQKK--FDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPEL 151
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK--TYSILISGWGKIGDSGK 237
+ T+ F+ LL K + +A + F + +T TY+ +I + G
Sbjct: 152 NCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDD 211
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
+F+ + G DL+++N L+ + E I+ M SK + P+ +Y+ +
Sbjct: 212 ILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVR 271
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
A ++D M+ + P+V TYN +I ++ +EE + +EM +G+ P
Sbjct: 272 GLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTP 331
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
DT +Y + C ++ RA+ + K + Y V++ L+ G+ D+AT++
Sbjct: 332 DTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLV 391
Query: 418 EN 419
+N
Sbjct: 392 KN 393
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 127/309 (41%), Gaps = 32/309 (10%)
Query: 100 FFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKA 159
F WA P F H S+HI + LG+ K + + D + ++ N +++ I
Sbjct: 158 LFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIG-NENLYNSIIFY 216
Query: 160 YSRANLPDGAIRSFLRM---DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL 216
+++A A+ F M +PTI + +L L R + + +
Sbjct: 217 FTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMET----- 271
Query: 217 LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNI 276
R LF+ M+D G D+ A N + V++A I
Sbjct: 272 ---------------------VRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRI 310
Query: 277 FHDM-LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
FH M + EP++FTY IH C +A +L +M+ +PN +YN ++
Sbjct: 311 FHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFA 370
Query: 336 KNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRH 395
+ ++++A + L EMI G D SY + C + A RL+ M ++ DR
Sbjct: 371 LSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE-MLREKQLVDRD 429
Query: 396 TYNMVLKLL 404
+Y+ ++ +L
Sbjct: 430 SYDKLVNVL 438
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 142/310 (45%), Gaps = 10/310 (3%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + ++ +F L++ Q A + +R S + + +F + A ++ D
Sbjct: 532 GVEANLHTFGALIDGCARAGQVAKAFGAYGILR-SKNVKPDRVVFNALISACGQSGAVDR 590
Query: 169 A--IRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSIL 225
A + + ++ + I P L+ C V++A++ + + + T + Y+I
Sbjct: 591 AFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIA 650
Query: 226 ISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRV 285
++ K GD A +++ M ++ D + ++ +D +DEA I D S+ +
Sbjct: 651 VNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGI 710
Query: 286 EPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYE 345
+YS + C+A D A + +K++ L P + T N +I LC+ +++ +A E
Sbjct: 711 RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAME 770
Query: 346 LLDEMILRGVKPDTWSYN--AIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
LDE+ G+KP+T +Y+ + + D EVS +L+S+ + D P+ + L
Sbjct: 771 YLDEIKTLGLKPNTITYSMLMLASERKDDFEVS--FKLLSQAKGDGVSPNLIMCRCITSL 828
Query: 404 LIRIGRFDKA 413
R RF+KA
Sbjct: 829 CKR--RFEKA 836
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 11/268 (4%)
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDML----LYFLCKRKH-VKQAQQFFDQAKS 213
AY+R L DG I+ + + E + + D D + + CK++ VK+A +F K
Sbjct: 406 AYNRL-LRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRF---TKL 461
Query: 214 HFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEA 273
T T+++L+S D AR + + + + G D Y + + K G VD
Sbjct: 462 ILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAM 521
Query: 274 TNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
+FH M + VE + T+ I A + AF +R N+ P+ +N +I
Sbjct: 522 FEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA 581
Query: 334 LCKNDKVEEAYELLDEMILRG--VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
++ V+ A+++L EM + PD S A+ C+ +V RA + + K
Sbjct: 582 CGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIR 641
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEVWEN 419
Y + + + G +D A ++++
Sbjct: 642 GTPEVYTIAVNSCSKSGDWDFACSIYKD 669
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 2/213 (0%)
Query: 148 INSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF 207
I++ F + + Y + DG + + M G+KP + ++ L+ + + K QA+
Sbjct: 278 IDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKII 337
Query: 208 F-DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
+ D + F TY+ L+ +G+ A +++ M ++G + ++ YN L
Sbjct: 338 YKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCAD 397
Query: 267 GGCVDEATNIFHDMLS-KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVF 325
VDEA IF DM + + +PD++T+S I Y + + A L +MR P +F
Sbjct: 398 NRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLF 457
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
+I+ K +V++ D+++ G+ PD
Sbjct: 458 VLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 126/297 (42%), Gaps = 3/297 (1%)
Query: 117 FHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRM 176
+++ +++ K EM E N+ F I + +P A+ F +M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNA-TFTTIISCARQNGVPKRAVEWFEKM 236
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH-FLLTAKTYSILISGWGKIGDS 235
FG +P ++ + +V A +D+A++ + + A T+S LI +G G+
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 236 GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIF 295
+++ M G +L+ YN +D++ + +A I+ D+++ P+ TY+
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI-LRG 354
+ Y A A + +M+ L V YN ++ N V+EA+E+ +M
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCET 416
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
PD+W+++++ + VS A + +M + P V++ + + D
Sbjct: 417 CDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVD 473
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 106/233 (45%), Gaps = 1/233 (0%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAML 246
+++ + K K ++++++ FD+ + T++ +IS + G +A E F+ M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
GC D + +DA + G VD A +++ +++ DA T+S I Y + +
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
+ ++M+ + PN+ YN +I + + + +A + ++I G P+ +Y A+
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ AL + M++ YN +L + D+A E++++
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQD 410
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 163/408 (39%), Gaps = 65/408 (15%)
Query: 8 SLFSRYKNLTSVVCPLFQHKQNCHHFHSLPTPQ-VFNPLLPDLVSEISRVVSDHRHPHHD 66
+L SR ++ TS LF+H SL + + +P D + P
Sbjct: 2 ALLSRIRSSTS----LFRHLNASPQIRSLSSASTILSP--------------DSKTPLTS 43
Query: 67 LELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGS 126
E S S S +++L+ C+ + P + +F VE L
Sbjct: 44 KEKSKAALSLLKSEKDPDRILEICRAASLT-----------PDCRIDRIAFSAAVENLAE 92
Query: 127 CKQFAILWDFLTEMRESSCCEINSDIFWF-IFKAYSRANLPDGAIRSFLRMDEFGIKPTI 185
K F+ + + L E+ ++ S+ F Y++AN+ D ++R F +++F I T+
Sbjct: 93 KKHFSAVSNLLDGFIENRP-DLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTV 151
Query: 186 HDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAM 245
+ LL+ K K+A++ + + +
Sbjct: 152 KSLNALLFACLVAKDYKEAKRVYIEMPKMY------------------------------ 181
Query: 246 LDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDI 305
G DL YN + C+ G + +I +M K ++P++ ++ + I + +
Sbjct: 182 ---GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKS 238
Query: 306 HSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
+VL M+ + V TYN I+ LCK K +EA LLD M+ G+KP+T +Y+ +
Sbjct: 239 DEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHL 298
Query: 366 QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
C+ + A +L M C PD Y ++ L + G F+ A
Sbjct: 299 IHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETA 346
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILISGWGKIGD 234
M+ GIKP F +++ + + K + + TY+I I K
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
S +A+ L ML G + + Y++ + C +EA +F M+++ +PD+ Y
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFT 332
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
I+ C D +A + + N +P+ ++ L K+ KVEEA EL+ ++
Sbjct: 333 LIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV 388
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%)
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
+ YN+ +D CK VD+A + M SK PD T+S I+ YC A + + + +
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
M R ++ N TY +I C+ ++ A +LL+EMI GV PD +++ + A C E
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 375 VSRALRLMSRMEK 387
+ +A ++ ++K
Sbjct: 131 LRKAFAILEDLQK 143
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 73/133 (54%)
Query: 218 TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
T TY+ +I G+ K A+ + +M +GC D++ ++ ++ CK VD IF
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
+M + + + TY+ IH +C D+ +A +L++M C + P+ T++C++ LC
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 338 DKVEEAYELLDEM 350
++ +A+ +L+++
Sbjct: 129 KELRKAFAILEDL 141
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 176 MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGD 234
M + I PT ++ ++ CK+ V A++ D S T+S LI+G+ K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
E+F M +G + + Y + C+ G +D A ++ ++M+S V PD T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 295 FIHTYCDANDIHSAFRVLDKMRR 317
+ C ++ AF +L+ +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%)
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
ML + P TY+ I +C + + A R+LD M P+V T++ +I CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
V+ E+ EM RG+ +T +Y + C ++ A L++ M PD T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 400 VLKLLIRIGRFDKATEVWEN 419
+L L KA + E+
Sbjct: 121 MLAGLCSKKELRKAFAILED 140
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 124/257 (48%), Gaps = 7/257 (2%)
Query: 118 HILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFW-FIFKAYSRANLPDGAIRSFLRM 176
+ V L C++F+ + + + +I + F+ + ++Y +A++ + A+R+F +M
Sbjct: 71 ELTVRRLAKCRRFSDIETLIESHKNDP--KIKEEPFYSTLIRSYGQASMFNHAMRTFEQM 128
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF--LLTAK-TYSILISGWGKIG 233
D++G + F+ LL K+ + Q FD+ + ++ K +Y ILI + G
Sbjct: 129 DQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSG 188
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
KA E+ + M +G V +A+ L +L K G ++ A N++++M+ K E D Y+
Sbjct: 189 TPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYN 248
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILR 353
+ I + ++++M L P+ +YN ++ C+ ++EA ++ + +
Sbjct: 249 VRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGN 307
Query: 354 GVKPDTWSYNAIQAHHC 370
P+ ++ + H C
Sbjct: 308 NCAPNAATFRTLIFHLC 324
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML 281
YS LI +G+ A F+ M G P +++N L+A D+ +F ++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 282 SK--RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
+ ++ PD +Y I I +YCD+ A ++ +M+ + + I+ L K +
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
+E A L +EM+ +G + D +YN ++ R L+ M PD +YN
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYN-VRIMSAQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 400 VLKLLIRIGRFDKATEVWEN 419
++ G D+A +V+E
Sbjct: 284 LMTAYCERGMLDEAKKVYEG 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 3/241 (1%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDI-FWFIFKAYSRANLPD 167
G S SF+ L+ K F + E+ + I I + + K+Y + P+
Sbjct: 132 GTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPE 191
Query: 168 GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILI 226
AI +M G++ T F +L L K+ ++ A +++ K L Y++ I
Sbjct: 192 KAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI 251
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
K + +EL + M G D ++YN + A C+ G +DEA ++ +
Sbjct: 252 MSAQKESPE-RVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCA 310
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P+A T+ I C + + + K + +P+ T ++ L +N K ++A L
Sbjct: 311 PNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGL 370
Query: 347 L 347
+
Sbjct: 371 I 371
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 149/355 (41%), Gaps = 37/355 (10%)
Query: 66 DLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPG---FQHSVESFHILVE 122
++E L + +S + V +VLK + A FF W +QHS +++ +
Sbjct: 212 EVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALR 271
Query: 123 ILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIK 182
+L A W + EM+ ++ +++ D + + + + ++ + ++ + M + K
Sbjct: 272 VLARPNSVAEFWSVVDEMK-TAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFK 330
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELF 242
P+I D +LL +L + F + + T K+ S +
Sbjct: 331 PSIQDCSLLLRYLSGSPNPDLDLVF--RVSRKYESTGKSLSKAV---------------- 372
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA 302
Y+ +L G DEA I M + EPD TYS + C A
Sbjct: 373 --------------YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKA 418
Query: 303 NDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY 362
+ A VLD+M P++ T+ +I+ CKN+++++A M+ +G D+
Sbjct: 419 KRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLL 478
Query: 363 NAIQAHHCDHCEVSRA-LRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ + H + A + LM ++ N P + TY +++ L++I + ++A ++
Sbjct: 479 DVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDL 533
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/392 (17%), Positives = 146/392 (37%), Gaps = 39/392 (9%)
Query: 66 DLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILG 125
++E L + ++ + VL++ + A+ F W G S + I++ IL
Sbjct: 75 EVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSIMLRILV 134
Query: 126 SCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRA---------------------- 163
+ W L EM++ ++ D + I+ S+
Sbjct: 135 QQRSMKRFWMTLREMKQGGFY-LDEDTYKTIYGELSKEKSKADAVAVAHFYERMLKENAM 193
Query: 164 NLPDGAIRSFLRMDEFG--IKPTIHDFDMLLY--FLCK-----RKHVKQAQQFF-----D 209
++ G + + + ++ ++ + + ++L F+ + R+H +A FF
Sbjct: 194 SVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGG 253
Query: 210 QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGC 269
+ S + + TY+ + + + + M G +DL Y K
Sbjct: 254 GSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRM 313
Query: 270 VDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAN--DIHSAFRVLDKMRRCNLLPNVFTY 327
+ E ++ M+ +P S+ + + D+ FRV K + Y
Sbjct: 314 MAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVY 373
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
+ I + L + +EA E+ M G +PD +Y+ + C + A ++ +ME
Sbjct: 374 DGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEA 433
Query: 388 DNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
CFPD T+ ++++ + DKA + N
Sbjct: 434 QGCFPDIKTWTILIQGHCKNNELDKALACFAN 465
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 144/341 (42%), Gaps = 38/341 (11%)
Query: 109 GFQHSVESFHILVEILGS-CKQFAILWDFLTEMRESSCCEINSDIFWF---IFKAYSRAN 164
G Q +V ++HI++ GS CK+ + + + + +I+ ++ + IF Y +
Sbjct: 337 GVQSNVFTYHIMI---GSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGG 393
Query: 165 LPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA----QQFFDQ---------- 210
+ D A+ +RM + GI P + +LL L K +K A Q D
Sbjct: 394 M-DKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID 452
Query: 211 ----------------AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDL 254
A+ L A +++ + + A + M++ GC
Sbjct: 453 DLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLP 512
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
+YN+ + L + +++ ++ + + PD TY I ++ C ND +AF ++D
Sbjct: 513 FSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDA 572
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
M L P V Y+ II L K +V EA E +M+ G++PD +Y + + +
Sbjct: 573 MEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGR 632
Query: 375 VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
+ A L+ + K P TY +++ +++G +K +
Sbjct: 633 IDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQ 673
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 140/340 (41%), Gaps = 56/340 (16%)
Query: 110 FQHSVESFHILVEILGSCKQ------FAILWDFLTEMRESSCCEINSDIFWFIFKAYSRA 163
F V+++ I+V L CK+ FAI+ D + E+ I S I + K
Sbjct: 543 FVPDVDTYLIVVNEL--CKKNDRDAAFAII-DAMEELGLRPTVAIYSSIIGSLGKQGRVV 599
Query: 164 NLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TY 222
A +F +M E GI+P + +++ + + +A + ++ HFL + TY
Sbjct: 600 E----AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTY 655
Query: 223 SILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS 282
++LISG+ K+G K + ML+ G +++ Y + K G + +F M
Sbjct: 656 TVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGE 715
Query: 283 KRVEPDAFTYSIFIH--------------------------------------TYCDAND 304
++ D Y + + +
Sbjct: 716 NDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGS 775
Query: 305 IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNA 364
A V+ K+++ +++PN++ +N II C +++EAY L+ M G+ P+ +Y
Sbjct: 776 KSFAMEVIGKVKK-SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTI 834
Query: 365 IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+ H + ++ A+ L E NC PD+ Y+ +LK L
Sbjct: 835 LMKSHIEAGDIESAIDL---FEGTNCEPDQVMYSTLLKGL 871
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%)
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
F+ TY I+++ K D A + AM + G + Y++ + +L K G V EA
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
F ML ++PD Y I I+TY I A +++++ + L P+ FTY +I
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
K +E+ + LD+M+ G+ P+ Y A+ H + + L M +++ D
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDH 722
Query: 395 HTYNMVLKLLIR 406
Y +L L R
Sbjct: 723 IAYITLLSGLWR 734
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 185 IHDFDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILISGWGKIGDSGKARELFQ 243
++ + L Y CKR +A+ FD + + + Y+ L+ + K + A L+
Sbjct: 237 VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYL 296
Query: 244 AMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAN 303
M+++ +D +N + K G +D+ +F M+ K V+ + FTY I I +YC
Sbjct: 297 RMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG 356
Query: 304 DIHSAFRV-LDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY 362
++ A R+ ++ ++ NV Y +I K +++A +LL M+ G+ PD +Y
