Miyakogusa Predicted Gene

Lj0g3v0318419.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318419.1 Non Chatacterized Hit- tr|I3SYT8|I3SYT8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.54,0,LigB,Extradiol ring-cleavage dioxygenase, class III
enzyme, subunit B; no description,Extradiol
ring,NODE_34778_length_1006_cov_48.422466.path2.1
         (236 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G15093.1 | Symbols:  | catalytic LigB subunit of aromatic rin...   291   2e-79

>AT4G15093.1 | Symbols:  | catalytic LigB subunit of aromatic
           ring-opening dioxygenase family | chr4:8618454-8619472
           FORWARD LENGTH=269
          Length = 269

 Score =  291 bits (745), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 141/208 (67%), Positives = 163/208 (78%), Gaps = 3/208 (1%)

Query: 19  WDTHVPTVNAVDRNDTIYDFYGFPKNMYKLKYPAPGAPHLAKRVKELLTASG-FSRVDED 77
           WDT  P+VN V RN+TI+DF GFP  MYKLKY APGA  L KRVKELL   G   RVDED
Sbjct: 51  WDTKFPSVNTVLRNNTIHDFSGFPDPMYKLKYEAPGAIELGKRVKELLMKEGGMKRVDED 110

Query: 78  RKRGLDHGAWVPLMLMYPDADIPVCQLSVSSSMGGTYHYEMGKALAPLKDEGVLIIGSGS 137
            KRGLDHGAWVPLMLMYP+ADIP+CQLSV S+  G+YHY MGKALA LKDEGVLIIGSGS
Sbjct: 111 TKRGLDHGAWVPLMLMYPEADIPICQLSVQSNQNGSYHYNMGKALASLKDEGVLIIGSGS 170

Query: 138 ATHNLRAI--GPRNSPPPPWAVDFMSWLKSSLLHGRYEEVNQYEEKAPYAKMAHPWPDHF 195
           ATHNLR +     +  P PWA++F  WL+ SLL GRY +VN++EEKAP AKMAHPWP+H 
Sbjct: 171 ATHNLRKLDFNITDGSPVPWALEFDHWLRDSLLQGRYGDVNEWEEKAPNAKMAHPWPEHL 230

Query: 196 FPLHVAMGAAGENAKAKVVHDSWDGGSI 223
           +PLHV MGAAG +AKA+ +H SW  G++
Sbjct: 231 YPLHVVMGAAGGDAKAEQIHTSWQLGTL 258