Miyakogusa Predicted Gene

Lj0g3v0321799.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0321799.2 CUFF.21951.2
         (1018 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G20970.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   289   9e-78
AT4G27500.1 | Symbols: PPI1 | proton pump interactor 1 | chr4:13...    92   2e-18
AT5G36690.1 | Symbols:  | AT5G36690 and AT5G36780 represent iden...    54   4e-07
AT5G36780.1 | Symbols:  | AT5G36780 and AT5G36690 represent iden...    54   4e-07

>AT1G20970.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
            INVOLVED IN: biological_process unknown; LOCATED IN:
            plasma membrane, vacuole; EXPRESSED IN: guard cell,
            cultured cell; BEST Arabidopsis thaliana protein match
            is: proton pump interactor 1 (TAIR:AT4G27500.1); Has
            30201 Blast hits to 17322 proteins in 780 species: Archae
            - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
            Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
            (source: NCBI BLink). | chr1:7314338-7319246 FORWARD
            LENGTH=1364
          Length = 1364

 Score =  289 bits (739), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 153/357 (42%), Positives = 225/357 (63%), Gaps = 10/357 (2%)

Query: 425  EGSNTDTLDGLNMGTEVVRKPFYYLIRLPRYDDDENIKEQIKNALDQVDEKTKIRDVVRA 484
            E S  D  +GL +  E+ ++PFY+L R+PRYDD E + EQ+K+A +QVD+KT+ RD +RA
Sbjct: 763  EVSVLDASEGLTVAAEIEKRPFYFLPRVPRYDD-EKLAEQLKHAEEQVDQKTQNRDALRA 821

Query: 485  ETQTKKAICKEYNQEVRDAISAERAARDLLKSKRQEMDSVQSIINRLNNAISVGDIDSKI 544
            + Q  +AICK+Y+   +  ++ ER+AR  + SKRQE++++QS+I+R+ +A SV DIDS++
Sbjct: 822  DIQKIRAICKDYDISYKAVMAEERSARKAMHSKRQEIEALQSMISRVKSAASVDDIDSRV 881

Query: 545  RNMEHMIQHETLPLKEEXXXXXXXXXXXXNREELSANLAKQDQSHQ-LDDKNSIEEHFKQ 603
            RNMEH +QH TL L EE             RE++S+++  +D+  Q LD+K   EE  K 
Sbjct: 882  RNMEHTMQHTTLSLNEEKGFMREIKQLKQLREQISSSMGTKDEVKQALDEKEKTEERLK- 940

Query: 604  SQLLKKEMELLRTNVLXXXXXXXXXXXXYDEESNKLSELLAQFKAADDVRQEAYTKLHAL 663
              +L+KE++ LR ++              D E    S+L  QF+AAD VRQEA+  L  L
Sbjct: 941  --VLRKELDALRNDLSKAEEITKAAKKKCDGEWEAQSKLQEQFRAADAVRQEAFVHLQDL 998

Query: 664  RKQLHGKSKYFWEYKDAVTKGHELAVEGKKEELQSFCIDQVERIMELWNKNDEFRRDYLR 723
            +KQ   K+KYF++Y+D      E+A++  +  LQS C DQVE  M +WN +DEFR+ Y++
Sbjct: 999  KKQQREKNKYFFKYRDNSRAASEMALKKDRAALQSLCSDQVENFMNMWNNDDEFRKYYVK 1058

Query: 724  CNTRSTLRRLQTPDGRSLGPDEVPHVIPSTFTERAIKSDSLVSQSTPQQEKKPTPAE 780
             NTRST RRL T DGRSLGPDE P  I  T+  R   +D L + S   ++ +  PA+
Sbjct: 1059 SNTRSTFRRLGTLDGRSLGPDEEPPRI--TYAPR---TDKLRTSSDRAEKHEAVPAQ 1110



 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 12/87 (13%)

Query: 930  PAPSSETLSRTSEECDQIEKPVEVT-------KRSLKPS-QFTKQTKVKPLPMAIRNRG- 980
            P P++ET+  T  E   IE P + T       K+S KPS QF KQ K K +P+ +RNRG 
Sbjct: 1271 PIPTAETVVETPRE---IETPKKQTVEESQQMKKSHKPSSQFLKQNKSKSVPLPLRNRGS 1327

Query: 981  KRRLQPWMWXXXXXXXXXXXXXXGNSN 1007
            KR+L+ WMW              GN+N
Sbjct: 1328 KRKLRQWMWIGLIVVIIIALFLLGNAN 1354


>AT4G27500.1 | Symbols: PPI1 | proton pump interactor 1 |
           chr4:13743614-13745900 FORWARD LENGTH=612
          Length = 612

