Miyakogusa Predicted Gene

Lj0g3v0320689.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0320689.2 Non Chatacterized Hit- tr|I3SL63|I3SL63_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,84.38,0.0000004,
,CUFF.21787.2
         (78 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38120.1 | Symbols: AUX1, WAV5, PIR1, MAP1 | Transmembrane am...    51   1e-07
AT5G01240.1 | Symbols: LAX1 | like AUXIN RESISTANT 1 | chr5:9822...    47   4e-06
AT5G01240.2 | Symbols: LAX1 | like AUXIN RESISTANT 1 | chr5:9866...    46   4e-06

>AT2G38120.1 | Symbols: AUX1, WAV5, PIR1, MAP1 | Transmembrane amino
           acid transporter family protein | chr2:15973493-15976792
           FORWARD LENGTH=485
          Length = 485

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 28/32 (87%)

Query: 36  ENAAEKLLFFIPNWTLMYIVNAFVAIWVLVVG 67
           +NAAEK  FF+P+WT MY++NAFV +WVL+VG
Sbjct: 408 QNAAEKPPFFMPSWTAMYVLNAFVVVWVLIVG 439


>AT5G01240.1 | Symbols: LAX1 | like AUXIN RESISTANT 1 |
           chr5:98228-101493 FORWARD LENGTH=488
          Length = 488

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/32 (59%), Positives = 26/32 (81%)

Query: 36  ENAAEKLLFFIPNWTLMYIVNAFVAIWVLVVG 67
            NAAEK  FFIP+W  +Y++NAF+ +WVLV+G
Sbjct: 414 RNAAEKPPFFIPSWAGVYVINAFIVVWVLVLG 445


>AT5G01240.2 | Symbols: LAX1 | like AUXIN RESISTANT 1 |
           chr5:98663-101493 FORWARD LENGTH=408
          Length = 408

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/32 (59%), Positives = 26/32 (81%)

Query: 36  ENAAEKLLFFIPNWTLMYIVNAFVAIWVLVVG 67
            NAAEK  FFIP+W  +Y++NAF+ +WVLV+G
Sbjct: 334 RNAAEKPPFFIPSWAGVYVINAFIVVWVLVLG 365