Sbjct: 357 NVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 7/194 (3%)
Query: 202 KQAQQFFDQAKSHFL---LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYN 258
K+ Q + K L + K + S G G A E+ + P +L +N
Sbjct: 740 KKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIP-NLYLHN 798
Query: 259 NFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
+ C G +DEA N M + + P+ TY+I + ++ +A DI SA +D
Sbjct: 799 TIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESA---IDLFEGT 855
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
N P+ Y+ ++K LC + +A L+ EM G+ P+ SY + C A
Sbjct: 856 NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEA 915
Query: 379 LRLMSRMEKDNCFP 392
++++ M + +P
Sbjct: 916 VKVVKDMAALDIWP 929
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 89/221 (40%), Gaps = 19/221 (8%)
Query: 195 LCKRKHVKQAQQFFDQ--AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPV 252
LC H+ +A D + L Y L + K G + +A LF M G V
Sbjct: 211 LCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYV 270
Query: 253 DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
D + Y + CK + A ++ M+ + E D ++ IH + + +
Sbjct: 271 DKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMF 330
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC-- 370
+M + + NVFTY+ +I CK V+ A LR +T S + + HC
Sbjct: 331 SQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA--------LRLFVNNTGSEDISRNVHCYT 382
Query: 371 -------DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+ +A+ L+ RM + PD TY ++LK+L
Sbjct: 383 NLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKML 423
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 81/182 (44%), Gaps = 3/182 (1%)
Query: 204 AQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA 263
A + + K + ++ +I+G+ G +A ++M +G +L+ Y + +
Sbjct: 779 AMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKS 838
Query: 264 LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPN 323
+ G ++ A ++F EPD YS + CD A ++ +M++ + PN
Sbjct: 839 HIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPN 895
Query: 324 VFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMS 383
+Y +++ LC + EA +++ +M + P + ++ + C+ ++ A L +
Sbjct: 896 KDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFA 955
Query: 384 RM 385
M
Sbjct: 956 IM 957
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 133/344 (38%), Gaps = 51/344 (14%)
Query: 81 DLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEM 140
DL+ Q L G +A F W S F H+ E+ V+ G K F + + +++
Sbjct: 110 DLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKY 169
Query: 141 RE-SSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMD-EFGIKPTIHDFDMLLYFLCKR 198
+ + + S I + RA P F +M+ ++G+K +++ LC++
Sbjct: 170 KGIAGGKTLESAIDRLV-----RAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEK 224
Query: 199 KHVKQAQQFFDQAKSHFLLTAKTYSILISGW-------------GKIGDSG--KARELFQ 243
H A++ + +LISGW G++ G + +
Sbjct: 225 GHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYN 284
Query: 244 AMLD---------------------------QGCPVDLLAYNNFLDALCKGGCVDEATNI 276
MLD +G P + +N ++ LCK +EA +
Sbjct: 285 MMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTL 344
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNL--LPNVFTYNCIIKRL 334
F M +PDA TY + I + A I ++DKM+ L N Y +K L
Sbjct: 345 FGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKIL 404
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
C +++E A + M G KP +Y+ + C + +++RA
Sbjct: 405 CGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRA 448
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 11/231 (4%)
Query: 194 FLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAML-DQGCPV 252
+ +RK K + + K + KT I + G + + F+ M D G
Sbjct: 152 YFGRRKDFKGMLEIISKYKG--IAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKR 209
Query: 253 DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
D + + LC+ G A + + + + PD + I +C A + A R+
Sbjct: 210 DKESLTLVVKKLCEKGHASIAEKMVKNT-ANEIFPDENICDLLISGWCIAEKLDEATRLA 268
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL-------LDEMILRGVKPDTWSYNAI 365
+M R YN ++ +CK + ++ ++L L EM RGV +T ++N +
Sbjct: 269 GEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVL 328
Query: 366 QAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ C A+ L RM + C PD TY ++++ L + R + E+
Sbjct: 329 INNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEM 379
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 2/199 (1%)
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML 281
Y LI GK KA ELFQ M+++GC V+ Y + A + G D A + M
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 282 SK-RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
S +PD TYSI I ++ +L MRR + PN TYN +I K
Sbjct: 213 SSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMF 272
Query: 341 EEAYELLDEMILR-GVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
E L +M+ KPD+W+ N+ + ++ + + P+ T+N+
Sbjct: 273 VEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNI 332
Query: 400 VLKLLIRIGRFDKATEVWE 418
+L + G + K + V E
Sbjct: 333 LLDSYGKSGNYKKMSAVME 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 4/225 (1%)
Query: 110 FQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGA 169
++ +V + L+ +LG CKQ + EM C +N +++ + AYSR+ D A
Sbjct: 146 YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCV-VNHEVYTALVSAYSRSGRFDAA 204
Query: 170 IRSFLRM-DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILIS 227
RM +P +H + +L+ + + Q D + TY+ LI
Sbjct: 205 FTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLID 264
Query: 228 GWGKIGDSGKARE-LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
+GK + L Q + + C D N+ L A G ++ N + S +E
Sbjct: 265 AYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIE 324
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
P+ T++I + +Y + + V++ M++ + + TYN +I
Sbjct: 325 PNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI 369
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 111/257 (43%), Gaps = 3/257 (1%)
Query: 111 QHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAI 170
Q V ++ IL++ F + D L++MR N+ + + AY +A +
Sbjct: 218 QPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI-RPNTITYNTLIDAYGKAKMFVEME 276
Query: 171 RSFLRM-DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISG 228
+ ++M E KP + L ++ + +++ +S + +T++IL+
Sbjct: 277 STLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDS 336
Query: 229 WGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPD 288
+GK G+ K + + M ++ YN +DA + G + + +F M S+R+ P
Sbjct: 337 YGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPS 396
Query: 289 AFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
T + Y A+ VL + ++ ++ +NC++ + +K E +L+
Sbjct: 397 CVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLE 456
Query: 349 EMILRGVKPDTWSYNAI 365
M +G KPD +Y +
Sbjct: 457 LMEKKGFKPDKITYRTM 473
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 282 SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR-RCNLLPNVFTYNCIIKRLCKNDKV 340
SK++ P S+ H A SA +V + +R + PNV Y +I L K +
Sbjct: 109 SKKLLPRTVLESL--HERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQP 166
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKD-NCFPDRHTYNM 399
E+A+EL EMI G + Y A+ + + A L+ RM+ NC PD HTY++
Sbjct: 167 EKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSI 226
Query: 400 VLKLLIRIGRFDKATEV 416
++K +++ FDK ++
Sbjct: 227 LIKSFLQVFAFDKVQDL 243
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
ELF+ M +G + + Y + L + G D A IF +M+S V PD TY+I +
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 300 CDANDIHSAF---RVLD------KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
C + A +V D + + PNV TY +I CK EEAY L +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRF 410
G PD+ +YN + H + + + L+ M D TY +V +L GR
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRL 180
Query: 411 DKA 413
DK
Sbjct: 181 DKG 183
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
Query: 207 FFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
F + ++ + TY+ LI G + GD A+E+F+ M+ G P D++ YN LD LCK
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK 63
Query: 267 ---------GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
G V++ ++F + K V+P+ TY+ I +C A+ + KM+
Sbjct: 64 NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKE 123
Query: 318 CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
LP+ TYN +I+ ++ + EL+ EM
Sbjct: 124 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 164/407 (40%), Gaps = 63/407 (15%)
Query: 69 LSLNQFSAQISSDLVEQVLKRCKN--LGFSAHRFFLWAKSIPGFQHSVESFHILVEILGS 126
LS S +S L+E +L R KN A FF W+ +H ++S+ + + IL
Sbjct: 66 LSTKFSSIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVK 125
Query: 127 CK-----QFAILWDFLTEMRESSCC-------EINSD---IFWFIFKAYSRANLPDGAIR 171
+ + I L +S EI+S +F + + Y++ +
Sbjct: 126 ARLLIDARALIESSLLNSPPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFD 185
Query: 172 SFLRMDEFGIKPTIHDFDMLLYF-----------------------------------LC 196
F R+ + G ++ + L+++ LC
Sbjct: 186 VFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLC 245
Query: 197 KRKHVKQAQQFFDQA------KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGC 250
K +K+ D+ S + T+ + +L +I +S L + +L +
Sbjct: 246 KEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEM--RIEES---MSLLKRLLMKNM 300
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
VD + Y+ + A K G + A +F +ML + ++F Y++F+ C+ D+ A R
Sbjct: 301 VVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAER 360
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
+L +M + P T+NC+I + E+ E + M+ RG+ P ++N +
Sbjct: 361 LLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVS 420
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
V+RA ++++ PD HTY+ +++ I D+A +++
Sbjct: 421 KIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLF 467
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 3/218 (1%)
Query: 151 DIFWFIFKAYSRANLPD--GAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
D + Y++A D A + F M + G + + + C++ VK+A++
Sbjct: 303 DTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLL 362
Query: 209 DQ-AKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
+ +S +T++ LI G+ + G K E + M+ +G A+N + ++ K
Sbjct: 363 SEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKI 422
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
V+ A I + K PD TYS I + + NDI A ++ +M + P +
Sbjct: 423 ENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVF 482
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
+I LC KVE + L M R ++P+ Y+A+
Sbjct: 483 RSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDAL 520
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 35/231 (15%)
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML 281
YSI++ K GD AR++F ML +G + Y F+ C+ G V EA + +M
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEME 366
Query: 282 SKRVEPDAFTYSIFIH------------TYCDA-------------NDIHSAFRVLDKMR 316
V P T++ I YC+ N++ + ++ +
Sbjct: 367 ESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVN 426
Query: 317 RCN----------LLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQ 366
R N +P+ TY+ +I+ + + +++A +L EM R + P + ++
Sbjct: 427 RANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLI 486
Query: 367 AHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
C +V + + M+K P+ Y+ ++K +IG A V+
Sbjct: 487 VGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVY 537
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 155 FIFKAYSRANLPDGAIRSFLR----MDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ 210
F++ + R G ++ R M+E G+ P F+ L+ + ++ ++ +
Sbjct: 340 FVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEV 399
Query: 211 AKSHFLL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGC 269
+ L+ + ++ ++ KI + +A E+ +D+G D Y++ + +G
Sbjct: 400 MVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGND 459
Query: 270 VDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNC 329
+D+A +F++M +++ P + I C + + + L M++ + PN Y+
Sbjct: 460 IDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDA 519
Query: 330 IIKRLCKNDKVEEAYELLDEMI 351
+IK K A + +EMI
Sbjct: 520 LIKAFQKIGDKTNADRVYNEMI 541
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 2/200 (1%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TY+ ++S + G +AR++ M G P + + YN L CK +D A ++ +M
Sbjct: 454 TYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM 513
Query: 281 LS-KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
+EPD +Y+I I +D A ++MR + P +Y ++K + +
Sbjct: 514 TEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQ 573
Query: 340 VEEAYELLDEMILRG-VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYN 398
+ A + DEM+ VK D ++N + +C + A R++SRM+++ +P+ TY
Sbjct: 574 PKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYG 633
Query: 399 MVLKLLIRIGRFDKATEVWE 418
+ + + + A +W+
Sbjct: 634 SLANGVSQARKPGDALLLWK 653
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 106/270 (39%), Gaps = 22/270 (8%)
Query: 153 FWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAK 212
+ + A+ A L D A + M G+ +++LL CK+ + +A+ +
Sbjct: 455 YTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMT 514
Query: 213 SHFLLTAK--TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
+ +Y+I+I G I DS A F M +G ++Y + A G
Sbjct: 515 EDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQP 574
Query: 271 DEATNIFHDMLS-KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNC 329
A +F +M++ RV+ D +++ + YC I A RV+ +M+ PNV TY
Sbjct: 575 KLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGS 634
Query: 330 I-------------------IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
+ IK C K E + + +KPD + +
Sbjct: 635 LANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICV 694
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
+AL +++ ME++ P++ Y +
Sbjct: 695 RAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 5/207 (2%)
Query: 215 FLLTAKTYSILISGW---GKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
F ++ Y+ L+ G+ G++ D+ + E + D+ D + Y + A G +D
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR-CNLLPNVFTYNCI 330
A + +M V + TY++ + YC I A +L +M + P+V +YN I
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKD-N 389
I D A +EM RG+ P SY + + A R+ M D
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 390 CFPDRHTYNMVLKLLIRIGRFDKATEV 416
D +NM+++ R+G + A V
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRV 616
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 257 YNNFLDALCKGGCVDEATNIFHDML---SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
Y + K G V + + M + PD TY+ + + +A + A +VL
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 314 KMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL-RGVKPDTWSYNAIQAHHCDH 372
+M R + N TYN ++K CK +++ A +LL EM G++PD SYN I D
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII----IDG 532
Query: 373 C----EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
C + + AL + M P + +Y ++K G+ A V++
Sbjct: 533 CILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFD 582
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC---NLLPNVFTYNCIIKRLCK 336
+L K PD+ Y+ + Y + R+L+ MRR N P+ TY ++
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 337 NDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF-PDRH 395
++ A ++L EM GV + +YN + +C ++ RA L+ M +D PD
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 396 TYNMVL 401
+YN+++
Sbjct: 525 SYNIII 530
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
+F+ M + +D YN + LCK G DEA NIF ++L ++PD TY++ I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR--- 57
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
+ + A ++ +M R L+P+ TYN +I LCK +K+ +A R V
Sbjct: 58 -FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
++N + +C V + L M + + TY ++ ++G F+ A ++++
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQ 165
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTA-----KTYSILIS 227
F M E + ++++++ LCK +A F ++ L++ +TY+++I
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIF----TNLLISGLQPDVQTYNMMI- 56
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+ G+A +L+ M+ +G D + YN+ + LCK + +A ++V
Sbjct: 57 ---RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSK 104
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
T++ I+ YC A + + +M R ++ NV TY +I + A ++
Sbjct: 105 SCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIF 164
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLM 382
EM+ GV + ++ I C E+ +A+ ++
Sbjct: 165 QEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 140 MRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRK 199
MRES+ ++++ + I +A D A F + G++P + ++M++ F
Sbjct: 5 MRESNM-DMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----S 59
Query: 200 HVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYN 258
+ +A++ + + L+ TY+ +I G K +AR++ + C +N
Sbjct: 60 SLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV-----SKSCS----TFN 110
Query: 259 NFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
++ CK V + N+F +M + + + TY+ IH + D ++A + +M
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
+ + T+ I+ +LC ++ +A +L
Sbjct: 171 GVYSSSITFRDILPQLCSRKELRKAVAML 199
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%)
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
+F+ + D+G D + Y + C+ G + A ++ +M+ K + P+ F Y++ IH +
Sbjct: 305 IFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHF 364
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
+I ++M R + + N +IK C + K +EA+E+ M GV P+
Sbjct: 365 KRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAI 424
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLL 404
+YNA+ C +V + L+L ++ P Y +++ L
Sbjct: 425 TYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 183 PTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKT-YSILISGWGKIGDSGKAREL 241
P+++ + ++ LC K +A F K + Y+ +I G+ + G G AR+L
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
+ M+ +G + AYN + K G + +++ML + + I +C
Sbjct: 341 WFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCS 400
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
