Miyakogusa Predicted Gene
- Lj0g3v0316919.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0316919.1 Non Chatacterized Hit- tr|K4B3C0|K4B3C0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,30.61,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR_2,Pentatricopepti,CUFF.21432.1
(377 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 191 7e-49
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 7e-34
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 140 1e-33
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 4e-32
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 6e-32
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 7e-32
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 1e-31
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 132 4e-31
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 4e-31
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 6e-31
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 9e-31
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 9e-31
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 1e-30
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 5e-30
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 7e-30
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 1e-29
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 2e-29
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 3e-29
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 125 5e-29
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 6e-29
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 124 8e-29
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 1e-27
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 1e-27
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 1e-27
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 4e-27
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 5e-27
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 1e-26
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 3e-26
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 114 9e-26
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 3e-25
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 5e-25
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 7e-25
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 111 8e-25
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 8e-25
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 3e-24
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 7e-24
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 108 9e-24
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 106 2e-23
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 7e-23
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 103 2e-22
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 8e-22
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 101 9e-22
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 100 2e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 99 4e-21
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 4e-21
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 8e-21
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 96 4e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 96 5e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 96 6e-20
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 7e-20
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 9e-20
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 5e-19
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 89 5e-18
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 89 6e-18
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 9e-17
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 84 2e-16
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 83 4e-16
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 80 3e-15
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 78 8e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 76 3e-14
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 76 5e-14
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 5e-13
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 70 2e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 68 1e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 67 2e-11
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 3e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 62 9e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 61 1e-09
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 60 2e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 60 4e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 56 3e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 56 4e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 55 6e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 54 1e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 51 1e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 51 2e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 50 3e-06
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 49 6e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 49 7e-06
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 9e-06
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 9e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 161/319 (50%), Gaps = 45/319 (14%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T+ I +C G M M +GL ++RTYT+L+ F + +++AY+VL EM D
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
GFSPSV TYN L+ +C ++ +A +L M ++GLSPDV Y+T+++ G + ++D
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS-GFCRSYDVD 467
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
AL K +MVEKGI P TYS LI C +RR EA DL+ EMLR GL E YT+L+
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 266 NAFCLEGEFSKVFHLHDAI--KGFLPDFVT---------------------------RFS 296
NA+C+EG+ K LH+ + KG LPD VT
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 297 PSLVTYN---------------ALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
PS VTY+ +LI G C G EA + M PD +Y+ +I
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Query: 342 SRFCKIGEPGMAYELMVEM 360
C+ G+ AY L EM
Sbjct: 648 HGHCRAGDIRKAYTLYKEM 666
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 175/353 (49%), Gaps = 13/353 (3%)
Query: 18 LRVKTILRNRLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVG----RIREVAE 73
L VK+ R L+ + I A A P + + + R+++++ +E+ E
Sbjct: 139 LVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE 198
Query: 74 KTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEV 133
+ ++N I+ C G + M KG + TY +LI +C ++
Sbjct: 199 SQVSPNVFTYNIL--IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 134 DKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI 193
D +K+L M +G P++ +YN ++ C E R++E + +L M RG S D YNT+
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 194 ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
I G +E AL A+M+ G+ P TY+ LI S+C ++ A + +M G
Sbjct: 317 IK-GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 254 LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMG 313
L E YT+L++ F +G ++ + + + FSPS+VTYNALI GHC G
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMND------NGFSPSVVTYNALINGHCVTG 429
Query: 314 RFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ E+A+ +L M E GLSPD VSYSTV+S FC+ + A + EM EK I+
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 151/304 (49%), Gaps = 16/304 (5%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+R +A K + L+S+N I LC +GRM MNR+G +LD+ TY +LI +
Sbjct: 263 LRSMALKGLEPNLISYNVV--INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C + +A + +EM+ G +PSV TY L+ + C+ + A L M RGL P+
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y T++ G Q+ ++ A +M + G P TY+ LI C ++ +A +
Sbjct: 381 RTYTTLVD-GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNAL 305
+M GLS +Y+++++ FC + + + + KG PD +TY++L
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD--------TITYSSL 491
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
I G C R +EA + M +GL PD +Y+ +I+ +C G+ A +L EM EK
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK-- 549
Query: 366 RGVL 369
GVL
Sbjct: 550 -GVL 552
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 32/330 (9%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+RE+ + +V++NA I C G+M M KGL+ D +Y++++ F
Sbjct: 403 LREMNDNGFSPSVVTYNAL--INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C +VD+A +V EM+++G P TY+ L++ +CE+ R +EA + M GL PD
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y +I E +L+ AL+ +MVEKG+LP TYS LI L + R EA L
Sbjct: 521 FTYTALIN-AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 248 EMLRGGLSTGEPAY---------------TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
++ + Y SL+ FC++G ++ + +++ G
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG------ 633
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
P YN +I+GHC G +A + + M + G V+ ++ K G+
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Query: 353 AYELMV------EMNEKEIRGVLMKSCINH 376
++V E++E E VL++ INH
Sbjct: 694 LNSVIVHVLRSCELSEAEQAKVLVE--INH 721
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 1/140 (0%)
Query: 84 NATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEM 143
+ + I+ C KG M M K D Y +IH C ++ KAY + EM
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 144 IDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELE 203
+ GF T LV+A +E +V E ++ V R ++ +E
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNELNSVI-VHVLRSCELSEAEQAKVLVEINHREGN 725
Query: 204 LDTALEFKAKMVEKGILPHA 223
+D L+ A+M + G LP+
Sbjct: 726 MDVVLDVLAEMAKDGFLPNG 745
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 141/288 (48%), Gaps = 11/288 (3%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V++N ++ LC G++ M ++ D TYT LI C V A K+
Sbjct: 204 VVTYNTI--LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
L EM DRG +P V TYN LV C+E R+ EA L M G P+V +N I+
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+D A + A M+ KG P T++ LI LC + L A D+ +M + G
Sbjct: 322 TGRWMD-AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS-PSLVTYNALIYGHCCMGRFEEA 318
+Y L++ FC E + + +L V+R P +VTYN ++ C G+ E+A
Sbjct: 381 SYNPLLHGFCKEKKMDRAIE-------YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ IL ++ G SP ++Y+TVI K G+ G A +L+ EM K+++
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 141/291 (48%), Gaps = 9/291 (3%)
Query: 70 EVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCH 129
E+ ++ +V++N + +C +GR+ M G + T+ ++ C
Sbjct: 264 EMRDRGCTPDVVTYNVL--VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
A K+L++M+ +GFSPSV T+N L+ C + + A IL M G P+
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
YN ++ G +E ++D A+E+ +MV +G P TY+ ++ +LC + ++ +A ++ ++
Sbjct: 382 YNPLL-HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
G S Y ++++ G+ K L D ++ P +TY++L+ G
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA------KDLKPDTITYSSLVGGL 494
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
G+ +EA+ MG+ P+AV++++++ CK + A + +V M
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 128/276 (46%), Gaps = 12/276 (4%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I+ C G+ + G D TY +I +C E++ A VL M
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-- 198
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
SP V TYN ++R+ C+ ++++A +L M R PDV Y TI+ ++ +
Sbjct: 199 -SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY-TILIEATCRDSGVG 256
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A++ +M ++G P TY+ L+ +C E RL EA +M G + ++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRG 324
+ C G + DA K L D + + FSPS+VT+N LI C G A+ IL
Sbjct: 317 RSMCSTGRW------MDAEK-LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
M + G P+++SY+ ++ FCK + A E + M
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 11/252 (4%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V+FN I LC KG + M + G + +Y L+H FC ++++D+A +
Sbjct: 344 VVTFNIL--INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
L M+ RG P + TYN ++ A C++ +V +A IL ++ +G SP + YNT+I G
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID-GLA 460
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+ + A++ +M K + P TYS L+ L E ++ EA F E R G+
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEA 318
+ S+M C + + FL + R P+ +Y LI G G +EA
Sbjct: 521 TFNSIMLGLCKSRQTDRAID-------FLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 319 LGILRGMAEMGL 330
L +L + GL
Sbjct: 574 LELLNELCNKGL 585
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 14/234 (5%)
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
E+++ +K L M+ G P + L+R +C + R+AA IL ++ G PDV YN
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
+I+ G + E++ AL +M + P TY+ ++ SLC +L +A ++ ML+
Sbjct: 177 VMIS-GYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGH 309
YT L+ A C + L D + +G PD +VTYN L+ G
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD--------VVTYNVLVNGI 284
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
C GR +EA+ L M G P+ ++++ ++ C G A +L+ +M K
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 151/305 (49%), Gaps = 21/305 (6%)
Query: 66 GRIRE----VAEKTNQKGLV--SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
GR+ + + E +NQ G + + LC G + M ++G D T
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y S+I C EV +A +VL +MI R SP+ TYN L+ C+E++V EA + RV+
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 180 DRGLSPDVDIYNTIITWGGDQELELD----TALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+G+ PDV +N++I Q L L A+E +M KG P TY+ LI SLC
Sbjct: 393 SKGILPDVCTFNSLI-----QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
+ +L EA ++ ++M G + Y +L++ FC + + + D ++ V
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME------VHGV 501
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
S + VTYN LI G C R E+A ++ M G PD +Y+++++ FC+ G+ A +
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 356 LMVEM 360
++ M
Sbjct: 562 IVQAM 566
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 134/286 (46%), Gaps = 15/286 (5%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T +Q +G + M G + + ++H FC + V+ A + EM +
Sbjct: 228 TTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN 287
Query: 146 R-GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
+ GF P T+N LV C+ V+ A I+ VM G PDV YN++I+ G + E+
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS-GLCKLGEV 346
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
A+E +M+ + P+ TY+ LI +LC E ++ EA +L R + G+ + SL
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 265 MNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+ CL L + + KG PD TYN LI C G+ +EAL +L
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPD--------EFTYNMLIDSLCSKGKLDEALNML 458
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGV 368
+ M G + ++Y+T+I FCK + A E+ EM E+ GV
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM---EVHGV 501
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 15/265 (5%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
GL D Y ++++ + ++M G P V+T+N L++A C ++R A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+L M GL PD + T++ G +E +LD AL + +MVE G + + ++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVM-QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 232 SLCFERRLSEAFDLFREML-RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFL 288
C E R+ +A + +EM + G + + +L+N C G + D + +G+
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
PD + TYN++I G C +G +EA+ +L M SP+ V+Y+T+IS CK
Sbjct: 328 PD--------VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 349 EPGMAYELMVEMNEKEIRGVLMKSC 373
+ A EL + K G+L C
Sbjct: 380 QVEEATELARVLTSK---GILPDVC 401
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 113/243 (46%), Gaps = 9/243 (3%)
Query: 58 KARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQ 117
K + ++ + ++++ + ++++N I C + M G++ +
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTL--IDGFCKANKTREAEEIFDEMEVHGVSRNS 505
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
TY +LI C V+ A +++ +MI G P TYN L+ +C +++AA I++
Sbjct: 506 VTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQA 565
Query: 178 MADRGLSPDVDIYNTIIT-WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
M G PD+ Y T+I+ +E+ + L +M + PHA Y+ +I L +
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRK 623
Query: 237 RRLSEAFDLFREMLRGGLSTGEP-AYTSLMNAFCLEG---EFSKVFHLHDAIKGFLPDFV 292
R+ +EA +LFREML + + +Y + C G + F + KGF+P+F
Sbjct: 624 RKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFS 683
Query: 293 TRF 295
+ +
Sbjct: 684 SLY 686
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 153/324 (47%), Gaps = 32/324 (9%)
Query: 21 KTILRNRLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGL 80
K L+ ++ +I G+ GNL E ++ K+RT DV
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLD-EGFRLKHQME-KSRTRPDV--------------- 310
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
F +A I LC + +M M ++GL + +T+LIH E+D +
Sbjct: 311 --FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW---G 197
+M+ +G P + YN LV +C+ + A I+ M RGL PD Y T+I G
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 198 GDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTG 257
GD E TALE + +M + GI +S L+ +C E R+ +A REMLR G+
Sbjct: 429 GDVE----TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 258 EPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEE 317
+ YT +M+AFC +G+ F L ++ PS+VTYN L+ G C +G+ +
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQS------DGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 318 ALGILRGMAEMGLSPDAVSYSTVI 341
A +L M +G+ PD ++Y+T++
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLL 562
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 7/269 (2%)
Query: 92 LCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS 151
C +G + + ++ L ++ +LI+ +C +D+ +++ +M P
Sbjct: 250 FCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPD 309
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
V TY+ L+ A C+E+++ A G+ M RGL P+ I+ T+I G + E+D E
Sbjct: 310 VFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLI-HGHSRNGEIDLMKESY 368
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
KM+ KG+ P Y+ L+ C L A ++ M+R GL + YT+L++ FC
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 272 GEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLS 331
G+ + + V ++AL+ G C GR +A LR M G+
Sbjct: 429 GDVETALEIRKEMDQ------NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 332 PDAVSYSTVISRFCKIGEPGMAYELMVEM 360
PD V+Y+ ++ FCK G+ ++L+ EM
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 9/225 (4%)
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
E++D GF +V +N L+ +C+E + +A + + R L P V +NT+I G +
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN-GYCKV 288
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
LD K +M + P TYS LI +LC E ++ A LF EM + GL + +
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALG 320
T+L++ GE D +K +++ P +V YN L+ G C G A
Sbjct: 349 TTLIHGHSRNGEI-------DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
I+ GM GL PD ++Y+T+I FC+ G+ A E+ EM++ I
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 9/280 (3%)
Query: 70 EVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCH 129
E+ +++ Q +VSFN I C G + M + D TY++LI+ C
Sbjct: 265 EITKRSLQPTVVSFNTL--INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCK 322
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+ ++D A+ + EM RG P+ + L+ + + + M +GL PD+ +
Sbjct: 323 ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL 382
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
YNT++ G + +L A M+ +G+ P TY+ LI C + A ++ +EM
Sbjct: 383 YNTLVN-GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
+ G+ +++L+ C EG +V A++ L P VTY ++
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEG---RVIDAERALREMLR---AGIKPDDVTYTMMMDAF 495
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
C G + +L+ M G P V+Y+ +++ CK+G+
Sbjct: 496 CKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 64 DVGRIREVAEKTNQKGL----VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
++ ++E +K KGL V +N + C G + M R+GL D+ T
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTL--VNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
YT+LI FC +V+ A ++ EM G ++ LV C+E RV +A LR M
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G+ PD D+ T++ ++ + T + +M G +P TY+ L+ LC ++
Sbjct: 478 RAGIKPD-DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF 278
A L ML G+ + Y +L+ SK +
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY 575
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 147/319 (46%), Gaps = 35/319 (10%)
Query: 77 QKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
+ + +FN + LC +G++ M G+ TY +L+ F + ++ A
Sbjct: 222 KSNVYTFNIMINV--LCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW 196
++SEM +GF P + TYN ++ C E R E +LR M + GL PD YN +I
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIR- 335
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
G +L+ A ++ +MV++G++P TY+ LI L E ++ A L RE+ G+
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 395
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFS------------------ 296
Y L+N +C G+ K F LHD + G P T S
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 297 ---------PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P LV N L+ GHC +G + A +L+ M M ++PD V+Y+ ++ C
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 348 GEPGMAYELMVEMNEKEIR 366
G+ A ELM EM + I+
Sbjct: 516 GKFEEARELMGEMKRRGIK 534
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 115/231 (49%), Gaps = 7/231 (3%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
KG+ LD TY LI+ +C + KA+ + EM+ G P+ TY L+ C +++ RE
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A + + +G+ PD+ + NT++ G +D A +M I P TY+ L+
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMD-GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
LC E + EA +L EM R G+ +Y +L++ + +G+ F + D +
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSL--- 566
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
F+P+L+TYNAL+ G E A +LR M G+ P+ S+ +VI
Sbjct: 567 ---GFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 14/255 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M KG T ++ + ++ A+ ++M +V T+N ++ C+E +
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+++A G L +M G+ P + YNT++ G ++ A ++M KG P TY+
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLV-QGFSLRGRIEGARLIISEMKSKGFQPDMQTYN 299
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--K 285
++ +C E R SE + REM GL +Y L+ G+ F D + +
Sbjct: 300 PILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQ 356
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
G +P F TYN LI+G + E A ++R + E G+ D+V+Y+ +I+ +C
Sbjct: 357 GMVPTF--------YTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 346 KIGEPGMAYELMVEM 360
+ G+ A+ L EM
Sbjct: 409 QHGDAKKAFALHDEM 423
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 14/218 (6%)
Query: 145 DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
DR + S ++ LVR C+ V EA +M ++G P + N I+T +
Sbjct: 148 DRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLN-RI 206
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
+ A F A M I + T++ +I LC E +L +A M G+ Y +L
Sbjct: 207 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTL 266
Query: 265 MNAFCLEG--EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+ F L G E +++ KGF PD + TYN ++ C GR E +L
Sbjct: 267 VQGFSLRGRIEGARLIISEMKSKGFQPD--------MQTYNPILSWMCNEGRASE---VL 315
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
R M E+GL PD+VSY+ +I G+ MA+ EM
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM 353
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F T+ I LC K + + KG+ D +L+ C +D+A+ +L E
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M +P TYN L+R C E + EA ++ M RG+ PD YNT+I+ G ++
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS-GYSKKG 551
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+ A + +M+ G P TY+ L+ L + A +L REM G+ + ++
Sbjct: 552 DTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFC 611
Query: 263 SLMNA 267
S++ A
Sbjct: 612 SVIEA 616
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 204 LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTS 263
+D A+E M EKG P +T + ++ L R+ A+ + +M R + + +
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 264 LMNAFCLEGEFSKVFHLHDAIKGFLPDF-VTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
++N C EG+ K KGFL V P++VTYN L+ G GR E A I+
Sbjct: 231 MINVLCKEGKLKKA-------KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLII 283
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI------RGVLMKSCINH 376
M G PD +Y+ ++S C G A E++ EM E + +L++ C N+
Sbjct: 284 SEMKSKGFQPDMQTYNPILSWMCN---EGRASEVLREMKEIGLVPDSVSYNILIRGCSNN 340
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 154/325 (47%), Gaps = 12/325 (3%)
Query: 45 QPESNKVSGLWN---LKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXX 101
+P+ + L N + R V + ++ E + +V++NA I LC R+
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI--IDSLCKTKRVNDA 209
Query: 102 XXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRA 161
+ RKG+ + TYT+L++ C+ A ++LS+MI + +P+V TY+ L+ A
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 162 YCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILP 221
+ + +V EA + M + PD+ Y+++I G +D A + MV KG L
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN-GLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 222 HADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLH 281
+Y+ LI C +R+ + LFREM + GL + Y +L+ F G+ K
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 282 DAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
+ F SP + TYN L+ G C G E+AL I M + + D V+Y+TVI
Sbjct: 389 SQMDFF------GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 342 SRFCKIGEPGMAYELMVEMNEKEIR 366
CK G+ A+ L ++ K ++
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLK 467
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 129/256 (50%), Gaps = 11/256 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M + G D+ T SL++ FC + V A ++ +M++ G+ P + YN ++ + C+ R
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V +A + + +G+ P+V Y ++ + D A + M++K I P+ TYS
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA-RLLSDMIKKKITPNVITYS 264
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--K 285
L+ + ++ EA +LF EM+R + Y+SL+N CL + + D + K
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
G L D +V+YN LI G C R E+ + + R M++ GL + V+Y+T+I F
Sbjct: 325 GCLAD--------VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 346 KIGEPGMAYELMVEMN 361
+ G+ A E +M+
Sbjct: 377 QAGDVDKAQEFFSQMD 392
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 126/252 (50%), Gaps = 7/252 (2%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ D T+ +I+ FC +V A +L +M+ G+ P T LV +C +RV +A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
++ M + G PD+ YN II + ++ A +F ++ KGI P+ TY+ L+
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTK-RVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
LC R S+A L +M++ ++ Y++L++AF G+ + L + + D
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID- 292
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
P +VTY++LI G C R +EA + M G D VSY+T+I+ FCK
Sbjct: 293 -----PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 352 MAYELMVEMNEK 363
+L EM+++
Sbjct: 348 DGMKLFREMSQR 359
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
++++L+ A++ + MV+ P ++ L+ ++ ++ L ++M G+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
+ ++N FC F + A+ + P VT +L+ G C R +A+
Sbjct: 122 TFNIVINCFCC------CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
++ M E+G PD V+Y+ +I CK A++ E+ K IR
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR 222
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 60 RTEKDVGRIREVAEKTNQKGLVSFNAT--ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQ 117
R E + RE++ Q+GLVS T IQ G + M+ G++ D
Sbjct: 345 RVEDGMKLFREMS----QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
TY L+ C E++KA + +M R + TY ++R C+ +V EA +
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 178 MADRGLSPDVDIYNTII----TWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
++ +GL PD+ Y T++ T G E+E KM ++G++ + T S
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVE-----ALYTKMKQEGLMKNDCTLS 509
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 146/309 (47%), Gaps = 41/309 (13%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I+ LCG R M G+ + TYT LI C Q + +KA ++L +M++
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 146 RGFSPSVATYNKLVRAYCE----------------------------------EDRVREA 171
+G P+V TYN L+ YC+ + V +A
Sbjct: 387 KGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKA 446
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
G+L M +R + PDV YN++I G + D+A + M ++G++P TY+ +I
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLID-GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
SLC +R+ EA DLF + + G++ YT+L++ +C G KV H ++ L
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG---KVDEAHLMLEKMLSKN 562
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
P+ +T+NALI+G C G+ +EA + M ++GL P + + +I R K G+
Sbjct: 563 CL---PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 352 MAYELMVEM 360
AY +M
Sbjct: 620 HAYSRFQQM 628
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 163/341 (47%), Gaps = 45/341 (13%)
Query: 60 RTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
R + + ++E+ E + + ++ T I LC + + M KGL + T
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTY--TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y +LI+ +C + ++ A V+ M R SP+ TYN+L++ YC+ + V +A G+L M
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
+R + PDV YN++I G + D+A + M ++G++P TY+ +I SLC +R+
Sbjct: 455 ERKVLPDVVTYNSLID-GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
EA DLF + + G++ YT+L++ +C G KV H ++ L P+
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG---KVDEAHLMLEKMLSKNCL---PNS 567
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSP--------------------------- 332
+T+NALI+G C G+ +EA + M ++GL P
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 333 --------DAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
DA +Y+T I +C+ G A ++M +M E +
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 12/283 (4%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
+ + C G + + GL D TYTSLI +C ++++D A+KV +E
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT--WGGDQ 200
M +G + Y L+ C R+ EA + M D P V Y +I G ++
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
+ E AL +M E GI P+ TY+ LI SLC + + +A +L +ML GL
Sbjct: 339 KSE---ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
Y +L+N +C G + + ++ + SP+ TYN LI G+ C +A+G
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMES------RKLSPNTRTYNELIKGY-CKSNVHKAMG 448
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
+L M E + PD V+Y+++I C+ G AY L+ MN++
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 10/284 (3%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F T+ I C + + M KG ++ YT LIH C +D+A + +
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVK 313
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M D P+V TY L+++ C +R EA +++ M + G+ P++ Y +I Q
Sbjct: 314 MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQ-C 372
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+ + A E +M+EKG++P+ TY+ LI C + +A D+ M LS Y
Sbjct: 373 KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYN 432
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGI 321
L+ +C ++H A+ G L + R P +VTYN+LI G C G F+ A +
Sbjct: 433 ELIKGYCKS-------NVHKAM-GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 322 LRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
L M + GL PD +Y+++I CK A +L + +K +
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 141/309 (45%), Gaps = 27/309 (8%)
Query: 76 NQKGLV--SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEV 133
N +GLV + T+ I LC R+ + +KG+ + YT+LI +C +V
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 134 DKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI 193
D+A+ +L +M+ + P+ T+N L+ C + +++EA + M GL P V +TI
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST-DTI 607
Query: 194 ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
+ ++ + D A +M+ G P A TY+ I + C E RL +A D+ +M G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 254 LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALI------- 306
+S Y+SL+ + G+ + D +K T PS T+ +LI
Sbjct: 668 VSPDLFTYSSLIKGY---GDLGQTNFAFDVLKRMRD---TGCEPSQHTFLSLIKHLLEMK 721
Query: 307 YGH--------CCMGR---FEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
YG C M F+ + +L M E ++P+A SY +I C++G +A +
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK 781
Query: 356 LMVEMNEKE 364
+ M E
Sbjct: 782 VFDHMQRNE 790
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 122/328 (37%), Gaps = 59/328 (17%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
S A I LC G++ M + GL T T LIH + D AY
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD-- 199
+M+ G P TY ++ YC E R+ +A ++ M + G+SPD+ Y+++I GD
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 200 -----------------------------------------QELEL---------DTALE 209
E EL DT +E
Sbjct: 687 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVE 746
Query: 210 FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG-GLSTGEPAYTSLMNAF 268
KMVE + P+A +Y LI+ +C L A +F M R G+S E + +L++
Sbjct: 747 LLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
C K+ ++A K P L + LI G G E + + + +
Sbjct: 807 C------KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC 860
Query: 329 GLSPDAVSYSTVISRFCKIGEPGMAYEL 356
G D +++ +I K G YEL
Sbjct: 861 GYYEDELAWKIIIDGVGKQGLVEAFYEL 888
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 87/247 (35%), Gaps = 77/247 (31%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y +L++ VD+ +V EM++ P++ TYNK+V YC+ V EA
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEAN------- 238
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
++ +K+VE G+ P TY+ LI+ C + L
Sbjct: 239 -----------------------------QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDL 269
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
AF +F EM G E AYT
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTH------------------------------------ 293
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
LI+G C R +EA+ + M + P +Y+ +I C A L+ E
Sbjct: 294 -----LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 360 MNEKEIR 366
M E I+
Sbjct: 349 MEETGIK 355
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
++ LC + E F+L +++ G Y +L+N+ F V + L
Sbjct: 162 VLDLCRKMNKDERFELKYKLIIG-------CYNTLLNSL---ARFGLVDEMKQVYMEMLE 211
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
D + P++ TYN ++ G+C +G EEA + + E GL PD +Y+++I +C+ +
Sbjct: 212 D---KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 350 PGMAYELMVEMNEKEIR 366
A+++ EM K R
Sbjct: 269 LDSAFKVFNEMPLKGCR 285
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 129/239 (53%), Gaps = 7/239 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G++ D ++T LIH FC + A VL +M+ G+ PS+ T+ L+ +C +R
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +A ++ +M G P+V +YNT+I G + EL+ ALE +M +KG+ TY+
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLID-GLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L+ LC+ R S+A + R+M++ ++ +T+L++ F +G + L+ +
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM--- 272
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ P+ VTYN++I G C GR +A MA G P+ V+Y+T+IS FCK
Sbjct: 273 ---IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 7/292 (2%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
++ T I C R+ M + G T+ SL+H FC + A+ ++
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M+ G+ P+V YN L+ C+ + A +L M +GL DV YNT++T G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT-GLCYSG 225
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
A M+++ I P T++ LI + L EA +L++EM++ + Y
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
S++N C+ G L+DA K F P++VTYN LI G C +E + +
Sbjct: 286 SIINGLCMHGR------LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLMKSCI 374
+ M+ G + D +Y+T+I +C++G+ +A ++ M + + ++ CI
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 13/300 (4%)
Query: 70 EVAEKTNQKGL----VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIH 125
E+ + +KGL V++N T LC GR M ++ + D T+T+LI
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLT--GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 126 MFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSP 185
+F Q +D+A ++ EMI P+ TYN ++ C R+ +A +MA +G P
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 186 DVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDL 245
+V YNT+I+ G + +D ++ +M +G TY+ LI C +L A D+
Sbjct: 315 NVVTYNTLIS-GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 246 FREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNAL 305
F M+ ++ + L++ C+ GE D ++ + +V YN +
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE------SEKYIGIVAYNIM 427
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
I+G C + E+A + + G+ PDA +Y+ +I CK G A EL+ M E+ I
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 13/255 (5%)
Query: 127 FCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD 186
F H + A+ + EM+ PS+ + +L+ A R + M G+S D
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 187 VDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLF 246
+ + TI+ + L AL KM++ G P T+ L+ C R+ +AF L
Sbjct: 106 LYSF-TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 247 REMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNA 304
M++ G Y +L++ C GE + L + + KG D +VTYN
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD--------VVTYNT 216
Query: 305 LIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKE 364
L+ G C GR+ +A +LR M + ++PD V+++ +I F K G A EL EM +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 365 I--RGVLMKSCINHL 377
+ V S IN L
Sbjct: 277 VDPNNVTYNSIINGL 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 11/211 (5%)
Query: 157 KLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVE 216
KL + R +A + M P + + ++T + +T + F KM
Sbjct: 41 KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLR-RYETVIYFSQKMEL 99
Query: 217 KGILPHADTYSWLIVSLCFER--RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEF 274
GI D YS+ I+ CF R RLS A + +M++ G + SL++ FCL
Sbjct: 100 YGI--SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL---- 153
Query: 275 SKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDA 334
V + DA + + + P++V YN LI G C G AL +L M + GL D
Sbjct: 154 --VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211
Query: 335 VSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
V+Y+T+++ C G A ++ +M ++ I
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSI 242
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 9/293 (3%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+ ++ EK LV+FNA I +G+ M ++ + D TY SLI+ F
Sbjct: 243 LSDMIEKKINPNLVTFNAL--IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C + +DKA ++ M+ + P + TYN L++ +C+ RV + + R M+ RGL D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y T+I G + + D A + +MV G+ P TYS L+ LC +L +A ++F
Sbjct: 361 VTYTTLI-QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIY 307
M + + YT+++ C G+ + L F + P++VTYN +I
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL------FCSLSLKGVKPNVVTYNTMIS 473
Query: 308 GHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
G C +EA +L+ M E G PD+ +Y+T+I + G+ + EL+ EM
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 9/290 (3%)
Query: 77 QKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
+ +V FN I LC + M KG+ + TY+SLI C A
Sbjct: 182 EADVVIFNTI--IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW 196
++LS+MI++ +P++ T+N L+ A+ +E + EA + M R + PD+ YN++I
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN- 298
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
G LD A + MV K P DTY+ LI C +R+ + +LFREM GL
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE 316
YT+L+ +G+ K + D V P ++TY+ L+ G C G+ E
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNA---QKVFKQMVSDGV---PPDIMTYSILLDGLCNNGKLE 412
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+AL + M + + D Y+T+I CK G+ ++L ++ K ++
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 129/283 (45%), Gaps = 9/283 (3%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
++ + C R+ M G D T+T+LIH + +A ++ M+
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
RG P++ TY +V C+ + A +L M + DV I+NTII +D
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR-HVD 202
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
AL +M KGI P+ TYS LI LC R S+A L +M+ ++ + +L+
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRG 324
+AF EG+F + LHD D + R P + TYN+LI G C R ++A +
Sbjct: 263 DAFVKEGKFVEAEKLHD-------DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
M PD +Y+T+I FCK EL EM+ + + G
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 130/258 (50%), Gaps = 7/258 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M R G++ + TY LI+ FC + ++ A +L +M+ G+ PS+ T + L+ YC R
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +A ++ M + G PD + T+I G + A+ +MV++G P+ TY
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLI-HGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ LC + AF+L +M + + +++++ C K H+ DA+ F
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC------KYRHVDDALNLF 208
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P++VTY++LI C GR+ +A +L M E ++P+ V+++ +I F K
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 348 GEPGMAYELMVEMNEKEI 365
G+ A +L +M ++ I
Sbjct: 269 GKFVEAEKLHDDMIKRSI 286
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 7/246 (2%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
+ L+ ++ D + +M G S ++ TYN L+ +C ++ A +L M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G P + ++++ G + A+ +MVE G P T++ LI L +
Sbjct: 73 KLGYEPSIVTLSSLLN-GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
SEA L M++ G Y ++N C G+ F+L + ++ + +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA------AKIEADV 185
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
V +N +I C ++AL + + M G+ P+ V+YS++IS C G A +L+ +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 360 MNEKEI 365
M EK+I
Sbjct: 246 MIEKKI 251
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 9/218 (4%)
Query: 150 PSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALE 209
PS+ +NKL+ A + + + M G+S ++ YN +I + ++ AL
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS-QISLALA 66
Query: 210 FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC 269
KM++ G P T S L+ C +R+S+A L +M+ G +T+L++
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 270 LEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
L + S+ L D + V R P+LVTY ++ G C G + A +L M
Sbjct: 127 LHNKASEAVALVDRM-------VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 329 GLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ D V ++T+I CK A L EM K IR
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+ D + KM GI + TY+ LI C ++S A L +M++ G +
Sbjct: 25 KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 84
Query: 263 SLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
SL+N +C S L D + G+ PD +T+ LI+G + EA+
Sbjct: 85 SLLNGYCHGKRISDAVALVDQMVEMGYRPD--------TITFTTLIHGLFLHNKASEAVA 136
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG--VLMKSCINHL 377
++ M + G P+ V+Y V++ CK G+ +A+ L+ +M +I V+ + I+ L
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 214 MVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
MV+ LP ++ L+ ++ ++ L +M R G+S Y L+N FC +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 274 FSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPD 333
S L + + PS+VT ++L+ G+C R +A+ ++ M EMG PD
Sbjct: 61 ISLALALLGKMMKL------GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 114
Query: 334 AVSYSTVI 341
++++T+I
Sbjct: 115 TITFTTLI 122
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 134/258 (51%), Gaps = 7/258 (2%)
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
N+ + LD ++ LI C E++K++ +L E+ + GFSP+V Y L+ C++ +
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 169 REAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
+A + M GL + Y T++ G + E KM E G+ P+ TY+
Sbjct: 215 EKAKDLFFEMGKLGLVANERTY-TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFL 288
++ LC + R +AF +F EM G+S Y +L+ C E + ++ + D +K
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS-- 331
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+P+L+TYN LI G C +G+ +AL + R + GLSP V+Y+ ++S FC+ G
Sbjct: 332 ----DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 349 EPGMAYELMVEMNEKEIR 366
+ A +++ EM E+ I+
Sbjct: 388 DTSGAAKMVKEMEERGIK 405
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 147/309 (47%), Gaps = 30/309 (9%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I C KG + M + GL ++RTYT LI+ + +++ +M +
Sbjct: 202 TTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQE 261
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G P++ TYN ++ C++ R ++A + M +RG+S ++ YNT+I G +E++L+
Sbjct: 262 DGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI-GGLCREMKLN 320
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A + +M GI P+ TY+ LI C +L +A L R++ GLS Y L+
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 266 NAFCLEGEFSKVFHLHDAI--KGFLPDFVT--------------------RFS------- 296
+ FC +G+ S + + +G P VT R S
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P + TY+ LI+G C G+ EA + + M E P+ V Y+T+I +CK G A +L
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Query: 357 MVEMNEKEI 365
+ EM EKE+
Sbjct: 501 LKEMEEKEL 509
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 137/279 (49%), Gaps = 9/279 (3%)
Query: 70 EVAEKTNQKGLVS--FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
E+ EK + G+ + + LC GR M +G++ + TY +LI
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C + ++++A KV+ +M G +P++ TYN L+ +C ++ +A + R + RGLSP +
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
YN +++ G ++ + A + +M E+GI P TY+ LI + + +A L
Sbjct: 374 VTYNILVS-GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIY 307
M GL Y+ L++ FC++G+ +++A + F P+ V YN +I
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQ------MNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Query: 308 GHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
G+C G AL +L+ M E L+P+ SY +I CK
Sbjct: 487 GYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ I C KG+M M K ++ Y ++I +C + +A K+L EM +
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
+ +P+VA+Y ++ C+E + +EA ++ M D G+ P I + I D +
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHV 563
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 9/293 (3%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+ ++ EK LV+FNA I +G+ M ++ + D TY SL++ F
Sbjct: 318 LSDMIEKKINPNLVTFNAL--IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C + +DKA ++ M+ + P V TYN L++ +C+ RV + + R M+ RGL D
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y T+I G + + D A + +MV G+ P TYS L+ LC +L +A ++F
Sbjct: 436 VTYTTLIQ-GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIY 307
M + + YT+++ C G+ + L F + P++VTYN +I
Sbjct: 495 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL------FCSLSLKGVKPNVVTYNTMIS 548
Query: 308 GHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
G C +EA +L+ M E G P++ +Y+T+I + G+ + EL+ EM
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 129/283 (45%), Gaps = 9/283 (3%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
++ + C R+ M G D T+T+LIH + +A ++ M+
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
RG P++ TY +V C+ A +L M + DV I+NTII +D
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYR-HVD 277
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
AL +M KGI P+ TYS LI LC R S+A L +M+ ++ + +L+
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRG 324
+AF EG+F + L+D D + R P + TYN+L+ G C R ++A +
Sbjct: 338 DAFVKEGKFVEAEKLYD-------DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
M PD V+Y+T+I FCK EL EM+ + + G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 135/287 (47%), Gaps = 9/287 (3%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V FN I LC + M KG+ + TY+SLI C A ++
Sbjct: 260 VVIFNTI--IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
LS+MI++ +P++ T+N L+ A+ +E + EA + M R + PD+ YN+++ G
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN-GFC 376
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
LD A + MV K P TY+ LI C +R+ + +LFREM GL
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
YT+L+ +G+ K + D V P ++TY+ L+ G C G+ E+AL
Sbjct: 437 TYTTLIQGLFHDGDCDNA---QKVFKQMVSDGV---PPDIMTYSILLDGLCNNGKLEKAL 490
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ M + + D Y+T+I CK G+ ++L ++ K ++
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 9/294 (3%)
Query: 69 REVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFC 128
+E+ K + +V++ ++ I LC GR M K + + T+ +LI F
Sbjct: 284 KEMETKGIRPNVVTY--SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 129 HQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVD 188
+ + +A K+ +MI R P + TYN LV +C DR+ +A + M + PDV
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 189 IYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFRE 248
YNT+I G + ++ E +M +G++ TY+ LI L + A +F++
Sbjct: 402 TYNTLIK-GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 249 MLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYG 308
M+ G+ Y+ L++ C G+ K + D ++ + + Y +I G
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK------SEIKLDIYIYTTMIEG 514
Query: 309 HCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
C G+ ++ + ++ G+ P+ V+Y+T+IS C AY L+ +M E
Sbjct: 515 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 9/248 (3%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y ++ H ++D A + M+ PS+ +NKL+ A + + + M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
+ + YN +I + ++ AL KM++ G P T S L+ C +R+
Sbjct: 113 RLEIVHGLYTYNILINCFCRRS-QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPS 298
S+A L +M+ G +T+L++ L + S+ L D + V R P+
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-------VQRGCQPN 224
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
LVTY ++ G C G + AL +L M + D V ++T+I CK A L
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 284
Query: 359 EMNEKEIR 366
EM K IR
Sbjct: 285 EMETKGIR 292
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 30/306 (9%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ I LC + M+ KG+ D TY+SLI C+ A ++LS+M++
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
R +P+V T+N L+ A+ +E ++ EA + M R + P++ YN++I G LD
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN-GFCMHDRLD 362
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A + MV K LP TY+ LI C +++ + +LFR+M R GL YT+L+
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 266 NAF--CLEGEFSKVFHLHDAIKGFLPDFVT---------------------------RFS 296
+ F + + +++ G P+ +T +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P + TYN + G C G+ E+ + ++ G+ PD ++Y+T+IS FCK G AY L
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 357 MVEMNE 362
++M E
Sbjct: 543 FIKMKE 548
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 136/314 (43%), Gaps = 42/314 (13%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I LC + ++ M + G T SL++ FCH + +A ++ +M++ G+
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW---GGDQELEL- 204
P T+ LV + ++ EA ++ M +G PD+ Y +I G+ +L L
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 205 ------------------------------DTALEFKAKMVEKGILPHADTYSWLIVSLC 234
D AL +M KGI P TYS LI LC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
R S+A L +ML ++ + SL++AF EG+ + L D + + R
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD-------EMIQR 339
Query: 295 -FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
P++VTYN+LI G C R +EA I M PD V+Y+T+I+ FCK +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 354 YELMVEMNEKEIRG 367
EL +M+ + + G
Sbjct: 400 MELFRDMSRRGLVG 413
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 146/317 (46%), Gaps = 19/317 (5%)
Query: 53 GLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKG 112
G W+ +R + ++ E+ +V+FN+ I +G++ M ++
Sbjct: 289 GRWSDASRL------LSDMLERKINPNVVTFNSL--IDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
+ + TY SLI+ FC + +D+A ++ + M+ + P V TYN L+ +C+ +V +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
+ R M+ RGL + Y T+I G Q + D A +MV G+ P+ TY+ L+
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLI-HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPD 290
LC +L +A +F + + + Y + C G+ + L ++ KG PD
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
++ YN +I G C G EEA + M E G PD+ +Y+T+I + G+
Sbjct: 520 --------VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDK 571
Query: 351 GMAYELMVEMNEKEIRG 367
+ EL+ EM G
Sbjct: 572 AASAELIKEMRSCRFAG 588
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 127/254 (50%), Gaps = 7/254 (2%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G++ + TY +I+ C + ++ A +L +M+ G+ PS+ T N L+ +C +R+ EA
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
++ M + G PD + T++ G Q + A+ +MV KG P TY +I
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLV-HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
LC A +L +M +G + Y++++++ C K H+ DA+ F
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC------KYRHVDDALNLFTEMD 267
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
P + TY++LI C GR+ +A +L M E ++P+ V+++++I F K G+
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 352 MAYELMVEMNEKEI 365
A +L EM ++ I
Sbjct: 328 EAEKLFDEMIQRSI 341
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 112/248 (45%), Gaps = 16/248 (6%)
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
+L+H+ ++D+A + EM+ PS+ ++KL+ A + + M
Sbjct: 39 NALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEI 93
Query: 181 RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLS 240
G+S ++ YN +I + +L AL KM++ G P T + L+ C R+S
Sbjct: 94 LGVSHNLYTYNIMINCLCRRS-QLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 241 EAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD--AIKGFLPDFVTRFSPS 298
EA L +M+ G +T+L++ + S+ L + +KG PD
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD-------- 204
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
LVTY A+I G C G + AL +L M + + D V YSTVI CK A L
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFT 264
Query: 359 EMNEKEIR 366
EM+ K IR
Sbjct: 265 EMDNKGIR 272
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 152/325 (46%), Gaps = 32/325 (9%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
++++ + + G+V +N I LC + M+ KG+ + TY SLI
Sbjct: 244 LKKMEQGKIEPGVVIYNTI--IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C+ A ++LS+MI+R +P+V T++ L+ A+ +E ++ EA + M R + PD+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y+++I G LD A M+ K P+ TY+ LI C +R+ E +LFR
Sbjct: 362 FTYSSLIN-GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 248 EMLRGGLSTGEPAYTSLMNAF--CLEGEFSKVFHLHDAIKGFLPDFVT------------ 293
EM + GL YT+L++ F E + +++ G LPD +T
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 294 ---------------RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYS 338
+ P + TYN +I G C G+ E+ + ++ G+ P+ V+Y+
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 339 TVISRFCKIGEPGMAYELMVEMNEK 363
T++S FC+ G A L EM E+
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEE 565
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 53 GLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKG 112
G W+ +R D+ E+ +V+F +A I +G++ M ++
Sbjct: 305 GRWSDASRLLSDM------IERKINPNVVTF--SALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
+ D TY+SLI+ FC + +D+A + MI + P+V TYN L++ +C+ RV E
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
+ R M+ RGL + Y T+I G Q E D A +MV G+LP TYS L+
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLI-HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
LC ++ A +F + R + Y ++ C G+ + D F +
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK------VEDGWDLFCSLSL 529
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
P++VTY ++ G C G EEA + R M E G PD+ +Y+T+I + G+
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA 589
Query: 353 AYELMVEM 360
+ EL+ EM
Sbjct: 590 SAELIREM 597
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 132/258 (51%), Gaps = 7/258 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G++ + TY+ LI+ FC + ++ A VL++M+ G+ P + T N L+ +C +R
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +A ++ M + G PD +NT+I G + A+ +MV KG P TY
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLI-HGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ LC + A L ++M +G + G Y ++++A C +++DA+ F
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC------NYKNVNDALNLF 279
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P++VTYN+LI C GR+ +A +L M E ++P+ V++S +I F K
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 348 GEPGMAYELMVEMNEKEI 365
G+ A +L EM ++ I
Sbjct: 340 GKLVEAEKLYDEMIKRSI 357
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 12/281 (4%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
+ + I C + ++ M + G D T SL++ FCH + A ++ +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M++ G+ P T+N L+ +R EA ++ M +G PD+ Y ++ G +
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN-GLCKRG 235
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
++D AL KM + I P Y+ +I +LC + +++A +LF EM G+ Y
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGI 321
SL+ C G +S L L D + R +P++VT++ALI G+ EA +
Sbjct: 296 SLIRCLCNYGRWSDASRL-------LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 322 LRGMAEMGLSPDAVSYSTVISRFC---KIGEPGMAYELMVE 359
M + + PD +YS++I+ FC ++ E +ELM+
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 134/289 (46%), Gaps = 11/289 (3%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V+ N+ + C R+ M G D T+ +LIH +A +
Sbjct: 151 IVTLNSL--LNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
+ M+ +G P + TY +V C+ + A +L+ M + P V IYNTII +
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+ ++ AL +M KGI P+ TY+ LI LC R S+A L +M+ ++
Sbjct: 269 YK-NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEA 318
+++L++AF EG+ + L+D + + R P + TY++LI G C R +EA
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYD-------EMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
+ M P+ V+Y+T+I FCK EL EM+++ + G
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 15/267 (5%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
SF I L R M KG D TY +++ C + ++D A +L
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII----TWG 197
+M P V YN ++ A C V +A + M ++G+ P+V YN++I +G
Sbjct: 246 KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Query: 198 GDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTG 257
A + M+E+ I P+ T+S LI + E +L EA L+ EM++ +
Sbjct: 306 -----RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 258 EPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEE 317
Y+SL+N FC+ + H+ + + P++VTYN LI G C R +E
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELM------ISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 318 ALGILRGMAEMGLSPDAVSYSTVISRF 344
+ + R M++ GL + V+Y+T+I F
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGF 441
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 7/246 (2%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
++ L+ + D + +M + G S ++ TY+ L+ +C ++ A +L M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G PD+ N+++ G + A+ +MVE G P + T++ LI L R
Sbjct: 144 KLGYEPDIVTLNSLLN-GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
SEA L M+ G Y ++N C G+ L ++ + P +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ------GKIEPGV 256
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
V YN +I C +AL + M G+ P+ V+Y+++I C G A L+ +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 360 MNEKEI 365
M E++I
Sbjct: 317 MIERKI 322
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 11/237 (4%)
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
++D A + +M+ PS+ ++KL+ A + ++ + M + G+S ++ Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
+I + +L AL AKM++ G P T + L+ C R+S+A L +M+
Sbjct: 121 ILINCFCRRS-QLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD--AIKGFLPDFVTRFSPSLVTYNALIYGH 309
G + +L++ S+ L D +KG PD LVTY ++ G
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD--------LVTYGIVVNGL 231
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
C G + AL +L+ M + + P V Y+T+I C A L EM+ K IR
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+L+LD A+ MV+ P +S L+ ++ + L +M G+S
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 260 AYTSLMNAFCLEGEFSKVFH-LHDAIK-GFLPDFVTR----------------------- 294
Y+ L+N FC + S L +K G+ PD VT
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 295 ----FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
+ P T+N LI+G R EA+ ++ M G PD V+Y V++ CK G+
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 351 GMAYELMVEMNEKEIR-GVLMKSCI 374
+A L+ +M + +I GV++ + I
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTI 262
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 164/341 (48%), Gaps = 18/341 (5%)
Query: 42 GNLQP----ESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGR 97
G L+P + + GL K + + +E+ K + +V++ ++ I LC GR
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYK-HMDDALNLFKEMETKGIRPNVVTY--SSLISCLCNYGR 306
Query: 98 MXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNK 157
M + + D T+++LI F + ++ +A K+ EM+ R PS+ TY+
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 158 LVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK 217
L+ +C DR+ EA + M + PDV YNT+I G + ++ +E +M ++
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK-GFCKYKRVEEGMEVFREMSQR 425
Query: 218 GILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKV 277
G++ + TY+ LI L A ++F+EM+ G+ Y +L++ C G+ K
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 278 FHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSY 337
+ + ++ ++ P++ TYN +I G C G+ E+ + ++ G+ PD V+Y
Sbjct: 486 MVVFEYLQR------SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 338 STVISRFCKIGEPGMAYELMVEMNEKEIRGVLMKS-CINHL 377
+T+IS FC+ G A L EM E G L S C N L
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKED---GTLPNSGCYNTL 577
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 127/258 (49%), Gaps = 7/258 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ + TY+ LI+ FC + ++ A VL +M+ G+ P++ T + L+ YC R
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ EA ++ M G P+ +NT+I G + A+ +MV KG P TY
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLI-HGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ LC AF+L +M +G L G Y ++++ C K H+ DA+ F
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC------KYKHMDDALNLF 279
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P++VTY++LI C GR+ +A +L M E ++PD ++S +I F K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 348 GEPGMAYELMVEMNEKEI 365
G+ A +L EM ++ I
Sbjct: 340 GKLVEAEKLYDEMVKRSI 357
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 11/280 (3%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F +A I +G++ M ++ + TY+SLI+ FC + +D+A ++
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M+ + P V TYN L++ +C+ RV E + R M+ RGL + YN +I G Q
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ-GLFQAG 445
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+ D A E +MV G+ P+ TY+ L+ LC +L +A +F + R + Y
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 263 SLMNAFCLEGEFSKVFHL--HDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
++ C G+ + L + ++KG PD +V YN +I G C G EEA
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPD--------VVAYNTMISGFCRKGSKEEADA 557
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
+ + M E G P++ Y+T+I + G+ + EL+ EM
Sbjct: 558 LFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 142/321 (44%), Gaps = 44/321 (13%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
+ + I C + ++ M + G + T +SL++ +CH + + +A ++ +
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD---------------- 186
M G+ P+ T+N L+ ++ EA ++ M +G PD
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 187 -------------------VDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V IYNTII G + +D AL +M KGI P+ TYS
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIID-GLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI LC R S+A L +M+ ++ +++L++AF EG+ + L+D
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD----- 350
Query: 288 LPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ V R PS+VTY++LI G C R +EA + M PD V+Y+T+I FCK
Sbjct: 351 --EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 347 IGEPGMAYELMVEMNEKEIRG 367
E+ EM+++ + G
Sbjct: 409 YKRVEEGMEVFREMSQRGLVG 429
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 7/246 (2%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
++ L+ + D + +M + G + TY+ L+ +C ++ A +L M
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G P++ ++++ G + A+ +M G P+ T++ LI L +
Sbjct: 144 KLGYEPNIVTLSSLLN-GYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
SEA L M+ G Y ++N C G+ F+L + ++ + P +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ------GKLEPGV 256
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
+ YN +I G C ++AL + + M G+ P+ V+YS++IS C G A L+ +
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 360 MNEKEI 365
M E++I
Sbjct: 317 MIERKI 322
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 11/237 (4%)
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
++D A + EM+ PS+ ++KL+ A + ++ + M + G+ + Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
+I + +L AL KM++ G P+ T S L+ C +R+SEA L +M
Sbjct: 121 ILINCFCRRS-QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGH 309
G + +L++ L + S+ L D + KG PD LVTY ++ G
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD--------LVTYGVVVNGL 231
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
C G + A +L M + L P + Y+T+I CK A L EM K IR
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIR 288
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
Y ++ G EL+LD A+ +MV+ P +S L+ ++ + L +M
Sbjct: 48 YREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM 107
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEF----------------SKVFHLHDAIKGF------ 287
G+ Y+ L+N FC + + L + G+
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 288 -----LPD--FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
L D FVT + P+ VT+N LI+G + EA+ ++ M G PD V+Y V
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 341 ISRFCKIGEPGMAYELMVEMNEKEIR-GVLMKSCI 374
++ CK G+ +A+ L+ +M + ++ GVL+ + I
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 4/211 (1%)
Query: 70 EVAEKTNQKGLVSFNATATI--QDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
EV + +Q+GLV T I Q L G M G+ + TY +L+
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C +++KA V + P++ TYN ++ C+ +V + + ++ +G+ PDV
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
YNT+I+ + + + FK +M E G LP++ Y+ LI + + + +L +
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFK-EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF 278
EM G + G+ + L+ +G K F
Sbjct: 596 EMRSCGFA-GDASTIGLVTNMLHDGRLDKSF 625
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 132/256 (51%), Gaps = 7/256 (2%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ D +Y +I+ C A V+ +M+ G+ P V T + L+ +C+ +RV +A
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
++ M + G PDV IYNTII G + ++ A+E +M G+ A TY+ L+
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIID-GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
LC R S+A L R+M+ + +T++++ F EG+FS+ L++ + D
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD- 276
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
P + TYN+LI G C GR +EA +L M G PD V+Y+T+I+ FCK
Sbjct: 277 -----PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 352 MAYELMVEMNEKEIRG 367
+L EM ++ + G
Sbjct: 332 EGTKLFREMAQRGLVG 347
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 133/283 (46%), Gaps = 22/283 (7%)
Query: 52 SGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRK 111
SG W+ AR +D+ +R++ +++F TA I +G+ M R+
Sbjct: 222 SGRWSDAARLMRDM-VMRDIVP-----NVITF--TAVIDVFVKEGKFSEAMKLYEEMTRR 273
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
+ D TY SLI+ C VD+A ++L M+ +G P V TYN L+ +C+ RV E
Sbjct: 274 CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEG 333
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+ R MA RGL D YNTII G Q D A E ++M + P+ TYS L+
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQ-GYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLY 389
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLP 289
LC R+ +A LF M + + Y +++ C G + L ++ KG P
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSP 332
D +V+Y +I G C +++++ + R M E GL P
Sbjct: 450 D--------VVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 145/325 (44%), Gaps = 15/325 (4%)
Query: 45 QPESNKVSGLWN---LKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXX 101
+P+ VS L N R + + ++ E + +V +N I C G +
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTI--IDGSCKIGLVNDA 193
Query: 102 XXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRA 161
M R G+ D TY SL+ C A +++ +M+ R P+V T+ ++
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 162 YCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILP 221
+ +E + EA + M R + PDV YN++I G +D A + MV KG LP
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN-GLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 222 HADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLH 281
TY+ LI C +R+ E LFREM + GL Y +++ + G
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR-------P 365
Query: 282 DAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
DA + +R P++ TY+ L+YG C R E+AL + M + + D +Y+ VI
Sbjct: 366 DAAQEIFSRMDSR--PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 342 SRFCKIGEPGMAYELMVEMNEKEIR 366
CKIG A++L ++ K ++
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLK 448
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 14/267 (5%)
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
V++N+ + LC GR M + + + T+T++I +F + + +A K+
Sbjct: 210 VTYNSL--VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
EM R P V TYN L+ C RV EA +L +M +G PDV YNT+I G +
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN-GFCK 326
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM-LRGGLSTGEP 259
+D + +M ++G++ TY+ +I R A ++F M R + T
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRT--- 383
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
Y+ L+ C+ K L + ++ + + TYN +I+G C +G E+A
Sbjct: 384 -YSILLYGLCMNWRVEKALVLFENMQK------SEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCK 346
+ R ++ GL PD VSY+T+IS FC+
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCR 463
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 128/276 (46%), Gaps = 7/276 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
I LC ++ M + G+ D TY SLI C A +++S M
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
R P V T+N L+ A +E RV EA M R L PD+ Y+ +I +G LD
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI-YGLCMYSRLD 308
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A E MV KG P TYS LI C +++ LF EM + G+ YT L+
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+C G+ L+ A + F P+++TYN L++G C G+ E+AL IL M
Sbjct: 369 QGYCRAGK------LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN 361
+ G+ D V+Y+ +I CK GE A+++ +N
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 127/259 (49%), Gaps = 9/259 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ + T L++ FC ++ A L +MI G PS+ T+ L+ +C DR
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V +A + M G P+V IYNTII G + ++D AL+ +M + GI P TY+
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIID-GLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI LC R S+A + M + + + +L++A EG S+ + F
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA-------EEF 278
Query: 288 LPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ + R P +VTY+ LIYG C R +EA + M G PD V+YS +I+ +CK
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 347 IGEPGMAYELMVEMNEKEI 365
+ +L EM+++ +
Sbjct: 339 SKKVEHGMKLFCEMSQRGV 357
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 7/244 (2%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y ++I C ++VD A +L+ M G P V TYN L+ C R +A ++ M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
R + PDV +N +I +E + A EF +M+ + + P TYS LI LC RL
Sbjct: 249 KREIYPDVFTFNALID-ACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRL 307
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
EA ++F M+ G Y+ L+N +C + KV H +K F +
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYC---KSKKVEH---GMKLFCEMSQRGVVRNT 361
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
VTY LI G+C G+ A I R M G+ P+ ++Y+ ++ C G+ A ++ +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 360 MNEK 363
M +
Sbjct: 422 MQKN 425
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 145/329 (44%), Gaps = 26/329 (7%)
Query: 47 ESNKVSGLWNLKARTEKD-VGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXX 105
+S +V +L R EKD +G +V++N+ I LC GR
Sbjct: 198 KSKQVDNALDLLNRMEKDGIG-----------PDVVTYNSL--ISGLCSSGRWSDATRMV 244
Query: 106 XXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEE 165
M ++ + D T+ +LI + V +A + EMI R P + TY+ L+ C
Sbjct: 245 SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMY 304
Query: 166 DRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADT 225
R+ EA + M +G PDV Y+ +I G + +++ ++ +M ++G++ + T
Sbjct: 305 SRLDEAEEMFGFMVSKGCFPDVVTYSILIN-GYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 226 YSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFH-LHDAI 284
Y+ LI C +L+ A ++FR M+ G+ Y L++ C G+ K L D
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 285 KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRF 344
K + +VTYN +I G C G +A I + GL PD +Y+T++
Sbjct: 424 KNGM-------DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Query: 345 CKIGEPGMAYELMVEMNEKEIRGVLMKSC 373
K G A L +M E G+L C
Sbjct: 477 YKKGLRREADALFRKMKED---GILPNEC 502
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
D + +M GI + T + L+ C +LS A +M++ G + SL
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRG 324
+N FC ++ D + G + P++V YN +I G C + + AL +L
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGM------GYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
M + G+ PD V+Y+++IS C G A ++ M ++EI
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 8/169 (4%)
Query: 198 GDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTG 257
G + ++LD +L+ MV+ LP +S L+ ++ ++ L+ +M G+
Sbjct: 56 GIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHN 115
Query: 258 EPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFE 316
L+N FC + S FL + PS+VT+ +L+ G C R
Sbjct: 116 LCTCNILLNCFCRCSQLSLAL-------SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+AL + M MG P+ V Y+T+I CK + A +L+ M + I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 131/270 (48%), Gaps = 30/270 (11%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M KG + +YT L+ FC ++D+AY VL+EM G P+ +N L+ A+C+E R
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ EA I R M +G PDV +N++I+ G + E+ AL M+ +G++ + TY+
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLIS-GLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA---- 283
LI + + EA L EM+ G E Y SL+ C GE K L +
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 284 ------------IKG------------FLPDFVTRFS-PSLVTYNALIYGHCCMGRFEEA 318
I G F + V R S P +VT+N+LI G C GR E+
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
L + R + G+ PD V+++T++S CK G
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 33/266 (12%)
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
CH+ A V +M+ R P++ T+ +++A+C + + A +LR M G P+
Sbjct: 197 CHK----VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNS 252
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
IY T+I ++ AL+ +M G +P A+T++ +I+ LC R++EA +
Sbjct: 253 VIYQTLIHSLSKCN-RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGE------------------FSKVFH-------LHD 282
ML G + + Y LMN C G F+ + H L D
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 283 AIKGFLPDFVTRFS--PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
A K L D VT + P + TYN+LIYG+ G AL +L M G P+ SY+ +
Sbjct: 372 A-KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 341 ISRFCKIGEPGMAYELMVEMNEKEIR 366
+ FCK+G+ AY ++ EM+ ++
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLK 456
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 127/310 (40%), Gaps = 39/310 (12%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F ++ C + M + G + Y +LIH V++A ++L E
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD---------------- 186
M G P T+N ++ C+ DR+ EAA ++ M RG +PD
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 187 ---------------VDIYNTIITWGGDQELELDTALEFKAKMVEK-GILPHADTYSWLI 230
+ I+NT+I G LD A + MV GI+P TY+ LI
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIH-GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
E + A ++ +M G +YT L++ FC G+ + +++ + +
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA---- 452
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
P+ V +N LI C R EA+ I R M G PD +++++IS C++ E
Sbjct: 453 --DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 351 GMAYELMVEM 360
A L+ +M
Sbjct: 511 KHALWLLRDM 520
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 131/260 (50%), Gaps = 7/260 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I C +G + M+ + + D TYT++I FC ++ +A K+ EM
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
+G P T+ +L+ YC+ +++A + M G SP+V Y T+I G +E +LD
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID-GLCKEGDLD 473
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
+A E +M + G+ P+ TY+ ++ LC + EA L E GL+ YT+LM
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+A+C GE K + + G P++VT+N L+ G C G E+ +L M
Sbjct: 534 DAYCKSGEMDKAQEILKEMLG------KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 326 AEMGLSPDAVSYSTVISRFC 345
G++P+A ++++++ ++C
Sbjct: 588 LAKGIAPNATTFNSLVKQYC 607
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 144/304 (47%), Gaps = 18/304 (5%)
Query: 65 VGRIREVAE-------KTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQ 117
+GRI+E K ++S+ + + C G + M RKGL +
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISY--STVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
Y S+I + C ++ +A + SEMI +G P Y L+ +C+ +R A+
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M R ++PDV Y II+ G Q ++ A + +M KG+ P + T++ LI C
Sbjct: 377 MHSRDITPDVLTYTAIIS-GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFH-LHDAIKGFLPDFVTRFS 296
+ +AF + M++ G S YT+L++ C EG+ LH+ K
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-------IGLQ 488
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P++ TYN+++ G C G EEA+ ++ GL+ D V+Y+T++ +CK GE A E+
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 357 MVEM 360
+ EM
Sbjct: 549 LKEM 552
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 7/278 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
TA I C G M M KGL D T+T LI+ +C + A++V + MI
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G SP+V TY L+ C+E + A +L M GL P++ YN+I+ G + ++
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN-GLCKSGNIE 508
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A++ + G+ TY+ L+ + C + +A ++ +EML GL + LM
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
N FCL G L D K +P+ T+N+L+ +C + A I + M
Sbjct: 569 NGFCLHG------MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
G+ PD +Y ++ CK A+ L EM K
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 124/249 (49%), Gaps = 7/249 (2%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ + +Y +IH C + +A+ +L M +G++P V +Y+ +V YC + +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
++ VM +GL P+ IY +II + +L A E ++M+ +GILP Y+ LI
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLC-RICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
C + A F EM ++ YT++++ FC G+ + +A K F F
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD------MVEAGKLFHEMF 413
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
P VT+ LI G+C G ++A + M + G SP+ V+Y+T+I CK G+
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 352 MAYELMVEM 360
A EL+ EM
Sbjct: 474 SANELLHEM 482
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 9/266 (3%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
S T I C G M M + G + + TYT+LI C + ++D A ++L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
EM G P++ TYN +V C+ + EA ++ GL+ D Y T++ +
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD-AYCKS 539
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
E+D A E +M+ KG+ P T++ L+ C L + L ML G++ +
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALG 320
SL+ +C+ A D +R P TY L+ GHC +EA
Sbjct: 600 NSLVKQYCIRNNLK-------AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCK 346
+ + M G S +YS +I F K
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLK 678
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 139/324 (42%), Gaps = 27/324 (8%)
Query: 28 LLPLKVIIPGFAAAGN---------------LQPESNKVSGLWN--LKARTEKDVGRIR- 69
+L II GF G+ L+P+S + L N KA KD R+
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 70 EVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCH 129
+ + +V++ T I LC +G + M + GL + TY S+++ C
Sbjct: 446 HMIQAGCSPNVVTY--TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+++A K++ E G + TY L+ AYC+ + +A IL+ M +GL P +
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
+N ++ G L+ + M+ KGI P+A T++ L+ C L A ++++M
Sbjct: 564 FNVLMN-GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
G+ Y +L+ C + + L +KG FS S+ TY+ LI G
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG------KGFSVSVSTYSVLIKGF 676
Query: 310 CCMGRFEEALGILRGMAEMGLSPD 333
+F EA + M GL+ D
Sbjct: 677 LKRKKFLEAREVFDQMRREGLAAD 700
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 8/221 (3%)
Query: 145 DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
D G P V ++ + + +REA + M + GL VD N +T +
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
TA+ + E G+ + +Y+ +I +C R+ EA L M G + +Y+++
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRG 324
+N +C GE KV+ L + +K P+ Y ++I C + + EA
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKR------KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
M G+ PD V Y+T+I FCK G+ A + EM+ ++I
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 81 VSFNAT---ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAY 137
++ NAT + ++ C + + M +G+ D +TY +L+ C + +A+
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 138 KVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
+ EM +GFS SV+TY+ L++ + + + EA + M GL+ D +I++
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
++ +YN +I+ C +GR +EA +L M G +PD +SYSTV++ +C+ GE ++L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 358 VEMNEKEIR 366
M K ++
Sbjct: 305 EVMKRKGLK 313
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 131/260 (50%), Gaps = 7/260 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I C +G + M+ + + D TYT++I FC ++ +A K+ EM
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
+G P T+ +L+ YC+ +++A + M G SP+V Y T+I G +E +LD
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID-GLCKEGDLD 473
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
+A E +M + G+ P+ TY+ ++ LC + EA L E GL+ YT+LM
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+A+C GE K + + G P++VT+N L+ G C G E+ +L M
Sbjct: 534 DAYCKSGEMDKAQEILKEMLG------KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 326 AEMGLSPDAVSYSTVISRFC 345
G++P+A ++++++ ++C
Sbjct: 588 LAKGIAPNATTFNSLVKQYC 607
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 144/304 (47%), Gaps = 18/304 (5%)
Query: 65 VGRIREVAE-------KTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQ 117
+GRI+E K ++S+ + + C G + M RKGL +
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISY--STVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
Y S+I + C ++ +A + SEMI +G P Y L+ +C+ +R A+
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M R ++PDV Y II+ G Q ++ A + +M KG+ P + T++ LI C
Sbjct: 377 MHSRDITPDVLTYTAIIS-GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFH-LHDAIKGFLPDFVTRFS 296
+ +AF + M++ G S YT+L++ C EG+ LH+ K
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK-------IGLQ 488
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P++ TYN+++ G C G EEA+ ++ GL+ D V+Y+T++ +CK GE A E+
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 357 MVEM 360
+ EM
Sbjct: 549 LKEM 552
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 7/278 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
TA I C G M M KGL D T+T LI+ +C + A++V + MI
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G SP+V TY L+ C+E + A +L M GL P++ YN+I+ G + ++
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN-GLCKSGNIE 508
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A++ + G+ TY+ L+ + C + +A ++ +EML GL + LM
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
N FCL G L D K +P+ T+N+L+ +C + A I + M
Sbjct: 569 NGFCLHG------MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
G+ PD +Y ++ CK A+ L EM K
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 124/249 (49%), Gaps = 7/249 (2%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ + +Y +IH C + +A+ +L M +G++P V +Y+ +V YC + +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
++ VM +GL P+ IY +II + +L A E ++M+ +GILP Y+ LI
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLC-RICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
C + A F EM ++ YT++++ FC G+ + +A K F F
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD------MVEAGKLFHEMF 413
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
P VT+ LI G+C G ++A + M + G SP+ V+Y+T+I CK G+
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 352 MAYELMVEM 360
A EL+ EM
Sbjct: 474 SANELLHEM 482
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 113/266 (42%), Gaps = 9/266 (3%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
S T I C G M M + G + + TYT+LI C + ++D A ++L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
EM G P++ TYN +V C+ + EA ++ GL+ D Y T++ +
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD-AYCKS 539
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
E+D A E +M+ KG+ P T++ L+ C L + L ML G++ +
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALG 320
SL+ +C+ A D +R P TY L+ GHC +EA
Sbjct: 600 NSLVKQYCIRNNLK-------AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCK 346
+ + M G S +YS +I F K
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLK 678
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 139/324 (42%), Gaps = 27/324 (8%)
Query: 28 LLPLKVIIPGFAAAGN---------------LQPESNKVSGLWN--LKARTEKDVGRIR- 69
+L II GF G+ L+P+S + L N KA KD R+
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 70 EVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCH 129
+ + +V++ T I LC +G + M + GL + TY S+++ C
Sbjct: 446 HMIQAGCSPNVVTY--TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+++A K++ E G + TY L+ AYC+ + +A IL+ M +GL P +
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
+N ++ G L+ + M+ KGI P+A T++ L+ C L A ++++M
Sbjct: 564 FNVLMN-GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
G+ Y +L+ C + + L +KG FS S+ TY+ LI G
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG------KGFSVSVSTYSVLIKGF 676
Query: 310 CCMGRFEEALGILRGMAEMGLSPD 333
+F EA + M GL+ D
Sbjct: 677 LKRKKFLEAREVFDQMRREGLAAD 700
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 8/221 (3%)
Query: 145 DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
D G P V ++ + + +REA + M + GL VD N +T +
Sbjct: 170 DWGSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
TA+ + E G+ + +Y+ +I +C R+ EA L M G + +Y+++
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRG 324
+N +C GE KV+ L + +K P+ Y ++I C + + EA
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKR------KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
M G+ PD V Y+T+I FCK G+ A + EM+ ++I
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 81 VSFNAT---ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAY 137
++ NAT + ++ C + + M +G+ D +TY +L+ C + +A+
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 138 KVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
+ EM +GFS SV+TY+ L++ + + + EA + M GL+ D +I++
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
++ +YN +I+ C +GR +EA +L M G +PD +SYSTV++ +C+ GE ++L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 358 VEMNEKEIR 366
M K ++
Sbjct: 305 EVMKRKGLK 313
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 141/277 (50%), Gaps = 7/277 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
++ I LC G+ M + + D T+++LI +F + ++ +A ++ +EMI
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
RG +P TYN L+ +C+E+ + EA + +M +G PD+ Y+ +I + +D
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK-RVD 402
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
+ ++ KG++P+ TY+ L++ C +L+ A +LF+EM+ G+ Y L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ C GE +K + + ++ +R + + YN +I+G C + ++A + +
Sbjct: 463 DGLCDNGELNKALEIFEKMQK------SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 516
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
++ G+ PD V+Y+ +I CK G A L +M E
Sbjct: 517 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 157/317 (49%), Gaps = 18/317 (5%)
Query: 48 SNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXX 107
S+ + GL N + + +RE+ + +V+F +A I +G++
Sbjct: 284 SSLIGGLCN-DGKWDDGAKMLREMIGRNIIPDVVTF--SALIDVFVKEGKLLEAKELYNE 340
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +G+A D TY SLI FC + + +A ++ M+ +G P + TY+ L+ +YC+ R
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V + + R ++ +GL P+ YNT++ G Q +L+ A E +MV +G+ P TY
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLV-LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--K 285
L+ LC L++A ++F +M + ++ G Y +++ C + + L ++ K
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
G PD +VTYN +I G C G EA + R M E G +PD +Y+ +I
Sbjct: 520 GVKPD--------VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR--A 569
Query: 346 KIGEPGM--AYELMVEM 360
+G G+ + EL+ EM
Sbjct: 570 HLGGSGLISSVELIEEM 586
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 139/324 (42%), Gaps = 12/324 (3%)
Query: 45 QPESNKVSGLWN---LKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXX 101
+P+ VS L N LK R + + I + E Q V++ + LC G
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV--LNRLCKSGNSALA 229
Query: 102 XXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRA 161
M + + Y+ +I C D A + +EM +G V TY+ L+
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 162 YCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILP 221
C + + + A +LR M R + PDV ++ +I +E +L A E +M+ +GI P
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV-KEGKLLEAKELYNEMITRGIAP 348
Query: 222 HADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLH 281
TY+ LI C E L EA +F M+ G Y+ L+N++C K +
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC------KAKRVD 402
Query: 282 DAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
D ++ F P+ +TYN L+ G C G+ A + + M G+ P V+Y ++
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 342 SRFCKIGEPGMAYELMVEMNEKEI 365
C GE A E+ +M + +
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRM 486
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 11/255 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ D T T +I+ +C ++++ A+ VL G+ P T++ LV +C E R
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V EA ++ M + PD+ +T+I G + + AL +MVE G P TY
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLIN-GLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD--AIK 285
++ LC + A DLFR+M + Y+ ++++ C +G F L + +K
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
G D +VTY++LI G C G++++ +LR M + PD V++S +I F
Sbjct: 275 GIKAD--------VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326
Query: 346 KIGEPGMAYELMVEM 360
K G+ A EL EM
Sbjct: 327 KEGKLLEAKELYNEM 341
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 130/283 (45%), Gaps = 18/283 (6%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
+ T I C K ++ + G D T+++L++ FC + V +A ++
Sbjct: 106 YTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDR 165
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW---GGD 199
M++ P + T + L+ C + RV EA ++ M + G PD Y ++ G+
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
L AL+ KM E+ I YS +I SLC + +A LF EM G+
Sbjct: 226 SAL----ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEA 318
Y+SL+ C +G++ D K L + + R P +VT++ALI G+ EA
Sbjct: 282 TYSSLIGGLCNDGKW------DDGAK-MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCK---IGEPGMAYELMV 358
+ M G++PD ++Y+++I FCK + E ++LMV
