Miyakogusa Predicted Gene
- Lj0g3v0317209.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0317209.2 Non Chatacterized Hit- tr|I1HT42|I1HT42_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,27.79,4e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; seg,NULL,CUFF.21461.2
(490 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60210.2 | Symbols: RIP5 | ROP interactive partner 5 | chr5:2... 264 1e-70
AT5G60210.1 | Symbols: RIP5 | ROP interactive partner 5 | chr5:2... 264 1e-70
AT2G37080.1 | Symbols: RIP3 | ROP interactive partner 3 | chr2:1... 181 1e-45
AT3G53350.3 | Symbols: RIP4 | ROP interactive partner 4 | chr3:1... 100 2e-21
AT3G53350.2 | Symbols: RIP4 | ROP interactive partner 4 | chr3:1... 100 2e-21
AT3G53350.1 | Symbols: RIP4 | ROP interactive partner 4 | chr3:1... 96 4e-20
>AT5G60210.2 | Symbols: RIP5 | ROP interactive partner 5 |
chr5:24243529-24245889 REVERSE LENGTH=564
Length = 564
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 206/544 (37%), Positives = 301/544 (55%), Gaps = 82/544 (15%)
Query: 1 MQTPKTRTSSYGVPHRVCPRVAPLLKPPALDINSALSLSQA-KKTSNDRSPKVIERKSPR 59
MQT K R S VP +V PR A LK AL+ S+ S A +T D+SP V+ R+SPR
Sbjct: 1 MQTQKARNGSPDVPKKVSPRAARPLKIAALEPESSSSPISATNRTPKDKSPNVLNRRSPR 60
Query: 60 SLVPERKRPSRISELESQISQLKGDLKKVKDQLNFSELSKKQAQQDAKESKEQMLSLSVK 119
S V E+KRPSRI+ELE +SQL+ +LKK KDQ++ SE SKKQA+Q+A+ES++Q+ +S K
Sbjct: 61 SPVSEKKRPSRITELELLVSQLQEELKKAKDQISVSETSKKQAEQEAEESRKQLQEVSSK 120
Query: 120 LEDSQQQLLKLS-------DNSTLLISAIS----------------------EIQQLKVQ 150
LE+SQ Q ++ S +L+ ++S EI+QLK+Q
Sbjct: 121 LEESQNQFVETSALEEETDKTGSLVFQSVSQECDWEFSATAGERAGLAAVAHEIRQLKLQ 180
Query: 151 LELIANCENAHTQIAE--SSEVELLNLKHNLAESLSLVKNMSSQI-------TEDPKLVN 201
+E++A+ E H + AE +SEV+L L+ NL ++L V+N +Q+ E L
Sbjct: 181 IEMVASSEAGHVKQAELYNSEVQL--LRGNLMDTLFHVENFRNQLKDCEISEAETEALAT 238
Query: 202 ETLRRLEAAKRTVESLRADAAKAVHGYNSAALELEQSRARLNLLETLVTKFDSGLISNNC 261
ETLR+LE AK+ VE L++D KAV Y A+ELEQS++R+ LE LV K
Sbjct: 239 ETLRQLENAKKAVEELKSDGTKAVESYKKMAVELEQSKSRMVWLEALVNKLQ-------- 290
Query: 262 NNSRNFADNANLEQEDERLKNIEDPNDIEPEVSFLRYEVGRLRCGVESAQTKLLEEQIQN 321
NN + ++ L ++ E L+ E N+++ EVS LR EV RLR +E++ K E ++
Sbjct: 291 NNPADLENHEILLKDYESLRRGE-SNEMDEEVSSLRCEVERLRAALEASDKKDQEGNVEA 349
Query: 322 IVKMKNAHESIERIKSE--SSQKVSXXXXXXXXXXXXXXXXXXXXMDKETELQGIVXXXX 379
++ RI++E S K++ MDKETELQ I
Sbjct: 350 SSRL--------RIQAELQSELKIA---------KSEIDELKARLMDKETELQFISEERD 392
Query: 380 XXXXXXXXSI------AKHSRLNECVAELNSDLIKKERELQSISQDNEMLKMEIN----- 428