AF + M + PN TYN +IK CK +KVE+ +L E+ G+KP +
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMA 460
Query: 362 YNAI 365
Y A+
Sbjct: 461 YAAL 464
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 1/229 (0%)
Query: 191 LLYFLCKRKHVKQAQQFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQG 249
L+ LC V + + Q L + Y+ LISG+ +IG+ E+ M+
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 250 CPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAF 309
+ Y + LC EA IF ++ K PD Y+ I +C+ + SA
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 310 RVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHH 369
++ +M + + PN F YN +I K ++ +EM+ G S N +
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 370 CDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
C H + A + M + P+ TYN ++K + + +K ++++
Sbjct: 399 CSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYK 447
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQ-FFDQAKSHFLLTAKTYSILISGWGK 231
F + + G P + ++ C++ + A++ +F+ K Y+++I G K
Sbjct: 306 FKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFK 365
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
G+ + ML G +L+ N + C G DEA IF +M V P+A T
Sbjct: 366 RGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAIT 425
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
Y+ I +C N + ++ +++ L P+ Y +++ L +D V + L
Sbjct: 426 YNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 136/343 (39%), Gaps = 22/343 (6%)
Query: 85 QVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESS 144
++LK N+ FS FF W S + S +IL L K FL +++
Sbjct: 85 ELLKSQNNVLFSLW-FFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFL----DTT 139
Query: 145 CCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFD-MLLYFLCKRK---- 199
+ + K S L + AI + + + GI ++ + +LL L RK
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 200 ---HVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLA 256
H + + FD + L+ A L G GD + EL + L QG
Sbjct: 200 WELHKEMVESEFDSERIRCLIRA-----LCDG----GDVSEGYELLKQGLKQGLDPGQYV 250
Query: 257 YNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR 316
Y + C+ G + + H M++ P + Y I C A+ + ++
Sbjct: 251 YAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLK 310
Query: 317 RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVS 376
P+ Y +I+ C+ + A +L EMI +G++P+ ++YN + H E+S
Sbjct: 311 DKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEIS 370
Query: 377 RALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ M ++ + N ++K G+ D+A E+++N
Sbjct: 371 LVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 113/238 (47%), Gaps = 3/238 (1%)
Query: 182 KPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSI-LISGWGKIGDSGKARE 240
+ I +D + L K + ++ ++ K + ++ + ++ +IS +GK G A++
Sbjct: 71 RTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQK 130
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK-RVEPDAFTYSIFIHTY 299
+F+ M ++ C +L++N L A D +F+++ K ++PD +Y+ I
Sbjct: 131 VFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKAL 190
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
C+ + + A +LD++ L P++ T+N ++ + E E+ +M+ + V D
Sbjct: 191 CEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDI 250
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+YNA + + + L ++ PD ++N +++ I G+ D+A E W
Sbjct: 251 RTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEA-EAW 307
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 121/289 (41%), Gaps = 27/289 (9%)
Query: 83 VEQVLKRCKNL------GFSAHRFFLWAKS------------IPGF--QHSVESFHILVE 122
VE++L+ K GF+A L+ K+ +P + SV SF+ L+
Sbjct: 93 VEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLS 152
Query: 123 ILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAY-SRANLPDGAIRSFLRMDEF 179
K+F ++ + E+ I DI + + KA + +LP+ A+ ++
Sbjct: 153 AYRLSKKFDVVEELFNEL--PGKLSIKPDIVSYNTLIKALCEKDSLPE-AVALLDEIENK 209
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSHFLLTAKTYSILISGWGKIGDSGKA 238
G+KP I F+ LL + + ++ + + + + + +TY+ + G S +
Sbjct: 210 GLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKEL 269
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
LF + G D+ ++N + G +DEA + +++ PD T+++ +
Sbjct: 270 VNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPA 329
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
C A D SA + + L T ++ L K K EEA E++
Sbjct: 330 MCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 110/265 (41%), Gaps = 6/265 (2%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLL--YFLCKRKHVKQAQQFFDQAKS 213
I Y +A + + A + F M K ++ F+ LL Y L K+ V ++ F++
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDV--VEELFNELPG 172
Query: 214 HFLLTAK--TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVD 271
+ +Y+ LI + +A L + ++G D++ +N L + G +
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFE 232
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
I+ M+ K V D TY+ + + + +++ L P+VF++N +I
Sbjct: 233 LGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMI 292
Query: 332 KRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
+ K++EA E++ G +PD ++ + C + A+ L
Sbjct: 293 RGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Query: 392 PDRHTYNMVLKLLIRIGRFDKATEV 416
+ T ++ L++ + ++A E+
Sbjct: 353 VGQTTLQQLVDELVKGSKREEAEEI 377
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 2/241 (0%)
Query: 178 EFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILISGWGKIGDSG 236
+ G+ P D+ + L K + +A++ + S F + LI + D
Sbjct: 286 KLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAV-DPD 344
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
A E M+ G + + LC+ D + + SK + +YS+ I
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
C A + ++ L +M++ L P+V YN +I+ CK + + A +L DEM + G K
Sbjct: 405 SFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCK 464
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ +YN + + E +LRL +M + PD Y +++ L + + + A EV
Sbjct: 465 MNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEV 524
Query: 417 W 417
+
Sbjct: 525 F 525
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 12/232 (5%)
Query: 137 LTEMRE------SSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDM 190
LTE +E S +++DI + + S + PD A+ + M G P I
Sbjct: 309 LTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVD-PDSAVEFLVYMVSTGKLPAIRTLSK 367
Query: 191 LLYFLC---KRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLD 247
L LC K H+ +A + +K +F ++YS++IS K G ++ Q M
Sbjct: 368 LSKNLCRHDKSDHLIKAYELL-SSKGYFS-ELQSYSLMISFLCKAGRVRESYTALQEMKK 425
Query: 248 QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHS 307
+G D+ YN ++A CK + A ++ +M + + + TY++ I + +
Sbjct: 426 EGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEE 485
Query: 308 AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
+ R+ DKM + P+ Y +I+ LCK K+E A E+ + + R K T
Sbjct: 486 SLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVT 537
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
KA EL + +G +L +Y+ + LCK G V E+ +M + + PD Y+ I
Sbjct: 383 KAYELLSS---KGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALI 439
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
C A I A ++ D+M N+ TYN +I++L + + EE+ L D+M+ RG++
Sbjct: 440 EACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIE 499
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSR-MEKD 388
PD Y ++ C ++ A+ + + ME+D
Sbjct: 500 PDETIYMSLIEGLCKETKIEAAMEVFRKCMERD 532
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 2/214 (0%)
Query: 207 FFDQAKSH-FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
F Q KS+ LL + Y LI + A + + G + N L L
Sbjct: 104 LFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLT 163
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNL-LPNV 324
GC D A +F M K V + + ++I +C +++ + R++D++++ NL +
Sbjct: 164 SDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGS 223
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
I+ LCK + +A+ +L+E+ KPD +Y I + ++ +
Sbjct: 224 IIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKK 283
Query: 385 MEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
K P Y + LI R +A EV E
Sbjct: 284 KRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAE 317
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 11/188 (5%)
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV-----DEATNIFHDMLSKRVEPDAFT 291
+A+E+ + ++ P+D N+ LDAL G V D A M+S P T
Sbjct: 311 EAKEVAEVIVSGKFPMD----NDILDALI--GSVSAVDPDSAVEFLVYMVSTGKLPAIRT 364
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
S C + + + + + +Y+ +I LCK +V E+Y L EM
Sbjct: 365 LSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMK 424
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
G+ PD YNA+ C + A +L M + C + TYN++++ L G +
Sbjct: 425 KEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAE 484
Query: 412 KATEVWEN 419
++ +++
Sbjct: 485 ESLRLFDK 492
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 140/308 (45%), Gaps = 17/308 (5%)
Query: 116 SFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFW-FIFKAYSRANLPDGAIRSFL 174
+ + V+ L ++F+ + + + + +I ++ F + ++Y RA++ D A++ F
Sbjct: 69 AMELTVQRLAKSQRFSDIEALIESHKNNP--KIKTETFLSTLIRSYGRASMFDHAMKMFE 126
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFD---QAKSHFLLTAKTYSILISGWGK 231
MD+ G T+ F+ LL ++ Q FD Q ++ +Y +LI +
Sbjct: 127 EMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCD 186
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFT 291
G KA E+ + M +G V ++A+ L +L K G VDEA +++ +M++K + D
Sbjct: 187 SGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTV 246
Query: 292 YSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA---YELLD 348
Y++ + + ++++M L P+ +YN ++ C + EA YE L+
Sbjct: 247 YNVRLMNAAKESP-ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE 305
Query: 349 EMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
+ P+ ++ + H C + + L + + + PD T + + L++
Sbjct: 306 Q-------PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNN 358
Query: 409 RFDKATEV 416
R + A V
Sbjct: 359 RMEDARGV 366
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 6/259 (2%)
Query: 166 PDGAIRSFLRMDEFGIKPTIHDFDMLLYF--LCKRKHVKQAQQFFDQAKSHFLLTAKTY- 222
PD A+ + + P + M L L K + + + K++ + +T+
Sbjct: 46 PDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFL 105
Query: 223 SILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLS 282
S LI +G+ A ++F+ M G P ++++N L A + +F +
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQ 165
Query: 283 K--RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ + PD +Y + I +YCD+ A ++ M + + + I+ L KN V
Sbjct: 166 RYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLV 225
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
+EA L EM+ +G D YN ++ + R LM M PD +YN +
Sbjct: 226 DEAESLWIEMVNKGCDLDNTVYN-VRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYL 284
Query: 401 LKLLIRIGRFDKATEVWEN 419
+ G +A +V+E
Sbjct: 285 MTAYCVKGMMSEAKKVYEG 303
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 148/362 (40%), Gaps = 52/362 (14%)
Query: 82 LVEQVLKRCKNLG-FSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEM 140
L ++L+ C N G A + G + + ++ + C + F M
Sbjct: 183 LFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRM 242
Query: 141 RESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKH 200
RE NS + AY + + A+ M++ GI P + +++L+ +
Sbjct: 243 RERDVIAWNS-----VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 201 VKQAQQFFDQAKSHFLLTAK--TYSILISGWGKIGDSGKARELFQAM------------- 245
A + ++ F +TA T++ +ISG G +A ++F+ M
Sbjct: 298 CDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 246 -----------LDQGCPV-----------DLLAYNNFLDALCKGGCVDEATNIFHDMLSK 283
++QG V D+L N+ +D K G +++A +F + +K
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
D +T++ I YC A A+ + +M+ NL PN+ T+N +I KN EA
Sbjct: 417 ----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 344 YELLDEMILRG-VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
+L M G V+ +T ++N I A + + + AL L +M+ P+ T +L
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT---ILS 529
Query: 403 LL 404
LL
Sbjct: 530 LL 531
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 124/294 (42%), Gaps = 11/294 (3%)
Query: 125 GSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPT 184
G + ++ + ++ SSC +++ I Y++ D A + F RM E +
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVSNSIL----AVYAKCGELDFATKFFRRMRE---RDV 247
Query: 185 IHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQA 244
I +LL + KH + + + K T++ILI G+ ++G A +L Q
Sbjct: 248 IAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQK 307
Query: 245 MLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAND 304
M G D+ + + L G +A ++F M V P+A T +
Sbjct: 308 METFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKV 367
Query: 305 IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNA 364
I+ V + + +V N ++ K K+E+A ++ D + D +++N+
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV----KNKDVYTWNS 423
Query: 365 IQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+ +C +A L +RM+ N P+ T+N ++ I+ G +A ++++
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ 477
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
+++ + K G+ A + F+ M ++ D++A+N+ L A C+ G +EA + +M +
Sbjct: 222 ILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+ P T++I I Y +A ++ KM + +VFT+ +I L N +A
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 345 ELLDEMILRGVKPDTWS-YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
++ +M L GV P+ + +A+ A C +++ + S K D N ++ +
Sbjct: 338 DMFRKMFLAGVVPNAVTIMSAVSACSCLKV-INQGSEVHSIAVKMGFIDDVLVGNSLVDM 396
Query: 404 LIRIGRFDKATEVWEN 419
+ G+ + A +V+++
Sbjct: 397 YSKCGKLEDARKVFDS 412
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 19/186 (10%)
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT----NIFHDMLSKRVEPDAFTY 292
+A + ++ QG V Y L++ C+D + I H EPD F
Sbjct: 64 EAEKALDSLFQQGSKVKRSTYLKLLES-----CIDSGSIHLGRILHARFGLFTEPDVFVE 118
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
+ + Y I A +V D MR NL FT++ +I + ++ E +L M+
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 353 RGVKPDTWSYNAI--QAHHCDHCEVSRAL-RLMSRMEKDNCFPDRHTYNMVLKLLIRIGR 409
GV PD + + I +C E + + ++ ++ +C N +L + + G
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCL---RVSNSILAVYAKCGE 231
Query: 410 FDKATE 415
D AT+
Sbjct: 232 LDFATK 237
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 142/322 (44%), Gaps = 12/322 (3%)
Query: 103 WAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSR 162
W + SV ++++++ + KQF I EMR+ + + + + ++ +
Sbjct: 144 WVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAP-DRYTYSTLITSFGK 202
Query: 163 ANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYF----LCKR--KHVKQAQQFFDQAKSHFL 216
+ D A+ +M++ + D++LY L +R + K F +S
Sbjct: 203 EGMFDSALSWLQKMEQDRVSG-----DLVLYSNLIELSRRLCDYSKAISIFSRLKRSGIT 257
Query: 217 LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNI 276
Y+ +I+ +GK +AR L + M + G + ++Y+ L + EA ++
Sbjct: 258 PDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSV 317
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
F +M D T +I I Y + + A R+ +R+ ++ PNV +YN I++ +
Sbjct: 318 FAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGE 377
Query: 337 NDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
+ EA L M + ++ + +YN + + E +A L+ M+ P+ T
Sbjct: 378 AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAIT 437
Query: 397 YNMVLKLLIRIGRFDKATEVWE 418
Y+ ++ + + G+ D+A +++
Sbjct: 438 YSTIISIWGKAGKLDRAATLFQ 459
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 18/330 (5%)
Query: 95 FSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSC------CEI 148
F R + + G + S+ L+ + +F EM+E +C C I
Sbjct: 276 FREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNI 335
Query: 149 NSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF 208
D+ Y + ++ A R F + + I+P + ++ +L + + +A F
Sbjct: 336 MIDV-------YGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 209 D-QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKG 267
+ TY+ +I +GK + KA L Q M +G + + Y+ + K
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Query: 268 GCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTY 327
G +D A +F + S VE D Y I Y + A R+L +++ LP+
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPR 504
Query: 328 NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
I L K + EEA + + G D + + + + + + +M
Sbjct: 505 ETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRT 564
Query: 388 DNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
FPD + MVL + F+KA V+
Sbjct: 565 AGYFPDSNVIAMVLNAYGKQREFEKADTVY 594
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 112/263 (42%), Gaps = 5/263 (1%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-H 214
+ Y +A L A M+E G+ P + LL + +A F + K +
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
L T +I+I +G++ +A LF ++ ++++YN L + EA
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
++F M K +E + TY+ I Y + A ++ +M+ + PN TY+ II
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW 445
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
K K++ A L ++ GV+ D Y + + + A RL+ ++ PD
Sbjct: 446 GKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDN 501
Query: 395 HTYNMVLKLLIRIGRFDKATEVW 417
+ +L + GR ++AT V+
Sbjct: 502 IPRETAITILAKAGRTEEATWVF 524
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 104/294 (35%), Gaps = 34/294 (11%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
I + Y A L AI F M I+ + ++ ++ K ++A + +S
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 216 LL-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA----------- 263
+ A TYS +IS WGK G +A LFQ + G +D + Y + A
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 490
Query: 264 --------------------LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDAN 303
L K G +EAT +F D + I+ Y
Sbjct: 491 RLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQ 550
Query: 304 DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG-VKPDTWSY 362
+ V +KMR P+ ++ K + E+A + EM G V PD +
Sbjct: 551 RYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHF 610
Query: 363 NAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ + + L R+E D + + +V L R + + A+ V