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+ D L F M GI T + +I C +++L AF + + G ++
Sbjct: 85 QYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFS 144
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+L+N FCLEG S+ L D + + P LVT + LI G C GR EAL ++
Sbjct: 145 TLVNGFCLEGRVSEAVALVDRM------VEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLMKSCI 374
M E G PD V+Y V++R CK G +A +L +M E+ I+ +++ I
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 94/236 (39%), Gaps = 7/236 (2%)
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
+V+ A + MI P+ +N+L A + G + M G+ D+
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
+I ++ +L A + + G P T+S L+ C E R+SEA L M+
Sbjct: 110 IMINCYCRKK-KLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCC 311
++L+N CL+G S+ L D + + F P VTY ++ C
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY------GFQPDEVTYGPVLNRLCK 222
Query: 312 MGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
G AL + R M E + V YS VI CK G A L EM K I+
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 92 LCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS 151
LC G + M + + L Y +IH C+ +VD A+ + + D+G P
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT--WGGDQELELDTALE 209
V TYN ++ C++ + EA + R M + G +PD YN +I GG L +++E
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG---LISSVE 581
Query: 210 FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAF 243
+M G + T +++ + +RRL ++F
Sbjct: 582 LIEEMKVCGFSADSSTIK-MVIDMLSDRRLDKSF 614
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 4/199 (2%)
Query: 58 KARTEKDVGRI-REVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALD 116
KA+ D R+ RE++ K +++N + C G++ M +G+
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTL--VLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
TY L+ C E++KA ++ +M + + YN ++ C +V +A +
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 177 VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
++D+G+ PDV YN +I G ++ L A KM E G P TY+ LI +
Sbjct: 515 SLSDKGVKPDVVTYNVMI-GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573
Query: 237 RRLSEAFDLFREMLRGGLS 255
L + +L EM G S
Sbjct: 574 SGLISSVELIEEMKVCGFS 592
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 7/287 (2%)
Query: 63 KDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTS 122
+D ++ +V K S + + I LC GR+ M KG RTYT
Sbjct: 247 RDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTV 306
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
LI C + +DKA+ + EMI RG P+V TY L+ C + ++ EA G+ R M
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDR 366
Query: 183 LSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEA 242
+ P V YN +I G ++ + A E M ++ P+ T++ L+ LC + +A
Sbjct: 367 IFPSVITYNALIN-GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 243 FDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTY 302
L + ML GLS +Y L++ C EG + + L ++ F P +T+
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCF------DIEPDCLTF 479
Query: 303 NALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
A+I C G+ + A L M G+S D V+ +T+I CK+G+
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 132/274 (48%), Gaps = 8/274 (2%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI-DRG 147
+ LC G + + G LD TSL+ FC + A KV M +
Sbjct: 202 VNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVT 261
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTA 207
+P+ +Y+ L+ CE R+ EA G+ M ++G P Y +I D+ L +D A
Sbjct: 262 CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL-IDKA 320
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
+M+ +G P+ TY+ LI LC + ++ EA + R+M++ + Y +L+N
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 268 FCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAE 327
+C +G F L ++ P++ T+N L+ G C +G+ +A+ +L+ M +
Sbjct: 381 YCKDGRVVPAFELLTVMEK------RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 328 MGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN 361
GLSPD VSY+ +I C+ G AY+L+ MN
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 7/252 (2%)
Query: 114 ALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAG 173
A + +Y+ LIH C +++A+ + +M ++G PS TY L++A C+ + +A
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 174 ILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSL 233
+ M RG P+V Y T++ G ++ +++ A KMV+ I P TY+ LI
Sbjct: 323 LFDEMIPRGCKPNVHTY-TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGY 381
Query: 234 CFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVT 293
C + R+ AF+L M + + LM C G+ K HL +K L +
Sbjct: 382 CKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL---LKRMLDN--- 435
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
SP +V+YN LI G C G A +L M + PD ++++ +I+ FCK G+ +A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 354 YELMVEMNEKEI 365
+ M K I
Sbjct: 496 SAFLGLMLRKGI 507
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 161/406 (39%), Gaps = 68/406 (16%)
Query: 24 LRNRLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSF 83
LR+ L V+ A N S + GL + R E+ G ++ EK Q ++
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEV-GRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 84 NATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEM 143
T I+ LC +G + M +G + TYT LI C ++++A V +M
Sbjct: 305 --TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 144 IDRGFSPSVATYNKLVRAYCEEDRV----------------------------------- 168
+ PSV TYN L+ YC++ RV
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Query: 169 REAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
+A +L+ M D GLSPD+ YN +I G +E ++TA + + M I P T++
Sbjct: 423 YKAVHLLKRMLDNGLSPDIVSYNVLID-GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEF-SKVFHLHDAIK-- 285
+I + C + + A MLR G+S E T+L++ C G+ +F L +K
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 286 --------GFLPDFVTR------------------FSPSLVTYNALIYGHCCMGRFEEAL 319
+ D +++ PS+VTY L+ G G +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
IL M G P+ Y+ +I+ C+ G A +L+ M + +
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 113/257 (43%), Gaps = 10/257 (3%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G L+ Y+SL+ + AY M GF + Y +V A C+ A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALE-FKAKMVEKGILPHADTYSWLI 230
+ + G D I T + G + L L AL+ F E P++ +YS LI
Sbjct: 215 EMFMSKILKIGFVLDSHI-GTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILI 273
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
LC RL EAF L +M G YT L+ A C G K F+L D +
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFD-------E 326
Query: 291 FVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
+ R P++ TY LI G C G+ EEA G+ R M + + P ++Y+ +I+ +CK G
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 350 PGMAYELMVEMNEKEIR 366
A+EL+ M ++ +
Sbjct: 387 VVPAFELLTVMEKRACK 403
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 144/356 (40%), Gaps = 45/356 (12%)
Query: 43 NLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXX 102
N+ + + GL + E+ G R++ + ++++NA I C GR+
Sbjct: 335 NVHTYTVLIDGLCR-DGKIEEANGVCRKMVKDRIFPSVITYNAL--INGYCKDGRVVPAF 391
Query: 103 XXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAY 162
M ++ + RT+ L+ C + KA +L M+D G SP + +YN L+
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 163 CEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPH 222
C E + A +L M + PD + II Q + D A F M+ KGI
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG-KADVASAFLGLMLRKGISLD 510
Query: 223 ADTYSWLIVSLCFERRLSEAF------------------DLFREMLRGGLSTGEP----- 259
T + LI +C + +A ++ +ML G E
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 260 ------------AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIY 307
YT+L++ G+ + F + + +K ++ P++ Y +I
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK------LSGCLPNVYPYTIIIN 624
Query: 308 GHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
G C GR EEA +L M + G+SP+ V+Y+ ++ + G+ A E + M E+
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 134/320 (41%), Gaps = 19/320 (5%)
Query: 34 IIPGF---------AAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFN 84
++P F A N++ + + GL + + K V ++ + + +VS+N
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRV-GKPYKAVHLLKRMLDNGLSPDIVSYN 445
Query: 85 ATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI 144
I LC +G M MN + D T+T++I+ FC Q + D A L M+
Sbjct: 446 VL--IDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 145 DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
+G S T L+ C+ + R+A IL + + N I+ + ++
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS-KGCKV 562
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
L K+ + G++P TY+ L+ L ++ +F + M G YT +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRG 324
+N C G + L A++ + SP+ VTY ++ G+ G+ + AL +R
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQD------SGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 325 MAEMGLSPDAVSYSTVISRF 344
M E G + YS+++ F
Sbjct: 677 MVERGYELNDRIYSSLLQGF 696
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 22/239 (9%)
Query: 74 KTNQKGLVSFNATAT--IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQE 131
K N+ GLV T T + L G + M G + YT +I+ C
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
V++A K+LS M D G SP+ TY +V+ Y ++ A +R M +RG + IY+
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYS 690
Query: 192 T-----IITWGGDQELELDTALEFKAKMVEKGILPHADTYS------------WLIVSLC 234
+ +++ G E T + + + + + +L+ LC
Sbjct: 691 SLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLC 750
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDF 291
E R E+ DL + +L G+ E A +M ++C + + +K L + GF+P F
Sbjct: 751 KEGRTDESNDLVQNVLERGVFL-EKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSF 808
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 143/299 (47%), Gaps = 9/299 (3%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+R++ E+ + V + + I LC G + M KG D TY +LI F
Sbjct: 251 LRKMEERNIKLDAVKY--SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C+ D K+L +MI R SP+V T++ L+ ++ +E ++REA +L+ M RG++P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
YN++I G +E L+ A++ M+ KG P T++ LI C R+ + +LFR
Sbjct: 369 ITYNSLID-GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIY 307
EM G+ Y +L+ FC G+ L A K F R P +V+Y L+
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGK------LEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 308 GHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
G C G E+AL I + + + D Y +I C + A++L + K ++
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 138/306 (45%), Gaps = 10/306 (3%)
Query: 51 VSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNR 110
V+GL L + V I + E Q V++ + +C G+ M
Sbjct: 200 VNGLC-LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV--MCKSGQTALAMELLRKMEE 256
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
+ + LD Y+ +I C +D A+ + +EM +GF + TYN L+ +C R +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A +LR M R +SP+V ++ +I +E +L A + +M+++GI P+ TY+ LI
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLID-SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
C E RL EA + M+ G + L+N +C K + D ++ F
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC------KANRIDDGLELFREM 429
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
+ + VTYN L+ G C G+ E A + + M + PD VSY ++ C GE
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 351 GMAYEL 356
A E+
Sbjct: 490 EKALEI 495
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 130/260 (50%), Gaps = 11/260 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M KG+A T + +I+ FC ++ A+ + +++ G+ P +N L+ C E R
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V EA ++ M + G P + NT++ G ++ A+ +MVE G P+ TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVN-GLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD--AIK 285
++ +C + + A +L R+M + Y+ +++ C +G F+L + IK
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
GF D ++TYN LI G C GR+++ +LR M + +SP+ V++S +I F
Sbjct: 293 GFKAD--------IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 346 KIGEPGMAYELMVEMNEKEI 365
K G+ A +L+ EM ++ I
Sbjct: 345 KEGKLREADQLLKEMMQRGI 364
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 154/363 (42%), Gaps = 61/363 (16%)
Query: 33 VIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDL 92
+II G G+L N L+N E+ K + ++++N I
Sbjct: 268 IIIDGLCKDGSLDNAFN----LFN-------------EMEIKGFKADIITYNTL--IGGF 308
Query: 93 CGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSV 152
C GR M ++ ++ + T++ LI F + ++ +A ++L EM+ RG +P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 153 ATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKA 212
TYN L+ +C+E+R+ EA ++ +M +G PD+ +N +I G + +D LE
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN-GYCKANRIDDGLELFR 427
Query: 213 KMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG 272
+M +G++ + TY+ L+ C +L A LF+EM+ + +Y L++ C G
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 273 EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL---------- 322
E K + I+ ++ + Y +I+G C + ++A +
Sbjct: 488 ELEKALEIFGKIEK------SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 323 -------------------------RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
R M E G +PD ++Y+ +I + A EL+
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Query: 358 VEM 360
EM
Sbjct: 602 EEM 604
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 167 RVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTY 226
+ +A + R M P V +N + + + + + L +M KGI T
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTK-QYELVLALCKQMESKGIAHSIYTL 126
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG 286
S +I C R+LS AF ++++ G + +L+N CLE S+ L D +
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM-- 184
Query: 287 FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
P+L+T N L+ G C G+ +A+ ++ M E G P+ V+Y V++ CK
Sbjct: 185 ----VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 347 IGEPGMAYELMVEMNEKEIR 366
G+ +A EL+ +M E+ I+
Sbjct: 241 SGQTALAMELLRKMEERNIK 260
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 5/236 (2%)
Query: 60 RTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
R E+ + + + K +++FN I C R+ M+ +G+ + T
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNIL--INGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y +L+ FC +++ A K+ EM+ R P + +Y L+ C+ + +A I +
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
+ D+ IY II G ++D A + + KG+ A Y+ +I LC + L
Sbjct: 501 KSKMELDIGIY-MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDFVT 293
S+A LFR+M G + E Y L+ A + + + L + +K GF D T
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 51/115 (44%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I +C ++ + KG+ LD R Y +I C ++ + KA + +M + G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELE 203
+P TYN L+RA+ +D AA ++ M G DV +I EL+
Sbjct: 575 APDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELD 629
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 141/309 (45%), Gaps = 42/309 (13%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I LC M M+ KG+ D TY+SLI C+ A ++LS+MI+R
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
+P+V T++ L+ A+ +E ++ EA + M R + PD+ Y+++I G LD A
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-GFCMHDRLDEAK 383
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
M+ K P+ TYS LI C +R+ E +LFREM + GL YT+L++ F
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 269 -----------------------------------CLEGEFSKVFHLHDAIKGFLPDFVT 293
C G+ +K + + ++ +
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR------S 497
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
P + TYN +I G C G+ E+ + ++ G+SP+ ++Y+T+IS FC+ G A
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 354 YELMVEMNE 362
L+ +M E
Sbjct: 558 DSLLKKMKE 566
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 133/283 (46%), Gaps = 9/283 (3%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
++ + C R+ M G D T+T+LIH + +A ++ +M+
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
RG P + TY +V C+ + A +L+ M + DV IYNTII G + +D
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID-GLCKYKHMD 275
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
AL +M KGI P TYS LI LC R S+A L +M+ ++ +++L+
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRG 324
+AF EG+ + L+D + + R P + TY++LI G C R +EA +
Sbjct: 336 DAFVKEGKLVEAEKLYD-------EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
M P+ V+YST+I FCK EL EM+++ + G
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 149/308 (48%), Gaps = 15/308 (4%)
Query: 53 GLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKG 112
G W+ +R D+ E+ +V+F +A I +G++ M ++
Sbjct: 307 GRWSDASRLLSDM------IERKINPNVVTF--SALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
+ D TY+SLI+ FC + +D+A + MI + P+V TY+ L++ +C+ RV E
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
+ R M+ RGL + Y T+I G Q + D A +MV G+ P+ TY+ L+
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLI-HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
LC +L++A +F + R + Y ++ C G+ + D + F +
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK------VEDGWELFCNLSL 531
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
SP+++ YN +I G C G EEA +L+ M E G P++ +Y+T+I + G+
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 353 AYELMVEM 360
+ EL+ EM
Sbjct: 592 SAELIKEM 599
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 7/258 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G++ D TY+ I+ FC + ++ A VL++M+ G+ P + T + L+ YC R
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +A ++ M + G PD + T+I G + A+ +MV++G P TY
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLI-HGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ LC + A L ++M +G + Y ++++ C K H+ DA+ F
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC------KYKHMDDALNLF 281
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P + TY++LI C GR+ +A +L M E ++P+ V++S +I F K
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 348 GEPGMAYELMVEMNEKEI 365
G+ A +L EM ++ I
Sbjct: 342 GKLVEAEKLYDEMIKRSI 359
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 21/270 (7%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
+F T I L + M ++G D TY ++++ C + ++D A +L
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT------ 195
+M V YN ++ C+ + +A + M ++G+ PDV Y+++I+
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 196 -WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
W L D M+E+ I P+ T+S LI + E +L EA L+ EM++ +
Sbjct: 308 RWSDASRLLSD--------MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 255 STGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR 314
Y+SL+N FC+ + H+ + + P++VTY+ LI G C R
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELM------ISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVISRF 344
EE + + R M++ GL + V+Y+T+I F
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 11/237 (4%)
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
+VD A + +M+ PS+ +NKL+ A + ++ + M G+S D+ Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
I + +L AL AKM++ G P T S L+ C +R+S+A L +M+
Sbjct: 123 IFINCFCRRS-QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGH 309
G +T+L++ L + S+ L D + +G PD LVTY ++ G
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD--------LVTYGTVVNGL 233
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
C G + AL +L+ M + + D V Y+T+I CK A L EM+ K IR
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 9/225 (4%)
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
+M G S + TY+ + +C ++ A +L M G PD+ ++++ G
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN-GYCHS 166
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
+ A+ +MVE G P T++ LI L + SEA L +M++ G Y
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 262 TSLMNAFCLEGEFSKVFHLHDAI-KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
+++N C G+ L + KG + +V YN +I G C ++AL
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKG-------KIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+ M G+ PD +YS++IS C G A L+ +M E++I
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ I+ C R+ M+++GL + TYT+LIH F + D A V +M+
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVM--------------------------- 178
G P++ TYN L+ C+ ++ +A + +
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 179 --------ADRGLSPDVDIYNTIITW---GGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +G+SP+V YNT+I+ G +E E D+ L+ KM E G LP++ TY+
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE-EADSLLK---KMKEDGPLPNSGTYN 577
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF 278
LI + + + +L +EM G + G+ + L+ +G K F
Sbjct: 578 TLIRARLRDGDREASAELIKEMRSCGFA-GDASTIGLVTNMLHDGRLDKSF 627
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 44/250 (17%)
Query: 147 GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDT 206
G P+V ++ L + C E A+G R + LS DI +++D
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLS---DI------------IKVDD 66
Query: 207 ALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMN 266
A++ MV+ P ++ L+ ++ + L +M G+S Y+ +N
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 267 AFCLEGEFSKVFH-LHDAIK-GFLPDFVTR---------------------------FSP 297
FC + S L +K G+ PD VT + P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
T+ LI+G + EA+ ++ M + G PD V+Y TV++ CK G+ +A L+
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 358 VEMNEKEIRG 367
+M + +I
Sbjct: 247 KKMEKGKIEA 256
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 130/282 (46%), Gaps = 12/282 (4%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V++N + C KGR M KG+ D TY LIH C + K Y +
Sbjct: 268 IVTYNTV--LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
L +M R P+ TYN L+ + E +V A+ +L M GLSP+ +N +I G
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID-GHI 384
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
E AL+ M KG+ P +Y L+ LC A + M R G+ G
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
YT +++ C G + L + + D P +VTY+ALI G C +GRF+ A
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGID------PDIVTYSALINGFCKVGRFKTAK 498
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIG---EPGMAYELMV 358
I+ + +GLSP+ + YST+I C++G E YE M+
Sbjct: 499 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 157/355 (44%), Gaps = 14/355 (3%)
Query: 10 NTNKVTMMLRVKTILRNRLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGR-- 67
N+N + ++ LR ++ + I P + + ++ +DV
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 68 -IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHM 126
++E+ ++ + +FN I LC +G M + G A TY +++H
Sbjct: 220 FLKEMLKRKICPDVATFNIL--INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 127 FCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD 186
+C + A ++L M +G V TYN L+ C +R+ + +LR M R + P+
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 187 VDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLF 246
YNT+I G E ++ A + +M+ G+ P+ T++ LI E EA +F
Sbjct: 338 EVTYNTLIN-GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 247 REMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNAL 305
M GL+ E +Y L++ C EF D +GF +TY +
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEF-------DLARGFYMRMKRNGVCVGRITYTGM 449
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
I G C G +EA+ +L M++ G+ PD V+YS +I+ FCK+G A E++ +
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 7/229 (3%)
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW 196
+ L EM+ R P VAT+N L+ C E +++ +++ M G +P + YNT++ W
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
+ A+E M KG+ TY+ LI LC R+++ + L R+M + +
Sbjct: 278 YCKKG-RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE 316
E Y +L+N F EG+ L + + F SP+ VT+NALI GH G F+
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSF------GLSPNHVTFNALIDGHISEGNFK 390
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
EAL + M GL+P VSY ++ CK E +A + M +
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 439
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 127/277 (45%), Gaps = 7/277 (2%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
+ LC M R G+ + + TYT +I C +D+A +L+EM G
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P + TY+ L+ +C+ R + A I+ + GLSP+ IY+T+I + + L A+
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI-YNCCRMGCLKEAI 533
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
M+ +G T++ L+ SLC +++EA + R M G+ ++ L+N +
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
GE K F + D + P+ TY +L+ G C G EA L+ + +
Sbjct: 594 GNSGEGLKAFSVFDEMTK------VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 647
Query: 329 GLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+ D V Y+T+++ CK G A L EM ++ I
Sbjct: 648 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 10/306 (3%)
Query: 62 EKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
E D+ R + K N + T I LC G + M++ G+ D TY+
Sbjct: 423 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 482
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
+LI+ FC A +++ + G SP+ Y+ L+ C ++EA I M
Sbjct: 483 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 542
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
G + D +N ++T + ++ A EF M GILP+ ++ LI +
Sbjct: 543 GHTRDHFTFNVLVT-SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVT 301
AF +F EM + G Y SL+ C G HL +A K + V
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG------HLREAEKFLKSLHAVPAAVDTVM 655
Query: 302 YNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN 361
YN L+ C G +A+ + M + + PD+ +Y+++IS C+ G+ +A ++
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA---ILFAK 712
Query: 362 EKEIRG 367
E E RG
Sbjct: 713 EAEARG 718
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 8/265 (3%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F + LC G++ M G+ + ++ LI+ + + E KA+ V E
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M G P+ TY L++ C+ +REA L+ + + D +YNT++T +
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT-AMCKSG 667
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM-LRGGLSTGEPAY 261
L A+ +MV++ ILP + TY+ LI LC + + A +E RG + + Y
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGI 321
T ++ G++ + + + +P +VT NA+I G+ MG+ E+ +
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNL------GHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 322 LRGMAEMGLSPDAVSYSTVISRFCK 346
L M P+ +Y+ ++ + K
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSK 806
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 122/309 (39%), Gaps = 31/309 (10%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+A I C GR + R GL+ + Y++LI+ C + +A ++ MI
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G + T+N LV + C+ +V EA +R M G+ P+ ++ +I G+ L
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A +M + G P TY L+ LC L EA + + + Y +L+
Sbjct: 602 -AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Query: 266 NAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFS--------------------------- 296
A C G +K L + + LPD T S
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720
Query: 297 -PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
P+ V Y + G G+++ + M +G +PD V+ + +I + ++G+ +
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 780
Query: 356 LMVEMNEKE 364
L+ EM +
Sbjct: 781 LLPEMGNQN 789
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 7/244 (2%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY L+H + +++V ++ + +I G P T + LV CE + + IL+
Sbjct: 796 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF 855
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
RG+ D +N +I+ E++ A + M GI DT ++ L R
Sbjct: 856 ICRGVEVDRYTFNMLISKCCANG-EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHR 914
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
E+ + EM + G+S Y L+N C G+ F + + + + P
Sbjct: 915 FQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM------IAHKICPP 968
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
V +A++ G+ +EA +LR M +M L P S++T++ CK G A EL V
Sbjct: 969 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 1028
Query: 359 EMNE 362
M+
Sbjct: 1029 VMSN 1032
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 7/231 (3%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
+G+ +D+ T+ LI C E++ A+ ++ M G S T + +V R +E
Sbjct: 858 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 917
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
+ +L M+ +G+SP+ Y +I G + ++ TA K +M+ I P S ++
Sbjct: 918 SRMVLHEMSKQGISPESRKYIGLIN-GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 976
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
+L + EA L R ML+ L ++T+LM+ C G + L +
Sbjct: 977 RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN---- 1032
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
LV+YN LI G C G A + M G +A +Y +I
Sbjct: 1033 --CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M+++G++ + R Y LI+ C ++ A+ V EMI P + +VRA + +
Sbjct: 925 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 984
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
EA +LR M L P + + T++ ++ ALE + M G+ +Y+
Sbjct: 985 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE-ALELRVVMSNCGLKLDLVSYN 1043
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
LI LC + ++ AF+L+ EM G Y +L+
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 86/224 (38%), Gaps = 15/224 (6%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I C G + M G++LD+ T +++ + ++ VL EM +G
Sbjct: 871 ISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGI 930
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSP----DVDIYNTIITWGGDQELEL 204
SP Y L+ C ++ A + M + P + + + G E L
Sbjct: 931 SPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATL 990
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
K K+V P +++ L+ C + EA +L M GL +Y L
Sbjct: 991 LLRFMLKMKLV-----PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYG 308
+ C +G+ + F L++ +KG F + TY ALI G
Sbjct: 1046 ITGLCAKGDMALAFELYEEMKG------DGFLANATTYKALIRG 1083
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 32/368 (8%)
Query: 12 NKVTMMLRVKTILRNRLLPLKVIIPGFAAAGNL-----QPESNKVSGLWN---LKARTEK 63
N T+ + + R R L L F+A G + +P++ S L N L+ R +
Sbjct: 106 NLYTLSIMINCCCRCRKLSL-----AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 64 DVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSL 123
+ + + E ++ L++ NA + LC G++ M G ++ TY +
Sbjct: 161 ALELVDRMVEMGHKPTLITLNAL--VNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPV 218
Query: 124 IHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGL 183
+ + C + A ++L +M +R Y+ ++ C++ + A + M +G
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 184 SPDVDIYNTII---TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLS 240
D+ IY T+I + G D + M+++ I P +S LI E +L
Sbjct: 279 KADIIIYTTLIRGFCYAG----RWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 241 EAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPS 298
EA +L +EM++ G+S YTSL++ FC E + K H+ D + KG P+
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG--------CGPN 386
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
+ T+N LI G+C ++ L + R M+ G+ D V+Y+T+I FC++G+ +A EL
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 359 EMNEKEIR 366
EM + +R
Sbjct: 447 EMVSRRVR 454
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 142/315 (45%), Gaps = 10/315 (3%)
Query: 51 VSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNR 110
V+GL L + V I + E Q V++ + +C G+ M
Sbjct: 184 VNGLC-LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV--MCKSGQTALAMELLRKMEE 240
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
+ + LD Y+ +I C +D A+ + +EM +GF + Y L+R +C R +
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A +LR M R ++PDV ++ +I +E +L A E +M+++GI P TY+ LI
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFV-KEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
C E +L +A + M+ G + L+N +C K + D ++ F
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC------KANLIDDGLELFRKM 413
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
+ VTYN LI G C +G+ E A + + M + PD VSY ++ C GEP
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 351 GMAYELMVEMNEKEI 365
A E+ ++ + ++
Sbjct: 474 EKALEIFEKIEKSKM 488
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 11/300 (3%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+R++ E+ + V + + I LC G + M KG D YT+LI F
Sbjct: 235 LRKMEERKIKLDAVKY--SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C+ D K+L +MI R +P V ++ L+ + +E ++REA + + M RG+SPD
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y ++I G +E +LD A MV KG P+ T++ LI C + + +LFR
Sbjct: 353 VTYTSLID-GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVT-RFSPSLVTYNALI 306
+M G+ Y +L+ FC G+ + K + V+ R P +V+Y L+
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKL-------EVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 307 YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
G C G E+AL I + + + D Y+ +I C + A++L + K ++
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 131/277 (47%), Gaps = 7/277 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I+ C GR M ++ + D +++LI F + ++ +A ++ EMI
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
RG SP TY L+ +C+E+++ +A +L +M +G P++ +N +I L +D
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL-ID 404
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
LE KM +G++ TY+ LI C +L A +LF+EM+ + +Y L+
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ C GE K + + I+ ++ + YN +I+G C + ++A + +
Sbjct: 465 DGLCDNGEPEKALEIFEKIEK------SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
G+ PD +Y+ +I CK G A L +M E
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 151/310 (48%), Gaps = 17/310 (5%)
Query: 52 SGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRK 111
+G W+ A+ +R++ ++ +V+F +A I +G++ M ++
Sbjct: 295 AGRWDDGAKL------LRDMIKRKITPDVVAF--SALIDCFVKEGKLREAEELHKEMIQR 346
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G++ D TYTSLI FC + ++DKA +L M+ +G P++ T+N L+ YC+ + + +
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQEL-ELDTALEFKAKMVEKGILPHADTYSWLI 230
+ R M+ RG+ D YNT+I G EL +L+ A E +MV + + P +Y L+
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQ--GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
LC +A ++F ++ + + Y +++ C SKV DA F
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC---NASKV---DDAWDLFCSL 518
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
+ P + TYN +I G C G EA + R M E G SP+ +Y+ +I G+
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Query: 351 GMAYELMVEM 360
+ +L+ E+
Sbjct: 579 TKSAKLIEEI 588
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+ D L+ +M KGI + T S +I C R+LS AF ++++ G ++
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+L+N CLEG S+ L D + P+L+T NAL+ G C G+ +A+ ++
Sbjct: 147 TLINGLCLEGRVSEALELVDRM------VEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
M E G P+ V+Y V+ CK G+ +A EL+ +M E++I+
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIK 244
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M+ +G+ D TY +LI FC +++ A ++ EM+ R P + +Y L+ C+
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+A I + + D+ IYN II G ++D A + + KG+ P TY+
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIII-HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK-- 285
+I LC + LSEA LFR+M G S Y L+ A EG+ +K L + IK
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 286 GFLPDFVT 293
GF D T
Sbjct: 592 GFSVDAST 599
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
++ L + ++ D + +M +G + ++ T + ++ C ++ A + +
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKII 134
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G PD ++T+I G E + ALE +MVE G P T + L+ LC ++
Sbjct: 135 KLGYEPDTVTFSTLIN-GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 193
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL----------HDAIK---- 285
S+A L M+ G E Y ++ C G+ + L DA+K
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 286 --GFLPDF-------------VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGL 330
G D + F ++ Y LI G C GR+++ +LR M + +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 331 SPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+PD V++S +I F K G+ A EL EM ++ I
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 11/283 (3%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
S+ I C G + G DQ TY SLI CH+ E ++A + +
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
E + +G P+V YN L++ + + EAA + M+++GL P+V +N ++
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
D K M+ KG P T++ LI + ++ A ++ ML G+ Y
Sbjct: 441 CVSDADGLVKV-MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 262 TSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
SL+N C +F V + + KG +P+L T+N L+ C + +EAL
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKG--------CAPNLFTFNILLESLCRYRKLDEAL 551
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
G+L M ++PDAV++ T+I FCK G+ AY L +M E
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 9/312 (2%)
Query: 51 VSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNR 110
+ GL + + T + + E K + ++ +N I+ L +G + M+
Sbjct: 363 IDGLCH-EGETNRALALFNEALGKGIKPNVILYNTL--IKGLSNQGMILEAAQLANEMSE 419
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
KGL + +T+ L++ C V A ++ MI +G+ P + T+N L+ Y + ++
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A IL VM D G+ PDV YN+++ G + + + +E MVEKG P+ T++ L+
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLN-GLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
SLC R+L EA L EM ++ + +L++ FC G+ + L ++
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE---- 594
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
+ S S TYN +I+ A + + M + L PD +Y ++ FCK G
Sbjct: 595 -AYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 351 GMAYELMVEMNE 362
+ Y+ ++EM E
Sbjct: 654 NLGYKFLLEMME 665
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 130/299 (43%), Gaps = 38/299 (12%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
L +FN + LC KG + + ++G+ + TY I C + E+D A ++
Sbjct: 216 LSTFNKLLRV--LCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRM 273
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW--- 196
+ +I++G P V TYN L+ C+ + +EA L M + GL PD YNT+I
Sbjct: 274 VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCK 333
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
GG +L A V G +P TY LI LC E + A LF E L G+
Sbjct: 334 GGMVQL----AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVT--------------------- 293
Y +L+ +G + L + + KG +P+ T
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 294 ------RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ P + T+N LI+G+ + E AL IL M + G+ PD +Y+++++ CK
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 118/237 (49%), Gaps = 7/237 (2%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G++L T+ L+ + C + +V + K+L ++I RG P++ TYN ++ C+ + A
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
++ + ++G PDV YN +I +G + + A + KMV +G+ P + TY+ LI
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLI-YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
C + A + + + G + Y SL++ C EGE ++ L + G
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG----- 384
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
P+++ YN LI G G EA + M+E GL P+ +++ +++ CK+G
Sbjct: 385 -KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 7/281 (2%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
++ T ++ C R M+ +G ++ Y +++ F + + Y++ +
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M+ G S ++T+NKL+R C++ V+E +L + RG+ P++ YN I G Q
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI-QGLCQRG 265
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
ELD A+ ++E+G P TY+ LI LC + EA +M+ GL Y
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+L+ +C G + L + I G F P TY +LI G C G AL +
Sbjct: 326 TLIAGYCKGG----MVQLAERIVG--DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
G+ P+ + Y+T+I G A +L EM+EK
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 153/360 (42%), Gaps = 52/360 (14%)
Query: 54 LWNLKARTEKDVGRIREVAEKTNQ---KGLV----SFNATATIQDLCGKGRMXXXXXXXX 106
L+N + + G I E A+ N+ KGL+ +FN + LC G +
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL--VNGLCKMGCVSDADGLVK 450
Query: 107 XMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEED 166
M KG D T+ LIH + Q +++ A ++L M+D G P V TYN L+ C+
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 167 RVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTY 226
+ + + M ++G +P++ +N I+ + +LD AL +M K + P A T+
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFN-ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRG-GLSTGEPAYTSLMNAF----------------- 268
LI C L A+ LFR+M +S+ P Y +++AF
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 269 --CLEGE----------FSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE 316
CL + F K +++ K L F PSL T +I C R
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLMKSCINH 376
EA GI+ M + GL P+AV + C + + +A +V + +L KSCI +
Sbjct: 690 EAAGIIHRMVQKGLVPEAV------NTICDVDKKEVAAPKLV------LEDLLKKSCITY 737
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 7/230 (3%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
+Y +++ + D+A+KV M DRG +P V ++ ++++C+ R A +L M
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+ +G +V Y T++ ++ + + E KM+ G+ T++ L+ LC +
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAE-GYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
+ E L ++++ G+ Y + C GE + + P P
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP------KPD 285
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
++TYN LIYG C +F+EA L M GL PD+ +Y+T+I+ +CK G
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 148/294 (50%), Gaps = 13/294 (4%)
Query: 77 QKGLVSFNATATI--QDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVD 134
+ GL+ N TI Q C KG + M ++G A+D TY +++H C ++ +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 135 KAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
+A K+ +EM +R P T L+ +C+ ++ A + + M ++ + DV YNT++
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 195 TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
G + ++DTA E A MV K ILP +YS L+ +LC + L+EAF ++ EM+ +
Sbjct: 523 D-GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 255 STGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMG 313
S++ +C G S + FL ++ F P ++YN LIYG
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDG-------ESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 314 RFEEALGILRGMAEM--GLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+A G+++ M E GL PD +Y++++ FC+ + A ++ +M E+ +
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 150/319 (47%), Gaps = 16/319 (5%)
Query: 54 LWNLKARTEKDVGRIREVAEK---TNQKGL-VSFNA-TATIQDLCGKGRMXXXXXXXXXM 108
+++L RT ++RE E KG VS +A A I L G + +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
+R G+ ++ T +++ C +++K LS++ ++G P + TYN L+ AY + +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 169 REAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
EA ++ M +G SP V YNT+I G + + + A E A+M+ G+ P + TY
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVIN-GLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--G 286
L++ C + + E +F +M + ++S+M+ F G K +++K G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 287 FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+PD V Y LI G+C G A+ + M + G + D V+Y+T++ CK
Sbjct: 406 LIPDN--------VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 347 IGEPGMAYELMVEMNEKEI 365
G A +L EM E+ +
Sbjct: 458 RKMLGEADKLFNEMTERAL 476
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 141/324 (43%), Gaps = 46/324 (14%)
Query: 79 GLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYK 138
G+ + + LC G+M + KG+ D TY +LI + + +++A++
Sbjct: 232 GINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWG- 197
+++ M +GFSP V TYN ++ C+ + A + M GLSPD Y +++
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 198 --GD-------------------------------QELELDTALEFKAKMVEKGILPHAD 224
GD + LD AL + + E G++P
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC---LEGEFSKVFHLH 281
Y+ LI C + +S A +L EML+ G + Y ++++ C + GE K+F+
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 282 DAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
+ PD T LI GHC +G + A+ + + M E + D V+Y+T++
Sbjct: 472 TE-RALFPDS--------YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 342 SRFCKIGEPGMAYELMVEMNEKEI 365
F K+G+ A E+ +M KEI
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEI 546
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 147/341 (43%), Gaps = 32/341 (9%)
Query: 59 ARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQR 118
+ EK + +V EK +V++N I KG M M KG +
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTL--ISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY ++I+ C + ++A +V +EM+ G SP TY L+ C++ V E + M
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
R + PD+ ++++++ + LD AL + + E G++P Y+ LI C +
Sbjct: 367 RSRDVVPDLVCFSSMMSLF-TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFC---LEGEFSKVFH---------------- 279
+S A +L EML+ G + Y ++++ C + GE K+F+
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 280 ----------LHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG 329
L +A++ F R +VTYN L+ G +G + A I M
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 330 LSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLM 370
+ P +SYS +++ C G A+ + EM K I+ +M
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 3/169 (1%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
+ LC KG + M K + S+I +C L +MI GF
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADR--GLSPDVDIYNTIITWGGDQELELDT 206
P +YN L+ + E+ + +A G+++ M + GL PDV YN+I+ G ++ ++
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL-HGFCRQNQMKE 675
Query: 207 ALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS 255
A KM+E+G+ P TY+ +I + L+EAF + EML+ G S
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 118/275 (42%), Gaps = 46/275 (16%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMI--------------DRGFS---PSVATYNKLVRA 161
+ +++IH+ + A L MI D FS + + ++ L+R
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRT 174
Query: 162 YCEEDRVREAAGILRVMADRGLSPDVDIYNTII-----------TWGGDQELELDTALEF 210
Y + ++REA ++ +G + +D N +I WG QE+
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS------- 227
Query: 211 KAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCL 270
G+ + T + ++ +LC + ++ + ++ G+ Y +L++A+
Sbjct: 228 -----RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 271 EGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGL 330
+G + F L +A+ G FSP + TYN +I G C G++E A + M GL
Sbjct: 283 KGLMEEAFELMNAMPG------KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
Query: 331 SPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
SPD+ +Y +++ CK G+ ++ +M +++
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ I+ C G M +G D +Y +LI+ F +E + KA+ ++ +M +
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 146 R--GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELE 203
G P V TYN ++ +C +++++EA +LR M +RG++PD Y +I Q+
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQD-N 707
Query: 204 LDTALEFKAKMVEKGILP 221
L A +M+++G P
Sbjct: 708 LTEAFRIHDEMLQRGFSP 725
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
GL D TY S++H FC Q ++ +A VL +MI+RG +P +TY ++ + +D + EA
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 172 AGILRVMADRGLSPD 186
I M RG SPD
Sbjct: 712 FRIHDEMLQRGFSPD 726
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 153/349 (43%), Gaps = 51/349 (14%)
Query: 67 RIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHM 126
R+ E+ EK Q + ++NA I C R+ M K + D TY +I
Sbjct: 145 RVMEILEKFGQPDVFAYNAL--INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202
Query: 127 FCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD 186
C + ++D A KVL++++ P+V TY L+ A E V EA ++ M RGL PD
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
Query: 187 VDIYNTIITWGG-----DQELELDTALEFKA----------------------------- 212
+ YNTII D+ E+ LE K
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Query: 213 KMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG 272
KM + P+ TYS LI +LC + ++ EA +L + M GL+ +Y L+ AFC EG
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 273 EFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGL 330
+ + G LPD +V YN ++ C G+ ++AL I + E+G
Sbjct: 383 RLDVAIEFLETMISDGCLPD--------IVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 331 SPDAVSYSTVISRFCKIGEPGMAYELMVEM-----NEKEIRGVLMKSCI 374
SP++ SY+T+ S G+ A +++EM + EI M SC+
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 135/303 (44%), Gaps = 30/303 (9%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F I+ +C +G + + KG D +Y L+ +Q + ++ K++++
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M P+V TY+ L+ C + ++ EA +L++M ++GL+PD Y+ +I +E
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA-AFCREG 382
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
LD A+EF M+ G LP Y+ ++ +LC + +A ++F ++ G S +Y
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 263 SLMNAFCLEGEFSKVFH--LHDAIKGFLPDFVT--------------------------- 293
++ +A G+ + H L G PD +T
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSC 502
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
F PS+VTYN ++ G C R E+A+ +L M G P+ +Y+ +I G A
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
Query: 354 YEL 356
EL
Sbjct: 563 MEL 565
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 64/301 (21%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVA----------------------------- 153
+ H C ++ +L M+ +G++P V
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 154 -----TYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
YN L+ +C+ +R+ +A +L M + SPD YN +I + +LD AL
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG-KLDLAL 213
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+ +++ P TY+ LI + E + EA L EML GL Y +++
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 269 CLEGEFSKVFHL--HDAIKGFLPD---------------------------FVTRFSPSL 299
C EG + F + + +KG PD F + P++
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
VTY+ LI C G+ EEA+ +L+ M E GL+PDA SY +I+ FC+ G +A E +
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 360 M 360
M
Sbjct: 394 M 394
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 1/168 (0%)
Query: 84 NATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEM 143
N + LC G+ + G + + +Y ++ + +A ++ EM
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 144 IDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELE 203
+ G P TYN ++ C E V EA +L M P V YN I+ G +
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN-IVLLGFCKAHR 523
Query: 204 LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
++ A+ MV G P+ TY+ LI + F +EA +L +++R
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 140/302 (46%), Gaps = 26/302 (8%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I+ C G M M KG++ TY LI + + E DK + +L EM D G
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P+V +Y L+ C+ ++ EA + R M DRG+SP V IYN +I G + +++ A
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID-GCCSKGKIEDAF 549
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
F +M++KGI + TY+ LI L +LSEA DL E+ R GL Y SL++ +
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 269 CLEGEFSKVFHLHDAIK--GFLPDFVT-----------------------RFSPSLVTYN 303
G + L++ +K G P T P L+ YN
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYN 669
Query: 304 ALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
+++ + G E+A + + M E + D +Y+++I K+G+ L+ EMN +
Sbjct: 670 GVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAR 729
Query: 364 EI 365
E+
Sbjct: 730 EM 731
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 131/290 (45%), Gaps = 11/290 (3%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
++ + + LC +G++ KGL ++ Y ++I +C + ++ A +
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIE 413
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
M +G P YN L+R +CE + A + M +G+SP V+ YN I+ G ++
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYN-ILIGGYGRK 472
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
E D + +M + G +P+ +Y LI LC +L EA + R+M G+S Y
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIY 532
Query: 262 TSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
L++ C +G+ F + KG +LVTYN LI G G+ EA
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKG--------IELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVL 369
+L ++ GL PD +Y+++IS + G L EM I+ L
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 136/314 (43%), Gaps = 32/314 (10%)
Query: 64 DVGRIREVAEKTNQKGLVS--FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
DVG+ E+ + + F I LC RM M + L TY
Sbjct: 194 DVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYN 253
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
+LI +C +K++KV M PS+ T+N L++ + V +A +L+ M D
Sbjct: 254 TLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
G PD + +I+ G + + AL V+ G+ +A T S L+ +LC E ++ +
Sbjct: 314 GFVPDAFTF-SILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPD------FVT 293
A ++ + GL E Y ++++ +C +G+ +A+ +G PD +
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432
Query: 294 RF---------------------SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSP 332
RF SPS+ TYN LI G+ F++ IL+ M + G P
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 333 DAVSYSTVISRFCK 346
+ VSY T+I+ CK
Sbjct: 493 NVVSYGTLINCLCK 506
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 47/285 (16%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y I +V K ++ + M PSV YN L+ C+ R+ +A + M
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 180 DRGLSPDVDIYNTIITW---GGDQE------------------LELDTALE--FKAKMVE 216
R L P + YNT+I G+ E + +T L+ FKA MVE
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 217 K-----------GILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
G +P A T+S L + A ++ + G+ + L+
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 266 NAFCLEGEFSKVFHL--HDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILR 323
NA C EG+ K + + KG +P+ V YN +I G+C G A +
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPN--------EVIYNTMIDGYCRKGDLVGARMKIE 413
Query: 324 GMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGV 368
M + G+ PD ++Y+ +I RFC++GE A + E+N+ +++GV
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENAEK---EVNKMKLKGV 455
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 131/323 (40%), Gaps = 36/323 (11%)
Query: 49 NKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXM 108
N + G + K +K ++E+ + +VS+ I LC ++ M
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL--INCLCKGSKLLEAQIVKRDM 520
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
+G++ R Y LI C + +++ A++ EM+ +G ++ TYN L+ ++
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 169 REAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
EA +L ++ +GL PDV YN++I+ G + + +M GI P TY
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG-NVQRCIALYEEMKRSGIKPTLKTY-H 638
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA----- 283
L++SLC + + LF EM L Y +++ + + G+ K F+L
Sbjct: 639 LLISLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS 695
Query: 284 -----------------------IKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEAL 319
++ + + R P TYN ++ GHC + + A
Sbjct: 696 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAY 755
Query: 320 GILRGMAEMGLSPDAVSYSTVIS 342
R M E G D + ++S
Sbjct: 756 VWYREMQEKGFLLDVCIGNELVS 778
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 92/237 (38%), Gaps = 42/237 (17%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
+ +G+ + T L+ ++ V +++ F PS Y K ++A +
Sbjct: 135 LRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 194
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V + + M + P V IYN
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNV----------------------------------- 219
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI LC +R+++A LF EML L Y +L++ +C G K F + + +K
Sbjct: 220 -LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKA- 277
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRF 344
PSL+T+N L+ G G E+A +L+ M ++G PDA ++S + +
Sbjct: 278 -----DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 140/306 (45%), Gaps = 30/306 (9%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ I LC M KG+ + TY+SLI C+ E A ++LS+MI+
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
R +P+V T+N L+ A+ +E ++ EA + M R + PD+ Y+++I G LD
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-GFCMHDRLD 382
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A M+ K P+ TY+ LI C +R+ E +LFREM + GL YT+L+
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 266 NAF--CLEGEFSKVFHLHDAIKGFLPDFVT---------------------------RFS 296
+ F + + +++ G P+ +T +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P++ TYN +I G C G+ E+ + ++ G+ PD + Y+T+IS FC+ G A L
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 357 MVEMNE 362
+M E
Sbjct: 563 FRKMRE 568
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 9/283 (3%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
++ + C R+ M G D T+T+LIH + +A ++ M+
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
RG P++ TY +V C+ + A +L M + +V IY+T+I E D
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE-D 277
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
AL +M KG+ P+ TYS LI LC R S+A L +M+ ++ + +L+
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRG 324
+AF EG+ + L+D + + R P + TY++LI G C R +EA +
Sbjct: 338 DAFVKEGKLVEAEKLYD-------EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
M P+ V+Y+T+I+ FCK EL EM+++ + G
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 127/269 (47%), Gaps = 13/269 (4%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+ ++ E+ +V+FNA I +G++ M ++ + D TY+SLI+ F
Sbjct: 318 LSDMIERKINPNVVTFNAL--IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C + +D+A + MI + P+V TYN L+ +C+ R+ E + R M+ RGL +
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y T+I G Q + D A +MV G+ P+ TY+ L+ LC +L +A +F
Sbjct: 436 VTYTTLI-HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 494
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNAL 305
+ R + Y ++ C G+ + L ++ KG PD ++ YN +
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD--------VIIYNTM 546
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDA 334
I G C G EEA + R M E G PD+
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 129/258 (50%), Gaps = 7/258 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M R G++ + TY LI+ FC + ++ A +L +M+ G+ PS+ T + L+ YC R
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +A ++ M + G PD + T+I G + A+ +MV++G P+ TY
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLI-HGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ LC + AF+L +M + Y++++++ C K H DA+ F
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC------KYRHEDDALNLF 283
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P+++TY++LI C R+ +A +L M E ++P+ V+++ +I F K
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 348 GEPGMAYELMVEMNEKEI 365
G+ A +L EM ++ I
Sbjct: 344 GKLVEAEKLYDEMIKRSI 361
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 9/248 (3%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y ++ H ++D A + M+ PS+ +NKL+ A + + + M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G+S ++ YN +I + ++ AL KM++ G P T S L+ C +R+
Sbjct: 113 RLGISHNLYTYNILINCFCRRS-QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPS 298
S+A L +M+ G +T+L++ L + S+ L D + V R P+
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-------VQRGCQPN 224
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
LVTY ++ G C G + A +L M + + V YSTVI CK A L
Sbjct: 225 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFT 284
Query: 359 EMNEKEIR 366
EM K +R
Sbjct: 285 EMENKGVR 292
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 7/246 (2%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
+ L+ ++ D + +M G S ++ TYN L+ +C ++ A +L M
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G P + ++++ G + A+ +MVE G P T++ LI L +
Sbjct: 148 KLGYEPSIVTLSSLLN-GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
SEA L M++ G Y ++N C G+ F+L + ++ + ++
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA------AKIEANV 260
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
V Y+ +I C ++AL + M G+ P+ ++YS++IS C A L+ +
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 360 MNEKEI 365
M E++I
Sbjct: 321 MIERKI 326
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 13/236 (5%)
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
R FS Y +++R ++ +A G+ M P + +N +++ + + D
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMK-KFD 102
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
+ KM GI + TY+ LI C ++S A L +M++ G +SL+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 266 NAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILR 323
N +C S L D + G+ PD +T+ LI+G + EA+ ++
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPD--------TITFTTLIHGLFLHNKASEAVALVD 214
Query: 324 GMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG--VLMKSCINHL 377
M + G P+ V+Y V++ CK G+ +A+ L+ +M +I V+ + I+ L
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 138/258 (53%), Gaps = 17/258 (6%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M + G D T+TSLI+ FC +++A ++++M++ G P V Y ++ + C+
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIIT--WGGDQELELDTALEFKAKMVEKGILPHADT 225
V A + M + G+ PDV +Y +++ + + D+ L M ++ I P T
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR---GMTKRKIKPDVIT 249
Query: 226 YSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG---EFSKVFHLHD 282
++ LI + E + +A +L+ EM+R ++ YTSL+N FC+EG E ++F+L +
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 283 AIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
KG PD +V Y +LI G C + ++A+ I M++ GL+ + ++Y+T+I
Sbjct: 310 T-KGCFPD--------VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Query: 343 RFCKIGEPGMAYELMVEM 360
F ++G+P +A E+ M
Sbjct: 361 GFGQVGKPNVAQEVFSHM 378
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 128/289 (44%), Gaps = 9/289 (3%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V+F T+ I C RM M G+ D YT++I C V+ A +
Sbjct: 142 IVTF--TSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
+M + G P V Y LV C R R+A +LR M R + PDV +N +I
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+ LD A E +M+ I P+ TY+ LI C E + EA +F M G
Sbjct: 260 EGKFLD-AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
AYTSL+N FC K + DA+K F + + +TY LI G +G+ A
Sbjct: 319 AYTSLINGFC------KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGV 368
+ M G+ P+ +Y+ ++ C G+ A + +M ++E+ GV
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 151/318 (47%), Gaps = 13/318 (4%)
Query: 51 VSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNR 110
V+GL N R +R + ++ + +++FNA I +G+ M R
Sbjct: 219 VNGLCN-SGRWRDADSLLRGMTKRKIKPDVITFNAL--IDAFVKEGKFLDAEELYNEMIR 275
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
+A + TYTSLI+ FC + VD+A ++ M +G P V Y L+ +C+ +V +
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A I M+ +GL+ + Y T+I G Q + + A E + MV +G+ P+ TY+ L+
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQ-GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEP---AYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LC+ ++ +A +F +M + + P Y L++ C G+ K + + ++
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK- 453
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
++TY +I G C G+ + A+ + + G+ P+ V+Y+T+IS +
Sbjct: 454 -----REMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Query: 348 GEPGMAYELMVEMNEKEI 365
G A+ L +M E +
Sbjct: 509 GLKHEAHVLFRKMKEDGV 526
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 135/281 (48%), Gaps = 4/281 (1%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T+ + LC GR M ++ + D T+ +LI F + + A ++ +EMI
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
+P++ TY L+ +C E V EA + +M +G PDV Y ++I G + ++D
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN-GFCKCKKVD 334
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A++ +M +KG+ + TY+ LI + + A ++F M+ G+ Y L+
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ C G+ K + + ++ D V +P++ TYN L++G C G+ E+AL + M
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGV---APNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ + ++Y+ +I CK G+ A L + K ++
Sbjct: 452 RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 120/277 (43%), Gaps = 30/277 (10%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
+T L+++ ++ D + + G S + T N L+ +C+ + A+ L M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G PD+ + ++I G ++ A+ +MVE GI P Y+ +I SLC +
Sbjct: 135 KLGFEPDIVTFTSLIN-GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVT---- 293
+ A LF +M G+ YTSL+N C G + L + + PD +T
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 294 -----------------------RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGL 330
+P++ TY +LI G C G +EA + M G
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 331 SPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
PD V+Y+++I+ FCK + A ++ EM++K + G
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 7/232 (3%)
Query: 129 HQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVD 188
H + ++A + + M++ PS+ + KL+ + + + + G+S D+
Sbjct: 49 HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLY 108
Query: 189 IYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFRE 248
N ++ Q + A F KM++ G P T++ LI C R+ EA + +
Sbjct: 109 TCNLLMNCFC-QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQ 167
Query: 249 MLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYG 308
M+ G+ YT+++++ C G + L D ++ + P +V Y +L+ G
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY------GIRPDVVMYTSLVNG 221
Query: 309 HCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
C GR+ +A +LRGM + + PD ++++ +I F K G+ A EL EM
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 10/252 (3%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F T+ I C +G + M KG D YTSLI+ FC ++VD A K+ E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI---ITWGGD 199
M +G + + TY L++ + + + A + M RG+ P++ YN + + + G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+ L E K G+ P+ TY+ L+ LC+ +L +A +F +M + + G
Sbjct: 403 VKKAL-MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
YT ++ C G+ +L + LP P++VTY +I G G EA
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCS----LPS--KGVKPNVVTYTTMISGLFREGLKHEAH 515
Query: 320 GILRGMAEMGLS 331
+ R M E G+S
Sbjct: 516 VLFRKMKEDGVS 527
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 194 ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
I G L+ + AL+ MVE LP ++ L+ + ++ +L + G
Sbjct: 43 ILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102
Query: 254 LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMG 313
+S LMN FC + +L + G + F P +VT+ +LI G C
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQP----YLASSFLGKMMKL--GFEPDIVTFTSLINGFCLGN 156
Query: 314 RFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG--VLMK 371
R EEA+ ++ M EMG+ PD V Y+T+I CK G A L +M IR V+
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 372 SCINHL 377
S +N L
Sbjct: 217 SLVNGL 222
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 10/294 (3%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F ++ + ++C G M + GL D YT++I +C+ DKA++
Sbjct: 374 FVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGA 433
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
++ G PS+ T L+ A + +A + R M GL DV YN ++ G +
Sbjct: 434 LLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH-GYGKTH 492
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+L+ E +M GI P TY+ LI S+ + EA ++ E++R G A+T
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
++ F G+F + F L ++ D R P +VT +AL++G+C R E+A+ +
Sbjct: 553 DVIGGFSKRGDFQEAFILW----FYMADL--RMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLMKSCINH 376
+ + GL PD V Y+T+I +C +G+ A EL+ M + RG+L +H
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ---RGMLPNESTHH 657
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 18/262 (6%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +G L+ + I +C DK +++L M G P + + + C+
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWG---GDQELELDTALEFKAKMVEKGILPHAD 224
++EA +L + G+S D +++I G E + F+ + P+
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-------PNIF 374
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA- 283
YS + ++C + A +F+E+ GL YT++++ +C G K F A
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 284 IKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
+K P PSL T LI G +A + R M GL D V+Y+ ++
Sbjct: 435 LKSGNP-------PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 344 FCKIGEPGMAYELMVEMNEKEI 365
+ K + +EL+ EM I
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGI 509
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 36/161 (22%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS---------------- 151
M G++ D TY LIH + +D+A +++SE+I RGF PS
Sbjct: 504 MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
Query: 152 -------------------VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT 192
V T + L+ YC+ R+ +A + + D GL PDV +YNT
Sbjct: 564 FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNT 623
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSL 233
+I G +++ A E MV++G+LP+ T+ L++ L
Sbjct: 624 LIH-GYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 12/240 (5%)
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
+ ++ LI + +V+ A K+ ++ G PS L++ + A +
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 177 VMADRGLSPDVDIYNTII-TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
M RG + + + I + D D E M GI P ++ I LC
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYF--DKGWELLMGMKHYGIRPDIVAFTVFIDKLCK 318
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
L EA + ++ G+S + +S+++ FC KV +AIK + F R
Sbjct: 319 AGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC------KVGKPEEAIK-LIHSF--RL 369
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
P++ Y++ + C G A I + + E+GL PD V Y+T+I +C +G A++
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+E +++ AL+ K+ + GI P + +SL E +L RE + LS G
Sbjct: 213 RERKVNMALKLTYKVDQFGIFPSRG----VCISLLKEILRVHGLELAREFVEHMLSRGRH 268
Query: 260 AYTSLMNAF----CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRF 315
++++ F C +G F K + L +K + P +V + I C G
Sbjct: 269 LNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY------GIRPDIVAFTVFIDKLCKAGFL 322
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+EA +L + G+S D+VS S+VI FCK+G+P A +L+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI 364
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 10/294 (3%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F ++ + ++C G M + GL D YT++I +C+ DKA++
Sbjct: 374 FVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGA 433
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
++ G PS+ T L+ A + +A + R M GL DV YN ++ G +
Sbjct: 434 LLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH-GYGKTH 492
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+L+ E +M GI P TY+ LI S+ + EA ++ E++R G A+T
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
++ F G+F + F L ++ D R P +VT +AL++G+C R E+A+ +
Sbjct: 553 DVIGGFSKRGDFQEAFILW----FYMADL--RMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLMKSCINH 376
+ + GL PD V Y+T+I +C +G+ A EL+ M + RG+L +H
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQ---RGMLPNESTHH 657
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 18/262 (6%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +G L+ + I +C DK +++L M G P + + + C+
Sbjct: 262 MLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGF 321
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWG---GDQELELDTALEFKAKMVEKGILPHAD 224
++EA +L + G+S D +++I G E + F+ + P+
Sbjct: 322 LKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-------PNIF 374
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA- 283
YS + ++C + A +F+E+ GL YT++++ +C G K F A
Sbjct: 375 VYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL 434
Query: 284 IKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
+K P PSL T LI G +A + R M GL D V+Y+ ++
Sbjct: 435 LKSGNP-------PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 344 FCKIGEPGMAYELMVEMNEKEI 365
+ K + +EL+ EM I
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGI 509
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 36/161 (22%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS---------------- 151
M G++ D TY LIH + +D+A +++SE+I RGF PS
Sbjct: 504 MRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD 563
Query: 152 -------------------VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT 192
V T + L+ YC+ R+ +A + + D GL PDV +YNT
Sbjct: 564 FQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNT 623
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSL 233
+I G +++ A E MV++G+LP+ T+ L++ L
Sbjct: 624 LIH-GYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 12/240 (5%)
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
+ ++ LI + +V+ A K+ ++ G PS L++ + A +
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 177 VMADRGLSPDVDIYNTII-TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
M RG + + + I + D D E M GI P ++ I LC
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYF--DKGWELLMGMKHYGIRPDIVAFTVFIDKLCK 318
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
L EA + ++ G+S + +S+++ FC KV +AIK + F R
Sbjct: 319 AGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC------KVGKPEEAIK-LIHSF--RL 369
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
P++ Y++ + C G A I + + E+GL PD V Y+T+I +C +G A++
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQ 429
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+E +++ AL+ K+ + GI P + +SL E +L RE + LS G
Sbjct: 213 RERKVNMALKLTYKVDQFGIFPSRG----VCISLLKEILRVHGLELAREFVEHMLSRGRH 268
Query: 260 AYTSLMNAF----CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRF 315
++++ F C +G F K + L +K + P +V + I C G
Sbjct: 269 LNAAVLSLFIRKYCSDGYFDKGWELLMGMKHY------GIRPDIVAFTVFIDKLCKAGFL 322
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+EA +L + G+S D+VS S+VI FCK+G+P A +L+
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI 364
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 156/325 (48%), Gaps = 11/325 (3%)
Query: 51 VSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNR 110
+ GL+ L+ + + V + + E Q +V++N+ + +C G M
Sbjct: 165 IKGLF-LEGKVSEAVVLVDRMVENGCQPDVVTYNSI--VNGICRSGDTSLALDLLRKMEE 221
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
+ + D TY+++I C +D A + EM +G SV TYN LVR C+ + +
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A +L+ M R + P+V +N ++ +E +L A E +M+ +GI P+ TY+ L+
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFV-KEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
C + RLSEA ++ M+R S +TSL+ +C+ V + D +K F
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM------VKRVDDGMKVFRNI 394
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
+ VTY+ L+ G C G+ + A + + M G+ PD ++Y ++ C G+
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 351 GMAYELMVEMNEKEIR-GVLMKSCI 374
A E+ ++ + ++ G++M + I
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTI 479
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 148/298 (49%), Gaps = 9/298 (3%)
Query: 65 VGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLI 124
+ +E+ K + +V++N+ ++ LC G+ M + + + T+ L+
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSL--VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 125 HMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLS 184
+F + ++ +A ++ EMI RG SP++ TYN L+ YC ++R+ EA +L +M S
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 185 PDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFD 244
PD+ + ++I G +D ++ + ++G++ +A TYS L+ C ++ A +
Sbjct: 366 PDIVTFTSLIK-GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 245 LFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNA 304
LF+EM+ G+ Y L++ C G+ K + + ++ ++ +V Y
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK------SKMDLGIVMYTT 478
Query: 305 LIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
+I G C G+ E+A + + G+ P+ ++Y+ +IS CK G A L+ +M E
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 150/311 (48%), Gaps = 19/311 (6%)
Query: 52 SGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRK 111
+G WN A KD+ RE+ +++FN + +G++ M +
Sbjct: 276 AGKWNDGALLLKDMVS-REIVP-----NVITFNVLLDV--FVKEGKLQEANELYKEMITR 327
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G++ + TY +L+ +C Q + +A +L M+ SP + T+ L++ YC RV +
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+ R ++ RGL + Y +I+ G Q ++ A E +MV G+LP TY L+
Sbjct: 388 MKVFRNISKRGLVANAVTY-SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLP 289
LC +L +A ++F ++ + + G YT+++ C G+ ++L ++ KG
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV-- 504
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
P+++TY +I G C G EA +LR M E G +P+ +Y+T+I + G+
Sbjct: 505 ------KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 350 PGMAYELMVEM 360
+ +L+ EM
Sbjct: 559 LTASAKLIEEM 569
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 137/316 (43%), Gaps = 71/316 (22%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+A + T +I+ FC + AY VL +++ G+ P T+N L++ E +V EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 172 AGILRVMADRGLSPDVDIYNTI---ITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
++ M + G PDV YN+I I GD L AL+ KM E+ + TYS
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL----ALDLLRKMEERNVKADVFTYST 233
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE--------------- 273
+I SLC + + A LF+EM G+ + Y SL+ C G+
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 274 --------------FSKVFHLHDA--------IKGFLPDFVT------------------ 293
F K L +A +G P+ +T
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 294 ---------RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRF 344
+ SP +VT+ +LI G+C + R ++ + + R +++ GL +AV+YS ++ F
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 345 CKIGEPGMAYELMVEM 360
C+ G+ +A EL EM
Sbjct: 414 CQSGKIKLAEELFQEM 429
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 136/300 (45%), Gaps = 12/300 (4%)
Query: 73 EKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEE 132
E+ N K V F + I LC G + M KG+ TY SL+ C +
Sbjct: 220 EERNVKADV-FTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 133 VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT 192
+ +L +M+ R P+V T+N L+ + +E +++EA + + M RG+SP++ YNT
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
++ G + L A MV P T++ LI C +R+ + +FR + +
Sbjct: 339 LMD-GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHC 310
GL Y+ L+ FC G+ L + G LPD ++TY L+ G C
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD--------VMTYGILLDGLC 449
Query: 311 CMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLM 370
G+ E+AL I + + + V Y+T+I CK G+ A+ L + K ++ +M
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 5/213 (2%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V+F T+ I+ C R+ ++++GL + TY+ L+ FC ++ A ++
Sbjct: 368 IVTF--TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
EM+ G P V TY L+ C+ ++ +A I + + + +Y TII G
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE-GMC 484
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+ +++ A + KG+ P+ TY+ +I LC + LSEA L R+M G + +
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPD 290
Y +L+ A +G+ + L + +K GF D
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
G +++ D A+ +M+ LP +S ++ ++ + D +++ G++
Sbjct: 62 SGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE 316
++N FC K + + + + P T+N LI G G+
Sbjct: 122 NIYTLNIMINCFC---RCCKTCFAYSVLGKVMK---LGYEPDTTTFNTLIKGLFLEGKVS 175
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
EA+ ++ M E G PD V+Y+++++ C+ G+ +A +L+ +M E+ ++
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 3/188 (1%)
Query: 70 EVAEKTNQKGLVSFNATATI--QDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+V +++GLV+ T +I Q C G++ M G+ D TY L+
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C +++KA ++ ++ + Y ++ C+ +V +A + + +G+ P+V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y +I+ G ++ L A KM E G P+ TY+ LI + + L+ + L
Sbjct: 509 MTYTVMIS-GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 567
Query: 248 EMLRGGLS 255
EM G S
Sbjct: 568 EMKSCGFS 575
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 141/288 (48%), Gaps = 11/288 (3%)
Query: 77 QKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
+ +V FN I LC + M KG+ + TY SLI+ C+ A
Sbjct: 255 KANVVIFNTI--IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW 196
++LS M+++ +P+V T+N L+ A+ +E ++ EA + M R + PD YN +I
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN- 371
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
G LD A + MV K LP+ TY+ LI C +R+ + +LFREM + GL
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS-LVTYNALIYGHCCMGRF 315
YT+++ F G+ D+ + V+ P+ ++TY+ L++G C G+
Sbjct: 432 NTVTYTTIIQGFFQAGDC-------DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
+ AL I + + + + + Y+T+I CK G+ G A++L ++ K
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK 532
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 131/308 (42%), Gaps = 30/308 (9%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I C + ++ M + G D T +SL++ +CH + + A ++ +M++ G+
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P T+ L+ ++ EA ++ M RG PD+ Y T++ G + ++D AL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN-GLCKRGDIDLAL 243
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
KM I + ++ +I SLC R + A DLF EM G+ Y SL+N
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 269 CLEGEFSKVFHLHDAI--KGFLPDFVT---------------------------RFSPSL 299
C G +S L + K P+ VT P
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
+TYN LI G C R +EA + + M P+ +Y+T+I+ FCK EL E
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 360 MNEKEIRG 367
M+++ + G
Sbjct: 424 MSQRGLVG 431
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 126/258 (48%), Gaps = 7/258 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G++ D TY+ I+ FC + ++ A VL++M+ G+ P + T + L+ YC R
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +A ++ M + G PD + T+I G + A+ +MV++G P TY
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLI-HGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ LC + A +L +M + + +++++ C K H+ A+ F
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC------KYRHVEVAVDLF 281
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P++VTYN+LI C GR+ +A +L M E ++P+ V+++ +I F K
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 348 GEPGMAYELMVEMNEKEI 365
G+ A +L EM ++ I
Sbjct: 342 GKLVEAEKLHEEMIQRSI 359
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 12/295 (4%)
Query: 73 EKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEE 132
EK +V+FNA I +G++ M ++ + D TY LI+ FC
Sbjct: 321 EKKINPNVVTFNAL--IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 133 VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT 192
+D+A ++ M+ + P++ TYN L+ +C+ RV + + R M+ RGL + Y T
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
II G Q + D+A +MV + TYS L+ LC +L A +F+ + +
Sbjct: 439 IIQ-GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM 312
+ Y +++ C G+ + + L ++ P +VTYN +I G C
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---------IKPDVVTYNTMISGLCSK 548
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
+EA + R M E G P++ +Y+T+I + + + EL+ EM G
Sbjct: 549 RLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVG 603
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 9/294 (3%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
+F T I L + M ++G D TY ++++ C + ++D A +L+
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
+M +V +N ++ + C+ V A + M +G+ P+V YN++I +
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
D A + M+EK I P+ T++ LI + E +L EA L EM++ + Y
Sbjct: 308 RWSD-ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS-PSLVTYNALIYGHCCMGRFEEALG 320
L+N FC+ D K V++ P++ TYN LI G C R E+ +
Sbjct: 367 NLLINGFCMHNRL-------DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLMKSCI 374
+ R M++ GL + V+Y+T+I F + G+ A + +M + +M I
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 13/250 (5%)
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
+VD A + +M+ PS+ +NKL+ A + ++ + M G+S D+ Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
I + +L AL AKM++ G P T S L+ C +R+S+A L +M+
Sbjct: 123 IFINCFCRRS-QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGH 309
G +T+L++ L + S+ L D + +G PD LVTY ++ G
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD--------LVTYGTVVNGL 233
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG-- 367
C G + AL +L M + + V ++T+I CK +A +L EM K IR
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 368 VLMKSCINHL 377
V S IN L
Sbjct: 294 VTYNSLINCL 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 7/224 (3%)
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
+M G S + TY+ + +C ++ A +L M G PD+ ++++ G
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN-GYCHS 166
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
+ A+ +MVE G P T++ LI L + SEA L +M++ G Y
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGI 321
+++N C G+ +L + ++ R ++V +N +I C E A+ +
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEA------ARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 322 LRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
M G+ P+ V+Y+++I+ C G A L+ M EK+I
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 104/262 (39%), Gaps = 46/262 (17%)
Query: 147 GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDT 206
G P+V ++ L + C E A+G R + LS DI +++D
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLS---DI------------IKVDD 66
Query: 207 ALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMN 266
A++ MV+ P ++ L+ ++ + L +M G+S Y+ +N
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 267 AFCLEGEFSKVFH-LHDAIK-GFLPDFVTR---------------------------FSP 297
FC + S L +K G+ PD VT + P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
T+ LI+G + EA+ ++ M + G PD V+Y TV++ CK G+ +A L+
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 358 VEMNEKEIRG--VLMKSCINHL 377
+M I+ V+ + I+ L
Sbjct: 247 NKMEAARIKANVVIFNTIIDSL 268
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 137/284 (48%), Gaps = 13/284 (4%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I LC + M+ KG+ + TY SLI C+ A ++LS+MI+
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
R +P+V T++ L+ A+ +E ++ EA + M R + PD+ Y+++I G LD
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN-GFCMHDRLD 377
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A M+ K P+ TY+ LI C +R+ E +LFREM + GL Y +L+
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 266 NAFCLEGE---FSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
G+ K+F K + D V P ++TY+ L+ G C G+ E+AL +
Sbjct: 438 QGLFQAGDCDMAQKIF------KKMVSDGV---PPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ + + PD +Y+ +I CK G+ ++L ++ K ++
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 145/308 (47%), Gaps = 15/308 (4%)
Query: 53 GLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKG 112
G W+ +R D+ E+ +V+F +A I +G++ M ++
Sbjct: 304 GRWSDASRLLSDM------IERKINPNVVTF--SALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
+ D TY+SLI+ FC + +D+A + MI + P+V TYN L++ +C+ RV E
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
+ R M+ RGL + YNT+I G Q + D A + KMV G+ P TYS L+
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQ-GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
LC +L +A +F + + + Y ++ C G+ + D F +
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK------VEDGWDLFCSLSL 528
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
P+++ Y +I G C G EEA + R M E G P++ +Y+T+I + G+
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 588
Query: 353 AYELMVEM 360
+ EL+ EM
Sbjct: 589 SAELIKEM 596
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 14/283 (4%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
L S+N I C + ++ M + G D T +SL++ +CH + + +A +
Sbjct: 115 LYSYNIL--INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
+ +M + P+ T+N L+ ++ EA ++ M RG PD+ Y T++ G
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN-GLC 231
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+ ++D AL KM + I Y+ +I +LC + +++A +LF EM G+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEA 318
Y SL+ C G +S L L D + R +P++VT++ALI G+ EA
Sbjct: 292 TYNSLIRCLCNYGRWSDASRL-------LSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFC---KIGEPGMAYELMV 358
+ M + + PD +YS++I+ FC ++ E +ELM+
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 9/250 (3%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
T+ +LIH + +A ++ M+ RG P + TY +V C+ + A +L+ M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+ DV IY TII + + ++ AL +M KGI P+ TY+ LI LC R
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYK-NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSP 297
S+A L +M+ ++ +++L++AF EG+ + L+D + + R P
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD-------EMIKRSIDP 358
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+ TY++LI G C R +EA + M P+ V+Y+T+I FCK EL
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 358 VEMNEKEIRG 367
EM+++ + G
Sbjct: 419 REMSQRGLVG 428
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 125/253 (49%), Gaps = 7/253 (2%)
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
++ D +Y LI+ FC + ++ A VL +M+ G+ P + T + L+ YC R+ EA
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
++ M P+ +NT+I G + A+ +MV +G P TY ++
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLI-HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
LC + A L ++M +G + YT++++A C +++DA+ F
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC------NYKNVNDALNLFTEMDN 283
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
P++VTYN+LI C GR+ +A +L M E ++P+ V++S +I F K G+
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 353 AYELMVEMNEKEI 365
A +L EM ++ I
Sbjct: 344 AEKLYDEMIKRSI 356
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 14/227 (6%)
Query: 146 RGFSPSVATYN---KLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
RG S A+Y+ KL R + ++ +A + M P + +N +++
Sbjct: 36 RGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMN- 94
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR--LSEAFDLFREMLRGGLSTGEPA 260
+ D + +M + + D YS+ I+ CF RR L A + +M++ G
Sbjct: 95 KFDLVISLGERM--QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT 152
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
+SL+N +C S+ L D + FV + P+ VT+N LI+G + EA+
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQM------FVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
++ M G PD +Y TV++ CK G+ +A L+ +M + +I
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 132/275 (48%), Gaps = 13/275 (4%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I LC KG + M KG ++ TY +LIH C + ++DKA +L M+
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P+ TY L+ ++ R +A +L M +RG + IY+ +I+ G +E + + A+
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS-GLFKEGKAEEAM 382
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
KM EKG P+ YS L+ LC E + +EA ++ M+ G Y+SLM F
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 269 CLEG---EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
G E +V+ D T S + Y+ LI G C +GR +EA+ + M
Sbjct: 443 FKTGLCEEAVQVWKEMDK---------TGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
+G+ PD V+YS++I C IG A +L EM
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 137/302 (45%), Gaps = 12/302 (3%)
Query: 64 DVGRIREVAEKTNQKGLVSFNAT--ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
D+ R+ ++ + KG V T I LC KG++ M + TY
Sbjct: 272 DLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYG 331
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
+LI+ Q A ++LS M +RG+ + Y+ L+ +E + EA + R MA++
Sbjct: 332 TLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK 391
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
G P++ +Y+ ++ G +E + + A E +M+ G LP+A TYS L+ E
Sbjct: 392 GCKPNIVVYSVLVD-GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEE 450
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVT 301
A +++EM + G S + Y+ L++ C G + +A+ + P V
Sbjct: 451 AVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG------RVKEAMMVWSKMLTIGIKPDTVA 504
Query: 302 YNALIYGHCCMGRFEEALGILRGM---AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
Y+++I G C +G + AL + M E PD V+Y+ ++ C + A +L+
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLN 564
Query: 359 EM 360
M
Sbjct: 565 SM 566
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 119/249 (47%), Gaps = 11/249 (4%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D TY +L+ C +E +D+A +L EM G SPS YN L+ C++ + ++
Sbjct: 221 DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLV 280
