Miyakogusa Predicted Gene

Lj0g3v0317849.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0317849.1 tr|F0S4L0|F0S4L0_PEDSD Dipeptidyl-peptidase III
(Precursor) OS=Pedobacter saltans (strain ATCC
51119,34.73,5e-16,Peptidase_M49,NULL; seg,NULL; NUDIX
HYDROLASE-RELATED,NULL; DIPEPTIDYL PEPTIDASE
III-RELATED,NULL,gene.g24738.t1.1
         (277 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79690.1 | Symbols: atnudt3, NUDT3 | nudix hydrolase homolog ...   365   e-101

>AT1G79690.1 | Symbols: atnudt3, NUDT3 | nudix hydrolase homolog 3 |
           chr1:29985360-29990171 FORWARD LENGTH=772
          Length = 772

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/269 (66%), Positives = 211/269 (78%), Gaps = 5/269 (1%)

Query: 14  SAIRLLAKATKTVREWKGLEYRAAFPVQKPAGANFYPPDMDKKEFEIWKESLGNDEQKEA 73
           SA++LL  ATK +  WKGLEYRAAFPV KP GANFYPPDMDK EF +W   L  +++  A
Sbjct: 292 SAVKLLPGATKAIAGWKGLEYRAAFPVTKPPGANFYPPDMDKMEFTLWLNGLTEEQKHAA 351

Query: 74  TSFFSVIKRHSEFILDS--HPSNSKAG---SSHDLYIVPYSQEYXXXXXXXXXXXXXXGD 128
           T FFSVIKR SE  LD+  H ++S      S+ DLY +PYS+ Y              GD
Sbjct: 352 TGFFSVIKRRSEANLDASDHLASSTKKLPDSNSDLYSIPYSEIYRPFLKKASEFLQKAGD 411

Query: 129 ITDSPSLKSLLHGKADAFLSNDYYDSDIAWMELDSKLDITIGPYETYEDKLFGYKATFEA 188
           +  SPSLK LLH KA+AFLSN+YY+SDIAWM+LDSKLDITIGPYETYED++FGYKATFE 
Sbjct: 412 LVSSPSLKKLLHSKAEAFLSNEYYESDIAWMDLDSKLDITIGPYETYEDEIFGYKATFET 471

Query: 189 YIGIRDDEATAQLKLFGDNLQLLEQNLPMDSAYKSKDVNAAPIRVIQLLYNAGDVGGPQT 248
           +IGIRDD+ATA LKLFGDNL+LLE NLP++S YKS DV+AAPIRVIQL+YN+GDV GPQT
Sbjct: 472 FIGIRDDKATADLKLFGDNLKLLEDNLPLESVYKSTDVSAAPIRVIQLIYNSGDVKGPQT 531

Query: 249 LAFNLPNDERIVNDRGTSMVMLKNVSEAK 277
           +A+NLPNDE+IV DRGTSMVMLKNV EAK
Sbjct: 532 VAYNLPNDEKIVKDRGTSMVMLKNVQEAK 560