Miyakogusa Predicted Gene

Lj0g3v0317039.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0317039.1 Non Chatacterized Hit- tr|Q55EP8|Q55EP8_DICDI
Putative uncharacterized protein OS=Dictyostelium
disc,36,4e-19,YbaK,YbaK/aminoacyl-tRNA synthetase-associated domain;
YbaK/ProRS associated domain,YbaK/aminoacyl-t,CUFF.21441.1
         (226 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16510.1 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associa...   312   1e-85

>AT4G16510.1 | Symbols:  | YbaK/aminoacyl-tRNA synthetase-associated
           domain | chr4:9302816-9304869 FORWARD LENGTH=232
          Length = 232

 Score =  312 bits (799), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 150/225 (66%), Positives = 173/225 (76%), Gaps = 4/225 (1%)

Query: 4   EEAMAELERVQTHLLQRISKLEHSLLXXXXXXXXXXX----XXXXVARLSSILRTNGVDD 59
           E A AELER+Q  +L +IS LE S L                   V RLS+IL++ GV+D
Sbjct: 8   ETAAAELERLQIEILHKISILESSFLPQNSSAAPSPSLPVDENETVTRLSTILQSGGVND 67

Query: 60  FSFKRVPSDYYDSPLEVRRDALAAASIHHLCKSIVLVNTQAPSNVVDCSDRKNSKYYVVI 119
           F FKRV +DYYD PLE RRD L A+S+ HLCKSIVLVNTQA SN++DCSD  NSKYYVV+
Sbjct: 68  FCFKRVATDYYDWPLESRRDVLGASSVDHLCKSIVLVNTQAASNILDCSDPNNSKYYVVV 127

Query: 120 VQYTARFNAEAVKSFLFSLNNGSIAKKKFNLRLAPEETSTELTGFGHNAVTCVGMKTDIP 179
           VQYTARFNAEAVK FL+SLN G I KK+FNLRLAPEETS +LTGF HN VTC+GMKT+IP
Sbjct: 128 VQYTARFNAEAVKQFLYSLNEGKIPKKRFNLRLAPEETSIKLTGFEHNGVTCIGMKTNIP 187

Query: 180 VILDEAIVKLTPDFFWLGGGEVDLKLGIRTSQLIRFINPFIVNCS 224
           VILDEAI KL PDFFWLGGGE+DLKLG+RTS+ + F+ PFIV CS
Sbjct: 188 VILDEAITKLKPDFFWLGGGEIDLKLGVRTSEFLEFVKPFIVPCS 232