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
M +G P+ YNT+I G + +LD A+ +MV +P+ TY LI L
Sbjct: 281 DNMFLKGCVPNEVTYNTLI-HGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL--HDAIKGFLPDFVT 293
+RR ++A L M G + Y+ L++ EG+ + L A KG
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG------- 392
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
P++V Y+ L+ G C G+ EA IL M G P+A +YS+++ F K G A
Sbjct: 393 -CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Query: 354 YELMVEMNE 362
++ EM++
Sbjct: 452 VQVWKEMDK 460
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEM-------IDRGF-------------SPSVAT 154
L T +S+I + + + D K+LS + I+R F +V
Sbjct: 75 LGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDL 134
Query: 155 YNKLVRAYCEEDRVREAAGILRVMADRGL-SPDVDIYNTIITWGGDQELE---------- 203
++++V + + V+ +L V+ + GL ++ Y+ ++ + +
Sbjct: 135 FHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVI 194
Query: 204 --------LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS 255
+D A+E M E+ LP TY L+ LC E R+ EA L EM G S
Sbjct: 195 KALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCS 254
Query: 256 TGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRF 315
Y L++ C +G+ ++V L D + F+ P+ VTYN LI+G C G+
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNM------FLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
++A+ +L M P+ V+Y T+I+ K A L+ M E+
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 42/257 (16%)
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGG 198
V++ ++ SP+ ++N +++A C+ V A + R M +R PD Y T++ G
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMD-GL 232
Query: 199 DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE 258
+E +D A+ +M +G P Y+ LI LC + L+ L M G E
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 259 PAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM------ 312
Y +L++ CL+G+ K L + + ++ P+ VTY LI G
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERM------VSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 313 -----------------------------GRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
G+ EEA+ + R MAE G P+ V YS ++
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 344 FCKIGEPGMAYELMVEM 360
C+ G+P A E++ M
Sbjct: 407 LCREGKPNEAKEILNRM 423
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 23/185 (12%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F + I LCG GR+ M G+ D Y+S+I C +D A K+ E
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 143 MI---DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
M+ + P V TYN L+ C + + A +L M DRG PDV NT + +
Sbjct: 528 MLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Query: 200 QELELDTALEFKAK--------------------MVEKGILPHADTYSWLIVSLCFERRL 239
+ D F + M+ K + P T++ ++ +C +++
Sbjct: 588 KSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKI 647
Query: 240 SEAFD 244
+ A D
Sbjct: 648 NAAID 652
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 132/256 (51%), Gaps = 7/256 (2%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G++ D ++T+LI FC + A L +M+ GF PS+ T+ LV +C +R EA
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
++ + G P+V IYNTII ++ +++TAL+ M + GI P TY+ LI
Sbjct: 169 MSLVDQIVGLGYEPNVVIYNTIIDSLCEKG-QVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
L + + +M+R G+S +++L++ + EG+ L +A K +
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQ------LLEAKKQYNEMI 281
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
+P++VTYN+LI G C G +EA +L + G P+AV+Y+T+I+ +CK
Sbjct: 282 QRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVD 341
Query: 352 MAYELMVEMNEKEIRG 367
+++ M+ + G
Sbjct: 342 DGMKILCVMSRDGVDG 357
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 23/286 (8%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
++ T I C R+ M + G T+ SL++ FCH +A ++ +
Sbjct: 115 YSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQ 174
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-------T 195
++ G+ P+V YN ++ + CE+ +V A +L+ M G+ PDV YN++I T
Sbjct: 175 IVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGT 234
Query: 196 WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS 255
WG + D M+ GI P T+S LI E +L EA + EM++ ++
Sbjct: 235 WGVSARILSD--------MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 256 TGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGR 314
Y SL+N C+ G L D K L V++ F P+ VTYN LI G+C R
Sbjct: 287 PNIVTYNSLINGLCIHG-------LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKR 339
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
++ + IL M+ G+ D +Y+T+ +C+ G+ A +++ M
Sbjct: 340 VDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 9/278 (3%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I LC KG++ M + G+ D TY SLI H + ++LS+M+ G
Sbjct: 191 IDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGI 250
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
SP V T++ L+ Y +E ++ EA M R ++P++ YN++I L LD A
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL-LDEAK 309
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+ +V KG P+A TY+ LI C +R+ + + M R G+ Y +L +
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVT-RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAE 327
C G+FS A + L V+ P + T+N L+ G C G+ +AL L + +
Sbjct: 370 CQAGKFS-------AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 328 MGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
++Y+ +I CK + A+ L + K +
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGV 460
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 8/192 (4%)
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
LR+ R S D + + G ++ + AL M E LP +S L++++
Sbjct: 33 LRICNSRAFSGRSDYRERLRS--GLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIA 90
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
+ LFR + G+S ++T+L++ FC + L A+
Sbjct: 91 KLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFC------RCARLSLALSCLGKMMKLG 144
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
F PS+VT+ +L+ G C + RF EA+ ++ + +G P+ V Y+T+I C+ G+ A
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 355 ELMVEMNEKEIR 366
+++ M + IR
Sbjct: 205 DVLKHMKKMGIR 216
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 46/234 (19%)
Query: 129 HQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVD 188
H + + A + +M + PS+ +++L+ A + ++ + R + G+S D+
Sbjct: 56 HSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLY 115
Query: 189 IYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER--RLSEAFDLF 246
+ T+I CF R RLS A
Sbjct: 116 SFTTLID--------------------------------------CFCRCARLSLALSCL 137
Query: 247 REMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALI 306
+M++ G + SL+N FC F + L D I G + P++V YN +I
Sbjct: 138 GKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL------GYEPNVVIYNTII 191
Query: 307 YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
C G+ AL +L+ M +MG+ PD V+Y+++I+R G G++ ++ +M
Sbjct: 192 DSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 3/196 (1%)
Query: 70 EVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCH 129
E+ +++ +V++N+ I LC G + + KG + TY +LI+ +C
Sbjct: 279 EMIQRSVNPNIVTYNSL--INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCK 336
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+ VD K+L M G TYN L + YC+ + A +L M G+ PD+
Sbjct: 337 AKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYT 396
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
+N ++ D ++ AL + + + TY+ +I LC ++ +A+ LF +
Sbjct: 397 FNILLDGLCDHG-KIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSL 455
Query: 250 LRGGLSTGEPAYTSLM 265
G+S Y ++M
Sbjct: 456 ALKGVSPDVITYITMM 471
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 144/300 (48%), Gaps = 11/300 (3%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+R++ E+ + V + + I LC G + M KG+ + TY LI F
Sbjct: 251 LRKMEERNIKLDAVKY--SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C+ D K+L +MI R +P+V T++ L+ ++ +E ++REA + + M RG++PD
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y ++I G +E LD A + MV KG P+ T++ LI C R+ + +LFR
Sbjct: 369 ITYTSLID-GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALI 306
+M G+ Y +L+ FC G+ + K + V+R P++VTY L+
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKL-------NVAKELFQEMVSRKVPPNIVTYKILL 480
Query: 307 YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
G C G E+AL I + + + D Y+ +I C + A++L + K ++
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 163/344 (47%), Gaps = 29/344 (8%)
Query: 18 LRVKTILRNRLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQ 77
+ +K I N ++ ++I GF AG W+ A+ +R++ ++
Sbjct: 289 MEMKGITTN-IITYNILIGGFCNAGR-----------WDDGAKL------LRDMIKRKIN 330
Query: 78 KGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAY 137
+V+F + I +G++ M +G+A D TYTSLI FC + +DKA
Sbjct: 331 PNVVTF--SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 138 KVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWG 197
+++ M+ +G P++ T+N L+ YC+ +R+ + + R M+ RG+ D YNT+I
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ-- 446
Query: 198 GDQEL-ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
G EL +L+ A E +MV + + P+ TY L+ LC +A ++F ++ + +
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE 316
Y +++ C SKV DA F + P + TYN +I G C G
Sbjct: 507 DIGIYNIIIHGMC---NASKV---DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLS 560
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
EA + R M E G +PD +Y+ +I G+ + +L+ E+
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 132/262 (50%), Gaps = 15/262 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M KG+A + T + +I+ FC ++ A+ + ++I G+ P+ T++ L+ C E R
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITW----GGDQELELDTALEFKAKMVEKGILPHA 223
V EA ++ M + G PD+ NT++ G + E A+ KMVE G P+A
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE-----AMLLIDKMVEYGCQPNA 228
Query: 224 DTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA 283
TY ++ +C + + A +L R+M + Y+ +++ C G F+L +
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 284 IKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
++ + + +++TYN LI G C GR+++ +LR M + ++P+ V++S +I
Sbjct: 289 ME------MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 344 FCKIGEPGMAYELMVEMNEKEI 365
F K G+ A EL EM + I
Sbjct: 343 FVKEGKLREAEELHKEMIHRGI 364
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 30/309 (9%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ I LC +GR+ M G D T +L++ C + +A ++ +M++
Sbjct: 162 STLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G P+ TY ++ C+ + A +LR M +R + D Y+ II G + LD
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID-GLCKHGSLD 280
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A +M KGI + TY+ LI C R + L R+M++ ++ ++ L+
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 266 NAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFS--------------------------- 296
++F EG+ + LH + +G PD +T S
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P++ T+N LI G+C R ++ L + R M+ G+ D V+Y+T+I FC++G+ +A EL
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 357 MVEMNEKEI 365
EM +++
Sbjct: 461 FQEMVSRKV 469
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 129/289 (44%), Gaps = 9/289 (3%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
I ++ E Q V++ + +C G+ M + + LD Y+ +I
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNV--MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C +D A+ + +EM +G + ++ TYN L+ +C R + A +LR M R ++P+V
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
++ +I +E +L A E +M+ +GI P TY+ LI C E L +A +
Sbjct: 334 VTFSVLID-SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIY 307
M+ G + L+N +C K + D ++ F + VTYN LI
Sbjct: 393 LMVSKGCDPNIRTFNILINGYC------KANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 308 GHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
G C +G+ A + + M + P+ V+Y ++ C GE A E+
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 140 LSEMIDRGFSP---SVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW 196
LS +RGFS +Y + +R+ + + +A + R M P V ++ + +
Sbjct: 38 LSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSA 97
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
+ + D L +M KGI + T S +I C R+L AF ++++ G
Sbjct: 98 IAKTK-QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEP 156
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE 316
+++L+N CLEG S+ L D + P L+T N L+ G C G+
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRM------VEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
EA+ ++ M E G P+AV+Y V++ CK G+ +A EL+ +M E+ I+
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 3/207 (1%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I C R+ M+ +G+ D TY +LI FC +++ A ++ EM+ R
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P++ TY L+ C+ +A I + + D+ IYN II G ++D A
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII-HGMCNASKVDDAW 528
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+ + KG+ P TY+ +I LC + LSEA LFR+M G + Y L+ A
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588
Query: 269 CLEGEFSKVFHLHDAIK--GFLPDFVT 293
+G+ +K L + +K GF D T
Sbjct: 589 LGDGDATKSVKLIEELKRCGFSVDAST 615
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 133/298 (44%), Gaps = 31/298 (10%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I+ LCG G+ M+ G D TY +LI FC E++KA ++ ++
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 149 -SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTA 207
SP V TY ++ YC+ ++REA+ +L M G+ P +N ++ G + E+ TA
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD-GYAKAGEMLTA 331
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
E + KM+ G P T++ LI C ++S+ F L+ EM G+ Y+ L+NA
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 268 FCLEGEFSKV----------------FHLHDAIKGFL-------PDFVT------RFSPS 298
C E K F + I GF + + + P
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
+T+ LI GHC GR EA+ I M +G SPD ++ S+++S K G AY L
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
SL++ + V+ A K+ E + T+N L+R C + +A +L VM+
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 181 RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGIL--PHADTYSWLIVSLCFERR 238
G PD+ YNT+I G + EL+ A E K V+ G + P TY+ +I C +
Sbjct: 235 FGCEPDIVTYNTLIQ-GFCKSNELNKASEM-FKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
+ EA L +MLR G+ + L++ + GE + I+G + F P
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFGC--FPD 346
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
+VT+ +LI G+C +G+ + + M G+ P+A +YS +I+ C A EL+
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 359 EMNEKEI 365
++ K+I
Sbjct: 407 QLASKDI 413
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 3/202 (1%)
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
V+FN + G M M G D T+TSLI +C +V + +++
Sbjct: 313 VTFNVL--VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
EM RG P+ TY+ L+ A C E+R+ +A +L +A + + P +YN +I G +
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID-GFCK 429
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
+++ A +M +K P T++ LI+ C + R+ EA +F +M+ G S +
Sbjct: 430 AGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Query: 261 YTSLMNAFCLEGEFSKVFHLHD 282
+SL++ G + +HL+
Sbjct: 490 VSSLLSCLLKAGMAKEAYHLNQ 511
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 151 SVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ-ELELDTALE 209
S TYN L R+ C+ A + M G+SP+ + +++ ++ +L TAL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 210 FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC 269
++ VE + + L+ +L R+ +A LF E LR + L+ C
Sbjct: 162 LQSFEVEGCCM----VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 270 LEGEFSKVFHLHDAIKGF--LPDFVTR----------------------------FSPSL 299
G+ K L + GF PD VT SP +
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
VTY ++I G+C G+ EA +L M +G+ P V+++ ++ + K GE A E+ +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 360 M 360
M
Sbjct: 338 M 338
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T+ I C G++ MN +G+ + TY+ LI+ C++ + KA ++L ++
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
+ P YN ++ +C+ +V EA I+ M + PD I TI+ G + +
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD-KITFTILIIGHCMKGRMF 469
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A+ KMV G P T S L+ L EA+ L + +G + P T
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTA 529
Query: 266 NA 267
NA
Sbjct: 530 NA 531
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 133/298 (44%), Gaps = 31/298 (10%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I+ LCG G+ M+ G D TY +LI FC E++KA ++ ++
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 149 -SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTA 207
SP V TY ++ YC+ ++REA+ +L M G+ P +N ++ G + E+ TA
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD-GYAKAGEMLTA 331
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
E + KM+ G P T++ LI C ++S+ F L+ EM G+ Y+ L+NA
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 268 FCLEGEFSKV----------------FHLHDAIKGFL-------PDFVT------RFSPS 298
C E K F + I GF + + + P
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
+T+ LI GHC GR EA+ I M +G SPD ++ S+++S K G AY L
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
SL++ + V+ A K+ E + T+N L+R C + +A +L VM+
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 181 RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGIL--PHADTYSWLIVSLCFERR 238
G PD+ YNT+I G + EL+ A E K V+ G + P TY+ +I C +
Sbjct: 235 FGCEPDIVTYNTLIQ-GFCKSNELNKASEM-FKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
+ EA L +MLR G+ + L++ + GE + I+G + F P
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFGC--FPD 346
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
+VT+ +LI G+C +G+ + + M G+ P+A +YS +I+ C A EL+
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 359 EMNEKEI 365
++ K+I
Sbjct: 407 QLASKDI 413
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 3/202 (1%)
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
V+FN + G M M G D T+TSLI +C +V + +++
Sbjct: 313 VTFNVL--VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLW 370
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
EM RG P+ TY+ L+ A C E+R+ +A +L +A + + P +YN +I G +
Sbjct: 371 EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID-GFCK 429
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
+++ A +M +K P T++ LI+ C + R+ EA +F +M+ G S +
Sbjct: 430 AGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Query: 261 YTSLMNAFCLEGEFSKVFHLHD 282
+SL++ G + +HL+
Sbjct: 490 VSSLLSCLLKAGMAKEAYHLNQ 511
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 151 SVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ-ELELDTALE 209
S TYN L R+ C+ A + M G+SP+ + +++ ++ +L TAL
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 210 FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC 269
++ VE + + L+ +L R+ +A LF E LR + L+ C
Sbjct: 162 LQSFEVEGCCM----VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 270 LEGEFSKVFHLHDAIKGF--LPDFVTR----------------------------FSPSL 299
G+ K L + GF PD VT SP +
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
VTY ++I G+C G+ EA +L M +G+ P V+++ ++ + K GE A E+ +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 360 M 360
M
Sbjct: 338 M 338
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T+ I C G++ MN +G+ + TY+ LI+ C++ + KA ++L ++
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
+ P YN ++ +C+ +V EA I+ M + PD I TI+ G + +
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD-KITFTILIIGHCMKGRMF 469
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A+ KMV G P T S L+ L EA+ L + +G + P T
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETKTA 529
Query: 266 NA 267
NA
Sbjct: 530 NA 531
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 146/309 (47%), Gaps = 13/309 (4%)
Query: 62 EKDVGRIREVAEKTNQKGLV--SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
E D+ + E ++ +KG+V +++ I LC G+ +++ L++
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
YT L+H FC + ++++A V EM+ RG + Y L+ + + G+L+ M
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
DRGL PD IY ++I + + A M+ +G +P+ TY+ +I LC +
Sbjct: 675 DRGLKPDDVIYTSMID-AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCL-EGEFSKVFHLHDAI-KGFLPDFVTRFSP 297
+EA L +M + Y ++ E + K LH+AI KG L +
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLAN------- 786
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
TYN LI G C GR EEA ++ M G+SPD ++Y+T+I+ C+ + A EL
Sbjct: 787 -TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 358 VEMNEKEIR 366
M EK IR
Sbjct: 846 NSMTEKGIR 854
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 152/337 (45%), Gaps = 20/337 (5%)
Query: 48 SNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXX 107
S+ V GL + + E+ + ++ V + L +NA I LC +
Sbjct: 336 SSLVEGLRK-RGKIEEALNLVKRVVDFGVSPNLFVYNAL--IDSLCKGRKFHEAELLFDR 392
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M + GL + TY+ LI MFC + ++D A L EM+D G SV YN L+ +C+
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ A G + M ++ L P V Y +++ G + +++ AL +M KGI P T++
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMG-GYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--K 285
L+ L + +A LF EM + Y ++ +C EG+ SK F + K
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
G +PD +Y LI+G C G+ EA + G+ + + + Y+ ++ FC
Sbjct: 572 GIVPD--------TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 346 KIGEPGMAYELMVEMNEKEIR------GVLMKSCINH 376
+ G+ A + EM ++ + GVL+ + H
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 154/343 (44%), Gaps = 50/343 (14%)
Query: 63 KDVGRIREVAEKTNQKG----LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQR 118
KD+ R +E+ G +V +N I LC K ++ + K L D
Sbjct: 241 KDLSRAKEMIAHMEATGCDVNIVPYNVL--IDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY +L++ C +E + +++ EM+ FSPS A + LV + ++ EA +++ +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
D G+SP++ +YN +I + L F +M + G+ P+ TYS LI C +
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD-RMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVT-RFSP 297
L A EM+ GL Y SL+N C G+ S A +GF+ + + + P
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS-------AAEGFMAEMINKKLEP 470
Query: 298 SLVTYNALIYGHCCMGRFEEAL-----------------------GILRG---------- 324
++VTY +L+ G+C G+ +AL G+ R
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 325 --MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
MAE + P+ V+Y+ +I +C+ G+ A+E + EM EK I
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 44/290 (15%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ D YT +I C +++ +A ++++ M G ++ YN L+ C++ +V EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 172 AGILRVMADRGLSPDVDIYNTIITWG--GDQELE-------------------------- 203
GI + +A + L PDV Y T++ +G QE E
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLV-YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE 340
Query: 204 -------LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
++ AL ++V+ G+ P+ Y+ LI SLC R+ EA LF M + GL
Sbjct: 341 GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP 400
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV-TRFSPSLVTYNALIYGHCCMGRF 315
+ Y+ L++ FC G+ D FL + V T S+ YN+LI GHC G
Sbjct: 401 NDVTYSILIDMFCRRGKL-------DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
A G + M L P V+Y++++ +C G+ A L EM K I
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 7/243 (2%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
RT ++L+H A ++ ++M+ G P V Y ++R+ CE + A ++
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M G ++ YN +I G ++ ++ A+ K + K + P TY L+ LC +
Sbjct: 253 MEATGCDVNIVPYNVLID-GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
++ EML S E A +SL+ G+ + +L + F SP
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF------GVSP 365
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+L YNALI C +F EA + M ++GL P+ V+YS +I FC+ G+ A +
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 358 VEM 360
EM
Sbjct: 426 GEM 428
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 11/237 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M+ +GL D YTS+I + +A+ + MI+ G P+ TY ++ C+
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V EA + M P+ Y + E+++ A+E ++ KG+L + TY+
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYN 791
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--K 285
LI C + R+ EA +L M+ G+S YT+++N C + K L +++ K
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
G PD V YN LI+G C G +A + M GL P+ + T S
Sbjct: 852 GIRPD--------RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV-LSEMI 144
TA I LC G + M +Q TY + + + EVD V L I
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT-KGEVDMQKAVELHNAI 779
Query: 145 DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
+G + ATYN L+R +C + R+ EA+ ++ M G+SPD Y T+I + ++
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN-DV 838
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
A+E M EKGI P Y+ LI C + +A +L EMLR GL
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 144 IDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELE 203
+ RGF S A++ L+ A + + A+ +L+ + R L P D++N + + +L
Sbjct: 96 LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPS-DVFNVLFSCYEKCKLS 154
Query: 204 ------------------LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDL 245
LD L FK + + +LP T S L+ L R A +L
Sbjct: 155 SSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMEL 214
Query: 246 FREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNAL 305
F +M+ G+ YT ++ + C + S+ + ++ T ++V YN L
Sbjct: 215 FNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA------TGCDVNIVPYNVL 268
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
I G C + EA+GI + +A L PD V+Y T++ CK+ E + E+M EM
Sbjct: 269 IDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 78 KGLVSFNATAT--IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDK 135
KGL++ AT I+ C +GR+ M G++ D TYT++I+ C + +V K
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 136 AYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD 186
A ++ + M ++G P YN L+ C + +A + M +GL P+
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 126/280 (45%), Gaps = 7/280 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I LC G+ KG +D RT +L+H C ++D+A+++ E++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
RG +YN L+ C + ++ EA L M RGL PD Y +I+ G +++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY-SILICGLFNMNKVE 592
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A++F G+LP TYS +I C R E + F EM+ + Y L+
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
A+C G S L + +K SP+ TY +LI G + R EEA + M
Sbjct: 653 RAYCRSGRLSMALELREDMKH------KGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
GL P+ Y+ +I + K+G+ L+ EM+ K +
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 9/291 (3%)
Query: 77 QKGLV--SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVD 134
KG V + + A + LC G++ + +G +D+ +Y +LI C ++++D
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 135 KAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
+A+ L EM+ RG P TY+ L+ ++V EA G+ PDV Y+ +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 195 TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
E + EF +M+ K + P+ Y+ LI + C RLS A +L +M G+
Sbjct: 618 DGCCKAE-RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 255 STGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR 314
S YTSL+ + + L + ++ + P++ Y ALI G+ +G+
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMR------MEGLEPNVFHYTALIDGYGKLGQ 730
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+ +LR M + P+ ++Y+ +I + + G A L+ EM EK I
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 140/310 (45%), Gaps = 13/310 (4%)
Query: 59 ARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQR 118
+ E+ V ++ E +V+FN +CG R M +G+
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG--RYDEAFMFKEKMVERGMEPTLI 331
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY+ L+ + + AY VL EM +GF P+V YN L+ ++ E + +A I +M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+GLS YNT+I G + + D A +M+ G + +++ +I LC
Sbjct: 392 VSKGLSLTSSTYNTLIK-GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFS 296
A EML +S G T+L++ C G+ SK L KGF+ D TR
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD--TR-- 506
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
T NAL++G C G+ +EA I + + G D VSY+T+IS C + A+
Sbjct: 507 ----TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 357 MVEMNEKEIR 366
+ EM ++ ++
Sbjct: 563 LDEMVKRGLK 572
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
VS+N I CGK ++ M ++GL D TY+ LI + +V++A +
Sbjct: 541 VSYNTL--ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
+ G P V TY+ ++ C+ +R E M + + P+ +YN +I +
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR-AYCR 657
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
L ALE + M KGI P++ TY+ LI + R+ EA LF EM GL
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
YT+L++ + G+ KV L + P+ +TY +I G+ G EA
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHS------KNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+L M E G+ PD+++Y I + K G
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 12/237 (5%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
KG+ + T L+ E K + +++ +G SP V + + A+C+ +V E
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEE 278
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A + M + G++P+V +NT+I G D A FK KMVE+G+ P TYS L+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVID-GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFL 288
L +R+ +A+ + +EM + G Y +L+++F G +K + D + KG
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG-- 395
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
S + TYN LI G+C G+ + A +L+ M +G + + S+++VI C
Sbjct: 396 ------LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 11/236 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +KG + Y +LI F ++KA ++ M+ +G S + +TYN L++ YC+ +
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
A +L+ M G + + + ++I L D+AL F +M+ + + P +
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH-LMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--K 285
LI LC + S+A +L+ + L G +L++ C G+ + F + I +
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
G + D V+YN LI G C + +EA L M + GL PD +YS +I
Sbjct: 535 GCVMD--------RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 13/300 (4%)
Query: 70 EVAEKTNQKGLVSFNAT--ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
E+ + KGL ++T I+ C G+ M G ++Q ++TS+I +
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C D A + + EM+ R SP L+ C+ + +A + ++G D
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
N ++ G + +LD A + +++ +G + +Y+ LI C +++L EAF
Sbjct: 506 RTSNALL-HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDFVTRFSPSLVTYNAL 305
EM++ GL Y+ L+ + + D K G LPD + TY+ +
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD--------VYTYSVM 616
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
I G C R EE M + P+ V Y+ +I +C+ G MA EL +M K I
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 5/202 (2%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
+ + I C R M K + + Y LI +C + A ++ +
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD--Q 200
M +G SP+ ATY L++ RV EA + M GL P+V Y +I G Q
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
++++ L +M K + P+ TY+ +I + ++EA L EM G+
Sbjct: 731 MVKVECLLR---EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 261 YTSLMNAFCLEGEFSKVFHLHD 282
Y + + +G + F D
Sbjct: 788 YKEFIYGYLKQGGVLEAFKGSD 809
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 126/280 (45%), Gaps = 7/280 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I LC G+ KG +D RT +L+H C ++D+A+++ E++
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
RG +YN L+ C + ++ EA L M RGL PD Y +I+ G +++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY-SILICGLFNMNKVE 592
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A++F G+LP TYS +I C R E + F EM+ + Y L+
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
A+C G S L + +K SP+ TY +LI G + R EEA + M
Sbjct: 653 RAYCRSGRLSMALELREDMKH------KGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
GL P+ Y+ +I + K+G+ L+ EM+ K +
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 9/291 (3%)
Query: 77 QKGLV--SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVD 134
KG V + + A + LC G++ + +G +D+ +Y +LI C ++++D
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 135 KAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
+A+ L EM+ RG P TY+ L+ ++V EA G+ PDV Y+ +I
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 195 TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
E + EF +M+ K + P+ Y+ LI + C RLS A +L +M G+
Sbjct: 618 DGCCKAE-RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 255 STGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR 314
S YTSL+ + + L + ++ + P++ Y ALI G+ +G+
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMR------MEGLEPNVFHYTALIDGYGKLGQ 730
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+ +LR M + P+ ++Y+ +I + + G A L+ EM EK I
Sbjct: 731 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 140/310 (45%), Gaps = 13/310 (4%)
Query: 59 ARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQR 118
+ E+ V ++ E +V+FN +CG R M +G+
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG--RYDEAFMFKEKMVERGMEPTLI 331
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY+ L+ + + AY VL EM +GF P+V YN L+ ++ E + +A I +M
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+GLS YNT+I G + + D A +M+ G + +++ +I LC
Sbjct: 392 VSKGLSLTSSTYNTLIK-GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFS 296
A EML +S G T+L++ C G+ SK L KGF+ D TR
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD--TR-- 506
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
T NAL++G C G+ +EA I + + G D VSY+T+IS C + A+
Sbjct: 507 ----TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF 562
Query: 357 MVEMNEKEIR 366
+ EM ++ ++
Sbjct: 563 LDEMVKRGLK 572
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
VS+N I CGK ++ M ++GL D TY+ LI + +V++A +
Sbjct: 541 VSYNTL--ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
+ G P V TY+ ++ C+ +R E M + + P+ +YN +I +
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR-AYCR 657
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
L ALE + M KGI P++ TY+ LI + R+ EA LF EM GL
Sbjct: 658 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 717
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
YT+L++ + G+ KV L + P+ +TY +I G+ G EA
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHS------KNVHPNKITYTVMIGGYARDGNVTEASR 771
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+L M E G+ PD+++Y I + K G
Sbjct: 772 LLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 12/237 (5%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
KG+ + T L+ E K + +++ +G SP V + + A+C+ +V E
Sbjct: 220 KGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEE 278
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A + M + G++P+V +NT+I G D A FK KMVE+G+ P TYS L+
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVID-GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFL 288
L +R+ +A+ + +EM + G Y +L+++F G +K + D + KG
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG-- 395
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
S + TYN LI G+C G+ + A +L+ M +G + + S+++VI C
Sbjct: 396 ------LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 446
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 11/236 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +KG + Y +LI F ++KA ++ M+ +G S + +TYN L++ YC+ +
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
A +L+ M G + + + ++I L D+AL F +M+ + + P +
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH-LMFDSALRFVGEMLLRNMSPGGGLLT 474
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--K 285
LI LC + S+A +L+ + L G +L++ C G+ + F + I +
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
G + D V+YN LI G C + +EA L M + GL PD +YS +I
Sbjct: 535 GCVMD--------RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 13/300 (4%)
Query: 70 EVAEKTNQKGLVSFNAT--ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
E+ + KGL ++T I+ C G+ M G ++Q ++TS+I +
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C D A + + EM+ R SP L+ C+ + +A + ++G D
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
N ++ G + +LD A + +++ +G + +Y+ LI C +++L EAF
Sbjct: 506 RTSNALL-HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDFVTRFSPSLVTYNAL 305
EM++ GL Y+ L+ + + D K G LPD + TY+ +
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD--------VYTYSVM 616
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
I G C R EE M + P+ V Y+ +I +C+ G MA EL +M K I
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 5/202 (2%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
+ + I C R M K + + Y LI +C + A ++ +
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD--Q 200
M +G SP+ ATY L++ RV EA + M GL P+V Y +I G Q
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 730
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
++++ L +M K + P+ TY+ +I + ++EA L EM G+
Sbjct: 731 MVKVECLLR---EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 261 YTSLMNAFCLEGEFSKVFHLHD 282
Y + + +G + F D
Sbjct: 788 YKEFIYGYLKQGGVLEAFKGSD 809
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 125/262 (47%), Gaps = 13/262 (4%)
Query: 88 TIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRG 147
+ L G+ R+ M R G + TY L+ C +VD A K+L EM ++G
Sbjct: 152 VLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG 211
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTA 207
P +Y ++ + CE V+E R +A+R P V +YN +I G +E + A
Sbjct: 212 CCPDAVSYTTVISSMCEVGLVKEG----RELAER-FEPVVSVYNALIN-GLCKEHDYKGA 265
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
E +MVEKGI P+ +YS LI LC ++ AF +ML+ G +SL+
Sbjct: 266 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG 325
Query: 268 FCLEG-EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMA 326
L G F + + I+GF P++V YN L+ G C G +A+ + M
Sbjct: 326 CFLRGTTFDALDLWNQMIRGF------GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHME 379
Query: 327 EMGLSPDAVSYSTVISRFCKIG 348
E+G SP+ +Y ++I+ F K G
Sbjct: 380 EIGCSPNIRTYGSLINGFAKRG 401
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 17/298 (5%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+RE+ EK ++S+ + I LC G++ M ++G + T +SL+
Sbjct: 269 MREMVEKGISPNVISY--STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC 326
Query: 128 CHQEEVDKAYKVLSEMIDRGF--SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSP 185
+ A + ++MI RGF P+V YN LV+ +C + +A + M + G SP
Sbjct: 327 FLRGTTFDALDLWNQMI-RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSP 385
Query: 186 DVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDL 245
++ Y ++I G + LD A+ KM+ G P+ Y+ ++ +LC + EA L
Sbjct: 386 NIRTYGSLIN-GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL 444
Query: 246 FREMLRGGLSTGEPAYTSLMNAFCLEGEFS---KVFHLHDAIKGFLPDFVTRFSPSLVTY 302
M + + P + + + C G KVF + R P++VTY
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH--------RCPPNIVTY 496
Query: 303 NALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
N L+ G R EEA G+ R + G+ + +Y+T++ C G PG+A +L+ +M
Sbjct: 497 NELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM 554
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 16/284 (5%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F ++ LC ++ M+ KG D +YT++I C V + E
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----RE 237
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
+ +R F P V+ YN L+ C+E + A ++R M ++G+SP+V Y+T+I +
Sbjct: 238 LAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG- 295
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLS-EAFDLFREMLRG-GLSTGEPA 260
+++ A F +M+++G P+ T S L+ CF R + +A DL+ +M+RG GL A
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKG-CFLRGTTFDALDLWNQMIRGFGLQPNVVA 354
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
Y +L+ FC G K + ++ SP++ TY +LI G G + A+
Sbjct: 355 YNTLVQGFCSHGNIVKAVSVFSHMEEI------GCSPNIRTYGSLINGFAKRGSLDGAVY 408
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKE 364
I M G P+ V Y+ ++ C+ + A E ++E+ KE
Sbjct: 409 IWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA-ESLIEIMSKE 451
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 12/273 (4%)
Query: 77 QKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
Q +V++N +Q C G + M G + + RTY SLI+ F + +D A
Sbjct: 349 QPNVVAYNTL--VQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW 196
+ ++M+ G P+V Y +V A C + +EA ++ +M+ +P V +N I
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 197 GGDQELELDTALE-FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS 255
D LD A + F+ + P+ TY+ L+ L R+ EA+ L RE+ G+
Sbjct: 467 LCDAG-RLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 256 TGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRF 315
Y +L++ C G L + V SP +T N +I +C G+
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKM------MVDGKSPDEITMNMIILAYCKQGKA 579
Query: 316 EEALGILR--GMAEMGLSPDAVSYSTVISRFCK 346
E A +L PD +SY+ VI C+
Sbjct: 580 ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCR 612
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 113/247 (45%), Gaps = 8/247 (3%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
Y +LI+ C + + A++++ EM+++G SP+V +Y+ L+ C ++ A L M
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK-GILPHADTYSWLIVSLCFER 237
RG P++ ++++ + D AL+ +M+ G+ P+ Y+ L+ C
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
+ +A +F M G S Y SL+N F G ++ + + + P
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM------LTSGCCP 420
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
++V Y ++ C +F+EA ++ M++ +P +++ I C G A ++
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 358 VEMNEKE 364
+M ++
Sbjct: 481 RQMEQQH 487
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 14/243 (5%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
T+ +I +VD +L +M +GF S + ++ Y + A + +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 179 ADRGLSPDVDIYNTII-TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
+ G P V IYN ++ T G+ +++ + M G P+ TY+ L+ +LC
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMV--YRDMKRDGFEPNVFTYNVLLKALCKNN 195
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
++ A L EM G +YT+++++ C G + L + RF P
Sbjct: 196 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE-----------RFEP 244
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+ YNALI G C ++ A ++R M E G+SP+ +SYST+I+ C G+ +A+ +
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 358 VEM 360
+M
Sbjct: 305 TQM 307
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 14/219 (6%)
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTA 207
F + T+ ++R + +V +L+ M +G D++ ++I+ L + A
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLA-ERA 130
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
+E ++ E G P Y+ ++ +L E R+ + ++R+M R G Y L+ A
Sbjct: 131 VEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKA 190
Query: 268 FCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMA 326
C + D K L + + P V+Y +I C +G +E R +A
Sbjct: 191 LCKNNKV-------DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----RELA 239
Query: 327 EMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
E P Y+ +I+ CK + A+ELM EM EK I
Sbjct: 240 ER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGI 277
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 133/261 (50%), Gaps = 9/261 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G++ D ++T LIH FC + A +L +M+ GF PS+ T L+ +C+ +R
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+EA ++ M G P+V IYNT+I G + +L+ ALE M +KGI A TY+
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVIN-GLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI L R ++A L R+M++ + +T+L++ F EG + +L+
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY------ 277
Query: 288 LPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ + R P++ TYN+LI G C G +A + M G PD V+Y+T+I+ FCK
Sbjct: 278 -KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK 336
Query: 347 IGEPGMAYELMVEMNEKEIRG 367
+L EM + + G
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVG 357
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 18/332 (5%)
Query: 35 IPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGL----VSFNATATIQ 90
+ GF N+ + ++GL +D+ EV +KG+ V++N I
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCK-----NRDLNNALEVFYCMEKKGIRADAVTYNTL--IS 227
Query: 91 DLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSP 150
L GR M ++ + + +T+LI F + + +A + EMI R P
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Query: 151 SVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEF 210
+V TYN L+ +C + +A + +M +G PDV YNT+IT G + ++ ++
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT-GFCKSKRVEDGMKL 346
Query: 211 KAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCL 270
+M +G++ A TY+ LI C +L+ A +F M+ G+S Y L++ C
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 271 EGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGL 330
G+ K + + ++ + ++TYN +I G C + +EA + R + G+
Sbjct: 407 NGKIEKALVMVEDLQK------SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 331 SPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
PDA++Y T+IS C+ G A +L M E
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRMKE 492
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 11/244 (4%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
T SL++ FC +A ++ M GF P+V YN ++ C+ + A + M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+G+ D YNT+I+ + D A + MV++ I P+ ++ LI + E
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLR-DMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFS 296
L EA +L++EM+R + Y SL+N FC+ G ++ D + KG PD
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD------ 323
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
+VTYN LI G C R E+ + + M GL DA +Y+T+I +C+ G+ +A ++
Sbjct: 324 --VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 357 MVEM 360
M
Sbjct: 382 FNRM 385
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 7/281 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
I LC + M +KG+ D TY +LI + A ++L +M+
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
R P+V + L+ + +E + EA + + M R + P+V YN++I D
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
F MV KG P TY+ LI C +R+ + LF EM GL Y +L+
Sbjct: 308 AKYMFDL-MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ +C G+ L+ A K F SP +VTYN L+ C G+ E+AL ++ +
Sbjct: 367 HGYCQAGK------LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ + D ++Y+ +I C+ + A+ L + K ++
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 19/288 (6%)
Query: 52 SGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRK 111
SG W AR +R++ ++ ++ F TA I +G + M R+
Sbjct: 232 SGRWTDAARL------LRDMVKRKIDPNVIFF--TALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
+ + TY SLI+ FC + A + M+ +G P V TYN L+ +C+ RV +
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+ M +GL D YNT+I G Q +L+ A + +MV+ G+ P TY+ L+
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLI-HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLP 289
LC ++ +A + ++ + + Y ++ C + + + L ++ KG P
Sbjct: 403 CLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSY 337
D + Y +I G C G EA + R M E G P Y
Sbjct: 463 D--------AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER--RLSEAFDLFREMLRGGLSTGEPA 260
+ D + KM GI D YS+ I+ CF R RLS A L +M++ G
Sbjct: 94 KFDIVIYLYHKMENLGI--SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVT 151
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
SL+N FC F + L D++ GF F P++V YN +I G C AL
Sbjct: 152 LGSLLNGFCQGNRFQEAVSLVDSMDGF------GFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+ M + G+ DAV+Y+T+IS G A L+ +M +++I
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 7/237 (2%)
Query: 129 HQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVD 188
H + D A+ + EM+ PS+ + +++ + ++ + M + G+S D+
Sbjct: 56 HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 115
Query: 189 IYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFRE 248
+ TI+ + L AL KM++ G P T L+ C R EA L
Sbjct: 116 SF-TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 249 MLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYG 308
M G Y +++N C K L++A++ F VTYN LI G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLC------KNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Query: 309 HCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
GR+ +A +LR M + + P+ + ++ +I F K G A L EM + +
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 160/361 (44%), Gaps = 51/361 (14%)
Query: 47 ESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXX 106
+ NKV G++ R + + R++ + + SFN I+ C ++
Sbjct: 108 DCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL--IKCFCDCHKLSFSLSTFG 165
Query: 107 XMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF---------------SPS 151
+ + G D T+ +L+H C ++ + +A + M++ GF +P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
V T+N L+ C E RV EAA ++ M +GL DV Y TI+ G + + +AL
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN-GMCKMGDTKSALNLL 284
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
+KM E I P YS +I LC + S+A LF EML G++ Y +++ FC
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 272 GEFSKVFH-LHDAI-KGFLPDFVTRFS---------------------------PSLVTY 302
G +S L D I + PD +T + P VTY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 303 NALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
N++IYG C RF++A + M ++ SPD V+++T+I +C+ +L+ E++
Sbjct: 405 NSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 363 K 363
+
Sbjct: 461 R 461
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 27/288 (9%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+++FN I LC +GR+ M KGL +D TY ++++ C + A +
Sbjct: 226 VITFNTL--INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT---- 195
LS+M + P V Y+ ++ C++ +A + M ++G++P+V YN +I
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 196 ---WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
W Q L D M+E+ I P T++ LI + E +L EA L EML
Sbjct: 344 FGRWSDAQRLLRD--------MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM 312
+ Y S++ FC F H+ D + SP +VT+N +I +C
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----------SPDVVTFNTIIDVYCRA 445
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
R +E + +LR ++ GL + +Y+T+I FC++ A +L EM
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 17/302 (5%)
Query: 68 IREVAEKTNQKGLVSFNA--TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIH 125
+R++ E+ +++FNA +A++++ G++ M + + D TY S+I+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKE----GKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 126 MFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSP 185
FC D A M D SP V T+N ++ YC RV E +LR ++ RGL
Sbjct: 410 GFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 186 DVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDL 245
+ YNT+I G + L+ A + +M+ G+ P T + L+ C +L EA +L
Sbjct: 466 NTTTYNTLI-HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 246 FREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNAL 305
F + + AY +++ C + + + L + LP + P + TYN +
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS----LP--IHGVEPDVQTYNVM 578
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
I G C +A + M + G PD +Y+T+I K GE + EL+ EM
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 366 RG 367
G
Sbjct: 639 SG 640
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 124/275 (45%), Gaps = 11/275 (4%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+A I LC G M KG+A + TY +I FC A ++L +MI+
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
R +P V T+N L+ A +E ++ EA + M R + PD YN++I +G + D
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI-YGFCKHNRFD 418
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A M + P T++ +I C +R+ E L RE+ R GL Y +L+
Sbjct: 419 DA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ FC +V +L+ A F P +T N L+YG C + EEAL + +
Sbjct: 475 HGFC------EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
+ D V+Y+ +I CK + A++L +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 8/226 (3%)
Query: 80 LVSFNATATIQDL-CGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYK 138
+V+FN TI D+ C R+ ++R+GL + TY +LIH FC + ++ A
Sbjct: 432 VVTFN---TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGG 198
+ EMI G P T N L+ +CE +++ EA + V+ + D YN II G
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN-IIIHGM 547
Query: 199 DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE 258
+ ++D A + + G+ P TY+ +I C + +S+A LF +M G
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 259 PAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPD-FVTRFSPSLVT 301
Y +L+ GE K L ++ GF D F + L+T
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLIT 653
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 29/237 (12%)
Query: 131 EEVDKAYKVLSEMI-DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+ +D A M+ R F +V NK++ + +R A + R M R + ++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
+N +I D +L +L K+ + G P T++ L+ LC E R+SEA LF M
Sbjct: 144 FNILIKCFCDCH-KLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
+ G + ++ +P ++T+N LI G
Sbjct: 203 VETGFLEAVALFDQMVE--------------------------IGLTPVVITFNTLINGL 236
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
C GR EA ++ M GL D V+Y T+++ CK+G+ A L+ +M E I+
Sbjct: 237 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 139/284 (48%), Gaps = 19/284 (6%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I C G+M M GL D YTSLI FC E+D+ + E+++RG
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW----GGDQELEL 204
SP TYN L+R +C+ +++EA+ I M +RG+ P+V Y +I G +E
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE--- 335
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
AL+ M+EK P+A TY+ +I LC + +++A ++ M + Y L
Sbjct: 336 --ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 265 MNAFCLEG---EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGI 321
+ C +G E SK+ +L L D + P +++YNALI+G C R +AL I
Sbjct: 394 LGGLCAKGDLDEASKLLYL------MLKD-SSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 322 LRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+ E + D V+ + +++ K G+ A EL ++++ +I
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 130/277 (46%), Gaps = 30/277 (10%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
+ + L+ + + A+ VL+ M+ RGF+ +V +N L++ C +A +LR M
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
L PDV YNT+I G + EL+ ALE +M G T+ LI + C +
Sbjct: 169 RRNSLMPDVFSYNTVIR-GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE-------FSKVFHLHDA-------- 283
+ EA +EM GL YTSL+ FC GE F +V D+
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 284 -IKGF-----------LPDFVTR--FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG 329
I+GF + +F+ P++ TY LI G C +G+ +EAL +L M E
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 330 LSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
P+AV+Y+ +I++ CK G A E++ M ++ R
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 131/278 (47%), Gaps = 7/278 (2%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
+N ++ LC M R L D +Y ++I FC +E++KA ++ +E
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M G S S+ T+ L+ A+C+ ++ EA G L+ M GL D+ +Y ++I D
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG- 261
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
ELD +++E+G P A TY+ LI C +L EA ++F M+ G+ YT
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
L++ C G+ + L + + P+ VTYN +I C G +A+ I+
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLM------IEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
M + PD ++Y+ ++ C G+ A +L+ M
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 162/342 (47%), Gaps = 18/342 (5%)
Query: 43 NLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXX 102
N+ + + GL + +T++ + + + EK + V++N I LC G +
Sbjct: 316 NVYTYTGLIDGLCGV-GKTKEALQLLNLMIEKDEEPNAVTYNII--INKLCKDGLVADAV 372
Query: 103 XXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI-DRGFS-PSVATYNKLVR 160
M ++ D TY L+ C + ++D+A K+L M+ D ++ P V +YN L+
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Query: 161 AYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGIL 220
C+E+R+ +A I ++ ++ L + I+ + +++ A+E ++ + I+
Sbjct: 433 GLCKENRLHQALDIYDLLVEK-LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 221 PHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL 280
++DTY+ +I C L+ A L +M L Y L+++ C EG + + L
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 281 HDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
+ ++ P +V++N +I G G + A +L GM+ GLSPD +YS +
Sbjct: 552 FEEMQR------DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKL 605
Query: 341 ISRFCKIG---EPGMAYELMVEMN---EKEIRGVLMKSCINH 376
I+RF K+G E ++ MV+ + I ++K CI+
Sbjct: 606 INRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 42/264 (15%)
Query: 136 AYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG------------- 182
A+ +M++ + + + L+ Y + + A G+L +M RG
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 183 ----------------------LSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGIL 220
L PDV YNT+I G + EL+ ALE +M G
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR-GFCEGKELEKALELANEMKGSGCS 209
Query: 221 PHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL 280
T+ LI + C ++ EA +EM GL YTSL+ FC GE + L
Sbjct: 210 WSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKAL 269
Query: 281 HDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
D + SP +TYN LI G C +G+ +EA I M E G+ P+ +Y+ +
Sbjct: 270 FDEV------LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 341 ISRFCKIGEPGMAYELMVEMNEKE 364
I C +G+ A +L+ M EK+
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKD 347
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 100/257 (38%), Gaps = 55/257 (21%)
Query: 154 TYNKLVRAY----------CEED--RVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
Y+KLV A+ CE+ +++ A + + D G S N + +
Sbjct: 28 VYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRN 87
Query: 202 LELDTALEFKAKMVE-----------------------------------KGILPHADTY 226
EL A F KM+E +G + +
Sbjct: 88 HEL--AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNH 145
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG 286
+ L+ LC +A L REM R L +Y +++ FC E K L + +KG
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 287 FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ S SLVT+ LI C G+ +EA+G L+ M MGL D V Y+++I FC
Sbjct: 206 ------SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 347 IGEPGMAYELMVEMNEK 363
GE L E+ E+
Sbjct: 260 CGELDRGKALFDEVLER 276
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 160/361 (44%), Gaps = 51/361 (14%)
Query: 47 ESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXX 106
+ NKV G++ R + + R++ + + SFN I+ C ++
Sbjct: 108 DCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL--IKCFCDCHKLSFSLSTFG 165
Query: 107 XMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF---------------SPS 151
+ + G D T+ +L+H C ++ + +A + M++ GF +P
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
V T+N L+ C E RV EAA ++ M +GL DV Y TI+ G + + +AL
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN-GMCKMGDTKSALNLL 284
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
+KM E I P YS +I LC + S+A LF EML G++ Y +++ FC
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 272 GEFSKVFH-LHDAI-KGFLPDFVTRFS---------------------------PSLVTY 302
G +S L D I + PD +T + P VTY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 303 NALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
N++IYG C RF++A + M ++ SPD V+++T+I +C+ +L+ E++
Sbjct: 405 NSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 363 K 363
+
Sbjct: 461 R 461
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 27/288 (9%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+++FN I LC +GR+ M KGL +D TY ++++ C + A +
Sbjct: 226 VITFNTL--INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT---- 195
LS+M + P V Y+ ++ C++ +A + M ++G++P+V YN +I
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 196 ---WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
W Q L D M+E+ I P T++ LI + E +L EA L EML
Sbjct: 344 FGRWSDAQRLLRD--------MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM 312
+ Y S++ FC F H+ D + SP +VT+N +I +C
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----------SPDVVTFNTIIDVYCRA 445
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
R +E + +LR ++ GL + +Y+T+I FC++ A +L EM
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 17/302 (5%)
Query: 68 IREVAEKTNQKGLVSFNA--TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIH 125
+R++ E+ +++FNA +A++++ G++ M + + D TY S+I+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKE----GKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 126 MFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSP 185
FC D A M D SP V T+N ++ YC RV E +LR ++ RGL
Sbjct: 410 GFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 186 DVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDL 245
+ YNT+I G + L+ A + +M+ G+ P T + L+ C +L EA +L
Sbjct: 466 NTTTYNTLI-HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 246 FREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNAL 305
F + + AY +++ C + + + L + LP + P + TYN +
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS----LP--IHGVEPDVQTYNVM 578
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
I G C +A + M + G PD +Y+T+I K GE + EL+ EM
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 366 RG 367
G
Sbjct: 639 SG 640
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 124/275 (45%), Gaps = 11/275 (4%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+A I LC G M KG+A + TY +I FC A ++L +MI+
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
R +P V T+N L+ A +E ++ EA + M R + PD YN++I +G + D
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI-YGFCKHNRFD 418
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A M + P T++ +I C +R+ E L RE+ R GL Y +L+
Sbjct: 419 DA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ FC +V +L+ A F P +T N L+YG C + EEAL + +
Sbjct: 475 HGFC------EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 528
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
+ D V+Y+ +I CK + A++L +
Sbjct: 529 QMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 7/217 (3%)
Query: 80 LVSFNATATIQDL-CGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYK 138
+V+FN TI D+ C R+ ++R+GL + TY +LIH FC + ++ A
Sbjct: 432 VVTFN---TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGG 198
+ EMI G P T N L+ +CE +++ EA + V+ + D YN II G
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYN-IIIHGM 547
Query: 199 DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE 258
+ ++D A + + G+ P TY+ +I C + +S+A LF +M G
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 259 PAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDFVT 293
Y +L+ GE K L ++ GF D T
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 29/237 (12%)
Query: 131 EEVDKAYKVLSEMI-DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+ +D A M+ R F +V NK++ + +R A + R M R + ++
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYS 143
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
+N +I D +L +L K+ + G P T++ L+ LC E R+SEA LF M
Sbjct: 144 FNILIKCFCDCH-KLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
+ G + A L + ++ +P ++T+N LI G
Sbjct: 203 VETGF----------LEAVALFDQMVEI----------------GLTPVVITFNTLINGL 236
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
C GR EA ++ M GL D V+Y T+++ CK+G+ A L+ +M E I+
Sbjct: 237 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 30/285 (10%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M ++ + + TY +++ C ++D AY ++ EMI G P+V Y L++ + + R
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+A +L+ M ++G++PD+ YN++I G + +D A F +MVE G+ P+A TY
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLII-GLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--K 285
I + A +EM G+ + T L+N +C +G+ + + ++ +
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 286 GFLPDFVTR---------------------------FSPSLVTYNALIYGHCCMGRFEEA 318
G L D T +P + +Y LI G +G ++A
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
I M E GL+P+ + Y+ ++ FC+ GE A EL+ EM+ K
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 153/372 (41%), Gaps = 73/372 (19%)
Query: 59 ARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQR 118
A +K V +RE N+ T I + C KG++ M +G+ D +
Sbjct: 539 ASADKYVKEMRECGVLPNK-----VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TYT L++ ++VD A ++ EM +G +P V +Y L+ + + +++A+ I M
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+ GL+P+V IYN ++ G + E++ A E +M KG+ P+A TY +I C
Sbjct: 654 VEEGLTPNVIIYNMLLG-GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFC----------------------------- 269
L+EAF LF EM GL YT+L++ C
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNAL 772
Query: 270 --------------------LEGEFSKVFHLHDAIKGFLPDFVTR--------------- 294
++G F + +D + D++ +
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 295 ---FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
P+++TY +L+ G+ MGR E + G+ PD + YS +I+ F K G
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 352 MAYELMVEMNEK 363
A L+ +M K
Sbjct: 893 KALVLVDQMFAK 904
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 9/287 (3%)
Query: 78 KGLVSFNAT--ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDK 135
KGLV T I LC R+ M+ G++LD TY+ LI D
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 136 AYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT 195
A ++ EM+ G + Y+ + +E + +A + M GL P Y ++I
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 196 WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS 255
G +E + E +M ++ I+ TY ++ +C L A+++ +EM+ G
Sbjct: 391 -GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 256 TGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRF 315
YT+L+ F F + +K +P + YN+LI G R
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE------QGIAPDIFCYNSLIIGLSKAKRM 503
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
+EA L M E GL P+A +Y IS + + E A + + EM E
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 33/249 (13%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
L+ +D + V M++R V TY+ L+ A+C V+
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQ------------- 238
Query: 183 LSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEA 242
L DV ++ T + L +D AL+ K M+ KG++P TY LI LC +RL +A
Sbjct: 239 LGKDV-LFKTEKEFR-TATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296
Query: 243 FDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTY 302
L EM G+S Y+ L++ L+G + DA KG + + V+ +
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGL-LKGRNA------DAAKGLVHEMVSHG----INI 345
Query: 303 NALIYGHCCM------GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
+Y CC+ G E+A + GM GL P A +Y+++I +C+ YEL
Sbjct: 346 KPYMY-DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYEL 404
Query: 357 MVEMNEKEI 365
+VEM ++ I
Sbjct: 405 LVEMKKRNI 413
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 148/323 (45%), Gaps = 23/323 (7%)
Query: 51 VSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNR 110
V GL+ +E V + + K Q LV++ A I LC +G M +
Sbjct: 187 VHGLFQHNKASEA-VALVERMVVKGCQPDLVTYGAV--INGLCKRGEPDLALNLLNKMEK 243
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
+ D Y ++I C + +D A+ + ++M +G P V TYN L+ C R +
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVE-KGILPHADTYSWL 229
A+ +L M ++ ++PD+ +N +I +E +L A + +MV+ K P Y+ L
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALID-AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD------A 283
I C +R+ E ++FREM + GL YT+L++ F F D
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF---------FQARDCDNAQMV 413
Query: 284 IKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
K + D V P ++TYN L+ G C G E AL + M + + D V+Y+T+I
Sbjct: 414 FKQMVSDGV---HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
Query: 344 FCKIGEPGMAYELMVEMNEKEIR 366
CK G+ ++L ++ K ++
Sbjct: 471 LCKAGKVEDGWDLFCSLSLKGVK 493
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 120/253 (47%), Gaps = 7/253 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G++ + TY+ I+ FC + ++ A +L +M+ G+ PS+ T N L+ +C +R
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ EA ++ M + G PD + T++ G Q + A+ +MV KG P TY
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLV-HGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
+I LC A +L +M +G + Y ++++ C K H+ DA F
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC------KYKHMDDAFDLF 273
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P + TYN LI C GR+ +A +L M E ++PD V ++ +I F K
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 348 GEPGMAYELMVEM 360
G+ A +L EM
Sbjct: 334 GKLVEAEKLYDEM 346
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 8/265 (3%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V+ N+ + C R+ M G D T+T+L+H + +A +
Sbjct: 145 IVTLNSL--LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
+ M+ +G P + TY ++ C+ A +L M + DV IYNTII G
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID-GLC 261
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+ +D A + KM KGI P TY+ LI LC R S+A L +ML ++
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
+ +L++AF EG+ + L+D + F P +V YN LI G C R EE +
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF-----PDVVAYNTLIKGFCKYKRVEEGM 376
Query: 320 GILRGMAEMGLSPDAVSYSTVISRF 344
+ R M++ GL + V+Y+T+I F
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGF 401
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 125/279 (44%), Gaps = 8/279 (2%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F I LC GR M K + D + +LI F + ++ +A K+ E
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 143 MI-DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
M+ + P V YN L++ +C+ RV E + R M+ RGL + Y T+I G Q
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI-HGFFQA 404
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
+ D A +MV G+ P TY+ L+ LC + A +F M + + Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGI 321
T+++ A C G+ + D F + P++VTY ++ G C G EEA +
Sbjct: 465 TTMIEALCKAGK------VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Query: 322 LRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
M E G P++ +Y+T+I + G+ + EL+ EM
Sbjct: 519 FVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 9/247 (3%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
++ L+ + D + +M + G S ++ TY+ + +C ++ A IL M
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G P + N+++ G + A+ +MVE G P T++ L+ L +
Sbjct: 138 KLGYGPSIVTLNSLLN-GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA 196
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI-KGFLPDFVTRFSPS 298
SEA L M+ G Y +++N C GE +L + + KG +
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG-------KIEAD 249
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
+V YN +I G C ++A + M G+ PD +Y+ +IS C G A L+
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 359 EMNEKEI 365
+M EK I
Sbjct: 310 DMLEKNI 316
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 11/237 (4%)
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
++D A + +M+ PS+ ++KL+ A + ++ + M + G+S ++ Y+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
I + + +L AL KM++ G P T + L+ C R+SEA L +M+
Sbjct: 115 IFINYFCRRS-QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD--AIKGFLPDFVTRFSPSLVTYNALIYGH 309
G +T+L++ + S+ L + +KG PD LVTY A+I G
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD--------LVTYGAVINGL 225
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
C G + AL +L M + + D V Y+T+I CK A++L +M K I+
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 11/210 (5%)
Query: 158 LVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK 217
L R ++ ++ +A G+ M P + ++ +++ + D + +M
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMN-KFDLVISLGEQMQNL 104
Query: 218 GILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKV 277
GI + TYS I C +LS A + +M++ G SL+N FC S+
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 278 FHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAV 335
L D + G+ PD VT+ L++G + EA+ ++ M G PD V
Sbjct: 165 VALVDQMVEMGYQPD--------TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 216
Query: 336 SYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+Y VI+ CK GEP +A L+ +M + +I
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKI 246
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 37/233 (15%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V++N I+ C R+ M+++GL + TYT+LIH F + D A V
Sbjct: 356 VVAYNTL--IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW--- 196
+M+ G P + TYN L+ C V A + M R + D+ Y T+I
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 197 GGDQE--LELDTALEFKA-----------------------------KMVEKGILPHADT 225
G E +L +L K +M E G LP++ T
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 226 YSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF 278
Y+ LI + + + + +L +EM G + G+ + L+ +G K F
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEMRSCGFA-GDASTFGLVTNMLHDGRLDKSF 585
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 160/336 (47%), Gaps = 15/336 (4%)
Query: 32 KVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATI-Q 90
K +I F+ G ++PE+ + + N + ++D + V + + G+V T T+
Sbjct: 244 KKLIKEFSVKG-IKPEAYTYNTIINAYVK-QRDFSGVEGVLKVMKKDGVVYNKVTYTLLM 301
Query: 91 DLCGK-GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFS 149
+L K G+M M +G+ D YTSLI C + + +A+ + E+ ++G S
Sbjct: 302 ELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLS 361
Query: 150 PSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALE 209
PS TY L+ C+ + A ++ M +G++ ++NT+I G ++ +D A
Sbjct: 362 PSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID-GYCRKGMVDEASM 420
Query: 210 FKAKMVEKGILPHADTYSWLIVSLCFER--RLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
M +KG AD ++ ++ CF R R EA M+ GG+ +YT+L++
Sbjct: 421 IYDVMEQKGF--QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDV 478
Query: 268 FCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAE 327
+C EG ++ +A + F+ P+ +TYN +IY +C G+ +EA + M
Sbjct: 479 YCKEG------NVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEA 532
Query: 328 MGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
G+ PD+ +Y+++I C A L EM K
Sbjct: 533 NGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK 568
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 129/278 (46%), Gaps = 7/278 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T+ I C KG M + KGL+ TY +LI C E+ A +++EM
Sbjct: 333 TSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS 392
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
+G + + +N L+ YC + V EA+ I VM +G DV NTI + ++ D
Sbjct: 393 KGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC-FNRLKRYD 451
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A ++ +M+E G+ +Y+ LI C E + EA LF EM G+ Y ++
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
A+C +G+ + L ++ D P TY +LI+G C +EA+ + M
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMD------PDSYTYTSLIHGECIADNVDEAMRLFSEM 565
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
GL ++V+Y+ +IS K G+ A+ L EM K
Sbjct: 566 GLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRK 603
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 30/307 (9%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
++ T ++ LC +G + + KG+ + TY ++I+ + Q + VL
Sbjct: 225 YSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKV 284
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M G + TY L+ + ++ +A + M +RG+ DV +Y ++I+W ++
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNC-RKG 343
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+ A ++ EKG+ P + TY LI +C + A L EM G++ + +
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 263 SLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVT------------RFSP----------- 297
+L++ +C +G + ++D + KGF D T R+
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463
Query: 298 ----SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
S V+Y LI +C G EEA + M+ G+ P+A++Y+ +I +CK G+ A
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 354 YELMVEM 360
+L M
Sbjct: 524 RKLRANM 530
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 18/257 (7%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +KGL++D+R+ + + +D ++ M+D G +V + +V C
Sbjct: 180 MVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGE 239
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD-TALEFKAKMVEK-GILPHADT 225
V ++ +++ + +G+ P+ YNTII Q D + +E K+++K G++ + T
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQR---DFSGVEGVLKVMKKDGVVYNKVT 296
Query: 226 YSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI- 284
Y+ L+ ++S+A LF EM G+ + YTSL++ C +G + F L D +
Sbjct: 297 YTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT 356
Query: 285 -KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
KG SPS TY ALI G C +G A ++ M G++ V ++T+I
Sbjct: 357 EKG--------LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDG 408
Query: 344 FCKIG---EPGMAYELM 357
+C+ G E M Y++M
Sbjct: 409 YCRKGMVDEASMIYDVM 425
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ L +YT+LI ++C + V++A ++ EM +G P+ TYN ++ AYC++ +++EA
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+ M G+ PD Y ++I G +D A+ ++M KG+ ++ TY+ +I
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLI-HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
L + EAF L+ EM R G + YT+L+ +
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 70 EVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCH 129
E++ K Q +++N I C +G++ M G+ D TYTSLIH C
Sbjct: 494 EMSSKGVQPNAITYNVM--IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+ VD+A ++ SEM +G + TY ++ + + EA G+ M +G + D +
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Query: 190 YNTII 194
Y +I
Sbjct: 612 YTALI 616
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 149/330 (45%), Gaps = 19/330 (5%)
Query: 44 LQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKG----LVSFNATATIQDLC---GKG 96
+QP + + N +T K + + R+V E G +VS+N I C G G
Sbjct: 219 IQPNVFTFNVVINALCKTGK-MNKARDVMEDMKVYGCSPNVVSYNTL--IDGYCKLGGNG 275
Query: 97 RMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYN 156
+M M ++ + T+ LI F + + + KV EM+D+ P+V +YN
Sbjct: 276 KMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYN 335
Query: 157 KLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVE 216
L+ C ++ EA + M G+ P++ YN +I ++ L AL+ +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM-LKEALDMFGSVKG 394
Query: 217 KGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSK 276
+G +P Y+ LI + C ++ + F L EM R G+ Y L+ C G
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI-- 452
Query: 277 VFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVS 336
+A K ++ P LVT++ L+ G+C G +A +L+ M++MGL P ++
Sbjct: 453 -----EAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507
Query: 337 YSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
Y+ V+ +CK G A + +M EKE R
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQM-EKERR 536
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 130/261 (49%), Gaps = 14/261 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCE--- 164
M R+ + + T+ +I+ C +++KA V+ +M G SP+V +YN L+ YC+
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 165 EDRVREAAGILRVMADRGLSPDVDIYNTIIT--WGGDQELELDTALEFKAKMVEKGILPH 222
++ +A +L+ M + +SP++ +N +I W D L +++ +M+++ + P+
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDN---LPGSMKVFKEMLDQDVKPN 330
Query: 223 ADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD 282
+Y+ LI LC ++SEA + +M+ G+ Y +L+N FC + +
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 283 AIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
++KG P+ YN LI +C +G+ ++ + M G+ PD +Y+ +I+
Sbjct: 391 SVKG------QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 343 RFCKIGEPGMAYELMVEMNEK 363
C+ G A +L ++ K
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSK 465
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 15/248 (6%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
+I + D Y V EMI R P+V T+N ++ A C+ ++ +A ++ M G
Sbjct: 195 MIALLKENRSADVEY-VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 183 LSPDVDIYNTII----TWGGDQEL-ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
SP+V YNT+I GG+ ++ + D L+ +MVE + P+ T++ LI +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK---EMVENDVSPNLTTFNILIDGFWKDD 310
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
L + +F+EML + +Y SL+N C G+ S+ + D + P
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKM------VSAGVQP 364
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+L+TYNALI G C +EAL + + G P Y+ +I +CK+G+ + L
Sbjct: 365 NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 358 VEMNEKEI 365
EM + I
Sbjct: 425 EEMEREGI 432
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 30/325 (9%)
Query: 20 VKTILRNRLLP----LKVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKT 75
+K ++ N + P ++I GF NL P S KV +E+ ++
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNL-PGSMKV----------------FKEMLDQD 326
Query: 76 NQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDK 135
+ ++S+N+ I LC G++ M G+ + TY +LI+ FC + + +
Sbjct: 327 VKPNVISYNSL--INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Query: 136 AYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT 195
A + + +G P+ YN L+ AYC+ ++ + + M G+ PDV YN +I
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 196 WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS 255
G + ++ A + ++ KG LP T+ L+ C + +A L +EM + GL
Sbjct: 445 -GLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 256 TGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRF 315
Y +M +C EG ++ ++ R ++ +YN L+ G+ G+
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEK-----ERRLRMNVASYNVLLQGYSQKGKL 557
Query: 316 EEALGILRGMAEMGLSPDAVSYSTV 340
E+A +L M E GL P+ ++Y V
Sbjct: 558 EDANMLLNEMLEKGLVPNRITYEIV 582
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFL 288
L+++ R F+ F+ G + LM A E + V +++ +
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEM---- 214
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+ P++ T+N +I C G+ +A ++ M G SP+ VSY+T+I +CK+G
Sbjct: 215 --IRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Query: 349 EPGMAYE---LMVEMNEKEI 365
G Y+ ++ EM E ++
Sbjct: 273 GNGKMYKADAVLKEMVENDV 292
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 133/279 (47%), Gaps = 9/279 (3%)
Query: 84 NATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEM 143
++T + DLC R+ M G+ D YT L++ C + V A +++ +M
Sbjct: 108 HSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKM 167
Query: 144 IDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELE 203
D G+ + TYN LVR C + ++ + + +GL+P+ Y+ ++ +E
Sbjct: 168 EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLE-AAYKERG 226
Query: 204 LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTS 263
D A++ +++ KG P+ +Y+ L+ C E R +A LFRE+ G +Y
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 264 LMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILR 323
L+ C +G + + L + G +PS+VTYN LI GR E+AL +L+
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDG------GDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 324 GMAE--MGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
M++ A SY+ VI+R CK G+ + + + EM
Sbjct: 341 EMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 379
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 13/245 (5%)
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
T L++ C + KA +V+ M+ G P + Y LV C+ V A ++ M D
Sbjct: 110 TQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMED 169
Query: 181 RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLS 240
G + YN ++ G L+ +L+F ++++KG+ P+A TYS+L+ + ER
Sbjct: 170 HGYPSNTVTYNALVR-GLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTD 228
Query: 241 EAFDLFREMLRGGLSTGEP---AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
EA L E++ G GEP +Y L+ FC EG DA+ F F
Sbjct: 229 EAVKLLDEIIVKG---GEPNLVSYNVLLTGFCKEG------RTDDAMALFRELPAKGFKA 279
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
++V+YN L+ CC GR+EEA +L M +P V+Y+ +I+ G A +++
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVL 339
Query: 358 VEMNE 362
EM++
Sbjct: 340 KEMSK 344
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 19/342 (5%)
Query: 26 NRLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNA 85
NRL +I ++G + P+++ + L N + +VG ++ EK G S
Sbjct: 120 NRLKKAIRVIELMVSSG-IIPDASAYTYLVNQLCK-RGNVGYAMQLVEKMEDHGYPSNTV 177
Query: 86 T--ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEM 143
T A ++ LC G + + +KGLA + TY+ L+ + D+A K+L E+
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 144 IDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-TWGGDQEL 202
I +G P++ +YN L+ +C+E R +A + R + +G +V YN ++ D
Sbjct: 238 IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW 297
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG--LSTGEPA 260
E +L A+M P TY+ LI SL F R +A + +EM +G +
Sbjct: 298 EEANSL--LAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCC--MGRFEEA 318
Y ++ C EG+ V D + R P+ TYNA+ G C + +EA
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEM------IYRRCKPNEGTYNAI--GSLCEHNSKVQEA 407
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
I++ ++ Y +VI+ C+ G A++L+ EM
Sbjct: 408 FYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEM 449
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 131/312 (41%), Gaps = 10/312 (3%)
Query: 58 KARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQ 117
+ RT+ + RE+ K + +VS+N ++ LC GR M+ A
Sbjct: 259 EGRTDDAMALFRELPAKGFKANVVSYNIL--LRCLCCDGRWEEANSLLAEMDGGDRAPSV 316
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMI--DRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
TY LI+ ++A +VL EM + F + +YN ++ C+E +V L
Sbjct: 317 VTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCL 376
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
M R P+ YN I + + ++ A + K D Y +I SLC
Sbjct: 377 DEMIYRRCKPNEGTYNAIGSLC-EHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCR 435
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
+ AF L EM R G Y++L+ CLEG F+ + ++
Sbjct: 436 KGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEE-----SENC 490
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
P++ +NA+I G C + R + A+ + M E P+ +Y+ ++ E +A E
Sbjct: 491 KPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKE 550
Query: 356 LMVEMNEKEIRG 367
++ E+ +++ G
Sbjct: 551 VLDELRLRKVIG 562
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 95/240 (39%), Gaps = 46/240 (19%)
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+ + ++ L ++ G P+VA +L+ C+ +R+++A ++ +M
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELM----------- 132
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
V GI+P A Y++L+ LC + A L +M
Sbjct: 133 -------------------------VSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKM 167
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIY 307
G + Y +L+ C+ G ++ + + KG +P+ TY+ L+
Sbjct: 168 EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL--------APNAFTYSFLLE 219
Query: 308 GHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
+EA+ +L + G P+ VSY+ +++ FCK G A L E+ K +
Sbjct: 220 AAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA 279
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 148/300 (49%), Gaps = 13/300 (4%)
Query: 67 RIREVAEKTNQKGLVSFNAT-ATIQDLCGKGRMXXXXXXX-XXMNRKGLALDQRTYTSLI 124
+I + EK G+ T T+ C +G + M G + D+ TY +L+
Sbjct: 262 KITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 125 HMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLS 184
++ +A KVL+EM+ GFSPS+ TYN L+ AY + + EA + MA++G
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 185 PDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFD 244
PDV Y T+++ G ++ ++++A+ +M G P+ T++ I + +E
Sbjct: 382 PDVFTYTTLLS-GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 245 LFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDFVTRFSPSLVTY 302
+F E+ GLS + +L+ F G S+V + +K GF+P+ T+
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE--------RETF 492
Query: 303 NALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
N LI + G FE+A+ + R M + G++PD +Y+TV++ + G + +++ EM +
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 111/246 (45%), Gaps = 6/246 (2%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
LD +I M + V A + + + + GFS V +Y L+ A+ R REA +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
+ M + G P + YN I+ G + KM GI P A TY+ LI
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
EA +F EM G S + Y +L++ + K +A+K +
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV------YGKSHRPKEAMKVLNEMVLNG 344
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
FSPS+VTYN+LI + G +EA+ + MAE G PD +Y+T++S F + G+ A
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 355 ELMVEM 360
+ EM
Sbjct: 405 SIFEEM 410
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 137/315 (43%), Gaps = 35/315 (11%)
Query: 73 EKTNQKGLVSFNATATIQDLCGK-GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQE 131
++ + + ++ + A I + GK GR+ + G +LD +YTSLI F +
Sbjct: 163 KQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSG 222
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV-REAAGILRVMADRGLSPDVDIY 190
+A V +M + G P++ TYN ++ + + + ++ M G++PD Y
Sbjct: 223 RYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTY 282
Query: 191 NTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREML 250
NT+IT L + A F+ +M G TY+ L+ R EA + EM+
Sbjct: 283 NTLITCCKRGSLHQEAAQVFE-EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 251 RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD--AIKGFLPDFVTRFS------------ 296
G S Y SL++A+ +G + L + A KG PD T +
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 297 ---------------PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
P++ T+NA I + G+F E + I + GLSPD V+++T++
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 342 SRFCKIGEPGMAYEL 356
+ F G+ GM E+
Sbjct: 462 AVF---GQNGMDSEV 473
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 43/225 (19%)
Query: 135 KAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
+A + SE+ +RGFSP + T N +V Y V +A G+L M +RG +P + YN+++
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 195 TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
+ + + + E +++ KGI P +Y+ +I + C R+ +A +F EM G+
Sbjct: 672 -YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 255 STGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR 314
P ++TYN I +
Sbjct: 731 V-----------------------------------------PDVITYNTFIGSYAADSM 749
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
FEEA+G++R M + G P+ +Y++++ +CK+ A +L VE
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA-KLFVE 793
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
+ +G + D T S++ ++ ++ V KA VL M +RGF+PS+ATYN L+ +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
++ ILR + +G+ PD+ YNT+I + + + A ++M GI+P TY+
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVI-YAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC 269
I S + EA + R M++ G + Y S+++ +C
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC 780
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 134/341 (39%), Gaps = 67/341 (19%)
Query: 70 EVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCH 129
++AEK + + F T + G++ M G + T+ + I M+ +
Sbjct: 374 QMAEKGTKPDV--FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+ + + K+ E+ G SP + T+N L+ + + E +G+ + M G P+ +
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
+NT+I+ + + A+ +M++ G+ P TY+ ++ +L ++ + EM
Sbjct: 492 FNTLIS-AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI------------------------- 284
G E Y SL++A+ E + L + +
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL 610
Query: 285 ------------KGFLPDFVT---------------------------RFSPSLVTYNAL 305
+GF PD T F+PS+ TYN+L
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+Y H F ++ ILR + G+ PD +SY+TVI +C+
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +G TY SL++M + K+ ++L E++ +G P + +YN ++ AYC R
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 168 VREAAGILRVMADRGLSPDVDIYNTII-TWGGDQELELDTALEFKAKMVEKGILPHADTY 226
+R+A+ I M + G+ PDV YNT I ++ D E A+ M++ G P+ +TY
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE--EAIGVVRYMIKHGCRPNQNTY 772
Query: 227 SWLIVSLCFERRLSEAFDLFREMLR 251
+ ++ C R EA LF E LR
Sbjct: 773 NSIVDGYCKLNRKDEA-KLFVEDLR 796
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+RE+ K + ++S+N I C RM M G+ D TY + I +
Sbjct: 687 LREILAKGIKPDIISYNTV--IYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSP 185
++A V+ MI G P+ TYN +V YC+ +R EA L V R L P
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK--LFVEDLRNLDP 800
