Miyakogusa Predicted Gene
- Lj0g3v0317569.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0317569.1 Non Chatacterized Hit- tr|I1JAU5|I1JAU5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5853
PE=,94.59,0,Voltage_CLC,Chloride channel, voltage gated;
CBS,Cystathionine beta-synthase, core; CLCHANNEL,Chlori,CUFF.22326.1
(422 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G26240.1 | Symbols: CLC-D, ATCLC-D | chloride channel D | chr... 660 0.0
AT5G49890.1 | Symbols: CLC-C, ATCLC-C | chloride channel C | chr... 297 8e-81
AT3G27170.1 | Symbols: CLC-B, ATCLC-B | chloride channel B | chr... 268 5e-72
AT5G33280.1 | Symbols: | Voltage-gated chloride channel family ... 267 1e-71
AT5G40890.1 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride c... 254 9e-68
AT5G40890.2 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride c... 254 9e-68
>AT5G26240.1 | Symbols: CLC-D, ATCLC-D | chloride channel D |
chr5:9189622-9194347 FORWARD LENGTH=792
Length = 792
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/395 (80%), Positives = 348/395 (88%), Gaps = 3/395 (0%)
Query: 29 FIRKCSPCPESDPSSGIECPRPPGMYGNYVNFFCSKDKEYNDLATIFFNTQDDAIRNLFS 88
+RKCSPCPES P SGIECPRPPGMYGNYVNFFC D EYNDLATIFFNTQDDAIRNLFS
Sbjct: 380 LLRKCSPCPESVPDSGIECPRPPGMYGNYVNFFCKTDNEYNDLATIFFNTQDDAIRNLFS 439
Query: 89 AKTINEYSSQSLLTFLVMFYALAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRK 148
AKT+ E+S+QSLLTFL MFY LAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVV++Y+K
Sbjct: 440 AKTMREFSAQSLLTFLAMFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVRFYKK 499
Query: 149 LNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNXXXXXXXXXXXXISKAVGDAFNE 208
LNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNN ISKAVGDAFNE
Sbjct: 500 LNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDAFNE 559
Query: 209 GIYDEQARLRGIPLLESRPKYEMRNMTAKEACGSGRVVSFPRVAKVSDVVSILQSNKHNG 268
G+Y+ QARL+GIPLLESRPKY MR M AKEAC S +V+S PRV +V+DV SIL SNKHNG
Sbjct: 560 GLYEVQARLKGIPLLESRPKYHMRQMIAKEACQSQKVISLPRVIRVADVASILGSNKHNG 619
Query: 269 FPVIDHTRSGEPLVIGLVLRSHLLVILQSKVDFQHSPLPSDLRGGGRSIRHDYGEFAKPV 328
FPVIDHTRSGE LVIGLVLRSHLLV+LQSKVDFQHSPLP D R+IRH + EFAKPV
Sbjct: 620 FPVIDHTRSGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCD--PSARNIRHSFSEFAKPV 677
Query: 329 SSKGICLDDVHLSSDDLEMFIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPR 388
SSKG+C++D+HL+SDDLEM+IDLAPFLNPSPY+VPEDMSLTKVYNLFRQLGLRHLFVVPR
Sbjct: 678 SSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLTKVYNLFRQLGLRHLFVVPR 737
Query: 389 PSRVLGLITRKDLLIEDT-DANTLELQATSSSASR 422
PSRV+GLITRKDLLIE+ +++ +ELQ ++S R
Sbjct: 738 PSRVIGLITRKDLLIEENGESSAVELQQSTSVRGR 772
>AT5G49890.1 | Symbols: CLC-C, ATCLC-C | chloride channel C |