Sbjct: 611 QMLSLYSSKK-DFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRV 663
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%)
Query: 248 QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHS 307
+G D Y LD + G + ++FH M K V D TY+ IH + D+
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 308 AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQA 367
A R+ ++MR P V +Y +K L + +VEEA E+ EM+ V P+ +Y +
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 368 HHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
+ + AL + +M++ PD+ N+++ ++ G T V
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRV 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 84/191 (43%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TY+ ++ +G+ G +F M ++G +D + Y + + + G VD A ++ +M
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
EP +Y+ ++ + A V +M R + PN TY +++ L K
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
EEA ++ +M GV+PD + N + A E S R++ M+++ +
Sbjct: 244 EEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEA 303
Query: 401 LKLLIRIGRFD 411
L+ L G D
Sbjct: 304 LETLKAAGESD 314
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 216 LLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
L+ TY+ LI GD A L++ M D GC +++Y ++ L G V+EAT
Sbjct: 154 LIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATE 213
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
++ +ML RV P+ TY++ + A + KM+ + P+ N +I +
Sbjct: 214 VYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKAL 273
Query: 336 K 336
K
Sbjct: 274 K 274
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 148/386 (38%), Gaps = 52/386 (13%)
Query: 24 FQHKQNCHHFHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHD-LELSLNQFSAQISSDL 82
F K +LP P V+ D+VS I ++ ++ + D + L + S +
Sbjct: 38 FSQKPKLVKTQTLPDPSVYTR---DIVSNIYNIL---KYSNWDSAQEQLPHLGVRWDSHI 91
Query: 83 VEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRE 142
+ +VLK + A FF WA I GF+H ++ +++I G + ++ M+E
Sbjct: 92 INRVLKAHPPMQ-KAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKE 150
Query: 143 SSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVK 202
I++ + + S + DGA+R + M + G +PT+ + + L V+
Sbjct: 151 KGVL-IDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVE 209
Query: 203 QAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFL 261
+A + + + +S TY++L+ G +A ++F M + G D A N +
Sbjct: 210 EATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
Query: 262 DALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLL 321
K G T + M V Y IF+ + +A D +R N
Sbjct: 270 AKALKFGETSFMTRVLVYMKENGV---VLRYPIFVEAL---ETLKAAGESDDLLREVN-- 321
Query: 322 PNVFTYNCIIKRLCKNDKVEEAYE-----------------------------LLDEMIL 352
+ ++ LC +D E LL++M
Sbjct: 322 -----SHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDILLNQMRD 376
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRA 378
R +K D++ +AI +CD C A
Sbjct: 377 RNIKLDSFVVSAIIETNCDRCRTEGA 402
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 6/237 (2%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILISGWGKIGDSGKARELFQAML 246
+ L+ + K+ + A F + K S A Y+ LI+ D KA E + L
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 247 D-----QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
D + C +++ YN L A + G VD+ +F D+ V PD +T++ + Y
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
I VL +MR P++ T+N +I K + E+ + ++ KP +
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+N++ ++ + +A + +M N P TY ++ + G +A E++E
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE 372
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
Query: 240 ELFQAMLDQGCPV-DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI-- 296
E+F+ M Q + D Y+ + + K G A +F +M + PDA Y+ I
Sbjct: 118 EVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA 177
Query: 297 --HTYCDANDIHSAFRVLDKMR---RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
HT A + LDKM+ RC PNV TYN +++ ++ KV++ L ++
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQ--PNVVTYNILLRAFAQSGKVDQVNALFKDLD 235
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
+ V PD +++N + + + + +++RM + C PD T+N+++ + F+
Sbjct: 236 MSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFE 295
Query: 412 KATEVWEN 419
K + +++
Sbjct: 296 KMEQTFKS 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
Query: 114 VESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIR 171
V +F+ +++ G + LT MR + C DI F + +Y + + +
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC---KPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 172 SFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILISGWG 230
+F + KPT+ F+ ++ K + + +A+ F + +++ + TY +I +G
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 231 KIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAF 290
G +ARE+F+ + + + N L+ C+ G EA +FH+ + RV PDA
Sbjct: 360 YCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAS 419
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPN 323
TY Y A+ ++ KM + ++PN
Sbjct: 420 TYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 110/261 (42%), Gaps = 1/261 (0%)
Query: 136 FLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFL 195
+L +M+ C+ N + + +A++++ D F +D + P ++ F+ ++
Sbjct: 194 YLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253
Query: 196 CKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDL 254
K +K+ + + +S+ T+++LI +GK + K + F++++ L
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTL 313
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
+N+ + K +D+A +F M P TY I Y + A + ++
Sbjct: 314 PTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEE 373
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE 374
+ + + T N +++ C+N EA +L V PD +Y + +
Sbjct: 374 VGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADM 433
Query: 375 VSRALRLMSRMEKDNCFPDRH 395
+ LM +MEKD P++
Sbjct: 434 KEQVQILMKKMEKDGIVPNKR 454
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 117/294 (39%), Gaps = 11/294 (3%)
Query: 117 FHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGA---IRSF 173
+ L+ ++G Q + +EM+ S C ++ ++ + A+ A +R +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGC-RPDASVYNALITAHLHTRDKAKALEKVRGY 194
Query: 174 LRMDEF-GI---KPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISG 228
L D+ GI +P + +++LL + V Q F D S T++ ++
Sbjct: 195 L--DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDA 252
Query: 229 WGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPD 288
+GK G + + M C D++ +N +D+ K ++ F ++ + +P
Sbjct: 253 YGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPT 312
Query: 289 AFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
T++ I Y A I A V KM N +P+ TY C+I V A E+ +
Sbjct: 313 LPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE 372
Query: 349 EMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
E+ + NA+ +C + A +L PD TY + K
Sbjct: 373 EVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 98/212 (46%), Gaps = 2/212 (0%)
Query: 206 QFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
Q F+ + H ++ TYS I G + KA E++Q++ D+ +++ N+ L L
Sbjct: 119 QLFEWMQQHGKISVSTYSSCIKFVGA-KNVSKALEIYQSIPDESTKINVYICNSILSCLV 177
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA-NDIHSAFRVLDKMRRCNLLPNV 324
K G +D +F M ++PD TY+ + N A ++ ++ + +
Sbjct: 178 KNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDS 237
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSR 384
Y ++ N + EEA + +M + G P+ + Y+++ + + +A LM+
Sbjct: 238 VMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTE 297
Query: 385 MEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
M+ P++ +LK+ I+ G FD++ E+
Sbjct: 298 MKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 329
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%)
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDML 281
YS L++ + GD KA EL M G + + L KGG D + + ++
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 282 SKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVE 341
S + Y + + A + A + D M+ + + + + +I LC++ + +
Sbjct: 335 SAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFK 394
Query: 342 EAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
EA EL + K D N + +C E+ +R+M +M++ PD +T+++++
Sbjct: 395 EAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Query: 402 KLLIR 406
K I+
Sbjct: 455 KYFIK 459
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 2/250 (0%)
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILIS 227
A+ + + + K ++ + +L L K + + FDQ K L TY+ L++
Sbjct: 150 ALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLA 209
Query: 228 GWGKIGDS-GKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
G K+ + KA EL + G +D + Y L G +EA N M +
Sbjct: 210 GCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS 269
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
P+ + YS +++Y D A ++ +M+ L+PN ++K K + + EL
Sbjct: 270 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 329
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
L E+ G + Y + ++ A + M+ D + ++++ L R
Sbjct: 330 LSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCR 389
Query: 407 IGRFDKATEV 416
RF +A E+
Sbjct: 390 SKRFKEAKEL 399
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 36/216 (16%)
Query: 175 RMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTY-SILISGWGKIG 233
+M G P I+ + LL + K+A + + KS L+ K + L+ + K G
Sbjct: 262 QMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGG 321
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
++REL + G + + Y +D L K G ++EA +IF DM K V D + S
Sbjct: 322 LFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANS 381
Query: 294 IFIHT-----------------------------------YCDANDIHSAFRVLDKMRRC 318
I I YC A ++ S R++ KM
Sbjct: 382 IMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQ 441
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
+ P+ T++ +IK K AY+ +M +G
Sbjct: 442 AVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 6/237 (2%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAK-SHFLLTAKTYSILISGWGKIGDSGKARELFQAML 246
+ L+ + K+ + A F + K S A Y+ LI+ D KA E + L
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 247 D-----QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
D + C +++ YN L A + G VD+ +F D+ V PD +T++ + Y
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
I VL +MR P++ T+N +I K + E+ + ++ KP +
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
+N++ ++ + +A + +M N P TY ++ + G +A E++E
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE 372
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
Query: 240 ELFQAMLDQGCPV-DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI-- 296
E+F+ M Q + D Y+ + + K G A +F +M + PDA Y+ I
Sbjct: 118 EVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA 177
Query: 297 --HTYCDANDIHSAFRVLDKMR---RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
HT A + LDKM+ RC PNV TYN +++ ++ KV++ L ++
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQ--PNVVTYNILLRAFAQSGKVDQVNALFKDLD 235
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
+ V PD +++N + + + + +++RM + C PD T+N+++ + F+
Sbjct: 236 MSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFE 295
Query: 412 KATEVWEN 419
K + +++
Sbjct: 296 KMEQTFKS 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
Query: 114 VESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIR 171
V +F+ +++ G + LT MR + C DI F + +Y + + +
Sbjct: 243 VYTFNGVMDAYGKNGMIKEMEAVLTRMRSNEC---KPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 172 SFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HFLLTAKTYSILISGWG 230
+F + KPT+ F+ ++ K + + +A+ F + +++ + TY +I +G
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 231 KIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAF 290
G +ARE+F+ + + + N L+ C+ G EA +FH+ + RV PDA
Sbjct: 360 YCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAS 419
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPN 323
TY Y A+ ++ KM + ++PN
Sbjct: 420 TYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 112/270 (41%), Gaps = 1/270 (0%)
Query: 127 CKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIH 186
K + +L +M+ C+ N + + +A++++ D F +D + P ++
Sbjct: 185 AKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 187 DFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILISGWGKIGDSGKARELFQAM 245
F+ ++ K +K+ + + +S+ T+++LI +GK + K + F+++
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 246 LDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDI 305
+ L +N+ + K +D+A +F M P TY I Y +
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 306 HSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
A + +++ + + T N +++ C+N EA +L V PD +Y +
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 366 QAHHCDHCEVSRALRLMSRMEKDNCFPDRH 395
+ + LM +MEKD P++
Sbjct: 425 YKAYTKADMKEQVQILMKKMEKDGIVPNKR 454
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 117/294 (39%), Gaps = 11/294 (3%)
Query: 117 FHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGA---IRSF 173
+ L+ ++G Q + +EM+ S C ++ ++ + A+ A +R +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGC-RPDASVYNALITAHLHTRDKAKALEKVRGY 194
Query: 174 LRMDEF-GI---KPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHFLLTAKTYSILISG 228
L D+ GI +P + +++LL + V Q F D S T++ ++
Sbjct: 195 L--DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDA 252
Query: 229 WGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPD 288
+GK G + + M C D++ +N +D+ K ++ F ++ + +P
Sbjct: 253 YGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPT 312
Query: 289 AFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
T++ I Y A I A V KM N +P+ TY C+I V A E+ +
Sbjct: 313 LPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE 372
Query: 349 EMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
E+ + NA+ +C + A +L PD TY + K
Sbjct: 373 EVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI+ + + GD +AR +F+ M D+ D+++YN + L G EA N F DM+++
Sbjct: 296 LINMYSRCGDINEARRVFRVMRDK----DVISYNTMISGLAMHGASVEAINEFRDMVNRG 351
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC-NLLPNVFTYNCIIKRLCKNDKVEEA 343
P+ T ++ + V + M+R N+ P + Y CI+ L + ++EEA
Sbjct: 352 FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 411
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRM-EKDNCFPDRHTYNMVLK 402
Y ++ + ++PD + + H + ++ R+ E +N PD TY ++
Sbjct: 412 YRFIENI---PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN--PDSGTYVLLSN 466
Query: 403 LLIRIGRFDKATEVWEN 419
L G++ ++TE+ E+
Sbjct: 467 LYASSGKWKESTEIRES 483
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 10/221 (4%)
Query: 201 VKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNF 260
+K+A + F K + ++ +I G + + KA ELF+ M + +
Sbjct: 205 IKEALELFQDVK---IKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCV 261
Query: 261 LDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNL 320
L A G ++ + + ++R+E F + I+ Y DI+ A RV MR
Sbjct: 262 LSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD--- 318
Query: 321 LPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE-VSRAL 379
+V +YN +I L + EA +M+ RG +P+ + A+ + C H + L
Sbjct: 319 -KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVAL-LNACSHGGLLDIGL 376
Query: 380 RLMSRMEKD-NCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ + M++ N P Y ++ LL R+GR ++A EN
Sbjct: 377 EVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIEN 417
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 107/224 (47%), Gaps = 11/224 (4%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLD 247
++ L+ L +RK + +A + F++ +++ ++ +I G+ G+ K ELF M +
Sbjct: 344 WNSLITGLVQRKQISEAYELFEKMPGKDMVS---WTDMIKGFSGKGEISKCVELFGMMPE 400
Query: 248 QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHS 307
+ D + + + A G +EA FH ML K V P+++T+S + D+
Sbjct: 401 K----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIE 456
Query: 308 AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQA 367
++ ++ + N++ ++ N ++ CK +AY++ + +P+ SYN + +
Sbjct: 457 GLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCI----SEPNIVSYNTMIS 512
Query: 368 HHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
+ + +AL+L S +E P+ T+ +L + +G D
Sbjct: 513 GYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVD 556
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 126/312 (40%), Gaps = 5/312 (1%)
Query: 110 FQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF-IFKAYSRANLPDG 168
F+ ++ + V L + K+F + + L E ++ ++ + F I Y R + +
Sbjct: 67 FRKNIAVYERTVRRLAAAKKFEWVEEILEE--QNKYPNMSKEGFVARIINLYGRVGMFEN 124
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT--AKTYSILI 226
A + F M E K T F+ LL K + F + + +Y+ LI
Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLI 184
Query: 227 SGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE 286
G G +A L + ++G D + +N L G +E I+ M+ K V+
Sbjct: 185 KGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVK 244
Query: 287 PDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYEL 346
D +Y+ + N + DK++ L P+VFT+ +IK K++EA
Sbjct: 245 RDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITW 304
Query: 347 LDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIR 406
E+ G +P + +N++ C ++ A L + D V+ L++
Sbjct: 305 YKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVK 364
Query: 407 IGRFDKATEVWE 418
+ D+A E+ E
Sbjct: 365 GSKQDEAEEIVE 376
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 123/298 (41%), Gaps = 1/298 (0%)
Query: 122 EILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGI 181
E +G + L+ R S + + I+ + + +++ A+ M + GI
Sbjct: 220 EKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGI 279
Query: 182 KPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSI-LISGWGKIGDSGKARE 240
+ + ML+ + + V ++ F +A LL + ++ + + G+ E
Sbjct: 280 PESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLE 339
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
+ AM V ++ K EA ++ + + E TY+I I+ YC
Sbjct: 340 VVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYC 399
Query: 301 DANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTW 360
+ A + D+M + V Y+ I+ K ++ +A L+ +M RG KP+ W