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 140/292 (47%), Gaps = 42/292 (14%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G A + T+ +LI+ FC + E+D+A+ + M RG P + Y+ L+ Y + +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 172 AGILRVMADRGLSPDVDIYNTII---TWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
+ +G+ DV ++++ I GD L TA +M+ +GI P+ TY+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGD----LATASVVYKRMLCQGISPNVVTYTI 396
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLH-DAIK-G 286
LI LC + R+ EAF ++ ++L+ G+ Y+SL++ FC G F L+ D IK G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 287 FLPDFVT------------------RFSP---------SLVTYNALIYGHCCMGRFEEAL 319
+ PD V RFS ++V +N+LI G C + RF+EAL
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 320 GILRGMAEMGLSPDAVSYSTVI------SRFCKIGEPGMAYELMVEMNEKEI 365
+ R M G+ PD +++TV+ FCK +P + +L M +I
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKI 568
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 136/350 (38%), Gaps = 71/350 (20%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
++TI G + M +G++ + TYT LI C + +A+ + +++
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
RG PS+ TY+ L+ +C+ +R + M G PDV IY ++ Q L L
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A+ F KM+ + I + ++ LI C R EA +FR M G+ +T++M
Sbjct: 480 -AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 266 NAFCLEGEFSK----------------------------VFHL-------HDAIKGFLPD 290
+E F K V HL DA K F
Sbjct: 539 RVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 598
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEA-------------------------------- 318
+ P +VTYN +I G+C + R +EA
Sbjct: 599 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 658
Query: 319 ---LGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+ + MAE G P+AV+Y ++ F K + +++L EM EK I
Sbjct: 659 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 7/236 (2%)
Query: 131 EEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIY 190
++++ A ++LS ++D G +P+V T+ L+ +C+ + A + +VM RG+ PD+ Y
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 191 NTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREML 250
+T+I G + L + ++ + KG+ +S I L+ A +++ ML
Sbjct: 325 STLID-GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 251 RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHC 310
G+S YT L+ C +G + F ++ I PS+VTY++LI G C
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI------LKRGMEPSIVTYSSLIDGFC 437
Query: 311 CMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
G + M +MG PD V Y ++ K G A V+M + IR
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR 493
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 15/251 (5%)
Query: 126 MFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSP 185
+FC + EV KA +++RGF + + NK+++ D++ A+ +L ++ D G +P
Sbjct: 227 LFC-KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAP 284
Query: 186 DVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDL 245
+V + T+I G + E+D A + M ++GI P YS LI L L
Sbjct: 285 NVVTFCTLIN-GFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 246 FREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNAL 305
F + L G+ ++S ++ + G+ + ++ + SP++VTY L
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM------LCQGISPNVVTYTIL 397
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE--PGMA-YELMVEMN- 361
I G C GR EA G+ + + G+ P V+YS++I FCK G G A YE M++M
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 362 --EKEIRGVLM 370
+ I GVL+
Sbjct: 458 PPDVVIYGVLV 468
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 9/227 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M R ++ D +IH+ ++ A K + +I+ P + TYN ++ YC R
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ EA I ++ P+ + TI+ + ++D A+ + M EKG P+A TY
Sbjct: 623 LDEAERIFELLKVTPFGPNT-VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 681
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL-HDAIKG 286
L+ + +F LF EM G+S +Y+ +++ C G + ++ H AI
Sbjct: 682 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 741
Query: 287 FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPD 333
+ P +V Y LI G+C +GR EA + M G+ PD
Sbjct: 742 -------KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 124/324 (38%), Gaps = 71/324 (21%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
KG+ LD ++S I ++ ++ A V M+ +G SP+V TY L++ C++ R+
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 170 EAAGILRVMADRGLS-----------------------------------PDVDIYNTII 194
EA G+ + RG+ PDV IY ++
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 195 TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
Q L L A+ F KM+ + I + ++ LI C R EA +FR M G+
Sbjct: 469 DGLSKQGLMLH-AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 255 STGEPAYTSLMNAFCLEGEFSK----------------------------VFHL------ 280
+T++M +E F K V HL
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 587
Query: 281 -HDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYST 339
DA K F + P +VTYN +I G+C + R +EA I + P+ V+ +
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 340 VISRFCKIGEPGMAYELMVEMNEK 363
+I CK + A + M EK
Sbjct: 648 LIHVLCKNNDMDGAIRMFSIMAEK 671
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 124/308 (40%), Gaps = 39/308 (12%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
+ L +G M M + + L+ + SLI +C D+A KV M G
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 149 SPSVATYNKLVR------AYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
P VAT+ ++R A+C+ + + +M +S D+ + N +I
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH- 586
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
++ A +F ++E + P TY+ +I C RRL EA +F + T
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 263 SLMNAFCLEGEFSKVFHLHD--AIKGFLPDFVTR-------------------------- 294
L++ C + + A KG P+ VT
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 295 -FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG---EP 350
SPS+V+Y+ +I G C GR +EA I + L PD V+Y+ +I +CK+G E
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Query: 351 GMAYELMV 358
+ YE M+
Sbjct: 767 ALLYEHML 774
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 204 LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS-TGEPAYT 262
+D ALE + G++ D+ ++ SL R+ D F ++ RGG+ +G A+
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHG 221
Query: 263 SLMNAFCLEGEFSKVFHLH----------------DAIKGFLPDFVTRFS---------- 296
+++A +GE +K H +KG D + S
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG 281
Query: 297 --PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
P++VT+ LI G C G + A + + M + G+ PD ++YST+I + K G GM +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 355 ELMVEMNEKEIR 366
+L + K ++
Sbjct: 342 KLFSQALHKGVK 353
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 42 GNLQPE----SNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGR 97
G ++P+ + + G +L+ E + RI E+ K G + T I LC
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAE--RIFELL-KVTPFGPNTVTLTILIHVLCKNND 657
Query: 98 MXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNK 157
M M KG + TY L+ F +++ ++K+ EM ++G SPS+ +Y+
Sbjct: 658 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 717
Query: 158 LVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
++ C+ RV EA I D L PDV Y +I
Sbjct: 718 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 27/267 (10%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M + G D T+TSL++ +CH ++ A + +++ GF P+V TY L+R C+
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIIT-------WGGDQELELDTALEFKAKMVEKGIL 220
+ A + M G P+V YN ++T WG L D M+++ I
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRD--------MMKRRIE 255
Query: 221 PHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG---EFSKV 277
P+ T++ LI + +L EA +L+ M++ + Y SL+N C+ G E ++
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 278 FHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSY 337
F+L + + P+ V Y LI+G C R E+ + I M++ G+ + ++Y
Sbjct: 316 FYLMERNGCY---------PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 338 STVISRFCKIGEPGMAYELMVEMNEKE 364
+ +I +C +G P +A E+ +M+ +
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 32/319 (10%)
Query: 77 QKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
+ LV+F T+ + C R+ + G + TYT+LI C ++ A
Sbjct: 150 EPDLVTF--TSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW 196
++ ++M G P+V TYN LV CE R +AA +LR M R + P+V + +I
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALID- 266
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
+ +L A E M++ + P TY LI LC L EA +F M R G
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 257 GEPAYTSLMNAFC----------------LEGEFSKVFHLHDAIKGFL----PDFVT--- 293
E YT+L++ FC +G + I+G+ PD
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 294 ------RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
R P + TYN L+ G CC G+ E+AL I M + + + V+Y+ +I CK+
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 348 GEPGMAYELMVEMNEKEIR 366
G+ A++L + K ++
Sbjct: 447 GKVEDAFDLFCSLFSKGMK 465
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 8/233 (3%)
Query: 65 VGRIREVAEKTNQKGLVS-----FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
VG++ E E N +S F + I LC G + M R G ++
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
YT+LIH FC + V+ K+ EM +G + TY L++ YC R A + M+
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
R PD+ YN ++ G +++ AL M ++ + + TY+ +I +C ++
Sbjct: 391 SRRAPPDIRTYNVLLD-GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPD 290
+AFDLF + G+ YT++++ FC G + L +K GFLP+
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 138/333 (41%), Gaps = 20/333 (6%)
Query: 12 NKVTMMLRVKTILRNRLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGR---- 67
N VT ++ + +NR L V + F G N V+ +N ++GR
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVEL--FNQMGTNGSRPNVVT--YNALVTGLCEIGRWGDA 242
Query: 68 ---IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLI 124
+R++ ++ + +++F TA I G++ M + + D TY SLI
Sbjct: 243 AWLLRDMMKRRIEPNVITF--TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 125 HMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLS 184
+ C +D+A ++ M G P+ Y L+ +C+ RV + I M+ +G+
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 185 PDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFD 244
+ Y T++ G D A E +M + P TY+ L+ LC ++ +A
Sbjct: 361 ANTITY-TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 245 LFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNA 304
+F M + + YT ++ C G+ + DA F F P+++TY
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGK------VEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 305 LIYGHCCMGRFEEALGILRGMAEMGLSPDAVSY 337
+I G C G EA + + M E G P+ Y
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 33/243 (13%)
Query: 151 SVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEF 210
+ ++Y K++R + +A + M P + + +++ D +
Sbjct: 47 AFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMN-RYDVVISL 105
Query: 211 KAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCL 270
+M GI P T + ++ +C + A +M++ G +TSL+N +C
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH 165
Query: 271 EGEFSKVFHLHDAI--KGFLPDFVTRFS---------------------------PSLVT 301
L D I GF P+ VT + P++VT
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225
Query: 302 YNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG---EPGMAYELMV 358
YNAL+ G C +GR+ +A +LR M + + P+ ++++ +I F K+G E Y +M+
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 359 EMN 361
+M+
Sbjct: 286 QMS 288
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 11/289 (3%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V+ N+ + C R+ M G D T+T+LIH + +A +
Sbjct: 148 IVTLNSL--LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
+ M+ RG P + TY +V C+ A +L M + +V IY+T+I
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
E D AL +M KG+ P+ TYS LI LC R S+A L +M+ ++
Sbjct: 266 YRHE-DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEA 318
+++L++AF +G+ K L++ + + R P++ TY++LI G C + R EA
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYE-------EMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
+L M P+ V+Y+T+I+ FCK EL EM+++ + G
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 13/271 (4%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ I LC M KG+ + TY+SLI C+ A ++LS+MI+
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
R +P++ T++ L+ A+ ++ ++ +A + M R + P++ Y+++I G L
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN-GFCMLDRLG 375
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A + M+ K LP+ TY+ LI C +R+ + +LFREM + GL YT+L+
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 266 NAFCLEGEFSKVFHLHDAIKG---FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+ F F D F P+++TYN L+ G C G+ +A+ +
Sbjct: 436 HGF---------FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
+ + PD +Y+ +I CK G+ M
Sbjct: 487 EYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 7/254 (2%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G++ + TY LI+ FC + A +L +M+ G+ P + T N L+ +C +R+ +A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
++ M + G PD + T+I G + A+ +MV++G P TY ++
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLI-HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
LC A +L +M + Y++++++ C K H DA+ F
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC------KYRHEDDALNLFTEME 280
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
P+++TY++LI C GR+ +A +L M E ++P+ V++S +I F K G+
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 352 MAYELMVEMNEKEI 365
A +L EM ++ I
Sbjct: 341 KAEKLYEEMIKRSI 354
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 126/260 (48%), Gaps = 10/260 (3%)
Query: 58 KARTEKD-VGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALD 116
K R E D + E+ K + ++++ ++ I LC GR M + + +
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITY--SSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
T+++LI F + ++ KA K+ EMI R P++ TY+ L+ +C DR+ EA +L
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 177 VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
+M + P+V YNT+I G + +D +E +M ++G++ + TY+ LI
Sbjct: 383 LMIRKDCLPNVVTYNTLIN-GFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 237 RRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS 296
R A +F++M+ G+ Y L++ C G+ +K + + ++ +
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR------STME 495
Query: 297 PSLVTYNALIYGHCCMGRFE 316
P + TYN +I G C G+++
Sbjct: 496 PDIYTYNIMIEGMCKAGKWK 515
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 11/237 (4%)
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
E+D A + M PS+ ++KL+ A + ++ M G+S ++ YN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
+I + L AL KM++ G P T + L+ C R+S+A L +M+
Sbjct: 118 ILINCFC-RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGH 309
G +T+L++ L + S+ L D + +G PD LVTY A++ G
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPD--------LVTYGAVVNGL 228
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
C G + AL +L M + + V YSTVI CK A L EM K +R
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 14/237 (5%)
Query: 146 RGFSPSVA-TYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
R FS + Y +++R + + +A G+ VMA P + ++ +++ +
Sbjct: 36 RAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMN-KF 94
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
D + F KM GI + TY+ LI C RLS A L +M++ G SL
Sbjct: 95 DLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSL 154
Query: 265 MNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+N FC S L D + G+ PD VT+ LI+G + EA+ ++
Sbjct: 155 LNGFCHGNRISDAVALVDQMVEMGYKPD--------TVTFTTLIHGLFLHNKASEAVALI 206
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG--VLMKSCINHL 377
M + G PD V+Y V++ CK G+ +A L+ +M +I V+ + I+ L
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 117/245 (47%), Gaps = 8/245 (3%)
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA-GIL 175
Q+ Y +++ + + +++ A+K M + G P+VA+ N L++A C D +A I
Sbjct: 121 QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
M RG PD Y T+I+ G + +D A + +MVEK P TY+ LI LC
Sbjct: 181 LEMPKRGCDPDSYTYGTLIS-GLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
+ + EA EM G+ Y+SLM+ C +G + L + +
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM------MARGC 293
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
P++VTY LI G C + +EA+ +L M GL PDA Y VIS FC I + A
Sbjct: 294 RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAAN 353
Query: 356 LMVEM 360
+ EM
Sbjct: 354 FLDEM 358
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M ++G D TY +LI C +D+A K+ +EM+++ +P+V TY L+ C
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V EA L M +G+ P+V Y++++ G ++ A+E M+ +G P+ TY+
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMD-GLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA--IK 285
LI LC E+++ EA +L M GL Y +++ FC +F + + D +
Sbjct: 302 TLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG 361
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
G P+ +T ++ + T N ++ G C A + M G+S + + +++ C
Sbjct: 362 GITPNRLT-WNIHVKTSNEVVRG-LCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 346 KIGEPGMAYELMVEM 360
K GE A +L+ E+
Sbjct: 420 KKGEFQKAVQLVDEI 434
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 15/267 (5%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
S+ I LC GR+ M K A TYTSLI+ C + VD+A + L
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLE 251
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
EM +G P+V TY+ L+ C++ R +A + +M RG P++ Y T+IT G +E
Sbjct: 252 EMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT-GLCKE 310
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
++ A+E +M +G+ P A Y +I C + EA + EM+ GG++ +
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Query: 262 -------TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR 314
++ C S+ F L+ +++ S + T +L+ C G
Sbjct: 371 NIHVKTSNEVVRGLCANYP-SRAFTLYLSMRS------RGISVEVETLESLVKCLCKKGE 423
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVI 341
F++A+ ++ + G P ++ +I
Sbjct: 424 FQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 6/226 (2%)
Query: 136 AYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT 195
+ +V +M D PS Y ++ EE+++ A + M + GL P V N +I
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 196 WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS 255
+ +D L+ +M ++G P + TY LI LC R+ EA LF EM+ +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 256 TGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRF 315
YTSL+N C + + +K P++ TY++L+ G C GR
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKS------KGIEPNVFTYSSLMDGLCKDGRS 278
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN 361
+A+ + M G P+ V+Y+T+I+ CK + A EL+ MN
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 10/211 (4%)
Query: 158 LVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK 217
+ R Y R ++ + M D P Y T++ +E +L+ A +F M E
Sbjct: 92 ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILV-EENQLNLAFKFYKNMREI 150
Query: 218 GILPHADTYSWLIVSLCFERRLSEA-FDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSK 276
G+ P + + LI +LC +A +F EM + G Y +L++ C G
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRI-- 208
Query: 277 VFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAV 335
D K + V + +P++VTY +LI G C +EA+ L M G+ P+
Sbjct: 209 -----DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVF 263
Query: 336 SYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+YS+++ CK G A EL M + R
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCR 294
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 125/258 (48%), Gaps = 7/258 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ + YT I C ++++A K+ M G P++ TY+ ++ YC+
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
VR+A G+ + + L P+V ++ T++ G + EL TA MV+ G+ P+ Y+
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVD-GFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI C + EA L EM LS YT L+N C+E + ++ L +K
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN- 402
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
R PS TYN+LI+G+C E+AL + M G+ P+ +++ST+I +C +
Sbjct: 403 -----ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV 457
Query: 348 GEPGMAYELMVEMNEKEI 365
+ A L EM K I
Sbjct: 458 RDIKAAMGLYFEMTIKGI 475
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 18/297 (6%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
+ +A I C G + + L + + +L+ FC E+ A +
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M+ G P++ YN L+ +C+ + EA G+L M LSPDV Y TI+ G E
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTY-TILINGLCIED 388
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
++ A KM + I P + TY+ LI C E + +A DL EM G+ ++
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 263 SLMNAFCLEGEFSKVFHLHD--AIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
+L++ +C + L+ IKG +PD +VTY ALI H +EAL
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPD--------VVTYTALIDAHFKEANMKEALR 500
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLMKSCINHL 377
+ M E G+ P+ +++ ++ F K G +A + E N++ +SC NH+
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ-------RSCWNHV 550
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 128/281 (45%), Gaps = 7/281 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I DLC +M M + G+ + TY+++I +C V +AY + E++
Sbjct: 238 TIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILV 297
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
P+V + LV +C+ + A + M G+ P++ +YN +I G + +
Sbjct: 298 AELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH-GHCKSGNML 356
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A+ ++M + P TY+ LI LC E +++EA LF++M + Y SL+
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ +C E + L + + P+++T++ LI G+C + + A+G+ M
Sbjct: 417 HGYCKEYNMEQALDLCSEMTA------SGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
G+ PD V+Y+ +I K A L +M E I
Sbjct: 471 TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 7/253 (2%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I C G M M L+ D TYT LI+ C +++V +A ++ +M +
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
PS ATYN L+ YC+E + +A + M G+ P++ ++T+I G ++ A+
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID-GYCNVRDIKAAM 464
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+M KGI+P TY+ LI + E + EA L+ +ML G+ + + L++ F
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
EG S AI + + R + V + LI G C G A M
Sbjct: 525 WKEGRLSV------AIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSC 578
Query: 329 GLSPDAVSYSTVI 341
G++PD SY +++
Sbjct: 579 GITPDICSYVSML 591
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D + S+++ + D + MI RG P V Y L + ++ + +L
Sbjct: 163 DSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLL 222
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVE----KGILPHADTYSWLIV 231
M G+ P+V IY I +L D +E KM E G+LP+ TYS +I
Sbjct: 223 DEMTSLGIKPNVYIYTIYIL-----DLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMID 277
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
C + +A+ L++E+L L + +L++ FC E L + F D
Sbjct: 278 GYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD- 336
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
P+L YN LI+GHC G EA+G+L M + LSPD +Y+ +I+ C +
Sbjct: 337 -----PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 352 MAYELMVEMNEKEI 365
A L +M + I
Sbjct: 392 EANRLFQKMKNERI 405
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 8/262 (3%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F T I LC + ++ M + + TY SLIH +C + +++A + SE
Sbjct: 375 FTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSE 434
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M G P++ T++ L+ YC ++ A G+ M +G+ PDV Y +I +E
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID-AHFKEA 493
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+ AL + M+E GI P+ T++ L+ E RLS A D ++E + +T
Sbjct: 494 NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFT 553
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
L+ C G + ++ +P + +Y +++ GH R + + +
Sbjct: 554 CLIEGLCQNGYILRASRFFSDMRS------CGITPDICSYVSMLKGHLQEKRITDTMMLQ 607
Query: 323 RGMAEMGLSPDAVSYSTVISRF 344
M + G+ P+ + + +++RF
Sbjct: 608 CDMIKTGILPNLL-VNQLLARF 628
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 151/325 (46%), Gaps = 18/325 (5%)
Query: 43 NLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNAT--ATIQDLCGKGRMXX 100
N+ P++ + L + + + E+ EK ++KG+ ++ C +G
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 101 XXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVR 160
M +KG+ + Y +L+ + +++ + +EM D+G PS ATYN L+
Sbjct: 363 ALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 161 AYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGIL 220
AY + +LR M D GL P+V Y +I+ G + D A + +M + G+
Sbjct: 423 AYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLK 482
Query: 221 PHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFH- 279
P + +Y+ LI + +A+ F EM + G+ YTS+++AF G+ K+
Sbjct: 483 PSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Query: 280 ----LHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAV 335
L + IKG TR +TYN L+ G G + EA ++ ++MGL P +
Sbjct: 543 WKLMLREKIKG------TR-----ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVM 591
Query: 336 SYSTVISRFCKIGEPGMAYELMVEM 360
+Y+ +++ + + G+ +L+ EM
Sbjct: 592 TYNMLMNAYARGGQDAKLPQLLKEM 616
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 111/234 (47%), Gaps = 10/234 (4%)
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW 196
+++ +M ++G S + LV+++C+E EA I M +G+ + +YNT++
Sbjct: 329 WEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD- 387
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAF--DLFREMLRGGL 254
++ ++ +M +KG+ P A TY+ L+ + + RR+ L REM GL
Sbjct: 388 AYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDA--YARRMQPDIVETLLREMEDLGL 445
Query: 255 STGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR 314
+YT L++A+ + S + A FL PS +Y ALI+ + G
Sbjct: 446 EPNVKSYTCLISAYGRTKKMSDM-----AADAFLRMKKVGLKPSSHSYTALIHAYSVSGW 500
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGV 368
E+A M + G+ P +Y++V+ F + G+ G E+ M ++I+G
Sbjct: 501 HEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGT 554
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY +L+ F Q +A V+SE G PSV TYN L+ AY + + +L+ M
Sbjct: 557 TYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM 616
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
A L PD Y+T+I + + + A + MV+ G +P +Y L
Sbjct: 617 AALNLKPDSITYSTMI-YAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 10/266 (3%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKG-LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI 144
+A + LC +GRM M KG D TYT++++ FC EVDKA K+L M
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 481
Query: 145 DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
G P+ +Y L+ C + EA ++ + + SP+ Y ++I G +E +L
Sbjct: 482 THGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITY-SVIMHGLRREGKL 540
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
A + +MV KG P + L+ SLC + R EA E L G + +T++
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPD-FVTRFSPSLVTYNALIYGHCCMGRFEEALGILR 323
++ FC E DA L D ++ + TY L+ GR EA +++
Sbjct: 601 IHGFCQNDEL-------DAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMK 653
Query: 324 GMAEMGLSPDAVSYSTVISRFCKIGE 349
M G+ P V+Y TVI R+C++G+
Sbjct: 654 KMLHKGIDPTPVTYRTVIHRYCQMGK 679
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 9/264 (3%)
Query: 96 GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATY 155
G++ M R G+ + + I +F ++KA + L M G P+V TY
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 156 NKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMV 215
N ++R YC+ RV EA +L M +G PD Y TI+ + ++ ++ K
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 216 EKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFS 275
E G++P TY+ LI L EA ++ G + Y+++++A C EG S
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 276 KVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPD 333
+ L + + KG P P +VTY A++ G C +G ++A +L+ M G P+
Sbjct: 436 EAKDLINEMLSKGHCP-------PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Query: 334 AVSYSTVISRFCKIGEPGMAYELM 357
VSY+ +++ C+ G+ A E+M
Sbjct: 489 TVSYTALLNGMCRTGKSLEAREMM 512
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 126/283 (44%), Gaps = 40/283 (14%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ + TY +I +C V++A ++L +M +G P +Y ++ C+E R+ E
Sbjct: 307 GIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEV 366
Query: 172 AGILRVMA-DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
+++ MA + GL PD YNT+I + D AL F EKG YS ++
Sbjct: 367 RDLMKKMAKEHGLVPDQVTYNTLIHMLTKHD-HADEALWFLKDAQEKGFRIDKLGYSAIV 425
Query: 231 VSLCFERRLSEAFDLFREML-RGGLSTGEPAYTSLMNAFCLEGEFSK------VFHLHDA 283
+LC E R+SEA DL EML +G YT+++N FC GE K V H H
Sbjct: 426 HALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH-- 483
Query: 284 IKGFLPDFVTR---------------------------FSPSLVTYNALIYGHCCMGRFE 316
G P+ V+ +SP+ +TY+ +++G G+
Sbjct: 484 --GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLS 541
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
EA ++R M G P V + ++ C+ G A + M E
Sbjct: 542 EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 10/257 (3%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF-SPSVATYNKLVRAYCEEDRVR 169
KG +D+ Y++++H C + + +A +++EM+ +G P V TY +V +C V
Sbjct: 412 KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVD 471
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
+A +L+VM G P+ Y ++ L+ A E E P++ TYS +
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE-AREMMNMSEEHWWSPNSITYSVI 530
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
+ L E +LSEA D+ REM+ G G L+ + C +G H+A K F+
Sbjct: 531 MHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGR------THEARK-FME 583
Query: 290 DFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+ + + + ++V + +I+G C + AL +L M + D +Y+T++ K G
Sbjct: 584 ECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKG 643
Query: 349 EPGMAYELMVEMNEKEI 365
A ELM +M K I
Sbjct: 644 RIAEATELMKKMLHKGI 660
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 11/257 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M R+G+ ++ ++ + ++ A KVL+ M G P++ N + + +R
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +A L M G+ P+V YN +I D ++ A+E M KG LP +Y
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLH-RVEEAIELLEDMHSKGCLPDKVSYY 351
Query: 228 WLIVSLCFERRLSEAFDLFREMLR-GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG 286
++ LC E+R+ E DL ++M + GL + Y +L++ +K H +A+
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM------LTKHDHADEAL-W 404
Query: 287 FLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG-LSPDAVSYSTVISRF 344
FL D + F + Y+A+++ C GR EA ++ M G PD V+Y+ V++ F
Sbjct: 405 FLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGF 464
Query: 345 CKIGEPGMAYELMVEMN 361
C++GE A +L+ M+
Sbjct: 465 CRLGEVDKAKKLLQVMH 481
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D Y S++ + + + +VL M RG + +++++ +Y ++R+A +L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+M G+ P++ I NT I L+ AL F +M GI+P+ TY+ +I C
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRAN-RLEKALRFLERMQVVGIVPNVVTYNCMIRGYCD 324
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
R+ EA +L +M G + +Y ++M C E ++ + D +K +
Sbjct: 325 LHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKE---KRIVEVRDLMKKMAKEH--GL 379
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
P VTYN LI+ +EAL L+ E G D + YS ++ CK G A +
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD 439
Query: 356 LMVEMNEK 363
L+ EM K
Sbjct: 440 LINEMLSK 447
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 13/281 (4%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
+ + TA + +C G+ + + TY+ ++H + ++ +A V+
Sbjct: 489 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVR 548
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
EM+ +GF P N L+++ C + R EA + ++G + +V + T+I G Q
Sbjct: 549 EMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI-HGFCQN 607
Query: 202 LELDTALEFKAKMVEKGILPHAD--TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
ELD AL M I HAD TY+ L+ +L + R++EA +L ++ML G+
Sbjct: 608 DELDAALSVLDDMYL--INKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPV 665
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
Y ++++ +C G+ D + L ++R YN +I C +G+ EEA
Sbjct: 666 TYRTVIHRYCQMGKV-------DDLVAILEKMISR-QKCRTIYNQVIEKLCVLGKLEEAD 717
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
+L + DA + ++ + K G P AY++ M
Sbjct: 718 TLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRM 758
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 5/205 (2%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+RE+ K G V N +Q LC GR KG A++ +T++IH F
Sbjct: 547 VREMVLKGFFPGPVEINLL--LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 604
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C +E+D A VL +M V TY LV ++ R+ EA +++ M +G+ P
Sbjct: 605 CQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTP 664
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y T+I Q ++D + KM+ + Y+ +I LC +L EA L
Sbjct: 665 VTYRTVIHRYC-QMGKVDDLVAILEKMISRQKC--RTIYNQVIEKLCVLGKLEEADTLLG 721
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEG 272
++LR + +LM + +G
Sbjct: 722 KVLRTASRSDAKTCYALMEGYLKKG 746
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 127/265 (47%), Gaps = 15/265 (5%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D TY LI+ C + + + A L E +G P+ +Y L++AYC+ A+ +L
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
MA+RG PD+ Y +I G +D A+ K K++++G+ P A Y+ L+ LC
Sbjct: 404 LQMAERGCKPDIVTYGILIH-GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFS---KVFHLHDAIKGFLPDFV 292
R A LF EML + Y +L++ F G+F KVF L KG D
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL-SVEKGVKVD-- 519
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
+V +NA+I G C G +EAL + M E L PD +YST+I + K +
Sbjct: 520 ------VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 353 AYELM--VEMNEKEIRGVLMKSCIN 375
A ++ +E N+ + V S IN
Sbjct: 574 AIKIFRYMEKNKCKPNVVTYTSLIN 598
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 7/277 (2%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I LC +G+ ++KGL + +Y LI +C +E D A K+L +M +RG
Sbjct: 352 INRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P + TY L+ + +A + + DRG+SPD IYN +++ L L
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
F ++M+++ ILP A Y+ LI EA +F + G+ + +++ F
Sbjct: 472 LF-SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGF 530
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
C G + + + P TY+ +I G+ A+ I R M +
Sbjct: 531 CRSGMLDEALACMNRMNE------EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584
Query: 329 GLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
P+ V+Y+++I+ FC G+ MA E EM +++
Sbjct: 585 KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 16/325 (4%)
Query: 46 PESNKVSGLWNLKARTEKDVGRIREVAEKTNQKG--LVSFNATATIQDLCGKGRMXXXXX 103
P+ + L +L ++ + +G R+V ++ +G + +++ ++ +C +G++
Sbjct: 168 PDVIACNSLLSLLVKSRR-LGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 104 XXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYC 163
KG + Y ++I +C +++ AY V E+ +GF P++ T+ ++ +C
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 164 EEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHA 223
+E + +L + +RGL V N II ++D A E ++ P
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA-ESIGWIIANDCKPDV 345
Query: 224 DTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEF---SKVFHL 280
TY+ LI LC E + A E + GL +Y L+ A+C E+ SK+ L
Sbjct: 346 ATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL-L 404
Query: 281 HDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
A +G PD +VTY LI+G G ++A+ + + + G+SPDA Y+ +
Sbjct: 405 QMAERGCKPD--------IVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNML 456
Query: 341 ISRFCKIGEPGMAYELMVEMNEKEI 365
+S CK G A L EM ++ I
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNI 481
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 141/336 (41%), Gaps = 30/336 (8%)
Query: 27 RLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVS--FN 84
R LP K++ N+ P++ + L + R+ D R+V + +KG+ +
Sbjct: 465 RFLPAKLLFSEMLDR-NILPDAYVYATLIDGFIRS-GDFDEARKVFSLSVEKGVKVDVVH 522
Query: 85 ATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI 144
A I+ C G + MN + L D+ TY+++I + Q+++ A K+ M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 145 DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
P+V TY L+ +C + + A + M R L P+V Y T+I + L
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 205 DTALEFKAKMVEKGILPHADTYSWLI---VSLCFERRLSEA-----------FDLFREML 250
+ A+ + M+ +P+ T++ L+ V + L+E + F M
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMK 702
Query: 251 RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYG 308
G S AY S + C+ G D + KG FSP V++ A+++G
Sbjct: 703 SDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG--------FSPDPVSFAAILHG 754
Query: 309 HCCMGRFEEALGI-LRGMAEMGLSPDAVSYSTVISR 343
C +G ++ + + E GL AV YS V+ +
Sbjct: 755 FCVVGNSKQWRNMDFCNLGEKGLEV-AVRYSQVLEQ 789
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 115/301 (38%), Gaps = 45/301 (14%)
Query: 92 LCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS 151
LC GR M + + D Y +LI F + D+A KV S +++G
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
V +N +++ +C + EA + M + L PD Y+TII G ++ ++ TA++
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID-GYVKQQDMATAIKIF 578
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF--- 268
M + P+ TY+ LI C + A + F+EM L YT+L+ +
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 269 ------------------CLEGEFSKVFHLHDAIK------------------GFLPDFV 292
C+ E + L +K +F
Sbjct: 639 SSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFF 698
Query: 293 TR-----FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
R +S YN+ + C G + A M + G SPD VS++ ++ FC +
Sbjct: 699 HRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVV 758
Query: 348 G 348
G
Sbjct: 759 G 759
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 204 LDTALEFKAKMVE-KGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
L A+E +VE +P + L+ L RRL +A ++ EM G S +
Sbjct: 150 LSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTC 209
Query: 263 SLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
L+ C EG+ L + KG +P+ +V YN +I G+C +G E A
Sbjct: 210 ILVKGMCNEGKVEVGRKLIEGRWGKGCIPN--------IVFYNTIIGGYCKLGDIENAYL 261
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ + + G P ++ T+I+ FCK G+ + L+ E+ E+ +R
Sbjct: 262 VFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLR 307
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 141/322 (43%), Gaps = 34/322 (10%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
++++ +K + S+N + LC G + M R G+ D TY L+H +
Sbjct: 349 LKQMTDKGIGPSIYSYNIL--MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C +VD A +L EM+ P+ T N L+ + + R+ EA +LR M ++G D
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDT 466
Query: 188 DIYNTIITWGGDQELELDTALEFKAKM-----------------------VEKGILPHAD 224
N I+ G ELD A+E M +E LP
Sbjct: 467 VTCNIIVD-GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI 284
TYS L+ LC R +EA +LF EM+ L AY ++ FC +G+ S F +
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV---- 581
Query: 285 KGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
L D + SL TYN+LI G + E G++ M E G+SP+ +Y+T I
Sbjct: 582 ---LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 344 FCKIGEPGMAYELMVEMNEKEI 365
C+ + A L+ EM +K I
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNI 660
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 18/263 (6%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
++Y + + +A VL +M D+G PS+ +YN L+ C+ + +A I+ +
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M G+ PD Y ++ G ++D A +M+ LP+A T + L+ SL
Sbjct: 387 MKRNGVCPDAVTYGCLLH-GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF---------------HLHD 282
R+SEA +L R+M G +++ C GE K +L +
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505
Query: 283 AIKGFLPDFVTRFS--PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
+ G + D + + P L+TY+ L+ G C GRF EA + M L PD+V+Y+
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565
Query: 341 ISRFCKIGEPGMAYELMVEMNEK 363
I FCK G+ A+ ++ +M +K
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKK 588
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+A T+ LI C VD A ++ EM ++G P+ T+ LVR YC+ +
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+L M G+ P+ IYNTI++ +E D + + KM E+G++P T++ I
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVS-SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRIS 260
Query: 232 SLCFERRLSEAFDLFREM-LRGGLSTGEP---AYTSLMNAFCLEGEFSKVFHLHDAIKG- 286
+LC E ++ +A +F +M L L P Y ++ FC G L ++I+
Sbjct: 261 ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
Query: 287 -----------FLPDFVTR-----------------FSPSLVTYNALIYGHCCMGRFEEA 318
+L V PS+ +YN L+ G C +G +A
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
I+ M G+ PDAV+Y ++ +C +G+ A L+ EM
Sbjct: 381 KTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 20/283 (7%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ + LC GR M + L D Y IH FC Q ++ A++VL +M
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
+G S+ TYN L+ ++++ E G++ M ++G+SP++ YNT I + + E +++
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGE-KVE 646
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS---TGEPAYT 262
A +M++K I P+ ++ +LI + C ++ + FD+ +E+ +S E Y+
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFC---KVPD-FDMAQEVFETAVSICGQKEGLYS 702
Query: 263 SLMNAFCLEGEFSKVFHLHDAI--KGF-LPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
+ N G+ K L +A+ +GF L F+ Y L+ C E A
Sbjct: 703 LMFNELLAAGQLLKATELLEAVLDRGFELGTFL---------YKDLVESLCKKDELEVAS 753
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
GIL M + G D + VI K+G A +M E
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y L+ + V+ + +M+ G +P T+N L+RA C+ V A + M
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
++G P+ + I+ G + D LE M G+LP+ Y+ ++ S C E R
Sbjct: 175 EKGCKPNEFTFG-ILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN 233
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
++ + +M GL + S ++A C EG+ + ++ L +++ P+
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME--LDEYLGLPRPNS 291
Query: 300 VTYNALIYGHCCM-----------------------------------GRFEEALGILRG 324
+TYN ++ G C + G+F EA +L+
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQ 351
Query: 325 MAEMGLSPDAVSYSTVISRFCKIG 348
M + G+ P SY+ ++ CK+G
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLG 375
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 106/258 (41%), Gaps = 46/258 (17%)
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGF---SPSVATYNKLVRAYCEEDRVREAAGILRVM 178
S++ +F +DKA+ +++ F PSV YN L+ + +E RV
Sbjct: 80 SVVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVE--------- 129
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
++W MV GI P T++ LI +LC
Sbjct: 130 --------------FVSW-------------LYKDMVLCGIAPQTYTFNLLIRALCDSSC 162
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
+ A +LF EM G E + L+ +C G K L +A++ F P+
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESF------GVLPN 216
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
V YN ++ C GR +++ ++ M E GL PD V++++ IS CK G+ A +
Sbjct: 217 KVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFS 276
Query: 359 EMNEKEIRGVLMKSCINH 376
+M E G+ + I +
Sbjct: 277 DMELDEYLGLPRPNSITY 294
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 17/295 (5%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T+ I C + ++ M +GL + TYT+LI+ C +AY++++ M D
Sbjct: 362 TSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD 421
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
GF P++ TYN + + C++ R EA +L GL D Y +I Q +++
Sbjct: 422 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN-DIN 480
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
AL F +M + G + LI + C ++++ E+ LF+ ++ GL + YTS++
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 266 NAFCLEGEFS---KVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+ +C EG+ K FH + G +PD TY +LI G C +EA +
Sbjct: 541 SCYCKEGDIDLALKYFH-NMKRHGCVPDS--------FTYGSLISGLCKKSMVDEACKLY 591
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK----EIRGVLMKSC 373
M + GLSP V+ T+ +CK + A L+ +++K +R ++ K C
Sbjct: 592 EAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLC 646
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 6/268 (2%)
Query: 96 GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATY 155
GR+ M +GL T ++ + ++ A V EM RG P ++Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 156 NKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMV 215
+V + +++EA L M RG PD I+T + L ++ A+ + KM+
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL-VNRAIWYFRKMI 279
Query: 216 EKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFS 275
+ G P+ ++ LI LC + + +AF++ EM+R G +T+L++ C G
Sbjct: 280 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 339
Query: 276 KVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAV 335
K F L +K D + P++ TY ++I G+C + A + M E GL P+
Sbjct: 340 KAFRLF--LKLVRSD---TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 394
Query: 336 SYSTVISRFCKIGEPGMAYELMVEMNEK 363
+Y+T+I+ CK G G AYELM M ++
Sbjct: 395 TYTTLINGHCKAGSFGRAYELMNLMGDE 422
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 138/322 (42%), Gaps = 45/322 (13%)
Query: 77 QKGLVSFNATATI--QDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVD 134
Q+G + NAT T+ LC G + M G + +TSLI C + +
Sbjct: 245 QRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIK 304
Query: 135 KAYKVLSEMIDRG------------------------------------FSPSVATYNKL 158
+A+++L EM+ G + P+V TY +
Sbjct: 305 QAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSM 364
Query: 159 VRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKG 218
+ YC+ED++ A + M ++GL P+V+ Y T+I G + A E M ++G
Sbjct: 365 IGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN-GHCKAGSFGRAYELMNLMGDEG 423
Query: 219 ILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF 278
+P+ TY+ I SLC + R EA++L + GL YT L+ C + +
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQND----- 478
Query: 279 HLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYS 338
++ A+ F T F + N LI C + +E+ + + + +GL P +Y+
Sbjct: 479 -INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYT 537
Query: 339 TVISRFCKIGEPGMAYELMVEM 360
++IS +CK G+ +A + M
Sbjct: 538 SMISCYCKEGDIDLALKYFHNM 559
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 143/321 (44%), Gaps = 71/321 (22%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G A + T+ +LI+ FC + E+D+A+ + M RG P + Y+ L+ Y + +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 172 AGILRVMADRGLSPDVDIYNTII---TWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
+ +G+ DV ++++ I GD L TA +M+ +GI P+ TY+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGD----LATASVVYKRMLCQGISPNVVTYTI 396
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLH-DAIK-G 286
LI LC + R+ EAF ++ ++L+ G+ Y+SL++ FC G F L+ D IK G
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 287 FLPDFVT------------------RFSP---------SLVTYNALIYGHCCMGRFEEAL 319
+ PD V RFS ++V +N+LI G C + RF+EAL
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 320 GILRGMA-----------------------------------EMGLSPDAVSYSTVISRF 344
+ R M +MGL PDA++Y T+I F
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 345 CKIGEPGMAYELMVEMNEKEI 365
CK +P + +L M +I
Sbjct: 577 CKHMKPTIGLQLFDLMQRNKI 597
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 127/307 (41%), Gaps = 30/307 (9%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I+ LC GR+ + ++G+ TY+SLI FC + + + +MI
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G+ P V Y LV ++ + A M + + +V ++N++I G + D
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID-GWCRLNRFD 513
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
AL+ M GI P T++ ++ E RL EA LF M + GL AY +L+
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 266 NAFC-------------------LEGEFS----------KVFHLHDAIKGFLPDFVTRFS 296
+AFC + + + K + DA K F +
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P +VTYN +I G+C + R +EA I + P+ V+ + +I CK + A +
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 357 MVEMNEK 363
M EK
Sbjct: 694 FSIMAEK 700
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 9/227 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M R ++ D +IH+ ++ A K + +I+ P + TYN ++ YC R
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ EA I ++ P+ + TI+ + ++D A+ + M EKG P+A TY
Sbjct: 652 LDEAERIFELLKVTPFGPNT-VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 710
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL-HDAIKG 286
L+ + +F LF EM G+S +Y+ +++ C G + ++ H AI
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 287 FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPD 333
+ P +V Y LI G+C +GR EA + M G+ PD
Sbjct: 771 -------KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 111/267 (41%), Gaps = 10/267 (3%)
Query: 95 KGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVAT 154
+GR+ M + GL D Y +LI FC + ++ M S +A
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 155 YNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKM 214
N ++ + R+ +A+ + + + PD+ YNT+I G LD A +
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC-GYCSLRRLDEAERIFELL 662
Query: 215 VEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEF 274
P+ T + LI LC + A +F M G Y LM+ F +
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 722
Query: 275 SKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDA 334
F L + ++ SPS+V+Y+ +I G C GR +EA I + L PD
Sbjct: 723 EGSFKLFEEMQE------KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776
Query: 335 VSYSTVISRFCKIG---EPGMAYELMV 358
V+Y+ +I +CK+G E + YE M+
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHML 803
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 204 LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS-TGEPAYT 262
+D ALE + G++ D+ ++ SL R+ D F ++ RGG+ +G A+
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHG 221
Query: 263 SLMNAFCLEGEFSKVFHLH----------------DAIKGFLPDFVTRFS---------- 296
+++A +GE +K H +KG D + S
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG 281
Query: 297 --PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
P++VT+ LI G C G + A + + M + G+ PD ++YST+I + K G GM +
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 355 ELMVEMNEKEIR 366
+L + K ++
Sbjct: 342 KLFSQALHKGVK 353
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
Query: 42 GNLQPE----SNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGR 97
G ++P+ + + G +L+ E + RI E+ K G + T I LC
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAE--RIFELL-KVTPFGPNTVTLTILIHVLCKNND 686
Query: 98 MXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNK 157
M M KG + TY L+ F +++ ++K+ EM ++G SPS+ +Y+
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 158 LVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
++ C+ RV EA I D L PDV Y +I
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 118/248 (47%), Gaps = 10/248 (4%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D T+ +L++ +C V +A + ++ +I G P TY + +C V A +
Sbjct: 154 DIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVF 213
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+ M G + Y +I +G + ++D AL KM + P+ TY+ LI +LC
Sbjct: 214 KEMTQNGCHRNEVSYTQLI-YGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR- 294
+ SEA +LF++M G+ + YT L+ +FC D G L +
Sbjct: 273 SGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTL-------DEASGLLEHMLENG 325
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
P+++TYNALI G C +A+G+L M E L PD ++Y+T+I+ C G AY
Sbjct: 326 LMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAY 384
Query: 355 ELMVEMNE 362
L+ M E
Sbjct: 385 RLLSLMEE 392
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 117/267 (43%), Gaps = 16/267 (5%)
Query: 70 EVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCH 129
E+ E + +FN + C G + + + G D TYTS I C
Sbjct: 145 EMLEDLVSPDIYTFNTL--VNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCR 202
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
++EVD A+KV EM G + +Y +L+ E ++ EA +L M D P+V
Sbjct: 203 RKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRT 262
Query: 190 YNTIIT--WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y +I G Q+ E A+ +M E GI P Y+ LI S C L EA L
Sbjct: 263 YTVLIDALCGSGQKSE---AMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALI 306
ML GL Y +L+ FC + ++H A+ G L + + P L+TYN LI
Sbjct: 320 HMLENGLMPNVITYNALIKGFCKK-------NVHKAM-GLLSKMLEQNLVPDLITYNTLI 371
Query: 307 YGHCCMGRFEEALGILRGMAEMGLSPD 333
G C G + A +L M E GL P+
Sbjct: 372 AGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I LCG G+ M+ G+ D YT LI FC + +D+A +L M++
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLE 323
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G P+V TYN L++ +C+++ V +A G+L M ++ L PD+ YNT+I G LD
Sbjct: 324 NGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIA-GQCSSGNLD 381
Query: 206 TALEFKAKMVEKGILPHADT 225
+A + M E G++P+ T
Sbjct: 382 SAYRLLSLMEESGLVPNQRT 401
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 89/252 (35%), Gaps = 77/252 (30%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
L + Y +L+ V++ ++ +EM++ SP + T+N LV YC+ V EA
Sbjct: 118 LTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEA--- 174
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
+TW +++ G P TY+ I C
Sbjct: 175 ----------------KQYVTW-----------------LIQAGCDPDYFTYTSFITGHC 201
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
+ + AF +F+EM + G E
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNE------------------------------------ 225
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
V+Y LIYG + +EAL +L M + P+ +Y+ +I C G+ A
Sbjct: 226 -----VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAM 280
Query: 355 ELMVEMNEKEIR 366
L +M+E I+
Sbjct: 281 NLFKQMSESGIK 292
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 11/261 (4%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ L++ +S C + +KA+ V+ EMI +GF P +TY+K++ C ++ A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+ M GL DV Y ++ L ++ A ++ +M E G P+ TY+ LI
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGL-IEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF--LP 289
+ +++S A +LF ML G Y++L++ C G+ K + + + G +P
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 290 DFVTRFS--------PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
D F P++VTY AL+ G C R EEA +L M+ G P+ + Y +I
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 342 SRFCKIGEPGMAYELMVEMNE 362
CK+G+ A E+ EM+E
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSE 702
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 139/323 (43%), Gaps = 29/323 (8%)
Query: 59 ARTEKDVGRIREVAEKTNQKGLVSFNATAT--IQDLCGKGRMXXXXXXXXXMNRKGLALD 116
+ EK IRE+ +G + +T + + LC +M M R GL D
Sbjct: 462 GKYEKAFSVIREMI----GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
TYT ++ FC +++A K +EM + G +P+V TY L+ AY + +V A +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 177 VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHAD------------ 224
M G P++ Y+ +I G + +++ A + +M +P D
Sbjct: 578 TMLSEGCLPNIVTYSALID-GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 225 ----TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL 280
TY L+ C R+ EA L M G + Y +L++ C G+ + +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 281 HDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
+ F +L TY++LI + + R + A +L M E +P+ V Y+ +
Sbjct: 697 KTEMSEH------GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 341 ISRFCKIGEPGMAYELMVEMNEK 363
I CK+G+ AY+LM M EK
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEK 773
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 23/310 (7%)
Query: 73 EKTNQKGLVS--FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQ 130
E+ + GLV+ + T + C G + M G + TYT+LIH +
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566
Query: 131 EEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIY 190
++V A ++ M+ G P++ TY+ L+ +C+ +V +A I M PDVD+Y
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Query: 191 ----------NTIITWGG-----DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
++T+G + ++ A + M +G P+ Y LI LC
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK 686
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
+L EA ++ EM G Y+SL++ + KV A K
Sbjct: 687 VGKLDEAQEVKTEMSEHGFPATLYTYSSLID------RYFKVKRQDLASKVLSKMLENSC 740
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
+P++V Y +I G C +G+ +EA +++ M E G P+ V+Y+ +I F IG+ E
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 356 LMVEMNEKEI 365
L+ M K +
Sbjct: 801 LLERMGSKGV 810
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 131/308 (42%), Gaps = 37/308 (12%)
Query: 87 ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR 146
A I LC G++ M+ G TY+SLI + + D A KVLS+M++
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 147 GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDT 206
+P+V Y +++ C+ + EA ++++M ++G P+V Y +I G +++T
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID-GFGMIGKIET 797
Query: 207 ALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMN 266
LE +M KG+ P+ TY LI C L A +L EM + T Y ++
Sbjct: 798 CLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE 857
Query: 267 AFCLEGEFSKVFHLHDAI-----KGFLPDF----------------------VTRFSPSL 299
F EF + L D I FL + V FS +L
Sbjct: 858 GF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 300 V----TYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS---RFCKIGEPGM 352
V TYN+LI C + E A + M + G+ P+ S+ ++I R KI E +
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Query: 353 AYELMVEM 360
+ + M
Sbjct: 976 LLDFISHM 983
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 46/282 (16%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY++L+ +++++ + +VL+ M+ G PS +N LV AYC A +L+ M
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398
Query: 179 ADRGLSPDVDIYNTII-TWGGDQE------LEL--------------------------- 204
G P +YN +I + GD++ L+L
Sbjct: 399 VKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCL 458
Query: 205 ------DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE 258
+ A +M+ +G +P TYS ++ LC ++ AF LF EM RGGL
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 259 PAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEA 318
YT ++++FC G + A K F +P++VTY ALI+ + + A
Sbjct: 519 YTYTIMVDSFCKAG------LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
+ M G P+ V+YS +I CK G+ A ++ M
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 6/247 (2%)
Query: 39 AAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRM 98
+ A N+ + + GL + +T++ ++ + EK Q +V++ TA I G++
Sbjct: 739 SCAPNVVIYTEMIDGLCKV-GKTDEAYKLMQMMEEKGCQPNVVTY--TAMIDGFGMIGKI 795
Query: 99 XXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKL 158
M KG+A + TY LI C +D A+ +L EM + A Y K+
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 159 VRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-TWGGDQELELDTALEFKAKMVEK 217
+ + +E E+ G+L + +P + +Y +I Q LE+ L +
Sbjct: 856 IEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 218 GILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKV 277
++ ++ TY+ LI SLC ++ AF LF EM + G+ ++ SL+ + S+
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Query: 278 FHLHDAI 284
L D I
Sbjct: 974 LLLLDFI 980
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 115/305 (37%), Gaps = 68/305 (22%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
L+ C A + L + D F PS +TYN L++A+ + DR+ A+ I R M+
Sbjct: 206 LVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLAN 265
Query: 183 LS--------------------------------PDVDIYNTIITWGGDQELELDTALEF 210
L PD Y +I+ + L + A++F
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASL-FEEAMDF 324
Query: 211 KAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCL 270
+M LP+ TYS L+ +++L + M+ G + SL++A+C
Sbjct: 325 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384
Query: 271 EGEFSKVFHLHDAIK--GFLPDFVT-------------------------RFSPSL---- 299
G+ S + L + G +P +V +S L
Sbjct: 385 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444
Query: 300 ----VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
+ ++ C G++E+A ++R M G PD +YS V++ C + +A+
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 356 LMVEM 360
L EM
Sbjct: 505 LFEEM 509
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 144/315 (45%), Gaps = 9/315 (2%)
Query: 62 EKDVGRIREVAEKTNQKGLVSFNAT-ATIQDLCGK-GRMXXXXXXXXXMNRKGLALDQRT 119
E DV R + E+ +GLV T ++ D GK GR+ M D T
Sbjct: 275 EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVIT 334
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y +LI+ FC ++ + EM G P+V +Y+ LV A+C+E +++A M
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
GL P+ Y ++I + L A +M++ G+ + TY+ LI LC R+
Sbjct: 395 RVGLVPNEYTYTSLID-ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
EA +LF +M G+ +Y +L++ F + L + +KG P L
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG------RGIKPDL 507
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
+ Y I+G C + + E A ++ M E G+ +++ Y+T++ + K G P L+ E
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 360 MNEKEIRGVLMKSCI 374
M E +I ++ C+
Sbjct: 568 MKELDIEVTVVTFCV 582
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 7/244 (2%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
R+ L+H F + D + +MI G P+V TYN ++ C+E V A G+
Sbjct: 228 RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 287
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M RGL PD YN++I G + LD + F +M + P TY+ LI C
Sbjct: 288 MKFRGLVPDTVTYNSMID-GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
+L + +REM GL +Y++L++AFC EG + AIK ++ P
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG------MMQQAIKFYVDMRRVGLVP 400
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+ TY +LI +C +G +A + M ++G+ + V+Y+ +I C A EL
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Query: 358 VEMN 361
+M+
Sbjct: 461 GKMD 464
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 135/296 (45%), Gaps = 10/296 (3%)
Query: 69 REVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFC 128
RE+ + +VS+ + + C +G M M R GL ++ TYTSLI C
Sbjct: 356 REMKGNGLKPNVVSY--STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC 413
Query: 129 HQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVD 188
+ A+++ +EM+ G +V TY L+ C+ +R++EA + M G+ P++
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 473
Query: 189 IYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFRE 248
YN +I G + +D ALE ++ +GI P Y I LC ++ A + E
Sbjct: 474 SYNALIH-GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Query: 249 MLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYG 308
M G+ YT+LM+A+ G ++ HL D +K ++VT+ LI G
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL------DIEVTVVTFCVLIDG 586
Query: 309 HCCMGRFEEALGILRGMA-EMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
C +A+ ++ + GL +A ++ +I CK + A L +M +K
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 642
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 134/308 (43%), Gaps = 45/308 (14%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
TA I LC RM M+ G+ + +Y +LIH F + +D+A ++L+E+
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII---------TW 196
RG P + Y + C +++ A ++ M + G+ + IY T++ T
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 197 GG---DQELELD---TALEF--------KAKMVEK------------GILPHADTYSWLI 230
G D+ ELD T + F K K+V K G+ +A ++ +I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
LC + ++ A LF +M++ GL AYTSLM+ +G + L D +
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE---- 676
Query: 291 FVTRFSPSLVTYNALIYG--HCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
L+ Y +L++G HC + ++A L M G+ PD V +V+ + ++G
Sbjct: 677 --IGMKLDLLAYTSLVWGLSHC--NQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELG 732
Query: 349 EPGMAYEL 356
A EL
Sbjct: 733 CIDEAVEL 740
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 142/330 (43%), Gaps = 45/330 (13%)
Query: 71 VAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQ 130
+ ++ + +VS+ T I L G++ M R G++ D + +L+ CH
Sbjct: 140 MVQRGREPDVVSY--TILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHA 197
Query: 131 EEVDKAYKVLSEMIDRG-FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+VD AY++++E I S YN L+ +C+ R+ +A + M+ G PD+
Sbjct: 198 RKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVT 257
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGI----------------LPHAD--------- 224
YN ++ + D + L A A+MV GI + H D
Sbjct: 258 YNVLLNYYYDNNM-LKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKE 316
Query: 225 ----------TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEF 274
+YS LI + C +A+ LF EM + G+ YTSL+ AF EG
Sbjct: 317 MEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNS 376
Query: 275 SKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDA 334
S L D + SP + Y ++ C G ++A G+ M E ++PDA
Sbjct: 377 SVAKKLLDQMTEL------GLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDA 430
Query: 335 VSYSTVISRFCKIGEPGMAYELMVEMNEKE 364
+SY+++IS C+ G A +L +M KE
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 129/289 (44%), Gaps = 10/289 (3%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+ SF+ I L + R M G +L TY+ I C ++ D +
Sbjct: 42 VFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDAL 101
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
LS+M GF P + +N + C E++V A M RG PDV Y TI+ G
Sbjct: 102 LSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSY-TILINGLF 160
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG-LSTGE 258
+ ++ A+E M+ G+ P + L+V LC R++ A+++ E ++ +
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLST 220
Query: 259 PAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEA 318
Y +L++ FC G K +A+K ++ P LVTYN L+ + + A
Sbjct: 221 VVYNALISGFCKAGRIEKA----EALKSYMSKIGCE--PDLVTYNVLLNYYYDNNMLKRA 274
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
G++ M G+ DA SY+ ++ R C++ P Y MV+ E E RG
Sbjct: 275 EGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK--EMEPRG 321
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D +Y++LI FC KAY++ EM +G +V TY L++A+ E A +L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
M + GLSPD Y TI+ + +D A M+E I P A +Y+ LI LC
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLC-KSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCR 442
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPD 290
R++EA LF +M E + ++ + S + + D + KGF D
Sbjct: 443 SGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ I+ C M +KG+ ++ TYTSLI F + A K+L +M +
Sbjct: 329 STLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTE 388
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G SP Y ++ C+ V +A G+ M + ++PD YN++I+ G + +
Sbjct: 389 LGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLIS-GLCRSGRVT 447
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A++ M K P T+ ++I L ++LS A+ ++ +M+ G + +L+
Sbjct: 448 EAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Query: 266 NAFC 269
A C
Sbjct: 508 KASC 511
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 3/164 (1%)
Query: 73 EKTNQKGLV--SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQ 130
E+ QKG+V T+ I+ +G M GL+ D+ YT+++ C
Sbjct: 349 EEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKS 408
Query: 131 EEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIY 190
VDKAY V ++MI+ +P +YN L+ C RV EA + M + PD +
Sbjct: 409 GNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTF 468
Query: 191 NTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
II G + +L A + +M++KG D LI + C
Sbjct: 469 KFIIG-GLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 132/311 (42%), Gaps = 43/311 (13%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I G+M M R G A+ ++ LI +C Q D A+ V EM++ G
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT---------------- 192
P+ +TYN + A C+ R+ +A +L MA +PDV YNT
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASL 395
Query: 193 -------------IITW-----GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
I+T+ G + L+ A K +M + I P TY+ L+
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
LS A +++ EMLR G+ AYT+ G+ K F LH+ +
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA-----TDH 510
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
+P L YN I G C +G +A+ R + +GL PD V+Y+TVI + + G+ MA
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570
Query: 355 ELMVEMNEKEI 365
L EM K +
Sbjct: 571 NLYDEMLRKRL 581
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 134/307 (43%), Gaps = 18/307 (5%)
Query: 77 QKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
+V++N I LC G + M + + D TYT+L+ F + A
Sbjct: 406 HPSIVTYNTL--IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV----MADRGLSPDVDIYNT 192
+V EM+ +G P Y RA E R+ ++ R+ +A +PD+ IYN
Sbjct: 464 TEVYDEMLRKGIKPDGYAYT--TRA-VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
I G + L A+EF+ K+ G++P TY+ +I + A +L+ EMLR
Sbjct: 521 RID-GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM 312
L Y L+ G + F +K P+++T+NAL+YG C
Sbjct: 580 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKK------RGVRPNVMTHNALLYGMCKA 633
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR--GVLM 370
G +EA L M E G+ P+ SY+ +IS+ C + +L EM +KEI G
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Query: 371 KSCINHL 377
++ HL
Sbjct: 694 RALFKHL 700
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 124/288 (43%), Gaps = 50/288 (17%)
Query: 80 LVSFNATATIQDLCGK-GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYK 138
+++FN T+ D C K G + M R+ + + TY LI+ F ++++A +
Sbjct: 238 VITFN---TMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 294
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGG 198
+M GF+ + ++N L+ YC++ GL D WG
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQ----------------GLFDD--------AWGV 330
Query: 199 DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE 258
E M+ GI P TY+ I +LC R+ +A RE+L +
Sbjct: 331 TDE------------MLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAAPDV 374
Query: 259 PAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEA 318
+Y +LM+ + G+F + L D ++ PS+VTYN LI G C G E A
Sbjct: 375 VSYNTLMHGYIKMGKFVEASLLFDDLRA------GDIHPSIVTYNTLIDGLCESGNLEGA 428
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ M + PD ++Y+T++ F K G MA E+ EM K I+
Sbjct: 429 QRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW--- 196
+MI +GF PSV N +++ + + +A+ + M + G+ P V +NT++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
GD E LE K + +E + TY+ LI ++ EA +M R G +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEV----TYNILINGFSKNGKMEEARRFHGDMRRSGFAV 306
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE 316
++ L+ +C +G F + + D + P+ TYN I C GR +
Sbjct: 307 TPYSFNPLIEGYCKQGLFDDAWGVTDEMLN------AGIYPTTSTYNIYICALCDFGRID 360
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
+A +L MA +PD VSY+T++ + K+G+
Sbjct: 361 DARELLSSMA----APDVVSYNTLMHGYIKMGK 389
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 10/266 (3%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T ++ G + M RKG+ D YT+ + DKA+++ EM+
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Query: 146 RGF-SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
+P + YN + C+ + +A R + GL PD Y T+I G + +
Sbjct: 508 TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR-GYLENGQF 566
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
A +M+ K + P TY LI RL +AF EM + G+ + +L
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 265 MNAFCLEGEFSKVF-HLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILR 323
+ C G + + +L + +P P+ +Y LI +C ++EE + + +
Sbjct: 627 LYGMCKAGNIDEAYRYLCKMEEEGIP-------PNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 324 GMAEMGLSPDAVSYSTVISRFCKIGE 349
M + + PD ++ + K E
Sbjct: 680 EMLDKEIEPDGYTHRALFKHLEKDHE 705
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 27/285 (9%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V+F T + LC +GR+ M +G + Y ++I+ C + + A +
Sbjct: 10 VVTF--TTLMNGLCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGDTESALNL 63
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT---- 195
LS+M + V YN ++ C++ A + M D+G+ PDV Y+ +I
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 196 ---WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
W ++L D M+E+ I P T+S LI +L E ++SEA +++ +MLR
Sbjct: 124 SGRWTDAEQLLRD--------MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM 312
G+ Y S+++ FC + + + D++ SP +VT++ LI G+C
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMAS------KSCSPDVVTFSTLINGYCKA 229
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
R + + I M G+ + V+Y+T+I FC++G+ A +L+
Sbjct: 230 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 12/282 (4%)
Query: 45 QPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXX 104
QP ++GL + TE + + ++ E + +V +NA I LC G
Sbjct: 42 QPYGTIINGLCKM-GDTESALNLLSKMEETHIKAHVVIYNAI--IDRLCKDGHHIHAQNL 98
Query: 105 XXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCE 164
M+ KG+ D TY+ +I FC A ++L +MI+R +P V T++ L+ A +
Sbjct: 99 FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVK 158
Query: 165 EDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHAD 224
E +V EA I M RG+ P YN++I Q+ L+ A M K P
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD-RLNDAKRMLDSMASKSCSPDVV 217
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI 284
T+S LI C +R+ ++F EM R G+ YT+L++ FC G+ DA
Sbjct: 218 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL-------DAA 270
Query: 285 KGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ L ++ +P+ +T+ +++ C +A IL +
Sbjct: 271 QDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 13/259 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G D T+T+L++ C + V +A ++ M++ G P Y ++ C+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
A +L M + + V IYN II + A +M +KGI P TYS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH-AQNLFTEMHDKGIFPDVITYS 115
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
+I S C R ++A L R+M+ ++ +++L+NA EG+ S+ ++
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY------ 169
Query: 288 LPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
D + R P+ +TYN++I G C R +A +L MA SPD V++ST+I+ +CK
Sbjct: 170 -GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Query: 347 IGEPGMAYELMVEMNEKEI 365
E+ EM+ + I
Sbjct: 229 AKRVDNGMEIFCEMHRRGI 247
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 7/276 (2%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I LC G M + Y ++I C A + +EM D+G
Sbjct: 48 INGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGI 107
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P V TY+ ++ ++C R +A +LR M +R ++PDV ++ +I +E ++ A
Sbjct: 108 FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN-ALVKEGKVSEAE 166
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
E M+ +GI P TY+ +I C + RL++A + M S +++L+N +
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
C K + + ++ F + VTY LI+G C +G + A +L M
Sbjct: 227 C------KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISS 280
Query: 329 GLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKE 364
G++P+ +++ ++++ C E A+ ++ ++ + E
Sbjct: 281 GVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P +VT+ L+ G CC GR +AL ++ M E G P Y T+I+ CK+G+ A L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 357 MVEMNEKEIRG 367
+ +M E I+
Sbjct: 64 LSKMEETHIKA 74
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 160/365 (43%), Gaps = 22/365 (6%)
Query: 1 MECVEEWKLNTNKVTMMLRVKTILRNRLLPLKV--IIPGFAAAGNLQPESNKVSGLWNLK 58
+E + KLN N+ T+ V I R L P K ++ GF + + L+ L
Sbjct: 273 LEMMRVRKLNPNEATIRTFVHGIFRC-LPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLS 331
Query: 59 ART-EKDVGR-IREVAEKTNQKGLVSFNATATI----QDLCGKGRMXXXXXXXXXMNRKG 112
+ K+ G+ +R++ E+ +FNA + DL R+ +G
Sbjct: 332 NNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVS------RG 385
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
+ Y L+ + + + + L +M G SV +YN ++ C+ R+ AA
Sbjct: 386 VKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAA 445
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
L M DRG+SP++ +NT ++ G ++ K++ G P T+S +I
Sbjct: 446 MFLTEMQDRGISPNLVTFNTFLS-GYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
LC + + +AFD F+EML G+ E Y L+ + C G+ + L +K
Sbjct: 505 LCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE------ 558
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
SP L YNA I C M + ++A +L+ M +GL PD +YST+I + G
Sbjct: 559 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESE 618
Query: 353 AYELM 357
A E+
Sbjct: 619 AREMF 623
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 106/248 (42%), Gaps = 7/248 (2%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
+Q L R M GL +Y ++I C ++ A L+EM DRG
Sbjct: 397 VQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI 456
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
SP++ T+N + Y V++ G+L + G PDV ++ II + E+ A
Sbjct: 457 SPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAK-EIKDAF 515
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+ +M+E GI P+ TY+ LI S C + LF +M GLS AY + + +F
Sbjct: 516 DCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
C + KV + +K L P TY+ LI GR EA + +
Sbjct: 576 C---KMRKVKKAEELLKTMLR---IGLKPDNFTYSTLIKALSESGRESEAREMFSSIERH 629
Query: 329 GLSPDAVS 336
G PD+ +
Sbjct: 630 GCVPDSYT 637
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 21/272 (7%)
Query: 34 IIPGFAAAGNLQPESNK----VSGLWNLKARTEKDVGRIREVAEKTNQKGLVS--FNATA 87
I GF + G ++P N V L N + +E D ++ GL+S ++ A
Sbjct: 377 IFDGFVSRG-VKPGFNGYLVLVQALLNAQRFSEGD-----RYLKQMGVDGLLSSVYSYNA 430
Query: 88 TIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRG 147
I LC R+ M +G++ + T+ + + + + +V K + VL +++ G
Sbjct: 431 VIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHG 490
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII---TWGGDQELEL 204
F P V T++ ++ C +++A + M + G+ P+ YN +I GD
Sbjct: 491 FKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDT---- 546
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
D +++ AKM E G+ P Y+ I S C R++ +A +L + MLR GL Y++L
Sbjct: 547 DRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 265 MNAFCLEGEFSKVFHLHDAIK--GFLPDFVTR 294
+ A G S+ + +I+ G +PD T+
Sbjct: 607 IKALSESGRESEAREMFSSIERHGCVPDSYTK 638
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 133/333 (39%), Gaps = 50/333 (15%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F I +C KG + M ++G + TYT LI F VD+A K L
Sbjct: 216 FTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEM 275
Query: 143 MIDRGFSPSVATYNKLVRA---------------------------------YCEEDR-- 167
M R +P+ AT V YC +
Sbjct: 276 MRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSM 335
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+E LR + +RG PD +N ++ ++T F V +G+ P + Y
Sbjct: 336 AKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDG-FVSRGVKPGFNGYL 394
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L+ +L +R SE ++M GL + +Y ++++ C K + +A F
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC------KARRIENAAM-F 447
Query: 288 LPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
L + R SP+LVT+N + G+ G ++ G+L + G PD +++S +I+ C+
Sbjct: 448 LTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCR 507
Query: 347 IGEPGMAYELMVEMNEKEIR------GVLMKSC 373
E A++ EM E I +L++SC
Sbjct: 508 AKEIKDAFDCFKEMLEWGIEPNEITYNILIRSC 540
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 109/248 (43%), Gaps = 7/248 (2%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
L + Y ++++ + + + L ++ +RG+ P +T+N + + + E I
Sbjct: 318 LQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRI 377
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
RG+ P + Y ++ + + + +M G+L +Y+ +I LC
Sbjct: 378 FDGFVSRGVKPGFNGYLVLVQALLNAQ-RFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC 436
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
RR+ A EM G+S + + ++ + + G+ KV H ++ L V
Sbjct: 437 KARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV---HGVLEKLL---VHG 490
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
F P ++T++ +I C ++A + M E G+ P+ ++Y+ +I C G+ +
Sbjct: 491 FKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSV 550
Query: 355 ELMVEMNE 362
+L +M E
Sbjct: 551 KLFAKMKE 558
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 18/186 (9%)
Query: 64 DVGRIREVAEKTNQKG----LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
DV ++ V EK G +++F + I LC + M G+ ++ T
Sbjct: 475 DVKKVHGVLEKLLVHGFKPDVITF--SLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y LI C + D++ K+ ++M + G SP + YN ++++C+ +V++A +L+ M
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
GL PD Y+T+I + E + A E + + G +P D+Y+ +RL
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESE-AREMFSSIERHGCVP--DSYT---------KRL 640
Query: 240 SEAFDL 245
E DL
Sbjct: 641 VEELDL 646
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 14/264 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI-DRGFSPSVATYNKLVRAYCEED 166
M + G++ T+ SL+ + + A+ + EM G +P T+N L+ +C+
Sbjct: 164 MKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223
Query: 167 RVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKG--ILPHAD 224
V EA I + M +PDV YNTII G + ++ A + M++K + P+
Sbjct: 224 MVDEAFRIFKDMELYHCNPDVVTYNTIID-GLCRAGKVKIAHNVLSGMLKKATDVHPNVV 282
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI 284
+Y+ L+ C ++ + EA +F +ML GL Y +L+ H +D I
Sbjct: 283 SYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEA-------HRYDEI 335
Query: 285 KGFL---PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
K L D T F+P T+N LI HC G + A+ + + M M L PD+ SYS +I
Sbjct: 336 KDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLI 395
Query: 342 SRFCKIGEPGMAYELMVEMNEKEI 365
C E A L E+ EKE+
Sbjct: 396 RTLCMRNEFDRAETLFNELFEKEV 419
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 127/295 (43%), Gaps = 27/295 (9%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQR--TYTSLIHMFCHQEEVDKAY 137
+V++N I LC G++ M +K + +YT+L+ +C ++E+D+A
Sbjct: 244 VVTYNTI--IDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAV 301
Query: 138 KVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD--RGLSPDVDIYNTIIT 195
V +M+ RG P+ TYN L++ E R E IL D +PD +N +I
Sbjct: 302 LVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIK 361
Query: 196 WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS 255
D LD A++ +M+ + P + +YS LI +LC A LF E+ +
Sbjct: 362 AHCDAG-HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Query: 256 TGE-------PAYTSLMNAFCLEG---EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNAL 305
G+ AY + C G + KVF + R +Y L
Sbjct: 421 LGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFR----------QLMKRGVQDPPSYKTL 470
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
I GHC G+F+ A +L M PD +Y +I KIGE +A++ + M
Sbjct: 471 ITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM 525
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 10/190 (5%)
Query: 155 YNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW---GGDQELELDTALEFK 211
+N L+R+Y +E+ + + M G+SP V +N++++ G + D E +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
G+ P + T++ LI C + EAF +F++M + Y ++++ C
Sbjct: 201 RTY---GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRA 257
Query: 272 GEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLS 331
G KV H+ + G L T P++V+Y L+ G+C +EA+ + M GL
Sbjct: 258 G---KVKIAHNVLSGMLKK-ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK 313
Query: 332 PDAVSYSTVI 341
P+AV+Y+T+I
Sbjct: 314 PNAVTYNTLI 323
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 97/239 (40%), Gaps = 34/239 (14%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y + C + +A KV +++ RG +Y L+ +C E + + A +L +M
Sbjct: 433 YNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP-PSYKTLITGHCREGKFKPAYELLVLML 491
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTAL---EFKAKMVEKGILPHADTY---------- 226
R PD++ Y +I D L++ AL + +M+ LP A T+
Sbjct: 492 RREFVPDLETYELLI----DGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKR 547
Query: 227 -----SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM------NAFCLE---- 271
S+ +V+L E+R+ + DL +++R S+ + L+ N + ++
Sbjct: 548 KFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEEL 607
Query: 272 -GEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG 329
G + L DA L + T N +I G C R EA + + E+G
Sbjct: 608 LGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 133/309 (43%), Gaps = 34/309 (11%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
S A + C GRM + G L R Y+SLI +A+++ +
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
M+ + P + Y L++ + ++ +A +L M +G+SPD YN +I +
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
L L+ + +M E P A T++ LI S+C + EA ++F E+ + G S +
Sbjct: 388 L-LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATF 446
Query: 262 TSLMNAFCLEGEFSKVFHL-----------------HDAIKGF---------------LP 289
+L++ C GE + L H + F L
Sbjct: 447 NALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLA 506
Query: 290 DFV-TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
F T SP +V+YN LI G C G + AL +L + GLSPD+V+Y+T+I+ ++G
Sbjct: 507 HFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVG 566
Query: 349 EPGMAYELM 357
A++L
Sbjct: 567 REEEAFKLF 575
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 127/331 (38%), Gaps = 69/331 (20%)
Query: 95 KGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVAT 154
KGR M +G++ ++ TYT LI C + D A K+ EM G P
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 155 YNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKM 214
+N L+ +C+ R+ EA +LR+ G + Y+++I G + A E A M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID-GLFRARRYTQAFELYANM 329
Query: 215 VEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG-- 272
++K I P Y+ LI L ++ +A L M G+S Y +++ A C G
Sbjct: 330 LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389
Query: 273 EFSKVFHLHDAIKGFLPDFVTRF---------------------------SPSLVTYNAL 305
E + L + PD T SPS+ T+NAL
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNAL 449
Query: 306 IYGHCCMGRFEEALGILRGM---------------------------------------A 326
I G C G +EA +L M A
Sbjct: 450 IDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFA 509
Query: 327 EMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+ G SPD VSY+ +I+ FC+ G+ A +L+
Sbjct: 510 DTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 6/244 (2%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
+I M D ++ L E+ G S + L+ AY + +A M +
Sbjct: 98 VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD 157
Query: 183 LSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEA 242
PDV YN I+ +E+ A +M++ P+ T+ L+ L + R S+A
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217
Query: 243 FDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTY 302
+F +M G+S YT L++ C G DA K F + P V +
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGS------ADDARKLFYEMQTSGNYPDSVAH 271
Query: 303 NALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
NAL+ G C +GR EA +LR + G YS++I + A+EL M +
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 363 KEIR 366
K I+
Sbjct: 332 KNIK 335
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 20/247 (8%)
Query: 135 KAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
KAY+ L+ D G SP + +YN L+ +C + A +L V+ +GLSPD YNT+I
Sbjct: 500 KAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Query: 195 TW----GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREML 250
G ++E FK + Y L+ C +R++ AF+L+ + L
Sbjct: 560 NGLHRVGREEE-------AFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYL 612
Query: 251 RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHC 310
+ + + F EGE + A++ + + +L Y + G C
Sbjct: 613 KKISCLDDETANEIEQCF-KEGETER------ALRRLIELDTRKDELTLGPYTIWLIGLC 665
Query: 311 CMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLM 370
GRF EAL + + E + S +I CK + A E+ + + + LM
Sbjct: 666 QSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFK--LM 723
Query: 371 KSCINHL 377
N+L
Sbjct: 724 PRVCNYL 730
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 11/263 (4%)
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
+S+N+ I +G M M G++ + TYTSL++ C +D+A ++
Sbjct: 585 MSYNSI--IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
EM ++G + Y L+ +C+ + A+ + + + GL+P IYN++I+ G +
Sbjct: 643 DEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS--GFR 700
Query: 201 EL-ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
L + AL+ KM++ G+ TY+ LI L + L A +L+ EM GL E
Sbjct: 701 NLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI 760
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
YT ++N +G+F KV + + +K +P+++ YNA+I GH G +EA
Sbjct: 761 IYTVIVNGLSKKGQFVKVVKMFEEMKK------NNVTPNVLIYNAVIAGHYREGNLDEAF 814
Query: 320 GILRGMAEMGLSPDAVSYSTVIS 342
+ M + G+ PD ++ ++S
Sbjct: 815 RLHDEMLDKGILPDGATFDILVS 837
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 127/304 (41%), Gaps = 41/304 (13%)
Query: 92 LCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS 151
LC +G+ M +G+ + +Y +++ C Q+ +D A V S ++++G P+
Sbjct: 453 LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPN 512
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW--------------- 196
TY+ L+ + A ++ M + + +Y TII
Sbjct: 513 NYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA 572
Query: 197 --------------------GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
G +E E+D+A+ +M GI P+ TY+ L+ LC
Sbjct: 573 NMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKN 632
Query: 237 RRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS 296
R+ +A ++ EM G+ PAY +L++ FC K ++ A F +
Sbjct: 633 NRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC------KRSNMESASALFSELLEEGLN 686
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
PS YN+LI G +G AL + + M + GL D +Y+T+I K G +A EL
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 357 MVEM 360
EM
Sbjct: 747 YTEM 750
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 135/319 (42%), Gaps = 46/319 (14%)
Query: 85 ATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI 144
AT+ I C + M ++G + + T++ LI F E++KA + +M
Sbjct: 342 ATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Query: 145 DRGFSPSVATYNKLVRAY----------------------------------CEEDRVRE 170
G +PSV + +++ + C++ + E
Sbjct: 402 VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDE 461
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A +L M RG+ P+V YN ++ G ++ +D A + ++EKG+ P+ TYS LI
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVM-LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Query: 231 VSLCFERRLSE-AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
CF + A ++ M + Y +++N C G+ SK L L
Sbjct: 521 DG-CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAREL-------LA 572
Query: 290 DFV--TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
+ + R S ++YN++I G G + A+ M G+SP+ ++Y+++++ CK
Sbjct: 573 NMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKN 632
Query: 348 GEPGMAYELMVEMNEKEIR 366
A E+ EM K ++
Sbjct: 633 NRMDQALEMRDEMKNKGVK 651
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 131/307 (42%), Gaps = 10/307 (3%)
Query: 62 EKDVGRIREVAEKTNQKGLVSFNATATIQ-DLCGKGR-MXXXXXXXXXMNRKGLALDQRT 119
+K++ R V +KGL N T +I D C + M + ++
Sbjct: 491 QKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVV 550
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMID-RGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
Y ++I+ C + KA ++L+ MI+ + S +YN ++ + +E + A M
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
G+SP+V Y +++ G + +D ALE + +M KG+ Y LI C
Sbjct: 611 CGNGISPNVITYTSLMN-GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
+ A LF E+L GL+ +P Y SL++ F G L+ K L D
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY---KKMLKD---GLRCD 723
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
L TY LI G G A + M +GL PD + Y+ +++ K G+ ++
Sbjct: 724 LGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFE 783
Query: 359 EMNEKEI 365
EM + +
Sbjct: 784 EMKKNNV 790
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 126/301 (41%), Gaps = 37/301 (12%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ D T L+ +E+ +A +VLS I+RG P Y+ V+A C+ + A
Sbjct: 228 GVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMA 287
Query: 172 AGILRVMADRGLS-PDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
+LR M ++ L P + Y ++I Q +D A+ K +M+ GI + + LI
Sbjct: 288 NSLLREMKEKKLCVPSQETYTSVILASVKQG-NMDDAIRLKDEMLSDGISMNVVAATSLI 346
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSK-------------- 276
C L A LF +M + G S ++ L+ F GE K
Sbjct: 347 TGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT 406
Query: 277 --VFHLHDAIKGFLPD---------FVTRFSPSLVTY---NALIYGHCCMGRFEEALGIL 322
VFH+H I+G+L F F L N ++ C G+ +EA +L
Sbjct: 407 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELL 466
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR------GVLMKSCI-N 375
