Miyakogusa Predicted Gene

Lj0g3v0317569.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0317569.2 Non Chatacterized Hit- tr|I1JAU5|I1JAU5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5853
PE=,92.49,0,Voltage_CLC,Chloride channel, voltage gated;
CBS,Cystathionine beta-synthase, core; CLCHANNEL,Chlori,CUFF.22326.2
         (345 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G26240.1 | Symbols: CLC-D, ATCLC-D | chloride channel D | chr...   521   e-148
AT5G49890.1 | Symbols: CLC-C, ATCLC-C | chloride channel C | chr...   238   4e-63
AT5G33280.1 | Symbols:  | Voltage-gated chloride channel family ...   208   5e-54
AT3G27170.1 | Symbols: CLC-B, ATCLC-B | chloride channel B | chr...   201   5e-52
AT5G40890.1 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride c...   196   2e-50
AT5G40890.2 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride c...   196   2e-50

>AT5G26240.1 | Symbols: CLC-D, ATCLC-D | chloride channel D |
           chr5:9189622-9194347 FORWARD LENGTH=792
          Length = 792

 Score =  521 bits (1341), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/340 (76%), Positives = 290/340 (85%), Gaps = 7/340 (2%)

Query: 1   MFYALAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFL 60
           MFY LAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVV++Y+KLNIEEGTYALLGAASFL
Sbjct: 457 MFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVRFYKKLNIEEGTYALLGAASFL 516

Query: 61  GGSMRMTVSLCVIMVEITNNXXXXXXXXXXXXISKAVGDAFNEGIYDEQARLRGIPLLES 120
           GGSMRMTVSLCVIMVEITNN            ISKAVGDAFNEG+Y+ QARL+GIPLLES
Sbjct: 517 GGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDAFNEGLYEVQARLKGIPLLES 576

Query: 121 RPKYEMRNMTAKEACGSGRVVSFPRVAKVSDVVSILQSNKHNGFPVIDHTRSGEPLVIGL 180
           RPKY MR M AKEAC S +V+S PRV +V+DV SIL SNKHNGFPVIDHTRSGE LVIGL
Sbjct: 577 RPKYHMRQMIAKEACQSQKVISLPRVIRVADVASILGSNKHNGFPVIDHTRSGETLVIGL 636

Query: 181 VLRSHLLVILQSKVDFQHSPLPSDLRGGGRSIRHDYGEFAKPVSSKGICLDDVHLSSDDL 240
           VLRSHLLV+LQSKVDFQHSPLP D     R+IRH + EFAKPVSSKG+C++D+HL+SDDL
Sbjct: 637 VLRSHLLVLLQSKVDFQHSPLPCD--PSARNIRHSFSEFAKPVSSKGLCIEDIHLTSDDL 694

Query: 241 EMFIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVLGLITRKDLLIED 300
           EM+IDLAPFLNPSPY+VPEDMSLTKVYNLFRQLGLRHLFVVPRPSRV+GLITRKDLLIE+
Sbjct: 695 EMYIDLAPFLNPSPYVVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVIGLITRKDLLIEE 754

Query: 301 T-DANTLEL-QATSVRVRHPGKRLMARNADVESPLLNGLL 338
             +++ +EL Q+TSVR R+      A   D   PLL+ LL
Sbjct: 755 NGESSAVELQQSTSVRGRYSET---ATRMDAARPLLDDLL 791


>AT5G49890.1 | Symbols: CLC-C, ATCLC-C | chloride channel C |
           chr5:20288489-20292143 REVERSE LENGTH=779
          Length = 779

 Score =  238 bits (608), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 135/304 (44%), Positives = 192/304 (63%), Gaps = 18/304 (5%)

Query: 3   YALAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGG 62
           Y L ++T+G A+P+G F+P I+ G++YGRLVG  +    +   ++ G ++LLGAASFLGG
Sbjct: 474 YCLGIITYGIAIPSGLFIPVILAGASYGRLVGRLLGPVSQ---LDVGLFSLLGAASFLGG 530

Query: 63  SMRMTVSLCVIMVEITNNXXXXXXXXXXXXISKAVGDAFNEGIYDEQARLRGIPLLESRP 122
           +MRMTVSLCVI++E+TNN            ISK V D FN G+YD+   ++G+P +E   
Sbjct: 531 TMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADCFNRGVYDQIVTMKGLPYMEDHA 590

Query: 123 KYEMRNMTAKEACGSGRVVSFPRVAKVSDVVSILQSNKHNGFPVIDH---TRSGEPLVIG 179
           +  MRN+ AK+   SG ++SF RV KV  +   L+  +HNGFPVID    T + E  + G
Sbjct: 591 EPYMRNLVAKDVV-SGALISFSRVEKVGVIWQALKMTRHNGFPVIDEPPFTEASE--LCG 647