Sbjct: 400 RLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIW 459
Query: 361 SYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
YN++ H ++ RA ++ M++ PD+ +Y ++ R ++ E+++
Sbjct: 460 IYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQ 517
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
TY+I I+ + ++ KA LF M+ +G ++AY+N +D K + +A + M
Sbjct: 390 TYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKM 449
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ +P+ + Y+ I + A D+ A ++ +M+R +LP+ +Y +I ++ ++
Sbjct: 450 KQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKEL 509
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
E EL E + K D + + +RL+ M+ + D Y+
Sbjct: 510 ERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSA 569
Query: 401 LKLLIRIG 408
L L G
Sbjct: 570 LNALRDAG 577
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 123/282 (43%), Gaps = 8/282 (2%)
Query: 135 DFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDM---- 190
+ L EM++ E +S+++ + +A++ A + I L E G K + D +M
Sbjct: 269 EVLEEMKDKGIPE-SSELYSMLIRAFAEAR--EVVITEKL-FKEAGGKKLLKDPEMCLKV 324
Query: 191 LLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGC 250
+L ++ + + K+ +T +++G+ K +A ++++ + + C
Sbjct: 325 VLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEEC 384
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
+ Y ++A C+ ++A +F +M+ K + YS + Y + A R
Sbjct: 385 EAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVR 444
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
++ KM++ PN++ YN +I + + A ++ EM V PD SY ++ + +
Sbjct: 445 LMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYN 504
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
E+ R + L + DR +++ + + R D+
Sbjct: 505 RSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDE 546
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP------ 287
D G ++++ M D+ +YN L C G VD A +I+ + +KR+E
Sbjct: 315 DLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKE--AKRMESSGLLKL 372
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
DAFTY I + DA A +V D M+ + PN T++ +I VE+A L
Sbjct: 373 DAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLF 432
Query: 348 DEMILRGVKPDTWSYNAIQAHHC-DHCEVSRALRL 381
+EM+ G +P++ +N I H C + C+ RA RL
Sbjct: 433 EEMLASGCEPNSQCFN-ILLHACVEACQYDRAFRL 466
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 112/285 (39%), Gaps = 23/285 (8%)
Query: 95 FSAHRFFLWAKSIPGFQHSV---ESFHILVEILGSCKQFAIL--WDFLTEMRESSCCEIN 149
F+ + + WA + SV + H ++ +C ++ + L E +S CE N
Sbjct: 384 FADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPN 443
Query: 150 SDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHV-------- 201
S F + A A D A R F + +++ D++ ++
Sbjct: 444 SQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGS 503
Query: 202 ---KQAQQFFDQAKSHFLL--TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLA 256
+ + + QA F T TY+IL+ G D + +EL M G + +
Sbjct: 504 LVNRNSNSPYIQASKRFCFKPTTATYNILLKACGT--DYYRGKELMDEMKSLGLSPNQIT 561
Query: 257 YNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR 316
++ +D G V+ A I M S PD Y+ I + + AF + ++MR
Sbjct: 562 WSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMR 621
Query: 317 RCNLLPNVFTYNCIIKRLCKNDKVEEAYELL---DEMILRGVKPD 358
R + PN TYN ++K K + E + L +M G KP+
Sbjct: 622 RYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPN 666
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
+I G GD K+R +++ +L + ++ N+ ++ + ++ +M
Sbjct: 273 MIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMNV--NSHDLGYTLKVYKNMQILD 330
Query: 285 VEPDAFTYSIFIHTYCDANDIHSA---FRVLDKMRRCNLLP-NVFTYNCIIKRLCKNDKV 340
V D +Y+I + T C A + A ++ +M LL + FTY IIK
Sbjct: 331 VTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMW 390
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
+ A ++ D+M GV P+T +++++ + + V +A L M C P+ +N++
Sbjct: 391 KWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNIL 450
Query: 401 LKLLIRIGRFDKATEVWEN 419
L + ++D+A ++++
Sbjct: 451 LHACVEACQYDRAFRLFQS 469
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 122/332 (36%), Gaps = 52/332 (15%)
Query: 116 SFHILVEILGSCKQFAILWDFLTE---MRESSCCEINSDIFWFIFKAYSRANLPDGAIRS 172
S++IL++ + + D E M S ++++ + I K ++ A + A++
Sbjct: 337 SYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKV 396
Query: 173 FLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGK 231
M G+ P H + L+ V+QA F++ S ++ ++IL+ +
Sbjct: 397 KDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVE 456
Query: 232 IGDSGKARELFQAMLDQGCPVDLLAYN----------NFLDALCKGGCVDEATNIFHDML 281
+A LFQ+ L A + N L G V+ +N +
Sbjct: 457 ACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQA 516
Query: 282 SKR-----------------------------------VEPDAFTYSIFIHTYCDANDIH 306
SKR + P+ T+S I + D+
Sbjct: 517 SKRFCFKPTTATYNILLKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVE 576
Query: 307 SAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI- 365
A R+L M P+V Y IK +N ++ A+ L +EM +KP+ +YN +
Sbjct: 577 GAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLL 636
Query: 366 --QAHHCDHCEVSRALRLMSRMEKDNCFPDRH 395
++ + EV + L + M P+ H
Sbjct: 637 KARSKYGSLLEVRQCLAIYQDMRNAGYKPNDH 668
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 116/248 (46%), Gaps = 19/248 (7%)
Query: 176 MDEFGIKPTIHDFDMLL--YFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIG 233
+++ G+ I+ + L+ Y C V+ A + F++ +++ ++ G K G
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER---DTVSWNSMLGGLVKAG 199
Query: 234 DSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYS 293
+ AR LF M + DL+++N LD + + +A +F M E + ++S
Sbjct: 200 ELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKM----PERNTVSWS 251
Query: 294 IFIHTYCDANDIHSAFRVLDKMRRCNLLP--NVFTYNCIIKRLCKNDKVEEAYELLDEMI 351
+ Y A D+ A + DKM LP NV T+ II + ++EA L+D+M+
Sbjct: 252 TMVMGYSKAGDMEMARVMFDKMP----LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
Query: 352 LRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFD 411
G+K D + +I A + +S +R+ S +++ N + + N +L + + G
Sbjct: 308 ASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLK 367
Query: 412 KATEVWEN 419
KA +V+ +
Sbjct: 368 KAFDVFND 375
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 221 TYSILISGWGKIGDSGKARELFQAMLDQGCPV-DLLAYNNFLDALCKGGCVDEATNIFHD 279
++S ++ G+ K GD AR +F M P +++ + + + G + EA +
Sbjct: 249 SWSTMVMGYSKAGDMEMARVMFDKM---PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQ 305
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
M++ ++ DA + ++ + R+ ++R NL N + N ++ K
Sbjct: 306 MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365
Query: 340 VEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNM 399
+++A+++ +++ K D S+N + H A+ L SRM ++ PD+ T+
Sbjct: 366 LKKAFDVFNDI----PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIA 421
Query: 400 VL 401
VL
Sbjct: 422 VL 423
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 2/259 (0%)
Query: 160 YSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTA 219
Y RAN+ D +I++F ++++ I T+ + LL+ K K+A + + + + +
Sbjct: 121 YGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEP 180
Query: 220 --KTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIF 277
+TY+ +I + G + + + M + ++ +D K DE +
Sbjct: 181 DLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVM 240
Query: 278 HDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKN 337
M V TY+I I C A ++D + C + PN TY+ +I C
Sbjct: 241 RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSE 300
Query: 338 DKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
+ ++EA L + M+ G KPD+ Y + C + AL L + N P
Sbjct: 301 ENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVM 360
Query: 398 NMVLKLLIRIGRFDKATEV 416
++ L + D+A E+
Sbjct: 361 KWLVNGLASRSKVDEAKEL 379
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 12/217 (5%)
Query: 158 KAYSRANLPDGAIRSFLRMDE-FGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL 216
K Y AN R +L M + +GI+P + ++ ++ LC+ + + + ++
Sbjct: 160 KDYKEAN------RVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWI 213
Query: 217 L-TAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
TA ++ ++I G+ K + R++ + M + G V + YN + LCK EA
Sbjct: 214 KPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKA 273
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
+ ++S R+ P++ TYS+ IH +C ++ A + + M P+ Y +I LC
Sbjct: 274 LIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLC 333
Query: 336 KNDKVEEAYELLDEMILRGVKPD----TWSYNAIQAH 368
K E A L E + + P W N + +
Sbjct: 334 KGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASR 370
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 109/275 (39%), Gaps = 44/275 (16%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
A+R +L + G + +E+++ ++ +L + + + EM E + + F +
Sbjct: 165 ANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEM-ERKWIKPTAASFGLM 223
Query: 157 FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKS-HF 215
+ + D + MDEFG+ + +++++ LCKRK +A+ D S
Sbjct: 224 IDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRM 283
Query: 216 LLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
+ TYS+LI G+ C +DEA N
Sbjct: 284 RPNSVTYSLLIHGF-----------------------------------CSEENLDEAMN 308
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
+F M+ +PD+ Y IH C D +A + + N +P+ ++ L
Sbjct: 309 LFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLA 368
Query: 336 KNDKVEEAYELL---DEMILRGVKPDTWSYNAIQA 367
KV+EA EL+ E R V D W N ++A
Sbjct: 369 SRSKVDEAKELIAVVKEKFTRNV--DLW--NEVEA 399
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 3/195 (1%)
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK- 283
+I +GK G + +A + F M GC + ++N L L + HD SK
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 284 RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
++ DA +++I I ++C+ + A+ + +M + L P+V TY +I L K+++
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
L + M+L+G KP+ ++N + A L+ M K PD TYNMV+K
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 404 LIRIGRF-DKATEVW 417
+ RF D A V+
Sbjct: 292 FF-LARFPDMAERVY 305
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 2/265 (0%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
I Y +A + A+ +F MD +G K ++ F+ L L + +F A S +
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 216 LLT--AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEA 273
+ A +++I I + ++G A + M G D++ Y + AL K
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 274 TNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKR 333
+++ M+ K +P+ T+++ I + A +L M + + P+ TYN +IK
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 334 LCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
+ A + M +G KP+ Y + + C A + + +P+
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 394 RHTYNMVLKLLIRIGRFDKATEVWE 418
T M+LK L++ G+ D+A + E
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIME 376
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 14/271 (5%)
Query: 136 FLTEMRESSCCEINSDIFWFIFKA-YSRANL-PDGAIRSFLRMDEFGIKPTIHDFDMLLY 193
F T++ S+ +N I F+ + S+A + D IR LRM+E I I +
Sbjct: 629 FKTDLGSSA---VNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYG---- 681
Query: 194 FLCKRKH-VKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPV 252
R+H +K+A++ + A +I + + G A LF ++GC
Sbjct: 682 ----RQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDP 737
Query: 253 DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVL 312
+ + ++AL G EA +I L K +E D Y+ I +A + A +
Sbjct: 738 GAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIY 797
Query: 313 DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
++M + ++ TYN +I + ++++A E+ G+ D Y + H+
Sbjct: 798 ERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKG 857
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
++S AL L S M+K P +YNM++K+
Sbjct: 858 GKMSEALSLFSEMQKKGIKPGTPSYNMMVKI 888
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 152/365 (41%), Gaps = 5/365 (1%)
Query: 55 RVVSDHRHPHHDLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHR-FFLWAKSIPGFQHS 113
R +S R D+ ++ F A++S + VLK + G+ R FF W K ++ S
Sbjct: 130 RGLSQRRQGSDDMRFVMSSFVAKLSFRDMCVVLKEQR--GWRQVRDFFSWMKLQLSYRPS 187
Query: 114 VESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSF 173
V + I++ + G + + + EM E C E ++ + Y+R + +
Sbjct: 188 VVVYTIVLRLYGQVGKIKMAEETFLEMLEVGC-EPDAVACGTMLCTYARWGRHSAMLTFY 246
Query: 174 LRMDEFGIKPTIHDFDMLLYFLCKRK-HVKQAQQFFDQAKSHFLLTAKTYSILISGWGKI 232
+ E I + ++ +L L K+ H K + + + TY++++S + K
Sbjct: 247 KAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQ 306
Query: 233 GDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY 292
G +A + F M G + + Y++ + K G ++A ++ DM S+ + P +T
Sbjct: 307 GFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTC 366
Query: 293 SIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMIL 352
+ + Y + A + M R + + II+ K +A + +E
Sbjct: 367 ATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETER 426
Query: 353 RGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDK 412
+ D +Y A+ H + V +AL ++ M+ + R Y ++L+ +I D
Sbjct: 427 LNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDC 486
Query: 413 ATEVW 417
A E +
Sbjct: 487 AEEAF 491
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 120/304 (39%), Gaps = 1/304 (0%)
Query: 116 SFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLR 175
SF + +L + + + DF + M+ + ++ + + Y + A +FL
Sbjct: 154 SFRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLE 213
Query: 176 MDEFGIKP-TIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGD 234
M E G +P + ML + +H + + LL+ Y+ ++S K
Sbjct: 214 MLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSF 273
Query: 235 SGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSI 294
GK +L+ M+++G P + Y + + K G +EA F +M S P+ TYS
Sbjct: 274 HGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSS 333
Query: 295 FIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG 354
I A D A + + MR ++P+ +T ++ K + +A L +M
Sbjct: 334 VISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNK 393
Query: 355 VKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKAT 414
+ D I + A + E+ N D TY + ++ + G KA
Sbjct: 394 IPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKAL 453
Query: 415 EVWE 418
+V E
Sbjct: 454 DVIE 457
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 108/264 (40%), Gaps = 3/264 (1%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSH 214
+ AY R + A F+ E G P +L+ L R ++A+ + +
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKN 769
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
L Y+ LI + G A E+++ M G P + YN + +G +D+A
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
IF + + D Y+ I Y + A + +M++ + P +YN ++K +
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-I 888
Query: 335 CKNDKV-EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPD 393
C ++ E ELL M G D +Y + + + + + A + ++ +++
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLS 948
Query: 394 RHTYNMVLKLLIRIGRFDKATEVW 417
++ +L L++ G ++A +
Sbjct: 949 HSHFSSLLSALVKAGMMEEAERTY 972
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
++ Y L + G + A F +ML EPDA + TY HSA
Sbjct: 188 VVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGR-HSAMLTFY 246
Query: 314 K-MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
K ++ +L + YN ++ L K + +L EM+ GV P+ ++Y + + +
Sbjct: 247 KAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQ 306
Query: 373 CEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
AL+ M+ P+ TY+ V+ L ++ G ++KA ++E+
Sbjct: 307 GFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYED 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 107/271 (39%), Gaps = 5/271 (1%)
Query: 144 SCCEINSDIFWFIFKAYSRANLPDGAIRS----FLRMDEFGIKPTIHDFDMLLYFLCKRK 199
+C E N ++ + +A L G ++ + RM G+ +I ++ ++ +
Sbjct: 764 TCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGL 823
Query: 200 HVKQAQQFFDQAK-SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYN 258
+ +A + F A+ S L K Y+ +I +GK G +A LF M +G +YN
Sbjct: 824 QLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYN 883
Query: 259 NFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC 318
+ E + M D TY I Y +++ A + + ++
Sbjct: 884 MMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEK 943
Query: 319 NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
+ + ++ ++ L K +EEA +M G+ PD+ I + + +
Sbjct: 944 GIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKG 1003
Query: 379 LRLMSRMEKDNCFPDRHTYNMVLKLLIRIGR 409
+ +M + + DR ++V L +G+
Sbjct: 1004 ILFYEKMIRSSVEDDRFVSSVVEDLYKAVGK 1034
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/223 (17%), Positives = 89/223 (39%), Gaps = 2/223 (0%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G S+++++ ++ + G Q + + R S ++ I+ + Y +
Sbjct: 804 GVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLY-LDEKIYTNMIMHYGKGGKMSE 862
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT-AKTYSILIS 227
A+ F M + GIKP ++M++ + + + + + T TY LI
Sbjct: 863 ALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQ 922
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+ + +A + + ++G P+ +++ L AL K G ++EA + M + P
Sbjct: 923 VYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISP 982
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
D+ + Y D +KM R ++ + F + +
Sbjct: 983 DSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVV 1025
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 145/366 (39%), Gaps = 53/366 (14%)
Query: 96 SAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWF 155
SA + F + ++ +++ L ++LG+CKQ L E+ S + D++
Sbjct: 126 SALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQ-PDQASLLFEVMLSEGLKPTIDVYTS 184
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFG-IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH 214
+ Y ++ L D A + M KP + F +L+ CK FD KS
Sbjct: 185 LISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGR-------FDLVKSI 237
Query: 215 FL--------LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPV-DLLAYNNFLDALC 265
L + TY+ +I G+GK G + + M++ G + D+ N+ + +
Sbjct: 238 VLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYG 297
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVF 325