M G+ P+ VSY+ V+ C+ +A + + EK ++ +L+ C N
Sbjct: 467 SKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526
Query: 376 H 376
H
Sbjct: 527 H 527
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 12/259 (4%)
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
RT ++L+ + + +A ++ S M+ G T L+RA E++ EA +L
Sbjct: 202 NRTLSALVQ----RNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLS 257
Query: 177 VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGI-LPHADTYSWLIVSLCF 235
+RG PD +Y ++ + L+L A +M EK + +P +TY+ +I++
Sbjct: 258 RAIERGAEPDSLLY-SLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVK 316
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
+ + +A L EML G+S A TSL+ C + L D ++ P
Sbjct: 317 QGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP------ 370
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
SP+ VT++ LI G E+AL + M +GL+P T+I + K + A +
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 356 LMVEMNEKEIRGVLMKSCI 374
L E E + V + + I
Sbjct: 431 LFDESFETGLANVFVCNTI 449
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 18/284 (6%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T+ I +G M M G++++ TSLI C ++ A + +M
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT-WGGDQELEL 204
G SP+ T++ L+ + + + +A + M GL+P V +TII W Q+ E
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHE- 426
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
AL+ + E G L + + ++ LC + + EA +L +M G+ +Y ++
Sbjct: 427 -EALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Query: 265 MNAFCLEG--EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEE--ALG 320
M C + + +++ + KG P+ TY+ LI G C +E AL
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKG--------LKPNNYTYSILIDG--CFRNHDEQNALE 534
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKE 364
++ M + + V Y T+I+ CK+G+ A EL+ M E++
Sbjct: 535 VVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 116/282 (41%), Gaps = 45/282 (15%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDR----GFSPSVATYNKLVRAYCEEDRVREAAG 173
R LI A ++S+++D GF + +N L+ AY ++ + A
Sbjct: 125 RASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVD 184
Query: 174 ILRVM-----------ADRGLSPDV---------DIYNTIITWGGD-------------- 199
I+ M +R LS V ++Y+ ++ G D
Sbjct: 185 IVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASL 244
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST-GE 258
+E + ALE ++ +E+G P + YS + + C L+ A L REM L +
Sbjct: 245 REEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQ 304
Query: 259 PAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEA 318
YTS++ A +G L D + L D + S ++V +LI GHC A
Sbjct: 305 ETYTSVILASVKQGNMDDAIRLKDEM---LSDGI---SMNVVAATSLITGHCKNNDLVSA 358
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
L + M + G SP++V++S +I F K GE A E +M
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKM 400
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 170/365 (46%), Gaps = 23/365 (6%)
Query: 4 VEEWKLNTNKVTMMLRVKTILRN-RLLPLKVIIPGFAAAG---NLQPESNKVSGLWNLKA 59
V E+K+N + VT +K + + RL LK ++ G N +N V G L +
Sbjct: 231 VSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGS 290
Query: 60 RTEKDVGRIREVAEKTNQ-KGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQR 118
K+ +I E+ ++TN L ++N I LC G M M L D
Sbjct: 291 L--KEAFQIVELMKQTNVLPDLCTYNIL--INGLCNAGSMREGLELMDAMKSLKLQPDVV 346
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY +LI +A K++ +M + G + T+N ++ C+E++ ++ +
Sbjct: 347 TYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406
Query: 179 AD-RGLSPDVDIYNTIITWG---GDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
D G SPD+ Y+T+I GD L ALE +M +KGI + T + ++ +LC
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGD----LSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
ER+L EA +L + G E Y +L+ F E + K + D +K +
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK------VK 516
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
+P++ T+N+LI G C G+ E A+ +AE GL PD +++++I +CK G A+
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 355 ELMVE 359
E E
Sbjct: 577 EFYNE 581
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 151/330 (45%), Gaps = 30/330 (9%)
Query: 47 ESNKVSGLWNLK--ARTEKDVGRIREVAEKTNQKG----LVSFN----ATATIQDLCGKG 96
++N+V+ +LK + EK R+V E + G +V+++ A + DL G
Sbjct: 377 KANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGAL 436
Query: 97 RMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYN 156
M M +KG+ ++ T +++ C + ++D+A+ +L+ RGF TY
Sbjct: 437 EMMRE------MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYG 490
Query: 157 KLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII---TWGGDQELELDTALEFKAK 213
L+ + E++V +A + M ++P V +N++I G EL A+E +
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTEL----AMEKFDE 546
Query: 214 MVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
+ E G+LP T++ +I+ C E R+ +AF+ + E ++ L+N C EG
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 274 FSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPD 333
K + F + VTYN +I C + +EA +L M E GL PD
Sbjct: 607 TEKALN-------FFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 334 AVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
+Y++ IS + G+ EL+ + + K
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 122/271 (45%), Gaps = 44/271 (16%)
Query: 133 VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL-RVMADRGLSPDVDIYN 191
+ A +V +M+ G S +V T+N LV YC E ++ +A G+L R++++ ++PD YN
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
TI+ ++ L E M + G++P+ TY+ L+ C L EAF + M +
Sbjct: 245 TILK-AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCC 311
+ Y L+N C G + L DA+K + P +VTYN LI G
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL------KLQPDVVTYNTLIDGCFE 357
Query: 312 MG--------------------------------RFEEALGILRGMAEM----GLSPDAV 335
+G + E+ + R + E+ G SPD V
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 336 SYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+Y T+I + K+G+ A E+M EM +K I+
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 150 PSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW--GGDQELELDTA 207
PS A ++ + AY E + A I + M L P++ NT++ + +A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG-GLSTGEPAYTSLMN 266
E MV+ G+ + T++ L+ C E +L +A + M+ ++ Y +++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 267 AFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
A +G S +K L D P+ VTYN L+YG+C +G +EA I+ M
Sbjct: 249 AMSKKGRLSD-------LKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
+ + PD +Y+ +I+ C G ELM M
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
+D TY ++I FC +++ +AY +LSEM ++G P TYN + E+ ++ E +
Sbjct: 623 VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682
Query: 175 LRVMADR--GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
L+ + + + D+ + + + EL+T A YS +I
Sbjct: 683 LKKFSGKFGSMKRDLQVETEKNPATSESKEELNT---------------EAIAYSDVIDE 727
Query: 233 LCFERRLSE 241
LC RL E
Sbjct: 728 LCSRGRLKE 736
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 129/280 (46%), Gaps = 8/280 (2%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F ++ LC K + + GL + TYT+++ + + +++ A +VL E
Sbjct: 192 FTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M+DRG+ P TY L+ YC+ R EAA ++ M + P+ Y +I +E
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR-ALCKEK 310
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+ A +M+E+ +P + +I +LC + ++ EA L+R+ML+ +
Sbjct: 311 KSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLS 370
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+L++ C EG ++ L D +F PSL+TYN LI G C G EA +
Sbjct: 371 TLIHWLCKEGRVTEARKLFD-------EFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
M E P+A +Y+ +I K G ++ EM E
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLE 463
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 123/304 (40%), Gaps = 47/304 (15%)
Query: 64 DVGRIREVAEKTNQKGLVSFNATATI--QDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
D+ + V E+ +G T T+ C GR M + + ++ TY
Sbjct: 241 DMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYG 300
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
+I C +++ +A + EM++R F P + K++ A CE+ +V EA G+ R M
Sbjct: 301 VMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKN 360
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
PD + +T+I W LC E R++E
Sbjct: 361 NCMPDNALLSTLIHW------------------------------------LCKEGRVTE 384
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVT 301
A LF E +G + + Y +L+ C +GE ++ L D + + + P+ T
Sbjct: 385 ARKLFDEFEKGSIPSLL-TYNTLIAGMCEKGELTEAGRLWDDM------YERKCKPNAFT 437
Query: 302 YNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG--EPGMAYELMVE 359
YN LI G G +E + +L M E+G P+ ++ + K+G E M M
Sbjct: 438 YNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAV 497
Query: 360 MNEK 363
MN K
Sbjct: 498 MNGK 501
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 12/261 (4%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR-GFSPSVATYNKLVRAYCEEDRVRE 170
G+ R+ +L+++ + D + + + G +P++ T N LV+A C+++ +
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A +L + GL P++ Y TI+ G ++++A +M+++G P A TY+ L+
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILG-GYVARGDMESAKRVLEEMLDRGWYPDATTYTVLM 268
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFL 288
C R SEA + +M + + E Y ++ A C E + + ++ D + + F+
Sbjct: 269 DGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFM 328
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
PD S +AL H + +EA G+ R M + PD ST+I CK G
Sbjct: 329 PDS----SLCCKVIDALCEDH----KVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Query: 349 EPGMAYELMVEMNEKEIRGVL 369
A +L E + I +L
Sbjct: 381 RVTEARKLFDEFEKGSIPSLL 401
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 16/258 (6%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVAT----YNKLVRAYCEEDR 167
G + TY S++ D +++++ R P + + L+R Y R
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADL--RNSYPPIKCGENLFIDLLRNYGLAGR 135
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIIT-WGGDQELELDTALEFKAKMVEKGILPHADTY 226
+ I + D G+ V NT++ +Q +L A+ FK GI P+ T
Sbjct: 136 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAM-FKNSKESFGITPNIFTC 194
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG 286
+ L+ +LC + + A+ + E+ GL YT+++ + G+ ++ K
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM-------ESAKR 247
Query: 287 FLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
L + + R + P TY L+ G+C +GRF EA ++ M + + P+ V+Y +I C
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 346 KIGEPGMAYELMVEMNEK 363
K + G A + EM E+
Sbjct: 308 KEKKSGEARNMFDEMLER 325
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 8/255 (3%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
GL + T L++ Q D +K+ +M+ G ++ YN LV A + +A
Sbjct: 163 GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKA 222
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+L M ++G+ PD+ YNT+I+ + + + AL + +M G+ P+ TY+ I
Sbjct: 223 EKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFE-ALSVQDRMERSGVAPNIVTYNSFIH 281
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
E R+ EA LFRE ++ ++ YT+L++ +C + + L + ++
Sbjct: 282 GFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMES----- 335
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
FSP +VTYN+++ C GR EA +L M+ + PD ++ +T+I+ +CKI +
Sbjct: 336 -RGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMV 394
Query: 352 MAYELMVEMNEKEIR 366
A ++ +M E ++
Sbjct: 395 SAVKVKKKMIESGLK 409
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 134/288 (46%), Gaps = 12/288 (4%)
Query: 79 GLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYK 138
+V++N+ I +GRM + + + + TYT+LI +C ++D+A +
Sbjct: 272 NIVTYNSF--IHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALR 328
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGG 198
+ M RGFSP V TYN ++R CE+ R+REA +L M+ + + PD NT+I
Sbjct: 329 LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYC 388
Query: 199 DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE 258
E ++ +A++ K KM+E G+ +Y LI C L A + M+ G S G
Sbjct: 389 KIE-DMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGY 447
Query: 259 PAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEE 317
Y+ L++ F + + D I L +F R + Y LI C + + +
Sbjct: 448 ATYSWLVDGFYNQNK-------QDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDY 500
Query: 318 ALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
A + M + GL D+V ++T+ + + G+ A L M + +
Sbjct: 501 AKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRL 548
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 115/256 (44%), Gaps = 8/256 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M + G+ + Y L+H + +KA K+LSEM ++G P + TYN L+ YC++
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
EA + M G++P++ YN+ I G +E + A ++ + H TY+
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIH-GFSREGRMREATRLFREIKDDVTANHV-TYT 311
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI C + EA L M G S G Y S++ C +G + L + G
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG- 370
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
+ P +T N LI +C + A+ + + M E GL D SY +I FCK+
Sbjct: 371 -----KKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Query: 348 GEPGMAYELMVEMNEK 363
E A E + M EK
Sbjct: 426 LELENAKEELFSMIEK 441
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 14/236 (5%)
Query: 133 VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT 192
++ + V ++ G P + L+ + ++ I + M G+ ++ +YN
Sbjct: 149 INDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNV 208
Query: 193 II---TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
++ + GD E A + ++M EKG+ P TY+ LI C + EA + M
Sbjct: 209 LVHACSKSGDPE----KAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
R G++ Y S ++ F EG + L IK D VT + VTY LI G+
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK----DDVT---ANHVTYTTLIDGY 317
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
C M +EAL + M G SP V+Y++++ + C+ G A L+ EM+ K+I
Sbjct: 318 CRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 118/285 (41%), Gaps = 15/285 (5%)
Query: 66 GRIREVAEKTNQ-KGLVSFNA---TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
GR+RE + K V+ N T I C + M +G + TY
Sbjct: 287 GRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYN 346
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
S++ C + +A ++L+EM + P T N L+ AYC+ + + A + + M +
Sbjct: 347 SILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIES 406
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
GL D+ Y +I G + LEL+ A E M+EKG P TYSWL+ + + E
Sbjct: 407 GLKLDMYSYKALIH-GFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDE 465
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFC-LEG-EFSKVFHLHDAIKGFLPDFVTRFSPSL 299
L E + GL Y L+ C LE +++KV KG + D
Sbjct: 466 ITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDS-------- 517
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRF 344
V + + Y + G+ EA + M L + Y ++ + +
Sbjct: 518 VIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASY 562
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 6/221 (2%)
Query: 66 GRIRE---VAEKTNQKGLVSFNATAT--IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTY 120
GRIRE + + + K + N T I C M M GL LD +Y
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSY 415
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
+LIH FC E++ A + L MI++GFSP ATY+ LV + +++ E +L
Sbjct: 416 KALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475
Query: 181 RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLS 240
RGL DV +Y +I E ++D A M +KG++ + ++ + + +++
Sbjct: 476 RGLCADVALYRGLIRRICKLE-QVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVT 534
Query: 241 EAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLH 281
EA LF M L Y S+ ++ + + + F H
Sbjct: 535 EASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFFWSH 575
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 136/305 (44%), Gaps = 13/305 (4%)
Query: 63 KDVGRIREVAE--KTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTY 120
KDV RIR V+ K + + A A I+ G + M G+ TY
Sbjct: 166 KDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTY 225
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
L++ VD A +V M P + TYN +++ YC+ + ++A LR M
Sbjct: 226 NFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMET 285
Query: 181 RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGIL--PHADTYSWLIVSLCFERR 238
RG D Y T+I + + + + +M EKGI PHA +S +I LC E +
Sbjct: 286 RGHEADKITYMTMIQ-ACYADSDFGSCVALYQEMDEKGIQVPPHA--FSLVIGGLCKEGK 342
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
L+E + +F M+R G YT L++ + G + DAI+ F P
Sbjct: 343 LNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS------VEDAIRLLHRMIDEGFKPD 396
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
+VTY+ ++ G C GR EEAL GL+ +++ YS++I K G A L
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 359 EMNEK 363
EM+EK
Sbjct: 457 EMSEK 461
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 163/375 (43%), Gaps = 31/375 (8%)
Query: 24 LRNRLLPLKVIIPGFAAAGNLQP-------------ESNKVSGLWNLKA-RTEKDVGRIR 69
++ ++ +I G+ AG Q E++K++ + ++A + D G
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 70 EVAEKTNQKGL-VSFNA-TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+ ++ ++KG+ V +A + I LC +G++ M RKG + YT LI +
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
V+ A ++L MID GF P V TY+ +V C+ RV EA GL+ +
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS 432
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
Y+++I G + +D A +M EKG + Y+ LI + R++ EA LF+
Sbjct: 433 MFYSSLID-GLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 248 EM-LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNA 304
M G YT L++ E + L D + KG +P+ + A
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKG--------ITPTAACFRA 543
Query: 305 LIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE-- 362
L G C G+ A IL +A MG+ DA +I+ CK G A +L + E
Sbjct: 544 LSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACKLADGITERG 602
Query: 363 KEIRGVLMKSCINHL 377
+E+ G + IN L
Sbjct: 603 REVPGRIRTVMINAL 617
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 32/289 (11%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y SL+ + ++VD+ V SE+ F +V+ N L++++ + V E + R M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
+ G+ P + YN ++ G + +D+A M I P TY+ +I C +
Sbjct: 215 ENGIEPTLYTYNFLMN-GLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQT 273
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--------------- 284
+A + R+M G + Y +++ A + +F L+ +
Sbjct: 274 QKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLV 333
Query: 285 ------KGFLPDFVTRF--------SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGL 330
+G L + T F P++ Y LI G+ G E+A+ +L M + G
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Query: 331 SPDAVSYSTVISRFCKIG--EPGMAYELMVEMNEKEIRGVLMKSCINHL 377
PD V+YS V++ CK G E + Y + I + S I+ L
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGL 442
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 138/317 (43%), Gaps = 42/317 (13%)
Query: 85 ATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI 144
AT+ + C + M +GLA D+ ++ ++ FC E++KA + M
Sbjct: 348 ATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMK 407
Query: 145 DRGFSPSVATY----------------------------------NKLVRAYCEEDRVRE 170
+PS NK+ +C++ +V
Sbjct: 408 SVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDA 467
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A L++M +G+ P+V YN ++ + +D A ++M+EKG+ P+ TYS LI
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK-NMDLARSIFSEMLEKGLEPNNFTYSILI 526
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFH-LHDAIKGFLP 289
+ A+D+ +M E Y +++N C G+ SK L + IK
Sbjct: 527 DGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE--- 583
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
R+S S +YN++I G +G + A+ R M+E G SP+ V+++++I+ FCK
Sbjct: 584 ---KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 350 PGMAYELMVEMNEKEIR 366
+A E+ EM E++
Sbjct: 641 MDLALEMTHEMKSMELK 657
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 144/313 (46%), Gaps = 10/313 (3%)
Query: 49 NKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXM 108
NK+ L+ + + + ++ + +K + +V +N C M M
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAH--CRMKNMDLARSIFSEM 510
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
KGL + TY+ LI F ++ A+ V+++M F + YN ++ C+ +
Sbjct: 511 LEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQT 570
Query: 169 REAAGILR-VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+A +L+ ++ ++ S YN+II G + + D+A+E +M E G P+ T++
Sbjct: 571 SKAKEMLQNLIKEKRYSMSCTSYNSIID-GFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI C R+ A ++ EM L PAY +L++ FC + + + L
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSE---- 685
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
LP+ P++ YN+LI G +G+ + A+ + + M G+S D +Y+T+I K
Sbjct: 686 LPEL--GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Query: 348 GEPGMAYELMVEM 360
G +A +L E+
Sbjct: 744 GNINLASDLYSEL 756
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 12/269 (4%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ Q TYTS+I F + +++A +V+ EM+ G SV LV YC+ + + +A
Sbjct: 305 GVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKA 364
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+ M + GL+PD +++ ++ W + +E++ A+EF +M I P + +I
Sbjct: 365 LDLFNRMEEEGLAPDKVMFSVMVEWFC-KNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
A ++F + ++ G + FC +G+ DA FL
Sbjct: 424 GCLKAESPEAALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKV-------DAATSFLKMM 475
Query: 292 VTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
+ P++V YN ++ HC M + A I M E GL P+ +YS +I F K +
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Query: 351 GMAYELMVEMNEK--EIRGVLMKSCINHL 377
A++++ +MN E V+ + IN L
Sbjct: 536 QNAWDVINQMNASNFEANEVIYNTIINGL 564
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 135/298 (45%), Gaps = 17/298 (5%)
Query: 76 NQKGLVSFNATATIQD-----LCGKGRMXXXXXXXXXM-NRKGLALDQRTYTSLIHMFCH 129
NQ +F A I + LC G+ + K ++ +Y S+I F
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVK 602
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+ D A + EM + G SP+V T+ L+ +C+ +R+ A + M L D+
Sbjct: 603 VGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA 662
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
Y +I G ++ ++ TA +++ E G++P+ Y+ LI ++ A DL+++M
Sbjct: 663 YGALID-GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDFVTRFSPSLVTYNALIY 307
+ G+S YT++++ +G + L+ + G +PD + L+
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHM--------VLVN 773
Query: 308 GHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
G G+F +A +L M + ++P+ + YSTVI+ + G A+ L EM EK I
Sbjct: 774 GLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 112/232 (48%), Gaps = 5/232 (2%)
Query: 61 TEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTY 120
T+ V RE++E +V+F T+ I C RM M L LD Y
Sbjct: 606 TDSAVETYREMSENGKSPNVVTF--TSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAY 663
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
+LI FC + ++ AY + SE+ + G P+V+ YN L+ + ++ A + + M +
Sbjct: 664 GALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVN 723
Query: 181 RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLS 240
G+S D+ Y T+I G ++ ++ A + +++++ GI+P + L+ L + +
Sbjct: 724 DGISCDLFTYTTMID-GLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFL 782
Query: 241 EAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPD 290
+A + EM + ++ Y++++ EG ++ F LHD + KG + D
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHD 834
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 119/285 (41%), Gaps = 47/285 (16%)
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDR----GFSPSVATYNKLVRAYCEEDRVREAAGILR 176
++L+ MF +++ ++D GF + +N L+ AY R+ A
Sbjct: 134 SNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFG 193
Query: 177 VMADRGLSPDV--------------------DIYNTIITWG--GD------------QEL 202
+M DR + P V +IYN ++ G GD +E
Sbjct: 194 LMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRER 253
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG--GLSTGEPA 260
+ + A++ +++ +G P +S + + C L A DL REM RG G+ +
Sbjct: 254 KPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREM-RGKLGVPASQET 312
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
YTS++ AF EG + + D + GF S++ +L+ G+C +AL
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGF------GIPMSVIAATSLVNGYCKGNELGKALD 366
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+ M E GL+PD V +S ++ FCK E A E + M I
Sbjct: 367 LFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 42/287 (14%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+A D T L+ + + ++A K+ ++ RG P ++ V+A C+ + A
Sbjct: 234 GVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMA 293
Query: 172 AGILRVMADR-GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
+LR M + G+ + Y ++I +E ++ A+ +MV GI + L+
Sbjct: 294 LDLLREMRGKLGVPASQETYTSVIV-AFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLV 352
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
C L +A DLF M GL+ + ++ ++ FC E K + +K
Sbjct: 353 NGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS---- 408
Query: 291 FVTRFSPSLVTYNALIYG----------------------------------HCCMGRFE 316
R +PS V + +I G C G+ +
Sbjct: 409 --VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVD 466
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
A L+ M + G+ P+ V Y+ ++ C++ +A + EM EK
Sbjct: 467 AATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 118/230 (51%), Gaps = 14/230 (6%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TYT+L+ C +VD+ ++ + D GF Y+ + Y + + +A R M
Sbjct: 209 TYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREM 268
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
++G++ DV Y+ +I G +E ++ AL KM+++G+ P+ TY+ +I LC +
Sbjct: 269 VEKGMNRDVVSYSILID-GLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSP 297
L EAF LF +L G+ E Y +L++ C +G ++ F + L D R P
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM-------LGDMEQRGIQP 380
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
S++TYN +I G C GR EA + +G+ D ++YST++ + K+
Sbjct: 381 SILTYNTVINGLCMAGRVSEADEVSKGVV-----GDVITYSTLLDSYIKV 425
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 133/298 (44%), Gaps = 21/298 (7%)
Query: 69 REVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFC 128
RE+ EK + +VS+ + I L +G + M ++G+ + TYT++I C
Sbjct: 266 REMVEKGMNRDVVSY--SILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC 323
Query: 129 HQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVD 188
++++A+ + + ++ G Y L+ C + + A +L M RG+ P +
Sbjct: 324 KMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSIL 383
Query: 189 IYNTIIT---WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDL 245
YNT+I G +A V KG++ TYS L+ S + + ++
Sbjct: 384 TYNTVINGLCMAGRVS---------EADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEI 434
Query: 246 FREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNAL 305
R L + L+ AF L G + + DA+ +P+ +P TY +
Sbjct: 435 RRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA----DALYRAMPEM--DLTPDTATYATM 488
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
I G+C G+ EEAL + + + +S AV Y+ +I CK G A E+++E+ EK
Sbjct: 489 IKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEK 545
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 111/275 (40%), Gaps = 45/275 (16%)
Query: 95 KGRMXXXXXXXXXMNRKGL--ALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRG-FSPS 151
KG M M K + D +++I FC + + A +D G P+
Sbjct: 147 KGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPN 206
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
+ TY LV A C+ +V E ++R + D G D Y+ I G + L AL
Sbjct: 207 LVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI-HGYFKGGALVDALMQD 265
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
+MVEKG+ +YS LI L E + EA L +M++ G+
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE---------------- 309
Query: 272 GEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLS 331
P+L+TY A+I G C MG+ EEA + + +G+
Sbjct: 310 -------------------------PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIE 344
Query: 332 PDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
D Y T+I C+ G A+ ++ +M ++ I+
Sbjct: 345 VDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 139/341 (40%), Gaps = 51/341 (14%)
Query: 66 GRIREVAEKTNQKGLVSFNATA----TIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
G+I E E N+ S +A I LC KG + + KGL LD T
Sbjct: 496 GQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSR 555
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSP-SVATYNKLVRAYCEEDRVREAAGILRVMAD 180
+L+H H DK L +++ S + N + C+ A + +M
Sbjct: 556 TLLHSI-HANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRR 614
Query: 181 RGL----------------------------------SPDVDIYNTIITWGGDQELELDT 206
+GL S DV Y TII G +E L
Sbjct: 615 KGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDY-TIIINGLCKEGFLVK 673
Query: 207 ALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMN 266
AL + +G+ + TY+ LI LC + L EA LF + GL E Y L++
Sbjct: 674 ALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILID 733
Query: 267 AFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRG 324
C EG F L D++ KG +P+ ++ YN+++ G+C +G+ E+A+ ++
Sbjct: 734 NLCKEGLFLDAEKLLDSMVSKGLVPN--------IIIYNSIVDGYCKLGQTEDAMRVVSR 785
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
++PDA + S++I +CK G+ A + E +K I
Sbjct: 786 KMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Query: 72 AEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQE 131
A +T + + T I LC +G + +G+ L+ TY SLI+ C Q
Sbjct: 645 AGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQG 704
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
+ +A ++ + + G PS TY L+ C+E +A +L M +GL P++ IYN
Sbjct: 705 CLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYN 764
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
+I+ G + + + A+ ++ + + P A T S +I C + + EA +F E
Sbjct: 765 SIVD-GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKD 823
Query: 252 GGLSTGEPAYTSLMNAFCLEG 272
+S + L+ FC +G
Sbjct: 824 KNISADFFGFLFLIKGFCTKG 844
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 9/242 (3%)
Query: 85 ATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI 144
+TA + LC G M+ KG+ + TY +I FCH A ++L MI
Sbjct: 13 STAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMI 72
Query: 145 DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
++ +P + T++ L+ A+ +E +V EA I + M + P YN++I G ++ +
Sbjct: 73 EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMID-GFCKQDRV 131
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
D A M KG P T+S LI C +R+ ++F EM R G+ YT+L
Sbjct: 132 DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 191
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVT-RFSPSLVTYNALIYGHCCMGRFEEALGILR 323
++ FC G+ DA + L + ++ +P +T++ ++ G C +A IL
Sbjct: 192 IHGFCQVGDL-------DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Query: 324 GM 325
+
Sbjct: 245 DL 246
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 123/257 (47%), Gaps = 7/257 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M + + D T+++ C A + +EM ++G P+V TYN ++ ++C R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+A +LR M ++ ++PD+ ++ +I +E ++ A E +M+ I P TY+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALIN-AFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
+I C + R+ +A + M G S +++L+N +C K + + ++ F
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC------KAKRVDNGMEIF 173
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
+ VTY LI+G C +G + A +L M G++PD +++ +++ C
Sbjct: 174 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 233
Query: 348 GEPGMAYELMVEMNEKE 364
E A+ ++ ++ + E
Sbjct: 234 KELRKAFAILEDLQKSE 250
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
Query: 70 EVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCH 129
E+ EK ++++N I C GR M K + D T+++LI+ F
Sbjct: 35 EMHEKGIFPNVLTYNCM--IDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVK 92
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+ +V +A ++ EM+ P+ TYN ++ +C++DRV +A +L MA +G SPDV
Sbjct: 93 ERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT 152
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
++T+I G + +D +E +M +GI+ + TY+ LI C L A DL EM
Sbjct: 153 FSTLIN-GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVF 278
+ G++ + ++ C + E K F
Sbjct: 212 ISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
+M EKGI P+ TY+ +I S C R S+A L R M+ ++ +++L+NAF E
Sbjct: 34 TEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKE 93
Query: 272 GEFSKVFHLHDAIKGFLPDFVTRFS--PSLVTYNALIYGHCCMGRFEEALGILRGMAEMG 329
+ S+ ++ + R+S P+ +TYN++I G C R ++A +L MA G
Sbjct: 94 RKVSEAEEIYKEM--------LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG 145
Query: 330 LSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
SPD V++ST+I+ +CK E+ EM+ + I
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 144/325 (44%), Gaps = 45/325 (13%)
Query: 79 GLVS--FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
GLV ++ I LC G + MN+ G+ D TY L F + A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 137 YKVLSEMIDRGFSPSVATYNKL------------------------------------VR 160
++V+ +M+D+G SP V TY L +
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371
Query: 161 AYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGIL 220
C+ R+ EA + M GLSPD+ Y +I+ G + + D AL +M +K IL
Sbjct: 372 GLCKTGRIDEALSLFNQMKADGLSPDLVAY-SIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 221 PHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL 280
P++ T+ L++ LC + L EA R +L +S+GE L N ++G ++K +
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEA----RSLLDSLISSGETLDIVLYN-IVIDG-YAKSGCI 484
Query: 281 HDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
+A++ F T +PS+ T+N+LIYG+C EA IL + GL+P VSY+T+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 341 ISRFCKIGEPGMAYELMVEMNEKEI 365
+ + G EL EM + I
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGI 569
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 10/252 (3%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
++ TY++++ C Q++++ A L + PSV ++N ++ YC+ V A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+ GL P V +N +I G + ALE + M + G+ P + TY+ L
Sbjct: 246 CTVLKCGLVPSVYSHNILIN-GLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR- 294
+S A+++ R+ML GLS YT L+ C G D L D ++R
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI-------DMGLVLLKDMLSRG 357
Query: 295 FS-PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
F S++ + ++ G C GR +EAL + M GLSPD V+YS VI CK+G+ MA
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 354 YELMVEMNEKEI 365
L EM +K I
Sbjct: 418 LWLYDEMCDKRI 429
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 136/315 (43%), Gaps = 11/315 (3%)
Query: 43 NLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXX 102
N S V GL + + E V +R K +VSFN+ + C G +
Sbjct: 186 NEHTYSTVVDGLCR-QQKLEDAVLFLRTSEWKDIGPSVVSFNSI--MSGYCKLGFVDMAK 242
Query: 103 XXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAY 162
+ + GL ++ LI+ C + +A ++ S+M G P TYN L + +
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302
Query: 163 CEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGI-LP 221
+ A ++R M D+GLSPDV Y TI+ G Q +D L M+ +G L
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITY-TILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 222 HADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLH 281
S ++ LC R+ EA LF +M GLS AY+ +++ C G+F L+
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 282 DAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
D + R P+ T+ AL+ G C G EA +L + G + D V Y+ VI
Sbjct: 422 DEMCD------KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 342 SRFCKIGEPGMAYEL 356
+ K G A EL
Sbjct: 476 DGYAKSGCIEEALEL 490
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 135/315 (42%), Gaps = 36/315 (11%)
Query: 87 ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR 146
A + LC KG + + G LD Y +I + +++A ++ +I+
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 147 GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII----TWGGDQEL 202
G +PSVAT+N L+ YC+ + EA IL V+ GL+P V Y T++ G + +
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLC------------FERRLSEAFDLFREML 250
+ E + +M +GI P TYS + LC ER + R+M
Sbjct: 558 D-----ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 251 RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGH 309
G+ + Y +++ C +V HL A FL +R S TYN LI
Sbjct: 613 SEGIPPDQITYNTIIQYLC------RVKHLSGAFV-FLEIMKSRNLDASSATYNILIDSL 665
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM-------NE 362
C G +A + + E +S +Y+T+I C G+P MA +L ++ +
Sbjct: 666 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSI 725
Query: 363 KEIRGVLMKSCINHL 377
++ V+ + C HL
Sbjct: 726 RDYSAVINRLCRRHL 740
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 144/325 (44%), Gaps = 45/325 (13%)
Query: 79 GLVS--FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
GLV ++ I LC G + MN+ G+ D TY L F + A
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 137 YKVLSEMIDRGFSPSVATYNKL------------------------------------VR 160
++V+ +M+D+G SP V TY L +
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371
Query: 161 AYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGIL 220
C+ R+ EA + M GLSPD+ Y +I+ G + + D AL +M +K IL
Sbjct: 372 GLCKTGRIDEALSLFNQMKADGLSPDLVAY-SIVIHGLCKLGKFDMALWLYDEMCDKRIL 430
Query: 221 PHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL 280
P++ T+ L++ LC + L EA R +L +S+GE L N ++G ++K +
Sbjct: 431 PNSRTHGALLLGLCQKGMLLEA----RSLLDSLISSGETLDIVLYN-IVIDG-YAKSGCI 484
Query: 281 HDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
+A++ F T +PS+ T+N+LIYG+C EA IL + GL+P VSY+T+
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 341 ISRFCKIGEPGMAYELMVEMNEKEI 365
+ + G EL EM + I
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGI 569
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 10/252 (3%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
++ TY++++ C Q++++ A L + PSV ++N ++ YC+ V A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+ GL P V +N +I G + ALE + M + G+ P + TY+ L
Sbjct: 246 CTVLKCGLVPSVYSHNILIN-GLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR- 294
+S A+++ R+ML GLS YT L+ C G D L D ++R
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI-------DMGLVLLKDMLSRG 357
Query: 295 FS-PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
F S++ + ++ G C GR +EAL + M GLSPD V+YS VI CK+G+ MA
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 354 YELMVEMNEKEI 365
L EM +K I
Sbjct: 418 LWLYDEMCDKRI 429
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 136/315 (43%), Gaps = 11/315 (3%)
Query: 43 NLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXX 102
N S V GL + + E V +R K +VSFN+ + C G +
Sbjct: 186 NEHTYSTVVDGLCR-QQKLEDAVLFLRTSEWKDIGPSVVSFNSI--MSGYCKLGFVDMAK 242
Query: 103 XXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAY 162
+ + GL ++ LI+ C + +A ++ S+M G P TYN L + +
Sbjct: 243 SFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGF 302
Query: 163 CEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGI-LP 221
+ A ++R M D+GLSPDV Y TI+ G Q +D L M+ +G L
Sbjct: 303 HLLGMISGAWEVIRDMLDKGLSPDVITY-TILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 222 HADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLH 281
S ++ LC R+ EA LF +M GLS AY+ +++ C G+F L+
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 282 DAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
D + R P+ T+ AL+ G C G EA +L + G + D V Y+ VI
Sbjct: 422 DEMCD------KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 342 SRFCKIGEPGMAYEL 356
+ K G A EL
Sbjct: 476 DGYAKSGCIEEALEL 490
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 135/315 (42%), Gaps = 36/315 (11%)
Query: 87 ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR 146
A + LC KG + + G LD Y +I + +++A ++ +I+
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 147 GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII----TWGGDQEL 202
G +PSVAT+N L+ YC+ + EA IL V+ GL+P V Y T++ G + +
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLC------------FERRLSEAFDLFREML 250
+ E + +M +GI P TYS + LC ER + R+M
Sbjct: 558 D-----ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 251 RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGH 309
G+ + Y +++ C +V HL A FL +R S TYN LI
Sbjct: 613 SEGIPPDQITYNTIIQYLC------RVKHLSGAFV-FLEIMKSRNLDASSATYNILIDSL 665
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM-------NE 362
C G +A + + E +S +Y+T+I C G+P MA +L ++ +
Sbjct: 666 CVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSI 725
Query: 363 KEIRGVLMKSCINHL 377
++ V+ + C HL
Sbjct: 726 RDYSAVINRLCRRHL 740
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 32/325 (9%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+R ++E+ + +V++ T+ I+ C KG M + K L DQ Y L+ +
Sbjct: 284 LRLMSERGVSRNVVTY--TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGY 341
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C ++ A +V MI+ G + N L+ YC+ ++ EA I M D L PD
Sbjct: 342 CRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 401
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
YNT++ G + +D AL+ +M +K ++P TY+ L+ + L++
Sbjct: 402 HTYNTLVD-GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVT------------ 293
ML+ G++ E + ++L+ A G+F++ L + + +G L D +T
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 294 ---------------RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYS 338
R P++ TY AL +G+ +G +EA + M G+ P Y+
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYN 580
Query: 339 TVISRFCKIGEPGMAYELMVEMNEK 363
T+IS K +L++E+ +
Sbjct: 581 TLISGAFKYRHLNKVADLVIELRAR 605
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 127/263 (48%), Gaps = 14/263 (5%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
+GL TY +LI +C+ +DKAY EMI++G + +V +K+ + D++ E
Sbjct: 605 RGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDE 664
Query: 171 AAGILRVMADRGLS-PDVDIYNTIITWGGDQELELDTALEFKAKMVEKGIL-PHADTYSW 228
A +L+ + D L P + L+ E K +L P+ Y+
Sbjct: 665 ACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNV 724
Query: 229 LIVSLCFERRLSEAFDLFREMLRGG-LSTGEPAYTSLMNAFCLEGEFSKVFHLHD--AIK 285
I LC +L +A LF ++L E YT L++ + G+ +K F L D A+K
Sbjct: 725 AIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALK 784
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
G +P+ +VTYNALI G C +G + A +L + + G++P+A++Y+T+I
Sbjct: 785 GIIPN--------IVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 346 KIGEPGMAYELMVEMNEKE-IRG 367
K G A L +M EK +RG
Sbjct: 837 KSGNVAEAMRLKEKMIEKGLVRG 859
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 7/245 (2%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
GL L+ TY SLI+ + +V+ +VL M +RG S +V TY L++ YC++ + EA
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+ ++ ++ L D +Y ++ G + ++ A+ M+E G+ + + LI
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMD-GYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLIN 374
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
C +L EA +F M L Y +L++ +C G + L D +
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM------C 428
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
P+++TYN L+ G+ +G F + L + + M + G++ D +S ST++ K+G+
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 488
Query: 352 MAYEL 356
A +L
Sbjct: 489 EAMKL 493
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 8/236 (3%)
Query: 136 AYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR-VMADRGLSPDVDIYNTII 194
A V +MI SP V T + +V AYC V +A + + GL +V YN++I
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 195 TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
G +++ M E+G+ + TY+ LI C + + EA +F + L
Sbjct: 269 N-GYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKL 327
Query: 255 STGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR 314
+ Y LM+ +C G+ +HD + + R + ++ N+LI G+C G+
Sbjct: 328 VADQHMYGVLMDGYCRTGQIRDAVRVHDN----MIEIGVRTNTTIC--NSLINGYCKSGQ 381
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLM 370
EA I M + L PD +Y+T++ +C+ G A +L +M +KE+ +M
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVM 437
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 121/284 (42%), Gaps = 40/284 (14%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
+TY +L H + + +A+ V M +G P++ YN L+ + + + A ++
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE 601
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
+ RGL+P V Y +IT + + +D A +M+EKGI + + S + SL
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGM-IDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAF------CLEGE------------------ 273
++ EA L ++++ L P Y SL CL+ +
Sbjct: 661 KIDEACLLLQKIVDFDLLL--PGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPN 718
Query: 274 ----------FSKVFHLHDAIKGFLPDFVT--RFSPSLVTYNALIYGHCCMGRFEEALGI 321
K L DA K F D ++ RF P TY LI+G G +A +
Sbjct: 719 NIVYNVAIAGLCKAGKLEDARKLF-SDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 322 LRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
MA G+ P+ V+Y+ +I CK+G A L+ ++ +K I
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGI 821
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 23 ILRNRLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVS 82
+L +++ +++PG+ + S A T +I E E + K L+
Sbjct: 667 LLLQKIVDFDLLLPGYQSLKEFLEAS----------ATTCLKTQKIAESVENSTPKKLLV 716
Query: 83 FNA---TATIQDLCGKGRMXXXXXX-XXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYK 138
N I LC G++ ++ D+ TYT LIH +++KA+
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGG 198
+ EM +G P++ TYN L++ C+ V A +L + +G++P+ YNT+I G
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLID-GL 835
Query: 199 DQELELDTALEFKAKMVEKGILPHAD 224
+ + A+ K KM+EKG++ +D
Sbjct: 836 VKSGNVAEAMRLKEKMIEKGLVRGSD 861
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 33/262 (12%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAG-I 174
D + Y ++H+ + L E++ S V + +LVR + E I
Sbjct: 103 DYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFV-VWGELVRVFKEFSFSPTVFDMI 161
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
L+V A++GL + AL M G +P + + L+ +L
Sbjct: 162 LKVYAEKGL--------------------VKNALHVFDNMGNYGRIPSLLSCNSLLSNLV 201
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
+ A ++ +M+ +S + ++NA+C G K + L
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLG----- 256
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG---EPG 351
++VTYN+LI G+ +G E +LR M+E G+S + V+Y+++I +CK G E
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 352 MAYELMVE---MNEKEIRGVLM 370
+EL+ E + ++ + GVLM
Sbjct: 317 HVFELLKEKKLVADQHMYGVLM 338
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI--DRGFSPSVATYNKLVRAYCEEDR 167
+K L + Y I C +++ A K+ S+++ DR F P TY L+
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDR-FIPDEYTYTILIHGCAIAGD 770
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +A + MA +G+ P++ YN +I G + +D A K+ +KGI P+A TY+
Sbjct: 771 INKAFTLRDEMALKGIIPNIVTYNALIK-GLCKLGNVDRAQRLLHKLPQKGITPNAITYN 829
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTG 257
LI L ++EA L +M+ GL G
Sbjct: 830 TLIDGLVKSGNVAEAMRLKEKMIEKGLVRG 859
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 134/288 (46%), Gaps = 12/288 (4%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXX--XXMNRKGLALDQRTYTSLIHMFCHQEEVDKAY 137
LV++NA + D CGKG M M R G+ D+ T+ SL+ + + A
Sbjct: 303 LVTYNA---VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 138 KVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWG 197
+ EM +R V +YN L+ A C+ ++ A IL M + + P+V Y+T+I G
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID-G 418
Query: 198 GDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTG 257
+ D AL +M GI +Y+ L+ R EA D+ REM G+
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 258 EPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEE 317
Y +L+ + +G++ +V + +K P+L+TY+ LI G+ G ++E
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMK------REHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 318 ALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
A+ I R GL D V YS +I CK G G A L+ EM ++ I
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 120/247 (48%), Gaps = 8/247 (3%)
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
+++I +V A ++ G+ +V ++ L+ AY EA + M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 181 RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLS 240
GL P++ YN +I G +E +F +M G+ P T++ L+ ++C L
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLW 355
Query: 241 EAF-DLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
EA +LF EM + +Y +L++A C G+ F I +P V R P++
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFE----ILAQMP--VKRIMPNV 409
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
V+Y+ +I G GRF+EAL + M +G++ D VSY+T++S + K+G A +++ E
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE 469
Query: 360 MNEKEIR 366
M I+
Sbjct: 470 MASVGIK 476
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 20/278 (7%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQE--EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEE 165
M GL + TY ++I C + E + K EM G P T+N L+ A C
Sbjct: 294 MKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSR 351
Query: 166 DRVREAA-GILRVMADRGLSPDVDIYNTI---ITWGGDQELELDTALEFKAKMVEKGILP 221
+ EAA + M +R + DV YNT+ I GG ++D A E A+M K I+P
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG----QMDLAFEILAQMPVKRIMP 407
Query: 222 HADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLH 281
+ +YS +I R EA +LF EM G++ +Y +L++ + +KV
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIY------TKVGRSE 461
Query: 282 DAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
+A+ +VTYNAL+ G+ G+++E + M + P+ ++YST+I
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 342 SRFCKIGEPGMAYELMVEMNEKEIRG--VLMKSCINHL 377
+ K G A E+ E +R VL + I+ L
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 21/200 (10%)
Query: 13 KVTMMLRVKTILRNRLLPLKVIIPGFAAAGNLQPESN-------------KVS-----GL 54
++ + VK I+ N ++ +I GFA AG N +VS +
Sbjct: 395 EILAQMPVKRIMPN-VVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 55 WNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLA 114
+ R+E+ + +RE+A +K +V++NA + +G+ M R+ +
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNAL--LGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
+ TY++LI + +A ++ E G V Y+ L+ A C+ V A +
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSL 571
Query: 175 LRVMADRGLSPDVDIYNTII 194
+ M G+SP+V YN+II
Sbjct: 572 IDEMTKEGISPNVVTYNSII 591
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 7/257 (2%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I LC G + + G LD Y S+I C ++ +++A ++ EM G
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
+ N L+ + R+ EA+ LR M G P V YN +I G + + A
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILIC-GLCKAGKFGEAS 519
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
F +M+E G P TYS L+ LC +R++ A +L+ + L+ GL T + L++
Sbjct: 520 AFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGL 579
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
C G+ L DA+ + +LVTYN L+ G +G A I M +M
Sbjct: 580 CSVGK------LDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKM 633
Query: 329 GLSPDAVSYSTVISRFC 345
GL PD +SY+T++ C
Sbjct: 634 GLQPDIISYNTIMKGLC 650
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 135/295 (45%), Gaps = 17/295 (5%)
Query: 66 GRIRE------VAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
G+I+E + E N +VS+N I+ L G++ M KG A D+ T
Sbjct: 339 GKIKESLELWRIMEHKNSVNIVSYNIL--IKGLLENGKIDEATMIWRLMPAKGYAADKTT 396
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y IH C V+KA V+ E+ G V Y ++ C++ R+ EA+ +++ M+
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G+ + + N +I G ++ L A F +M + G P +Y+ LI LC +
Sbjct: 457 KHGVELNSHVCNALIG-GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKF 515
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL-HDAIKGFLPDFVTRFSPS 298
EA +EML G Y+ L+ C + + L H ++ L
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL-------ETD 568
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
++ +N LI+G C +G+ ++A+ ++ M + + V+Y+T++ F K+G+ A
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 31/270 (11%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D TY+SLIH C VDKA V +E+ +R S V TYN ++ +C +++E+ +
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
R+M + S ++ YN +I G + ++D A M KG TY I LC
Sbjct: 349 RIMEHKN-SVNIVSYNILIK-GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC----------LEGEFSK-----VFHL 280
+++A + +E+ G AY S+++ C L E SK H+
Sbjct: 407 NGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466
Query: 281 HDAIKGFL--------PDFVTR------FSPSLVTYNALIYGHCCMGRFEEALGILRGMA 326
+A+ G L F R P++V+YN LI G C G+F EA ++ M
Sbjct: 467 CNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526
Query: 327 EMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
E G PD +YS ++ C+ + +A EL
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 18/253 (7%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+A + +TY LI M C ++E +KA L M GF P V +Y+ ++ + ++ +A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVE-KGILPHADTYSWLI 230
+ M++RG++PDV YN +I G +E + TA+E +++E + P+ T++ +I
Sbjct: 204 LELFDEMSERGVAPDVTCYNILID-GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSK---VFHLHDAIKGF 287
L R+ + ++ M + Y+SL++ C G K VF+ D K
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKA- 321
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC-- 345
S +VTYN ++ G C G+ +E+L + R M E S + VSY+ +I
Sbjct: 322 --------SIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLEN 372
Query: 346 -KIGEPGMAYELM 357
KI E M + LM
Sbjct: 373 GKIDEATMIWRLM 385
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 6/246 (2%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
R+Y +L++ F ++ K + + G +P++ TYN L++ C++ +A G L
Sbjct: 115 RSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDW 174
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M G PDV Y+T+I + +LD ALE +M E+G+ P Y+ LI E+
Sbjct: 175 MWKEGFKPDVFSYSTVIN-DLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEK 233
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
A +L+ +L Y ++ + SK + D +K +
Sbjct: 234 DHKTAMELWDRLLEDS-----SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
L TY++LI+G C G ++A + + E S D V+Y+T++ FC+ G+ + EL
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 358 VEMNEK 363
M K
Sbjct: 349 RIMEHK 354
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 9/254 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M ++G D +Y+++I+ ++D A ++ EM +RG +P V YN L+ + +E
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 168 VREAAGIL-RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTY 226
+ A + R++ D + P+V +N +I+ G + +D L+ +M + TY
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMIS-GLSKCGRVDDCLKIWERMKQNEREKDLYTY 293
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG 286
S LI LC + +A +F E+ S Y +++ FC G+ + L ++
Sbjct: 294 SSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME- 352
Query: 287 FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ S ++V+YN LI G G+ +EA I R M G + D +Y I C
Sbjct: 353 ------HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406
Query: 347 IGEPGMAYELMVEM 360
G A +M E+
Sbjct: 407 NGYVNKALGVMQEV 420
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 7/250 (2%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMID-RGFSPSVATYNKLVRAYCEEDRVREAAGI 174
D+ S+I + D+A V M + G P++ +YN L+ A+ E + + +
Sbjct: 77 DEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESL 136
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
G++P++ YN +I ++ E + A F M ++G P +YS +I L
Sbjct: 137 FAYFETAGVAPNLQTYNVLIKMSCKKK-EFEKARGFLDWMWKEGFKPDVFSYSTVINDLA 195
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
+L +A +LF EM G++ Y L++ F E + L D + L D +
Sbjct: 196 KAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRL---LED--SS 250
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
P++ T+N +I G GR ++ L I M + D +YS++I C G A
Sbjct: 251 VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAE 310
Query: 355 ELMVEMNEKE 364
+ E++E++
Sbjct: 311 SVFNELDERK 320
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 241 EAFDLFREMLRGGLSTGEPA---YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
+A D+F+ M + EPA Y +L+NAF ++ KV L F +P
Sbjct: 96 QALDVFKRMRE--IFGCEPAIRSYNTLLNAFVEAKQWVKVESL------FAYFETAGVAP 147
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+L TYN LI C FE+A G L M + G PD SYSTVI+ K G+ A EL
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF 207
Query: 358 VEMNEKEI 365
EM+E+ +
Sbjct: 208 DEMSERGV 215
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 122/243 (50%), Gaps = 13/243 (5%)
Query: 124 IHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGL 183
++ C +++A +L + I G P V TYN L++ Y + EA + R M + G+
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 184 SPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER--RLSE 241
PDV YN++I+ G + L L+ L+ +M+ G+ P D +S+ + C+ + R E
Sbjct: 80 EPDVTTYNSLIS-GAAKNLMLNRVLQLFDEMLHSGLSP--DMWSYNTLMSCYFKLGRHGE 136
Query: 242 AFDLFREMLR-GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLV 300
AF + E + GL G Y L++A C G H +AI+ F +R P L+
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSG------HTDNAIELF-KHLKSRVKPELM 189
Query: 301 TYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
TYN LI G C R ++R + + G +P+AV+Y+T++ + K +L ++M
Sbjct: 190 TYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Query: 361 NEK 363
++
Sbjct: 250 KKE 252
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 7/251 (2%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
R G+ D TY +LI + +D+AY V M + G P V TYN L+ + +
Sbjct: 41 RLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLN 100
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
+ M GLSPD+ YNT+++ + + G++P DTY+ L
Sbjct: 101 RVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
+ +LC A +LF+ L+ + Y L+N C V + +K
Sbjct: 161 LDALCKSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKK--- 216
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
+ ++P+ VTY ++ + R E+ L + M + G + D + V+S K G
Sbjct: 217 ---SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGR 273
Query: 350 PGMAYELMVEM 360
AYE M E+
Sbjct: 274 AEEAYECMHEL 284
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 16/268 (5%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
GL TY L+ C D A ++ + R P + TYN L+ C+ RV
Sbjct: 149 GLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSV 207
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
++R + G +P+ Y T++ + ++ L+ KM ++G ++
Sbjct: 208 DWMMRELKKSGYTPNAVTYTTMLKMYFKTK-RIEKGLQLFLKMKKEGYTFDGFANCAVVS 266
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGE-PAYTSLMNAFCLEGEFSKVFHLHDAI--KGFL 288
+L R EA++ E++R G + + +Y +L+N + +G V L + I KG
Sbjct: 267 ALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLK 326
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
PD T + ++ G +G A L + EMG+ P V+ + +I CK G
Sbjct: 327 PDDYT--------HTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAG 378
Query: 349 EPGMAYELMVEMNEKEIRGVLMKSCINH 376
A L M E+R + + H
Sbjct: 379 HVDRAMRLFASM---EVRDEFTYTSVVH 403
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 119/280 (42%), Gaps = 35/280 (12%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
LD+ Y V++A+++L EM DRG P V Y L+ YC + +V +A +
Sbjct: 386 LDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDL 445
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
+ M G+SPD+ YN +++ G + + LE +M +G P+A T S +I LC
Sbjct: 446 IDEMIGNGMSPDLITYNVLVS-GLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Query: 235 FERRLSEAFDLFREM---------------LRGGLSTG-------------EPAYTSLMN 266
F R++ EA D F + GLS + Y L
Sbjct: 505 FARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFF 564
Query: 267 AFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMA 326
+ C+EG K HD +K R P +I C + EA + M
Sbjct: 565 SLCIEGYLEKA---HDVLKKM---SAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Query: 327 EMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
E GL PD +Y+ +I +C++ E A L +M ++ I+
Sbjct: 619 ERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIK 658
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 9/240 (3%)
Query: 108 MNRKGLALD--QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEE 165
++RK LA D + ++ FC++ ++ A V+ EM + GF V ++ YC+
Sbjct: 272 IDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKN 331
Query: 166 DRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADT 225
+ EA G L M +GL + I + I+ ++ L+ +FK + + I
Sbjct: 332 MNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFK-EFRDMNIFLDRVC 390
Query: 226 YSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK 285
Y+ +L R+ EAF+L +EM G+ YT+L++ +CL+G+ L D +
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
G SP L+TYN L+ G G EE L I M G P+AV+ S +I C
Sbjct: 451 G------NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 43/256 (16%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
L + Y L C + ++KA+ VL +M P + K++ A+C+ + VREA
Sbjct: 554 LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREA--- 610
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
++ DT MVE+G++P TY+ +I + C
Sbjct: 611 --------------------------QVLFDT-------MVERGLIPDLFTYTIMIHTYC 637
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC-LEGEFSKVFHLHDAI-KGFLPDFV 292
L +A LF +M + G+ YT L++ + L+ E + + + K + +
Sbjct: 638 RLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVL 697
Query: 293 TRFSPS-----LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
FS + +V Y LI C M E+A + M + GL PD V+Y+T+IS + +
Sbjct: 698 REFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRK 757
Query: 348 GEPGMAYELMVEMNEK 363
G MA L+ E+++K
Sbjct: 758 GYIDMAVTLVTELSKK 773
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 140/326 (42%), Gaps = 21/326 (6%)
Query: 51 VSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATAT----IQDLCGKGRMXXXXXXXX 106
++GL + TEK V I E+ ++ K L + A ++ C + +M
Sbjct: 252 INGLC-VTGETEKAVALILELIDR---KYLAGDDLRAVLGMVVRGFCNEMKMKAAESVII 307
Query: 107 XMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEED 166
M G LD ++I +C + +A L +M+ +G + + +++ YC+ D
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD 367
Query: 167 RVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL-ELDTALEFKAKMVEKGILPHADT 225
EA + D + D YN + + +L ++ A E +M ++GI+P
Sbjct: 368 MCLEALEKFKEFRDMNIFLDRVCYN--VAFDALSKLGRVEEAFELLQEMKDRGIVPDVIN 425
Query: 226 YSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK 285
Y+ LI C + ++ +A DL EM+ G+S Y L++ G +V +++ +K
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
P P+ VT + +I G C + +EA + + P+ + ++ + +C
Sbjct: 486 AEGP------KPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK--CPE--NKASFVKGYC 535
Query: 346 KIGEPGMAYELMVEMNEKEIRGVLMK 371
+ G AY+ V + + V +K
Sbjct: 536 EAGLSKKAYKAFVRLEYPLRKSVYIK 561
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +GL D TYT +IH +C E+ KA + +M RG P V TY L+ Y + D
Sbjct: 617 MVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDP 676
Query: 168 -------------VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKM 214
R+A+ +LR + G+ DV Y +I L+ A E +M
Sbjct: 677 EHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMN-NLEQAAELFDRM 735
Query: 215 VEKGILPHADTYSWLIVS 232
++ G+ P Y+ LI S
Sbjct: 736 IDSGLEPDMVAYTTLISS 753
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 124/257 (48%), Gaps = 9/257 (3%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ + R+Y L+ FC +++ AY++ +M++R P V +Y L++ +C + +V A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+L M ++G PD Y T++ ++ +L A + +M KG P Y+ +I+
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLC-RKTQLREAYKLLCRMKLKGCNPDLVHYNTMIL 303
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
C E R +A + +ML G S +Y +L+ C +G F D K +L +
Sbjct: 304 GFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF-------DEGKKYLEEM 356
Query: 292 VTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
+++ FSP N L+ G C G+ EEA ++ + + G + + ++ VI C E
Sbjct: 357 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDES 416
Query: 351 GMAYELMVEMNEKEIRG 367
+ + ++EI G
Sbjct: 417 EKIKLFLEDAVKEEITG 433
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
IQ C KG++ M KG D+ +YT+L++ C + ++ +AYK+L M +G
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
+P + YN ++ +C EDR +A +L M G SP+ Y T+I DQ + D
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGM-FDEGK 350
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
++ +M+ KG PH + L+ C ++ EA D+ +++ G + + ++
Sbjct: 351 KYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLI 410
Query: 269 CLEGEFSKV-FHLHDAIK 285
C E E K+ L DA+K
Sbjct: 411 CNEDESEKIKLFLEDAVK 428
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 9/225 (4%)
Query: 126 MFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSP 185
+ H+ + KA+++ G P+ +YN L++A+C D + A + M +R + P
Sbjct: 164 LVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP 223
Query: 186 DVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDL 245
DVD Y I+ G ++ +++ A+E M+ KG +P +Y+ L+ SLC + +L EA+ L
Sbjct: 224 DVDSYK-ILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 246 FREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNA 304
M G + Y +++ FC E DA K L D ++ SP+ V+Y
Sbjct: 283 LCRMKLKGCNPDLVHYNTMILGFCREDR------AMDARK-VLDDMLSNGCSPNSVSYRT 335
Query: 305 LIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
LI G C G F+E L M G SP + ++ FC G+
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 70 EVAEKTNQKGLVS--FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
E+ + KG V + T + LC K ++ M KG D Y ++I F
Sbjct: 246 ELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGF 305
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C ++ A KVL +M+ G SP+ +Y L+ C++ E L M +G SP
Sbjct: 306 CREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 365
Query: 188 DIYNTII----TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAF 243
+ N ++ ++G +E A + +++ G H+DT+ +I +C E SE
Sbjct: 366 SVSNCLVKGFCSFGKVEE-----ACDVVEVVMKNGETLHSDTWEMVIPLICNEDE-SEKI 419
Query: 244 DLFRE 248
LF E
Sbjct: 420 KLFLE 424
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 9/266 (3%)
Query: 85 ATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI 144
A++ + C + M + G+ D T LI C V A +VL M
Sbjct: 16 ASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMK 75
Query: 145 DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
DRG SP+V TY+ L+ C+ R+ +A L M + ++P+V ++ +I + +L
Sbjct: 76 DRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRG-KL 134
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
M++ I P+ TYS LI LC R+ EA + M+ G + Y++L
Sbjct: 135 SKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTL 194
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILR 323
N F K + D IK L D R + + V+ N LI G+ G+ + ALG+
Sbjct: 195 ANGFF------KSSRVDDGIK-LLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 324 GMAEMGLSPDAVSYSTVISRFCKIGE 349
M GL P+ SY+ V++ GE
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGE 273
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 113/224 (50%), Gaps = 7/224 (3%)
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
+M+ G P + T + LV +C + +++A + M G+ DV + +I
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
L + ALE +M ++GI P+ TYS LI LC RL++A EM ++ +
Sbjct: 63 LVV-PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGI 321
++L++A+ G+ SKV ++ + D P++ TY++LIYG C R +EA+ +
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSID------PNVFTYSSLIYGLCMHNRVDEAIKM 175
Query: 322 LRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
L M G +P+ V+YST+ + F K +L+ +M ++ +
Sbjct: 176 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV 219
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 125/282 (44%), Gaps = 11/282 (3%)
Query: 70 EVAEKTNQKGLVSFNA---TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHM 126
EV ++ +G +S N ++ I LC GR+ M+ K + + T+++LI
Sbjct: 69 EVLKRMKDRG-ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 127 FCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD 186
+ + ++ K V MI P+V TY+ L+ C +RV EA +L +M +G +P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 187 VDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLF 246
V Y+T+ G + +D ++ M ++G+ + + + LI ++ A +F
Sbjct: 188 VVTYSTLAN-GFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 247 REMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALI 306
M GL +Y ++ GE K + ++ TR ++TY +I
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK------TRNDLDIITYTIMI 300
Query: 307 YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+G C +EA + + + PD +Y+ +I+ + G
Sbjct: 301 HGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 9/241 (3%)
Query: 127 FCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD 186
C Q A + +M++ G +P +YN +++ +E+ + + A ++ ++ + PD
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPD 546
Query: 187 VDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLF 246
VD Y ++ + + D A M E G+ P YS +I SL + R+ EA + F
Sbjct: 547 VDTYLIVVNELCKKN-DRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETF 605
Query: 247 REMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL-HDAIKGFLPDFVTRFSPSLVTYNAL 305
+ML G+ E AY ++N + G + L + +K FL PS TY L
Sbjct: 606 AKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFL-------RPSSFTYTVL 658
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
I G MG E+ L M E GLSP+ V Y+ +I F K G+ ++ L M E +I
Sbjct: 659 ISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDI 718
Query: 366 R 366
+
Sbjct: 719 K 719
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 12/292 (4%)
Query: 51 VSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNR 110
+ L N++ + E +G E+A K V T LC + M
Sbjct: 451 IDDLGNIEVKVESLLG---EIARKDANLAAVGLAVVTTA--LCSQRNYIAALSRIEKMVN 505
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
G +Y S+I + ++ +++ + + F P V TY +V C+++
Sbjct: 506 LGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDA 565
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A I+ M + GL P V IY++II G Q ++ F AKM+E GI P Y +I
Sbjct: 566 AFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETF-AKMLESGIQPDEIAYMIMI 624
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
+ R+ EA +L E+++ L YT L++ F G K D + L D
Sbjct: 625 NTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKM---LED 681
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
SP++V Y ALI G F+ + + M E + D ++Y T++S
Sbjct: 682 ---GLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLS 730
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 125/308 (40%), Gaps = 31/308 (10%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T +++ C M M + LD + +LIH F +DK + S+MI
Sbjct: 276 TCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIK 335
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR----GLSPDVDIYNTIITWGGDQE 201
+G +V TY+ ++ +YC+E V A LR+ + +S +V Y +I +G ++
Sbjct: 336 KGVQSNVFTYHIMIGSYCKEGNVDYA---LRLFVNNTGSEDISRNVHCYTNLI-FGFYKK 391
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
+D A++ +M++ GI+P TY L+ L L A + + +L G P
Sbjct: 392 GGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVI 451
Query: 262 TSLMN----AFCLEGEFSK------VFHLHDAIKGFLP--DFVTRFS-----------PS 298
L N L GE ++ L +++ S P
Sbjct: 452 DDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPL 511
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
+YN++I E+ ++ + E+ PD +Y V++ CK + A+ ++
Sbjct: 512 PFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIID 571
Query: 359 EMNEKEIR 366
M E +R
Sbjct: 572 AMEELGLR 579
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 47/264 (17%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TYT LI F ++K + L +M++ G SP+V Y L+ + ++ + + + +M
Sbjct: 654 TYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLM 713
Query: 179 ADRGLSPDVDIYNTIIT--W---------------GGDQELEL----------------- 204
+ + D Y T+++ W G ++ L+
Sbjct: 714 GENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNY 773
Query: 205 ---DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
A+E K V+K I+P+ ++ +I C RL EA++ M + G+ Y
Sbjct: 774 GSKSFAMEVIGK-VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTY 832
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGI 321
T LM + G+ L + T P V Y+ L+ G C R +AL +
Sbjct: 833 TILMKSHIEAGDIESAIDLFEG---------TNCEPDQVMYSTLLKGLCDFKRPLDALAL 883
Query: 322 LRGMAEMGLSPDAVSYSTVISRFC 345
+ M + G++P+ SY ++ C
Sbjct: 884 MLEMQKSGINPNKDSYEKLLQCLC 907
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 7/181 (3%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I C GR+ M ++G+ + TYT L+ +++ A +
Sbjct: 801 ITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNC 857
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P Y+ L++ C+ R +A ++ M G++P+ D Y ++ L ++ A+
Sbjct: 858 EPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTME-AV 916
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG---LSTGEPAYTSLM 265
+ M I P + ++WLI LC E++L EA LF M++ G L+ +P ++
Sbjct: 917 KVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTKPGLLKML 976
Query: 266 N 266
N
Sbjct: 977 N 977
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 87/214 (40%), Gaps = 19/214 (8%)
Query: 85 ATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI 144
A + LCG RM L Y SL + FC + +A + M
Sbjct: 220 AIGMLDTLCGMTRM---------------PLPVNLYKSLFYCFCKRGCAAEAEALFDHME 264
Query: 145 DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELEL 204
G+ Y L++ YC+++ + A + M +R D I+NT+I G + L
Sbjct: 265 VDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI-HGFMKLGML 323
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLF-REMLRGGLSTGEPAYTS 263
D ++M++KG+ + TY +I S C E + A LF +S YT+
Sbjct: 324 DKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTN 383
Query: 264 LMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRF 295
L+ F +G K L + G +PD +T F
Sbjct: 384 LIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYF 417
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 94/233 (40%), Gaps = 9/233 (3%)
Query: 133 VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCE--EDRVREAAGILRVMADRGLSPDVDIY 190
+ +A V +D G + Y L+R E + V E RV+ + G+ PD +
Sbjct: 76 ISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGN-GIVPDSSVL 134
Query: 191 NTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREML 250
++++ + + D A +++ G P ++ S ++ LC + R EAF F ++
Sbjct: 135 DSMV-FCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVK 193
Query: 251 RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHC 310
G L C G ++ + D + G +TR + Y +L Y C
Sbjct: 194 ERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCG-----MTRMPLPVNLYKSLFYCFC 248
Query: 311 CMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
G EA + M G D V Y+ ++ +CK MA L + M E+
Sbjct: 249 KRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVER 301
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 140/312 (44%), Gaps = 19/312 (6%)
Query: 61 TEKDVGRIREVAEKTNQKG----LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALD 116
E V EV E+ KG +V+ N ++ C G+M M RKG +
Sbjct: 295 NEGRVSEALEVLERVESKGGKVDVVACNTL--VKGYCALGKMRVAQRFFIEMERKGYLPN 352
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
TY LI +C +D A ++M + AT+N L+R R + IL
Sbjct: 353 VETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILE 412
Query: 177 VMADRGL--SPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
+M D +D YN +I +G +E + ALEF KM + + P A S+ ++SLC
Sbjct: 413 MMQDSDTVHGARIDPYNCVI-YGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLC 469
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
+ + + + +M+ GE S++ + CL +S+ + ++++ + D VTR
Sbjct: 470 EKGGMDDLKTAYDQMI------GEGGVPSIIVSHCLIHRYSQHGKIEESLE-LINDMVTR 522
Query: 295 -FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
+ P T+NA+I G C + + + MAE G PD SY+ ++ C G+ A
Sbjct: 523 GYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKA 582
Query: 354 YELMVEMNEKEI 365
+ L M EK I
Sbjct: 583 WLLFSRMVEKSI 594
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 113/253 (44%), Gaps = 12/253 (4%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR-GFSPSVATYNKLVRAYCEEDRVRE 170
G + TY +L H C D Y++L EM D G P A + ++R + ++
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
++ +++ G+ P + ++N+I+ +++++ F KM+ GI TY L+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREF-FTRKMMASGIHGDVYTYGILM 189
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
L R+ + F L + M G++ Y +L++A C G+ + L +K
Sbjct: 190 KGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----- 244
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
P+ VT+N LI +C + +++ +L +G PD V+ + V+ C G
Sbjct: 245 -----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRV 299
Query: 351 GMAYELMVEMNEK 363
A E++ + K
Sbjct: 300 SEALEVLERVESK 312
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 12/261 (4%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
T+ LI +C+++++ ++ +L + GF P V T K++ C E RV EA +L +
Sbjct: 250 TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERV 309
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+G DV NT++ G ++ A F +M KG LP+ +TY+ LI C
Sbjct: 310 ESKGGKVDVVACNTLVK-GYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGM 368
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
L A D F +M + + +L+ + G + + ++ R P
Sbjct: 369 LDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP- 427
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG---EPGMAYE 355
YN +IYG R+E+AL L M + L P AV S + C+ G + AY+
Sbjct: 428 ---YNCVIYGFYKENRWEDALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYD 482
Query: 356 LMVEMNEKEIRGVLMKSCINH 376
M+ E + +++ C+ H
Sbjct: 483 QMI--GEGGVPSIIVSHCLIH 501
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 15/236 (6%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ D TY L+ + +K+L M G +P+ YN L+ A C+ +
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V A ++ M + P+ +N +I+ +++ +L ++ K G +P T +
Sbjct: 233 VGRARSLMSEMKE----PNDVTFNILISAYCNEQ-KLIQSMVLLEKCFSLGFVPDVVTVT 287
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEF--SKVFHLHDAIK 285
++ LC E R+SEA ++ + G A +L+ +C G+ ++ F + K
Sbjct: 288 KVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERK 347
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
G+LP+ + TYN LI G+C +G + AL M + + +++T+I
Sbjct: 348 GYLPN--------VETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 92 LCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS 151
LC KG M M +G LIH + +++++ +++++M+ RG+ P
Sbjct: 468 LCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPR 527
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL----ELDTA 207
+T+N ++ +C++D+V + MA+RG PD + YN ++ +EL ++ A
Sbjct: 528 SSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLL-----EELCVKGDIQKA 582
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSL 233
++MVEK I+P +S L+ L
Sbjct: 583 WLLFSRMVEKSIVPDPSMWSSLMFCL 608
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 127 FCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD 186
C + +D +MI G PS+ + L+ Y + ++ E+ ++ M RG P
Sbjct: 468 LCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPR 527
Query: 187 VDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLF 246
+N +I Q+ ++ ++F M E+G +P ++Y+ L+ LC + + +A+ LF
Sbjct: 528 SSTFNAVIIGFCKQD-KVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLF 586
Query: 247 REMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFL 288
M+ + ++SLM FCL + H++ +++ +
Sbjct: 587 SRMVEKSIVPDPSMWSSLM--FCLSQK--TAIHVNSSLQDII 624
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 139/347 (40%), Gaps = 45/347 (12%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGK-GRMXXXXXXXXXMNRKGLALDQRTYTSLIHM 126
+ E+ + + + + D C K G + M++K + D Y +I
Sbjct: 250 LEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRG 309
Query: 127 FCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD 186
C + AY + +M+ RG +P V TYN L+ A C+E + EA + M + G++PD
Sbjct: 310 LCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPD 369
Query: 187 VDIYNTIIT-----------------------------W-----GGDQELELDTALEFKA 212
Y II W G + + +AL
Sbjct: 370 QISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLN 429
Query: 213 KMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG 272
M+ G+ P+ T + LI RL +A+ + EM + Y L+ A C G
Sbjct: 430 LMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLG 489
Query: 273 EFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGL 330
F L+D + +G PD ++TY L+ G C GR ++A +L + G+
Sbjct: 490 HLRLAFQLYDEMLRRGCQPD--------IITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Query: 331 SPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLMKSCINHL 377
+ D V + + ++ ++ PG AY + + RGV S +NH+
Sbjct: 542 TIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGVSCPSILNHM 588
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 123/280 (43%), Gaps = 21/280 (7%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
++ ++DLC +G++ M G+ T+ L++ C ++KA ++ EM +
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-------TWGG 198
G SP+ +YN L++ C + V +A + M G+ P+ N I+ G
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 199 DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER-RLSEAFDLFREMLRGGLSTG 257
+ + L+ L+ + P +++ CF+ + +A ++++EM + +
Sbjct: 245 NNKKLLEEILD-----SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPAD 299
Query: 258 EPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFE 316
Y ++ C G + GF+ D V R +P + TYN LI C G+F+
Sbjct: 300 SVVYNVIIRGLCSSGNMVAAY-------GFMCDMVKRGVNPDVFTYNTLISALCKEGKFD 352
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
EA + M G++PD +SY +I C G+ A E
Sbjct: 353 EACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
++S+M CL+G+ L + + P L+T+N L+ G C G E+A G
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKM------IYSGVIPGLITHNHLLNGLCKAGYIEKADG 177
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
++R M EMG SP+ VSY+T+I C + A L MN+ IR
Sbjct: 178 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIR 223
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 226 YSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK 285
+S ++ LC + +L A L ++M+ G+ G + L+N C G K L ++
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
P SP+ V+YN LI G C + ++AL + M + G+ P+ V+ + ++ C
Sbjct: 184 EMGP------SPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALC 237
Query: 346 KIGEPGMAYELMVE 359
+ G G + ++E
Sbjct: 238 QKGVIGNNNKKLLE 251
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 9/244 (3%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMI-DRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
T+ +I VD A + +++ DR FSP+ TY L+ + R+ EA +
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M D G P+ IYN +I G + E D A +MV++G+ P TYS L+ LC
Sbjct: 917 MLDYGCRPNCAIYNILINGFG-KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FS 296
R+ E F+E+ GL+ Y ++N K L +A+ F +R +
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGL------GKSHRLEEALVLFNEMKTSRGIT 1029
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P L TYN+LI G EEA I + GL P+ +++ +I + G+P AY +
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Query: 357 MVEM 360
M
Sbjct: 1090 YQTM 1093
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 131/312 (41%), Gaps = 31/312 (9%)
Query: 84 NATATI-QDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
N TI + L KG + M G L+ +Y LIH+ +A +V
Sbjct: 154 NTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 213
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
MI GF PS+ TY+ L+ + + G+L+ M GL P+V + I G +
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG-RAG 272
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+++ A E +M ++G P TY+ LI +LC R+L A ++F +M G Y
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 263 SLMNAFCLEGEFSKVFHLHDAIK--GFLPDFVT------------RFS------------ 296
+L++ F + V ++ G +PD VT F
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ 392
Query: 297 ---PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
P+L TYN LI G + R ++AL + M +G+ P A +Y I + K G+ A
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 354 YELMVEMNEKEI 365
E +M K I
Sbjct: 453 LETFEKMKTKGI 464
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 154/348 (44%), Gaps = 14/348 (4%)
Query: 32 KVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQD 91
++I+ GF + LQ S+ + GL + + +G ++E+ + + +F T I+
Sbjct: 213 RMILEGFRPS--LQTYSSLMVGLGK-RRDIDSVMGLLKEMETLGLKPNVYTF--TICIRV 267
Query: 92 LCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS 151
L G++ M+ +G D TYT LI C ++D A +V +M P
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
TY L+ + + + M G PDV + TI+ + A +
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF-TILVDALCKAGNFGEAFDTL 386
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
M ++GILP+ TY+ LI L RL +A +LF M G+ Y ++ +
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKS 446
Query: 272 GEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLS 331
G+ + +K +P++V NA +Y GR EA I G+ ++GL
Sbjct: 447 GDSVSALETFEKMK------TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 332 PDAVSYSTVISRFCKIGEPGMAYELMVEMNEK--EIRGVLMKSCINHL 377
PD+V+Y+ ++ + K+GE A +L+ EM E E +++ S IN L
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 129/338 (38%), Gaps = 63/338 (18%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I LC ++ M D+ TY +L+ F ++D + SEM
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-----TWGGDQ 200
G P V T+ LV A C+ EA L VM D+G+ P++ YNT+I D
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 201 ELEL-----------------------------DTALEFKAKMVEKGILPHADTYSWLIV 231
LEL +ALE KM KGI P+ + +
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLP 289
SL R EA +F + GL Y +M + GE + L + G P
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 290 DFVT---------------------------RFSPSLVTYNALIYGHCCMGRFEEALGIL 322
D + + P++VTYN L+ G G+ +EA+ +
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
GM + G P+ ++++T+ CK E +A +++ +M
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 99/227 (43%), Gaps = 4/227 (1%)
Query: 70 EVAEKTNQKGLVS--FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
E EK KG+ A++ L GR + GL D TY ++ +
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
E+D+A K+LSEM++ G P V N L+ + DRV EA + M + L P V
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
YNT++ G + ++ A+E MV+KG P+ T++ L LC ++ A +
Sbjct: 574 VTYNTLLAGLG-KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF-HLHDAIKGFLPDFVT 293
+M+ G Y +++ G+ + H K PDFVT
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVT 679
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 113/253 (44%), Gaps = 14/253 (5%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY LI + ++ A V ++ G P VATYN L+ AY + ++ E + + M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALE-FKAKMVEKGILPHADTYSWLIVSLCFER 237
+ + +N +I+ G + +D AL+ + M ++ P A TY LI L
Sbjct: 847 STHECEANTITHNIVIS-GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FS 296
RL EA LF ML G Y L+N F GE DA V
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE-------ADAACALFKRMVKEGVR 958
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P L TY+ L+ C +GR +E L + + E GL+PD V Y+ +I+ +G+ E
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN---GLGKSHRLEEA 1015
Query: 357 MVEMNE-KEIRGV 368
+V NE K RG+
Sbjct: 1016 LVLFNEMKTSRGI 1028
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 6/217 (2%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I L GR+ M G + Y LI+ F E D A + M+ G
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P + TY+ LV C RV E + + + GL+PDV YN II G + +
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
F +GI P TY+ LI++L + EA ++ E+ R GL + +L+ +
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNAL 305
L G+ + ++ + FSP+ TY L
Sbjct: 1078 SLSGKPEHAYAVYQTM------VTGGFSPNTGTYEQL 1108
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 20/256 (7%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M KG+A + + ++ +A ++ + D G P TYN +++ Y +
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIIT--WGGDQELELDTALEFKAKMVEKGILPHADT 225
+ EA +L M + G PDV + N++I + D+ +D A + +M E + P T
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR---VDEAWKMFMRMKEMKLKPTVVT 575
Query: 226 YSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFS----KVFHLH 281
Y+ L+ L ++ EA +LF M++ G + +L + C E + +F +
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 282 DAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
D G +PD + TYN +I+G G+ +EA+ M ++ + PD V+ T++
Sbjct: 636 DM--GCVPD--------VFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLL 684
Query: 342 SRFCKIGEPGMAYELM 357
K AY+++
Sbjct: 685 PGVVKASLIEDAYKII 700
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 11/244 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ TY I + + A + +M +G +P++ N + + + R
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
REA I + D GL PD YN ++ + E+D A++ ++M+E G P +
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYS-KVGEIDEAIKLLSEMMENGCEPDVIVVN 542
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--K 285
LI +L R+ EA+ +F M L Y +L+ G+ + L + + K
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
G P+ +T+N L C AL +L M +MG PD +Y+T+I
Sbjct: 603 GC--------PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654
Query: 346 KIGE 349
K G+
Sbjct: 655 KNGQ 658
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 158 LVRAYCEEDRVREAAGIL-RVMADRGLSPDVDIYNTIITWGGDQELEL-DTALEFKAKMV 215
++R C+ + V A + + D G+ P + YN +I GG E ++ + A + ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI--GGLLEADMIEIAQDVFLQVK 812
Query: 216 EKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFS 275
G +P TY++L+ + ++ E F+L++EM ST E ++ + + G
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEM-----STHECEANTITHNIVISG-LV 866
Query: 276 KVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDA 334
K ++ DA+ + R FSP+ TY LI G GR EA + GM + G P+
Sbjct: 867 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNC 926
Query: 335 VSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
Y+ +I+ F K GE A L M ++ +R
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVR 958
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 46/283 (16%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRG--------------------------- 147
++ + L+ F V KA +VL EM G
Sbjct: 165 IEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKV 224
Query: 148 -------FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
F P++ + L+ +C E ++ EA +L M + GL PD+ ++ +++ G
Sbjct: 225 FEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLS-GYAH 283
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLC-FERRLSEAFDLFREMLRGGLSTGEP 259
++ A + M ++G P+ + Y+ LI +LC E+R+ EA +F EM R G
Sbjct: 284 AGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEE 317
YT+L++ FC G K + + D + KG + PS VTY ++ H +FEE
Sbjct: 344 TYTALISGFCKWGMIDKGYSVLDDMRKKGVM--------PSQVTYMQIMVAHEKKEQFEE 395
Query: 318 ALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
L ++ M G PD + Y+ VI CK+GE A L EM
Sbjct: 396 CLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEM 438
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 11/259 (4%)
Query: 92 LCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS 151
LC G + M R+ + R +TSL++ +C + ++ +A +VL +M + G P
Sbjct: 212 LCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPD 270
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
+ + L+ Y ++ +A ++ M RG P+V+ Y +I E +D A+
Sbjct: 271 IVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVF 330
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
+M G TY+ LI C + + + + +M + G+ + Y +M A +
Sbjct: 331 VEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 390
Query: 272 GEFSKVFHLHDAIK--GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG 329
+F + L + +K G PD L+ YN +I C +G +EA+ + M G
Sbjct: 391 EQFEECLELIEKMKRRGCHPD--------LLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 330 LSPDAVSYSTVISRFCKIG 348
LSP ++ +I+ F G
Sbjct: 443 LSPGVDTFVIMINGFTSQG 461
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 17/262 (6%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T+ + C +G++ M GL D +T+L+ + H ++ AY ++++M
Sbjct: 240 TSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRK 299
Query: 146 RGFSPSVATYNKLVRAYCE-EDRVREAAGILRVMADRGLSPDVDIYNTIIT----WGGDQ 200
RGF P+V Y L++A C E R+ EA + M G D+ Y +I+ WG
Sbjct: 300 RGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM-- 357
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
+D M +KG++P TY ++V+ + + E +L +M R G
Sbjct: 358 ---IDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
Y ++ C GE + L + ++ SP + T+ +I G G EA
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEA------NGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 321 ILRGMAEMGLSPDAVSYSTVIS 342
+ M G+ A Y T+ S
Sbjct: 469 HFKEMVSRGIF-SAPQYGTLKS 489
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 34/299 (11%)
Query: 34 IIPGFAAAGNL---------------QPESNKVSGLWNLKARTEKDVGRIREVAEKTNQK 78