chr5:20288489-20292143 REVERSE LENGTH=779
Length = 779
Score = 297 bits (761), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 172/406 (42%), Positives = 248/406 (61%), Gaps = 26/406 (6%)
Query: 8 FMLALTLVVSMERLCLARYKQFIRKCSPCPESDPSSGIECPRPP--GMYGNYVNFFCSKD 65
F + L + VS+ C A ++ +C+PCP GIE + P G Y +F C +
Sbjct: 378 FKIMLVMAVSILSSCCAFGLPWLSQCTPCP-----IGIEEGKCPSVGRSSIYKSFQCPPN 432
Query: 66 KEYNDLATIFFNTQDDAIRNLFSAKTINEYSSQSLLTFLVMFYALAVVTFGTAVPAGQFV 125
YNDL+++ NT DDAIRNLF++++ NE+ +L F V Y L ++T+G A+P+G F+
Sbjct: 433 -HYNDLSSLLLNTNDDAIRNLFTSRSENEFHISTLAIFFVAVYCLGIITYGIAIPSGLFI 491
Query: 126 PGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNN 185
P I+ G++YGRLVG + + ++ G ++LLGAASFLGG+MRMTVSLCVI++E+TNN
Sbjct: 492 PVILAGASYGRLVGRLLGPVSQ---LDVGLFSLLGAASFLGGTMRMTVSLCVILLELTNN 548
Query: 186 XXXXXXXXXXXXISKAVGDAFNEGIYDEQARLRGIPLLESRPKYEMRNMTAKEACGSGRV 245
ISK V D FN G+YD+ ++G+P +E + MRN+ AK+ SG +
Sbjct: 549 LLMLPLVMLVLLISKTVADCFNRGVYDQIVTMKGLPYMEDHAEPYMRNLVAKDVV-SGAL 607
Query: 246 VSFPRVAKVSDVVSILQSNKHNGFPVIDH---TRSGEPLVIGLVLRSHLLVILQS-KVDF 301
+SF RV KV + L+ +HNGFPVID T + E + G+ LRSHLLV+LQ K
Sbjct: 608 ISFSRVEKVGVIWQALKMTRHNGFPVIDEPPFTEASE--LCGIALRSHLLVLLQGKKFSK 665
Query: 302 QHSPLPSDLRGGGRSIRHDYGEFAKPVSSKGICLDDVHLSSDDLEMFIDLAPFLNPSPYI 361
Q + S + RS + +F K KG+ ++D+ LS +++EM++DL P N SPY
Sbjct: 666 QRTTFGSQIL---RSCKAR--DFGKAGLGKGLKIEDLDLSEEEMEMYVDLHPITNTSPYT 720
Query: 362 VPEDMSLTKVYNLFRQLGLRHLFVVPR-PSR--VLGLITRKDLLIE 404
V E +SL K LFRQLGLRHL VVP+ P R ++G++TR D + E
Sbjct: 721 VLETLSLAKAAILFRQLGLRHLCVVPKTPGRPPIVGILTRHDFMPE 766
>AT3G27170.1 | Symbols: CLC-B, ATCLC-B | chloride channel B |
chr3:10024147-10026921 FORWARD LENGTH=780
Length = 780
Score = 268 bits (685), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 167/407 (41%), Positives = 238/407 (58%), Gaps = 36/407 (8%)
Query: 12 LTLVVSM-ERLCLARYKQFIRKCSPCPESDPSSGIECPRPPGMYGNYVNFFCSKDKEYND 70
L+L VS+ +CL F+ KC PC DPS CP G GN+ F C K YND
Sbjct: 372 LSLTVSLFTSVCLYGLP-FLAKCKPC---DPSIDEICPTN-GRSGNFKQFHCPKGY-YND 425
Query: 71 LATIFFNTQDDAIRNLFSAKTINEYSSQSLLTFLVMFYALAVVTFGTAVPAGQFVPGIMI 130
LAT+ T DDA+RNLFS+ T NE+ SL F V++ L + TFG A P+G F+P I++
Sbjct: 426 LATLLLTTNDDAVRNLFSSNTPNEFGMGSLWIFFVLYCILGLFTFGIATPSGLFLPIILM 485
Query: 131 GSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNXXXXX 190
G+ YGR++G + Y +I++G YA+LGAA+ + GSMRMTVSLCVI +E+TNN
Sbjct: 486 GAAYGRMLGAAMGSYT---SIDQGLYAVLGAAALMAGSMRMTVSLCVIFLELTNNLLLLP 542
Query: 191 XXXXXXXISKAVGDAFNEGIYDEQARLRGIPLLESRPKYEMRNMTAKEACGSGR--VVSF 248
I+K VGD+FN IYD L+G+P LE+ P+ MRN+T E G + VV+
Sbjct: 543 ITMIVLLIAKTVGDSFNPSIYDIILHLKGLPFLEANPEPWMRNLTVGE-LGDAKPPVVTL 601
Query: 249 PRVAKVSDVVSILQSNKHNGFPVIDHTR-------SGEPLVIGLVLRSHLLVILQSKVDF 301