G + + + + V+PD T++I I ++ A V+D M +
Sbjct: 298 NGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTV 357
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY----------------------- 362
TYN +I+ K ++E+ ++ +M +GVKP++ +Y
Sbjct: 358 TYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQI 417
Query: 363 ------------NAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRF 410
N I + +++ L +ME+ C PD+ T+ ++K G F
Sbjct: 418 VNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIF 477
Query: 411 DKATEV 416
D E+
Sbjct: 478 DAVQEL 483
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 11/268 (4%)
Query: 90 CKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESS----- 144
CK F + + S G S +++ +++ G F + L +M E
Sbjct: 226 CKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPD 285
Query: 145 CCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
C +NS I +Y + R G++P I F++L+ K K+
Sbjct: 286 VCTLNS-----IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKM 340
Query: 205 QQFFD-QAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA 263
D K F LT TY+I+I +GK G K ++F+ M QG + + Y + ++A
Sbjct: 341 CSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNA 400
Query: 264 LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPN 323
K G V + ++ +++ V D ++ I+ Y A D+ + + +M P+
Sbjct: 401 YSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPD 460
Query: 324 VFTYNCIIKRLCKNDKVEEAYELLDEMI 351
T+ +IK + + EL +MI
Sbjct: 461 KITFATMIKTYTAHGIFDAVQELEKQMI 488
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 2/201 (0%)
Query: 220 KTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
KTY+ L G +A LF+ ML +G + Y + + K +D+A +
Sbjct: 145 KTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEY 204
Query: 280 MLS-KRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
M S +PD FT+++ I C ++ +M + + TYN II K
Sbjct: 205 MKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAG 264
Query: 339 KVEEAYELLDEMILRGVK-PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
EE +L +MI G PD + N+I + + + + SR + PD T+
Sbjct: 265 MFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTF 324
Query: 398 NMVLKLLIRIGRFDKATEVWE 418
N+++ + G + K V +
Sbjct: 325 NILILSFGKAGMYKKMCSVMD 345
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 91/239 (38%), Gaps = 3/239 (1%)
Query: 182 KPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKTYSILISGWGKIGDSGKARE 240
+P + L L K QA F+ S L T Y+ LIS +GK KA
Sbjct: 141 EPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS 200
Query: 241 LFQAMLD-QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
+ M C D+ + + CK G D +I +M V TY+ I Y
Sbjct: 201 TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY 260
Query: 300 CDANDIHSAFRVL-DKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPD 358
A VL D + + LP+V T N II + + L GV+PD
Sbjct: 261 GKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPD 320
Query: 359 TWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
++N + + +M MEK TYN+V++ + GR +K +V+
Sbjct: 321 ITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVF 379
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 14/241 (5%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKAR 239
GI + LL K V++A+Q F+ + ++S L+ G+ + G+ KA
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK---NSVSWSALLGGYCQNGEHEKAI 351
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
E+F+ M ++ DL + L A V I + + + S I Y
Sbjct: 352 EIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLY 407
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
+ I SA RV KM + N+ T+N ++ L +N + EEA ++M+ +G+KPD
Sbjct: 408 GKSGCIDSASRVYSKMS----IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDY 463
Query: 360 WSYNAIQAHHCDHCE-VSRALRLMSRMEKD-NCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
S+ AI C H V M K P Y+ ++ LL R G F++A +
Sbjct: 464 ISFIAILT-ACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLL 522
Query: 418 E 418
E
Sbjct: 523 E 523
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 138/328 (42%), Gaps = 38/328 (11%)
Query: 86 VLKRCKN-----LGFSAHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEM 140
V+K C N +G S H L GF V V+ G CK EM
Sbjct: 116 VMKVCSNNGQVRVGSSVHGLVLRI----GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEM 171
Query: 141 RESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKH 200
E N+ + + AY ++ + A F M E + ++ L+ L K
Sbjct: 172 PER-----NAVSWTALVVAYVKSGELEEAKSMFDLMPE----RNLGSWNALVDGLVKSGD 222
Query: 201 VKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNF 260
+ A++ FD+ +++ Y+ +I G+ K GD AR+LF+ + VD+ A++
Sbjct: 223 LVNAKKLFDEMPKRDIIS---YTSMIDGYAKGGDMVSARDLFE----EARGVDVRAWSAL 275
Query: 261 LDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM----- 315
+ + G +EA +F +M +K V+PD F + + + C F + +K+
Sbjct: 276 ILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIM-VGLMSACSQ---MGCFELCEKVDSYLH 331
Query: 316 RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEV 375
+R N + + +I K ++ A +L +EM R D SY ++ H
Sbjct: 332 QRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCG 387
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKL 403
S A+RL +M + PD + ++LK+
Sbjct: 388 SEAIRLFEKMVDEGIVPDEVAFTVILKV 415
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 23/203 (11%)
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDML----------LYFLCKRKHVKQAQQFF 208
Y++ P+ A + F M +KP +F M+ + LC++ Q
Sbjct: 278 GYAQNGQPNEAFKVFSEMCAKNVKPD--EFIMVGLMSACSQMGCFELCEKVD-SYLHQRM 334
Query: 209 DQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGG 268
++ SH+++ A LI K G +A +LF+ M + DL++Y + ++ + G
Sbjct: 335 NKFSSHYVVPA-----LIDMNAKCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHG 385
Query: 269 CVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR-RCNLLPNVFTY 327
C EA +F M+ + + PD +++ + + + R + MR + ++L + Y
Sbjct: 386 CGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHY 445
Query: 328 NCIIKRLCKNDKVEEAYELLDEM 350
+CI+ L + K++EAYEL+ M
Sbjct: 446 SCIVNLLSRTGKLKEAYELIKSM 468
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
+ K G + +A ELF + D+ D++A+ ++A G E +F ML+
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 285 VEPDAFTYSIFIHTYCDANDIHS-AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEA 343
V P+A+TYS+ I H A + L +M + PN TY + + + K E A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 344 YELLDEMILRGVKPD 358
ELL EM +G PD
Sbjct: 323 RELLQEMKGKGFVPD 337
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Query: 239 RELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT 298
+E+F M +G + + DAL K G EA +F + K PD ++ +
Sbjct: 185 QEIFHKMRTEGFTNEAV---KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEA 241
Query: 299 YCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV-EEAYELLDEMILRGVKP 357
Y +A +V +M + PN +TY+ +IK L + K ++A + L EM+ G+ P
Sbjct: 242 YANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSP 301
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
+ +Y A+ + A L+ M+ PD L+
Sbjct: 302 NAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALE 346
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 120/266 (45%), Gaps = 48/266 (18%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLD 247
++ LL ++ V +A+ FD+ + ++++ +ISG+ G +A+E+F +M
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEER---NVESWNFMISGYAAAGLVKEAKEVFDSM-- 263
Query: 248 QGCPV-DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVE-PDAFTY------------- 292
PV D++++N + A GC +E +F+ ML E PD FT
Sbjct: 264 ---PVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSL 320
Query: 293 --SIFIHTYCDANDIHS----AFRVLDKMRRCNLLP------------NVFTYNCIIKRL 334
++H Y D + I A ++D +C + +V T+N II L
Sbjct: 321 SQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDL 380
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC----EVSRALRLMSRMEKDNC 390
+ ++A E+ EM+ G KP+ ++ + + C+H + + +MS + +
Sbjct: 381 SVHGLGKDALEIFSEMVYEGFKPNGITFIGVLS-ACNHVGMLDQARKLFEMMSSVYR--V 437
Query: 391 FPDRHTYNMVLKLLIRIGRFDKATEV 416
P Y ++ LL R+G+ ++A E+
Sbjct: 438 EPTIEHYGCMVDLLGRMGKIEEAEEL 463
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 120/270 (44%), Gaps = 26/270 (9%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLL---YFLCKRKHVKQAQQFFDQAK 212
+ +AY+ ++ P+ A+ F M + P + F +L C + +Q F K
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLF--IK 168
Query: 213 SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPV-DLLAYNNFLDALCKGGCVD 271
S + + L++ +G+ G AR++ M PV D +++N+ L A + G VD
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM-----PVRDAVSWNSLLSAYLEKGLVD 223
Query: 272 EATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCII 331
EA +F +M + VE +++ I Y A + A V D M + +V ++N ++
Sbjct: 224 EARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMP----VRDVVSWNAMV 275
Query: 332 KRL----CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEK 387
C N+ +E ++LD+ KPD ++ ++ + +S+ + ++K
Sbjct: 276 TAYAHVGCYNEVLEVFNKMLDDST---EKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 388 DNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ ++ + + G+ DKA EV+
Sbjct: 333 HGIEIEGFLATALVDMYSKCGKIDKALEVF 362
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
R L + M G D N + A K VDEA +F +M EP+A+TYS +
Sbjct: 207 VRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK 266
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKP 357
C+ + +M+ ++PN Y +I L +++EA E++ +M+ + P
Sbjct: 267 GVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSP 326
Query: 358 DTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
D +YN + C S AL ++ +K + Y ++
Sbjct: 327 DMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%)
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
++ M S V PD F ++ I Y ++ A RV +M PN +TY+ ++K +
Sbjct: 209 SLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGV 268
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
C+ +V + EM ++G+ P+ Y + + A+ ++ M ++ PD
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDM 328
Query: 395 HTYNMVLKLLIRIGRFDKATEVWE 418
TYN VL L R GR +A E+ E
Sbjct: 329 LTYNTVLTELCRGGRGSEALEMVE 352
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 118/265 (44%), Gaps = 20/265 (7%)
Query: 100 FFLWAKSIPGFQHSVESFHILVE--ILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIF 157
F W G++H+ E++H +++ I G F + L E + CE++ ++ I
Sbjct: 94 IFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFV---ETLIEEVIAGACEMSVPLYNCII 150
Query: 158 K-AYSRANLPDGAIRSF---LRMDEFGIKPTIHDFDMLLYFLCKR--------KHVKQAQ 205
+ R L + A + LR D+ KP + + +LL L KR ++ +
Sbjct: 151 RFCCGRKFLFNRAFDVYNKMLRSDDS--KPDLETYTLLLSSLLKRFNKLNVCYVYLHAVR 208
Query: 206 QFFDQAKSHFLLTAK-TYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDAL 264
Q KS+ ++ +++I + K + +A +F+ M G + Y+ + +
Sbjct: 209 SLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGV 268
Query: 265 CKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNV 324
C+ G V + + +M K + P+ Y + I + + A V+ M +L P++
Sbjct: 269 CEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDM 328
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDE 349
TYN ++ LC+ + EA E+++E
Sbjct: 329 LTYNTVLTELCRGGRGSEALEMVEE 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 10/186 (5%)
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALC-KGGCVDEATNIFHDML-SKRVEPDAFTYSIFIHT 298
L + ++ C + + YN + C + + A ++++ ML S +PD TY++ + +
Sbjct: 130 LIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSS 189
Query: 299 YCDAND--------IHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEM 350
+ +H+ + +M+ ++P+ F N IIK K +V+EA + EM
Sbjct: 190 LLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM 249
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRF 410
L G +P+ ++Y+ + C+ V + L M+ P+ Y +++ L R
Sbjct: 250 ALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRL 309
Query: 411 DKATEV 416
D+A EV
Sbjct: 310 DEAVEV 315
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 11/230 (4%)
Query: 191 LLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGC 250
LL K + ++ A++ F++ + L T++ +ISG+ +IGD AR+LF M +
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQRNLV--TWNAMISGYTRIGDMSSARQLFDTMPKR-- 360
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLS-KRVEPDAFTYSIFIHTYCDANDIHSAF 309
+++++N+ + G A F DM+ +PD T + D+
Sbjct: 361 --NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 310 RVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHH 369
++D +R+ + N Y +I + + EA + DEM R D SYN +
Sbjct: 419 CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAF 474
Query: 370 CDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ + L L+S+M+ + PDR TY VL R G + ++++
Sbjct: 475 AANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKS 524
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 187 DFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAML 246
D+++++ K + ++A + FD + +++ ++++I+G+ K+ D AR+ F M
Sbjct: 169 DWNVMISGYWKWGNKEEACKLFDMMPENDVVS---WTVMITGFAKVKDLENARKYFDRMP 225
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHT---YCDAN 303
++ ++++N L + G ++A +F+DML V P+ T+ I I D +
Sbjct: 226 EKS----VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPS 281
Query: 304 DIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYN 363
S +++D+ R + N F ++ K ++ A + +E+ G + + ++N
Sbjct: 282 LTRSLVKLIDEKR---VRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWN 335
Query: 364 AIQAHHCDHCEVSRALRLMSRMEKDNC 390
A+ + + ++S A +L M K N
Sbjct: 336 AMISGYTRIGDMSSARQLFDTMPKRNV 362
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 5/198 (2%)
Query: 222 YSILISGWGKIGDSGKARELFQAMLDQG-CPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
++ LI G+ +IG+S A L++ M G D Y + A+ V I +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ + + +H Y + D+ SA++V DKM +L+ +N +I +N K
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV----AWNSVINGFAENGKP 203
Query: 341 EEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMV 400
EEA L EM +G+KPD ++ ++ + ++ R+ M K + H+ N++
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 401 LKLLIRIGRFDKATEVWE 418
L L R GR ++A +++
Sbjct: 264 LDLYARCGRVEEAKTLFD 281
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 118/303 (38%), Gaps = 39/303 (12%)
Query: 148 INSDIFWFIFKAYSRANLPDGAIRSFLRMDEFG-IKPTIHDFDMLLYFLCKRKHVKQAQQ 206
IN I+ + + Y+ A + M G ++P H + L+ + V+ +
Sbjct: 83 INVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGET 142
Query: 207 FFDQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
+S F + L+ + GD A ++F M ++ DL+A+N+ ++
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVAWNSVINGFA 198
Query: 266 KGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVF 325
+ G +EA ++ +M SK ++PD FT + + RV M + L N+
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258
Query: 326 TYNCIIKRLCKNDKVEEAYELLDEMI----------LRGVKPDTWSYNAIQ--------- 366
+ N ++ + +VEEA L DEM+ + G+ + + AI+
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 367 ------------AHHCDHCE-VSRALRLMSRM-EKDNCFPDRHTYNMVLKLLIRIGRFDK 412
+ C HC V RM E+ P + ++ LL R G+ K
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 413 ATE 415
A E
Sbjct: 379 AYE 381
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 113/278 (40%), Gaps = 53/278 (19%)
Query: 179 FGIKPTIHDFDML--LYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSG 236
FG ++H L +YF C + A++ FD+ + ++ L++G+GK+G+
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCG--GLGDARKMFDEM---LVKDVNVWNALLAGYGKVGEMD 199
Query: 237 KARELFQAMLDQGCPV-DLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTY--- 292
+AR L + M C V + +++ + K G EA +F ML + VEPD T
Sbjct: 200 EARSLLEMM---PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAV 256
Query: 293 --------------------------------SIFIHTYCDANDIHSAFRVLDKMRRCNL 320
+ I Y + +I A V + C
Sbjct: 257 LSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE----CVN 312
Query: 321 LPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE-VSRAL 379
NV T+ II L + EA + + M+ GV+P+ ++ AI + C H V
Sbjct: 313 ERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILS-ACSHVGWVDLGK 371
Query: 380 RLMSRM-EKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
RL + M K P+ Y ++ LL R G+ +A EV
Sbjct: 372 RLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEV 409
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 114/271 (42%), Gaps = 11/271 (4%)
Query: 146 CEINSDIFWF-IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQA 204
C + +++ W + Y+++ AI F RM ++P +L ++
Sbjct: 210 CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELG 269
Query: 205 QQFFDQAKSHFLLTAKTYS-ILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDA 263
++ + A + + +I + K G+ KA ++F+ + ++ +++ + +
Sbjct: 270 ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER----NVVTWTTIIAG 325
Query: 264 LCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMR-RCNLLP 322
L G EA +F+ M+ V P+ T+ + + R+ + MR + + P
Sbjct: 326 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 385
Query: 323 NVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLM 382
N+ Y C+I L + K+ EA E++ M + S A H D RAL +
Sbjct: 386 NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSEL 445
Query: 383 SRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
++E +N Y ++ L +GR+D++
Sbjct: 446 IKLEPNNS----GNYMLLANLYSNLGRWDES 472
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 143/380 (37%), Gaps = 50/380 (13%)
Query: 79 SSDLVEQVLKRCKNLGF--SAHRF--FLWAKSIP-GFQHSVESFHI------------LV 121
+S+L EQ++ + +NLG S+H + F+ A + P G+++ + + L
Sbjct: 344 NSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLKVMQQQNLKPYDSTLA 403
Query: 122 EILGSCK---QFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE 178
+ C Q + L ++ E S S F + AY + P+ A+R RM E
Sbjct: 404 TVAAYCSKALQVDLAEHLLDQISECSY----SYPFNNLLAAYDSLDQPERAVRVLARMKE 459
Query: 179 FGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWG-------- 230
++P + +++L + Q + A ++ +G+
Sbjct: 460 LKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMMRNGFQHSPISRLN 519
Query: 231 ---KIGDSGKARELFQAM-----------LDQGCPVDLLAYNNFLDALCKGGCVDEATNI 276
+G G E+ + + + G P YN L +L + D NI
Sbjct: 520 VLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPT----YNIVLHSLLEANETDMVINI 575