++ G+A AG + +P N + L RTEK + V + +
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 79 G----LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVD 134
G +V++ TA I C G + M +KG+ Q TY ++ +E+ +
Sbjct: 337 GCEADIVTY--TALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFE 394
Query: 135 KAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
+ +++ +M RG P + YN ++R C+ V+EA + M GLSP VD + +I
Sbjct: 395 ECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMI 454
Query: 195 TWGGDQELELDTALEFKAKMVEKGIL--PHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
Q ++ FK +MV +GI P T L+ +L + +L A D++ +
Sbjct: 455 NGFTSQGFLIEACNHFK-EMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVW-SCISN 512
Query: 253 GLSTGE---PAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYG 308
S+ E A+T ++A +G H+ +A L P TY L+ G
Sbjct: 513 KTSSCELNVSAWTIWIHALYAKG------HVKEACSYCLDMMEMDLMPQPNTYAKLMKG 565
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 10/265 (3%)
Query: 78 KGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAY 137
+ L SFN TI D+ K + R ++D TY +++ +C + KA
Sbjct: 159 QDLASFN---TILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKAL 215
Query: 138 KVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWG 197
+VL EM++RG +P++ TYN +++ + ++R A M R DV Y T++ G
Sbjct: 216 EVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH-G 274
Query: 198 GDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTG 257
E+ A +M+ +G+LP TY+ +I LC + + A +F EM+R G
Sbjct: 275 FGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPN 334
Query: 258 EPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEE 317
Y L+ GEFS+ L ++ P+ TYN +I + E+
Sbjct: 335 VTTYNVLIRGLFHAGEFSRGEELMQRMEN------EGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 318 ALGILRGMAEMGLSPDAVSYSTVIS 342
ALG+ M P+ +Y+ +IS
Sbjct: 389 ALGLFEKMGSGDCLPNLDTYNILIS 413
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 7/200 (3%)
Query: 55 WNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLA 114
W L RT K + ++E+ E+ L ++N ++ G++ M ++
Sbjct: 205 WCLIKRTPKALEVLKEMVERGINPNLTTYNTM--LKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
+D TYT+++H F E+ +A V EMI G PSVATYN +++ C++D V A +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI--VS 232
M RG P+V YN +I G E E +M +G P+ TY+ +I S
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIR-GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Query: 233 LCFERRLSEAFDLFREMLRG 252
C E + +A LF +M G
Sbjct: 382 ECSE--VEKALGLFEKMGSG 399
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 12/245 (4%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
+T+ + + + DKA K+ M + G +A++N ++ C+ RV +A + R
Sbjct: 127 KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRA 186
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
+ R S D YN I+ G ALE +MVE+GI P+ TY+ ++
Sbjct: 187 LRGR-FSVDTVTYNVILN-GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 244
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRF 295
++ A++ F EM + YT++++ F + GE + ++ D + +G LP
Sbjct: 245 QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLP------ 298
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
S+ TYNA+I C E A+ + M G P+ +Y+ +I GE E
Sbjct: 299 --SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 356 LMVEM 360
LM M
Sbjct: 357 LMQRM 361
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 219 ILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF 278
I P T++ + + +A LF M G ++ ++++ C K +
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 279 HLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYS 338
L A++G RFS VTYN ++ G C + R +AL +L+ M E G++P+ +Y+
Sbjct: 182 ELFRALRG-------RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 339 TVISRFCKIGEPGMAYELMVEMNEKE 364
T++ F + G+ A+E +EM +++
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRD 260
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 25/296 (8%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I C G + M R L+ + T+T LI +C +++ A + EM
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
S +V TY L+ +C++ ++ A + M + + P+ +Y TII G Q + D A+
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID-GFFQRGDSDNAM 288
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+F AKM+ +G+ Y +I LC +L EA ++ +M + L +T++MNA+
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348
Query: 269 CLEGEFSKVFHLHDAI--KGFLPDFVTRFS----------------------PSLVTYNA 304
G +++ + +GF PD V + + V Y
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTV 408
Query: 305 LIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
LI C G F E + ++E GL PD Y++ I+ CK G A++L M
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM 464
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 11/259 (4%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
+G + ++ S++ C +V A ++ M G P V +YN L+ +C +R
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 171 AAGILRVM-ADRGL--SPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
A+ +L + A G PD+ +N++ G + LD + M+ K P+ TYS
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFN-GFSKMKMLDEVFVYMGVML-KCCSPNVVTYS 167
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
I + C L A F M R LS +T L++ +C G+ L+ ++
Sbjct: 168 TWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR- 226
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
R S ++VTY ALI G C G + A + M E + P+++ Y+T+I F +
Sbjct: 227 -----VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 348 GEPGMAYELMVEMNEKEIR 366
G+ A + + +M + +R
Sbjct: 282 GDSDNAMKFLAKMLNQGMR 300
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 144/372 (38%), Gaps = 60/372 (16%)
Query: 24 LRNRLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSF 83
L ++ +I G+ AG+L+ + K++ R+R L
Sbjct: 194 LSPNVVTFTCLIDGYCKAGDLE-----------VAVSLYKEMRRVR--------MSLNVV 234
Query: 84 NATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEM 143
TA I C KG M M + + YT++I F + + D A K L++M
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 144 IDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELE 203
+++G + Y ++ C +++EA I+ M L PD+ I+ T++ +
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN-AYFKSGR 353
Query: 204 LDTALEFKAKMVEKGILPHADT------------------------------YSWLIVSL 233
+ A+ K++E+G P Y+ LI +L
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDAL 413
Query: 234 CFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDF 291
C E E LF ++ GL + YTS + C +G F L + +G L D
Sbjct: 414 CKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD- 472
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
L+ Y LIYG G EA + M G+SPD+ + +I + K G
Sbjct: 473 -------LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMA 525
Query: 352 MAYELMVEMNEK 363
A +L+++M +
Sbjct: 526 AASDLLLDMQRR 537
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 9/252 (3%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D T IH + + K L+ ++ RG++P +++N +V C+ +V+ A I+
Sbjct: 20 DPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIV 79
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW--LIVSL 233
M G PDV YN++I +L ++ G + D S+ L
Sbjct: 80 HSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGF 139
Query: 234 CFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVT 293
+ L E F ML+ S Y++ ++ FC GE L A+K F
Sbjct: 140 SKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGE------LQLALKSFHSMKRD 192
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
SP++VT+ LI G+C G E A+ + + M + +S + V+Y+ +I FCK GE A
Sbjct: 193 ALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRA 252
Query: 354 YELMVEMNEKEI 365
E+ M E +
Sbjct: 253 EEMYSRMVEDRV 264
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 134/315 (42%), Gaps = 38/315 (12%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
SFN+ + +C G++ M R G D +Y SLI C ++ A VL
Sbjct: 58 SFNSVVSF--VCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLE 115
Query: 142 EM-IDRGF--SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-TWG 197
+ GF P + ++N L + + + E + VM + SP+V Y+T I T+
Sbjct: 116 SLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFC 174
Query: 198 GDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTG 257
EL+L AL+ M + P+ T++ LI C L A L++EM R +S
Sbjct: 175 KSGELQL--ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 258 EPAYTSLMNAFCLEGEFSKVFHLHD----------------AIKGFL----PDFVTRFSP 297
YT+L++ FC +GE + ++ I GF D +F
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 298 SLVT---------YNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
++ Y +I G C G+ +EA I+ M + L PD V ++T+++ + K G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 349 EPGMAYELMVEMNEK 363
A + ++ E+
Sbjct: 353 RMKAAVNMYHKLIER 367
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 62 EKDVGRIREVAEKTNQKGLV--SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
E D + + K ++ GLV F T+ I LC +G + M ++GL LD
Sbjct: 416 EGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLA 475
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
YT+LI+ + + +A +V EM++ G SP A ++ L+RAY +E + A+ +L M
Sbjct: 476 YTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQ 535
Query: 180 DRGL 183
RGL
Sbjct: 536 RRGL 539
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 135/288 (46%), Gaps = 16/288 (5%)
Query: 57 LKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALD 116
LKAR + R E+ ++ + S I+ LC G + ++GL
Sbjct: 191 LKAR---KLDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPG 247
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
Q Y LI FC +VL MI PS+ Y K+++ C + EA I +
Sbjct: 248 QYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFK 307
Query: 177 VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
+ D+G +PD +Y T+I G ++ L +A + +M++KG+ P+ Y+ +++ F+
Sbjct: 308 NLKDKGYAPDRVVYTTMIR-GFCEKGWLGSARKLWFEMIKKGMRPNEFAYN-VMIHGHFK 365
Query: 237 R---RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVT 293
R L EAF + EMLR G + +++ FC G+ + F + + T
Sbjct: 366 RGEISLVEAF--YNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSE------T 417
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
+P+ +TYNALI G C + E+ L + + + +GL P ++Y+ ++
Sbjct: 418 GVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 7/232 (3%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
D LI C +V + Y++L + + +G P Y KL+ +CE + +
Sbjct: 211 FDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEV 270
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
L M P + IY II + +L+ FK + +KG P Y+ +I C
Sbjct: 271 LHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFK-NLKDKGYAPDRVVYTTMIRGFC 329
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
+ L A L+ EM++ G+ E AY +++ GE S V ++ +
Sbjct: 330 EKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEM------LRNG 383
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ ++++ N +I G C G+ +EA I + M+E G++P+A++Y+ +I FCK
Sbjct: 384 YGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCK 435
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 112/236 (47%), Gaps = 16/236 (6%)
Query: 135 KAYKVLSEMIDR-GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI 193
KA K +D GF P + V+ EE V EA + V+ D G+S V N++
Sbjct: 127 KAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSV 186
Query: 194 ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
+ G + +LD E +MVE ++ LI +LC +SE ++L ++ L+ G
Sbjct: 187 LL-GCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQG 243
Query: 254 LSTGEPAYTSLMNAFCLEGEF---SKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHC 310
L G+ Y L++ FC G + S+V H A F PS+ Y +I G C
Sbjct: 244 LDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHF---------PSMYIYQKIIKGLC 294
Query: 311 CMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ EA I + + + G +PD V Y+T+I FC+ G G A +L EM +K +R
Sbjct: 295 MNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMR 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I+ C KG + M +KG+ ++ Y +IH + E+ +EM+
Sbjct: 322 TTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLR 381
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G+ ++ + N +++ +C + EA I + M++ G++P+ YN +I G +E +++
Sbjct: 382 NGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIK-GFCKENKVE 440
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDL 245
L+ ++ G+ P Y+ L+ +L ++ + +L
Sbjct: 441 KGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 14/288 (4%)
Query: 78 KGLVSFNATATI-QDLCGKGRMXXXXXXXXXMNRK-GLALDQRTYTSLIHMFCHQEEVDK 135
K +S N A + ++ G+G M R+ ++ YT +I + + +DK
Sbjct: 100 KNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDK 159
Query: 136 AYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT 195
+V EM +G S SV +Y L+ AY R + +L M + +SP + YNT+I
Sbjct: 160 CLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVIN 219
Query: 196 WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL-SEAFDLFREMLRGGL 254
L+ + L A+M +GI P TY+ L+ S C R L EA +FR M GG+
Sbjct: 220 ACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLL-SACAIRGLGDEAEMVFRTMNDGGI 278
Query: 255 STGEPAYTSLMNAFCLEGEFSKVFHL--HDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM 312
Y+ L+ F KV L A G LPD + +YN L+ +
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD--------ITSYNVLLEAYAKS 330
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
G +EA+G+ M G +P+A +YS +++ F + G +L +EM
Sbjct: 331 GSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 121/315 (38%), Gaps = 9/315 (2%)
Query: 60 RTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
R EK + E+A + + S+N ++ G + M G + T
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVL--LEAYAKSGSIKEAMGVFHQMQAAGCTPNANT 354
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y+ L+++F D ++ EM P ATYN L+ + E +E + M
Sbjct: 355 YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMV 414
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
+ + PD++ Y II G L D A + M I+P + Y+ +I +
Sbjct: 415 EENIEPDMETYEGIIFACGKGGLHED-ARKILQYMTANDIVPSSKAYTGVIEAFGQAALY 473
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
EA F M G + + SL+ +F G + +AI L D + +
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLLYSFARGG----LVKESEAILSRLVD--SGIPRNR 527
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
T+NA I + G+FEEA+ M + PD + V+S + E E
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEE 587
Query: 360 MNEKEIRGVLMKSCI 374
M +I +M C+
Sbjct: 588 MKASDILPSIMCYCM 602
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 17/262 (6%)
Query: 117 QRTYTSLIHMFCHQEE--VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
+ T+ L+ C + + ++VL+ M++ G P T + VR+ CE RV EA +
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK-GILPHADTYSWLIVSL 233
++ + ++ PD YN ++ + +L EF +M + + P +++ LI ++
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCK-DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 234 CFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDF 291
C + L EA L ++ G Y ++M FC + S+ ++ +K G PD
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD- 299
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
+TYN LI+G GR EEA L+ M + G PD +Y+++++ C+ GE
Sbjct: 300 -------QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 352 MAYELMVEMNEKEIRGVLMKSC 373
A L+ EM E RG C
Sbjct: 353 GALSLLEEM---EARGCAPNDC 371
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 16/273 (5%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR-G 147
++ LC GR+ + K D TY L+ C +++ Y+ + EM D
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII----TWGGDQELE 203
P + ++ L+ C +REA ++ + + G PD +YNTI+ T E
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE-- 283
Query: 204 LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTS 263
A+ KM E+G+ P TY+ LI L R+ EA + M+ G YTS
Sbjct: 284 ---AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 264 LMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILR 323
LMN C +GE L + ++ +P+ TYN L++G C ++ + +
Sbjct: 341 LMNGMCRKGESLGALSLLEEMEA------RGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
Query: 324 GMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
M G+ ++ Y+T++ K G+ AYE+
Sbjct: 395 MMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D ++T LI C+ + + +A ++S++ + GF P YN +++ +C + EA G+
Sbjct: 229 DLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVY 288
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+ M + G+ PD YNT+I +G + ++ A + MV+ G P TY+ L+ +C
Sbjct: 289 KKMKEEGVEPDQITYNTLI-FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
+ A L EM G + + Y +L++ C K L++ +K +
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN- 406
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
Y L+ G+ EA + + DA +YST+
Sbjct: 407 -----GYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 3/206 (1%)
Query: 77 QKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
+ LVSF T I ++C + + G D Y +++ FC + +A
Sbjct: 227 KPDLVSF--TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEA 284
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW 196
V +M + G P TYN L+ + RV EA L+ M D G PD Y +++
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN- 343
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
G ++ E AL +M +G P+ TY+ L+ LC R + + +L+ M G+
Sbjct: 344 GMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHD 282
Y +L+ + G+ ++ + + D
Sbjct: 404 ESNGYATLVRSLVKSGKVAEAYEVFD 429
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +G+ DQ TY +LI V++A L M+D G+ P ATY L+ C +
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGE 350
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
A +L M RG +P+ YNT++ L +D +E M G+ ++ Y+
Sbjct: 351 SLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL-MDKGMELYEMMKSSGVKLESNGYA 409
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
L+ SL +++EA+++F + + AY++L
Sbjct: 410 TLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 110/254 (43%), Gaps = 10/254 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ D++ Y +I F +D A M+ G P T+N L+ +C+ R
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
A + M RG P YN +I GDQE D KM +GILP+ T++
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE-RWDDMKRLLGKMKSQGILPNVVTHT 553
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L+ R ++A + EM GL Y +L+NA+ G + A+ F
Sbjct: 554 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQ------AVNAF 607
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS---RF 344
PSL+ N+LI R EA +L+ M E G+ PD V+Y+T++ R
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV 667
Query: 345 CKIGEPGMAYELMV 358
K + + YE M+
Sbjct: 668 DKFQKVPVVYEEMI 681
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 185/425 (43%), Gaps = 65/425 (15%)
Query: 11 TNKV--TMMLRV-KTILRNRL-LPLKV---IIPGFAAAGNLQPESNKVSGLWN---LKAR 60
+NK+ M+LR+ K I R++L L +++ II GFA +G+ ++ ++ G+ L A+
Sbjct: 245 SNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD-PSKALQLLGMAQATGLSAK 303
Query: 61 TEK---------DVGRIREVA---EKTNQKGLV----SFNATATIQDLCGKGRMXXXXXX 104
T D GR E E+ Q G+ ++NA ++ G +
Sbjct: 304 TATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL--LKGYVKTGPLKDAESM 361
Query: 105 XXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCE 164
M ++G++ D+ TY+ LI + + + A VL EM P+ +++L+ + +
Sbjct: 362 VSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRD 421
Query: 165 EDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHAD 224
++ +L+ M G+ PD YN +I G LD A+ +M+ +GI P
Sbjct: 422 RGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC-LDHAMTTFDRMLSEGIEPDRV 480
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI 284
T++ LI C R A ++F M R G Y ++N++ + + + L +
Sbjct: 481 TWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKM 540
Query: 285 K--GFLPDFVT------------RFS---------------PSLVTYNALIYGHCCMGRF 315
K G LP+ VT RF+ PS YNALI + G
Sbjct: 541 KSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLS 600
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR------GVL 369
E+A+ R M GL P ++ +++I+ F + A+ ++ M E ++ L
Sbjct: 601 EQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Query: 370 MKSCI 374
MK+ I
Sbjct: 661 MKALI 665
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 125/312 (40%), Gaps = 18/312 (5%)
Query: 64 DVGRIREVAEKTNQKGLVS--FNATATIQDLCGKGRMXXXXXXX--XXMNRKGLALDQRT 119
D+ + + K Q G S N + IQ L ++ + R L LD +
Sbjct: 212 DIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQL 271
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
+I F + KA ++L G S AT ++ A + R EA + +
Sbjct: 272 VNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELR 331
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G+ P YN ++ G + L A ++M ++G+ P TYS LI + R
Sbjct: 332 QSGIKPRTRAYNALLK-GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDFVTRFSP 297
A + +EM G + ++ L+ F GE+ K F + +K G PD +F
Sbjct: 391 ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD--RQF-- 446
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
YN +I + A+ M G+ PD V+++T+I CK G +A E+
Sbjct: 447 ----YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 358 VEMNEKEIRGVL 369
M E RG L
Sbjct: 503 EAM---ERRGCL 511
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 1/185 (0%)
Query: 93 CGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSV 152
C GR M R+G TY +I+ + QE D ++L +M +G P+V
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 153 ATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKA 212
T+ LV Y + R +A L M GL P +YN +I + L F+
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 213 KMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG 272
M G+ P + LI + +RR +EAF + + M G+ YT+LM A
Sbjct: 610 -MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 668
Query: 273 EFSKV 277
+F KV
Sbjct: 669 KFQKV 673
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +G+ + T+T+L+ ++ + A + L EM G PS YN L+ AY +
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+A RVM GL P + N++I G+ + + A M E G+ P TY+
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE-AFAVLQYMKENGVKPDVVTYT 658
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
L+ +L + + ++ EM+ G A + L +A
Sbjct: 659 TLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 13/246 (5%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY +LI +++KA ++++M G+ Y+ ++++ +++ ++ +LR+
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKI-DSVMLLRLY 257
Query: 179 AD---RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+ L DV + N II G + + AL+ G+ T +I +L
Sbjct: 258 KEIERDKLELDVQLVNDIIM-GFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALAD 316
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR- 294
R EA LF E+ + G+ AY +L+ + G L DA + + + R
Sbjct: 317 SGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGP------LKDA-ESMVSEMEKRG 369
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
SP TY+ LI + GR+E A +L+ M + P++ +S +++ F GE +
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 355 ELMVEM 360
+++ EM
Sbjct: 430 QVLKEM 435
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TYT L+ + C +A +VL +M G P + TYN LV C + E A +++ +
Sbjct: 246 TYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHI 305
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
GL + YNT++ E D E M + P TY+ LI LC R
Sbjct: 306 LSHGLELNTVTYNTLLHSLCSHEY-WDEVEEILNIMYQTSYCPTVITYNILINGLCKARL 364
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
LS A D F +ML Y +++ A EG L +K T P
Sbjct: 365 LSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKN------TCCPPG 418
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
L+TYN++I G G ++AL + M + G+ PD ++ ++I FC+
Sbjct: 419 LITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCR 466
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 138/343 (40%), Gaps = 56/343 (16%)
Query: 56 NLKARTE-------KDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXM 108
NL+AR + G I E E+TN + + +LC G++ M
Sbjct: 80 NLRARVKPMKQFGLSSDGPITENDEETNNE---------ILHNLCSNGKLTDACKLVEVM 130
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
R + ++L+ +++DKA +L M+ G P TYN ++ C++ +
Sbjct: 131 ARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHI 190
Query: 169 REAAGILRVMADRGLSPDVDIYNTII----TWGGDQE----------------------- 201
R A +L M+ G PDV YNT+I +G ++
Sbjct: 191 RTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVL 250
Query: 202 LEL-------DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
+EL A+E M +G P TY+ L+ C L E + + +L GL
Sbjct: 251 VELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGL 310
Query: 255 STGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR 314
Y +L+++ C + +V + + + + T + P+++TYN LI G C
Sbjct: 311 ELNTVTYNTLLHSLCSHEYWDEVEEILNIM------YQTSYCPTVITYNILINGLCKARL 364
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
A+ M E PD V+Y+TV+ K G A EL+
Sbjct: 365 LSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELL 407
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 126/301 (41%), Gaps = 30/301 (9%)
Query: 66 GRIREVAEKTNQKG----LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
R EV E +G +V++N+ C +G + + GL L+ TY
Sbjct: 261 ARAIEVLEDMAVEGCYPDIVTYNSLVNYN--CRRGNLEEVASVIQHILSHGLELNTVTYN 318
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
+L+H C E D+ ++L+ M + P+V TYN L+ C+ + A M ++
Sbjct: 319 TLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQ 378
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
PD+ YNT++ +E +D A+E + P TY+ +I L + + +
Sbjct: 379 KCLPDIVTYNTVL-GAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKK 437
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFC---LEGEFSKVF----HLHDAIKGFLPDFVTR 294
A +L+ +ML G+ + SL+ FC L E +V + + I+G
Sbjct: 438 ALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRG-------- 489
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
TY +I G C E A+ ++ M G PD Y+ ++ + E GM
Sbjct: 490 -----STYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVK---GVEEMGMGS 541
Query: 355 E 355
E
Sbjct: 542 E 542
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 143/362 (39%), Gaps = 79/362 (21%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F I C GR+ + + +++D TY ++I C D+AY+ LSE
Sbjct: 130 FALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSE 186
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL--------------------------- 175
M+ G P +YN L+ +C+ A ++
Sbjct: 187 MVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEA 246
Query: 176 -RVMADRGLSPDVDIYNTIIT--WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
R M G PDV +++II G + LE L +M E + P+ TY+ L+ S
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR---EMEEMSVYPNHVTYTTLVDS 303
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF----- 287
L A L+ +M+ G+ YT LM+ G+ L +A K F
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD------LREAEKTFKMLLE 357
Query: 288 ---LPDFVTRFS---------------------------PSLVTYNALIYGHCCMGRFEE 317
+P+ VT + P++VTY+++I G+ G EE
Sbjct: 358 DNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEE 417
Query: 318 ALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN--EKEIRGVLMKSCIN 375
A+ +LR M + + P+ +Y TVI K G+ MA EL EM E ++ + +N
Sbjct: 418 AVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVN 477
Query: 376 HL 377
HL
Sbjct: 478 HL 479
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 119/236 (50%), Gaps = 18/236 (7%)
Query: 112 GLALDQRTYTSLIHMFCHQEEV-DKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
G+ D R + SLIH F V D+ + S+MI G SP V N L+ ++C+ R+
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A +LR +R +S D YNT+I+ + L D A +F ++MV+ GILP +Y+ LI
Sbjct: 148 AISLLR---NRVISIDTVTYNTVISGLCEHGLA-DEAYQFLSEMVKMGILPDTVSYNTLI 203
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
C A L E+ L T +T L++++ ++LH + +
Sbjct: 204 DGFCKVGNFVRAKALVDEISELNLIT----HTILLSSY---------YNLHAIEEAYRDM 250
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
++ F P +VT++++I C G+ E +LR M EM + P+ V+Y+T++ K
Sbjct: 251 VMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFK 306
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I LC G M +G D T+ SL+H + V KA S M++ G
Sbjct: 685 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 744
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
SP+VATYN ++R + ++E L M RG+ PD YN +I+ G + + ++
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS-GQAKIGNMKGSM 803
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+M+ G++P TY+ LI ++ +A +L +EM + G+S Y ++++
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGL 863
Query: 269 C 269
C
Sbjct: 864 C 864
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 46/238 (19%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ L ++ Y +LI C KA V+ +M RGF P T+N L+ Y VR+A
Sbjct: 673 GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKA 732
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQEL--ELDTALEFKAKMVEKGILPHADTYSWL 229
VM + G+SP+V YNTII D L E+D L ++M +G+ P TY+ L
Sbjct: 733 LSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL---SEMKSRGMRPDDFTYNAL 789
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
I + + ++ EM+ GL Y L++ EF+ V
Sbjct: 790 ISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLIS------EFANV------------ 831
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
G+ +A +L+ M + G+SP+ +Y T+IS CK+
Sbjct: 832 -----------------------GKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TYT+L+ C ++ A ++++M+++ P+V TY+ ++ Y ++ + EA +LR M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 179 ADRGLSPDVDIYNTIITW---GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
D+ + P+ Y T+I G +E+ A+E +M G+ + L+ L
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEM----AIELSKEMRLIGVEENNYILDALVNHLKR 481
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
R+ E L ++M+ G++ + YTSL++ F G+ + ++ R
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ-------ERG 534
Query: 296 SP-SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
P +V+YN LI G G+ A +GM E G+ PD +++ +++ K G+
Sbjct: 535 MPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 593
Query: 355 ELMVEMNEKEIRGVLMKSC 373
+L +M I+ LM SC
Sbjct: 594 KLWDKMKSCGIKPSLM-SC 611
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
V+ ++ L R Y +R+ AA L M G+ PD ++N++I L D
Sbjct: 58 VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
+KM+ G+ P + LI S C RLS A L R + +S Y ++++ C
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEH 174
Query: 272 GEFSKVFH-LHDAIK-GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL------- 322
G + + L + +K G LPD V+YN LI G C +G F A ++
Sbjct: 175 GLADEAYQFLSEMVKMGILPD--------TVSYNTLIDGFCKVGNFVRAKALVDEISELN 226
Query: 323 ---------------------RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN 361
R M G PD V++S++I+R CK G+ L+ EM
Sbjct: 227 LITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME 286
Query: 362 EKEI 365
E +
Sbjct: 287 EMSV 290
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 130/318 (40%), Gaps = 48/318 (15%)
Query: 87 ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR 146
A + L GR+ M KG+ LDQ YTSLI +F + + A EM +R
Sbjct: 474 ALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQER 533
Query: 147 GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW---GGDQE-- 201
G V +YN L+ + +V A + M ++G+ PD+ +N ++ GD E
Sbjct: 534 GMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGI 592
Query: 202 -----------------------------LELDTALEFKAKMVEKGILPHADTYSWLIVS 232
+++ A+ +M+ I P+ TY + +
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPD 290
+R F +L G+ Y +L+ C G K + + +GF+PD
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
VT+N+L++G+ +AL M E G+SP+ +Y+T+I + +
Sbjct: 713 --------TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIR---GLSDA 761
Query: 351 GMAYELMVEMNEKEIRGV 368
G+ E+ ++E + RG+
Sbjct: 762 GLIKEVDKWLSEMKSRGM 779
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 109/274 (39%), Gaps = 42/274 (15%)
Query: 92 LCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS 151
LC G+M M + + TY + + D +K ++ G S
Sbjct: 618 LCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLS 677
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
YN L+ C+ ++AA ++ M RG PD +N+++ G + AL
Sbjct: 678 RQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMH-GYFVGSHVRKALSTY 736
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
+ M+E GI P+ TY+ +I R LS+A GL + S M +
Sbjct: 737 SVMMEAGISPNVATYNTII------RGLSDA----------GLIKEVDKWLSEMKS---- 776
Query: 272 GEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLS 331
+G PD T YNALI G +G + ++ I M GL
Sbjct: 777 -------------RGMRPDDFT--------YNALISGQAKIGNMKGSMTIYCEMIADGLV 815
Query: 332 PDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
P +Y+ +IS F +G+ A EL+ EM ++ +
Sbjct: 816 PKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 7/234 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +G LD R Y +I FC +V+KAY++L EM +GF P+V TY ++ + DR
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ EA + + + +V IY+++I G + +D A ++++KG+ P+ T++
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLID-GFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L+ +L ++EA F+ M + + Y L+N C +F+K F ++
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK- 755
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
PS ++Y +I G G EA + G PD+ Y+ +I
Sbjct: 756 -----QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 13/278 (4%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
+ LC ++ M+ K D+ T+ SLI VD AYKV +M+D
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW---GGDQELELD 205
+ Y L++ + R + I + M ++ SPD+ + NT + G+ E
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
E KA+ +P A +YS LI L +E ++LF M G AY ++
Sbjct: 539 MFEEIKARR----FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ FC G+ +K + L + +K F P++VTY ++I G + R +EA +
Sbjct: 595 DGFCKCGKVNKAYQLLEEMK------TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
+ + V YS++I F K+G AY ++ E+ +K
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 12/245 (4%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
YT+LI F D + +M + G+ P+V + L+R + +E RV A +L M
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
L D+ +YN I G + ++D A +F ++ G+ P TY+ +I LC RL
Sbjct: 231 SSSLDADIVLYNVCIDSFG-KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRL 289
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL--HDAIKGFLPDFVTRFSP 297
EA ++F + + AY +++ + G+F + + L KG + P
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI--------P 341
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
S++ YN ++ MG+ +EAL + M + +P+ +Y+ +I C+ G+ A+EL
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 358 VEMNE 362
M +
Sbjct: 401 DSMQK 405
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 7/254 (2%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
+K A + TY LI M C ++D A+++ M G P+V T N +V C+ ++
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
EA + M + +PD + ++I G + +D A + KM++ ++ Y+ L
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLID-GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
I + R + ++++M+ S + M+ GE K + + IK
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA--- 545
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
RF P +Y+ LI+G G E + M E G D +Y+ VI FCK G+
Sbjct: 546 ---RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 350 PGMAYELMVEMNEK 363
AY+L+ EM K
Sbjct: 603 VNKAYQLLEEMKTK 616
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 120/297 (40%), Gaps = 14/297 (4%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I+ +GR+ M L D Y I F +VD A+K E+
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G P TY ++ C+ +R+ EA + + P YNT+I G + D
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG-KFD 325
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A + KG +P Y+ ++ L ++ EA +F EM + + Y L+
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILI 384
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ C G+ F L D+++ P++ T N ++ C + +EA + M
Sbjct: 385 DMLCRAGKLDTAFELRDSMQK------AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR------GVLMKSCINH 376
+PD +++ ++I K+G AY++ +M + + R L+K+ NH
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 126/323 (39%), Gaps = 44/323 (13%)
Query: 66 GRIREVAEKTNQKGLVSFNATATIQDLC----GK-GRMXXXXXXXXXMNRKGLALDQRTY 120
GR+ ++ S +A + ++C GK G++ + GL D+ TY
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
TS+I + C +D+A ++ + P YN ++ Y + EA +L
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 181 RGLSPDVDIYNTIITW-----GGDQEL----------------------------ELDTA 207
+G P V YN I+T D+ L +LDTA
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
E + M + G+ P+ T + ++ LC ++L EA +F EM + E + SL++
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 268 FCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAE 327
KV + DA K + + + + Y +LI GR E+ I + M
Sbjct: 457 ------LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 328 MGLSPDAVSYSTVISRFCKIGEP 350
SPD +T + K GEP
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEP 533
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 110/275 (40%), Gaps = 34/275 (12%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
+Y SL+ + D ++L EM GF PSV T ++V + +++RE ++++M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 179 ADRGLSPDVDIYNTIITWGGDQEL-ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
P Y T+I G + D L +M E G P ++ LI E
Sbjct: 160 RKFKFRPAFSAYTTLI--GAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFS---KVFHLHDAIKGFLPDFVT- 293
R+ A L EM L Y +++F G+ K FH +A G PD VT
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA-NGLKPDEVTY 276
Query: 294 --------------------------RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAE 327
R P YN +I G+ G+F+EA +L
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 328 MGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
G P ++Y+ +++ K+G+ A ++ EM +
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 9/250 (3%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D TY +LI+ + A ++ +M+ +PS +TYN L+ A REA +
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 236
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+ M D G+ PD+ +N +++ + AL + M + P T++ +I L
Sbjct: 237 KKMTDNGVGPDLVTHNIVLS-AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 236 ERRLSEAFDLFREML--RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVT 293
+ S+A DLF M R +TS+M+ + ++GE + +A+
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM------VAE 349
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
P++V+YNAL+ + G AL +L + + G+ PD VSY+ +++ + + +PG A
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 354 YELMVEMNEK 363
E+ + M ++
Sbjct: 410 KEVFLMMRKE 419
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 42/293 (14%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
+ + G+ D +YT L++ + + KA +V M P+V TYN L+ AY
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Query: 168 VREAAGILRVMADRGLSPDV-----------------------------------DIYNT 192
+ EA I R M G+ P+V YN+
Sbjct: 441 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 500
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
I EL+ A+ M +K + + T++ LI C + EA +EM
Sbjct: 501 AIG-SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM 312
+ + Y+S++ A+ +G+ ++ + + +K + P ++ Y ++++ +
Sbjct: 560 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK------MAGCEPDVIAYTSMLHAYNAS 613
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
++ +A + M G+ PD+++ S ++ F K G+P + LM M EKEI
Sbjct: 614 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 34/267 (12%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M R +A + TY +LI+ +A +V +M D G P + T+N ++ AY +
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 168 VREAAGILRVMADRGLSPDVDIYNTII---TWGGDQELELDTALEFKAKMVEKGILPHAD 224
+A +M + PD +N II + G LD + K E P
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE--CRPDVV 321
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI 284
T++ ++ + + +F M+ GL +Y +LM A+ + G + I
Sbjct: 322 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 381
Query: 285 K--GFLPDFVT---------------------------RFSPSLVTYNALIYGHCCMGRF 315
K G +PD V+ R P++VTYNALI + G
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVIS 342
EA+ I R M + G+ P+ VS T+++
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLA 468
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 116/280 (41%), Gaps = 42/280 (15%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D T+TS++H++ + E++ V M+ G P++ +YN L+ AY A +L
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+ G+ PDV Y ++ G + + A E M ++ P+ TY+ LI +
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYG-RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 236 ERRLSEAFDLFREMLRG-----------------------------------GLSTGEPA 260
L+EA ++FR+M + G++ A
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
Y S + ++ E K L+ +++ + VT+ LI G C M ++ EA+
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRK------KKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
L+ M ++ + YS+V+ + K G+ A + +M
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 110/248 (44%), Gaps = 9/248 (3%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y +I + VD+A + EM P TY+ L+ A+ + R A ++ M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
++P YN +I G ALE KM + G+ P T++ ++ + R+
Sbjct: 206 RAAIAPSRSTYNNLINACGSSG-NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE--GEFSKVFHLHDAIKGFLPDFVTRFSP 297
S+A F E+++G + +++ +CL G+ S+ L ++++ + P
Sbjct: 265 SKALSYF-ELMKGAKVRPDTTTFNII-IYCLSKLGQSSQALDLFNSMR----EKRAECRP 318
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+VT+ ++++ + G E + M GL P+ VSY+ ++ + G G A ++
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 358 VEMNEKEI 365
++ + I
Sbjct: 379 GDIKQNGI 386
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAY---------- 162
L + RT L+ +C+Q ++++A+ ++ +M G P V T+N L +AY
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 163 --------------------------CEEDRVREAAGILRVMADRGLSPDVDIYNTIITW 196
CEE ++ EA M + G+ P++ ++N++I
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK- 574
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
G ++D E M E G+ P T+S L+ + + +++ +ML GG+
Sbjct: 575 GFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP 634
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE 316
A++ L + GE K + + ++ F P++V Y +I G C G +
Sbjct: 635 DIHAFSILAKGYARAGEPEKAEQILNQMRKF------GVRPNVVIYTQIISGWCSAGEMK 688
Query: 317 EALGILRGMAEM-GLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+A+ + + M + GLSP+ +Y T+I F + +P A EL+ +M K +
Sbjct: 689 KAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNV 738
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 150/336 (44%), Gaps = 14/336 (4%)
Query: 33 VIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDL 92
VI G G+++ + ++GL + R ++ + E+ ++ L+++ T + L
Sbjct: 308 VICSGGTTCGDVRSRTKLMNGLIE-RGRPQEAHSIFNTLIEEGHKPSLITY--TTLVTAL 364
Query: 93 CGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSV 152
+ + + GL D + ++I+ +D+A K+ +M + G P+
Sbjct: 365 TRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTA 424
Query: 153 ATYNKLVRAYCEEDRVREAAGILRVM-ADRGLSPDVDIYNTII-TWGGDQELELDTALEF 210
+T+N L++ Y + ++ E++ +L +M D L P+ N ++ W +++E A
Sbjct: 425 STFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIE--EAWNI 482
Query: 211 KAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDL-FREMLRGGLSTGEPAYTSLMNAFC 269
KM G+ P T++ L + A D+ ML + +++N +C
Sbjct: 483 VYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYC 542
Query: 270 LEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG 329
EG+ + +A++ F P+L +N+LI G + + ++ M E G
Sbjct: 543 EEGK------MEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 330 LSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+ PD V++ST+++ + +G+ E+ +M E I
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 7/260 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI-DRGFSPSVATYNKLVRAYCEED 166
M G T+ +LI + +++++ ++L M+ D P+ T N LV+A+C +
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQR 474
Query: 167 RVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTY 226
++ EA I+ M G+ PDV +NT+ +M+ + P+ T
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC 534
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG 286
++ C E ++ EA F M G+ + SL+ F + V + D ++
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 287 FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
F P +VT++ L+ +G + I M E G+ PD ++S + + +
Sbjct: 595 F------GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYAR 648
Query: 347 IGEPGMAYELMVEMNEKEIR 366
GEP A +++ +M + +R
Sbjct: 649 AGEPEKAEQILNQMRKFGVR 668
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 105/232 (45%), Gaps = 8/232 (3%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
RT ++++ +C + ++++A + M + G P++ +N L++ + + + ++ +
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 178 MADRGLSPDVDIYNTIIT-WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
M + G+ PDV ++T++ W +++ E M+E GI P +S L
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMK--RCEEIYTDMLEGGIDPDIHAFSILAKGYARA 649
Query: 237 RRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS 296
+A + +M + G+ YT +++ +C GE K ++ + G + S
Sbjct: 650 GEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG-----IVGLS 704
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
P+L TY LI+G + +A +L+ M + P + + + IG
Sbjct: 705 PNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
+ C +G+M M G+ + + SLI F + ++D +V+ M + G
Sbjct: 538 VNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGV 597
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P V T++ L+ A+ ++ I M + G+ PD+ + +I+ G + E + A
Sbjct: 598 KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF-SILAKGYARAGEPEKAE 656
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR-GGLSTGEPAYTSLMNA 267
+ +M + G+ P+ Y+ +I C + +A ++++M GLS Y +L+
Sbjct: 657 QILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWG 716
Query: 268 F 268
F
Sbjct: 717 F 717
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ D T+++L++ + ++ + ++ ++M++ G P + ++ L + Y
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVE-KGILPHADTY 226
+A IL M G+ P+V IY II+ G E+ A++ KM G+ P+ TY
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIIS-GWCSAGEMKKAMQVYKKMCGIVGLSPNLTTY 710
Query: 227 SWLIVSLCFERRLSEAFDLFREM 249
LI ++ +A +L ++M
Sbjct: 711 ETLIWGFGEAKQPWKAEELLKDM 733
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 119/250 (47%), Gaps = 9/250 (3%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D TY +LI+ + A ++ +M+ +PS +TYN L+ A REA +
Sbjct: 45 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 104
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+ M D G+ PD+ +N +++ + AL + M + P T++ +I L
Sbjct: 105 KKMTDNGVGPDLVTHNIVLS-AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 163
Query: 236 ERRLSEAFDLFREML--RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVT 293
+ S+A DLF M R +TS+M+ + ++GE + +A+
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM------VAE 217
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
P++V+YNAL+ + G AL +L + + G+ PD VSY+ +++ + + +PG A
Sbjct: 218 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 277
Query: 354 YELMVEMNEK 363
E+ + M ++
Sbjct: 278 KEVFLMMRKE 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 42/293 (14%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
+ + G+ D +YT L++ + + KA +V M P+V TYN L+ AY
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 168 VREAAGILRVMADRGLSPDV-----------------------------------DIYNT 192
+ EA I R M G+ P+V YN+
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNS 368
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
I EL+ A+ M +K + + T++ LI C + EA +EM
Sbjct: 369 AIG-SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 427
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM 312
+ + Y+S++ A+ +G+ ++ + + +K + P ++ Y ++++ +
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK------MAGCEPDVIAYTSMLHAYNAS 481
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
++ +A + M G+ PD+++ S ++ F K G+P + LM M EKEI
Sbjct: 482 EKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 534
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 34/267 (12%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M R +A + TY +LI+ +A +V +M D G P + T+N ++ AY +
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 168 VREAAGILRVMADRGLSPDVDIYNTII---TWGGDQELELDTALEFKAKMVEKGILPHAD 224
+A +M + PD +N II + G LD + K E P
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE--CRPDVV 189
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI 284
T++ ++ + + +F M+ GL +Y +LM A+ + G + I
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249
Query: 285 K--GFLPDFVT---------------------------RFSPSLVTYNALIYGHCCMGRF 315
K G +PD V+ R P++VTYNALI + G
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 309
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVIS 342
EA+ I R M + G+ P+ VS T+++
Sbjct: 310 AEAVEIFRQMEQDGIKPNVVSVCTLLA 336
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 116/280 (41%), Gaps = 42/280 (15%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D T+TS++H++ + E++ V M+ G P++ +YN L+ AY A +L
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+ G+ PDV Y ++ G + + A E M ++ P+ TY+ LI +
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYG-RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 305
Query: 236 ERRLSEAFDLFREMLRG-----------------------------------GLSTGEPA 260
L+EA ++FR+M + G++ A
Sbjct: 306 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 365
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
Y S + ++ E K L+ +++ + VT+ LI G C M ++ EA+
Sbjct: 366 YNSAIGSYINAAELEKAIALYQSMRK------KKVKADSVTFTILISGSCRMSKYPEAIS 419
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
L+ M ++ + YS+V+ + K G+ A + +M
Sbjct: 420 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 110/248 (44%), Gaps = 9/248 (3%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y +I + VD+A + EM P TY+ L+ A+ + R A ++ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
++P YN +I G ALE KM + G+ P T++ ++ + R+
Sbjct: 74 RAAIAPSRSTYNNLINACGSSG-NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE--GEFSKVFHLHDAIKGFLPDFVTRFSP 297
S+A F E+++G + +++ +CL G+ S+ L ++++ + P
Sbjct: 133 SKALSYF-ELMKGAKVRPDTTTFNII-IYCLSKLGQSSQALDLFNSMR----EKRAECRP 186
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+VT+ ++++ + G E + M GL P+ VSY+ ++ + G G A ++
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 358 VEMNEKEI 365
++ + I
Sbjct: 247 GDIKQNGI 254
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 9/256 (3%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFS-PSVATYNKLVRAYCEEDRVRE 170
GL + + L+ C +++ A+ V+ EM G S P+ TY+ L+ R +E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 171 AAGILRVMADR-GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
A + M + G+SPD +N +I G + E++ A + M + G P+ YS L
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMIN-GFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
+ C ++ EA F E+ + GL YT+LMN FC GE + L +K
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKA--- 366
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
+R +TYN ++ G GR EEAL +L G+ + SY +++ C GE
Sbjct: 367 ---SRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGE 423
Query: 350 PGMAYELMVEMNEKEI 365
A + + M+E+ I
Sbjct: 424 LEKAVKFLSVMSERGI 439
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 116/251 (46%), Gaps = 9/251 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
++++G++ D T+ +I+ FC EV++A K+L M G +P+V Y+ L+ +C+ +
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
++EA + GL D Y T++ + E D A++ +M TY+
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC-RNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ L E R EA + + G+ + +Y ++NA C GE K A+K F
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEK------AVK-F 430
Query: 288 LPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
L R P T+N L+ C G E + +L G +GL P S+ V+ CK
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 347 IGEPGMAYELM 357
+ +EL+
Sbjct: 491 ERKLVHVFELL 501
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
+N +A + C G++ + + GL LD YT+L++ FC E D+A K+L E
Sbjct: 304 YNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGE 363
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT---WGGD 199
M TYN ++R E R EA +L G+ + Y I+ G
Sbjct: 364 MKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNG- 422
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
EL+ A++F + M E+GI PH T++ L+V LC + LR GL G
Sbjct: 423 ---ELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPK 479
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAI 284
++ +++ + C E + VF L D++
Sbjct: 480 SWGAVVESICKERKLVHVFELLDSL 504
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 143/319 (44%), Gaps = 22/319 (6%)
Query: 60 RTEKDVGRIREVAEK-TNQKGLVSFNATATI--QDLCGKGRMXXXXXXXXXMNRKGLALD 116
+ E+D + ++ K + QKG NAT ++ +L + M +
Sbjct: 64 KRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQ 123
Query: 117 QRTYTSLIHMFCHQEEVDKAYKV--LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
+ + +L+ F + DK ++ L ++I R PS+ + + + V + +
Sbjct: 124 ESLFLNLMRHFSRSDLHDKVMEMFNLIQVIAR-VKPSLNAISTCLNLLIDSGEVNLSRKL 182
Query: 175 L-RVMADRGLSPDVDIYNTIITW---GGDQELELDTALEFKAKMVEKGI-LPHADTYSWL 229
L + GL P+ I+N ++ GD ++ A +M GI P++ TYS L
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGD----INFAFLVVEEMKRSGISYPNSITYSTL 238
Query: 230 IVSLCFERRLSEAFDLFREML-RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFL 288
+ L R EA +LF +M+ + G+S + ++N FC GE + + D +K
Sbjct: 239 MDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKK-- 296
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+P++ Y+AL+ G C +G+ +EA + + GL D V Y+T+++ FC+ G
Sbjct: 297 ----NGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNG 352
Query: 349 EPGMAYELMVEMNEKEIRG 367
E A +L+ EM R
Sbjct: 353 ETDEAMKLLGEMKASRCRA 371
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 134/323 (41%), Gaps = 12/323 (3%)
Query: 46 PESNKVSGLWNLKARTEK---DVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXX 102
P+S+ +S + N + K V + ++ + G + +N I+ +C +GR
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNI--IEGMCKEGRSEESL 494
Query: 103 XXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAY 162
M G+ Q T + + + A +L +M GF P + LV+
Sbjct: 495 KLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKL 554
Query: 163 CEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPH 222
CE R +A L +A G + + +T G + +D LE + G P
Sbjct: 555 CENGRAVDACKYLDDVAGEGFLGHM-VASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 223 ADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD 282
Y LI +LC R EA LF EM+ GL Y S+++ +C EGE +
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR------ 667
Query: 283 AIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
+ + + +P ++TY +LI+G C GR EA+ M P+ +++ +I
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQ 727
Query: 343 RFCKIGEPGMAYELMVEMNEKEI 365
CK G G A EM EKE+
Sbjct: 728 GLCKCGWSGEALVYFREMEEKEM 750
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 111/285 (38%), Gaps = 30/285 (10%)
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
+ K + D + + +I+ +VD A +L +++ G P YN ++ C+E R
Sbjct: 431 HNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRS 490
Query: 169 REAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
E+ +L M D G+ P N I ++ + AL+ KM G P ++
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAER-CDFVGALDLLKKMRFYGFEPWIKHTTF 549
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF----------------CLEG 272
L+ LC R +A ++ G A T+ ++ C G
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANG 609
Query: 273 EFSKVFHLHDAIKG------------FLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEAL 319
V H IK + V++ P++ TYN++I G C G + L
Sbjct: 610 HCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGL 669
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKE 364
+ M E +PD ++Y+++I C G P A EM K+
Sbjct: 670 SCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 129/299 (43%), Gaps = 30/299 (10%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F T +Q C G+ + +G LD+ T L+ FC +VDKA++++
Sbjct: 215 FTLTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCKWGQVDKAFELIEM 273
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
+ +R + TY L+ + +E R+ +A + M G++ D+ +Y+ +I G +
Sbjct: 274 LEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIG-GLCKHK 332
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFD-------------LFREM 249
+L+ AL ++ GI P L+ S E LS + L++ +
Sbjct: 333 DLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSL 392
Query: 250 LRGGLSTG--EPAYT---SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL-VTYN 303
G + AY+ +LM + +G V L D K LPD S SL + N
Sbjct: 393 FEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPD-----SDSLSIVIN 447
Query: 304 ALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
L+ + + + A+ +L + + GL P + Y+ +I CK G + +L+ EM +
Sbjct: 448 CLVKAN----KVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKD 502
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 16/225 (7%)
Query: 35 IPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCG 94
+ G G++ + + GL + ++ + R++ + +++++ I+ LC
Sbjct: 570 VAGEGFLGHMVASTAAIDGLIKNEG-VDRGLELFRDICANGHCPDVIAYHVL--IKALCK 626
Query: 95 KGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVAT 154
R M KGL TY S+I +C + E+D+ + M + +P V T
Sbjct: 627 ACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVIT 686
Query: 155 YNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT------WGGDQELELDTAL 208
Y L+ C R EA M + P+ + +I W G+ AL
Sbjct: 687 YTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGE-------AL 739
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
+ +M EK + P + Y L+ S ++ F +FREM+ G
Sbjct: 740 VYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 20/271 (7%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
++G D Y ++ + + ++ ++++ S + +R V
Sbjct: 99 QEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVD 158
Query: 170 EAAGILRVMADRGLS-PDVDIYNTI---ITWGGDQELELDTALEFKAK-MVEKGILPHAD 224
EA+ + + + GL P+ YN + I+ +EL +E + K M + G
Sbjct: 159 EASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVEL---VEARLKEMRDCGFHFDKF 215
Query: 225 TYSWLIVSLCFERRLSEAFDLFREML-RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA 283
T + ++ C + A +F E+L RG L E T L+ +FC G+ K F L +
Sbjct: 216 TLTPVLQVYCNTGKSERALSVFNEILSRGWLD--EHISTILVVSFCKWGQVDKAFELIEM 273
Query: 284 IKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
++ D + TY LI+G R ++A + M MG++ D Y +I
Sbjct: 274 LEE--RDIRLNYK----TYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGG 327
Query: 344 FCKIGEPGMAYELMVEMNEKEI---RGVLMK 371
CK + MA L +E+ I RG+L K
Sbjct: 328 LCKHKDLEMALSLYLEIKRSGIPPDRGILGK 358
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 9/251 (3%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
K + +D Y+ +++ + ++ A KV EM+ RGFS + Y VR CE+ V+E
Sbjct: 298 KNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKE 357
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELEL-DTALEFKAKMVEKGILPHADTYSWL 229
A +L M + G+SP + +N +I GG + LE+ MV +G++P ++ +
Sbjct: 358 AERLLSEMEESGVSPYDETFNCLI--GGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEM 415
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
+ S+ ++ A ++ + + G E Y+ L+ F +EG + A+K F
Sbjct: 416 VKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGF-IEGN-----DIDQALKLFYE 469
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
+ SP + +LI G C G+ E L+ M + + P+A Y +I F KIG+
Sbjct: 470 MEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGD 529
Query: 350 PGMAYELMVEM 360
A + EM
Sbjct: 530 KTNADRVYNEM 540
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 7/252 (2%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G L T +LIH + D +++ ID+ P+ T +++ C+E R++E
Sbjct: 194 GFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEV 253
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+L + + P V I NT + + +E+ ++ ++ +++ K ++ YS ++
Sbjct: 254 VDLLDRICGKRCLPSV-IVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVY 312
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
+ E L A +F EML+ G S YT + C +G+ + L ++
Sbjct: 313 AKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEE----- 367
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
+ SP T+N LI G G E+ L M GL P +++ ++ KI
Sbjct: 368 -SGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVN 426
Query: 352 MAYELMVEMNEK 363
A E++ + +K
Sbjct: 427 RANEILTKSIDK 438
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 3/209 (1%)
Query: 62 EKDVGRIREVAEKTNQKGLV--SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
E D+ R+V ++ Q+G SF T ++ C KG + M G++ T
Sbjct: 317 EGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDET 376
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
+ LI F +K + M+ RG PS + +N++V++ + + V A IL
Sbjct: 377 FNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSI 436
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
D+G PD Y+ +I G + ++D AL+ +M + + P + + LIV LC ++
Sbjct: 437 DKGFVPDEHTYSHLIR-GFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKV 495
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+ M + + Y +L+ AF
Sbjct: 496 EAGEKYLKIMKKRLIEPNADIYDALIKAF 524
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 120/283 (42%), Gaps = 43/283 (15%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA-- 172
++ + L+ F + V KA +VL EM GF P + L+ A C+ V++AA
Sbjct: 181 IEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL 240
Query: 173 --------------------GILRV------------MADRGLSPDVDIYNTIITWGGDQ 200
G RV M + G PD+ Y +++ G
Sbjct: 241 FEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLS-GYAN 299
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
++ A + M +G P+A+ Y+ LI +LC R+ EA +F EM R
Sbjct: 300 AGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVT 359
Query: 261 YTSLMNAFCLEGEFSKVF-HLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
YT+L++ FC G+ K + L D IK L PS +TY ++ H FEE L
Sbjct: 360 YTALVSGFCKWGKIDKCYIVLDDMIKKGL-------MPSELTYMHIMVAHEKKESFEECL 412
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
++ M ++ PD Y+ VI CK+GE A L EM E
Sbjct: 413 ELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEE 455
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T IQ LC RM M R D TYT+L+ FC ++DK Y VL +MI
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
+G PS TY ++ A+ +++ E ++ M PD+ IYN +I E+
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLG-EVK 444
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
A+ +M E G+ P DT+ +I L + L EA D F+EM+ GL
Sbjct: 445 EAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 50/261 (19%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T+ + C G+M MN G D YT+L+ + + ++ AY +L +M
Sbjct: 256 TSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRR 315
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT----WGGDQE 201
RGF P+ Y L++A C+ DR+ EA + M DV Y +++ WG
Sbjct: 316 RGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG---- 371
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
++D M++KG++P TY ++V+ + E +L +M +
Sbjct: 372 -KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ---------- 420
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGI 321
+ P + YN +I C +G +EA+ +
Sbjct: 421 -------------------------------IEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Query: 322 LRGMAEMGLSPDAVSYSTVIS 342
M E GLSP ++ +I+
Sbjct: 450 WNEMEENGLSPGVDTFVIMIN 470
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
+ +A ++ EM + G E + L++A C G + DA K F D RF +
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGS------VKDAAKLF-EDMRMRFPVN 251
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
L + +L+YG C +G+ EA +L M E G PD V Y+ ++S + G+ AY+L+
Sbjct: 252 LRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLR 311
Query: 359 EMNEK 363
+M +
Sbjct: 312 DMRRR 316
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 123/271 (45%), Gaps = 7/271 (2%)
Query: 96 GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATY 155
G++ M +G+ + +TY+ +I+ F ++ A+ V +M+ G P V Y
Sbjct: 498 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILY 557
Query: 156 NKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMV 215
N ++ A+C + A ++ M P + II G + ++ +LE M
Sbjct: 558 NNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH-GYAKSGDMRRSLEVFDMMR 616
Query: 216 EKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFS 275
G +P T++ LI L +R++ +A ++ EM G+S E YT +M + G+
Sbjct: 617 RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG 676
Query: 276 KVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAV 335
K F ++ D + TY AL+ C GR + AL + + M+ + ++
Sbjct: 677 KAFEYFTRLQNEGLDV------DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 336 SYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
Y+ +I + + G+ A +L+ +M ++ ++
Sbjct: 731 VYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 9/254 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M ++G+ D Y ++I FC +D+A + + EM P+ T+ ++ Y +
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+R + + +M G P V +N +I G ++ +++ A+E +M G+ + TY+
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLIN-GLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ +AF+ F + GL Y +L+ A C G
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL-------AV 716
Query: 288 LPDFVTRFSP-SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ R P + YN LI G G EA +++ M + G+ PD +Y++ IS K
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 347 IGEPGMAYELMVEM 360
G+ A + + EM
Sbjct: 777 AGDMNRATQTIEEM 790
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 140/366 (38%), Gaps = 100/366 (27%)
Query: 95 KGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVAT 154
+G M M +G+ R YTSLIH + ++D+A + +M + G S+ T
Sbjct: 322 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVT 381
Query: 155 YN-----------------------------------KLVRAYCEEDRVREAAGILRVMA 179
Y+ K++ A+C+ + A ++R M
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441
Query: 180 DRGLSPDVDIYN-----------------------------TIITWGGDQEL-----ELD 205
+ G+ + IY+ T++T+G L ++
Sbjct: 442 EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKIS 501
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
ALE M E+G+ + TYS +I + + AF +F +M++ G+ Y +++
Sbjct: 502 KALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII 561
Query: 266 NAFCLEG----------EFSKVFHLHDAIKGFLP------------------DFVTRFS- 296
+AFC G E K+ H + F+P D + R
Sbjct: 562 SAFCGMGNMDRAIQTVKEMQKLRH-RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620
Query: 297 -PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
P++ T+N LI G + E+A+ IL M G+S + +Y+ ++ + +G+ G A+E
Sbjct: 621 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680
Query: 356 LMVEMN 361
+
Sbjct: 681 YFTRLQ 686
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 10/283 (3%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I CG G M M + RT+ +IH + ++ ++ +V M G
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P+V T+N L+ E+ ++ +A IL M G+S + Y I+ G + A
Sbjct: 621 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ-GYASVGDTGKAF 679
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
E+ ++ +G+ TY L+ + C R+ A + +EM + Y L++ +
Sbjct: 680 EYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGW 739
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
G+ V+ D I+ + V P + TY + I G A + M +
Sbjct: 740 ARRGD---VWEAADLIQQMKKEGV---KPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Query: 329 GLSPDAVSYSTVISRFCKIGEPGMA---YELMVEMNEKEIRGV 368
G+ P+ +Y+T+I + + P A YE M M K + V
Sbjct: 794 GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 13/241 (5%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
++ + + ++ +A + M RG +P+ Y L+ AY + EA +R M + G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 183 LSPDVDIYNTIITWGGDQELELDTALEF---KAKMVEKGILPHADTYSWLIVSLCFERRL 239
+ + Y+ I+ GG + A ++ +AK + K + +A Y +I + C +
Sbjct: 375 IEMSLVTYSVIV--GGFSKAGHAEAADYWFDEAKRIHKTL--NASIYGKIIYAHCQTCNM 430
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
A L REM G+ Y ++M+ + + + K + +K F+P++
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE------CGFTPTV 484
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
VTY LI + +G+ +AL + R M E G+ + +YS +I+ F K+ + A+ + +
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 360 M 360
M
Sbjct: 545 M 545
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 106/266 (39%), Gaps = 7/266 (2%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I G M M R G T+ LI+ + +++KA ++L EM G
Sbjct: 596 IHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV 655
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
S + TY K+++ Y +A + + GL D+ Y ++ + + +AL
Sbjct: 656 SANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK-ACCKSGRMQSAL 714
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+M + I ++ Y+ LI + EA DL ++M + G+ YTS ++A
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
G+ ++ + ++ P++ TY LI G E+AL M M
Sbjct: 775 SKAGDMNRATQTIEEMEAL------GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAM 828
Query: 329 GLSPDAVSYSTVISRFCKIGEPGMAY 354
G+ PD Y +++ AY
Sbjct: 829 GIKPDKAVYHCLLTSLLSRASIAEAY 854
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 140/359 (38%), Gaps = 39/359 (10%)
Query: 20 VKTILRNRLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKAR--------------TEKDV 65
VK ++ ++ II F GN+ V + L+ R D+
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 66 GRIREVAEKTNQKGLV----SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
R EV + + G V +FN I L K +M M G++ ++ TYT
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGL--INGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
++ + + KA++ + + + G + TY L++A C+ R++ A + + M+ R
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
+ + +YN +I G + ++ A + +M ++G+ P TY+ I + ++
Sbjct: 724 NIPRNSFVYNILID-GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNR 782
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVT 301
A EM G+ YT+L+ + K ++ +K P
Sbjct: 783 ATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAM------GIKPDKAV 836
Query: 302 YNALIYGHCCMGRFEEA------LGILRGMAEMGLSPD---AVSYSTVISRFCKIGEPG 351
Y+ L+ EA + I + M E GL D AV +S + CKI G
Sbjct: 837 YHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCL---CKIEASG 892
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 124/280 (44%), Gaps = 7/280 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
A + L G+GR+ M R ++ + T ++ +C ++DK ++L +M
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
GF + +YN L+ +CE+ + A + +M GL P+V +NT+I G + ++L
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLI-HGFCRAMKLQ 325
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A + +M + P+ TY+ LI + AF + +M+ G+ Y +L+
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
C + + K + P+ T++ALI G C + + + M
Sbjct: 386 FGLCKQAKTRKAAQFVKELDK------ENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
G P+ +++ ++S FC+ + A +++ EM + I
Sbjct: 440 IRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 7/273 (2%)
Query: 93 CGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSV 152
C G++ M R G +Y +LI C + + A K+ + M G P+V
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNV 308
Query: 153 ATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKA 212
T+N L+ +C +++EA+ + M ++P+ YNT+I G Q+ + + A F
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN-GYSQQGDHEMAFRFYE 367
Query: 213 KMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG 272
MV GI TY+ LI LC + + +A +E+ + L +++L+ C+
Sbjct: 368 DMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 273 EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSP 332
+ F L+ ++ + P+ T+N L+ C F+ A +LR M +
Sbjct: 428 NADRGFELYKSM------IRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 333 DAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
D+ + V + G+ + +L+ EM K+
Sbjct: 482 DSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 110/264 (41%), Gaps = 14/264 (5%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
R + SL F H ++ A +M D GF P+V + N + + + RV A R
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M +SP+ N +++ G + +LD +E M G +Y+ LI C +
Sbjct: 229 MRRCKISPNPYTLNMVMS-GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
LS A L M + GL + +L++ FC + L +A K F +P
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC------RAMKLQEASKVFGEMKAVNVAP 341
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+ VTYN LI G+ G E A M G+ D ++Y+ +I CK + A + +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 358 VEM-------NEKEIRGVLMKSCI 374
E+ N ++M C+
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCV 425
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 77 QKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
Q+ ++++NA I LC + + ++++ L + T+++LI C ++ D+
Sbjct: 375 QRDILTYNAL--IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV----DIYNT 192
+++ MI G P+ T+N LV A+C + A+ +LR M R + D + N
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Query: 193 IITWGGDQ 200
+ G DQ
Sbjct: 493 LKHQGKDQ 500
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 124/280 (44%), Gaps = 7/280 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
A + L G+GR+ M R ++ + T ++ +C ++DK ++L +M
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
GF + +YN L+ +CE+ + A + +M GL P+V +NT+I G + ++L
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLI-HGFCRAMKLQ 325
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A + +M + P+ TY+ LI + AF + +M+ G+ Y +L+
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
C + + K + P+ T++ALI G C + + + M
Sbjct: 386 FGLCKQAKTRKAAQFVKELDK------ENLVPNSSTFSALIMGQCVRKNADRGFELYKSM 439
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
G P+ +++ ++S FC+ + A +++ EM + I
Sbjct: 440 IRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 7/273 (2%)
Query: 93 CGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSV 152
C G++ M R G +Y +LI C + + A K+ + M G P+V
Sbjct: 249 CRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNV 308
Query: 153 ATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKA 212
T+N L+ +C +++EA+ + M ++P+ YNT+I G Q+ + + A F
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN-GYSQQGDHEMAFRFYE 367
Query: 213 KMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG 272
MV GI TY+ LI LC + + +A +E+ + L +++L+ C+
Sbjct: 368 DMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 273 EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSP 332
+ F L+ ++ + P+ T+N L+ C F+ A +LR M +
Sbjct: 428 NADRGFELYKSM------IRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 333 DAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
D+ + V + G+ + +L+ EM K+
Sbjct: 482 DSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 110/264 (41%), Gaps = 14/264 (5%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
R + SL F H ++ A +M D GF P+V + N + + + RV A R
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M +SP+ N +++ G + +LD +E M G +Y+ LI C +
Sbjct: 229 MRRCKISPNPYTLNMVMS-GYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
LS A L M + GL + +L++ FC + L +A K F +P
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFC------RAMKLQEASKVFGEMKAVNVAP 341
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+ VTYN LI G+ G E A M G+ D ++Y+ +I CK + A + +
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 358 VEM-------NEKEIRGVLMKSCI 374
E+ N ++M C+
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCV 425
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 77 QKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
Q+ ++++NA I LC + + ++++ L + T+++LI C ++ D+
Sbjct: 375 QRDILTYNAL--IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV----DIYNT 192
+++ MI G P+ T+N LV A+C + A+ +LR M R + D + N
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Query: 193 IITWGGDQ 200
+ G DQ
Sbjct: 493 LKHQGKDQ 500
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 129/302 (42%), Gaps = 12/302 (3%)
Query: 62 EKDVGRIREVAEKTNQKG--LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
+K G I + + Q G L S A I G M M GL T
Sbjct: 93 QKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRG---FSPSVATYNKLVRAYCEEDRVREAAGILR 176
Y +LI + + +++ ++L M++ G P++ T+N LV+A+C++ +V EA +++
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212
Query: 177 VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK-GILPHADTYSWLIVSLCF 235
M + G+ PD YNTI T + + E KMV K P+ T ++ C
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
E R+ + R M + + SL+N F + + + +K
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKE------CNV 326
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
++TY+ ++ G E+A + + M + G+ PDA +YS + + + EP A E
Sbjct: 327 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 386
Query: 356 LM 357
L+
Sbjct: 387 LL 388
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 124/280 (44%), Gaps = 45/280 (16%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKL----------VRA------ 161
RT+ L+ +C +++V++A++V+ +M + G P TYN + VRA
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 162 ---------------------YCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
YC E RVR+ +R M + + ++ ++N++I G +
Sbjct: 249 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN-GFVE 307
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
++ D E M E + TYS ++ + + +A +F+EM++ G+ A
Sbjct: 308 VMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 367
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
Y+ L + E K L L + P++V + +I G C G ++A+
Sbjct: 368 YSILAKGYVRAKEPKKAEEL-------LETLIVESRPNVVIFTTVISGWCSNGSMDDAMR 420
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
+ M + G+SP+ ++ T++ + ++ +P A E++ M
Sbjct: 421 VFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 460
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 7/230 (3%)
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW 196
Y+ ++ +V + KL+ E R EA + + +A+ G P + Y T++
Sbjct: 30 YRFCKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAA 89
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
Q+ + + +++ + G + ++ +I + + +A +M GL+
Sbjct: 90 MTVQK-QYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNP 148
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE 316
Y +L+ + + G+ + L D + L + P++ T+N L+ C + E
Sbjct: 149 TTSTYNTLIKGYGIAGKPERSSELLDLM---LEEGNVDVGPNIRTFNVLVQAWCKKKKVE 205
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE---MNEK 363
EA +++ M E G+ PD V+Y+T+ + + + GE A +VE M EK
Sbjct: 206 EAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEK 255
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 214 MVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
+ E G P +Y+ L+ ++ +++ + E+ + G + +++NAF G
Sbjct: 71 LAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESG- 129
Query: 274 FSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG---L 330
++ DA++ L +P+ TYN LI G+ G+ E + +L M E G +
Sbjct: 130 -----NMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDV 184
Query: 331 SPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
P+ +++ ++ +CK + A+E++ +M E +R
Sbjct: 185 GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 119/285 (41%), Gaps = 8/285 (2%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
+FN + C M +G D TY +L+ +C + + +A+ +
Sbjct: 238 TFNILTNV--FCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYK 295
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
M R P + TY L++ C++ RVREA M DRG+ PD YNT+I + +E
Sbjct: 296 IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLI-YAYCKE 354
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
+ + + +M+ ++P T ++ E RL A + E+ R +
Sbjct: 355 GMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVC 414
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGI 321
L+ + C EG+ HL D I + + P TYN LI EEAL +
Sbjct: 415 DFLIVSLCQEGKPFAAKHLLDRI---IEEEGHEAKPE--TYNNLIESLSRCDAIEEALVL 469
Query: 322 LRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ DA +Y +I C+IG A LM EM + E++
Sbjct: 470 KGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVK 514
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 11/254 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR-GFSPSVATYNKLVRAYCEED 166
++ K L + LI + +EEVD ++VL D + P V ++ LV+ Y +
Sbjct: 124 VSSKKFPLAMQFLCELIELTSKKEEVD-VFRVLVSATDECNWDPVV--FDMLVKGYLKLG 180
Query: 167 RVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTY 226
V E + R + D G S V N ++ + ++ + + M GI P+ T+
Sbjct: 181 LVEEGFRVFREVLDSGFSVSVVTCNHLLNGLL-KLDLMEDCWQVYSVMCRVGIHPNTYTF 239
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG 286
+ L C + E D +M G Y +L++++C G + F+L+ +
Sbjct: 240 NILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIM-- 297
Query: 287 FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ R P LVTY +LI G C GR EA M + G+ PD +SY+T+I +CK
Sbjct: 298 ----YRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCK 353
Query: 347 IGEPGMAYELMVEM 360
G + +L+ EM
Sbjct: 354 EGMMQQSKKLLHEM 367
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 133 VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT 192
V++ ++V E++D GFS SV T N L+ + D + + + VM G+ P+ +N
Sbjct: 182 VEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNI 241
Query: 193 II-TWGGDQEL-ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREML 250
+ + D E+D LE KM E+G P TY+ L+ S C RL EAF L++ M
Sbjct: 242 LTNVFCNDSNFREVDDFLE---KMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 251 RGGLSTGEPAYTSLMNAFCLEG---EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIY 307
R + YTSL+ C +G E + FH +G PD ++YN LIY
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFH-RMVDRGIKPD--------CMSYNTLIY 349
Query: 308 GHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
+C G +++ +L M + PD + ++ F + G A +VE+
Sbjct: 350 AYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL 402
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 19/310 (6%)
Query: 44 LQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKG----LVSFNATATIQDLCGKGRMX 99
+ P + + L N+ + + + + EK ++G LV++N + C +GR+
Sbjct: 232 IHPNTYTFNILTNVFC-NDSNFREVDDFLEKMEEEGFEPDLVTYNTL--VSSYCRRGRLK 288
Query: 100 XXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLV 159
M R+ + D TYTSLI C V +A++ M+DRG P +YN L+
Sbjct: 289 EAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLI 348
Query: 160 RAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGI 219
AYC+E ++++ +L M + PD +I G +E L +A+ F ++ +
Sbjct: 349 YAYCKEGMMQQSKKLLHEMLGNSVVPD-RFTCKVIVEGFVREGRLLSAVNFVVELRRLKV 407
Query: 220 LPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP-AYTSLMNAFCLEGEFSKVF 278
+ +LIVSLC E + A L ++ +P Y +L+ + S+
Sbjct: 408 DIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIES------LSRCD 461
Query: 279 HLHDA--IKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVS 336
+ +A +KG L + TY ALI C +GR EA ++ M + + PD+
Sbjct: 462 AIEEALVLKGKLKNQNQVLDAK--TYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFI 519
Query: 337 YSTVISRFCK 346
++ +CK
Sbjct: 520 CGALVYGYCK 529
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 117 QRTYTSLIHMFCHQEE--VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
+ T+ L+ C + + ++VL+ M++ G P T + VR+ CE RV EA +
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK-GILPHADTYSWLIVSL 233
++ + ++ PD YN ++ + +L EF +M + + P +++ LI ++
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCK-DLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 234 CFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDF 291
C + L EA L ++ G Y ++M FC + S+ ++ +K G PD
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD- 299
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+TYN LI+G GR EEA L+ M + G PD +Y+++++ C+ G
Sbjct: 300 -------QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 10/189 (5%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR-G 147
++ LC GR+ + K D TY L+ C +++ Y+ + EM D
Sbjct: 166 VRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFD 225
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII----TWGGDQELE 203
P + ++ L+ C +REA ++ + + G PD +YNTI+ T E
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE-- 283
Query: 204 LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTS 263
A+ KM E+G+ P TY+ LI L R+ EA + M+ G YTS
Sbjct: 284 ---AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 264 LMNAFCLEG 272
LMN C +G
Sbjct: 341 LMNGMCRKG 349
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 5/152 (3%)
Query: 214 MVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
MV G+ P T + SLC R+ EA DL +E+ Y L+ C +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 274 FSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPD 333
V+ D ++ DF + P LV++ LI C EA+ ++ + G PD
Sbjct: 210 LHVVYEFVDEMRD---DFDVK--PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 334 AVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
Y+T++ FC + + A + +M E+ +
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 77 QKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKA 136
+ LVSF T I ++C + + G D Y +++ FC + +A
Sbjct: 227 KPDLVSF--TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEA 284
Query: 137 YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
V +M + G P TYN L+ + RV EA L+ M D G PD Y +++
Sbjct: 285 VGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 11/259 (4%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
+ G D TYT+++ ++ + K+L EM+ G P+ TYN+L+ +Y + ++
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
EA + M + G PD Y T+I LD A++ +M E G+ P TYS +
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
I L L A LF EM+ G+ +L+ + +K + A+K +
Sbjct: 471 INCLGKAGHLPAAHRLFCEMV------GQGCTPNLVTFNIMIALHAKARNYETALKLYRD 524
Query: 290 DFVTRFSPSLVTYNAL--IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
F P VTY+ + + GHC G EEA G+ M PD Y ++ + K
Sbjct: 525 MQNAGFQPDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKA 582
Query: 348 GEPGMAYELMVEMNEKEIR 366
G A++ M + +R
Sbjct: 583 GNVDKAWQWYQAMLQAGLR 601
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 7/235 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G D+ TY +LI + +D A + M + G SP TY+ ++ +
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ A + M +G +P++ +N +I + +TAL+ M G P TYS
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHA-KARNYETALKLYRDMQNAGFQPDKVTYS 538
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ L L EA +F EM R EP Y L++ + G K + + A+
Sbjct: 539 IVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM--- 595
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
P++ T N+L+ + R EA +L+ M +GL P +Y+ ++S
Sbjct: 596 ---LQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 9/204 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M GL+ D TY+ +I+ + A+++ EM+ +G +P++ T+N ++ + +
Sbjct: 455 MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARN 514
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
A + R M + G PD Y+ ++ G L+ A A+M K +P Y
Sbjct: 515 YETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF-LEEAEGVFAEMQRKNWVPDEPVYG 573
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L+ + +A+ ++ ML+ GL P SL++ F S+ ++L ++
Sbjct: 574 LLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM--- 630
Query: 288 LPDFVTRFSPSLVTYNALIYGHCC 311
PSL TY L+ CC
Sbjct: 631 ---LALGLHPSLQTYTLLL--SCC 649
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 3/186 (1%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
+F + I L G + M +G + T+ +I + + A K+
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYR 523
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT-WGGDQ 200
+M + GF P TY+ ++ + EA G+ M + PD +Y ++ WG +
Sbjct: 524 DMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWG--K 581
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
+D A ++ M++ G+ P+ T + L+ + R+SEA++L + ML GL
Sbjct: 582 AGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQT 641
Query: 261 YTSLMN 266
YT L++
Sbjct: 642 YTLLLS 647
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M RK D+ Y L+ ++ VDKA++ M+ G P+V T N L+ + R
Sbjct: 560 MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR 619
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
+ EA +L+ M GL P + Y +++ D D
Sbjct: 620 MSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFD 657
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 107/243 (44%), Gaps = 16/243 (6%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D TY LIH D A K+ EM+ + P+ T+ L+ C++ RV+EA +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 176 RVMAD-RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
M G+ P V IY ++I Q EL A + K + E I A YS LI SL
Sbjct: 211 HDMLKVYGVRPTVHIYASLIK-ALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFV 292
R +E + EM G Y L+N FC+E + + D + KG PD
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD-- 327
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
+++YN ++ + ++EEA + M G SPD +SY V C+ G+
Sbjct: 328 ------VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCE----GL 377
Query: 353 AYE 355
+E
Sbjct: 378 QFE 380
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 87/184 (47%), Gaps = 10/184 (5%)
Query: 185 PDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFD 244
PD YN +I G Q D AL+ +MV+K + P T+ LI LC + R+ EA
Sbjct: 150 PDACTYNILI-HGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 245 LFREMLR-GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD-AIKGFLPDFVTRFSPSLVTY 302
+ +ML+ G+ Y SL+ A C GE S F L D A +G + Y
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG-------KIKVDAAIY 261
Query: 303 NALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
+ LI GR E IL M+E G PD V+Y+ +I+ FC + A ++ EM E
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 363 KEIR 366
K ++
Sbjct: 322 KGLK 325
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ I L GR M+ KG D TY LI+ FC + + + A +VL EM++
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
+G P V +YN ++ + + EA + M RG SPD Y I+ G + L+ +
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYR-IVFDGLCEGLQFE 380
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A +M+ KG P D + LC +L E L G++ ++ ++
Sbjct: 381 EAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKL-EILSKVISSLHRGIAGDADVWSVMI 439
Query: 266 NAFCLEGEFSKVFHL 280
C E S L
Sbjct: 440 PTMCKEPVISDSIDL 454
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ I+ LC G + + +D Y++LI ++ +L EM +
Sbjct: 227 ASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSE 286
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-TWGGDQELEL 204
+G P TYN L+ +C E+ A +L M ++GL PDV YN I+ + ++ E
Sbjct: 287 KGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEE 346
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
T L F+ M +G P +Y + LC + EA + EML G
Sbjct: 347 ATYL-FE-DMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGF 404
Query: 265 MNAFCLEGE---FSKVF-HLHDAIKG 286
+ C G+ SKV LH I G
Sbjct: 405 LQKLCESGKLEILSKVISSLHRGIAG 430
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 131/306 (42%), Gaps = 11/306 (3%)
Query: 62 EKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
E+ VG + E +K S N + LC + R+ + + + + T+
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLL--LDTLCKEKRVEQARVVLLQL-KSHITPNAHTFN 228
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
IH +C V++A + EM GF P V +Y ++R YC++ + +L M
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
G P+ Y TI++ Q+ E + AL +M G P + Y+ LI +L RL E
Sbjct: 289 GSPPNSITYTTIMSSLNAQK-EFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 242 AFDLFR-EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLV 300
A +FR EM G+S Y S++ +C E K L ++ +P +
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES-----SNLCNPDVH 402
Query: 301 TYNALIYGHCCMGRFEEALGILRGM-AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
TY L+ G E +L+ M + LS D +Y+ +I R C+ AY L E
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 360 MNEKEI 365
M ++I
Sbjct: 463 MISQDI 468
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 99/248 (39%), Gaps = 12/248 (4%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I C R+ M G +YT++I +C Q E K Y++LSEM G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-TWGGDQELELDTA 207
P+ TY ++ + + EA + M G PD YN +I T LE +
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE-EAE 349
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE-PAYTSLMN 266
F+ +M E G+ + TY+ +I C +A +L +EM L + Y L+
Sbjct: 350 RVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR 409
Query: 267 AFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL--VTYNALIYGHCCMGRFEEALGILRG 324
+ G+ +V L L + VT+ SL TY LI C E A +
Sbjct: 410 SCFKRGDVVEVGKL-------LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 325 MAEMGLSP 332
M ++P
Sbjct: 463 MISQDITP 470
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 13/229 (5%)
Query: 134 DKAYKVLS-EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD-RGLSPDVDIYN 191
D +K LS + I + + S +KL+ + D R A GIL+ +G D Y+
Sbjct: 68 DDVFKRLSSDEICKRVNLSDGLVHKLLHRF--RDDWRSALGILKWAESCKGHKHSSDAYD 125
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
+ G + + D EF +M ++ +T + ++ EA +F +
Sbjct: 126 MAVDILGKAK-KWDRMKEFVERMRGDKLVT-LNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCC 311
GL + L++ C E + + L + +P+ T+N I+G C
Sbjct: 184 FGLEKNTESMNLLLDTLCKEKRVEQA-------RVVLLQLKSHITPNAHTFNIFIHGWCK 236
Query: 312 MGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
R EEAL ++ M G P +SY+T+I +C+ E YE++ EM
Sbjct: 237 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 131/306 (42%), Gaps = 11/306 (3%)
Query: 62 EKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