V KVS++V +L++ HN FPV+D +G + GL+LR+HL+ +L+ +
Sbjct: 602 QGVEKVSNIVDVLKNTTHNAFPVLDEAEVPQVGLATGATELHGLILRAHLVKVLKKR--- 658
Query: 302 QHSPLPSDLRGGGRSIRHD--YGEFAKPVSSKGICLDDVHLSSDDLEMFIDLAPFLNPSP 359
L R +R + E A+ + DDV ++S ++EM++DL P N +P
Sbjct: 659 --WFLTEKRRTEEWEVREKFPWDELAEREDN----FDDVAITSAEMEMYVDLHPLTNTTP 712
Query: 360 YIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSR-----VLGLITRKDL 401
Y V E+MS+ K LFRQ+GLRHL +VP+ V+G++TR+DL
Sbjct: 713 YTVMENMSVAKALVLFRQVGLRHLLIVPKIQASGMCPVVGILTRQDL 759
>AT5G33280.1 | Symbols: | Voltage-gated chloride channel family
protein | chr5:12549280-12552305 FORWARD LENGTH=765
Length = 765
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/403 (40%), Positives = 232/403 (57%), Gaps = 17/403 (4%)
Query: 6 LVFMLALTLVVSMERLCLARYKQFIRKCSPCPESDPSSGIECPRPPGMYGNYVNFFCSKD 65
+ + + L +S+ CL F+ C PCP ECP G GN+ + C
Sbjct: 351 VTWKILLACAISIFTSCLLFGLPFLASCQPCPVDALE---ECPTI-GRSGNFKKYQCPPG 406
Query: 66 KEYNDLATIFFNTQDDAIRNLFSAKTINEYSSQSLLTFLVMFYALAVVTFGTAVPAGQFV 125
YNDLA++ FNT DDAI+NLFS T E+ S+L F V + L++ ++G PAG FV
Sbjct: 407 -HYNDLASLIFNTNDDAIKNLFSKNTDFEFHYFSVLVFFVTCFFLSIFSYGIVAPAGLFV 465
Query: 126 PGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNN 185
P I+ G++YGR VGM + N+ G +A+LGAASFLGG+MRMTVS CVI++E+TNN
Sbjct: 466 PVIVTGASYGRFVGMLLGS---NSNLNHGLFAVLGAASFLGGTMRMTVSTCVILLELTNN 522
Query: 186 XXXXXXXXXXXXISKAVGDAFNEGIYDEQARLRGIPLLESRPKYEMRNMTAKEACGSGRV 245
ISK V D FN IY+ +L+G P L S + MR + + +G +
Sbjct: 523 LLLLPMMMVVLLISKTVADGFNANIYNLIMKLKGFPYLYSHAEPYMRQLLVGDVV-TGPL 581
Query: 246 VSFPRVAKVSDVVSILQSNKHNGFPVIDH-TRSGEPLVIGLVLRSHLLVILQSKVDFQHS 304
F + KV +V +L++ HNGFPV+D + P++ GL+LR+H+L +L+ +V F S
Sbjct: 582 QVFNGIEKVETIVHVLKTTNHNGFPVVDGPPLAAAPVLHGLILRAHILTLLKKRV-FMPS 640
Query: 305 PLPSDLRGGGRSIRHDYGEFAKPVSSKGICLDDVHLSSDDLEMFIDLAPFLNPSPYIVPE 364
P+ D + EFAK S + ++DV LS ++L M++DL PF N SPY V E
Sbjct: 641 PVACD---SNTLSQFKAEEFAKKGSGRSDKIEDVELSEEELNMYLDLHPFSNASPYTVVE 697
Query: 365 DMSLTKVYNLFRQLGLRHLFVVPRPSR---VLGLITRKDLLIE 404
MSL K LFR++G+RHL V+P+ S V+G++TR D + E
Sbjct: 698 TMSLAKALILFREVGIRHLLVIPKTSNRPPVVGILTRHDFMPE 740
>AT5G40890.1 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride
channel A | chr5:16381645-16384999 REVERSE LENGTH=775
Length = 775
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 161/409 (39%), Positives = 238/409 (58%), Gaps = 32/409 (7%)
Query: 3 ITKLVFMLALTLVVSMERLCLARYKQFIRKCSPCPESDPSSGIECPRPPGMYGNYVNFFC 62
I K++ L ++L S+ CL F+ +C PC DPS CP G GN+ F C
Sbjct: 368 IHKVLLSLGVSLFTSV---CLFGLP-FLAECKPC---DPSIDEICPTN-GRSGNFKQFNC 419
Query: 63 SKDKEYNDLATIFFNTQDDAIRNLFSAKTINEYSSQSLLTFLVMFYALAVVTFGTAVPAG 122
+ YNDL+T+ T DDA+RN+FS+ T NE+ SL F ++ L ++TFG A P+G