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
F M S D TY+I I + SA ++ M R P T+ ++K L
Sbjct: 576 FKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTALMKILLN 635
Query: 337 NDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHT 396
+ EEA LLD+ L + D SYN I + + ++ +M ++ PD T
Sbjct: 636 DANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQMHREKVNPDPTT 695
Query: 397 YNMVLKLLIRIGRFDKATEV 416
+ V + G A E
Sbjct: 696 CHYVFSCYVEKGYHATAIEA 715
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 125/282 (44%), Gaps = 44/282 (15%)
Query: 154 WFI--FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA 211
W+I ++ R+NL A+ +++ M GIKP + F LL + + ++ +Q
Sbjct: 64 WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 212 K--SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGC 269
+ + + + L++ + K GD G ++F + ++ + +++N+ + +LC
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER----NQVSWNSLISSLCSFEK 179
Query: 270 VDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD---------------------------- 301
+ A F ML + VEP +FT + + T C
Sbjct: 180 WEMALEAFRCMLDENVEPSSFTL-VSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFI 238
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVF------TYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
N + + + L K+ +L F T+N ++ LC+N+++ EA E L EM+L GV
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 356 KPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTY 397
+PD ++ +++ C H E+ R + + N D +++
Sbjct: 299 EPDEFTISSVLP-ACSHLEMLRTGKELHAYALKNGSLDENSF 339
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
E+F+ M + G + +A LD LCK G V EA +F M K P+ Y+ + +
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
C A+ I A R+ KM+ + PN F+Y +++ L + +++A EM+ G P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 360 WSY 362
++
Sbjct: 237 PTF 239
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%)
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
++ G K G +A +LF M D+G +++ Y ++A CK +++A IF M +
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+ P+AF+Y + + + N + A +M PNV T+ ++ LC+ VE+A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 345 ELLDEMILRG 354
+D + +G
Sbjct: 257 SAIDTLNQKG 266
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
E+F+ M + G + +A LD LCK G V EA +F M K P+ Y+ + +
Sbjct: 120 EIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
C A+ I A R+ KM+ + PN F+Y +++ L + +++A EM+ G P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 360 WSY 362
++
Sbjct: 237 PTF 239
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%)
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
++ G K G +A +LF M D+G +++ Y ++A CK +++A IF M +
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAY 344
+ P+AF+Y + + + N + A +M PNV T+ ++ LC+ VE+A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 345 ELLDEMILRG 354
+D + +G
Sbjct: 257 SAIDTLNQKG 266
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 7/240 (2%)
Query: 123 ILGSCKQFAILWDFLTEMRESSCCEINSDIFWF--IFKAYSRANLPDGAIRSFLRMDEFG 180
IL S + + D + + E C + DI + + Y+ L AI RM G
Sbjct: 161 ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAG 220
Query: 181 IKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKAR 239
+KP+ LL + + H+K + ++ + LI + K G AR
Sbjct: 221 LKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYAR 280
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
+F M+D +++A+N+ + L + +A + M + ++PDA T++ Y
Sbjct: 281 MVFD-MMD---AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY 336
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
A V+ KM+ + PNV ++ I KN A ++ +M GV P+
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNA 396
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 120/287 (41%), Gaps = 17/287 (5%)
Query: 135 DFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYF 194
D + +M+E N + IF S+ A++ F++M E G+ P LL
Sbjct: 347 DVIGKMKEKGVAP-NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405
Query: 195 LCKRKHVKQAQQFFDQA-KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVD 253
L + ++ + + + A + L+ +GK GD A E+F + ++
Sbjct: 406 LGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK----S 461
Query: 254 LLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLD 313
L ++N L G +E F ML +EPDA T++ + ++ + ++ D
Sbjct: 462 LASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFD 521
Query: 314 KMR-RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
MR R ++P + +C++ L ++ ++EA++ + M L KPD I
Sbjct: 522 LMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSL---KPDA----TIWGAFLSS 574
Query: 373 CEVSRALRLMSRMEKDNCFPDRH---TYNMVLKLLIRIGRFDKATEV 416
C++ R L L K + H Y M++ L + R++ +
Sbjct: 575 CKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERI 621
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 35/210 (16%)
Query: 238 ARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIH 297
+R++F +M D+ +L ++N+ L + K G VD+A + +M ++PD T++ +
Sbjct: 143 SRKVFNSMKDR----NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLS 198
Query: 298 TYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC-----KNDKVEEAY-------- 344
Y A VL +M+ L P+ + + +++ + K K Y
Sbjct: 199 GYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWY 258
Query: 345 ------ELLDEMILRGVKP------------DTWSYNAIQAHHCDHCEVSRALRLMSRME 386
L+D I G P + ++N++ + C + A LM RME
Sbjct: 259 DVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRME 318
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
K+ PD T+N + +G+ +KA +V
Sbjct: 319 KEGIKPDAITWNSLASGYATLGKPEKALDV 348
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 115/301 (38%), Gaps = 17/301 (5%)
Query: 109 GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDG 168
G + V H L+ + C Q E+ E NS I YS A
Sbjct: 162 GLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI-----SGYSEAGYAKD 216
Query: 169 AIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFL-LTAKTYSILIS 227
A+ F +M+E G +P +L ++ + + A + + L+ S LIS
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 276
Query: 228 GWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEP 287
+GK GD AR +F M+ + D +A+ + + G EA +F +M V P
Sbjct: 277 MYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSP 332
Query: 288 DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELL 347
DA T S + + ++ +L N++ ++ K +VEEA +
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 392
Query: 348 DEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRI 407
+ M ++ TW NA+ + AL L RM + P T+ VL +
Sbjct: 393 EAMPVK--NEATW--NAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHA 445
Query: 408 G 408
G
Sbjct: 446 G 446
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 225 LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKR 284
LI + K G G AR+LF + ++ D +++N+ + + G +A ++F M +
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEG 228
Query: 285 VEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLP-NVFTYNCIIKRLCKNDKVEEA 343
EPD T + D+ + R+L++M + + F + +I K ++ A
Sbjct: 229 FEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSA 287
Query: 344 YELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKL 403
+ ++MI K D ++ A+ + + + S A +L MEK PD T + VL
Sbjct: 288 RRVFNQMI----KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSA 343
Query: 404 LIRIGRFDKATEV 416
+G + ++
Sbjct: 344 CGSVGALELGKQI 356
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%)
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
AY+ + LCK G +D+A + DM + R+ TY + + I A+RV++ M
Sbjct: 109 AYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESM 168
Query: 316 RRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEV 375
R ++ +V YN + C + ++E A E++ ++ G PD+ SY+A+ C +V
Sbjct: 169 RSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKV 228
Query: 376 SRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRF 410
A+ ++ RME+D T+ V+ L+ G +
Sbjct: 229 EAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYY 263
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 291 TYSIFIHTYCDANDIHSAFRVLDKMR--RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLD 348
Y I I C I A V+ M R L P+ TY+ I+ L + K+EEA+ +++
Sbjct: 109 AYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPS--TYHPILCSLTRKYKIEEAWRVVE 166
Query: 349 EMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
M + V D +YN HC E+ A +M ++E+D PD +Y+ ++ R G
Sbjct: 167 SMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAG 226
Query: 409 RFDKATEV 416
+ + A +
Sbjct: 227 KVEAAMAI 234
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 114/296 (38%), Gaps = 40/296 (13%)
Query: 97 AHRFFLWAKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFI 156
A R F K PG + + E F L+ GS F + L R SD F F+
Sbjct: 23 AERSFSTVKIPPGRRKTTE-FDKLINEAGSSGDFETVRRLLNN-RIVLGSFNTSDTFKFL 80
Query: 157 FKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFF-DQAKSHF 215
S ++ + R ++D G + +D+L+ LCK + A D +
Sbjct: 81 TNTASYSSYLEDLRRVLPQID--GGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRL 138
Query: 216 LLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
LT TY ++ + +A + ++M + +D+ AYN FL + C G ++ A+
Sbjct: 139 GLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASE 198
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR--------------CNLL 321
+ + PD+ +Y + C A + +A +L +M L+
Sbjct: 199 VMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTHAHVITGLV 258
Query: 322 PNVF---------------------TYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
+ ++ + +L K + EEA ++ EM++RG++
Sbjct: 259 EGGYYALGLEFVMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGLR 314
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
+ L ++IL+S K G L M D+G +N L A K A
Sbjct: 419 YELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAI 478
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRL 334
IF M+ +P +Y + AFRV + M + + PN++ Y + L
Sbjct: 479 QIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVL 538
Query: 335 CKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDR 394
K LL EM +G++P ++NA+ + + A RM+ +N P+
Sbjct: 539 TGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNE 598
Query: 395 HTYNMVLKLL 404
TY M+++ L
Sbjct: 599 ITYEMLIEAL 608
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 95/220 (43%), Gaps = 1/220 (0%)
Query: 184 TIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKT-YSILISGWGKIGDSGKARELF 242
+ F++LL KR + + ++ + L + ++ ++ K ++ A ++F
Sbjct: 422 VVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIF 481
Query: 243 QAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDA 302
+AM+D G +++Y L AL KG DEA +++ M+ +EP+ + Y+
Sbjct: 482 KAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQ 541
Query: 303 NDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSY 362
+ +L +M + P+V T+N +I +N AYE M V+P+ +Y
Sbjct: 542 QKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITY 601
Query: 363 NAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLK 402
+ + + A L + + + Y+ V+K
Sbjct: 602 EMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVK 641
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 151/391 (38%), Gaps = 28/391 (7%)
Query: 33 FHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSD--LVEQVLKRC 90
F LP PQ+F P + I R S + H L + N A++S D +LK C
Sbjct: 76 FDDLPRPQIF-PW-----NAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 91 KNLGFSAHRFFLWAKSIP-GFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEIN 149
L F+ A+ GF V + L+ + C++ E
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF----EGLPLPER 185
Query: 150 SDIFWF-IFKAYSRANLPDGAIRSFLRMDEFGIKPT-IHDFDMLLYFLCKRKHVKQAQQF 207
+ + W I AY++ P A+ F +M + +KP + +L F C + +KQ +
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC-LQDLKQGRSI 244
Query: 208 FDQAKSHFLLTAKTYSI-LISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
L I L + + K G A+ LF M +L+ +N + K
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP----NLILWNAMISGYAK 300
Query: 267 GGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFT 326
G EA ++FH+M++K V PD + + I + A + + + R + +VF
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 327 YNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRME 386
+ +I K VE A + D + R D ++A+ + H A+ L ME
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDR----DVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 387 KDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ P+ T+ L LL+ E W
Sbjct: 417 RGGVHPNDVTF---LGLLMACNHSGMVREGW 444
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 12/227 (5%)
Query: 192 LYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCP 251
LYF C ++ A+ F + + A++++++IS + +G+ KA E++ M+ G
Sbjct: 353 LYFKCGEANL--AETVFSKTQKD---VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVK 407
Query: 252 VDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRV 311
D++ + + L A + +++ I + R+E D S + Y + AFR+
Sbjct: 408 PDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRI 467
Query: 312 LDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCD 371
+ + + +V ++ +I + + EA DEM G+KPD + A+ + C
Sbjct: 468 FNSIPK----KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS-ACG 522
Query: 372 HCE-VSRALRLMSRM-EKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
H + L+ S+M K P Y+ ++ +L R GR +A E+
Sbjct: 523 HAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEI 569
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKM 315
Y L L K G + A +F +ML + +EP Y+ + Y +N I AF +LDKM
Sbjct: 126 TYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKM 185
Query: 316 R---RCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDH 372
+ +C P+VFTY+ ++K + + L EM R + P+T + N + + +
Sbjct: 186 KSFPQCQ--PDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRV 243
Query: 373 CEVSRALRLMSRM-EKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+ +++S M C PD T N++L + +G+ D E W
Sbjct: 244 GRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID-MMESW 288
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 123/322 (38%), Gaps = 19/322 (5%)
Query: 53 ISRVVSDHRHPHHDLELSLNQFS---------AQISSDLVEQVLKRCKNLGFSAHRFFLW 103
I+ V+ R P +++ L++ S + SDL+ K A F
Sbjct: 60 ITEPVNQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLI------AKKQWLQALEVFDM 113
Query: 104 AKSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRA 163
+ +Q ++ L+ +LG Q EM E E +++ + AY+R+
Sbjct: 114 LREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGL-EPTVELYTALLAAYTRS 172
Query: 164 NLPDGAIRSFLRMDEF-GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLL-TAKT 221
NL D A +M F +P + + LL + + + T
Sbjct: 173 NLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVT 232
Query: 222 YSILISGWGKIGDSGKARELFQAML-DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDM 280
+I++SG+G++G + ++ ML C D+ N L G +D + +
Sbjct: 233 QNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKF 292
Query: 281 LSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKV 340
+ +EP+ T++I I +Y V++ MR+ TYN II+
Sbjct: 293 RNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDA 352
Query: 341 EEAYELLDEMILRGVKPDTWSY 362
+ D+M G+K DT ++
Sbjct: 353 KNMELTFDQMRSEGMKADTKTF 374
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 154/398 (38%), Gaps = 51/398 (12%)
Query: 66 DLELSLNQFSAQISSDLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVESFHILVEILG 125
D+E + + + SDLV+ +++R A FF W F+H ++++ + +LG
Sbjct: 239 DVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLG 298
Query: 126 SCKQFAILWDFLTEMRESSC-CEINS------------------DIFWFIFKAYSRANLP 166
K + + EMR + EI + D+F S +N P
Sbjct: 299 KEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNP 358
Query: 167 DG----------AIRSFLRMDEFGIKPTIHD------FDMLLYFLCKR----KHVKQAQQ 206
L MD F ++ D LL + K V+Q+ +
Sbjct: 359 TPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNE 418
Query: 207 FFDQAK-SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALC 265
+ K ++ + S++ S + G +A E M G +D A + ++ C
Sbjct: 419 LLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYC 478
Query: 266 KGGCVDEATNIFHDMLSKR-VEPDAFTYSIFIHTYCDANDIHSAFRVLD-KMRRCNLLPN 323
G +DEA F M+ V +++ + YC+ N + A+++L ++ + L P
Sbjct: 479 DSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPR 538
Query: 324 VFTY-----NCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRA 378
TY N + K++ ++ EEA LL M G P + ++ + + A
Sbjct: 539 HSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPP---FIDPFMSYFSSTGKSTEA 595
Query: 379 LRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
L + M +N FP V + +++ R +A ++
Sbjct: 596 LGFLKAMTSNN-FPYISVVLRVFETMMKSARHSEAQDL 632
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 101/235 (42%), Gaps = 9/235 (3%)
Query: 180 GIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKAR 239
G +H LL + + AQ FD +S +++ LI+G + + KA
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR---NDVSWNALIAGHARRSGTEKAL 247
Query: 240 ELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTY 299
ELFQ ML G +Y + A G +++ + M+ + AF + + Y
Sbjct: 248 ELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMY 307
Query: 300 CDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
+ IH A ++ D++ + +V ++N ++ ++ +EA +EM G++P+
Sbjct: 308 AKSGSIHDARKIFDRLAK----RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Query: 360 WSYNAIQAHHCDHCE-VSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKA 413
S+ ++ C H + M+KD P+ Y V+ LL R G ++A
Sbjct: 364 ISFLSVLT-ACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 114/239 (47%), Gaps = 26/239 (10%)
Query: 182 KPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKAREL 241
+P + + L+ LCK + +A++ FD ++T ++ +I+G+ K+GD +AREL
Sbjct: 43 RPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVT---WTHVITGYIKLGDMREAREL 99
Query: 242 FQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCD 301
F + + +++ + + + + A +F +M + V +++ I Y
Sbjct: 100 FDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQ 152
Query: 302 ANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWS 361
+ I A + D+M N+ ++N ++K L + +++EA L + M R D S
Sbjct: 153 SGRIDKALELFDEMPE----RNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVS 204
Query: 362 YNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRH--TYNMVLKLLIRIGRFDKATEVWE 418