E+ VG + E +K S N + LC + R+ + + + + T+
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLL--LDTLCKEKRVEQARVVLLQL-KSHITPNAHTFN 228
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
IH +C V++A + EM GF P V +Y ++R YC++ + +L M
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
G P+ Y TI++ Q+ E + AL +M G P + Y+ LI +L RL E
Sbjct: 289 GSPPNSITYTTIMSSLNAQK-EFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 242 AFDLFR-EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLV 300
A +FR EM G+S Y S++ +C E K L ++ +P +
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES-----SNLCNPDVH 402
Query: 301 TYNALIYGHCCMGRFEEALGILRGM-AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
TY L+ G E +L+ M + LS D +Y+ +I R C+ AY L E
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 360 MNEKEI 365
M ++I
Sbjct: 463 MISQDI 468
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 99/248 (39%), Gaps = 12/248 (4%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I C R+ M G +YT++I +C Q E K Y++LSEM G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-TWGGDQELELDTA 207
P+ TY ++ + + EA + M G PD YN +I T LE +
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLE-EAE 349
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE-PAYTSLMN 266
F+ +M E G+ + TY+ +I C +A +L +EM L + Y L+
Sbjct: 350 RVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR 409
Query: 267 AFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL--VTYNALIYGHCCMGRFEEALGILRG 324
+ G+ +V L L + VT+ SL TY LI C E A +
Sbjct: 410 SCFKRGDVVEVGKL-------LKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 325 MAEMGLSP 332
M ++P
Sbjct: 463 MISQDITP 470
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 13/229 (5%)
Query: 134 DKAYKVLS-EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD-RGLSPDVDIYN 191
D +K LS + I + + S +KL+ + D R A GIL+ +G D Y+
Sbjct: 68 DDVFKRLSSDEICKRVNLSDGLVHKLLHRF--RDDWRSALGILKWAESCKGHKHSSDAYD 125
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
+ G + + D EF +M ++ +T + ++ EA +F +
Sbjct: 126 MAVDILGKAK-KWDRMKEFVERMRGDKLVT-LNTVAKIMRRFAGAGEWEEAVGIFDRLGE 183
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCC 311
GL + L++ C E + + L + +P+ T+N I+G C
Sbjct: 184 FGLEKNTESMNLLLDTLCKEKRVEQA-------RVVLLQLKSHITPNAHTFNIFIHGWCK 236
Query: 312 MGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
R EEAL ++ M G P +SY+T+I +C+ E YE++ EM
Sbjct: 237 ANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 108/237 (45%), Gaps = 19/237 (8%)
Query: 135 KAYK----VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIY 190
K YK V +M++ GFSP V TYN L+ ++ + MA G SPD Y
Sbjct: 233 KQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTY 292
Query: 191 NTI--ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFRE 248
N + I G++ L T L M E GI P Y+ LI L L E
Sbjct: 293 NILLHILGKGNKPLAALTTLN---HMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDE 349
Query: 249 MLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD--AIKGFLPDFVTRFSPSLVTYNALI 306
M++ G YT ++ + + GE K + +KG LP+ + TYN++I
Sbjct: 350 MVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPN--------VFTYNSMI 401
Query: 307 YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
G C G F EA +L+ M G +P+ V YST++S K G+ A +++ EM +K
Sbjct: 402 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 13/257 (5%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
A + L G + M G + D TY L+ ++D+ ++ EM
Sbjct: 223 NAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMAR 282
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
GFSP TYN L+ + ++ A L M + G+ P V Y T+I G + L+
Sbjct: 283 DGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLID-GLSRAGNLE 341
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
F +MV+ G P Y+ +I L +A ++FREM G Y S++
Sbjct: 342 ACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRG 324
C+ GEF + L L + +R +P+ V Y+ L+ G+ EA ++R
Sbjct: 402 RGLCMAGEFREACWL-------LKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Query: 325 MAEMG----LSPDAVSY 337
M + G L P + Y
Sbjct: 455 MVKKGHYVHLVPKMMKY 471
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 11/259 (4%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
+ G D TYT+++ ++ K+L EM+ G P+ TYN+L+ +Y + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
EA + M + G PD Y T+I LD A++ +M G+ P TYS +
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
I L L A LF EM+ G + Y +M+ +K + +A+K +
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL------HAKARNYQNALKLYRD 529
Query: 290 DFVTRFSPSLVTYNAL--IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
F P VTY+ + + GHC G EEA + M + PD Y ++ + K
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 348 GEPGMAYELMVEMNEKEIR 366
G A++ M +R
Sbjct: 588 GNVEKAWQWYQAMLHAGLR 606
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 7/235 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G D+ TY +LI + +D A + M G SP TY+ ++ +
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ A + M D+G +P++ YN ++ + AL+ M G P TYS
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA-KARNYQNALKLYRDMQNAGFEPDKVTYS 543
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ L L EA +F EM + EP Y L++ + G K + + A+
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM--- 600
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
P++ T N+L+ + + EA +L+ M +GL P +Y+ ++S
Sbjct: 601 ---LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 10/215 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M GL+ D TY+ +I+ + A+K+ EM+D+G +P++ TYN ++ + +
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ A + R M + G PD Y+ ++ G L+ A +M +K +P Y
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY-LEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L+ + +A+ ++ ML GL P SL++ F + ++ + L +
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM--- 635
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCM-GRFEEALGI 321
PSL TY L+ CC GR + +G
Sbjct: 636 ---LALGLRPSLQTYTLLL--SCCTDGRSKLDMGF 665
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 4/192 (2%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
+F + I L G + M +G + TY ++ + A K+
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT-WGGDQ 200
+M + GF P TY+ ++ + EA + M + PD +Y ++ WG
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
+E A ++ M+ G+ P+ T + L+ + +++EA++L + ML GL
Sbjct: 589 NVE--KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQT 646
Query: 261 YTSLMNAFCLEG 272
YT L++ C +G
Sbjct: 647 YTLLLSC-CTDG 657
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 11/259 (4%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
+ G D TYT+++ ++ K+L EM+ G P+ TYN+L+ +Y + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
EA + M + G PD Y T+I LD A++ +M G+ P TYS +
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
I L L A LF EM+ G + Y +M+ +K + +A+K +
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL------HAKARNYQNALKLYRD 529
Query: 290 DFVTRFSPSLVTYNAL--IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
F P VTY+ + + GHC G EEA + M + PD Y ++ + K
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 348 GEPGMAYELMVEMNEKEIR 366
G A++ M +R
Sbjct: 588 GNVEKAWQWYQAMLHAGLR 606
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 7/235 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G D+ TY +LI + +D A + M G SP TY+ ++ +
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ A + M D+G +P++ YN ++ + AL+ M G P TYS
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA-KARNYQNALKLYRDMQNAGFEPDKVTYS 543
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ L L EA +F EM + EP Y L++ + G K + + A+
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM--- 600
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
P++ T N+L+ + + EA +L+ M +GL P +Y+ ++S
Sbjct: 601 ---LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 10/215 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M GL+ D TY+ +I+ + A+K+ EM+D+G +P++ TYN ++ + +
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ A + R M + G PD Y+ ++ G L+ A +M +K +P Y
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY-LEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L+ + +A+ ++ ML GL P SL++ F + ++ + L +
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM--- 635
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCM-GRFEEALGI 321
PSL TY L+ CC GR + +G
Sbjct: 636 ---LALGLRPSLQTYTLLL--SCCTDGRSKLDMGF 665
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 4/192 (2%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
+F + I L G + M +G + TY ++ + A K+
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT-WGGDQ 200
+M + GF P TY+ ++ + EA + M + PD +Y ++ WG
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
+E A ++ M+ G+ P+ T + L+ + +++EA++L + ML GL
Sbjct: 589 NVE--KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQT 646
Query: 261 YTSLMNAFCLEG 272
YT L++ C +G
Sbjct: 647 YTLLLSC-CTDG 657
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 11/259 (4%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
+ G D TYT+++ ++ K+L EM+ G P+ TYN+L+ +Y + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
EA + M + G PD Y T+I LD A++ +M G+ P TYS +
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF-LDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
I L L A LF EM+ G + Y +M+ +K + +A+K +
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL------HAKARNYQNALKLYRD 529
Query: 290 DFVTRFSPSLVTYNAL--IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
F P VTY+ + + GHC G EEA + M + PD Y ++ + K
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 348 GEPGMAYELMVEMNEKEIR 366
G A++ M +R
Sbjct: 588 GNVEKAWQWYQAMLHAGLR 606
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 7/235 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G D+ TY +LI + +D A + M G SP TY+ ++ +
Sbjct: 425 MQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGH 484
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ A + M D+G +P++ YN ++ + AL+ M G P TYS
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA-KARNYQNALKLYRDMQNAGFEPDKVTYS 543
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++ L L EA +F EM + EP Y L++ + G K + + A+
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM--- 600
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
P++ T N+L+ + + EA +L+ M +GL P +Y+ ++S
Sbjct: 601 ---LHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 10/215 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M GL+ D TY+ +I+ + A+K+ EM+D+G +P++ TYN ++ + +
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ A + R M + G PD Y+ ++ G L+ A +M +K +P Y
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY-LEEAEAVFTEMQQKNWIPDEPVYG 578
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L+ + +A+ ++ ML GL P SL++ F + ++ + L +
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM--- 635
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCM-GRFEEALGI 321
PSL TY L+ CC GR + +G
Sbjct: 636 ---LALGLRPSLQTYTLLL--SCCTDGRSKLDMGF 665
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 4/192 (2%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
+F + I L G + M +G + TY ++ + A K+
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYR 528
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT-WGGDQ 200
+M + GF P TY+ ++ + EA + M + PD +Y ++ WG
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
+E A ++ M+ G+ P+ T + L+ + +++EA++L + ML GL
Sbjct: 589 NVE--KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQT 646
Query: 261 YTSLMNAFCLEG 272
YT L++ C +G
Sbjct: 647 YTLLLSC-CTDG 657
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 8/254 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M KG+ D+ + LI + V ++ K+ +M D G ++ +YN L + R
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
A M G+ P YN ++ WG L L+TAL F M +GI P T++
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYN-LMLWGFFLSLRLETALRFFEDMKTRGISPDDATFN 294
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
+I C +++ EA LF EM + +YT+++ + V + D ++ F
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYL------AVDRVDDGLRIF 348
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSP-DAVSYSTVISRFCK 346
+ P+ TY+ L+ G C G+ EA IL+ M ++P D + ++ K
Sbjct: 349 EEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSK 408
Query: 347 IGEPGMAYELMVEM 360
G+ A E++ M
Sbjct: 409 AGDMAAATEVLKAM 422
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 12/266 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +G++ D T+ ++I+ FC +++D+A K+ EM PSV +Y +++ Y DR
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADT-Y 226
V + I M G+ P+ Y+T++ D ++ A M+ K I P ++ +
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAG-KMVEAKNILKNMMAKHIAPKDNSIF 399
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG 286
L+VS ++ A ++ + M + Y L+ C +++ L D +
Sbjct: 400 LKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTL-- 457
Query: 287 FLPDFVTRFSPSL----VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
+ + R +L YN +I C G+ +A + R + + G+ D + + +I
Sbjct: 458 IEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIR 516
Query: 343 RFCKIGEPGMAYELMVEMNEKEIRGV 368
K G P +YE++ M+ RGV
Sbjct: 517 GHAKEGNPDSSYEILKIMSR---RGV 539
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 146/357 (40%), Gaps = 44/357 (12%)
Query: 33 VIIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDL 92
V+I + AG +Q ES K+ + KD+G R + S+N+ + +
Sbjct: 190 VLIESYGKAGIVQ-ESVKI-------FQKMKDLGVERTIK---------SYNSLFKV--I 230
Query: 93 CGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSV 152
+GR M +G+ + TY ++ F ++ A + +M RG SP
Sbjct: 231 LRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDD 290
Query: 153 ATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKA 212
AT+N ++ +C ++ EA + M + P V Y T+I G +D L
Sbjct: 291 ATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIK-GYLAVDRVDDGLRIFE 349
Query: 213 KMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA-YTSLMNAFCLE 271
+M GI P+A TYS L+ LC ++ EA ++ + M+ ++ + + + L+ +
Sbjct: 350 EMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKA 409
Query: 272 GEFSKVFHLHDAIKGFLPDFVTRFSPSLV-TYNALIYGHCCMGRFEEALG---------- 320
G+ + A L T P+ Y LI C + A+
Sbjct: 410 GDMA-------AATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEI 462
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLMKSCINHL 377
ILR + + P A Y+ +I C G+ A L ++ + RGV + +N+L
Sbjct: 463 ILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQLMK---RGVQDQDALNNL 514
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 214 MVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
M EKG+ D + LI S + E+ +F++M G+ +Y SL G
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 274 FSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSP 332
+ K + V+ P+ TYN +++G R E AL M G+SP
Sbjct: 236 YMMA-------KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISP 288
Query: 333 DAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
D +++T+I+ FC+ + A +L VEM +I
Sbjct: 289 DDATFNTMINGFCRFKKMDEAEKLFVEMKGNKI 321
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 25/259 (9%)
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
L ++ Y +I C+ + KA + +++ RG A N L+R + +E +
Sbjct: 470 LEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDA-LNNLIRGHAKEGNPDSSY 528
Query: 173 GILRVMADRGLSPDVDIYNTIITW------GGDQELELDTALEFKAKMVEKGILPHADTY 226
IL++M+ RG+ + + Y +I GD + LD+ MVE G +P + +
Sbjct: 529 EILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDS-------MVEDGHVPDSSLF 581
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRG--GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI 284
+I SL + R+ A + M+ G+ ++ A + G H+ +A+
Sbjct: 582 RSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRG------HVEEAL 635
Query: 285 KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRF 344
D + + + ++L+ G+ AL +L E LS + SY V+
Sbjct: 636 GRI--DLLNQ-NGHTADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDAL 692
Query: 345 CKIGEPGMAYELMVEMNEK 363
G+ AY ++ ++ EK
Sbjct: 693 LGAGKTLNAYSVLCKIMEK 711
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M R G + TYT LI VD+AY +M+ G +P V N L+ + R
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V E + M +P V YNT+I + + + + KM + P TYS
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI C R+ +A L EM G AY SL+NA + L +K
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
+ +R ++ + +G C G+ EA+ + M G PD +Y+ ++S K
Sbjct: 474 FGNVSSRVYAVMIKH----FGKC--GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Query: 348 GEPGMAYELMVEMNEKEIRG 367
G A L+ +M E R
Sbjct: 528 GMINEANSLLRKMEENGCRA 547
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 118/275 (42%), Gaps = 32/275 (11%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFS-PSVATYNKLVRAYCEEDRVREAAGILRV 177
TY S+I M + + +K ++V +EM + G P TY+ L+ +Y + R A +
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M D + P IY T++ + +++ AL+ +M G P TY+ LI L
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYF-KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG---EFSKVF---------------- 278
R+ EA+ +++MLR GL+ +LMN G E + VF
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYN 377
Query: 279 -----------HLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAE 327
H+ + F SPS TY+ LI G+C R E+AL +L M E
Sbjct: 378 TVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDE 437
Query: 328 MGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
G P +Y ++I+ K A EL E+ E
Sbjct: 438 KGFPPCPAAYCSLINALGKAKRYEAANELFKELKE 472
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 133/305 (43%), Gaps = 19/305 (6%)
Query: 44 LQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGL-------VSFNATATIQDLCGKG 96
L P+ ++ L N+ + VGR+ E+ ++ G+ VS+N T K
Sbjct: 334 LTPDVVFLNNLMNILGK----VGRVEELTNVFSEMGMWRCTPTVVSYN-TVIKALFESKA 388
Query: 97 RMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYN 156
+ M ++ + TY+ LI +C V+KA +L EM ++GF P A Y
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 157 KLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVE 216
L+ A + R A + + + + + +Y +I G + +L A++ +M
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFG-KCGKLSEAVDLFNEMKN 507
Query: 217 KGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSK 276
+G P Y+ L+ + ++EA L R+M G ++ ++N F G +
Sbjct: 508 QGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRR 567
Query: 277 VFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVS 336
+ + IK + P VTYN L+ G FEEA ++R M + G DA++
Sbjct: 568 AIEMFETIKH------SGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 337 YSTVI 341
YS+++
Sbjct: 622 YSSIL 626
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
+ R Y +I F ++ +A + +EM ++G P V YN L+ + + EA +
Sbjct: 477 VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
LR M + G D++ +N I+ G + A+E + GI P TY+ L+
Sbjct: 537 LRKMEENGCRADINSHNIILN-GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
EA + REM G Y+S+++A V H D + F
Sbjct: 596 HAGMFEEAARMMREMKDKGFEYDAITYSSILDA------VGNVDHEKDDVSSF 642
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 30/281 (10%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M + G+ ++ Y LI +C V KA + ++ + P + TY ++ YC +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
++A + M R + PDV Y+ + L D L+ K +M ++P Y+
Sbjct: 651 PKQAYALFEDMKRRDVKPDVVTYSVL--------LNSDPELDMKREMEAFDVIPDVVYYT 702
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL------------MNAFCLEGEF- 274
+I C L + + LF++M R + YT L M AF ++ +
Sbjct: 703 IMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVF 762
Query: 275 ---------SKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
K+ L +A + F + P Y ALI C MG +EA I M
Sbjct: 763 YYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRM 822
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
E G+ PD V Y+ +I+ C+ G A +L+ EM EK I+
Sbjct: 823 IESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 131/333 (39%), Gaps = 65/333 (19%)
Query: 91 DLCGK-GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFS 149
D GK G++ M KG+A D YT+LI C Q + A+ ++ EM G +
Sbjct: 404 DALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKT 463
Query: 150 PSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALE 209
P + YN L +EA L++M +RG+ P +N +I G ELD A
Sbjct: 464 PDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIE-GLIDAGELDKAEA 522
Query: 210 F-----------KAKMVE----KGILPHA-------------DTYSWLIVSLCFERR-LS 240
F A MV+ G L HA Y L SLC E+ +S
Sbjct: 523 FYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYIS 582
Query: 241 EAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLV 300
+A DL M + G+ + Y L+ A+C +V ++ A + F + P L
Sbjct: 583 KAQDLLDRMWKLGVEPEKSMYGKLIGAWC------RVNNVRKAREFFEILVTKKIVPDLF 636
Query: 301 TYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV-------------------- 340
TY +I +C + ++A + M + PD V+YS +
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIP 696
Query: 341 --------ISRFCKIGEPGMAYELMVEMNEKEI 365
I+R+C + + Y L +M +EI
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYALFKDMKRREI 729
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 9/276 (3%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I + GR + R GL D TY ++ ++ ++ K+LS ++
Sbjct: 189 ISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISET 248
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGL---SPDVDIYNTIITWGGDQELELD 205
Y + C A +L+ + D + D+ I + G E+ ++
Sbjct: 249 RNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIE 308
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A M + GI P YS +I + +A D+F +ML+ +S++
Sbjct: 309 DAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSIL 368
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+C G FS+ + L + T S V YN +G+ EEA+ + R M
Sbjct: 369 QCYCQMGNFSEAYDLFKEFRE------TNISLDRVCYNVAFDALGKLGKVEEAIELFREM 422
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN 361
G++PD ++Y+T+I C G+ A++LM+EM+
Sbjct: 423 TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMD 458
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 44/270 (16%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRA--------- 161
K + D TYT +I+ +C E +AY + +M R P V TY+ L+ +
Sbjct: 629 KKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKRE 688
Query: 162 -------------------YCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
YC + +++ + + M R + PDV Y ++ +
Sbjct: 689 MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK----NKP 744
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
E + + E KA V+ P Y+ LI C L EA +F +M+ G+ YT
Sbjct: 745 ERNLSREMKAFDVK----PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYT 800
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+L+ C K+ +L +A F + P +V Y ALI G C G +A+ ++
Sbjct: 801 ALIACCC------KMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLV 854
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
+ M E G+ P S S V + K+ G+
Sbjct: 855 KEMLEKGIKPTKASLSAV--HYAKLKAKGL 882
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 120/313 (38%), Gaps = 40/313 (12%)
Query: 85 ATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI 144
++ +Q C G ++LD+ Y +V++A ++ EM
Sbjct: 364 VSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMT 423
Query: 145 DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT----IITWGGDQ 200
+G +P V Y L+ C + + +A ++ M G +PD+ IYN + T G Q
Sbjct: 424 GKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQ 483
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
E A E M +G+ P T++ +I L L +A + F E L +
Sbjct: 484 E-----AFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA-EAFYESLEHKSREND-- 535
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLP---------------DFVTR----------- 294
S++ FC G F ++ LP D++++
Sbjct: 536 -ASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKL 594
Query: 295 -FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
P Y LI C + +A + + PD +Y+ +I+ +C++ EP A
Sbjct: 595 GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQA 654
Query: 354 YELMVEMNEKEIR 366
Y L +M ++++
Sbjct: 655 YALFEDMKRRDVK 667
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 108/294 (36%), Gaps = 45/294 (15%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVL-SEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
+ L L R T+L+ + + + D+A + G +P + N L+ R
Sbjct: 140 QSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSD 199
Query: 170 EAAGILRVMADRGLSPDVDIYNTIIT--WGGDQELELDTALE------------FKAKMV 215
G + GL D Y ++ W D + EL+ L F +
Sbjct: 200 MVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFI 259
Query: 216 EKGIL------------PHADT------------YSWLIVSLCFERRLSEAFDLFREMLR 251
E L P D Y ++ LC+E R+ +A + +M +
Sbjct: 260 EGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEK 319
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCC 311
G+ Y+++ +EG K ++ A+ F R + V ++++ +C
Sbjct: 320 HGIDPDVYVYSAI-----IEGH-RKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQ 373
Query: 312 MGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
MG F EA + + E +S D V Y+ K+G+ A EL EM K I
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGI 427
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 17/291 (5%)
Query: 79 GLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYK 138
LV+FN + LC + M R D +TY+ L+ + + + KA +
Sbjct: 202 NLVAFNGL--LSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKARE 258
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-TWG 197
V EMID G P + TY+ +V C+ RV EA GI+R M P IY+ ++ T+G
Sbjct: 259 VFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYG 318
Query: 198 GDQELE--LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLS 255
+ LE +DT LE M G+ ++ LI + C R+ + + +EM G++
Sbjct: 319 TENRLEEAVDTFLE----MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 256 TGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRF 315
+ ++ GE + F + + + P TY +I C
Sbjct: 375 PNSKSCNIILRHLIERGEKDEAFDVFRKM-------IKVCEPDADTYTMVIKMFCEKKEM 427
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
E A + + M + G+ P ++S +I+ C+ A L+ EM E IR
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIR 478
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 10/252 (3%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
RK L+ T+ ++ + ++VD+A + M P++ +N L+ A C+ VR
Sbjct: 161 RKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVR 220
Query: 170 EAAGILRVMADRGLSPDVDIYNTIIT-WGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
+A + M DR +PD Y+ ++ WG +E L A E +M++ G P TYS
Sbjct: 221 KAQEVFENMRDR-FTPDSKTYSILLEGWG--KEPNLPKAREVFREMIDAGCHPDIVTYSI 277
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFL 288
++ LC R+ EA + R M Y+ L++ + E L +A+ FL
Sbjct: 278 MVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTEN------RLEEAVDTFL 331
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+ + +N+LI C R + +L+ M G++P++ S + ++ + G
Sbjct: 332 EMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 391
Query: 349 EPGMAYELMVEM 360
E A+++ +M
Sbjct: 392 EKDEAFDVFRKM 403
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D TYT +I MFC ++E++ A KV M +G PS+ T++ L+ CEE ++A +L
Sbjct: 410 DADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLL 469
Query: 176 RVMADRGLSP 185
M + G+ P
Sbjct: 470 EEMIEMGIRP 479
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
Query: 60 RTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
R E+ V E+ + + FN+ I C RM M KG+ + ++
Sbjct: 322 RLEEAVDTFLEMERSGMKADVAVFNSL--IGAFCKANRMKNVYRVLKEMKSKGVTPNSKS 379
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
++ + E D+A+ V +MI + P TY +++ +CE+ + A + + M
Sbjct: 380 CNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMR 438
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+G+ P + ++ +I G +E A +M+E GI P T+ L L E R
Sbjct: 439 KKGVFPSMHTFSVLIN-GLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 10/257 (3%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEM---IDRGFSPSVATYNKLVRAYCEEDR 167
K A D R YT+L+ + V ++L M DR P TY +V A+
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK-GILPHADTY 226
+ A +L MA G+ + YN ++ G ++L++D A + +M E GI P +Y
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLK-GYCKQLQIDRAEDLLREMTEDAGIEPDVVSY 526
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG 286
+ +I + A F EM G++ + +YT+LM AF + G+ + D +
Sbjct: 527 NIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN 586
Query: 287 FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
R L+ +N L+ G+C +G E+A ++ M E G P+ +Y ++ + +
Sbjct: 587 -----DPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ 641
Query: 347 IGEPGMAYELMVEMNEK 363
+PG A L E+ E+
Sbjct: 642 ARKPGDALLLWKEIKER 658
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 85/227 (37%), Gaps = 38/227 (16%)
Query: 59 ARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQR 118
A T + + +R ++ + V++ T + G M M R G+ ++
Sbjct: 431 ADTARMLEAMRRQDDRNSHPDEVTY--TTVVSAFVNAGLMDRARQVLAEMARMGVPANRI 488
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMI-DRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
TY L+ +C Q ++D+A +L EM D G P V +YN ++ D A
Sbjct: 489 TYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNE 548
Query: 178 MADRGLSPDVDIYNTII---TWGGDQELE------------------------------- 203
M RG++P Y T++ G +L
Sbjct: 549 MRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLG 608
Query: 204 -LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
++ A ++M E G P+ TY L + R+ +A L++E+
Sbjct: 609 LIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEI 655
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 13/278 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRG-FSPSVATYNKLVRAYCEED 166
+N+ G+A + TY + + + + A + ID +PS+AT+ LV+ D
Sbjct: 156 INQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSND 215
Query: 167 RVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK--GILPHAD 224
+ +A I MA +G D +Y+ ++ G + + D L+ ++ EK G +
Sbjct: 216 NLEKAMEIKEDMAVKGFVVDPVVYSYLM-MGCVKNSDADGVLKLYQELKEKLGGFVDDGV 274
Query: 225 TYSWLIVSLCFERRLSEAFDLFREML--RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD 282
Y L+ + EA + + E + + AY ++ A G+F + L D
Sbjct: 275 VYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFD 334
Query: 283 AIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
A+K + + +L T+N ++ G+C G+FEEA+ + R M + SPD +S++ +++
Sbjct: 335 AVKK-EHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMN 393
Query: 343 RFCKIGEPGMAYELMVEMNEKEIR------GVLMKSCI 374
+ C A +L EM EK ++ G+LM +C
Sbjct: 394 QLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCF 431
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 12/176 (6%)
Query: 79 GLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYK 138
L +FN + C G+ M + D ++ +L++ C E + +A K
Sbjct: 349 NLGTFNVM--VNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEK 406
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN----TII 194
+ EM ++ P TY L+ +E ++ E A + M + L P++ +YN +I
Sbjct: 407 LYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLI 466
Query: 195 TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREML 250
G +LD A F MV K + + Y +++ +L RL E + EML
Sbjct: 467 KAG-----KLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEML 516
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 15/251 (5%)
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
+ +Y +++H ++ V +M++ GF+P V TYN ++ A + +L
Sbjct: 222 KHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLD 281
Query: 177 VMADRGLSPDVDIYNTIITW--GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
M G SPD+ YN ++ G++ L AL M E G+ P ++ LI L
Sbjct: 282 EMVKDGFSPDLYTYNILLHHLATGNKPL---AALNLLNHMREVGVEPGVIHFTTLIDGLS 338
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFV 292
+L E ++ G + YT ++ + GE K + + KG LP+
Sbjct: 339 RAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN-- 396
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
+ TYN++I G C G+F+EA +L+ M G +P+ V YST+++ G+
Sbjct: 397 ------VFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLE 450
Query: 353 AYELMVEMNEK 363
A+E++ +M EK
Sbjct: 451 AHEVVKDMVEK 461
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 65 VGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLI 124
+ +REV + G++ F T I L G++ + G D YT +I
Sbjct: 315 LNHMREVGV---EPGVIHF--TTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMI 369
Query: 125 HMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLS 184
+ E++KA ++ EM ++G P+V TYN ++R +C + +EA +L+ M RG +
Sbjct: 370 TGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN 429
Query: 185 PDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPH 222
P+ +Y+T++ + L+ A E MVEKG H
Sbjct: 430 PNFVVYSTLVNNLKNAGKVLE-AHEVVKDMVEKGHYVH 466
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 110/262 (41%), Gaps = 14/262 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQE--EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEE 165
M GL T+ LI + C ++ V++A + EMI GF P + CE
Sbjct: 739 MKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEV 798
Query: 166 DRVREAAGILRVMADRGLSPDV--DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHA 223
++A L + G V IY + G E L F+ E+ +L
Sbjct: 799 GNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEG---ERSLLDQY 855
Query: 224 DTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA 283
TY ++ L L +A D M G G YTSL+ F E + KV
Sbjct: 856 -TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQK 914
Query: 284 IKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
++G PS+VTY A+I G+ +G+ EEA R M E G SPD +YS I+
Sbjct: 915 MEG------ESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 344 FCKIGEPGMAYELMVEMNEKEI 365
C+ + A +L+ EM +K I
Sbjct: 969 LCQACKSEDALKLLSEMLDKGI 990
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 16/289 (5%)
Query: 63 KDVGRIREVAEKTNQKGLVSFNATA---TIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
K +G+ V EK + G +ATA I+ LC GR M KG+ RT
Sbjct: 238 KKIGKGLLVFEKMRKSGF-ELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRT 296
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y L+ E+VD + +M+ + L++++C +++EA ++R +
Sbjct: 297 YKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELK 356
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
++ + D Y I+ G + + ALE ++++ L ++ Y +I + +
Sbjct: 357 NKEMCLDAK-YFEILVKGLCRANRMVDALEI-VDIMKRRKLDDSNVYGIIISGYLRQNDV 414
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSP 297
S+A + F + + G YT +M +F K +L + + G PD V
Sbjct: 415 SKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA---- 470
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
A++ GH R EA + M E G+ P SYS + C+
Sbjct: 471 ----ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCR 515
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 113/287 (39%), Gaps = 29/287 (10%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M + G D RT+T LI ++ +++ K V +M GF YN ++R+ C R
Sbjct: 215 MEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGR 274
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
A + M ++G++ + Y ++ E ++D MV + D +
Sbjct: 275 GDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSE-KVDVVQSIADDMVRICEISEHDAFG 333
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK-- 285
+L+ S C ++ EA +L RE+ + + L+ C + D +K
Sbjct: 334 YLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRR 393
Query: 286 -------------GFL-----PDFVTRFS--------PSLVTYNALIYGHCCMGRFEEAL 319
G+L + +F P + TY ++ + +FE+
Sbjct: 394 KLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGC 453
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ M E G+ PD+V+ + V++ A+++ M EK I+
Sbjct: 454 NLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIK 500
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 7/215 (3%)
Query: 64 DVGRIREVAEKTNQKGLVSFNATAT----IQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
+VG ++ + G + F T I+ LC G++ + LDQ T
Sbjct: 797 EVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYT 856
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y S++H + ++ KA ++ M + G P V Y L+ + +E ++ + + M
Sbjct: 857 YGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKME 916
Query: 180 DRGLSPDVDIYNTIITWGGDQEL-ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
P V Y +I G L +++ A M E+G P TYS I LC +
Sbjct: 917 GESCEPSVVTYTAMIC--GYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACK 974
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
+A L EML G++ + ++ EG+
Sbjct: 975 SEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 3/197 (1%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
++ LC RM M R+ L D Y +I + Q +V KA + + G
Sbjct: 371 VKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGR 429
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P V+TY ++++ + + + + M + G+ PD + T + G + + A
Sbjct: 430 PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPD-SVAITAVVAGHLGQNRVAEAW 488
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+ + M EKGI P +YS + LC R E +F +M + + ++ ++++
Sbjct: 489 KVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSM 548
Query: 269 CLEGEFSKVFHLHDAIK 285
GE K+ HL I+
Sbjct: 549 EKNGEKEKI-HLIKEIQ 564
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TYT++I + +V++A+ M +RG SP TY+K + C+ + +A +L M
Sbjct: 926 TYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM 985
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELD---TALEFKAKMV 215
D+G++P + T+ +G ++E + D AL+ K+ +V
Sbjct: 986 LDKGIAPSTINFRTVF-YGLNREGKHDLARIALQKKSALV 1024
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 10/288 (3%)
Query: 76 NQKGL--VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEV 133
NQKG + N A I+ L + M K L L + T+ + + +V
Sbjct: 120 NQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKV 178
Query: 134 DKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI 193
+A +M + GF + +N+++ + V +A + M + PD+ Y TI
Sbjct: 179 KEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSY-TI 237
Query: 194 ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
+ G QEL L E +M ++G P Y +I + C ++ EA F EM +
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN 297
Query: 254 LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMG 313
+ SL+N E + L+DA++ F + F TYNAL+ +C
Sbjct: 298 CKPSPHIFCSLINGLGSEKK------LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQ 351
Query: 314 RFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN 361
R E+A + M G+ P+A +Y ++ ++ AYE+ M+
Sbjct: 352 RMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS 399
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 10/259 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +K D ++YT L+ + + + + +V EM D GF P V Y ++ A+C+ +
Sbjct: 223 MKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKK 282
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
EA M R P I+ ++I G E +L+ ALEF + G A TY+
Sbjct: 283 YEEAIRFFNEMEQRNCKPSPHIFCSLIN-GLGSEKKLNDALEFFERSKSSGFPLEAPTYN 341
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L+ + C+ +R+ +A+ EM G+ Y +++ + + ++ +
Sbjct: 342 ALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSC- 400
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P++ TY ++ C R + A+ I M G+ P +S++I+ C
Sbjct: 401 --------EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHE 452
Query: 348 GEPGMAYELMVEMNEKEIR 366
+ A E EM + IR
Sbjct: 453 NKLDEACEYFNEMLDVGIR 471
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 13/262 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G ++ + ++ V A KV +M + F P + +Y L+ + +E
Sbjct: 188 MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 247
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ + R M D G PDV Y II + + + A+ F +M ++ P +
Sbjct: 248 LLRVDEVNREMKDEGFEPDVVAYGIIIN-AHCKAKKYEEAIRFFNEMEQRNCKPSPHIFC 306
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI L E++L++A + F G P Y +L+ A+C + D ++
Sbjct: 307 SLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR-- 364
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
+ P+ TY+ +++ M R +EA + + M+ P +Y ++ FC
Sbjct: 365 ----LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCNK 417
Query: 348 GEPGMAYELMVEMNEKEIRGVL 369
MA ++ EM K GVL
Sbjct: 418 ERLDMAIKIWDEMKGK---GVL 436
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G L+ TY +L+ +C + ++ AYK + EM +G P+ TY+ ++ R +EA
Sbjct: 332 GFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEA 391
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+ + M+ P V Y ++ ++E LD A++ +M KG+LP +S LI
Sbjct: 392 YEVYQTMS---CEPTVSTYEIMVRMFCNKE-RLDMAIKIWDEMKGKGVLPGMHMFSSLIT 447
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL 280
+LC E +L EA + F EML G+ ++ L EG KV L
Sbjct: 448 ALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDL 496
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 9/261 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M RKGL D+RTY L++ +C ++ +A + L EM RGF+P + L+
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ A ++ M G PD+ +N +I + E++ +E + G+ DTY
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIE-AISKSGEVEFCIEMYYTACKLGLCVDIDTYK 326
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI ++ ++ EAF L + G Y ++ C G F F +K
Sbjct: 327 TLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMK-- 384
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
V P+ Y LI G+F +A L M EMGL P + + V
Sbjct: 385 ----VKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNG 440
Query: 348 GEPGMAYELMVEMNEKEIRGV 368
G+ +A + +E E ++RGV
Sbjct: 441 GKHDLA--MRIEQLEVQLRGV 459
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 17/249 (6%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
Y SL+H C + AY ++ MI +G P TY LV +C +++EA L M
Sbjct: 184 VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM 243
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+ RG +P + +I G L++A E +KM + G +P T++ LI ++
Sbjct: 244 SRRGFNPPARGRDLLIE-GLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL-----HDAIKGFLPDFVT 293
+ +++ + GL Y +L+ A G+ + F L D K F
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPF------ 356
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
PSL Y +I G C G F++A M P+ Y+ +I+ + G+ A
Sbjct: 357 ---PSL--YAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDA 411
Query: 354 YELMVEMNE 362
+VEM E
Sbjct: 412 ANYLVEMTE 420
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 104/258 (40%), Gaps = 14/258 (5%)
Query: 111 KGLALD--QRTYTSLIHMFCHQEEVDKAYKVLSEMIDR-GFSPSVATYNKLVRAYCEEDR 167
K L+LD T +I + VD+A ++ + + G +V YN L+ A C+
Sbjct: 138 KDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKM 197
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
A ++R M +GL PD Y I+ G ++ A EF +M +G P A
Sbjct: 198 FHGAYALIRRMIRKGLKPDKRTY-AILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRD 256
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL-HDAIK- 285
LI L L A ++ +M +GG + L+ A GE + + A K
Sbjct: 257 LLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKL 316
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
G D + TY LI +G+ +EA +L E G P Y+ +I C
Sbjct: 317 GLCVD--------IDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMC 368
Query: 346 KIGEPGMAYELMVEMNEK 363
+ G A+ +M K
Sbjct: 369 RNGMFDDAFSFFSDMKVK 386
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 14/215 (6%)
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTA 207
++P+ Y +L ++ + IL+ M D L + II G + +D A
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYG-KNGHVDQA 165
Query: 208 LE-FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMN 266
+E F G D Y+ L+ +LC + A+ L R M+R GL + Y L+N
Sbjct: 166 VELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVN 225
Query: 267 AFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+C G+ + + FL + R F+P + LI G G E A ++ M
Sbjct: 226 GWCSAGKMKEA-------QEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKM 278
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
+ G PD +++ +I K GE E +EM
Sbjct: 279 TKGGFVPDIQTFNILIEAISKSGE----VEFCIEM 309
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 116/252 (46%), Gaps = 7/252 (2%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TYT L++ +C + +A ++ ++MID+G P + +N ++ + +A + VM
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+G P+V Y TI+ ++ ++TA+E+ MV+ G+ P A Y+ LI +++
Sbjct: 360 KSKGPCPNVRSY-TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
L ++L +EM G Y +L+ + +++ + PS
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKM------IQNEIEPS 472
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
+ T+N ++ + +E + M + G+ PD SY+ +I G+ A +
Sbjct: 473 IHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLE 532
Query: 359 EMNEKEIRGVLM 370
EM +K ++ L+
Sbjct: 533 EMLDKGMKTPLI 544
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 9/254 (3%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
R+G A D RTY S++ + + + VL EM +G ++ T+ ++A+ +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
+A GI +M V+ N ++ G +L + + F K+ E+ P+ TY+ L
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD-KLKER-FTPNMMTYTVL 304
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
+ C R L EA ++ +M+ GL A+ ++ + S L +K P
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
P++ +Y +I C E A+ M + GL PDA Y+ +I+ F +
Sbjct: 365 ------CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 350 PGMAYELMVEMNEK 363
YEL+ EM EK
Sbjct: 419 LDTVYELLKEMQEK 432
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M KG + R+YT +I FC Q ++ A + +M+D G P A Y L+ + + +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +L+ M ++G PD YN +I +Q++ + A KM++ I P T++
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP-EHATRIYNKMIQNEIEPSIHTFN 477
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
++ S R ++ EM++ G+ + +YT L+ EG+
Sbjct: 478 MIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGK 523
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I+D C + M M GL D YT LI F Q+++D Y++L EM +
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-TWGGDQELEL 204
+G P TYN L++ + A I M + P + +N I+ ++ + E+
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEM 491
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
A+ +M++KGI P ++Y+ LI L E + EA EML G+ T Y
Sbjct: 492 GRAV--WEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Query: 265 MNAFCLEGE 273
F G+
Sbjct: 550 AADFHRGGQ 558
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 123/260 (47%), Gaps = 14/260 (5%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
+G + + + + E+D+ +KV EM G+ +V T+N ++ ++C+E ++ E
Sbjct: 177 EGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFE 236
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAK---MVEKGILPHADTYS 227
A + M G+ P+V +N +I G + ++ AL+ K M + P+A TY+
Sbjct: 237 ALSVFYRMLKCGVWPNVVSFNMMID-GACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYN 295
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--K 285
+I C RL A + +M++ G+ E Y +L++A+ G + L D + K
Sbjct: 296 SVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSK 355
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
G + + V YN+++Y G E A+ +LR M + D + + V+ C
Sbjct: 356 GLVVN--------TVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLC 407
Query: 346 KIGEPGMAYELMVEMNEKEI 365
+ G A E +++EK++
Sbjct: 408 RNGYVKEAVEFQRQISEKKL 427
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 134/301 (44%), Gaps = 17/301 (5%)
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
V++N+ I C GR+ M + G+ ++RTY +L+ + D+A ++
Sbjct: 292 VTYNSV--INGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLC 349
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
EM +G + YN +V E + A +LR M + + D I+ G +
Sbjct: 350 DEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQID-RFTQAIVVRGLCR 408
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
+ A+EF+ ++ EK ++ ++ L+ +++L+ A + ML GLS +
Sbjct: 409 NGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
+ +L++ + EG+ + ++D + + +LV YN+++ G G A
Sbjct: 469 FGTLIDGYLKEGKLERALEIYDGM------IKMNKTSNLVIYNSIVNGLSKRGMAGAAEA 522
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN----EKEIRGVLMKSCINH 376
++ M D V+Y+T+++ K G A +++ +M EK + V INH
Sbjct: 523 VVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINH 578
Query: 377 L 377
L
Sbjct: 579 L 579
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 32/268 (11%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M KGL ++ Y S+++ + +++ A VL +M + T +VR C
Sbjct: 352 MTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGY 411
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V+EA R ++++ L D+ +NT++ ++ +L A + M+ +G+ A ++
Sbjct: 412 VKEAVEFQRQISEKKLVEDIVCHNTLMHHFV-RDKKLACADQILGSMLVQGLSLDAISFG 470
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI E +L A +++ M++ ++ Y S++N G + +A++
Sbjct: 471 TLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME-- 528
Query: 288 LPDFVT-----------------------------RFSPSLVTYNALIYGHCCMGRFEEA 318
+ D VT S SLVT+N +I C G +E+A
Sbjct: 529 IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKA 588
Query: 319 LGILRGMAEMGLSPDAVSYSTVISRFCK 346
+L+ M E G+ PD+++Y T+I+ F K
Sbjct: 589 KEVLKFMVERGVVPDSITYGTLITSFSK 616
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 12/257 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M+ G + T+ +I+ FC + ++ +A V M+ G P+V ++N ++ C+
Sbjct: 209 MDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGD 268
Query: 168 VREA---AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHAD 224
+R A G + +M+ +SP+ YN++I G + LD A + MV+ G+ +
Sbjct: 269 MRFALQLLGKMGMMSGNFVSPNAVTYNSVIN-GFCKAGRLDLAERIRGDMVKSGVDCNER 327
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFH-LHDA 283
TY L+ + EA L EM GL Y S++ +EG+ L D
Sbjct: 328 TYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM 387
Query: 284 IKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
+ + RF+ ++V + G C G +EA+ R ++E L D V ++T++
Sbjct: 388 NSKNMQ--IDRFTQAIV-----VRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHH 440
Query: 344 FCKIGEPGMAYELMVEM 360
F + + A +++ M
Sbjct: 441 FVRDKKLACADQILGSM 457
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 124/283 (43%), Gaps = 31/283 (10%)
Query: 110 RKG-LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
+KG + D +Y +I + EV++ KVL EM++ GF P +Y+ L+ R+
Sbjct: 247 KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRI 306
Query: 169 REAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
++ I + +G PD ++YN +I + D ++ + +M+++ P+ +TYS
Sbjct: 307 NDSVEIFDNIKHKGNVPDANVYNAMIC-NFISARDFDESMRYYRRMLDEECEPNLETYSK 365
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF---------- 278
L+ L R++S+A ++F EML G+ TS + C G
Sbjct: 366 LVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAG 425
Query: 279 -HLHDAIKGFLPDFVTRFS-----------------PSLV-TYNALIYGHCCMGRFEEAL 319
+ ++ L ++RF PS V Y ++ G C +G E A+
Sbjct: 426 CRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAV 485
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
++ G P+ YS + S+ + +AY+L +++ +
Sbjct: 486 LVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKK 528
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 14/246 (5%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
+G+ D T + F V +A ++ E G S ++N L+R CE V
Sbjct: 180 EGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSA 239
Query: 171 AAGILRVMADRGLSP-DVDIYNTIIT-WGGDQELE-LDTALEFKAKMVEKGILPHADTYS 227
A + A +G P D YN +I+ W E+E ++ L+ +MVE G P +YS
Sbjct: 240 AKSVFN--AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLK---EMVESGFGPDCLSYS 294
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI L R++++ ++F + G Y +++ F +F ++++ +
Sbjct: 295 HLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD------ESMRYY 348
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P+L TY+ L+ G + +AL I M G+ P ++ + C
Sbjct: 349 RRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSY 408
Query: 348 GEPGMA 353
G P A
Sbjct: 409 GPPHAA 414
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 115/252 (45%), Gaps = 7/252 (2%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TYT L++ +C + +A ++ ++MID G P + +N ++ + +A + VM
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+G P+V Y TI+ ++ ++TA+E+ MV+ G+ P A Y+ LI +++
Sbjct: 359 KSKGPCPNVRSY-TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 417
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
L ++L +EM G Y +L+ + +++ + PS
Sbjct: 418 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM------IQNEIEPS 471
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
+ T+N ++ + +E + M + G+ PD SY+ +I G+ A +
Sbjct: 472 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLE 531
Query: 359 EMNEKEIRGVLM 370
EM +K ++ L+
Sbjct: 532 EMLDKGMKTPLI 543
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 9/254 (3%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
R+G A D RTY S++ + + + VL EM +G ++ T+ ++A+ +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 245
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
+A GI +M V+ N ++ G +L + + F K+ E+ P+ TY+ L
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD-KLKER-FTPNMMTYTVL 303
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
+ C R L EA ++ +M+ GL A+ ++ + S L +K P
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 363
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
P++ +Y +I C E A+ M + GL PDA Y+ +I+ F +
Sbjct: 364 ------CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 417
Query: 350 PGMAYELMVEMNEK 363
YEL+ EM EK
Sbjct: 418 LDTVYELLKEMQEK 431
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M KG + R+YT +I FC Q ++ A + +M+D G P A Y L+ + + +
Sbjct: 358 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 417
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +L+ M ++G PD YN +I +Q++ + KM++ I P T++
Sbjct: 418 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP-EHGTRIYNKMIQNEIEPSIHTFN 476
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
++ S R ++ EM++ G+ + +YT L+ EG+
Sbjct: 477 MIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 522
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 3/189 (1%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I+D C + M M GL D YT LI F Q+++D Y++L EM +
Sbjct: 371 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 430
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-TWGGDQELEL 204
+G P TYN L++ + I M + P + +N I+ ++ + E+
Sbjct: 431 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 490
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
A+ +M++KGI P ++Y+ LI L E + EA EML G+ T Y
Sbjct: 491 GRAV--WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 548
Query: 265 MNAFCLEGE 273
F G+
Sbjct: 549 AADFHRGGQ 557
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 25/321 (7%)
Query: 62 EKDVGRIREVAEKTNQKG--LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
+K G I + + Q G L S A I G M M GL T
Sbjct: 93 QKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTST 152
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRG---FSPSVATYNKLVRAYCEEDRVREAAGILR 176
Y +LI + + +++ ++L M++ G P++ T+N LV+A+C++ +V EA +++
Sbjct: 153 YNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVK 212
Query: 177 VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK-GILPHADTYSWLIVSLCF 235
M + G+ PD YNTI T + + E KMV K P+ T ++ C
Sbjct: 213 KMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC---------------LEGEFSKVFHL 280
E R+ + R M + + SL+N F L F++ L
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVEL 332
Query: 281 HDAIKGFLPDFV----TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVS 336
K + ++TY+ ++ G E+A + + M + G+ PDA +
Sbjct: 333 VGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 392
Query: 337 YSTVISRFCKIGEPGMAYELM 357
YS + + + EP A EL+
Sbjct: 393 YSILAKGYVRAKEPKKAEELL 413
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 127/304 (41%), Gaps = 68/304 (22%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKL----------VRA------ 161
RT+ L+ +C +++V++A++V+ +M + G P TYN + VRA
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 162 ---------------------YCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT----- 195
YC E RVR+ +R M + + ++ ++N++I
Sbjct: 249 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV 308
Query: 196 ---------------WGGDQELELDTALEFKAK----MVEKGILPHADTYSWLIVSLCFE 236
++E+EL + K + M E + TYS ++ +
Sbjct: 309 MDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSA 368
Query: 237 RRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS 296
+ +A +F+EM++ G+ AY+ L + E K L L +
Sbjct: 369 GYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL-------LETLIVESR 421
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P++V + +I G C G ++A+ + M + G+SP+ ++ T++ + ++ +P A E+
Sbjct: 422 PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 481
Query: 357 MVEM 360
+ M
Sbjct: 482 LQMM 485
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 214 MVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
+ E G P +Y+ L+ ++ +++ + E+ + G + +++NAF G
Sbjct: 71 LAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESG- 129
Query: 274 FSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG---L 330
++ DA++ L +P+ TYN LI G+ G+ E + +L M E G +
Sbjct: 130 -----NMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDV 184
Query: 331 SPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
P+ +++ ++ +CK + A+E++ +M E +R
Sbjct: 185 GPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 115/252 (45%), Gaps = 7/252 (2%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TYT L++ +C + +A ++ ++MID G P + +N ++ + +A + VM
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+G P+V Y TI+ ++ ++TA+E+ MV+ G+ P A Y+ LI +++
Sbjct: 360 KSKGPCPNVRSY-TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
L ++L +EM G Y +L+ + +++ + PS
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM------IQNEIEPS 472
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
+ T+N ++ + +E + M + G+ PD SY+ +I G+ A +
Sbjct: 473 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLE 532
Query: 359 EMNEKEIRGVLM 370
EM +K ++ L+
Sbjct: 533 EMLDKGMKTPLI 544
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 9/254 (3%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
R+G A RTY S++ + + + VL EM +G ++ T+ ++A+ +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
+A GI +M V+ N ++ G +L + + F K+ E+ P+ TY+ L
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD-KLKER-FTPNMMTYTVL 304
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
+ C R L EA ++ +M+ GL A+ ++ + S L +K P
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 364
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
P++ +Y +I C E A+ M + GL PDA Y+ +I+ F +
Sbjct: 365 ------CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 350 PGMAYELMVEMNEK 363
YEL+ EM EK
Sbjct: 419 LDTVYELLKEMQEK 432
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M KG + R+YT +I FC Q ++ A + +M+D G P A Y L+ + + +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +L+ M ++G PD YN +I +Q++ + KM++ I P T++
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP-EHGTRIYNKMIQNEIEPSIHTFN 477
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
++ S R ++ EM++ G+ + +YT L+ EG+
Sbjct: 478 MIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGK 523
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 3/189 (1%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T I+D C + M M GL D YT LI F Q+++D Y++L EM +
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII-TWGGDQELEL 204
+G P TYN L++ + I M + P + +N I+ ++ + E+
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 491
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
A+ +M++KGI P ++Y+ LI L E + EA EML G+ T Y
Sbjct: 492 GRAV--WDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Query: 265 MNAFCLEGE 273
F G+
Sbjct: 550 AADFHRGGQ 558
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 144/350 (41%), Gaps = 29/350 (8%)
Query: 18 LRVKTILRNRLLPLKV----IIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAE 73
L V+ L R +P V +I G+ AG L+ VS R++E
Sbjct: 392 LLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS--------------RMKEDEI 437
Query: 74 KTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEV 133
K N +V+ N + +C + M ++G+ + TY +LIH C V
Sbjct: 438 KPN---VVTVNTI--VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 134 DKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI 193
+KA +M++ G SP Y L+ C+ R +A ++ + + G S D+ YN +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 194 ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
I D+ + E M ++G P + TY+ LI + + +M G
Sbjct: 553 IGLFCDKN-NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 254 LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMG 313
L Y ++++A+C GE + L + ++ +P+ V YN LI +G
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDM-----GLHSKVNPNTVIYNILINAFSKLG 666
Query: 314 RFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
F +AL + M + P+ +Y+ + + + +LM EM E+
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 14/241 (5%)
Query: 134 DKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI 193
+K ++S G SP+ + + + C+ R A IL + + +N +
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL 300
Query: 194 ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
++ G + +++ + KM E I P T LI +LC RR+ EA ++F +M RG
Sbjct: 301 LSCLG-RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM-RGK 358
Query: 254 -------LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALI 306
+ + +L++ C G + L +K R P+ VTYN LI
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK-----LEERCVPNAVTYNCLI 413
Query: 307 YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
G+C G+ E A ++ M E + P+ V+ +T++ C+ MA ++M ++ ++
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 367 G 367
G
Sbjct: 474 G 474
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 19/235 (8%)
Query: 51 VSGLWNLKARTEKDVGRIREVAEKTNQKG----LVSFNATATIQDLCGKGRMXXXXXXXX 106
+SGL ++ +D IR V EK + G L+++N + C K
Sbjct: 518 ISGLCQVR----RDHDAIR-VVEKLKEGGFSLDLLAYNMLIGL--FCDKNNAEKVYEMLT 570
Query: 107 XMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEED 166
M ++G D TY +LI F ++ + +++ +M + G P+V TY ++ AYC
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 167 RVREAAGILRVMADRGL----SPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPH 222
+ EA L++ D GL +P+ IYN +I + AL K +M K + P+
Sbjct: 631 ELDEA---LKLFKDMGLHSKVNPNTVIYNILIN-AFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 223 ADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKV 277
+TY+ L L + + L EM+ + LM E K+
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 124/291 (42%), Gaps = 16/291 (5%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
S N ++ I LC GR G D+RT +I + V+
Sbjct: 90 SLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIH 149
Query: 142 EMI--DRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
+I + F PS+ YN+L+ C RV +A ++ M +RG PDV + T+I GG
Sbjct: 150 RLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLI--GGY 207
Query: 200 QEL-ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREML-----RGG 253
E+ EL+ A + +M GI P++ T S LI R + L +E+
Sbjct: 208 CEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETD 267
Query: 254 LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMG 313
S A+ +L+++ C EG F+ +F + + + F+ Y +I C
Sbjct: 268 TSMKAAAFANLVDSMCREGYFNDIFEIAENM-SLCESVNVEFA-----YGHMIDSLCRYR 321
Query: 314 RFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKE 364
R A I+ M GL P SY+ +I CK G AY+L+ E +E E
Sbjct: 322 RNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFE 372
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 141/353 (39%), Gaps = 30/353 (8%)
Query: 24 LRNRLLPLKVIIPGFAAAGNLQPESNKVSGLWN-LKARTEKDV----------------- 65
+R L L V+I GF +++ + LW +K T+ +
Sbjct: 228 IRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGY 287
Query: 66 -GRIREVAEKTN--QKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTS 122
I E+AE + + V F I LC R M KGL + +Y +
Sbjct: 288 FNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNA 347
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
+IH C +AY++L E + F PS TY L+ + C+E +A +L +M +
Sbjct: 348 IIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKE 407
Query: 183 LSPDVDIYNTIIT--WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLS 240
+ IYN + D E+ L M++ P T + +I LC R+
Sbjct: 408 GADRTRIYNIYLRGLCVMDNPTEI---LNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVD 464
Query: 241 EAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLV 300
+A + +M+ G P +L C + D + +P+ + P +V
Sbjct: 465 DAMKVLDDMMTGKFCA--PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE--NKIKPGVV 520
Query: 301 TYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
YNA+I G + + +EA+ + + + ++ D+ +Y+ +I C + MA
Sbjct: 521 AYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMA 573
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 11/225 (4%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF-SPSVATYNKLVRAYCEEDRVREAAGI 174
D+ T ++I+ C VD A KVL +M+ F +P T N ++ + R EA +
Sbjct: 446 DEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV 505
Query: 175 L-RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSL 233
L RVM + + P V YN +I G + + D A+ ++ + + + TY+ +I L
Sbjct: 506 LNRVMPENKIKPGVVAYNAVIR-GLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 234 CFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVT 293
C ++ A + +++ Y + + C G S H FL D
Sbjct: 565 CVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACH-------FLYDLAD 617
Query: 294 RFS-PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSY 337
+ P++V YN +I G EA IL M + G +PDAV++
Sbjct: 618 SGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW 662
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 106/264 (40%), Gaps = 21/264 (7%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M RK A R Y + C + + VL M+ P T N ++ C+ R
Sbjct: 403 MLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGR 462
Query: 168 VREAAGILR-VMADRGLSPDVDIYNTI---ITWGGDQELELDTALEFKAKMVEKGILPHA 223
V +A +L +M + +PD NT+ + G E LD M E I P
Sbjct: 463 VDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV---LNRVMPENKIKPGV 519
Query: 224 DTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA 283
Y+ +I L + EA +F ++ + ++ Y +++ C+ + D
Sbjct: 520 VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV-------DM 572
Query: 284 IKGFLPDFVTRFSPS----LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYST 339
K F D + PS Y A + G C G +A L +A+ G P+ V Y+T
Sbjct: 573 AKKFWDDVIW---PSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNT 629
Query: 340 VISRFCKIGEPGMAYELMVEMNEK 363
VI+ + G AY+++ EM +
Sbjct: 630 VIAECSRSGLKREAYQILEEMRKN 653
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 12/251 (4%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
Y L++ C V A+K++ +M +RG P V T+ L+ YCE + A + M
Sbjct: 164 NYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEM 223
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKM-----VEKGILPHADTYSWLIVSL 233
G+ P+ + +++ G + +++T + ++ E A ++ L+ S+
Sbjct: 224 RVCGIRPN-SLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSM 282
Query: 234 CFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVT 293
C E ++ F++ M E AY ++++ C + H A +
Sbjct: 283 CREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLC------RYRRNHGAARIVYIMKSK 336
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
P +YNA+I+G C G A +L +E P +Y ++ CK + G A
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA 396
Query: 354 YELMVEMNEKE 364
++ M KE
Sbjct: 397 RNVLELMLRKE 407
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 4/162 (2%)
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
D AL + +G P + S +I SLC R EA F L G E +
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRG 324
+ + + GF +FV PSL YN L+ C + R +A ++
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFV----PSLTNYNRLMNQLCTIYRVIDAHKLVFD 187
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
M G PD V+++T+I +C+I E +A+++ EM IR
Sbjct: 188 MRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIR 229
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 143/349 (40%), Gaps = 29/349 (8%)
Query: 18 LRVKTILRNRLLPLKV----IIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAE 73
L V+ L R +P V +I G+ AG L+ VS R++E
Sbjct: 392 LLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS--------------RMKEDEI 437
Query: 74 KTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEV 133
K N +V+ N + +C + M ++G+ + TY +LIH C V
Sbjct: 438 KPN---VVTVNTI--VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 134 DKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI 193
+KA +M++ G SP Y L+ C+ R +A ++ + + G S D+ YN +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 194 ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
I D+ + E M ++G P + TY+ LI + + +M G
Sbjct: 553 IGLFCDKN-NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 254 LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMG 313
L Y ++++A+C GE + L + ++ +P+ V YN LI +G
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDM-----GLHSKVNPNTVIYNILINAFSKLG 666
Query: 314 RFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
F +AL + M + P+ +Y+ + + + +LM EM E
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 15/256 (5%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEM----IDRG--FSPSVATYNKLVRAYCEEDRVR 169
D T LI+ C VD+A +V +M D G +N L+ C+ R++
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 170 EAAGIL-RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
EA +L R+ + P+ YN +I G + +L+TA E ++M E I P+ T +
Sbjct: 388 EAEELLVRMKLEERCVPNAVTYNCLID-GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFL 288
++ +C L+ A F +M + G+ Y +L++A C K + ++ +
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM---- 502
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
SP Y ALI G C + R +A+ ++ + E G S D ++Y+ +I FC
Sbjct: 503 --LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKN 560
Query: 349 EPGMAYELMVEMNEKE 364
YE++ +M EKE
Sbjct: 561 NAEKVYEMLTDM-EKE 575
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 14/241 (5%)
Query: 134 DKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI 193
+K ++S G SP+ + + + C+ R A IL + + +N +
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL 300
Query: 194 ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
++ G + +++ + KM E I P T LI +LC RR+ EA ++F +M RG
Sbjct: 301 LSCLG-RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQM-RGK 358
Query: 254 -------LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALI 306
+ + +L++ C G + L +K R P+ VTYN LI
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK-----LEERCVPNAVTYNCLI 413
Query: 307 YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
G+C G+ E A ++ M E + P+ V+ +T++ C+ MA ++M ++ ++
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 367 G 367
G
Sbjct: 474 G 474
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 8/242 (3%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY SLI C +++ KA +L +MI + P+ T+ L++ C + EA ++ M
Sbjct: 223 TYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDM 282
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
RG P + Y +++ G + +D A +M ++ I P Y+ L+ LC E R
Sbjct: 283 EYRGCKPGLVNYGILMSDLGKRG-RIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECR 341
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
+ EA+ + EM G Y +++ FC +F ++ +A+ +R P+
Sbjct: 342 VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAM------LASRHCPT 395
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
T+ ++ G G + A +L M + LS + ++ ++S C I + G+ E +
Sbjct: 396 PATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC-IKDGGVYCEALS 454
Query: 359 EM 360
E+
Sbjct: 455 EV 456
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 7/230 (3%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
++ +LI++ E++KA D P+ ++N L++ + ++ A +
Sbjct: 152 QSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDE 211
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M + + P V YN++I + + ++ A M++K I P+A T+ L+ LC +
Sbjct: 212 MLEMEVQPSVVTYNSLIGFLCRND-DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKG 270
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
+EA L +M G G Y LM+ G + L +K R P
Sbjct: 271 EYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKK------RRIKP 324
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
+V YN L+ C R EA +L M G P+A +Y +I FC+I
Sbjct: 325 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRI 374
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 9/245 (3%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
+ LI + VDKA V ++ ++ + N L+ + + +A
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
D L P+ +N +I G + + + A + +M+E + P TY+ LI LC +
Sbjct: 179 DMRLRPNSVSFNILIK-GFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPS 298
+A L +M++ + + LM C +GE+++ K + D R P
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEA-------KKLMFDMEYRGCKPG 290
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
LV Y L+ GR +EA +L M + + PD V Y+ +++ C AY ++
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLT 350
Query: 359 EMNEK 363
EM K
Sbjct: 351 EMQMK 355
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 11/269 (4%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G D +Y+SLI+ D ++L + R + + L++ Y + V +A
Sbjct: 76 GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKA 135
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+ + + NT+I D EL+ A F + + P++ +++ LI
Sbjct: 136 IDVFHKITSFDCVRTIQSLNTLINVLVDNG-ELEKAKSFFDGAKDMRLRPNSVSFNILIK 194
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
+ A +F EML + Y SL+ C + K K L D
Sbjct: 195 GFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA-------KSLLEDM 247
Query: 292 VT-RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
+ R P+ VT+ L+ G CC G + EA ++ M G P V+Y ++S K G
Sbjct: 248 IKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRI 307
Query: 351 GMAYELMVEMNEKEIRG--VLMKSCINHL 377
A L+ EM ++ I+ V+ +NHL
Sbjct: 308 DEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 7/247 (2%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
++ LI F + + + A KV EM++ PSV TYN L+ C D + +A +L M
Sbjct: 188 SFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDM 247
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+ + P+ + ++ G + E + A + M +G P Y L+ L R
Sbjct: 248 IKKRIRPNAVTFGLLMK-GLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGR 306
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
+ EA L EM + + Y L+N C E + + + ++ + P+
Sbjct: 307 IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ------MKGCKPN 360
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
TY +I G C + F+ L +L M P ++ +++ K G A ++
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Query: 359 EMNEKEI 365
M +K +
Sbjct: 421 VMGKKNL 427
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 4/230 (1%)
Query: 44 LQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNAT--ATIQDLCGKGRMXXX 101
+QP + L R + D+G+ + + E +K + T ++ LC KG
Sbjct: 217 VQPSVVTYNSLIGFLCRND-DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEA 275
Query: 102 XXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRA 161
M +G Y L+ + +D+A +L EM R P V YN LV
Sbjct: 276 KKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNH 335
Query: 162 YCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILP 221
C E RV EA +L M +G P+ Y +I G + + D+ L M+ P
Sbjct: 336 LCTECRVPEAYRVLTEMQMKGCKPNAATYRMMID-GFCRIEDFDSGLNVLNAMLASRHCP 394
Query: 222 HADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
T+ ++ L L A + M + LS G A+ +L++ C++
Sbjct: 395 TPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIK 444
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 143/350 (40%), Gaps = 29/350 (8%)
Query: 18 LRVKTILRNRLLPLKV----IIPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAE 73
L V+ L R P V +I G+ AG L+ VS R++E
Sbjct: 392 LLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS--------------RMKEDEI 437
Query: 74 KTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEV 133
K N +V+ N + +C + M ++G+ + TY +LIH C V
Sbjct: 438 KPN---VVTVNTI--VGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 134 DKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI 193
+KA +M++ G SP Y L+ C+ R +A ++ + + G S D+ YN +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNML 552
Query: 194 ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
I D+ + E M ++G P + TY+ LI + + +M G
Sbjct: 553 IGLFCDKN-NTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 254 LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMG 313
L Y ++++A+C GE + L + ++ +P+ V YN LI +G
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDM-----GLHSKVNPNTVIYNILINAFSKLG 666
Query: 314 RFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
F +AL + M + P+ +Y+ + + + +LM EM E+
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 14/241 (5%)
Query: 134 DKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI 193
+K ++S G SP+ + + + C+ R A IL + + +N +
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNAL 300
Query: 194 ITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
++ G + +++ + KM E I P T LI +LC RR+ EA ++F +M RG
Sbjct: 301 LSCLG-RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM-RGK 358
Query: 254 -------LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALI 306
+ + +L++ C G + L +K R +P+ VTYN LI
Sbjct: 359 RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK-----LEERCAPNAVTYNCLI 413
Query: 307 YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
G+C G+ E A ++ M E + P+ V+ +T++ C+ MA ++M ++ ++
Sbjct: 414 DGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK 473
Query: 367 G 367
G
Sbjct: 474 G 474
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 19/235 (8%)
Query: 51 VSGLWNLKARTEKDVGRIREVAEKTNQKG----LVSFNATATIQDLCGKGRMXXXXXXXX 106
+SGL ++ +D IR V EK + G L+++N + C K
Sbjct: 518 ISGLCQVR----RDHDAIR-VVEKLKEGGFSLDLLAYNMLIGL--FCDKNNTEKVYEMLT 570
Query: 107 XMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEED 166
M ++G D TY +LI F ++ + +++ +M + G P+V TY ++ AYC
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 167 RVREAAGILRVMADRGL----SPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPH 222
+ EA L++ D GL +P+ IYN +I + AL K +M K + P+
Sbjct: 631 ELDEA---LKLFKDMGLHSKVNPNTVIYNILIN-AFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 223 ADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKV 277
+TY+ L L + + L EM+ + LM E K+
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 37/287 (12%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M ++ D+ TYT +I + D+A + +EMI G + +V YN L++ +
Sbjct: 261 MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKM 320
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITW--GGDQELELDTALEFKAKMVEKGI------ 219
V +A + M + G P+ Y+ ++ Q + LD +E + + +GI
Sbjct: 321 VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVR 380
Query: 220 ----LPHA-------------------DTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
L H D+Y ++ SLC + EA ++ ++ G+ T
Sbjct: 381 TLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVT 440
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE 316
Y ++ +A G+ ++ H+HD + D SP + TYN LI +G +
Sbjct: 441 DTMMYNTVFSAL---GKLKQISHIHDLFEKMKKDGP---SPDIFTYNILIASFGRVGEVD 494
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
EA+ I + PD +SY+++I+ K G+ A+ EM EK
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 43/258 (16%)
Query: 87 ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR 146
+ ++ LCG G+ ++ KG+ D Y ++ +++ + + +M
Sbjct: 412 SMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
Query: 147 GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDT 206
G SP + TYN L+ ++ V EA I + PD+ YN++I G +
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 207 ALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMN 266
+ FK +M EKG+ P TYS L+ R+ A+ LF EML G
Sbjct: 532 HVRFK-EMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQ----------- 579
Query: 267 AFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMA 326
P++VTYN L+ GR EA+ + M
Sbjct: 580 ------------------------------PNIVTYNILLDCLEKNGRTAEAVDLYSKMK 609
Query: 327 EMGLSPDAVSYSTVISRF 344
+ GL+PD+++Y TV+ R
Sbjct: 610 QQGLTPDSITY-TVLERL 626
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 170/397 (42%), Gaps = 51/397 (12%)
Query: 1 MECVEEWKLNTNKVTMMLRVKTILRNRLLPLKVIIPGFAAAGNLQPESNKVSGLWNLKAR 60
+ V++W L N T ++ LR+R + G + + + L + A+
Sbjct: 191 LRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK 250
Query: 61 TEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTY 120
EK ++ ++ ++ + T I+ + G+ M +GL L+ Y
Sbjct: 251 DEKACQVFEDMKKRHCRRD--EYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGY 308
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
+L+ + + VDKA +V S M++ G P+ TY+ L+ E ++ G++ + +
Sbjct: 309 NTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEI-SK 367
Query: 181 RGLSPDVDIYNTII------------------TWGGDQELELDT---------------- 206
R ++ IY+ ++ W + E D+
Sbjct: 368 RYMTQG--IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIE 425
Query: 207 ALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMN 266
A+E +K+ EKG++ Y+ + +L +++S DLF +M + G S Y L+
Sbjct: 426 AIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 267 AFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR---FEEALGILR 323
+F GE + ++ + ++ + P +++YN+LI C+G+ +EA +
Sbjct: 486 SFGRVGEVDEAINIFEELER------SDCKPDIISYNSLIN---CLGKNGDVDEAHVRFK 536
Query: 324 GMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
M E GL+PD V+YST++ F K MAY L EM
Sbjct: 537 EMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 17/227 (7%)
Query: 54 LWNLKARTEKD-----------VGRIREVAE---KTNQKGLVSFNAT-ATIQDLCGK-GR 97
+W+ + E+D G+ E E K ++KG+V+ T+ GK +
Sbjct: 398 MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQ 457
Query: 98 MXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNK 157
+ M + G + D TY LI F EVD+A + E+ P + +YN
Sbjct: 458 ISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNS 517
Query: 158 LVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK 217
L+ + V EA + M ++GL+PDV Y+T++ G E ++ A +M+ K
Sbjct: 518 LINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTE-RVEMAYSLFEEMLVK 576
Query: 218 GILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
G P+ TY+ L+ L R +EA DL+ +M + GL+ YT L
Sbjct: 577 GCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 7/249 (2%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
+ Q Y+ L+ V +A+++ +M +Y ++ + C + EA +
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
L + ++G+ D +YNT+ + G + ++ + KM + G P TY+ LI S
Sbjct: 430 LSKIHEKGVVTDTMMYNTVFSALGKLK-QISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
+ EA ++F E+ R +Y SL+N CL G+ V H K
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLIN--CL-GKNGDVDEAHVRFKEMQE---KG 542
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
+P +VTY+ L+ R E A + M G P+ V+Y+ ++ K G A
Sbjct: 543 LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAV 602
Query: 355 ELMVEMNEK 363
+L +M ++
Sbjct: 603 DLYSKMKQQ 611
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 4/245 (1%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDR-GFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
T+ S++ F + E + ++ EM + G SP+V +YN L+ AYC + EA +
Sbjct: 247 TFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEE 306
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M RG+ D+ YNT+I G E+ A E M KGI TY L+ C
Sbjct: 307 MKVRGVVYDIVAYNTMI-GGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAG 365
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
+ ++REM R G +L+ C + + +V D +K + + + F P
Sbjct: 366 DVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAM--FYP 423
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
S Y L+ C G+ + AL I M G P +Y I + +G+ + L
Sbjct: 424 SRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLA 483
Query: 358 VEMNE 362
+EM E
Sbjct: 484 IEMAE 488
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 36/260 (13%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
LI +E+D A V+ ++ RG + ++T N L I V RG
Sbjct: 168 LIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNAL---------------ITEVSRRRG 212
Query: 183 LSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEA 242
S +Y + +G D D +++ KM+ K I P+A T++ ++VS E
Sbjct: 213 ASNGYKMYREV--FGLD-----DVSVDEAKKMIGK-IKPNATTFNSMMVSFYREGETEMV 264
Query: 243 FDLFREMLRG-GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDFVTRFSPSL 299
++REM G S +Y LM A+C G S+ + + +K G + D +
Sbjct: 265 ERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYD--------I 316
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
V YN +I G C +A + R M G+ ++Y +++ +CK G+ + E
Sbjct: 317 VAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYRE 376
Query: 360 MNEK--EIRGVLMKSCINHL 377
M K E G+ +++ + L
Sbjct: 377 MKRKGFEADGLTIEALVEGL 396
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 79/194 (40%), Gaps = 3/194 (1%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
++ ++ C +G M M +G+ D Y ++I C EV KA ++ +
Sbjct: 282 YSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRD 341
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITW---GGD 199
M +G + TY LV YC+ V + R M +G D ++ D
Sbjct: 342 MGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD 401
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+ ++ A K + E P + Y L+ LC + ++ A ++ EM+ G +
Sbjct: 402 GQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQE 461
Query: 260 AYTSLMNAFCLEGE 273
Y + ++ + + G+
Sbjct: 462 TYRAFIDGYGIVGD 475
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 10/254 (3%)
Query: 91 DLCGK-GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI--DRG 147
D C + G++ + K + D+ + +LI VD+A+ VL+EM
Sbjct: 545 DGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHP 604
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTA 207
P + L++A C +V A + +++ G+ ++Y TI + + D A
Sbjct: 605 IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVY-TIAVNSCSKSGDWDFA 663
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
M EK + P +S LI + L EAF + ++ G+ G +Y+SLM A
Sbjct: 664 CSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGA 723
Query: 268 FCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAE 327
C ++ K L++ IK + P++ T NALI C + +A+ L +
Sbjct: 724 CCNAKDWKKALELYEKIKSI------KLRPTISTMNALITALCEGNQLPKAMEYLDEIKT 777
Query: 328 MGLSPDAVSYSTVI 341
+GL P+ ++YS ++
Sbjct: 778 LGLKPNTITYSMLM 791
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 121/266 (45%), Gaps = 13/266 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
+ G+ D + YT+LI +VD ++V +M + G ++ T+ L+ +
Sbjct: 493 VQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ 552
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKG--ILPHADT 225
V +A G ++ + + PD ++N +I+ G Q +D A + A+M + I P +
Sbjct: 553 VAKAFGAYGILRSKNVKPDRVVFNALISACG-QSGAVDRAFDVLAEMKAETHPIDPDHIS 611
Query: 226 YSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK 285
L+ + C ++ A ++++ + + G+ YT +N+ G++ ++ +K
Sbjct: 612 IGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMK 671
Query: 286 GFLPDFVTRFSPSLVTYNALI--YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
+P V ++ALI GH M +EA GIL+ G+ +SYS+++
Sbjct: 672 E------KDVTPDEVFFSALIDVAGHAKM--LDEAFGILQDAKSQGIRLGTISYSSLMGA 723
Query: 344 FCKIGEPGMAYELMVEMNEKEIRGVL 369
C + A EL ++ ++R +
Sbjct: 724 CCNAKDWKKALELYEKIKSIKLRPTI 749
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 113/257 (43%), Gaps = 9/257 (3%)
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
R L +D+ + S Q V +A++ +++I +P+++T+N L+ +
Sbjct: 428 QRDLLDMDKIYHASFFKACKKQRAVKEAFR-FTKLI---LNPTMSTFNMLMSVCASSQDI 483
Query: 169 REAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
A G+LR++ + G++ D +Y T+I+ + ++D E +M G+ + T+
Sbjct: 484 EGARGVLRLVQESGMTADCKLYTTLISSCA-KSGKVDAMFEVFHQMSNSGVEANLHTFGA 542
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFL 288
LI ++++AF + + + + +L++A G + F + +K
Sbjct: 543 LIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKA-- 600
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
P ++ AL+ C G+ E A + + + + G+ Y+ ++ K G
Sbjct: 601 --ETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSG 658
Query: 349 EPGMAYELMVEMNEKEI 365
+ A + +M EK++
Sbjct: 659 DWDFACSIYKDMKEKDV 675
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 11/275 (4%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
+ LC K + G+ +TY+ L+ + + A KV EM++R
Sbjct: 180 LHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNC 239
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
+ YN L+ A C+ V + + M + GL PD + I D ++ +A
Sbjct: 240 VVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAG-DVHSAY 298
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+ +M ++P+ T++ +I +LC ++ +A+ L EM++ G + Y S+M
Sbjct: 299 KVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYH 358
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
C E ++ L + T+ P TYN ++ +GRF+ A I GM+E
Sbjct: 359 CDHCEVNRATKLLSRMDR------TKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSER 412
Query: 329 GLSPDAVSYSTVISRFC----KIGEPGMAYELMVE 359
P +Y+ +I K+ E +E+M++
Sbjct: 413 KFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMID 447
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 116/281 (41%), Gaps = 45/281 (16%)
Query: 70 EVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCH 129
E+ E+ L+++NA + LC G + M GL D ++ IH +C
Sbjct: 233 EMLERNCVVDLLAYNAL--LDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCD 290
Query: 130 QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDI 189
+V AYKVL M P+V T+N +++ C+ ++V +A +L M +G +PD
Sbjct: 291 AGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT 350
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
YN+I+ + D E++ A + ++M LP TY+ ++ L R A +++
Sbjct: 351 YNSIMAYHCDH-CEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWE-- 407
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
G+S +F P++ TY +I+G
Sbjct: 408 ---GMSE------------------------------------RKFYPTVATYTVMIHGL 428
Query: 310 C-CMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
G+ EEA M + G+ P + + + +R G+
Sbjct: 429 VRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQ 469
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 3/191 (1%)
Query: 38 FAAAGNLQPESNKVSGLWNLKARTEK-DVGRIREVAEKTNQKGLVS--FNATATIQDLCG 94
F GNL + + S + A + DV +V ++ + LV + I+ LC
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCK 325
Query: 95 KGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVAT 154
++ M +KG D TY S++ C EV++A K+LS M P T
Sbjct: 326 NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHT 385
Query: 155 YNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKM 214
YN +++ R A I M++R P V Y +I ++ +L+ A + M
Sbjct: 386 YNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 445
Query: 215 VEKGILPHADT 225
+++GI P++ T
Sbjct: 446 IDEGIPPYSTT 456
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 213 KMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG 272
+MVE GI P D L+ SLC ++ ++ A + F + G+ Y+ L+ +
Sbjct: 163 RMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGW---- 218
Query: 273 EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSP 332
+++ A K F L+ YNAL+ C G + + + M +GL P
Sbjct: 219 --ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 333 DAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
DA S++ I +C G+ AY+++ M ++
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDL 309
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 105/235 (44%), Gaps = 6/235 (2%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D RT+ LIH FC + D A ++ M F+P V TY V AYC+E R +L
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEML 331
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
M + G +P+V Y TI+ + ++ AL KM E G +P A YS LI L
Sbjct: 332 EEMRENGCNPNVVTY-TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
R +A ++F +M G+ Y ++++A L +K +
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRL---LKRMEDEEGESC 447
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGI-LRGMAEMGLSPDAVSYSTVISRFCKIGE 349
SP++ TY L+ C + + LGI L M + +S D +Y +I C G+
Sbjct: 448 SPNVETYAPLLKMC-CHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGK 501
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 11/261 (4%)
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVA--TYNKLVRAYCEED 166
++ G TY +++ + D +++++EM S V T +K++R +
Sbjct: 158 SQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSG 217
Query: 167 RVREAA-GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADT 225
+ +A L + G+ D N+++ +E ++ A E K+ + I P A T
Sbjct: 218 KYNKAVDAFLEMEKSYGVKTDTIAMNSLMD-ALVKENSIEHAHEVFLKLFD-TIKPDART 275
Query: 226 YSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK 285
++ LI C R+ +A + M + YTS + A+C EG+F +V + + ++
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR 335
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
+P++VTY +++ + EALG+ M E G PDA YS++I
Sbjct: 336 E------NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389
Query: 346 KIGEPGMAYELMVEMNEKEIR 366
K G A E+ +M + +R
Sbjct: 390 KTGRFKDAAEIFEDMTNQGVR 410
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 115/295 (38%), Gaps = 49/295 (16%)
Query: 74 KTNQKGLVSFNATATI-QDLCGKGRMXXXXXXXXXMNRK-GLALDQRTYTSLIHMFCHQE 131
K + LV+ + + + + L G+ M + G+ D SL+ +
Sbjct: 194 KNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKEN 253
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
++ A++V ++ D P T+N L+ +C+ + +A ++ +M +PDV
Sbjct: 254 SIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVV--- 309
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
TY+ + + C E ++ EM
Sbjct: 310 ---------------------------------TYTSFVEAYCKEGDFRRVNEMLEEMRE 336
