Miyakogusa Predicted Gene

Lj0g3v0320789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0320789.1 tr|G7L8P4|G7L8P4_MEDTR Exosome complex
exonuclease OS=Medicago truncatula GN=MTR_8g073170 PE=3
SV=1,91.26,0,RIBONUCLEASE_II,Ribonuclease II/R, conserved site;
MITOTIC CONTROL PROTEIN DIS3,NULL; RIBONUCLEASE,N,CUFF.21741.1
         (366 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17510.2 | Symbols: EMB2763 | ribonuclease II family protein ...   652   0.0  
AT2G17510.1 | Symbols: EMB2763 | ribonuclease II family protein ...   652   0.0  
AT1G77680.1 | Symbols:  | Ribonuclease II/R family protein | chr...   155   3e-38

>AT2G17510.2 | Symbols: EMB2763 | ribonuclease II family protein |
            chr2:7609395-7616242 REVERSE LENGTH=1012
          Length = 1012

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/366 (84%), Positives = 336/366 (91%)

Query: 1    MTPEADIISSRYTKSVIKSCAALSYVEAQARMDDSRLMDPVTTDLRNMNSLAKKMRLRRI 60
            M+P+A+IIS+R+TKS+IKS AALSY+EAQARMDDSRL D +TTDLRNMN+LAK MR RRI
Sbjct: 647  MSPDAEIISTRFTKSIIKSSAALSYIEAQARMDDSRLTDSLTTDLRNMNTLAKIMRQRRI 706

Query: 61   DNGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQILRSFPLC 120
            D GALTLASAEVKF ID E HDPL+IGMYQI EANQMVEEFMLAANVSVA QIL+ FP C
Sbjct: 707  DRGALTLASAEVKFDIDPENHDPLNIGMYQILEANQMVEEFMLAANVSVAGQILKLFPSC 766

Query: 121  SLLRRHPIPTREMLEPFLRIATAVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRIMATR 180
            SLLRRHP PTREMLEP LR A A+GL LDVSSSKALADSLD AVG+DPYFNKLIRI+ATR
Sbjct: 767  SLLRRHPTPTREMLEPLLRTAAAIGLTLDVSSSKALADSLDRAVGEDPYFNKLIRILATR 826

Query: 181  CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGISKLPSVF 240
            CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADV VHRLLAASLGI KLP+VF
Sbjct: 827  CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAASLGIYKLPTVF 886

Query: 241  QDRLQLTSIADNLNYRHRNAQMAGRASIELHTLIYFRKRPTDTEARIVKIRSNGFFVFVP 300
            QDR QLTS+ADNLNYRHRNAQMAGRAS+EL+ LIYFR RPTD EAR+VKIRSNGF VFVP
Sbjct: 887  QDRPQLTSVADNLNYRHRNAQMAGRASVELYVLIYFRTRPTDEEARVVKIRSNGFIVFVP 946

Query: 301  KYGIEGPVYLTTRAEKGNGDWYVDEQEQKIKKMDGSVSYSILQSVQIHMEVVEPQPNRPK 360
            KYGIEGPVYLT + EKG GDWYVDE++QKI KMDGS+SYS+LQ+V+IHMEVVEPQPNRPK
Sbjct: 947  KYGIEGPVYLTGKGEKGAGDWYVDEEKQKIVKMDGSLSYSVLQTVKIHMEVVEPQPNRPK 1006

Query: 361  LQLTLI 366
            LQLTL+
Sbjct: 1007 LQLTLL 1012


>AT2G17510.1 | Symbols: EMB2763 | ribonuclease II family protein |
           chr2:7609395-7615881 REVERSE LENGTH=933
          Length = 933

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/366 (84%), Positives = 336/366 (91%)

Query: 1   MTPEADIISSRYTKSVIKSCAALSYVEAQARMDDSRLMDPVTTDLRNMNSLAKKMRLRRI 60
           M+P+A+IIS+R+TKS+IKS AALSY+EAQARMDDSRL D +TTDLRNMN+LAK MR RRI
Sbjct: 568 MSPDAEIISTRFTKSIIKSSAALSYIEAQARMDDSRLTDSLTTDLRNMNTLAKIMRQRRI 627

Query: 61  DNGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAQQILRSFPLC 120
           D GALTLASAEVKF ID E HDPL+IGMYQI EANQMVEEFMLAANVSVA QIL+ FP C
Sbjct: 628 DRGALTLASAEVKFDIDPENHDPLNIGMYQILEANQMVEEFMLAANVSVAGQILKLFPSC 687