+ A+ +L E + L +DL+ KE ELQ +S +NE LK +I+
Sbjct: 393 NFSMKLMKNQKEIDVEAELKKLREAIENLKADLMDKETELQIVSDENETLKSDIHKSETD 452
Query: 429 --EAVMKLELVTAEAEGSKQNAERLAEKLEVVQAAMSETDAEVRRLRVQSDQWRKAAEAA 486
+A +KL + EA+ S + A R+ E+LE QA+ SE + E+R+L+VQS+QWRKAAEAA
Sbjct: 453 VQDAFLKLGIAMEEADKSSKKAVRVTEQLEATQASNSEMETELRKLKVQSNQWRKAAEAA 512
Query: 487 AATI 490
A +
Sbjct: 513 TAML 516
>AT5G60210.1 | Symbols: RIP5 | ROP interactive partner 5 |
chr5:24243529-24245889 REVERSE LENGTH=564
Length = 564
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 206/544 (37%), Positives = 301/544 (55%), Gaps = 82/544 (15%)
Query: 1 MQTPKTRTSSYGVPHRVCPRVAPLLKPPALDINSALSLSQA-KKTSNDRSPKVIERKSPR 59
MQT K R S VP +V PR A LK AL+ S+ S A +T D+SP V+ R+SPR
Sbjct: 1 MQTQKARNGSPDVPKKVSPRAARPLKIAALEPESSSSPISATNRTPKDKSPNVLNRRSPR 60
Query: 60 SLVPERKRPSRISELESQISQLKGDLKKVKDQLNFSELSKKQAQQDAKESKEQMLSLSVK 119
S V E+KRPSRI+ELE +SQL+ +LKK KDQ++ SE SKKQA+Q+A+ES++Q+ +S K
Sbjct: 61 SPVSEKKRPSRITELELLVSQLQEELKKAKDQISVSETSKKQAEQEAEESRKQLQEVSSK 120
Query: 120 LEDSQQQLLKLS-------DNSTLLISAIS----------------------EIQQLKVQ 150
LE+SQ Q ++ S +L+ ++S EI+QLK+Q
Sbjct: 121 LEESQNQFVETSALEEETDKTGSLVFQSVSQECDWEFSATAGERAGLAAVAHEIRQLKLQ 180
Query: 151 LELIANCENAHTQIAE--SSEVELLNLKHNLAESLSLVKNMSSQI-------TEDPKLVN 201
+E++A+ E H + AE +SEV+L L+ NL ++L V+N +Q+ E L
Sbjct: 181 IEMVASSEAGHVKQAELYNSEVQL--LRGNLMDTLFHVENFRNQLKDCEISEAETEALAT 238
Query: 202 ETLRRLEAAKRTVESLRADAAKAVHGYNSAALELEQSRARLNLLETLVTKFDSGLISNNC 261
ETLR+LE AK+ VE L++D KAV Y A+ELEQS++R+ LE LV K
Sbjct: 239 ETLRQLENAKKAVEELKSDGTKAVESYKKMAVELEQSKSRMVWLEALVNKLQ-------- 290
Query: 262 NNSRNFADNANLEQEDERLKNIEDPNDIEPEVSFLRYEVGRLRCGVESAQTKLLEEQIQN 321
NN + ++ L ++ E L+ E N+++ EVS LR EV RLR +E++ K E ++
Sbjct: 291 NNPADLENHEILLKDYESLRRGE-SNEMDEEVSSLRCEVERLRAALEASDKKDQEGNVEA 349
Query: 322 IVKMKNAHESIERIKSE--SSQKVSXXXXXXXXXXXXXXXXXXXXMDKETELQGIVXXXX 379
++ RI++E S K++ MDKETELQ I
Sbjct: 350 SSRL--------RIQAELQSELKIA---------KSEIDELKARLMDKETELQFISEERD 392
Query: 380 XXXXXXXXSI------AKHSRLNECVAELNSDLIKKERELQSISQDNEMLKMEIN----- 428
+ A+ +L E + L +DL+ KE ELQ +S +NE LK +I+
Sbjct: 393 NFSMKLMKNQKEIDVEAELKKLREAIENLKADLMDKETELQIVSDENETLKSDIHKSETD 452
Query: 429 --EAVMKLELVTAEAEGSKQNAERLAEKLEVVQAAMSETDAEVRRLRVQSDQWRKAAEAA 486
+A +KL + EA+ S + A R+ E+LE QA+ SE + E+R+L+VQS+QWRKAAEAA
Sbjct: 453 VQDAFLKLGIAMEEADKSSKKAVRVTEQLEATQASNSEMETELRKLKVQSNQWRKAAEAA 512
Query: 487 AATI 490
A +
Sbjct: 513 TAML 516
>AT2G37080.1 | Symbols: RIP3 | ROP interactive partner 3 |
