Miyakogusa Predicted Gene

Lj0g3v0318519.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318519.1 Non Chatacterized Hit- tr|I1M552|I1M552_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45627
PE,41.18,3e-18,seg,NULL,CUFF.21560.1
         (158 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G05950.1 | Symbols:  | unknown protein; Has 50 Blast hits to ...    59   2e-09

>AT1G05950.1 | Symbols:  | unknown protein; Has 50 Blast hits to 45
           proteins in 14 species: Archae - 5; Bacteria - 0;
           Metazoa - 4; Fungi - 0; Plants - 34; Viruses - 0; Other
           Eukaryotes - 7 (source: NCBI BLink). |
           chr1:1804573-1807471 REVERSE LENGTH=627
          Length = 627

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 22/141 (15%)

Query: 12  LTENEILNACNICVCLDASKIVPDIEGWTICKVVVLLIDNKDENFYLIFGSITQGVWSMV 71
           L E  I++AC++ + LDAS  +  +    I +V VLL+D++ ++ YL   SITQGVWS++
Sbjct: 109 LLEKVIVDACSLSMSLDASSDLFILNKCPIRRVAVLLVDSEKKSCYLQHSSITQGVWSLL 168

Query: 72  EKDVDTSTQSCEVTTGTIYTYTKRRSVQKTSKNEFNVGEDRFLQXXXXXXXXXXXXNKTD 131
           EK ++                 K ++ ++  K      E  F +            N  D
Sbjct: 169 EKPIE-----------------KEKAARENQKE-----EGVFQKVAFAVVKEATGVNHKD 206

Query: 132 VMLLESYTVYSQSKEKTVSRL 152
           +++LE + V S S+EKT  R 
Sbjct: 207 IVILERHLVCSLSEEKTAVRF 227