Miyakogusa Predicted Gene

Lj0g3v0318259.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0318259.1 Non Chatacterized Hit- tr|I1L9B4|I1L9B4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26619
PE,60.81,4e-18,UbiA,UbiA prenyltransferase family; BACTERIOCHLOROPHYLL
SYNTHASE,NULL; PRENYLTRANSFERASES,NULL,CUFF.21534.1
         (138 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | homogentisate p...   166   3e-42
AT3G11945.2 | Symbols: PDS2, ATHST, HST | homogentisate prenyltr...    64   4e-11
AT3G11945.1 | Symbols: PDS2, ATHST, HST | homogentisate prenyltr...    64   4e-11
AT3G51820.1 | Symbols: ATG4, G4, CHLG | UbiA prenyltransferase f...    50   7e-07

>AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | homogentisate
           phytyltransferase 1 | chr2:8207491-8210047 FORWARD
           LENGTH=393
          Length = 393

 Score =  166 bits (421), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 75/135 (55%), Positives = 102/135 (75%)

Query: 1   MQTFVFKRPTIFPRSLIFVTIFMSLYSMGIALLKDIPDVEGDKKFGIYSFPARFGKKRVF 60
           +QT VF RP +F R LIF T FMS +S+ IAL KDIPD+EGDK FGI SF    G+KRVF
Sbjct: 256 IQTHVFGRPILFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQKRVF 315

Query: 61  WVCVSLFELAFGIALMVGATSSYMWSKVAMILGNTVLASVVWYRAKSVNLGSKDSMASFY 120
           W CV+L ++A+ +A++VGATS ++WSKV  ++G+ +LA+ +W RAKSV+L SK  + S Y
Sbjct: 316 WTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEITSCY 375

Query: 121 MLIWKILFAAYMLMP 135
           M IWK+ +A Y+L+P
Sbjct: 376 MFIWKLFYAEYLLLP 390


>AT3G11945.2 | Symbols: PDS2, ATHST, HST | homogentisate
           prenyltransferase | chr3:3780041-3782880 REVERSE
           LENGTH=393
          Length = 393

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 70/121 (57%), Gaps = 4/121 (3%)

Query: 18  FVTIFMSLYSMGIALLKDIPDVEGDKKFGIYSFPARFGKKRVFWVCVSLFELAFGIALMV 77
           F+T F++L+++ IA+ KD+PDVEGD+KF I +   + G + + ++   L  + +  A+ +
Sbjct: 272 FITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYVSAISL 331

Query: 78  GATSSYMWSKVAMILGNTVLASVVWYRA---KSVNLGSKDSMASFYMLIWKILFAAYMLM 134
                 ++    MI  + +LAS + ++    +  N  +K++++ +Y  IW + +A Y+L 
Sbjct: 332 AFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANY-TKEAISGYYRFIWNLFYAEYLLF 390

Query: 135 P 135
           P
Sbjct: 391 P 391


>AT3G11945.1 | Symbols: PDS2, ATHST, HST | homogentisate
           prenyltransferase | chr3:3780041-3782880 REVERSE
           LENGTH=386
          Length = 386

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 70/121 (57%), Gaps = 4/121 (3%)

Query: 18  FVTIFMSLYSMGIALLKDIPDVEGDKKFGIYSFPARFGKKRVFWVCVSLFELAFGIALMV 77
           F+T F++L+++ IA+ KD+PDVEGD+KF I +   + G + + ++   L  + +  A+ +
Sbjct: 265 FITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRNIAFLGSGLLLVNYVSAISL 324

Query: 78  GATSSYMWSKVAMILGNTVLASVVWYRA---KSVNLGSKDSMASFYMLIWKILFAAYMLM 134
                 ++    MI  + +LAS + ++    +  N  +K++++ +Y  IW + +A Y+L 
Sbjct: 325 AFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANY-TKEAISGYYRFIWNLFYAEYLLF 383

Query: 135 P 135
           P
Sbjct: 384 P 384


>AT3G51820.1 | Symbols: ATG4, G4, CHLG | UbiA prenyltransferase
           family protein | chr3:19216301-19218934 REVERSE
           LENGTH=387
          Length = 387

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)

Query: 10  TIFPRSLIFVTIFMSLYSMGIALLKDIPDVEGDKKFGIYSFPARFGKKRVFWVCV---SL 66
           T+ P  ++ +T+  S+  +GIA++ D   VEGD+  G+ S P  FG +   W+CV    +
Sbjct: 261 TLTP-DVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGAIDI 319

Query: 67  FELAFGIALMVGATSSYMWSKVAMILGNTV 96
            +L+    L+      Y  + VA+I+   V
Sbjct: 320 TQLSVAGYLLASGKPYYALALVALIIPQIV 349