chr2:15581565-15584057 REVERSE LENGTH=583
Length = 583
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 181/558 (32%), Positives = 271/558 (48%), Gaps = 108/558 (19%)
Query: 1 MQTPKTRTSSYGVPHR----VCPRVAPLLKPPALDINSALSLSQAKKTSNDRSPKVI-ER 55
MQTPK R S VP + P+ A LK D S S + +T +SPKV+ +R
Sbjct: 1 MQTPKPRPGSLEVPQKKSPASTPKTARKLKTSESDPVS--SPNTKIRTPKTQSPKVVADR 58
Query: 56 KSPRSLVPE--RKRPSRISELESQISQLKGDLKKVKDQLNFSELSKKQAQQDAKESKEQM 113
+SPR+ V E +KR + EL SQISQL+ +LKK K+QL+ SE KK+AQ A+E+K+Q+
Sbjct: 59 RSPRTPVNEIQKKRTGKTPELASQISQLQEELKKAKEQLSASEALKKEAQDQAEETKQQL 118
Query: 114 LSLSVKLEDSQ-QQLLKLSD-------------------NSTLLISAISEIQQLKVQLEL 153
+ ++ EDS+ +L KLS +S L S ++E+Q+LK QL
Sbjct: 119 MEINAS-EDSRIDELRKLSQERDKAWQSELEAMQRQHAMDSAALSSTMNEVQKLKAQL-- 175
Query: 154 IANCENAHTQIAESSEVELLNLKHNLAESLSLVKNMSSQITEDPK--------LVNETLR 205
+ES VE NL+ L E+LSLV+ + ++ D K +V+ T +
Sbjct: 176 -----------SESENVE--NLRMELNETLSLVEKLRGELF-DAKEGEAQAHEIVSGTEK 221
Query: 206 RLEAAKRTVESLRADAAKAVHGYNSAALELEQSRARLNLLETLVTKFDSGLISNNCNNSR 265
+LE A T+E LR+D K NS ELEQS++ + LE LV +
Sbjct: 222 QLEIANLTLEMLRSDGMKMSEACNSLTTELEQSKSEVRSLEQLVRQ-------------- 267
Query: 266 NFADNANLEQEDERLKNIE-DPNDIEP---EVSFLRYEVGRLRCGVESAQTKLLEEQIQN 321
LE+EDE N D + +E E++ R E+ +L+ VE + + EE IQ+
Sbjct: 268 -------LEEEDEARGNANGDSSSVEELKEEINVARQEISQLKSAVEVTERRYHEEYIQS 320
Query: 322 IVKMKNAHESIERIKSESSQKVSXXXXXXXXXXXXXXXXXXXXMDKETELQGIVXXXX-- 379
++++ A+E ++ +KS +Q+ + MDKE +L+ +V
Sbjct: 321 TLQIRTAYEQVDEVKSGYAQREAELGEELKKTKAERDSLHERLMDKEAKLRILVDENEIL 380
Query: 380 ----------------XXXXXXXXSIAKHSRLNECVAELNSDLIKKERELQSISQDNEML 423
+ +L V EL ++L+ KE ELQS+ E L
Sbjct: 381 NSKIKEKEEVYLNLENSLNQNEPEDTGELKKLESDVMELRANLMDKEMELQSVMSQYESL 440
Query: 424 KME-----------INEAVMKLELVTAEAEGSKQNAERLAEKLEVVQAAMSETDAEVRRL 472
+ E I+EA+ KL +T EA+ S + AE E+L Q +E +AE+RRL
Sbjct: 441 RSEMETMQSEKNKAIDEALAKLGSLTEEADKSGKRAENATEQLGAAQVTNTELEAELRRL 500
Query: 473 RVQSDQWRKAAEAAAATI 490
+VQ DQWRKAAEAAA +
Sbjct: 501 KVQCDQWRKAAEAAATML 518
>AT3G53350.3 | Symbols: RIP4 | ROP interactive partner 4 |
chr3:19780190-19781555 REVERSE LENGTH=394
Length = 394
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 216/495 (43%), Gaps = 134/495 (27%)
Query: 1 MQTPKTRTSSYGVPHRVCPRVAP----LLKPPALDINSALSLSQAKKTSNDRSPKVI-ER 55
MQTPK+R S +P + P AP LKP + A S + K S + PKV+ +R
Sbjct: 1 MQTPKSRPGSLELPQKKSPLPAPKVVRRLKP-----SGAESDPKTKTISKTQIPKVVADR 55
Query: 56 KSPRSLVPERKRPSRISELESQISQLKGDLKKVKDQLNFSELSKKQAQQDAKESKEQMLS 115
