Miyakogusa Predicted Gene

Lj0g3v0318879.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318879.1 Non Chatacterized Hit- tr|I1MAL3|I1MAL3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4406
PE=,94.68,7.00649e-44,no description,NULL; Ufm1,Ubiquitin-fold
modifier 1; Ubiquitin-like,NULL; SUBFAMILY NOT NAMED,NULL;
,CUFF.21616.1
         (94 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G77710.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Ubiquitin-...   172   6e-44

>AT1G77710.1 | Symbols:  | CONTAINS InterPro DOMAIN/s:
          Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 244
          Blast hits to 244 proteins in 106 species: Archae - 0;
          Bacteria - 0; Metazoa - 149; Fungi - 0; Plants - 47;
          Viruses - 0; Other Eukaryotes - 48 (source: NCBI
          BLink). | chr1:29206750-29207895 FORWARD LENGTH=93
          Length = 93

 Score =  172 bits (435), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 84/87 (96%), Positives = 86/87 (98%)

Query: 1  MASGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGI 60
          MA+GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GI
Sbjct: 1  MATGGKVSFKVTLTSDPKLPFKVFSVPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGI 60

Query: 61 NPQQSAGNVFLKHGSELRLIPRDRVGA 87
          NPQQSAGNVFLKHGSELRLIPRDRVGA
Sbjct: 61 NPQQSAGNVFLKHGSELRLIPRDRVGA 87