Miyakogusa Predicted Gene

Lj0g3v0317369.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0317369.1 Non Chatacterized Hit- tr|F4L1J3|F4L1J3_HALH1
Putative uncharacterized protein OS=Haliscomenobacter
,33.78,4e-18,MoCo carrier protein-like,NULL; no description,NULL;
Lysine_decarbox,Cytokinin riboside 5'-monophosp,CUFF.21498.1
         (303 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50575.1 | Symbols:  | Putative lysine decarboxylase family p...   372   e-103
AT2G35990.1 | Symbols:  | Putative lysine decarboxylase family p...    50   1e-06

>AT1G50575.1 | Symbols:  | Putative lysine decarboxylase family
           protein | chr1:18728862-18730296 REVERSE LENGTH=306
          Length = 306

 Score =  372 bits (954), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 173/256 (67%), Positives = 213/256 (83%), Gaps = 2/256 (0%)

Query: 28  FCKREHSSVGFKF--SKRKANQRAVFLSKQESVDLDERKSPNEVREEIKQCYELINRLGR 85
             +R+  S+  +F  S R  + RA+     +S D  ER SP EV++E++ C++L++RLGR
Sbjct: 30  LTERDPISLNLRFDHSIRAYSARALKCRSVKSEDFVERSSPFEVKKELEICFDLVHRLGR 89

Query: 86  GALYLGSSRMGPGHSHYLQAKELAKEIANLLDCTTWSGAGPGLMDAVTQGALLAGKPIGG 145
           G +YLGS+R+ P HSHYLQA+EL++E A LLDCTTWSGAGPGLMDAVT+GAL A KP+GG
Sbjct: 90  GIVYLGSARIPPNHSHYLQAQELSREAATLLDCTTWSGAGPGLMDAVTEGALEAEKPVGG 149

Query: 146 FKIGKEAGEWTASNFHPYLPSGNYLTCRFFSARKHGLVDAVVRSNSSDKTAVVALPGGVG 205
            KI KEAGEWTAS FHPYLP  NY TCRFFSARKHGLVDAV+R+N S+KTA++ALPGG+G
Sbjct: 150 IKIEKEAGEWTASKFHPYLPPQNYHTCRFFSARKHGLVDAVIRNNVSEKTAIIALPGGIG 209

Query: 206 TLDELFEILALIQLERIGSKLPVPFLLMNYDSFYSKLLDFLNVCEDWGTVSKGEVASLWK 265
           TLDE+FEILALIQLERIGS LPVPF++MNYD+FYSKLL+F+  CE+ GTVSKGEV++LWK
Sbjct: 210 TLDEMFEILALIQLERIGSALPVPFIVMNYDAFYSKLLEFIETCENLGTVSKGEVSALWK 269

Query: 266 VCNSNSEALAYLADFY 281
           VCN+N EAL YLA+FY
Sbjct: 270 VCNNNFEALTYLAEFY 285


>AT2G35990.1 | Symbols:  | Putative lysine decarboxylase family
           protein | chr2:15114070-15116647 FORWARD LENGTH=213
          Length = 213

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 87/212 (41%), Gaps = 24/212 (11%)

Query: 78  ELINRLGRGALYLGSSRMGPGHSHYLQAKELAKEIANLLDCTTWSGAGPGLMDAVTQGAL 137
           E  +R  R  ++ GSS  G   +++  A +LA ++        + G   GLM  ++Q   
Sbjct: 3   ETKSRFRRICVFCGSSS-GNKTTYHDAALQLAHQLVERNIDLVYGGGSVGLMGLISQAVH 61

Query: 138 LAGKPIGGFKIGKEAG--EWTASNFHPYLPSGNYLTCRFFSARKHGLVDAVVRSNSSDKT 195
             G+ + G  I K     E T  +       G  +T      RK  +             
Sbjct: 62  DGGRHVLGI-IPKSLAPREITGESI------GEVITVSTMHQRKAEM--------GRQAD 106

Query: 196 AVVALPGGVGTLDELFEILALIQLERIGSKLPVPFLLMNYDSFYSKLLDFLNVCEDWGTV 255
           A +ALPGG GT +EL E++   QL  I +K   P  L+N D FY  LL F++   D G V
Sbjct: 107 AFIALPGGYGTFEELLEVITWSQL-GIHTK---PVGLLNVDGFYDSLLTFIDKAVDEGFV 162

Query: 256 SKGEVASLWKVCNSNSEALAYLADFYCISSSD 287
           S    A    V   N+  L  L + Y     D
Sbjct: 163 SS--TARRIIVSAPNAPQLLQLLEEYVPKHDD 192