+S R + E+KR RI ELES ISQL+ +LKK K++LN SE K++AQ++A
Sbjct: 56 RSARIPLNEKKRTGRIPELESTISQLQEELKKAKEELNRSEALKREAQEEA--------- 106
Query: 116 LSVKLEDSQQQLLKLSDNSTLLISAISEIQQLKVQLELIANCENAHTQIAESSEVELLNL 175
ED++ QL+ ++ + S I E+++L + E T SE+E +
Sbjct: 107 -----EDAKHQLMDINASED---SRIEELRKL--------SQERDKTW---QSELEAMQR 147
Query: 176 KHNLAESLSLVKNMSSQITEDPKLVNETLRRLEAAKRTVESLRADAAKAVHGYNSAALEL 235
+H + + +SS I E KL ++ + EL
Sbjct: 148 QHGMDSTA-----LSSAINEVQKLKSKLF-------------------------ESESEL 177
Query: 236 EQSRARLNLLETLVTKFDSGLISNNCNNSRNFADNANLEQEDERLKNIEDPNDIEPEVSF 295
EQS+ + LE LV + + + NSR+ + + +E +++ ++
Sbjct: 178 EQSKYEVRSLEKLVRQLEEERV-----NSRDSSSSMEVE-------------ELKEAMNL 219
Query: 296 LRYEVGRLRCGVESAQTKLLEEQIQNIVKMKNAHESIERIKSESSQKVSXXXXXXXXXXX 355
R E+ +L+ VE+A+T+ EE IQ+ +++++A+E E +KS SQ+ +
Sbjct: 220 SRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYEQTEAVKSRYSQREAELTEELNRTKD 279
Query: 356 XXXXXXXXXMDKETELQGIVXXXXXXXXXXXXSIAKHSRLNECVAELNSDLIKKERELQS 415
M+K E S +L + E+ L+ KE ELQ
Sbjct: 280 EIEGLRKELMEKVKE---------------DESTGDLKKLESDLMEVRGSLMDKEMELQ- 323
Query: 416 ISQDNEMLKMEINEAVMKLELVTAEAEGSKQNAERLAEKLEVVQAAMSETDAEVRRLRVQ 475
I + M+ ++ TA E +AE++R+++Q
Sbjct: 324 -----------ILRSAMEKKVETANTEA---------------------MEAELKRVKIQ 351
Query: 476 SDQWRKAAEAAAATI 490
+QWRKAAE AA+ +
Sbjct: 352 CEQWRKAAETAASIL 366
>AT3G53350.2 | Symbols: RIP4 | ROP interactive partner 4 |
chr3:19780190-19781555 REVERSE LENGTH=394
Length = 394
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 216/495 (43%), Gaps = 134/495 (27%)
Query: 1 MQTPKTRTSSYGVPHRVCPRVAP----LLKPPALDINSALSLSQAKKTSNDRSPKVI-ER 55
MQTPK+R S +P + P AP LKP + A S + K S + PKV+ +R
Sbjct: 1 MQTPKSRPGSLELPQKKSPLPAPKVVRRLKP-----SGAESDPKTKTISKTQIPKVVADR 55
Query: 56 KSPRSLVPERKRPSRISELESQISQLKGDLKKVKDQLNFSELSKKQAQQDAKESKEQMLS 115
+S R + E+KR RI ELES ISQL+ +LKK K++LN SE K++AQ++A
Sbjct: 56 RSARIPLNEKKRTGRIPELESTISQLQEELKKAKEELNRSEALKREAQEEA--------- 106
Query: 116 LSVKLEDSQQQLLKLSDNSTLLISAISEIQQLKVQLELIANCENAHTQIAESSEVELLNL 175
ED++ QL+ ++ + S I E+++L + E T SE+E +
Sbjct: 107 -----EDAKHQLMDINASED---SRIEELRKL--------SQERDKTW---QSELEAMQR 147
Query: 176 KHNLAESLSLVKNMSSQITEDPKLVNETLRRLEAAKRTVESLRADAAKAVHGYNSAALEL 235
+H + + +SS I E KL ++ + EL
Sbjct: 148 QHGMDSTA-----LSSAINEVQKLKSKLF-------------------------ESESEL 177
Query: 236 EQSRARLNLLETLVTKFDSGLISNNCNNSRNFADNANLEQEDERLKNIEDPNDIEPEVSF 295
EQS+ + LE LV + + + NSR+ + + +E +++ ++
Sbjct: 178 EQSKYEVRSLEKLVRQLEEERV-----NSRDSSSSMEVE-------------ELKEAMNL 219