Query: 121 SLLRRHPIPTREMLEPFLRIATAVGLHLDVSSSKALADSLDHAVGDDPYFNKLIRIMATR 180
           SLLRRHP PTREMLEP LR A A+GL LDVSSSKALADSLD AVG+DPYFNKLIRI+ATR
Sbjct: 688 SLLRRHPTPTREMLEPLLRTAAAIGLTLDVSSSKALADSLDRAVGEDPYFNKLIRILATR 747

Query: 181 CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGISKLPSVF 240
           CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADV VHRLLAASLGI KLP+VF
Sbjct: 748 CMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAASLGIYKLPTVF 807

Query: 241 QDRLQLTSIADNLNYRHRNAQMAGRASIELHTLIYFRKRPTDTEARIVKIRSNGFFVFVP 300
           QDR QLTS+ADNLNYRHRNAQMAGRAS+EL+ LIYFR RPTD EAR+VKIRSNGF VFVP
Sbjct: 808 QDRPQLTSVADNLNYRHRNAQMAGRASVELYVLIYFRTRPTDEEARVVKIRSNGFIVFVP 867

Query: 301 KYGIEGPVYLTTRAEKGNGDWYVDEQEQKIKKMDGSVSYSILQSVQIHMEVVEPQPNRPK 360
           KYGIEGPVYLT + EKG GDWYVDE++QKI KMDGS+SYS+LQ+V+IHMEVVEPQPNRPK
Sbjct: 868 KYGIEGPVYLTGKGEKGAGDWYVDEEKQKIVKMDGSLSYSVLQTVKIHMEVVEPQPNRPK 927

Query: 361 LQLTLI 366
           LQLTL+
Sbjct: 928 LQLTLL 933


>AT1G77680.1 | Symbols:  | Ribonuclease II/R family protein |
           chr1:29192188-29195963 REVERSE LENGTH=1055
          Length = 1055

 Score =  155 bits (393), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 177/379 (46%), Gaps = 64/379 (16%)

Query: 4   EADIISSRYTKSVIKSCAALSYVEAQARMDDS---------------RLMDPVTTDLRNM 48
           E D+I     +++I+SC  LSY  AQ  +D                 +  D VT  ++ +
Sbjct: 578 EGDVIDRWIGRTIIRSCCKLSYDHAQDIIDGKSDVAENGWPALHGSFKWCD-VTRSVKQL 636

Query: 49  NSLAKKMRLRRIDNGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLAANVS 108
           + ++  +R +R  NGAL L +++  F  D E   P D      + +N +VEEFML AN++
Sbjct: 637 SEISTTLRQKRFRNGALQLENSKPVFLFD-EHGVPYDFVTCSRKGSNFLVEEFMLLANMT 695

Query: 109 VAQQILRSFPLCSLLRRHPIPTREMLEPFLRIATAVGLHLDVSSSKALADSLDHAVG--- 165
            A+ I +++   SLLRRHP P    L+ F    +  G+ LD+SSS  L DSL+   G   
Sbjct: 696 AAEVISQAYRASSLLRRHPEPNTRKLKEFEGFCSKHGMDLDISSSGQLQDSLEKITGNLK 755

Query: 166 DDPYFNKLIRIMATRCMTQAVYFCSGDL--SPPEYHHYGLAAPLYTHFTSPIRRYADVIV 223
           DD  F  ++   A + M  A YFC+G+L  S  E+ HY LA PLYTHFTSP+RRY D++V
Sbjct: 756 DDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYALAVPLYTHFTSPLRRYPDIVV 815

Query: 224 HRLLAA----------------------------------------SLGISKLPSVFQDR 243
           HR LAA                                        +L ++ L       
Sbjct: 816 HRALAAALEAEELYSKQKQTAIDEGRSCFTGIHFNKDAAESIEGKEALSVAALKHGVPST 875

Query: 244 LQLTSIADNLNYRHRNAQMAGRASIELHTLIYFRKRPT-DTEARIVKIRSNGFFVFVPKY 302
             L+ +A   N R   A+    A  +L+T    +++     EAR++ + S    V++ K 
Sbjct: 876 EILSDVAAYCNERKLAARKVRDACDKLYTWFVLKQKEIFPCEARVMNLGSRFMTVYISKL 935

Query: 303 GIEGPVYLTTRAEKGNGDW 321
           GIE  +Y   + E    DW
Sbjct: 936 GIERRIYY-DQIEGLCADW 953