Query: 180 LVLRSHLLVILQ-SKVDFQHSPLPSDLRGGGRSIRHDYGEFAKPVSSKGICLDDVHLSSD 238
           + LRSHLLV+LQ  K   Q +   S +    RS +    +F K    KG+ ++D+ LS +
Sbjct: 648 IALRSHLLVLLQGKKFSKQRTTFGSQIL---RSCKAR--DFGKAGLGKGLKIEDLDLSEE 702

Query: 239 DLEMFIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPR-PSR--VLGLITRKD 295
           ++EM++DL P  N SPY V E +SL K   LFRQLGLRHL VVP+ P R  ++G++TR D
Sbjct: 703 EMEMYVDLHPITNTSPYTVLETLSLAKAAILFRQLGLRHLCVVPKTPGRPPIVGILTRHD 762

Query: 296 LLIE 299
            + E
Sbjct: 763 FMPE 766


>AT5G33280.1 | Symbols:  | Voltage-gated chloride channel family
           protein | chr5:12549280-12552305 FORWARD LENGTH=765
          Length = 765

 Score =  208 bits (529), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 124/301 (41%), Positives = 181/301 (60%), Gaps = 12/301 (3%)

Query: 3   YALAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGG 62
           + L++ ++G   PAG FVP I+ G++YGR VGM +       N+  G +A+LGAASFLGG
Sbjct: 448 FFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLLGS---NSNLNHGLFAVLGAASFLGG 504

Query: 63  SMRMTVSLCVIMVEITNNXXXXXXXXXXXXISKAVGDAFNEGIYDEQARLRGIPLLESRP 122
           +MRMTVS CVI++E+TNN            ISK V D FN  IY+   +L+G P L S  
Sbjct: 505 TMRMTVSTCVILLELTNNLLLLPMMMVVLLISKTVADGFNANIYNLIMKLKGFPYLYSHA 564

Query: 123 KYEMRNMTAKEACGSGRVVSFPRVAKVSDVVSILQSNKHNGFPVIDH-TRSGEPLVIGLV 181
           +  MR +   +   +G +  F  + KV  +V +L++  HNGFPV+D    +  P++ GL+
Sbjct: 565 EPYMRQLLVGDVV-TGPLQVFNGIEKVETIVHVLKTTNHNGFPVVDGPPLAAAPVLHGLI 623

Query: 182 LRSHLLVILQSKVDFQHSPLPSDLRGGGRSIRHDYGEFAKPVSSKGICLDDVHLSSDDLE 241
           LR+H+L +L+ +V F  SP+  D        +    EFAK  S +   ++DV LS ++L 
Sbjct: 624 LRAHILTLLKKRV-FMPSPVACD---SNTLSQFKAEEFAKKGSGRSDKIEDVELSEEELN 679

Query: 242 MFIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSR---VLGLITRKDLLI 298
           M++DL PF N SPY V E MSL K   LFR++G+RHL V+P+ S    V+G++TR D + 
Sbjct: 680 MYLDLHPFSNASPYTVVETMSLAKALILFREVGIRHLLVIPKTSNRPPVVGILTRHDFMP 739

Query: 299 E 299
           E
Sbjct: 740 E 740


>AT3G27170.1 | Symbols: CLC-B, ATCLC-B | chloride channel B |
           chr3:10024147-10026921 FORWARD LENGTH=780
          Length = 780

 Score =  201 bits (512), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 185/312 (59%), Gaps = 29/312 (9%)

Query: 1   MFYALAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFL 60
           ++  L + TFG A P+G F+P I++G+ YGR++G  +  Y    +I++G YA+LGAA+ +
Sbjct: 461 LYCILGLFTFGIATPSGLFLPIILMGAAYGRMLGAAMGSY---TSIDQGLYAVLGAAALM 517

Query: 61  GGSMRMTVSLCVIMVEITNNXXXXXXXXXXXXISKAVGDAFNEGIYDEQARLRGIPLLES 120
            GSMRMTVSLCVI +E+TNN            I+K VGD+FN  IYD    L+G+P LE+
Sbjct: 518 AGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYDIILHLKGLPFLEA 577

Query: 121 RPKYEMRNMTAKEACGSGR--VVSFPRVAKVSDVVSILQSNKHNGFPVIDHTR------- 171
            P+  MRN+T  E  G  +  VV+   V KVS++V +L++  HN FPV+D          
Sbjct: 578 NPEPWMRNLTVGEL-GDAKPPVVTLQGVEKVSNIVDVLKNTTHNAFPVLDEAEVPQVGLA 636

Query: 172 SGEPLVIGLVLRSHLLVILQSKVDFQHSPLPSDLRGGGRSIRHD--YGEFAKPVSSKGIC 229
           +G   + GL+LR+HL+ +L+ +       L    R     +R    + E A+   +    
Sbjct: 637 TGATELHGLILRAHLVKVLKKR-----WFLTEKRRTEEWEVREKFPWDELAEREDN---- 687

Query: 230 LDDVHLSSDDLEMFIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSR--- 286
            DDV ++S ++EM++DL P  N +PY V E+MS+ K   LFRQ+GLRHL +VP+      
Sbjct: 688 FDDVAITSAEMEMYVDLHPLTNTTPYTVMENMSVAKALVLFRQVGLRHLLIVPKIQASGM 747

Query: 287 --VLGLITRKDL 296
             V+G++TR+DL
Sbjct: 748 CPVVGILTRQDL 759


>AT5G40890.1 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride
           channel A | chr5:16381645-16384999 REVERSE LENGTH=775
          Length = 775

 Score =  196 bits (499), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 183/306 (59%), Gaps = 23/306 (7%)

Query: 1   MFYALAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFL 60
           ++  L ++TFG A P+G F+P I++GS YGR++G  +  Y    NI++G YA+LGAAS +
Sbjct: 462 LYCILGLITFGIATPSGLFLPIILMGSAYGRMLGTAMGSY---TNIDQGLYAVLGAASLM 518

Query: 61  GGSMRMTVSLCVIMVEITNNXXXXXXXXXXXXISKAVGDAFNEGIYDEQARLRGIPLLES 120
            GSMRMTVSLCVI +E+TNN            I+K VGD+FN  IY+    L+G+P LE+
Sbjct: 519 AGSMRMTVSLCVIFLELTNNLLLLPITMFVLLIAKTVGDSFNLSIYEIILHLKGLPFLEA 578

Query: 121 RPKYEMRNMTAKEACGSG-RVVSFPRVAKVSDVVSILQSNKHNGFPVID--HTRSGEPLV 177
            P+  MRN+T  E   +   VV+   V KV+++V +L++  HN FPV+D     +G  L 
Sbjct: 579 NPEPWMRNLTVGELNDAKPPVVTLNGVEKVANIVDVLRNTTHNAFPVLDGADQNTGTELH 638

Query: 178 IGLVLRSHLLVILQSKVDFQHSPLPSDLRGGGRSIRHDYGEFAKPV--SSKGICLDDVHL 235
            GL+LR+HL+ +L+ +                R+   +  E   PV  + +    DDV +
Sbjct: 639 -GLILRAHLVKVLKKRWFLNEKR---------RTEEWEVREKFTPVELAEREDNFDDVAI 688

Query: 236 SSDDLEMFIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPR-----PSRVLGL 290
           +S ++++++DL P  N +PY V + MS+ K   LFR +GLRHL VVP+      S V+G+
Sbjct: 689 TSSEMQLYVDLHPLTNTTPYTVVQSMSVAKALVLFRSVGLRHLLVVPKIQASGMSPVIGI 748

Query: 291 ITRKDL 296
           +TR+DL
Sbjct: 749 LTRQDL 754


>AT5G40890.2 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride
           channel A | chr5:16381645-16383821 REVERSE LENGTH=643
          Length = 643

 Score =  196 bits (498), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 183/306 (59%), Gaps = 23/306 (7%)

Query: 1   MFYALAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFL 60
           ++  L ++TFG A P+G F+P I++GS YGR++G  +  Y    NI++G YA+LGAAS +
Sbjct: 330 LYCILGLITFGIATPSGLFLPIILMGSAYGRMLGTAMGSY---TNIDQGLYAVLGAASLM 386

Query: 61  GGSMRMTVSLCVIMVEITNNXXXXXXXXXXXXISKAVGDAFNEGIYDEQARLRGIPLLES 120
            GSMRMTVSLCVI +E+TNN            I+K VGD+FN  IY+    L+G+P LE+
Sbjct: 387 AGSMRMTVSLCVIFLELTNNLLLLPITMFVLLIAKTVGDSFNLSIYEIILHLKGLPFLEA 446

Query: 121 RPKYEMRNMTAKEACGSG-RVVSFPRVAKVSDVVSILQSNKHNGFPVIDHT--RSGEPLV 177
            P+  MRN+T  E   +   VV+   V KV+++V +L++  HN FPV+D     +G  L 
Sbjct: 447 NPEPWMRNLTVGELNDAKPPVVTLNGVEKVANIVDVLRNTTHNAFPVLDGADQNTGTELH 506

Query: 178 IGLVLRSHLLVILQSKVDFQHSPLPSDLRGGGRSIRHDYGEFAKPV--SSKGICLDDVHL 235
            GL+LR+HL+ +L+ +                R+   +  E   PV  + +    DDV +
Sbjct: 507 -GLILRAHLVKVLKKRWFLNEKR---------RTEEWEVREKFTPVELAEREDNFDDVAI 556

Query: 236 SSDDLEMFIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPR-----PSRVLGL 290
           +S ++++++DL P  N +PY V + MS+ K   LFR +GLRHL VVP+      S V+G+
Sbjct: 557 TSSEMQLYVDLHPLTNTTPYTVVQSMSVAKALVLFRSVGLRHLLVVPKIQASGMSPVIGI 616

Query: 291 ITRKDL 296
           +TR+DL
Sbjct: 617 LTRQDL 622