Sbjct: 420 -PNGYYNDLSTLLLTTNDDAVRNIFSSNTPNEFGMVSLWIFFGLYCILGLITFGIATPSG 478
Query: 123 QFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEI 182
F+P I++GS YGR++G + Y NI++G YA+LGAAS + GSMRMTVSLCVI +E+
Sbjct: 479 LFLPIILMGSAYGRMLGTAMGSY---TNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLEL 535
Query: 183 TNNXXXXXXXXXXXXISKAVGDAFNEGIYDEQARLRGIPLLESRPKYEMRNMTAKEACGS 242
TNN I+K VGD+FN IY+ L+G+P LE+ P+ MRN+T E +
Sbjct: 536 TNNLLLLPITMFVLLIAKTVGDSFNLSIYEIILHLKGLPFLEANPEPWMRNLTVGELNDA 595
Query: 243 G-RVVSFPRVAKVSDVVSILQSNKHNGFPVIDHT--RSGEPLVIGLVLRSHLLVILQSKV 299
VV+ V KV+++V +L++ HN FPV+D +G L GL+LR+HL+ +L+ +
Sbjct: 596 KPPVVTLNGVEKVANIVDVLRNTTHNAFPVLDGADQNTGTELH-GLILRAHLVKVLKKRW 654
Query: 300 DFQHSPLPSDLRGGGRSIRHDYGEFAKPV--SSKGICLDDVHLSSDDLEMFIDLAPFLNP 357
R+ + E PV + + DDV ++S ++++++DL P N
Sbjct: 655 FLNEKR---------RTEEWEVREKFTPVELAEREDNFDDVAITSSEMQLYVDLHPLTNT 705
Query: 358 SPYIVPEDMSLTKVYNLFRQLGLRHLFVVPR-----PSRVLGLITRKDL 401
+PY V + MS+ K LFR +GLRHL VVP+ S V+G++TR+DL
Sbjct: 706 TPYTVVQSMSVAKALVLFRSVGLRHLLVVPKIQASGMSPVIGILTRQDL 754
>AT5G40890.2 | Symbols: ATCLC-A, CLC-A, CLCA, ATCLCA | chloride
channel A | chr5:16381645-16383821 REVERSE LENGTH=643
Length = 643
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 161/409 (39%), Positives = 238/409 (58%), Gaps = 32/409 (7%)
Query: 3 ITKLVFMLALTLVVSMERLCLARYKQFIRKCSPCPESDPSSGIECPRPPGMYGNYVNFFC 62
I K++ L ++L S+ CL F+ +C PC DPS CP G GN+ F C
Sbjct: 236 IHKVLLSLGVSLFTSV---CLFGLP-FLAECKPC---DPSIDEICPTN-GRSGNFKQFNC 287
Query: 63 SKDKEYNDLATIFFNTQDDAIRNLFSAKTINEYSSQSLLTFLVMFYALAVVTFGTAVPAG 122
+ YNDL+T+ T DDA+RN+FS+ T NE+ SL F ++ L ++TFG A P+G
Sbjct: 288 -PNGYYNDLSTLLLTTNDDAVRNIFSSNTPNEFGMVSLWIFFGLYCILGLITFGIATPSG 346
Query: 123 QFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEI 182
F+P I++GS YGR++G + Y NI++G YA+LGAAS + GSMRMTVSLCVI +E+
Sbjct: 347 LFLPIILMGSAYGRMLGTAMGSYT---NIDQGLYAVLGAASLMAGSMRMTVSLCVIFLEL 403
Query: 183 TNNXXXXXXXXXXXXISKAVGDAFNEGIYDEQARLRGIPLLESRPKYEMRNMTAKEACGS 242
TNN I+K VGD+FN IY+ L+G+P LE+ P+ MRN+T E +
Sbjct: 404 TNNLLLLPITMFVLLIAKTVGDSFNLSIYEIILHLKGLPFLEANPEPWMRNLTVGELNDA 463
Query: 243 G-RVVSFPRVAKVSDVVSILQSNKHNGFPVIDHT--RSGEPLVIGLVLRSHLLVILQSKV 299
VV+ V KV+++V +L++ HN FPV+D +G L GL+LR+HL+ +L+ +
Sbjct: 464 KPPVVTLNGVEKVANIVDVLRNTTHNAFPVLDGADQNTGTELH-GLILRAHLVKVLKKRW 522
Query: 300 DFQHSPLPSDLRGGGRSIRHDYGEFAKPV--SSKGICLDDVHLSSDDLEMFIDLAPFLNP 357
R+ + E PV + + DDV ++S ++++++DL P N
Sbjct: 523 FLNEKR---------RTEEWEVREKFTPVELAEREDNFDDVAITSSEMQLYVDLHPLTNT 573
Query: 358 SPYIVPEDMSLTKVYNLFRQLGLRHLFVVPR-----PSRVLGLITRKDL 401
+PY V + MS+ K LFR +GLRHL VVP+ S V+G++TR+DL
Sbjct: 574 TPYTVVQSMSVAKALVLFRSVGLRHLLVVPKIQASGMSPVIGILTRQDL 622