+ A+ + +V A RL +C P+R+ ++N ++ + R D+A ++++
Sbjct: 205 WTAMVDGLAKNGKVDEARRLF------DCMPERNIISWNAMITGYAQNNRIDEADQLFQ 257
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 177 DEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSG 236
D + + + ++ + K + A+ F + +++ ++ +I G+ + G
Sbjct: 101 DRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS---WNTMIDGYAQSGRID 157
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFI 296
KA ELF M ++ +++++N+ + AL + G +DEA N+F M + D +++ +
Sbjct: 158 KALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMV 209
Query: 297 HTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVK 356
+ A R+ D C N+ ++N +I +N++++EA +L M R
Sbjct: 210 DGLAKNGKVDEARRLFD----CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER--- 262
Query: 357 PDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF 391
D S+N + + E+++A L RM + N
Sbjct: 263 -DFASWNTMITGFIRNREMNKACGLFDRMPEKNVI 296
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 104/223 (46%), Gaps = 23/223 (10%)
Query: 159 AYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLT 218
+Y R + A+R F RM + + ++ ++ + + A++ FD+ L++
Sbjct: 73 SYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLFDEMPERDLVS 128
Query: 219 AKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFH 278
++++I G+ + + GKARELF+ M ++ D+ ++N L + GCVD+A ++F
Sbjct: 129 ---WNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 279 DMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKND 338
M E + +++ + Y + + A + L+ ++NC++ K
Sbjct: 182 RM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFVKKK 233
Query: 339 KVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRL 381
K+ EA + D M +R D S+N I + ++ A +L
Sbjct: 234 KIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQL 272
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 121/291 (41%), Gaps = 55/291 (18%)
Query: 140 MRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHD--FDMLLYFLCK 197
M E C N+ + Y++ D A F RM P +D ++ LL +
Sbjct: 152 MPERDVCSWNT-----MLSGYAQNGCVDDARSVFDRM------PEKNDVSWNALLSAYVQ 200
Query: 198 RKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
+++A F ++ L++ ++ L+ G+ K +AR+ F +M + D++++
Sbjct: 201 NSKMEEACMLFKSRENWALVS---WNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSW 253
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRR 317
N + + G +DEA +F + + D FT++ + Y + A + DKM
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Query: 318 CN-------------------------LLP--NVFTYNCIIKRLCKNDKVEEAYELLDEM 350
N ++P NV T+N +I + K+ EA L D+M
Sbjct: 310 RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKM 369
Query: 351 ILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVL 401
R P +W+ A+ A + ALRL +ME++ +R +++ L
Sbjct: 370 PKR--DPVSWA--AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 11/228 (4%)
Query: 188 FDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLD 247
++ +L + + ++ A++ FD T++ +I+G+ + G +A+ LF M
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVMPCR---NVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 248 QGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHS 307
+ D +++ + + G EA +F M + + ++S + T D +
Sbjct: 372 R----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Query: 308 AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQA 367
++ ++ + F N ++ CK +EEA +L EM D S+N + A
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM----AGKDIVSWNTMIA 483
Query: 368 HHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATE 415
+ H ALR M+++ PD T VL G DK +
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 134/340 (39%), Gaps = 40/340 (11%)
Query: 89 RCKNL--GFSAHRFFLWAKSIPGFQHSVESFHI-----LVEILGSCKQFAILWDFLTEMR 141
RCK++ G H F P FQ V F++ L+++ C M
Sbjct: 220 RCKDIVTGKWFHGFLQGLGFDPYFQSKV-GFNVILATSLIDMYAKCGDLRTARYLFDGMP 278
Query: 142 ESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHV 201
E + NS I YS+ + A+ FL M + GI P D + + R +
Sbjct: 279 ERTLVSWNS-----IITGYSQNGDAEEALCMFLDMLDLGIAP-----DKVTFLSVIRASM 328
Query: 202 KQAQQFFDQA------KSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLL 255
Q Q+ K+ F+ A L++ + K GD+ A++ F+ + + D +
Sbjct: 329 IQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK----DTI 384
Query: 256 AYNNFLDALCKGGCVDEATNIFHDMLSK-RVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
A+ + L G +EA +IF M K PD TY ++ + R +
Sbjct: 385 AWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAE 444
Query: 315 MRRC-NLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHC 373
MR L P V Y C++ L + + EEA L+ M VKP+ + A+ + C
Sbjct: 445 MRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTM---PVKPNVNIWGAL----LNGC 497
Query: 374 EVSRALRLMSRMEKDNCFPDR---HTYNMVLKLLIRIGRF 410
++ L L R+ P+ Y ++ + + GR+
Sbjct: 498 DIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRW 537
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 13/259 (5%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHF 215
I AY++ + A R F DE +K IH + L+ K ++ A++ F +
Sbjct: 220 IIDAYAKCGQMESAKRCF---DEMTVK-DIHIWTTLISGYAKLGDMEAAEKLFCEMPEK- 274
Query: 216 LLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATN 275
+++ LI+G+ + G +A +LF+ M+ G + +++ L A +
Sbjct: 275 --NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKE 332
Query: 276 IFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLC 335
I M+ V P+A S I Y + + ++ RV R C+ + +N +I L
Sbjct: 333 IHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF---RICDDKHDCVFWNTMISALA 389
Query: 336 KNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCE-VSRALRLMSRME-KDNCFPD 393
++ +A +LD+MI V+P+ + I + C H V LR M + PD
Sbjct: 390 QHGLGHKALRMLDDMIKFRVQPNRTTLVVI-LNACSHSGLVEEGLRWFESMTVQHGIVPD 448
Query: 394 RHTYNMVLKLLIRIGRFDK 412
+ Y ++ LL R G F +
Sbjct: 449 QEHYACLIDLLGRAGCFKE 467
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
Query: 241 LFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYC 300
L + + + P L+ N + A + +D+ I +M +PD TY+ +
Sbjct: 164 LLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILG 223
Query: 301 DANDIHSAFRVLDKMRR-CNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDT 359
A ++ VL M+ C++ N+ TYN ++ + K + + + +EM+ G++PD
Sbjct: 224 RAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDL 283
Query: 360 WSYNAIQAHHCDHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
SY A+ V +LRL M++ P + Y ++ L + G F A ++
Sbjct: 284 LSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQL 340
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 237 KARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSK-RVEPDAFTYSIF 295
K + + M + C D++ YN+ LD L + G V+E + M V + TY+
Sbjct: 195 KVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTV 254
Query: 296 IHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGV 355
++ A + ++M +C + P++ +Y +I L ++ V+E+ L DEM R +
Sbjct: 255 LNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQI 314
Query: 356 KPDTWSYNAI 365
+P + Y A+
Sbjct: 315 RPSVYVYRAL 324
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 221 TYSILISGWGKIGDSGKARELFQAML-DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHD 279
TY+ ++ G+ G + + M D V+++ YN L+ + K D I+++
Sbjct: 214 TYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNE 273
Query: 280 MLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDK 339
M+ +EPD +Y+ I + + ++ + R+ D+M++ + P+V+ Y +I L K+
Sbjct: 274 MVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGD 333
Query: 340 VEEAYELLDEM 350
+ A +L DE+
Sbjct: 334 FQSALQLSDEL 344
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 11/195 (5%)
Query: 133 LWDFLTEMRESSC----CEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDF 188
L L E+ ESS +N IF A++ D + M E+ KP + +
Sbjct: 161 LTSLLKEISESSLPYRLIVMNRIIF-----AFAETRQIDKVLMILKEMKEWECKPDVITY 215
Query: 189 DMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAK--TYSILISGWGKIGDSGKARELFQAML 246
+ +L L + V + K ++ TY+ +++G K ++ M+
Sbjct: 216 NSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMV 275
Query: 247 DQGCPVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIH 306
G DLL+Y +D+L + G V E+ +F +M +++ P + Y I + D
Sbjct: 276 QCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQ 335
Query: 307 SAFRVLDKMRRCNLL 321
SA ++ D+++ + L
Sbjct: 336 SALQLSDELKNTSSL 350
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 151/396 (38%), Gaps = 34/396 (8%)
Query: 33 FHSLPTPQVFNPLLPDLVSEISRVVSDHRHPHHDLELSLNQFSAQISSD--LVEQVLKRC 90
F S+P P F L + + + S R P H + S+ +S V+K C
Sbjct: 64 FLSVPLPDDF------LFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 91 KNLGFSAHRFFLWA---KSIPGFQHSVESFHILVEILGSCKQFAILWDFLTEMRESSCCE 147
+L SA R + GF LV C M E S
Sbjct: 118 ADL--SALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVA 175
Query: 148 INSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQF 207
NS + + + L D AI+ F +M E G +P F LL + V
Sbjct: 176 WNS-----LVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWV 230
Query: 208 FDQAKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCK 266
S L L K + LI+ + + GD GKARE+F M + ++ A+ + A
Sbjct: 231 HQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKE----TNVAAWTAMISAYGT 286
Query: 267 GGCVDEATNIFHDMLSK-RVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRC-NLLPNV 324
G +A +F+ M P+ T+ + A + V +M + L+P V
Sbjct: 287 HGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGV 346
Query: 325 FTYNCIIKRLCKNDKVEEAYELLDEMILRG--VKPDTWS--YNAIQAHHCDHCEVSRALR 380
+ C++ L + ++EAY+ + ++ G P W+ A + H V A R
Sbjct: 347 EHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKR 406
Query: 381 LMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEV 416
L++ +E DN P H M+ + G+ D+ + +
Sbjct: 407 LIA-LEPDN--PGHHV--MLSNIYALSGKTDEVSHI 437
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 113/269 (42%), Gaps = 10/269 (3%)
Query: 152 IFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQA 211
+F + K+ S+ LP + + RM + P+ + F ++ ++ + A
Sbjct: 74 LFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHA 133
Query: 212 K-SHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCV 270
S F L + L++ + K GD AR++F M ++ ++A+N+ + + G
Sbjct: 134 VVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEK----SIVAWNSLVSGFEQNGLA 189
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
DEA +F+ M EPD+ T+ + + V + L NV +
Sbjct: 190 DEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTAL 249
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKD-N 389
I + V +A E+ D+M + + ++ A+ + + H +A+ L ++ME D
Sbjct: 250 INLYSRCGDVGKAREVFDKM----KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCG 305
Query: 390 CFPDRHTYNMVLKLLIRIGRFDKATEVWE 418
P+ T+ VL G ++ V++
Sbjct: 306 PIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 255 LAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDK 314
L Y + L+ CK ++A + + M + P + +Y+ + Y + ++ +
Sbjct: 124 LTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQE 183
Query: 315 MRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRG-VKPDTWSYNAIQAHHCDHC 373
++ N++P+ +TYN ++ L + + +++EM G V PD +Y+ + + + D
Sbjct: 184 LKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAG 243
Query: 374 EVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIGRFDKATEVW 417
+A + + +E N D Y ++ L R+G+ + +W
Sbjct: 244 LSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIW 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 3/154 (1%)
Query: 261 LDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNL 320
LD + K + N F D+ TY ++ YC A +L+KM+ N+
Sbjct: 97 LDLVAKAREITAGENYFVDL--PETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNI 154
Query: 321 LPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALR 380
P+ +YN ++ K + E+ ++ E+ V PD+++YN ++S R
Sbjct: 155 TPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVER 214
Query: 381 LMSRMEKDN-CFPDRHTYNMVLKLLIRIGRFDKA 413
++ M +D PD TY+ + + + G KA
Sbjct: 215 VIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKA 248
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 25/267 (9%)
Query: 155 FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSH 214
+ KA SR G ++ + + G+ + + L+ K + ++Q FD+
Sbjct: 126 LVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKR 185
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVD---LLAYNNFLDALCKGG-CV 270
+ +Y+ +I G+ K G ARELF M P++ L+++N+ + + V
Sbjct: 186 ---DSVSYNSMIDGYVKCGLIVSARELFDLM-----PMEMKNLISWNSMISGYAQTSDGV 237
Query: 271 DEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCI 330
D A+ +F DM E D +++ I Y I A + D M R +V T+ +
Sbjct: 238 DIASKLFADM----PEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPR----RDVVTWATM 289
Query: 331 IKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN- 389
I K V A L D+M R D +YN++ A + + AL + S MEK++
Sbjct: 290 IDGYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESH 345
Query: 390 CFPDRHTYNMVLKLLIRIGRFDKATEV 416
PD T +VL + ++GR KA ++
Sbjct: 346 LLPDDTTLVIVLPAIAQLGRLSKAIDM 372
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 16/278 (5%)
Query: 131 AILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDM 190
A+L L E E S C N+ + + K Y + + A F RM F +K + + +
Sbjct: 128 AVLASGLFE--EISVCR-NTVTWIEMIKGYGKRIEIEKARELFERMP-FELK-NVKAWSV 182
Query: 191 LLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGC 250
+L + ++ A++FF+ A +S+++SG+ +IGD +AR +F + +
Sbjct: 183 MLGVYVNNRKMEDARKFFEDIPEK---NAFVWSLMMSGYFRIGDVHEARAIFYRVFAR-- 237
Query: 251 PVDLLAYNNFLDALCKGGCVDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFR 310
DL+ +N + + G D+A + F +M + EPDA T S + + +
Sbjct: 238 --DLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 311 VLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHC 370
V + + N F N +I K +E A + + + +R V N++ +
Sbjct: 296 VHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA----CCNSMISCLA 351
Query: 371 DHCEVSRALRLMSRMEKDNCFPDRHTYNMVLKLLIRIG 408
H + AL + S ME + PD T+ VL + G
Sbjct: 352 IHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGG 389
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 108/270 (40%), Gaps = 13/270 (4%)
Query: 152 IFW-FIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ 210
+ W + Y++ D AI +F M G +P +L + + ++
Sbjct: 240 VIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL 299
Query: 211 AKSHFL-LTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGC 269
+ L + LI + K GD A +F+++ + + N+ + L G
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVR----SVACCNSMISCLAIHGK 355
Query: 270 VDEATNIFHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNC 329
EA +F M S ++PD T+ + + ++ +M+ ++ PNV + C
Sbjct: 356 GKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGC 415
Query: 330 IIKRLCKNDKVEEAYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDN 389
+I L ++ K++EAY L+ EM VKP+ A+ H + A ++M +E
Sbjct: 416 LIHLLGRSGKLKEAYRLVKEM---HVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAG 472
Query: 390 CFPDRHTYNMVLKLLIRIGRFDKATEVWEN 419
+ ++ N L I TE W+
Sbjct: 473 SITNSYSENH----LASISNLYAHTERWQT 498
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 156 IFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQ-AKSH 214
+ KAY R A+ F +M + G++P+ +L ++ +Q +
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 215 FLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAYNNFLDALCKGGCVDEAT 274
F S+L++ + K G+ KA+ +F D+ D++ +N+ + G +EA
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVF----DRFSSKDIIMWNSIISGYASHGLGEEAL 417
Query: 275 NIFHDMLSKRVEPDAFTYSIFIHTYCD-ANDIHSAFRVLDKMR-RCNLLPNVFTYNCIIK 332
IFH+M S P+ T I I T C A + + + M + + P V Y+C +
Sbjct: 418 KIFHEMPSSGTMPNKVTL-IAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVD 476
Query: 333 RLCKNDKVEEAYELLDEMILRGVKPDTWSYNAI 365
L + +V++A EL++ M +KPD + A+
Sbjct: 477 MLGRAGQVDKAMELIESMT---IKPDATVWGAL 506
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 121/318 (38%), Gaps = 58/318 (18%)
Query: 139 EMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDEFGIKPTIHDFDMLL-YFLCK 197
EMRE + + + Y + N D A + F M E K + MLL Y L
Sbjct: 197 EMRERNVVTWTT-----MITGYRQNNRVDVARKLFEVMPE---KTEVSWTSMLLGYTLSG 248
Query: 198 RKHVKQAQQFFDQAKSHFLLTAKTYSILISGWGKIGDSGKARELFQAMLDQGCPVDLLAY 257
R ++ A++FF+ ++ +I G+G++G+ KAR +F M D+ D +
Sbjct: 249 R--IEDAEEFFEVMPMKPVIACNA---MIVGFGEVGEISKARRVFDLMEDR----DNATW 299
Query: 258 NNFLDALCKGGCVDEATNIFHDMLSKRVEP------------------------------ 287
+ A + G EA ++F M + V P
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Query: 288 -----DAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNDKVEE 342
D + S+ + Y ++ A V D+ ++ +N II + EE
Sbjct: 360 CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS----KDIIMWNSIISGYASHGLGEE 415
Query: 343 AYELLDEMILRGVKPDTWSYNAIQAHHCDHCEVSRALRLMSRMEKDNCF-PDRHTYNMVL 401
A ++ EM G P+ + AI ++ L + ME C P Y+ +
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTV 475
Query: 402 KLLIRIGRFDKATEVWEN 419
+L R G+ DKA E+ E+
Sbjct: 476 DMLGRAGQVDKAMELIES 493
>AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28618365-28622581 REVERSE
LENGTH=693
Length = 693
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 126/329 (38%), Gaps = 50/329 (15%)
Query: 79 SSDLVEQVLKRCKNLGF--SAHRF--FLWAKSIP-GFQHSVESFHI------------LV 121
+S+L EQ++ + +NLG S+H + F+ A + P G+++ + + L
Sbjct: 348 NSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLKVMQQQNLKPYDSTLA 407
Query: 122 EILGSCK---QFAILWDFLTEMRESSCCEINSDIFWFIFKAYSRANLPDGAIRSFLRMDE 178
+ C Q + L ++ E S S F + AY + P+ A+R RM E
Sbjct: 408 TVAAYCSKALQVDLAEHLLDQISECSY----SYPFNNLLAAYDSLDQPERAVRVLARMKE 463
Query: 179 FGIKPTIHDFDMLLYFLCKRKHVKQAQQFFDQAKSHFLLTAKTYSILISGWG-------- 230
++P + +++L + Q + A ++ +G+
Sbjct: 464 LKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMMRNGFQHSPISRLN 523
Query: 231 ---KIGDSGKARELFQAM-----------LDQGCPVDLLAYNNFLDALCKGGCVDEATNI 276
+G G E+ + + + G P YN L +L + D NI
Sbjct: 524 VLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPT----YNIVLHSLLEANETDMVINI 579
Query: 277 FHDMLSKRVEPDAFTYSIFIHTYCDANDIHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCK 336
F M S D TY+I I + SA ++ M R P T+ ++K L
Sbjct: 580 FKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTALMKILLN 639
Query: 337 NDKVEEAYELLDEMILRGVKPDTWSYNAI 365
+ EEA LLD+ L + D SYN I
Sbjct: 640 DANFEEALNLLDQAALEEIHLDVLSYNTI 668