 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 164/370 (44%), Gaps = 55/370 (14%)

Query: 447 YYLIRLPRYDDDENIKEQIKNALDQVDE--------KTKIRDVVRAETQTKKAICKEYNQ 498
           +YL++   Y D      +IK  LD  D+        +T + D +RA+   +  +      
Sbjct: 79  FYLVKYRSYAD-----PKIKAKLDLADKELEKLNKARTGVLDKLRAKRAERSELF----- 128

Query: 499 EVRDAISAERAARD-LLKSKRQEMDSVQSIINRLNN---------AISVGD--IDSKIRN 546
           ++ D + +ER   + +   KR+EM+ +Q  + +L +         AI   +  ++S I +
Sbjct: 129 DLLDPLKSERKGFNTMFDEKRKEMEPLQQALGKLRSNDGGSARGPAICSSEEELNSMIYS 188

Query: 547 MEHMIQHETLPLKEEXXXXXXXXXXXXNREELSANLAKQDQSHQLDDKNSIEEHFKQSQL 606
            ++ IQHE++PL EE             R+++ AN A + +         I+E   Q   
Sbjct: 189 YQYRIQHESIPLTEEKQILKEIRLLEGTRDKVIANAAMRAK---------IKESMGQKDD 239

Query: 607 LKKEMELLRTNVLXXXXXXXXXXXXYDEESNKL-------SELLAQFKAADDVRQEAYTK 659
           ++ +++L+   +              +E S KL       + L  + K   + R +AY+ 
Sbjct: 240 IQGQVKLMGAGLDGVKKERQAISARINELSEKLKATKDEITVLENELKTVSEKRDKAYSN 299

Query: 660 LHALRKQLHGKSKYFWEYKDAVTKGHELAVEGKKEELQSFCIDQVERIMELWNKNDEFRR 719
           +H LR+Q    +  +++ +  + K  +LA +    EL++    +VE+ + LW     FR 
Sbjct: 300 IHDLRRQRDETNSEYYQNRTVLNKARDLAAQKNISELEALANAEVEKFISLWCSKKNFRE 359

Query: 720 DYLRCNTRSTLRRLQTPDGRSLGPDEVPHVIPSTFTERAIKSDSLVSQSTPQQEKKPTPA 779
           DY +   +S   R  + DGR   PDE P + P     +A  S++ V    P+ + KP P 
Sbjct: 360 DYEKRILQSLDSRQLSRDGRMRNPDEKPLIAPEAAPSKATPSETEV---VPKAKAKPQP- 415

Query: 780 ESVKSKDEPV 789
                K+EPV
Sbjct: 416 -----KEEPV 420


>AT5G36690.1 | Symbols:  | AT5G36690 and AT5G36780 represent
           identical copies. The duplication within clone F27C7 is
           believed an artifact with only one true copy existing. |
           chr5:14415185-14417288 REVERSE LENGTH=576
          Length = 576

 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 42/87 (48%)

Query: 653 RQEAYTKLHALRKQLHGKSKYFWEYKDAVTKGHELAVEGKKEELQSFCIDQVERIMELWN 712
           R   Y ++  LR Q    +  F++    + K  ELA  G   EL+ F   +V+R M LWN
Sbjct: 262 RDRFYARIKMLRIQRDKGNAAFFQSLSVMCKAKELAASGNVRELEVFASSEVDRFMTLWN 321

Query: 713 KNDEFRRDYLRCNTRSTLRRLQTPDGR 739
            +  FR DY+R  + S   R    DGR
Sbjct: 322 DDKAFREDYVRRISHSLCERELNEDGR 348


>AT5G36780.1 | Symbols:  | AT5G36780 and AT5G36690 represent
           identical copies. The duplication within clone F27C7 is
           believed an artifact with only one true copy existing. |
           chr5:14474485-14476588 REVERSE LENGTH=576
          Length = 576

 Score = 54.3 bits (129), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 42/87 (48%)

Query: 653 RQEAYTKLHALRKQLHGKSKYFWEYKDAVTKGHELAVEGKKEELQSFCIDQVERIMELWN 712
           R   Y ++  LR Q    +  F++    + K  ELA  G   EL+ F   +V+R M LWN
Sbjct: 262 RDRFYARIKMLRIQRDKGNAAFFQSLSVMCKAKELAASGNVRELEVFASSEVDRFMTLWN 321

Query: 713 KNDEFRRDYLRCNTRSTLRRLQTPDGR 739
            +  FR DY+R  + S   R    DGR
Sbjct: 322 DDKAFREDYVRRISHSLCERELNEDGR 348