Miyakogusa Predicted Gene

Lj0g3v0320209.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0320209.1 Non Chatacterized Hit- tr|I1LIT8|I1LIT8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42357
PE,86.05,0,Putative anticodon-binding domain of alanyl-tRNA synthetase
(AlaRS),Alanine-tRNA ligase, class IIc, ,CUFF.21709.1
         (173 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50200.2 | Symbols: ALATS | Alanyl-tRNA synthetase | chr1:185...   254   2e-68
AT1G50200.1 | Symbols: ALATS, ACD | Alanyl-tRNA synthetase | chr...   254   2e-68
AT5G22800.1 | Symbols: EMB86, EMB1030, EMB263 | Alanyl-tRNA synt...    69   2e-12

>AT1G50200.2 | Symbols: ALATS | Alanyl-tRNA synthetase |
           chr1:18591429-18598167 REVERSE LENGTH=963
          Length = 963

 Score =  254 bits (649), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/173 (70%), Positives = 144/173 (83%)

Query: 1   MGDVFTELKQQEAHIRDIIKEEEESFGRTLIKGIEKFESSVRHVQGKLLSGEEAFVLWDT 60
           MGDVFTELK+ E  I DIIKEEE SF +TL KGIEKF  + + VQG  LSG++AF+LWDT
Sbjct: 362 MGDVFTELKEHEKKITDIIKEEEASFCKTLAKGIEKFRKAGQAVQGNTLSGDDAFILWDT 421

Query: 61  FGFPLDLTQLMAEEKGLLVDVEGFNSAMEAARERSRNAQTKQAGGAIVMDADATSALHKK 120
           +GFPLDLTQLMAEE+GLLVDV+GFN AME ARERSR+AQ KQAGGAIVMDADATS LHK 
Sbjct: 422 YGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKA 481

Query: 121 GILPTDDSFKYVWFKDHQSVVKAIYTVSEFVDSVNTDGDIGVILESTSFYAEQ 173
           G+  TDDSFKY+WF+DH+S +KAIYT S F++S     ++G++L STSFYAEQ
Sbjct: 482 GVSATDDSFKYIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQ 534


>AT1G50200.1 | Symbols: ALATS, ACD | Alanyl-tRNA synthetase |
           chr1:18591429-18598311 REVERSE LENGTH=1003
          Length = 1003

 Score =  254 bits (649), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/173 (70%), Positives = 144/173 (83%)

Query: 1   MGDVFTELKQQEAHIRDIIKEEEESFGRTLIKGIEKFESSVRHVQGKLLSGEEAFVLWDT 60
           MGDVFTELK+ E  I DIIKEEE SF +TL KGIEKF  + + VQG  LSG++AF+LWDT
Sbjct: 410 MGDVFTELKEHEKKITDIIKEEEASFCKTLAKGIEKFRKAGQAVQGNTLSGDDAFILWDT 469

Query: 61  FGFPLDLTQLMAEEKGLLVDVEGFNSAMEAARERSRNAQTKQAGGAIVMDADATSALHKK 120
           +GFPLDLTQLMAEE+GLLVDV+GFN AME ARERSR+AQ KQAGGAIVMDADATS LHK 
Sbjct: 470 YGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKA 529

Query: 121 GILPTDDSFKYVWFKDHQSVVKAIYTVSEFVDSVNTDGDIGVILESTSFYAEQ 173
           G+  TDDSFKY+WF+DH+S +KAIYT S F++S     ++G++L STSFYAEQ
Sbjct: 530 GVSATDDSFKYIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQ 582


>AT5G22800.1 | Symbols: EMB86, EMB1030, EMB263 | Alanyl-tRNA
           synthetase, class IIc | chr5:7616221-7619961 REVERSE
           LENGTH=978
          Length = 978

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 16/175 (9%)

Query: 6   TELKQQEAHIRDIIKEEEESFGRTLIKGIEKFESSVRHVQG--------KLLSGEEAFVL 57
           +++K + + I + I++EE  F +TL +G +  +  +               L G++AF+L
Sbjct: 420 SDVKLKASRIIEEIRQEELHFKKTLERGEKLLDQKLNDALSIADKTKDTPYLDGKDAFLL 479

Query: 58  WDTFGFPLDLTQLMAEEKGLLVDVEGFNSAMEAARERSRNAQTKQAGGAIVMDADATSAL 117
           +DTFGFP+++T  +AEE+G+ +D+ GF   ME  R +S+ A        +  DAD T  +
Sbjct: 480 YDTFGFPVEITAEVAEERGVSIDMNGFEVEMENQRRQSQAAHN-VVKLTVEDDADMTKNI 538

Query: 118 HKKGILPTDDSFKYVWFKDHQSVVKAIYTVSEFVDSVNTDGDIGVILESTSFYAE 172
                L  D           ++VVK++    + V  V+   ++ V+L+ T FYAE
Sbjct: 539 ADTEFLGYDS-------LSARAVVKSLLVNGKPVIRVSEGSEVEVLLDRTPFYAE 586