Query: 296 LRYEVGRLRCGVESAQTKLLEEQIQNIVKMKNAHESIERIKSESSQKVSXXXXXXXXXXX 355
R E+ +L+ VE+A+T+ EE IQ+ +++++A+E E +KS SQ+ +
Sbjct: 220 SRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYEQTEAVKSRYSQREAELTEELNRTKD 279
Query: 356 XXXXXXXXXMDKETELQGIVXXXXXXXXXXXXSIAKHSRLNECVAELNSDLIKKERELQS 415
M+K E S +L + E+ L+ KE ELQ
Sbjct: 280 EIEGLRKELMEKVKE---------------DESTGDLKKLESDLMEVRGSLMDKEMELQ- 323
Query: 416 ISQDNEMLKMEINEAVMKLELVTAEAEGSKQNAERLAEKLEVVQAAMSETDAEVRRLRVQ 475
I + M+ ++ TA E +AE++R+++Q
Sbjct: 324 -----------ILRSAMEKKVETANTEA---------------------MEAELKRVKIQ 351
Query: 476 SDQWRKAAEAAAATI 490
+QWRKAAE AA+ +
Sbjct: 352 CEQWRKAAETAASIL 366
>AT3G53350.1 | Symbols: RIP4 | ROP interactive partner 4 |
chr3:19780190-19781555 REVERSE LENGTH=396
Length = 396
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 217/499 (43%), Gaps = 140/499 (28%)
Query: 1 MQTPKTRTSSYGVPHRVCPRVAP----LLKPPALDINSALSLSQAKKTSNDRSPKVI-ER 55
MQTPK+R S +P + P AP LKP + A S + K S + PKV+ +R
Sbjct: 1 MQTPKSRPGSLELPQKKSPLPAPKVVRRLKP-----SGAESDPKTKTISKTQIPKVVADR 55
Query: 56 KSPRSLVP----ERKRPSRISELESQISQLKGDLKKVKDQLNFSELSKKQAQQDAKESKE 111
+S R +P ++KR RI ELES ISQL+ +LKK K++LN SE K++AQ++A
Sbjct: 56 RSAR--IPLNEIQKKRTGRIPELESTISQLQEELKKAKEELNRSEALKREAQEEA----- 108
Query: 112 QMLSLSVKLEDSQQQLLKLSDNSTLLISAISEIQQLKVQLELIANCENAHTQIAESSEVE 171
ED++ QL+ ++ + S I E+++L + E T SE+E
Sbjct: 109 ---------EDAKHQLMDINASED---SRIEELRKL--------SQERDKTW---QSELE 145
Query: 172 LLNLKHNLAESLSLVKNMSSQITEDPKLVNETLRRLEAAKRTVESLRADAAKAVHGYNSA 231
+ +H + + +SS I E KL ++ +
Sbjct: 146 AMQRQHGMDSTA-----LSSAINEVQKLKSKLF-------------------------ES 175
Query: 232 ALELEQSRARLNLLETLVTKFDSGLISNNCNNSRNFADNANLEQEDERLKNIEDPNDIEP 291
ELEQS+ + LE LV + + + NSR+ + + +E +++
Sbjct: 176 ESELEQSKYEVRSLEKLVRQLEEERV-----NSRDSSSSMEVE-------------ELKE 217
Query: 292 EVSFLRYEVGRLRCGVESAQTKLLEEQIQNIVKMKNAHESIERIKSESSQKVSXXXXXXX 351
++ R E+ +L+ VE+A+T+ EE IQ+ +++++A+E E +KS SQ+ +
Sbjct: 218 AMNLSRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYEQTEAVKSRYSQREAELTEELN 277
Query: 352 XXXXXXXXXXXXXMDKETELQGIVXXXXXXXXXXXXSIAKHSRLNECVAELNSDLIKKER 411
M+K E S +L + E+ L+ KE
Sbjct: 278 RTKDEIEGLRKELMEKVKE---------------DESTGDLKKLESDLMEVRGSLMDKEM 322
Query: 412 ELQSISQDNEMLKMEINEAVMKLELVTAEAEGSKQNAERLAEKLEVVQAAMSETDAEVRR 471
ELQ I + M+ ++ TA E +AE++R
Sbjct: 323 ELQ------------ILRSAMEKKVETANTEA---------------------MEAELKR 349
Query: 472 LRVQSDQWRKAAEAAAATI 490
+++Q +QWRKAAE AA+ +
Sbjct: 350 VKIQCEQWRKAAETAASIL 368