Query: 252 GGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDFVTRFSPSLVTYNALIYGH 309
G + YT +M++ + ++ +++ +K G +PD +F Y++LI+
Sbjct: 337 NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPD--AKF------YSSLIHIL 388
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKE 364
GRF++A I M G+ D + Y+T+IS MA L+ M ++E
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 6/198 (3%)
Query: 62 EKDVGRIREVAEKTNQKGLVSFNATATI--QDLCGKGRMXXXXXXXXXMNRKGLALDQRT 119
E D R+ E+ E+ + G T TI L ++ M G D +
Sbjct: 321 EGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKF 380
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y+SLIH+ A ++ +M ++G V YN ++ A R A +L+ M
Sbjct: 381 YSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRME 440
Query: 180 D---RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
D SP+V+ Y ++ ++ + MV+ + TY LI LC
Sbjct: 441 DEEGESCSPNVETYAPLLKMCCHKKKMKLLGI-LLHHMVKNDVSIDVSTYILLIRGLCMS 499
Query: 237 RRLSEAFDLFREMLRGGL 254
++ EA F E +R G+
Sbjct: 500 GKVEEACLFFEEAVRKGM 517
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 132/282 (46%), Gaps = 42/282 (14%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G++ R S++ ++ E+D A K M +R V +N ++ AYC+ + EA
Sbjct: 211 GMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEA 266
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQEL-ELDTALEFKAKMVEKGILPHADTYSWLI 230
+++ M G+SP + +N +I GG +L + D A++ KM GI T++ +I
Sbjct: 267 VELVKEMEKEGISPGLVTWNILI--GGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF----CLE--GEFSKVFHLHDAI 284
L +A D+FR+M G+ P ++M+A CL+ + S+V + A+
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVV---PNAVTIMSAVSACSCLKVINQGSEVHSI--AV 379
Query: 285 K-GFLPD-----------------------FVTRFSPSLVTYNALIYGHCCMGRFEEALG 320
K GF+ D F + + + T+N++I G+C G +A
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYE 439
Query: 321 ILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
+ M + L P+ ++++T+IS + K G+ G A +L M +
Sbjct: 440 LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 16/229 (6%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D T+ S+I +C KAY++ + M D P++ T+N ++ Y + EA +
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 176 RVMADRG-LSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
+ M G + + +N II G Q + D ALE KM +P++ T L+ +
Sbjct: 477 QRMEKDGKVQRNTATWNLIIA-GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA 535
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG--EFSKVFHLHDAIKGFLPDFV 292
++ +LR L +L + + G E+S+ F+
Sbjct: 536 NLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTI------------FL 583
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
+ ++T+N+LI G+ G + AL + M G++P+ + S++I
Sbjct: 584 GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 108/257 (42%), Gaps = 50/257 (19%)
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
T L+ M+ + A KV M +R ++ T++ ++ AY E+R RE A + R+M
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 181 RGLSPD-----------------------------------VDIYNTIITWGGDQELELD 205
G+ PD + + N+I+ ELD
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG-ELD 233
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A +F +M E+ ++ ++ ++++ C + EA +L +EM + G+S G + L+
Sbjct: 234 FATKFFRRMRERDVI----AWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ G+ L ++ F + + T+ A+I G G +AL + R M
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETF------GITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 326 AEMGLSPDAVSYSTVIS 342
G+ P+AV+ + +S
Sbjct: 344 FLAGVVPNAVTIMSAVS 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 31/259 (11%)
Query: 127 FCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD 186
C + +A K L + +G +TY KL+ + C + IL PD
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLES-CIDSGSIHLGRILHARFGLFTEPD 114
Query: 187 VDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLF 246
V + +++ D F + M E+ + T+S +I + E R E LF
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDS-MRERNLF----TWSAMIGAYSRENRWREVAKLF 169
Query: 247 REMLRGGLSTGEPAYTSLMN--AFCLEGEFSKVFH-------------LHDAIKGFLP-- 289
R M++ G+ + + ++ A C + E KV H + ++I
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 290 ---DFVTRF-----SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
DF T+F ++ +N+++ +C G+ EEA+ +++ M + G+SP V+++ +I
Sbjct: 230 GELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 342 SRFCKIGEPGMAYELMVEM 360
+ ++G+ A +LM +M
Sbjct: 290 GGYNQLGKCDAAMDLMQKM 308
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 142/362 (39%), Gaps = 67/362 (18%)
Query: 71 VAEKTNQKGLVSFNAT-ATIQDLCGK-GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFC 128
V E +KG++ T T+ D GK G+ M G + TY +++ +
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 129 HQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVD 188
+ ++ K+L +M G SP+ AT+N ++ + + + R M G PD D
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 189 IYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFRE 248
+NT+I+ G E+D A + +M G TY+ L+ +L + ++ +
Sbjct: 493 TFNTLISAYGRCGSEVD-ASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 249 MLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK----------------------- 285
M G E +Y+ ++ + G + + + + IK
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 286 --------------GFLPDFV---------TR------------------FSPSLVTYNA 304
G+ PD V TR SP LVTYN+
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 305 LIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKE 364
L+ + G +A IL+ + + L PD VSY+TVI FC+ G A ++ EM E+
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 365 IR 366
IR
Sbjct: 732 IR 733
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 8/255 (3%)
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
N L LD + + + + + A K+L ++ + + V Y ++ AY +
Sbjct: 167 NSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKY 226
Query: 169 REAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
+A + M + G SP + YN I+ G L +M KG+ T S
Sbjct: 227 EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCST 286
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFL 288
++ + E L EA + F E+ G G Y +L+ F G +++ + L
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSV-------L 339
Query: 289 PDFVTRFSPS-LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
+ P+ VTYN L+ + G +EA G++ M + G+ P+A++Y+TVI + K
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 348 GEPGMAYELMVEMNE 362
G+ A +L M E
Sbjct: 400 GKEDEALKLFYSMKE 414
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 34/261 (13%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY +L+ +F +A VL EM + TYN+LV AY +EAAG++ +M
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMM 377
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+G+ P+ Y T+I G E D AL+ M E G +P+ TY+ ++ L + R
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKE-DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFC----LEGEFSKVFHLHDAIKGFLPDF--- 291
+E + +M G S + +++ A C ++ ++VF + GF PD
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSC-GFEPDRDTF 494
Query: 292 ----------------------VTR--FSPSLVTYNALIYGHCCMGRFEEALGILRGMAE 327
+TR F+ + TYNAL+ G + ++ M
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 328 MGLSPDAVSYSTVISRFCKIG 348
G P SYS ++ + K G
Sbjct: 555 KGFKPTETSYSLMLQCYAKGG 575
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 1/182 (0%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
+ G D + S++ +F D+A +L + + G SP + TYN L+ Y
Sbjct: 624 KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECW 683
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
+A IL+ + L PD+ YNT+I + L + A+ ++M E+GI P TY+
Sbjct: 684 KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL-MQEAVRMLSEMTERGIRPCIFTYNTF 742
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
+ +E D+ M + E + +++ +C G++S+ IK F P
Sbjct: 743 VSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDP 802
Query: 290 DF 291
F
Sbjct: 803 CF 804
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 121/289 (41%), Gaps = 44/289 (15%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCE--- 164
M R G TY +L++ + + V+S+M +GF P+ +Y+ +++ Y +
Sbjct: 517 MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Query: 165 -------EDRVREA----------------------AGILR---VMADRGLSPDVDIYNT 192
E+R++E AG R + G PD+ I+N+
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
+++ + D A + E G+ P TY+ L+ +A ++ + + +
Sbjct: 637 MLSIFTRNNM-YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCC 311
L +Y +++ FC G + +A++ L + R P + TYN + G+
Sbjct: 696 QLKPDLVSYNTVIKGFCRRG------LMQEAVR-MLSEMTERGIRPCIFTYNTFVSGYTA 748
Query: 312 MGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
MG F E ++ MA+ P+ +++ V+ +C+ G+ A + + ++
Sbjct: 749 MGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY S+I FC Q+ VD A ++L M +G SP V T++ L+ YC+ RV I M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
RG+ + Y T+I G Q +LD A + +M+ G+ P T+ ++ LC ++
Sbjct: 72 HRRGIVANTVTYTTLI-HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 239 LSEAFDLFREMLRG 252
L +AF + ++ +
Sbjct: 131 LRKAFAILEDLQKS 144
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 150 PSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALE 209
P+ TYN ++ +C++DRV +A +L MA +G SPDV ++T+I G + +D +E
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLIN-GYCKAKRVDNGME 66
Query: 210 FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC 269
+M +GI+ + TY+ LI C L A DL EM+ G++ + ++ C
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 270 LEGEFSKVF 278
+ E K F
Sbjct: 127 SKKELRKAF 135
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 214 MVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
M+ I P TY+ +I C + R+ +A + M G S +++L+N +C
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC---- 56
Query: 274 FSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPD 333
K + + ++ F + VTY LI+G C +G + A +L M G++PD
Sbjct: 57 --KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 114
Query: 334 AVSYSTVISRFCKIGEPGMAYELMVEMNEKE 364
+++ +++ C E A+ ++ ++ + E
Sbjct: 115 YITFHCMLAGLCSKKELRKAFAILEDLQKSE 145
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
+ +A K +V+F + I C R+ M+R+G+ + TYT+LIH F
Sbjct: 33 LDSMASKGCSPDVVTF--STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 90
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
C ++D A +L+EMI G +P T++ ++ C + +R+A IL
Sbjct: 91 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAIL 138
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P+ +TYN++I G C R ++A +L MA G SPD V++ST+I+ +CK E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 357 MVEMNEKEI 365
EM+ + I
Sbjct: 68 FCEMHRRGI 76
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
+++N+ I C + R+ M KG + D T+++LI+ +C + VD ++
Sbjct: 11 ITYNSM--IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
EM RG + TY L+ +C+ + A +L M G++PD ++ ++
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 118/279 (42%), Gaps = 8/279 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T ++ C G + M G+ + TY+ +I C ++ +A+ V ++M+D
Sbjct: 259 TNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD 318
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G +P+ T+N L+R + + R + + M G PD YN +I E L+
Sbjct: 319 SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDE-NLE 377
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A++ M++K +A T++ + + +R ++ A ++ +M+ Y LM
Sbjct: 378 NAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
F V + + P++ TY L+ C MG + A + + M
Sbjct: 438 RMFVGSKSTDMVLKMKKEMDD------KEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM 491
Query: 326 AEMG-LSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
E L+P Y V+++ + G+ EL+ +M +K
Sbjct: 492 VEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQK 530
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 8/227 (3%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y +I + + D A+ ++ M R S+ T+ L+R Y EA M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
D G PD ++ +I+ + + F + ++ P Y+ L+ C +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS--LKDRFEPDVIVYTNLVRGWCRAGEI 271
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
SEA +F+EM G+ Y+ +++A C G+ S+ HD L + +P+
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRA---HDVFADMLD---SGCAPNA 325
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+T+N L+ H GR E+ L + M ++G PD ++Y+ +I C+
Sbjct: 326 ITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 13/252 (5%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D YT+L+ +C E+ +A KV EM G P+V TY+ ++ A C ++ A +
Sbjct: 254 DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVF 313
Query: 176 RVMADRGLSPDVDIYNTII---TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
M D G +P+ +N ++ G E L+ +M + G P TY++LI +
Sbjct: 314 ADMLDSGCAPNAITFNNLMRVHVKAGRTE----KVLQVYNQMKKLGCEPDTITYNFLIEA 369
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
C + L A + M++ + ++ K ++ A + +
Sbjct: 370 HCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRY------IEKKRDVNGAHRMYSKMME 423
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
+ P+ VTYN L+ + L + + M + + P+ +Y +++ FC +G
Sbjct: 424 AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNN 483
Query: 353 AYELMVEMNEKE 364
AY+L EM E++
Sbjct: 484 AYKLFKEMVEEK 495
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 97/255 (38%), Gaps = 43/255 (16%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G D+ ++ +I + +A + DR F P V Y LVR +C
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGE 270
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ EA + + M G+ P+V TYS
Sbjct: 271 ISEAEKVFKEMKLAGIEPNV------------------------------------YTYS 294
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
+I +LC ++S A D+F +ML G + + +LM G KV +++ +K
Sbjct: 295 IVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 354
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P +TYN LI HC E A+ +L M + +A +++T+ K
Sbjct: 355 ------GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKK 408
Query: 348 GEPGMAYELMVEMNE 362
+ A+ + +M E
Sbjct: 409 RDVNGAHRMYSKMME 423
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 104/248 (41%), Gaps = 6/248 (2%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
+ + I LC G++ M G A + T+ +L+ + +K +V ++
Sbjct: 291 YTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQ 350
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M G P TYN L+ A+C ++ + A +L M + + +NTI + +++
Sbjct: 351 MKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRY-IEKKR 409
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+++ A +KM+E P+ TY+ L+ + + +EM + Y
Sbjct: 410 DVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYR 469
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
L+ FC G ++ + L K + + +PSL Y ++ G+ ++ ++
Sbjct: 470 LLVTMFCGMGHWNNAYKL---FKEMVEEKC--LTPSLSLYEMVLAQLRRAGQLKKHEELV 524
Query: 323 RGMAEMGL 330
M + GL
Sbjct: 525 EKMIQKGL 532
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 8/171 (4%)
Query: 190 YNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREM 249
YN +I G + D A M + + +T++ LI SEA F M
Sbjct: 154 YNEMIDLSGKVR-QFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
G + A++ +++ + S+ D++K RF P ++ Y L+ G
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD-------RFEPDVIVYTNLVRGW 265
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
C G EA + + M G+ P+ +YS VI C+ G+ A+++ +M
Sbjct: 266 CRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM 316
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 11/227 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ D +Y+S+I + ++K K+ M P YN +V A +
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 168 VREAAGILRVM-ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTY 226
V EA +++ M ++G+ P+V YN++I + + + A + +M+EKG+ P TY
Sbjct: 353 VSEARNLMKTMEEEKGIEPNVVTYNSLIK-PLCKARKTEEAKQVFDEMLEKGLFPTIRTY 411
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG 286
+ L R E F+L +M + G Y L+ C +F V L D +K
Sbjct: 412 HAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKE 468
Query: 287 FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPD 333
P L +Y +I+G G+ EEA G + M + G+ P+
Sbjct: 469 ------KTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 10/259 (3%)
Query: 109 NRKGLALDQRTYTSLIHMFCHQ-EEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
N+ D +++ +++ +C+ +A +V EM + G V +Y+ ++ Y +
Sbjct: 258 NKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGS 317
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ + + M + PD +YN ++ + K EKGI P+ TY+
Sbjct: 318 LNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYN 377
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI LC R+ EA +F EML GL Y + M GE +VF L ++
Sbjct: 378 SLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE--EVFELLAKMRKM 434
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
+ P++ TY LI C F+ L + M E + PD SY +I
Sbjct: 435 GCE------PTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLN 488
Query: 348 GEPGMAYELMVEMNEKEIR 366
G+ AY EM +K +R
Sbjct: 489 GKIEEAYGYYKEMKDKGMR 507
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
KG+ + TY SLI C + ++A +V EM+++G P++ TY+ +R + V E
Sbjct: 367 KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFE 426
Query: 171 AAGILRVMADRGLSPDVDIYNTII----TWGGDQELELDTALEFKAKMVEKGILPHADTY 226
+R M G P V+ Y +I W + D L +M EK + P +Y
Sbjct: 427 LLAKMRKM---GCEPTVETYIMLIRKLCRWR-----DFDNVLLLWDEMKEKTVGPDLSSY 478
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+I L ++ EA+ ++EM G+ E + + F
Sbjct: 479 IVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWF 520
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 153 ATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKA 212
A YN ++ C+ + EA I + GL PDV YN +I + L A + A
Sbjct: 15 AGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFS-----SLGRAEKLYA 69
Query: 213 KMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG 272
+M+ +G++P TY+ +I LC + +L++A + S + +L+N +C
Sbjct: 70 EMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYC--- 117
Query: 273 EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSP 332
K + D + F + +++TY LI+G +G F AL I + M G+
Sbjct: 118 ---KATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYS 174
Query: 333 DAVSYSTVISRFCKIGEPGMAYELMVE 359
++++ ++ + C E A ++++
Sbjct: 175 SSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M + +D Y +IH C + D+A + + ++ G P V TYN ++R
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----SS 60
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ A + M RGL PD YN++I G ++ +L +A+ V K T++
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMI-HGLCKQNKLA-----QARKVSKS----CSTFN 110
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL 280
LI C R+ + +LF EM R G+ YT+L++ F G+F+ +
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDI 163
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 20/187 (10%)
Query: 174 ILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSL 233
+ +VM + + D YN II G + + D A ++ G+ P TY+ +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIII-HGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF- 58
Query: 234 CFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVT 293
L A L+ EM+R GL Y S+++ C + + ++
Sbjct: 59 ---SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------------R 100
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
+ S S T+N LI G+C R ++ + + M G+ + ++Y+T+I F ++G+ A
Sbjct: 101 KVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTA 160
Query: 354 YELMVEM 360
++ EM
Sbjct: 161 LDIFQEM 167
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 43/257 (16%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
R + D T+ L +C + KA K+L EMI+ G P TY + +C+ V
Sbjct: 261 RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVD 320
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
EAA D+++ +IT G P A T++ +
Sbjct: 321 EAA---------------DLFDFMITKGSAVS------------------APTAKTFALM 347
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGF 287
IV+L + E F+L M+ G Y ++ C+ + + + D + KG+
Sbjct: 348 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
PD +VTYN + C + +EAL + M E +P +Y+ +IS F ++
Sbjct: 408 PPD--------IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEM 459
Query: 348 GEPGMAYELMVEMNEKE 364
+P A+ EM++++
Sbjct: 460 DDPDGAFNTWTEMDKRD 476
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G D TY +I C E+VD+AYK L EM ++G+ P + TYN +R CE + EA
Sbjct: 371 GCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEA 430
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+ M + +P V YN +I+ + + + D A +M ++ + +TY +I
Sbjct: 431 LKLYGRMVESRCAPSVQTYNMLISMFFEMD-DPDGAFNTWTEMDKRDCVQDVETYCAMIN 489
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L R EA L E++ GL + S + G + + + +K F
Sbjct: 490 GLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKF 545
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 11/230 (4%)
Query: 44 LQPESNKVSGL---WNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXX 100
++P++N + L W +K + + E+ E ++ +F A I C G +
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPE--NFTYCAAIDTFCQAGMVDE 321
Query: 101 XXXXXXXMNRKGLALDQ---RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNK 157
M KG A+ +T+ +I ++ ++ ++++ MI G P V+TY
Sbjct: 322 AADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKD 381
Query: 158 LVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEK 217
++ C ++V EA L M+++G PD+ YN + + + D AL+ +MVE
Sbjct: 382 VIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENR-KTDEALKLYGRMVES 440
Query: 218 GILPHADTYSWLIVSLCFERRLSE-AFDLFREMLRGGLSTGEPAYTSLMN 266
P TY+ LI S+ FE + AF+ + EM + Y +++N
Sbjct: 441 RCAPSVQTYNMLI-SMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN 489
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 79 GLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYK 138
G ++F A + DL G+ R R+G+ + ++ +IH C V A
Sbjct: 351 GTITF-AQEMLGDLSGEAR------------RRGI----KPFSDVIHSLCRMRNVKDAKA 393
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGG 198
+L +MI +G +P A +N +V A + + EA +L++M RGL PDV Y II+ G
Sbjct: 394 LLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIIS-GY 452
Query: 199 DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE 258
+ +D A E A+ +K TY LI C EA L EM R G+
Sbjct: 453 AKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNA 512
Query: 259 PAYTSLMNAFCLEG 272
Y L+ +FCL+
Sbjct: 513 DEYNKLIQSFCLKA 526
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 132/330 (40%), Gaps = 55/330 (16%)
Query: 53 GLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGK-GRMXXXXXXXXXMNRK 111
GLW+L ++E+ EK + G+++ + L GK G+
Sbjct: 212 GLWDL----------VKEIGEKESC-GVLNLEILNELIALFGKLGKSKAAFDVFSKTEEF 260
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G + +TY + C + +D A V +M+ G ++ +C+E + EA
Sbjct: 261 GFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEA 320
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALE----FKAKMVEKGILPHADTYS 227
+ + + S T+IT + + A E + +GI P +D
Sbjct: 321 YSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSD--- 377
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG---EFSKVFHLHDAI 284
+I SLC R + +A L +M+ G + G + +++A G E +V L ++
Sbjct: 378 -VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMES- 435
Query: 285 KGFLPDFVT-----------------------------RFSPSLVTYNALIYGHCCMGRF 315
+G PD T + SP VTY+ALI G+C + +
Sbjct: 436 RGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSP--VTYHALIRGYCKIEEY 493
Query: 316 EEALGILRGMAEMGLSPDAVSYSTVISRFC 345
+EAL +L M G+ P+A Y+ +I FC
Sbjct: 494 DEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 93 CGK-GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS 151
C K G + M +GL D TYT +I + +D+A ++L+E + S
Sbjct: 417 CSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLS 476
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
TY+ L+R YC+ + EA +L M G+ P+ D YN +I + L+ + A
Sbjct: 477 PVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLF 536
Query: 212 AKMVEKGI 219
+M +KG+
Sbjct: 537 EEMKQKGL 544
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDR-GFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
++ +L+ + ++ D ++ +E+ + P + +YN L++A CE+D + EA +L
Sbjct: 146 SFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDE 205
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
+ ++GL PD+ +NT++ + + + E AKMVEK + TY+ ++ L E
Sbjct: 206 IENKGLKPDIVTFNTLL-LSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEA 264
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
+ E +LF E+ GL P
Sbjct: 265 KSKELVNLFGELKASGL-----------------------------------------KP 283
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
+ ++NA+I G G+ +EA + + + G PD +++ ++ CK G+ A EL
Sbjct: 284 DVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
Query: 358 VE 359
E
Sbjct: 344 KE 345
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 3/187 (1%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+VS+N I+ LC K + + KGL D T+ +L+ + + + ++
Sbjct: 180 IVSYNTL--IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEI 237
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
++M+++ + + TYN + E + +E + + GL PDV +N +I G
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR-GSI 296
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
E ++D A + ++V+ G P T++ L+ ++C A +LF+E G+
Sbjct: 297 NEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQT 356
Query: 260 AYTSLMN 266
L++
Sbjct: 357 TLQQLVD 363
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVT 301
A +F EM ++ +L++A+ L +F V L + + G L P +V+
Sbjct: 128 AQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLS-----IKPDIVS 182
Query: 302 YNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYST-VISRFCKIGEPGMAYELMVEM 360
YN LI C EA+ +L + GL PD V+++T ++S + K G+ + E+ +M
Sbjct: 183 YNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK-GQFELGEEIWAKM 241
Query: 361 NEKEI 365
EK +
Sbjct: 242 VEKNV 246
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 9/247 (3%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
R Y +I + C + V A ++SEM + F +A +N +++ Y + ++ + +
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQR 952
Query: 178 MADRGLSPDVDIYNT-IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
+ + GL PD YNT II + D+ E L +M G+ P DTY LI + +
Sbjct: 953 IKETGLEPDETTYNTLIIMYCRDRRPEEGYLL--MQQMRNLGLDPKLDTYKSLISAFGKQ 1010
Query: 237 RRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS 296
+ L +A LF E+L GL Y ++M G SK L +K
Sbjct: 1011 KCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKN------AGIE 1064
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
P+L T + L+ + G +EA +L + + + + YS+VI + + + E
Sbjct: 1065 PTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIER 1124
Query: 357 MVEMNEK 363
++EM ++
Sbjct: 1125 LLEMKKE 1131
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D TY ++I ++ +A ++ E+ +GF P TYN L+ A+ E + +
Sbjct: 331 DLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVY 390
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGIL---PHADTYSWLIVS 232
+ M G D YNTII G Q +LD AL+ M KG+ P A TY+ LI S
Sbjct: 391 QQMQKMGFGKDEMTYNTIIHMYGKQG-QLDLALQLYKDM--KGLSGRNPDAITYTVLIDS 447
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
L R EA L EML G+
Sbjct: 448 LGKANRTVEAAALMSEMLDVGI-------------------------------------- 469
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
P+L TY+ALI G+ G+ EEA M G PD ++YS ++ + E
Sbjct: 470 ---KPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRK 526
Query: 353 AYELMVEM 360
A+ L +M
Sbjct: 527 AWGLYRDM 534
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 13/242 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
+ + G D +T+ SL+ + ++A + + M+ G SP+V + N L+ A C + R
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK---AKMVEKGILPHAD 224
+ E ++ + D G I + I D E K + M G LP
Sbjct: 838 LEELYVVVEELQDMGFK----ISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIR 893
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI 284
Y +I LC +R+ +A + EM + S++ + ++ K ++ I
Sbjct: 894 LYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRI 953
Query: 285 KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRF 344
K T P TYN LI +C R EE +++ M +GL P +Y ++IS F
Sbjct: 954 KE------TGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
Query: 345 CK 346
K
Sbjct: 1008 GK 1009
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 11/228 (4%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y ++++ + ++DKA + M P V T+N L+ YC + A + R M
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
++G P+V +NT+I G +++ ++ +M+E G T L+ LC E R+
Sbjct: 256 EKGCEPNVVSFNTLIR-GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRV 314
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSP 297
+A L ++L + E Y SL+ C E + + + + + KG P F
Sbjct: 315 DDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF------ 368
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
+ L+ G GR E+A G + M G+ PD+V+++ ++ C
Sbjct: 369 --IACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLC 414
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 11/272 (4%)
Query: 96 GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATY 155
G M M ++ D T+ LI+ +C + D A + EM ++G P+V ++
Sbjct: 207 GDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSF 266
Query: 156 NKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMV 215
N L+R + ++ E + M + G + I+ G +E +D A ++
Sbjct: 267 NTLIRGFLSSGKIEEGVKMAYEMIELGCRFS-EATCEILVDGLCREGRVDDACGLVLDLL 325
Query: 216 EKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFS 275
K +LP Y L+ LC E + A ++ E+ + G + A T+L+ G
Sbjct: 326 NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTE 385
Query: 276 KVFHLHDAI--KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPD 333
K + + G LPD VT+N L+ C +A + + G PD
Sbjct: 386 KASGFMEKMMNAGILPD--------SVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPD 437
Query: 334 AVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+Y ++S F K G L+ EM +K++
Sbjct: 438 ETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDM 469
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 106/250 (42%), Gaps = 13/250 (5%)
Query: 68 IREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
RE+ EK + +VSFN I+ G++ M G + T L+
Sbjct: 251 FREMKEKGCEPNVVSFNTL--IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGL 308
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDV 187
C + VD A ++ +++++ PS Y LV C E++ A ++ + +G +P
Sbjct: 309 CREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTP-C 367
Query: 188 DIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
I T + G + + A F KM+ GILP + T++ L+ LC ++A L
Sbjct: 368 FIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRL 427
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNAL 305
G E Y L++ F EG + L + + K LPD + TYN L
Sbjct: 428 LASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPD--------IFTYNRL 479
Query: 306 IYGHCCMGRF 315
+ G C G+F
Sbjct: 480 MDGLSCTGKF 489
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 103/244 (42%), Gaps = 12/244 (4%)
Query: 120 YTSLIHMFCHQEEVDKA---YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
+ S I +C ++D A + + +ID P+V YN +V Y + + +A +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQ 217
Query: 177 VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
M PDV +N +I G + + D AL+ +M EKG P+ +++ LI
Sbjct: 218 RMGKERAKPDVCTFNILIN-GYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 237 RRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS 296
++ E + EM+ G E L++ C EG + DA L R
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR------VDDACGLVLDLLNKRVL 330
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
PS Y +L+ C + A+ ++ + + G +P ++ +T++ K G A
Sbjct: 331 PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGF 390
Query: 357 MVEM 360
M +M
Sbjct: 391 MEKM 394
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 1/188 (0%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
+ LC +GR+ + K + + Y SL+ C + + +A +++ E+ +G
Sbjct: 305 VDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQ 364
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
+P LV + R +A+G + M + G+ PD +N ++ + D A
Sbjct: 365 TPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTD-AN 423
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+ KG P TY L+ E R E L EML + Y LM+
Sbjct: 424 RLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Query: 269 CLEGEFSK 276
G+FS+
Sbjct: 484 SCTGKFSR 491
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 131/294 (44%), Gaps = 12/294 (4%)
Query: 70 EVAEKTNQKGLVSFNA-TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFC 128
E+ + ++ G +SFNA IQ L ++ G +D +TY +L+ +F
Sbjct: 230 EMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFL 289
Query: 129 HQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVD 188
++ KA+++ M +TY ++ + + R+ A + + M +R L P
Sbjct: 290 NKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFS 349
Query: 189 IYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFRE 248
++++++ G + LDT+++ +M G P A + LI S +L A L+ E
Sbjct: 350 VFSSLVDSMG-KAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDE 408
Query: 249 MLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDFVTRFSPSLVTYNALI 306
M + G YT ++ + G+ + ++ GFLP +PS TY+ L+
Sbjct: 409 MKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP------TPS--TYSCLL 460
Query: 307 YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
H G+ + A+ I M GL P SY ++++ +A ++++EM
Sbjct: 461 EMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 89/212 (41%), Gaps = 7/212 (3%)
Query: 151 SVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEF 210
S YN++++ + +++ A + + G D YN ++ ++ L A E
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYK-AFEI 300
Query: 211 KAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCL 270
M + L TY +I SL RL AF LF++M L ++SL+++
Sbjct: 301 YESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGK 360
Query: 271 EGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGL 330
G ++ ++GF PS + +LI + G+ + AL + M + G
Sbjct: 361 AGRLDTSMKVYMEMQGF------GHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGF 414
Query: 331 SPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
P+ Y+ +I K G+ +A + +M +
Sbjct: 415 RPNFGLYTMIIESHAKSGKLEVAMTVFKDMEK 446
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 10/229 (4%)
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
L DQ+ Y +I+M+ +KA KV S M+ +G S TYN L+ E +E +
Sbjct: 243 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVS 299
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
I M + PDV Y +I G E + AL +M++ G+ P Y+ L+ +
Sbjct: 300 KIYDQMQRSDIQPDVVSYALLIKAYGRARRE-EEALSVFEEMLDAGVRPTHKAYNILLDA 358
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
+ +A +F+ M R + +YT++++A+ + IK V
Sbjct: 359 FAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK------V 412
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
F P++VTY LI G+ E+ + + M G+ + +T++
Sbjct: 413 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 461
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 44/279 (15%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
+YT+L+ + + + A + M G PS TY +++ + E D+ +EA + +
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 179 ADRG---LSPDVDIYNTIITW---GGDQE------------------LELDTALEFKA-- 212
D L PD +Y+ +I G+ E + ++ + F+
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY 295
Query: 213 --------KMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
+M I P +Y+ LI + RR EA +F EML G+ AY L
Sbjct: 296 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRG 324
++AF + G + + +++ R P L +Y ++ + E A +
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRR------DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 409
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
+ G P+ V+Y T+I + K + E M+E+ EK
Sbjct: 410 IKVDGFEPNIVTYGTLIKGYAKAND----VEKMMEVYEK 444
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 11/228 (4%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
LI + + A +VLS + G +P+V +Y L+ +Y + A I R M G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 183 LSPDVDIYNTIITW--GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLS 240
P Y I+ GD+ E + E + + P Y +I
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 241 EAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLV 300
+A +F M+ G+ Y SLM+ E + +V ++D ++ + P +V
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQR------SDIQPDVV 315
Query: 301 TYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+Y LI + R EEAL + M + G+ P +Y+ ++ F G
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 363
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M R + D +Y LI + ++A V EM+D G P+ YN L+ A+
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V +A + + M + PD+ Y T+++ + +++ A +F ++ G P+ TY
Sbjct: 365 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNAS-DMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
LI + + +++ +M G+ + T++M+A
Sbjct: 424 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 463
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 10/229 (4%)
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
L DQ+ Y +I+M+ +KA KV S M+ +G S TYN L+ E +E +
Sbjct: 250 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVS 306
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
I M + PDV Y +I G E + AL +M++ G+ P Y+ L+ +
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGRARRE-EEALSVFEEMLDAGVRPTHKAYNILLDA 365
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
+ +A +F+ M R + +YT++++A+ + IK V
Sbjct: 366 FAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK------V 419
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
F P++VTY LI G+ E+ + + M G+ + +T++
Sbjct: 420 DGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 468
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 44/279 (15%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
+YT+L+ + + + A + M G PS TY +++ + E D+ +EA + +
Sbjct: 183 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
Query: 179 ADRG---LSPDVDIYNTIITW---GGDQE------------------LELDTALEFKA-- 212
D L PD +Y+ +I G+ E + ++ + F+
Sbjct: 243 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY 302
Query: 213 --------KMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
+M I P +Y+ LI + RR EA +F EML G+ AY L
Sbjct: 303 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 362
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRG 324
++AF + G + + +++ R P L +Y ++ + E A +
Sbjct: 363 LDAFAISGMVEQAKTVFKSMRR------DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKR 416
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
+ G P+ V+Y T+I + K + E M+E+ EK
Sbjct: 417 IKVDGFEPNIVTYGTLIKGYAKAND----VEKMMEVYEK 451
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 11/228 (4%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
LI + + A +VLS + G +P+V +Y L+ +Y + A I R M G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 183 LSPDVDIYNTIITW--GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLS 240
P Y I+ GD+ E + E + + P Y +I
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 241 EAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLV 300
+A +F M+ G+ Y SLM+ E + +V ++D ++ + P +V
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMS---FETSYKEVSKIYDQMQR------SDIQPDVV 322
Query: 301 TYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+Y LI + R EEAL + M + G+ P +Y+ ++ F G
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M R + D +Y LI + ++A V EM+D G P+ YN L+ A+
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V +A + + M + PD+ Y T+++ + +++ A +F ++ G P+ TY
Sbjct: 372 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNAS-DMEGAEKFFKRIKVDGFEPNIVTYG 430
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
LI + + +++ +M G+ + T++M+A
Sbjct: 431 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 470
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 24/308 (7%)
Query: 66 GRIREVAE-----KTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTY 120
GRI E+ E + N F TA I+ L +G + M R + D Y
Sbjct: 277 GRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAY 336
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
+L+ C V++ Y++ EM + Y L+ + + +VR A + + D
Sbjct: 337 GTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVD 396
Query: 181 RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLS 240
G D+ IYN +I G ++D A + +E+ + P +T S ++V+ RLS
Sbjct: 397 SGYIADIGIYNAVIK-GLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLS 455
Query: 241 EAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFS----KVFHLHDAIKGFLPDFVTRFS 296
+ ++ + G + T C + E + VF++ T+
Sbjct: 456 DFSNVLERIGELGYPVSD-YLTQFFKLLCADEEKNAMALDVFYI----------LKTKGH 504
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA--- 353
S+ YN L+ MG +++L + M ++G PD+ SYS I F + G+ A
Sbjct: 505 GSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSF 564
Query: 354 YELMVEMN 361
+E ++EM+
Sbjct: 565 HEKIIEMS 572
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 112/293 (38%), Gaps = 9/293 (3%)
Query: 73 EKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEE 132
+K + ++NA A L G M+ +G ++ + LI M
Sbjct: 151 QKGYKHDFAAYNAFAYC--LNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRR 208
Query: 133 VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT 192
+ Y V +M GF P V YN+++ A + A + + GL + +
Sbjct: 209 GLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTF-M 267
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
I+ G + ++ LE +M E P Y+ +I +L E L + ++ EM R
Sbjct: 268 ILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRD 327
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM 312
+ AY +L+ C +G + + L +KG + Y LI G
Sbjct: 328 EIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKG------KQILIDREIYRVLIEGFVAD 381
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
G+ A + + + G D Y+ VI C + + AY+L E+E+
Sbjct: 382 GKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEEL 434
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 125/318 (39%), Gaps = 45/318 (14%)
Query: 92 LCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS 151
LC GR+ M K + +D+ Y LI F +V A + +++D G+
Sbjct: 343 LCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIAD 402
Query: 152 VATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
+ YN +++ C ++V +A + +V + L PD + + I+ + ++ +F
Sbjct: 403 IGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMV----AYVVMNRLSDFS 458
Query: 212 AKMVEKGIL--PHADTYSWLIVSLCF-ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+ G L P +D + LC E + + A D+F +L+ Y LM A
Sbjct: 459 NVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFY-ILKTKGHGSVSVYNILMEAL 517
Query: 269 CLEGEFSKVFHLHDAIK--GFLPD----------FVTRFS-----------------PSL 299
G+ K L ++ GF PD FV + PS+
Sbjct: 518 YKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSI 577
Query: 300 VTYNALIYGHCCMGRFEEALGILR---GMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
Y +L G C +G + + ++R G E G P Y+ + CK ++
Sbjct: 578 AAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG--PMEFKYALTVCHVCKGSNAEKVMKV 635
Query: 357 MVEMNEKEIRGVLMKSCI 374
+ EMN++ GV + I
Sbjct: 636 VDEMNQE---GVFINEVI 650
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 11/220 (5%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
GL + T+ L+ C +++ ++L M + P V Y +++ E + +
Sbjct: 258 GLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDAS 317
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+ M + PDV Y T++ G ++ ++ E +M K IL + Y LI
Sbjct: 318 LRVWDEMRRDEIKPDVMAYGTLVV-GLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE 376
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD-AIKGFL-P 289
+ ++ A +L+ +++ G Y +++ C + K + L AI+ L P
Sbjct: 377 GFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEP 436
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG 329
DF T SP +V Y M R + +L + E+G
Sbjct: 437 DFET-LSPIMVAY-------VVMNRLSDFSNVLERIGELG 468
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 12/212 (5%)
Query: 66 GRIREVAEKTNQKGLVS--FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSL 123
G+ +E +K + +G+ F+ + + +C G+ M + + LD Y ++
Sbjct: 206 GKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTV 265
Query: 124 IHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGL 183
I + V+ +V EM +RG P+VAT+N +++ CE+ R+R+A +L M RG
Sbjct: 266 IRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGC 325
Query: 184 SPDVDIYNTIITWGGDQELELDTA-LEFKAKMVEKGILPHADTYSWLIVSLCFERR--LS 240
PD Y + + LE + L +M+ G+ P DTY L+ FER L
Sbjct: 326 QPDSITYMCLFS-----RLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRK--FERWGFLQ 378
Query: 241 EAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG 272
+++ M G + AY ++++A +G
Sbjct: 379 PVLYVWKTMKESGDTPDSAAYNAVIDALIQKG 410
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 12/230 (5%)
Query: 135 KAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
K + +M G + + +Y+ + C+ + +A + + M R + DV YNT+I
Sbjct: 207 KCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVI 266
Query: 195 -TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG 253
G Q +E + +M E+G P+ T++ +I LC + R+ +A+ + EM + G
Sbjct: 267 RAIGASQGVEF--GIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRG 324
Query: 254 LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMG 313
Y L FS++ + + F + P + TY L+ G
Sbjct: 325 CQPDSITYMCL---------FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWG 375
Query: 314 RFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
+ L + + M E G +PD+ +Y+ VI + G MA E EM E+
Sbjct: 376 FLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 425
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
T+ +LI ++ ++ A + SEM+ G T+N ++ + EA +L+ M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
++G+SPD YN +++ D +++ ALE+ K+ + G+ P T+ ++ LC +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAG-DIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD---------------- 282
++E + EM R + E + +M + EG + L +
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAV 485
Query: 283 ----AIKGFLPDFVTRF---------SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG 329
A KG + T F ++ YN +I + E+AL + +GM G
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 330 LSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
PD +Y+++ + A ++ EM
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEM 576
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 14/256 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +G D+ TY SL M + VD+A ++L+EM+D G P TY ++ +Y
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ +A + M G+ P+ +Y ++I G + ++ A+++ M E G+ + +
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLIN-GFAESGMVEEAIQYFRMMEEHGVQSNHIVLT 659
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEP--AYTSLMNAFCLE-GEFSKVFHLHDAI 284
LI + L EA ++ +M S G P A ++ M + C + G S+ + +A+
Sbjct: 660 SLIKAYSKVGCLEEARRVYDKMKD---SEGGPDVAASNSMLSLCADLGIVSEAESIFNAL 716
Query: 285 KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRF 344
+ + + ++++ ++Y + MG +EA+ + M E GL D S++ V++ +
Sbjct: 717 R-------EKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACY 769
Query: 345 CKIGEPGMAYELMVEM 360
G+ EL EM
Sbjct: 770 AADGQLSECCELFHEM 785
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 130/310 (41%), Gaps = 16/310 (5%)
Query: 44 LQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNAT--ATIQDLCGKGRMXXX 101
+ P++ + L +L A D+ E K + GL T A + LC + +
Sbjct: 371 ISPDTKTYNILLSLHADA-GDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEV 429
Query: 102 XXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRA 161
M+R + +D+ + ++ M+ ++ V +A K L E S T ++
Sbjct: 430 EAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQA-KALFERFQLDCVLSSTTLAAVIDV 488
Query: 162 YCEEDRVREAAGIL---RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKG 218
Y E+ EA + R M+ G DV YN +I G +L + AL M +G
Sbjct: 489 YAEKGLWVEAETVFYGKRNMS--GQRNDVLEYNVMIKAYGKAKLH-EKALSLFKGMKNQG 545
Query: 219 ILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF 278
P TY+ L L + EA + EML G G Y +++ ++ G S
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAV 605
Query: 279 HLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYS 338
L++A++ T P+ V Y +LI G G EEA+ R M E G+ + + +
Sbjct: 606 DLYEAMEK------TGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLT 659
Query: 339 TVISRFCKIG 348
++I + K+G
Sbjct: 660 SLIKAYSKVG 669
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 8/254 (3%)
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
N G D Y +I + + +KA + M ++G P TYN L + D V
Sbjct: 507 NMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLV 566
Query: 169 REAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
EA IL M D G P Y +I L L A++ M + G+ P+ Y
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL-LSDAVDLYEAMEKTGVKPNEVVYGS 625
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFL 288
LI + EA FR M G+ + TSL+ A+ G + ++D +K
Sbjct: 626 LINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD-- 683
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
+ P + N+++ +G EA I + E G + D +S++T++ + +G
Sbjct: 684 ----SEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMG 738
Query: 349 EPGMAYELMVEMNE 362
A E+ EM E
Sbjct: 739 MLDEAIEVAEEMRE 752
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 111/276 (40%), Gaps = 44/276 (15%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ + TSLI + +++A +V +M D P VA N ++ +
Sbjct: 646 MEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGI 705
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V EA I + ++G + DV + T++ + LD A+E +M E G+L +++
Sbjct: 706 VSEAESIFNALREKG-TCDVISFATMMYLYKGMGM-LDEAIEVAEEMRESGLLSDCTSFN 763
Query: 228 WLIVSLCFERRLSEAFDLFREML--------------------RGGLST----------- 256
++ + +LSE +LF EML +GG+ +
Sbjct: 764 QVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYN 823
Query: 257 -GEPAYTSLMNA--FCLEGEFSKVFH-LHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM 312
+P T + A F G ++ + G +P YNA+IY +
Sbjct: 824 EAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPR-------EHFAYNAVIYTYSAS 876
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
G + AL M E GL PD V+ + ++ + K G
Sbjct: 877 GDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAG 912
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRF 295
RL++A +LF EML+ G+ + ++++ G S+ L + KG PD
Sbjct: 320 RLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPD----- 374
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
TYN L+ H G E AL R + ++GL PD V++ V+ C+
Sbjct: 375 ---TKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEA 431
Query: 356 LMVEMNEKEIR 366
++ EM+ IR
Sbjct: 432 VIAEMDRNSIR 442
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 51/256 (19%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDR-GFSPSVATYNKLVRAYCEEDRVREAAGILR 176
+++ +L+ + + +++D+A K E+ ++ G +P + TYN +++A C + + + I
Sbjct: 158 KSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFE 217
Query: 177 VMADRGLSPDVDIYNTIITWGGDQEL--ELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
+ G PD+ +NT++ +EL E D + M K + P+ +Y+ + L
Sbjct: 218 ELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDL---MKSKNLSPNIRSYNSRVRGLT 274
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
++ ++A +L M G+S
Sbjct: 275 RNKKFTDALNLIDVMKTEGIS--------------------------------------- 295
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
P + TYNALI + EE + M E GL+PD V+Y +I CK G+ A
Sbjct: 296 --PDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRA- 352
Query: 355 ELMVEMNEKEIRGVLM 370
VE++E+ I+ L+
Sbjct: 353 ---VEVSEEAIKHKLL 365
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 5/176 (2%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
LV++N I+ LC KG M + + G D ++ +L+ F +E + ++
Sbjct: 193 LVTYNTM--IKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRI 250
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT-WGG 198
M + SP++ +YN VR + +A ++ VM G+SPDV YN +IT +
Sbjct: 251 WDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRV 310
Query: 199 DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
D LE ++ +M EKG+ P TY LI LC + L A ++ E ++ L
Sbjct: 311 DNNLE--EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 364
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 8/271 (2%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEM-- 143
T+ I C G++ M++ L+ TY+ ++ C ++++A ++L+EM
Sbjct: 204 TSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEK 263
Query: 144 IDRG--FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
D G SP+ TY +++A+CE+ RV EA +L M +RG P+ +I + +
Sbjct: 264 EDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLEND 323
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
++ + K+V+ G + ++ +S VSL +R EA +FR ML G+ A
Sbjct: 324 EDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLAC 383
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGI 321
+ + CL + F L+ I+ D + + + L+ G C G EA +
Sbjct: 384 SHVFRELCLLERYLDCFLLYQEIEK--KDVKSTIDSDI--HAVLLLGLCQQGNSWEAAKL 439
Query: 322 LRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
+ M + + +I K G+ +
Sbjct: 440 AKSMLDKKMRLKVSHVEKIIEALKKTGDEDL 470
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 12/259 (4%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D Y +I +F + +++ A ++ EM G P V TY ++ YC ++ +A +
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKG----ILPHADTYSWLIV 231
+ M+ + Y+ I+ G + +++ ALE A+M ++ I P+A TY+ +I
Sbjct: 224 KEMSKHDCVLNSVTYSRILE-GVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQ 282
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
+ C +RR+ EA + M G L+ E K A+ +
Sbjct: 283 AFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVK------ALSKLIDKL 336
Query: 292 VTRFSPSLV-TYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
V SL +++ M R+EEA I R M G+ PD ++ S V C +
Sbjct: 337 VKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERY 396
Query: 351 GMAYELMVEMNEKEIRGVL 369
+ L E+ +K+++ +
Sbjct: 397 LDCFLLYQEIEKKDVKSTI 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 229 LIVSLCFERRLS-EAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
++++LC + L+ EA + R+ + AY ++ F +G+ + L IK
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADML---IKEM 191
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
D V + P ++TY ++I G+C G+ ++A + + M++ ++V+YS ++ CK
Sbjct: 192 --DCVGLY-PDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKS 248
Query: 348 GEPGMAYELMVEMNEKEIRGVLMKSCINH 376
G+ A EL+ EM +++ G++ + + +
Sbjct: 249 GDMERALELLAEMEKEDGGGLISPNAVTY 277
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLAL--DQRTYTSLIHMFCH-----------QEEVDK 135
I LC G M G D TYT LI +C + + +
Sbjct: 207 INALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWE 266
Query: 136 AYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT 195
A ++ EM+ RGF P V TYN L+ C+ +R+ A + M +G P+ YN+ I
Sbjct: 267 ANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIR 326
Query: 196 WGGDQELELDTALEFKAKMVEKGI-LPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
+ E++ A+E M + G +P + TY+ LI +L RR +EA DL EM+ GL
Sbjct: 327 YYSVTN-EIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGL 385
Query: 255 STGEPAYTSLMNAFCLEG 272
E Y + +A EG
Sbjct: 386 VPREYTYKLVCDALSSEG 403
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 95/240 (39%), Gaps = 26/240 (10%)
Query: 44 LQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGK-GRMXXXX 102
L + N GLW+ +R+V+ + N K +V+ + + G+ G +
Sbjct: 136 LLAKGNDFKGLWDF----------LRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEAL 185
Query: 103 XXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF--SPSVATYNKLVR 160
M D Y ++I+ C KA +L +M GF P TY L+
Sbjct: 186 ATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILIS 245
Query: 161 AYCE-----------EDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALE 209
+YC R+ EA + R M RG PDV YN +I G + + ALE
Sbjct: 246 SYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLID-GCCKTNRIGRALE 304
Query: 210 FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST-GEPAYTSLMNAF 268
M KG +P+ TY+ I + A ++ R M + G G YT L++A
Sbjct: 305 LFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHAL 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 93/226 (41%), Gaps = 21/226 (9%)
Query: 151 SVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEF 210
+ A+ L++ EE V+EA M + PDV YNTII + A
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIIN-ALCRVGNFKKARFL 222
Query: 211 KAKMVEKGILPHADTYSW--LIVSLC-----------FERRLSEAFDLFREMLRGGLSTG 257
+M G DTY++ LI S C RR+ EA +FREML G
Sbjct: 223 LDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPD 282
Query: 258 EPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEE 317
Y L++ C + L + +K P+ VTYN+ I + E
Sbjct: 283 VVTYNCLIDGCCKTNRIGRALELFEDMK------TKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 318 ALGILRGMAEMGLS-PDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
A+ ++R M ++G P + +Y+ +I + A +L+VEM E
Sbjct: 337 AIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVE 382
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ + R+Y L+ FC +++ AY++ +M++R P V +Y L++ +C + +V A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+L M ++G PD T+I DQ + D ++ +M+ KG PH + L+
Sbjct: 245 MELLDDMLNKGFVPD----RTLIGGLCDQGM-FDEGKKYLEEMISKGFSPHFSVSNCLVK 299
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKV-FHLHDAIK 285
C ++ EA D+ +++ G + + ++ C E E K+ L DA+K
Sbjct: 300 GFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVK 354
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 120/277 (43%), Gaps = 15/277 (5%)
Query: 94 GKGRMXXXXXXXXXMNRK-GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSV 152
G+GR +R G L +T LI ++ + +K +M++ F+P
Sbjct: 95 GRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQP 154
Query: 153 ATYNKLVRAYCEE-DRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFK 211
N+++ +++A + + G+ P+ YN ++ + +L A +
Sbjct: 155 KHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLND-DLSIAYQLF 213
Query: 212 AKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
KM+E+ ++P D+Y LI C + +++ A +L +ML G +L+ C +
Sbjct: 214 GKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDR----TLIGGLCDQ 269
Query: 272 GEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGL 330
G F D K +L + +++ FSP N L+ G C G+ EEA ++ + + G
Sbjct: 270 GMF-------DEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 322
Query: 331 SPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRG 367
+ + ++ VI C E + + ++EI G
Sbjct: 323 TLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITG 359
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 46/259 (17%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ D TY +I +FC +Y +++EM +G P+ +++ ++ + ED+ E
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+L +M DRG++ V YN I
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQ------------------------------------ 265
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLP 289
SLC ++ EA L ML G+ Y+ L++ FC E +F + L + +G P
Sbjct: 266 SLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKP 325
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
D F+ LIY C G FE AL + + E P ++++ K +
Sbjct: 326 DSECYFT--------LIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSK 377
Query: 350 PGMAYELMVEMNEKEIRGV 368
A EL+ ++ EK R V
Sbjct: 378 VEEAKELIGQVKEKFTRNV 396
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 96/235 (40%), Gaps = 48/235 (20%)
Query: 147 GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT--WGGDQELEL 204
G P + TYN++++ +CE + I+ M +G+ P+ + +I+ + D+ E+
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 205 DTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
L A M ++G+ TY+ I SLC ++ EA L ML G+
Sbjct: 242 GKVL---AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMK--------- 289
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRG 324
P+ VTY+ LI+G C FEEA + +
Sbjct: 290 --------------------------------PNTVTYSHLIHGFCNEDDFEEAKKLFKI 317
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKE--IRGVLMKSCINHL 377
M G PD+ Y T+I CK G+ A L E EK +MKS +N L
Sbjct: 318 MVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGL 372
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +G+ + TY I C +++ +A +L M+ G P+ TY+ L+ +C ED
Sbjct: 248 MKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDD 307
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITW---GGDQELELDTALEFKAKMVEKGILPHAD 224
EA + ++M +RG PD + Y T+I + GGD +TAL + +EK +P
Sbjct: 308 FEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGD----FETALSLCKESMEKNWVPSFS 363
Query: 225 TYSWLIVSLCFERRLSEAFDL 245
L+ L + ++ EA +L
Sbjct: 364 IMKSLVNGLAKDSKVEEAKEL 384
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M RKG+ + ++ +I F +++ D+ KVL+ M DRG + V+TYN +++ C+ +
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+EA +L M G+ P+ Y+ +I G E + + A + MV +G P ++ Y
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLI-HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYF 331
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK 285
LI LC A L +E + SL+N + + + L +K
Sbjct: 332 TLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVK 389
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 12/228 (5%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
+ SL+ + + A ++ M G P T+N L Y + +A ++ M
Sbjct: 293 AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM 352
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
++G++P+V + I + G + AL+ KM E+G+ P+A T S L+ L
Sbjct: 353 KEKGVAPNVVSWTAIFS-GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSL 411
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
L ++ LR L T+L++ + G+ + IK + S
Sbjct: 412 LHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK----------NKS 461
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
L ++N ++ G+ GR EE + M E G+ PDA+++++V+S CK
Sbjct: 462 LASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS-VCK 508
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 125/261 (47%), Gaps = 25/261 (9%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
R GL + SLI M+ +++ + KV + M DR S ++N ++ +Y + V
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYVD 172
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
+A G+L M GL PD+ +N++++ + L D A+ +M G+ P + S L
Sbjct: 173 DAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKD-AIAVLKRMQIAGLKPSTSSISSL 231
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSK---VFHLHDAIKG 286
+ ++ L + +LR L T+L++ + G VF + DA
Sbjct: 232 LQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA--- 288
Query: 287 FLPDFVTRFSPSLVTYNALIYG--HCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRF 344
++V +N+L+ G + C+ + EAL I M + G+ PDA++++++ S +
Sbjct: 289 ----------KNIVAWNSLVSGLSYACLLKDAEALMIR--MEKEGIKPDAITWNSLASGY 336
Query: 345 CKIGEPGMAYELMVEMNEKEI 365
+G+P A +++ +M EK +
Sbjct: 337 ATLGKPEKALDVIGKMKEKGV 357
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 113/256 (44%), Gaps = 9/256 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M +G+ D+ T+ L+H + + + + LS MI +G P+ + + + C+
Sbjct: 935 MQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGD 994
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V++A + +VM +G + + T I + E+ A +F ++ G++ A Y
Sbjct: 995 VKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMM--APNYD 1052
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
+I L L A L ML+ G +Y S++N + K H +
Sbjct: 1053 NIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVEL 1112
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
SPS+ T++ L++ C + E+ +++ M +G SP + TVI RF ++
Sbjct: 1113 ------GLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRF-RV 1165
Query: 348 GEPGMAYELMVEMNEK 363
+ + M+EM +K
Sbjct: 1166 EKNTVKASEMMEMMQK 1181
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 140/370 (37%), Gaps = 58/370 (15%)
Query: 35 IPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATAT------ 88
+ G A N P+ N LWN R G + EV + ++ +S+ + +
Sbjct: 656 VWGAAQNDNWLPDLNDCGDLWNCLVRK----GLVEEVVQ-LFERVFISYPLSQSEACRIF 710
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
++ L G + +G ++Q Y LI C +++ A+ +L EM+D+
Sbjct: 711 VEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKH 770
Query: 149 SPSVATYNKLVRAYCEEDR-----------------------------VREAAGILRVMA 179
PS+ + L+ C ++ + +A LR+M
Sbjct: 771 IPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIML 830
Query: 180 DRGLSPDVDIYNTIIT--WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
GLS IYN + G+ ++++ L MV K I+ +Y + +C E
Sbjct: 831 SNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGL---MVRKNIICSVKSYREYVRKMCLEP 887
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG----EFSKVFHLHDAIKGFLPDFVT 293
+ A L +L G + G +++ + E +KV L +G LPD
Sbjct: 888 QSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVL-LEMQGRGVLPD--- 943
Query: 294 RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMA 353
T+N L++G+ + +L L M G+ P+ S V S C G+ A
Sbjct: 944 -----ETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKA 998
Query: 354 YELMVEMNEK 363
+L M K
Sbjct: 999 LDLWQVMESK 1008
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 68/134 (50%)
Query: 61 TEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTY 120
++ ++ + + + + G+++ N I+ L +G + M + +Y
Sbjct: 1027 SKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSY 1086
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
S+I+ ++DKA +EM++ G SPS++T++ LV +CE +V E+ +++ M
Sbjct: 1087 DSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVG 1146
Query: 181 RGLSPDVDIYNTII 194
G SP +++ T+I
Sbjct: 1147 LGESPSQEMFKTVI 1160
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 6/213 (2%)
Query: 87 ATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTY-TSLIHMFCHQEEVDKAYKVLSEMID 145
A LC G + M KG L T ++ + E+ KA L+ +
Sbjct: 984 AVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTR 1043
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
G Y+ +++ + + A +L M P Y+++I G + +LD
Sbjct: 1044 NGMMA--PNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVIN-GLLRYNQLD 1100
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A++F +MVE G+ P T+S L+ C ++ E+ L + M+ G S + + +++
Sbjct: 1101 KAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVI 1160
Query: 266 NAFCLEGEFSKVFHLHDAIK--GFLPDFVTRFS 296
+ F +E K + + ++ G+ DF T +S
Sbjct: 1161 DRFRVEKNTVKASEMMEMMQKCGYEVDFETHWS 1193
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 106/244 (43%), Gaps = 17/244 (6%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFS---PSVATYNKLVRAYCE 164
M RKGL Y LI + AY++ + ++ ++ + K++ C
Sbjct: 209 MRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCL 268
Query: 165 EDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHAD 224
+ +V+EA + R + G + IY+ IT G +++ + + L F ++ + P
Sbjct: 269 DQKVQEARVLARKLVALGCILNSSIYSK-ITIGYNEKQDFEDLLSFIGEVKYE---PDVF 324
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSK-VFHLHDA 283
+ ++ SLC A+ E+ G E + L+ C EG+ + V +L +
Sbjct: 325 VGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEI 384
Query: 284 I-KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
+ KG+ PD + +YNA++ G G ++ IL M E G+ ++ +++
Sbjct: 385 MSKGYKPD--------VYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVT 436
Query: 343 RFCK 346
+CK
Sbjct: 437 GYCK 440
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 93/247 (37%), Gaps = 25/247 (10%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
++H C + ++AY + E+ GF T+ L+ C E ++ A L + +G
Sbjct: 329 ILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKG 388
Query: 183 LSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEA 242
PDV YN I++ + L T +M E G++ T+ ++ C R+ EA
Sbjct: 389 YKPDVYSYNAILSGLFRKGLWQHTHCILD-EMKENGMMLSLSTFKIMVTGYCKARQFEEA 447
Query: 243 FDLFREMLRGGLSTGEPAYTSLMNAFCLEG--------------EFSKVFHLHDAIKGF- 287
+ +M GL L AF L G FSK D G
Sbjct: 448 KRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNGLY 507
Query: 288 ----LPDFVTRFS-----PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYS 338
L + R + L +N+LI G + AL +L MA G S++
Sbjct: 508 LHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFA 567
Query: 339 TVISRFC 345
++ C
Sbjct: 568 VLMRSLC 574
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 111/297 (37%), Gaps = 28/297 (9%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
+Q+ C KG M + +D TYTSLI FC +E ++ V + +
Sbjct: 606 VQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNW 665
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGIL-RVMADRGLSPD--VDIYNTIITWGGDQELELD 205
P + L + V E + RV LS I+ +T G +
Sbjct: 666 LPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCI--- 722
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A ++ +G + + Y+ LI LC E++ S AF + EML + L+
Sbjct: 723 -AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLI 781
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
C + F+L + I S V Y ALI G G+ +A LR M
Sbjct: 782 PRLCRANKAGTAFNLAEQI-----------DSSYVHY-ALIKGLSLAGKMLDAENQLRIM 829
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYE----LMVEMN----EKEIRGVLMKSCI 374
GLS Y+ + +CK G M E LMV N K R + K C+
Sbjct: 830 LSNGLSSYNKIYNVMFQGYCK-GNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCL 885
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 90 QDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFS 149
++LC + ++ KG + ++Y+ +I C V ++Y L EM G +
Sbjct: 370 KNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLA 429
Query: 150 PSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALE 209
P V+ YN L+ A C+ + +R A + M G ++ YN +I +E E + +L
Sbjct: 430 PDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIR-KLSEEGEAEESLR 488
Query: 210 FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFRE 248
KM+E+GI P Y LI LC E ++ A ++FR+
Sbjct: 489 LFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 118 RTYTSLIHMFCHQEEVD---KAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGI 174
RT + L C ++ D KAY++LS +G+ + +Y+ ++ C+ RVRE+
Sbjct: 363 RTLSKLSKNLCRHDKSDHLIKAYELLS---SKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 175 LRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
L+ M GL+PDV +YN +I E+ + A + +M +G + TY+ LI L
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEM-IRPAKKLWDEMFVEGCKMNLTTYNVLIRKLS 478
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
E E+ LF +ML G+ E Y SL+ C E
Sbjct: 479 EEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKE 515
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I LC GR+ M ++GLA D Y +LI C E + A K+ EM G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
++ TYN L+R EE E+ + M +RG+ PD IY ++I G +E +++ A+
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIE-GLCKETKIEAAM 522
Query: 209 EFKAKMVEKGILPHAD----TYSWLIVSLCFERRLSEAFDLFRE 248
E K +E+ H S +++LC EA L RE
Sbjct: 523 EVFRKCMERD---HKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 100/257 (38%), Gaps = 43/257 (16%)
Query: 147 GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDT 206
G +P + Y + R+ EA + V+ D DI + +I G ++ D+
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI--GSVSAVDPDS 345
Query: 207 ALEFKAKMVEKGILPHADT-----------------------------------YSWLIV 231
A+EF MV G LP T YS +I
Sbjct: 346 AVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMIS 405
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
LC R+ E++ +EM + GL+ Y +L+ A C K + A K + F
Sbjct: 406 FLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACC------KAEMIRPAKKLWDEMF 459
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
V +L TYN LI G EE+L + M E G+ PD Y ++I CK +
Sbjct: 460 VEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIE 519
Query: 352 MAYELMVEMNEKEIRGV 368
A E+ + E++ + V
Sbjct: 520 AAMEVFRKCMERDHKTV 536
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 9/222 (4%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY SLIH+ C + A V E+ G P +TY L++ C+ R+ +A I M
Sbjct: 291 TYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM 350
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
G PD +YN ++ G + ++ A + KMV++G+ TY+ LI L R
Sbjct: 351 QYNGFVPDTIVYNCLLD-GTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGR 409
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSP 297
F LF ++ + G ++ + C EG+ L A+K + + TR FS
Sbjct: 410 AEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK------LEGAVK-LVEEMETRGFSV 462
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYST 339
LVT ++L+ G GR++ +++ + E L P+ + ++
Sbjct: 463 DLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 73/189 (38%), Gaps = 1/189 (0%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
+ I LC G+ + G D TY LI C +D A ++ EM
Sbjct: 293 NSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQY 352
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
GF P YN L+ + +V EA + M G+ YN +I G + +
Sbjct: 353 NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILID-GLFRNGRAE 411
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
+ +KG A T+S + + LC E +L A L EM G S +SL+
Sbjct: 412 AGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLL 471
Query: 266 NAFCLEGEF 274
F +G +
Sbjct: 472 IGFHKQGRW 480
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 1/143 (0%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
L S+ + + KG M A D TY +I D A V
Sbjct: 628 LTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAV 687
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
L + +G + YN L+ A + R+ EA + M G++PDV YNT+I
Sbjct: 688 LDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNS- 746
Query: 200 QELELDTALEFKAKMVEKGILPH 222
+ +L A ++ M++ G LP+
Sbjct: 747 KAGKLKEAYKYLKAMLDAGCLPN 769
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 97/254 (38%), Gaps = 19/254 (7%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
R G Y+ + C + + +L M + G + L+ + +
Sbjct: 85 RPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFE 144
Query: 170 EAAGILRVMADRGLSPDVDIYNTI-ITWGGDQELELDTALEFK-------------AKMV 215
A G+L M + G + +Y+++ I EL L ++ FK +++
Sbjct: 145 SALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVI 204
Query: 216 EKGILPHADTYSWLIVSLCFERRLSE---AFDLFREMLRGGLSTGEPAYTSLMNAFCLEG 272
LP + L+V L SE F+ + M R T +Y ++ F G
Sbjct: 205 IVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTW--SYNICIHGFGCWG 262
Query: 273 EFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSP 332
+ L +K + + F P + TYN+LI+ C G+ ++AL + + G P
Sbjct: 263 DLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEP 322
Query: 333 DAVSYSTVISRFCK 346
D +Y +I CK
Sbjct: 323 DNSTYRILIQGCCK 336
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 16/226 (7%)
Query: 129 HQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVD 188
++E ++ K+ E+ + F V +N L+RA+C E ++EA I + R +PDV
Sbjct: 155 YEETLEAFVKMEKEIFRKKFG--VDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVK 211
Query: 189 IYNTIITWGGDQELELDTALE-FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
N ++ G +E TA E F +MV++G P++ TY I C +R EA LF
Sbjct: 212 TMNILLL--GFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFE 269
Query: 248 EMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSLVTYNAL 305
+M R T+L++ + K L D I +G PD YNAL
Sbjct: 270 DMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPD--------CGAYNAL 321
Query: 306 IYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
+ G A+ +++ M E G+ PD+V++ ++ K E G
Sbjct: 322 MSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFG 367
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 1/182 (0%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I C K M+R + + T+LIH KA ++ E+ RG
Sbjct: 252 IDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGL 311
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPD-VDIYNTIITWGGDQELELDTA 207
+P YN L+ + + V A +++ M ++G+ PD V ++ I +E +
Sbjct: 312 TPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGV 371
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
E+ KM E+ ++P T L+ C ++ DL++ ML G A L A
Sbjct: 372 CEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTA 431
Query: 268 FC 269
C
Sbjct: 432 LC 433
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 18/223 (8%)
Query: 61 TEKDVGRIREVAEKTNQKGLVSFNATATIQDLC-----GKGRMXXXXXXXXXMNRKGLAL 115
TE+++ R + EK + + FN ++ G + M ++G
Sbjct: 188 TEREMKEARSIFEKLHSR----FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKP 243
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
+ TY I FC + +A ++ +M F +V L+ +A +
Sbjct: 244 NSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLF 303
Query: 176 RVMADRGLSPDVDIYNTIITW---GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
++ RGL+PD YN +++ GD + A++ +M EKGI P + T+ + +
Sbjct: 304 DEISKRGLTPDCGAYNALMSSLMKCGD----VSGAIKVMKEMEEKGIEPDSVTFHSMFIG 359
Query: 233 LCFERR--LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE 273
+ + + + +++M L P LM FC GE
Sbjct: 360 MMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGE 402
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 154/344 (44%), Gaps = 58/344 (16%)
Query: 46 PESNKVSGLWNLKARTEKDVGRIR---EVAEKTNQKGLVSFNATATIQDLCGKGRMXXXX 102
PE N VS WN GRI E+ ++ ++ +VS+N+ ++ L +GR+
Sbjct: 136 PERNVVS--WNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSM--VKALVQRGRIDEAM 191
Query: 103 XXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAY 162
M R+ D ++T+++ +VD+A ++ M +R ++ ++N ++ Y
Sbjct: 192 NLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGY 243
Query: 163 CEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPH 222
+ +R+ EA + +VM +R D +NT+IT G + E++ A +M EK ++
Sbjct: 244 AQNNRIDEADQLFQVMPER----DFASWNTMIT-GFIRNREMNKACGLFDRMPEKNVI-- 296
Query: 223 ADTYSWLIVSLCFERRLSEAFDLFREMLR-GGLSTGEPAYTSLMNAFC-----LEGE--- 273
+++ +I + EA ++F +MLR G + Y S+++A +EG+
Sbjct: 297 --SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 274 --FSKVFHLHDAIKGFLPDFVTRFSPS-------------------LVTYNALIYGHCCM 312
SK H + I + +S S L+++N++I +
Sbjct: 355 QLISKSVHQKNEI--VTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHH 412
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG--EPGMAY 354
G +EA+ + M + G P AV+Y ++ G E GM +
Sbjct: 413 GHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 130/318 (40%), Gaps = 26/318 (8%)
Query: 32 KVIIPGFAAAGNLQPESNKV-SGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQ 90
++++ GF G L+ ++ + S W +++K + + +V + +
Sbjct: 191 RILMKGFCLEGKLEEATHLLYSMFWR--------------ISQKGSGEDIVVYRIL--LD 234
Query: 91 DLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLI--HMFCHQEEVDKAYKVLSEMIDRGF 148
LC G + + RKGL +R Y + H E +++ ++L+E + RG
Sbjct: 235 ALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGA 294
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P + +Y+ + EE ++ E +L M +G P IY + +
Sbjct: 295 IPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVS 354
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG-GLSTGEPAYTSLMNA 267
+M++ LP Y+ LI LC + + EA ++M + E Y +L++
Sbjct: 355 VINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDG 414
Query: 268 FCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAE 327
C +G+F + + + + + P + TY+ +I G C M R EA+ L M
Sbjct: 415 LCRDGQFLEASQVMEEM------LIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVS 468
Query: 328 MGLSPDAVSYSTVISRFC 345
+ P++ + + C
Sbjct: 469 QDMVPESSVWKALAESVC 486
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 15/277 (5%)
Query: 92 LCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI----DRG 147
LC R MN +G D+ +Y L+ FC + ++++A +L M +G
Sbjct: 162 LCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKG 221
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT--WGGDQELELD 205
+ Y L+ A C+ V +A IL + +GL Y+ I W E ++
Sbjct: 222 SGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE-GIE 280
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
+ + +G +P D+YS + L E +L E ++ M G Y + +
Sbjct: 281 RVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKV 340
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS-PSLVTYNALIYGHCCMGRFEEALGILRG 324
A C G+ L +A+ + + P++ YN LI G C G+ EA+G L+
Sbjct: 341 KALCRAGK------LKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKK 394
Query: 325 MA-EMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
M+ ++ + +Y T++ C+ G+ A ++M EM
Sbjct: 395 MSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 130/318 (40%), Gaps = 26/318 (8%)
Query: 32 KVIIPGFAAAGNLQPESNKV-SGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNATATIQ 90
++++ GF G L+ ++ + S W +++K + + +V + +
Sbjct: 191 RILMKGFCLEGKLEEATHLLYSMFWR--------------ISQKGSGEDIVVYRIL--LD 234
Query: 91 DLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLI--HMFCHQEEVDKAYKVLSEMIDRGF 148
LC G + + RKGL +R Y + H E +++ ++L+E + RG
Sbjct: 235 ALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGA 294
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P + +Y+ + EE ++ E +L M +G P IY + +
Sbjct: 295 IPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVS 354
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG-GLSTGEPAYTSLMNA 267
+M++ LP Y+ LI LC + + EA ++M + E Y +L++
Sbjct: 355 VINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDG 414
Query: 268 FCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAE 327
C +G+F + + + + + P + TY+ +I G C M R EA+ L M
Sbjct: 415 LCRDGQFLEASQVMEEM------LIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVS 468
Query: 328 MGLSPDAVSYSTVISRFC 345
+ P++ + + C
Sbjct: 469 QDMVPESSVWKALAESVC 486
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 15/277 (5%)
Query: 92 LCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMI----DRG 147
LC R MN +G D+ +Y L+ FC + ++++A +L M +G
Sbjct: 162 LCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKG 221
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT--WGGDQELELD 205
+ Y L+ A C+ V +A IL + +GL Y+ I W E ++
Sbjct: 222 SGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE-GIE 280
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
+ + +G +P D+YS + L E +L E ++ M G Y + +
Sbjct: 281 RVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKV 340
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS-PSLVTYNALIYGHCCMGRFEEALGILRG 324
A C G+ L +A+ + + P++ YN LI G C G+ EA+G L+
Sbjct: 341 KALCRAGK------LKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKK 394
Query: 325 MA-EMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
M+ ++ + +Y T++ C+ G+ A ++M EM
Sbjct: 395 MSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 116/252 (46%), Gaps = 16/252 (6%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPS-------VATYNKLVRAYCEEDRVREAAGIL 175
LI + ++ A ++ +++D G P+ V+ +N L+ A + R +L
Sbjct: 387 LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLL 446
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
M D+GL P +N ++ + E A++ MV+ G P +Y L+ +L
Sbjct: 447 NKMEDKGLKPQRRHWNAVLV-ACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEK 505
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR- 294
+ EAF ++ M++ G+ AYT++ A L G+ + F+L D + L + ++
Sbjct: 506 GKLYDEAFRVWNHMIKVGIEPNLYAYTTM--ASVLTGQ--QKFNLLDTL---LKEMASKG 558
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
PS+VT+NA+I G G A M + P+ ++Y +I +P +AY
Sbjct: 559 IEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAY 618
Query: 355 ELMVEMNEKEIR 366
EL V+ + ++
Sbjct: 619 ELHVKAQNEGLK 630
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 7/177 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M KGL +R + +++ E A ++ M+D G P+V +Y L+ A +
Sbjct: 449 MEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKL 508
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIIT-WGGDQELE-LDTALEFKAKMVEKGILPHADT 225
EA + M G+ P++ Y T+ + G Q+ LDT L+ +M KGI P T
Sbjct: 509 YDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLK---EMASKGIEPSVVT 565
Query: 226 YSWLIVSLCFERRLSE-AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLH 281
++ ++S C LS A++ F M + E Y L+ A + + + LH
Sbjct: 566 FN-AVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELH 621
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA----- 260
TA + A + +KG LP + +I ++RL A + + R +G
Sbjct: 130 TADDVDAVLKDKGELP-LQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLF 188
Query: 261 -YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
Y SL+ A GE K+ + +G +P+ +VTYN L+ + G F +AL
Sbjct: 189 IYNSLLGAMRGFGEAEKILKDMEE-EGIVPN--------IVTYNTLMVIYMEEGEFLKAL 239
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
GIL E G P+ ++YST + + ++ + A E VE+ EK
Sbjct: 240 GILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREK 283
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ D +I + EVD+A +V EM G P+ TY+ LV+ CE+ R
Sbjct: 214 MKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V + G + M +G+ P+ Y +I E LD A+E M+ + P TY+
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLIC-SLSMERRLDEAVEVVYDMLANSLSPDMLTYN 332
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMN 266
++ LC R SEA ++ E + GE Y +LM+
Sbjct: 333 TVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
+M G P N +++AY + V EA + + MA G P+ Y+ ++ G ++
Sbjct: 213 QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVK-GVCEK 271
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
+ L F +M KG++P+ Y LI SL ERRL EA ++ +ML LS Y
Sbjct: 272 GRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTY 331
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
+++ C G S+ + + K P
Sbjct: 332 NTVLTELCRGGRGSEALEMVEEWKKRDP 359
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 58/258 (22%)
Query: 120 YTSLIHMFCHQEEV-DKAYKVLSEMIDRGFS-PSVATY-----------NKLVRAYCEED 166
Y +I C ++ + ++A+ V ++M+ S P + TY NKL Y
Sbjct: 146 YNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLH 205
Query: 167 RVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTY 226
VR + + M G+ PD + N II + LE+D A+ +M G P+A TY
Sbjct: 206 AVR---SLTKQMKSNGVIPDTFVLNMIIK-AYAKCLEVDEAIRVFKEMALYGSEPNAYTY 261
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG 286
S+L+ +C + R+ + ++EM G+ Y L+ + +E
Sbjct: 262 SYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMER-------------- 307
Query: 287 FLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
R +EA+ ++ M LSPD ++Y+TV++ C+
Sbjct: 308 ---------------------------RLDEAVEVVYDMLANSLSPDMLTYNTVLTELCR 340
Query: 347 IGEPGMAYELMVEMNEKE 364
G A E++ E +++
Sbjct: 341 GGRGSEALEMVEEWKKRD 358
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 113/249 (45%), Gaps = 13/249 (5%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y ++ + ++ ++V EM R + TY L+ Y +V EA G+
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 180 DRGLSPDVDIYNTIITW-GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+ G+ D+ ++ ++ W + +E L F ++ E G A + ++ C
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETL-FCSRRREFGCDIKA--MNMILNGWCVLGN 262
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
+ EA +++++ +Y +++NA +G+ K L+ A+ + TR +P
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAM------WDTRRNPD 316
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
+ N +I C R EAL + R ++E G P+ V+Y++++ CKI +EL+
Sbjct: 317 VKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVE 376
Query: 359 EMNEKEIRG 367
EM E++G
Sbjct: 377 EM---ELKG 382
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 12/256 (4%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
R+ D + +++ +C V +A + ++I P V +Y ++ A ++ ++
Sbjct: 240 RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLG 299
Query: 170 EAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
+A + R M D +PDV I N +I ++ + ALE ++ EKG P+ TY+ L
Sbjct: 300 KAMELYRAMWDTRRNPDVKICNNVIDALCFKK-RIPEALEVFREISEKGPDPNVVTYNSL 358
Query: 230 IVSLCFERRLSEAFDLFREM-LRGG-LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
+ LC RR + ++L EM L+GG S + ++ L+ ++S+ D +
Sbjct: 359 LKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL-------KYSQRSKDVDIVLER 411
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
+ + L YN + + + E+ I M GL PD +Y+ I
Sbjct: 412 MAKNKCEMTSDL--YNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTK 469
Query: 348 GEPGMAYELMVEMNEK 363
G+ G A EM K
Sbjct: 470 GKIGEALSYFQEMMSK 485
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 19/260 (7%)
Query: 89 IQDLCGK-GRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRG 147
I D+ GK R M+++ ++++TY L++ + +VD+A V + G
Sbjct: 149 ILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFG 208
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT-W---GGDQELE 203
+ ++ L+ C V E A L R D+ N I+ W G E
Sbjct: 209 IDDDLVAFHGLLMWLCRYKHV-EFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHE-- 265
Query: 204 LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTS 263
A F ++ P +Y +I +L + +L +A +L+R M + +
Sbjct: 266 ---AKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 264 LMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILR 323
+++A C + + + I PD P++VTYN+L+ C + R E+ ++
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPD------PNVVTYNSLLKHLCKIRRTEKVWELVE 376
Query: 324 GMAEMG--LSPDAVSYSTVI 341
M G SP+ V++S ++
Sbjct: 377 EMELKGGSCSPNDVTFSYLL 396
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 88 TIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRG 147
I LC K R+ ++ KG + TY SL+ C +K ++++ EM +G
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 148 --FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTI----ITWGGDQE 201
SP+ T++ L++ Y + R ++ +L MA D+YN + + W +++
Sbjct: 383 GSCSPNDVTFSYLLK-YSQ--RSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 202 LELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
+ E ++M G+ P TY+ I L + ++ EA F+EM+ G+ EP
Sbjct: 440 VR-----EIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM-VPEPRT 493
Query: 262 TSLMN 266
L+N
Sbjct: 494 EMLLN 498
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 18/223 (8%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D +Y ++I+ + ++ KA ++ M D +P V N ++ A C + R+ EA +
Sbjct: 281 DVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVF 340
Query: 176 RVMADRGLSPDVDIYNTIITW-----GGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
R ++++G P+V YN+++ ++ EL +E K P+ T+S+L
Sbjct: 341 REISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCS----PNDVTFSYL- 395
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
L + +R + + M + Y + + + KV + ++
Sbjct: 396 --LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMER---- 449
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPD 333
+ P TY I+G G+ EAL + M G+ P+
Sbjct: 450 --SGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 143 MIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL 202
M +G P V TYN L+ YC++ + +A ++ M + +PDV Y T+I GG +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVI--GGLGLI 294
Query: 203 -ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAY 261
+ D A E +M E G P Y+ I + C RRL +A L EM++ GLS Y
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 262 TSLMNAFCLEGEFSKVFHLH 281
L + + + L+
Sbjct: 355 NLFFRVLSLANDLGRSWELY 374
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 13/236 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAY---CE 164
M KGL D TY SLI ++C E++KAYK++ +M + +P V TY ++ +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 165 EDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHAD 224
D+ RE +L+ M + G PDV YN I L A + +MV+KG+ P+A
Sbjct: 297 PDKARE---VLKEMKEYGCYPDVAAYNAAIR-NFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI 284
TY+ L L +++L+ ML G + + L F + + A+
Sbjct: 353 TYNLFFRVLSLANDLGRSWELYVRML------GNECLPNTQSCMFLIKMFKRHEKVDMAM 406
Query: 285 KGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
+ + V F + + L+ C + + EEA L M E G P VS+ +
Sbjct: 407 RLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
+ LC R+ E+F F+ ++ T + +L+ C E + +++ ++K
Sbjct: 154 VAKLCSVRQTVESFWKFKRLVPDFFDTA--CFNALLRTLCQEKSMTDARNVYHSLKH--- 208
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
+F P L T+N L+ G E ++G GL PD V+Y+++I +CK E
Sbjct: 209 ----QFQPDLQTFNILLSGWKSSEEAEAFFEEMKGK---GLKPDVVTYNSLIDVYCKDRE 261
Query: 350 PGMAYELMVEMNEKE 364
AY+L+ +M E+E
Sbjct: 262 IEKAYKLIDKMREEE 276
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 117/290 (40%), Gaps = 10/290 (3%)
Query: 60 RTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGK--GRMXXXXXXXXXMNRKGLALDQ 117
R KD+ + ++ ++ ++G+ NAT T C + G M+ G D
Sbjct: 186 RKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDN 245
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
T ++I + VD A + + T++ L+R Y I
Sbjct: 246 VTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEE 305
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M G+ P++ IYN +I G + + +K ++ G P+ TY+ L+ + R
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYK-DLITNGFTPNWSTYAALVRAYGRAR 364
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEF-SKVFHLHDAIKGFLPDFVTRFS 296
+A ++REM GLS Y +L+ + C + + + F + +K
Sbjct: 365 YGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKN-----CETCD 418
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
P T+++LI + C GR EA L M E G P ++VI + K
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGK 468
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 4/186 (2%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M G+ + Y LI + +A + ++I GF+P+ +TY LVRAY
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARY 365
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVE-KGILPHADTY 226
+A I R M ++GLS V +YNT+++ D +D A E M + P + T+
Sbjct: 366 GDDALAIYREMKEKGLSLTVILYNTLLSMCADNRY-VDEAFEIFQDMKNCETCDPDSWTF 424
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI-- 284
S LI R+SEA +M G TS++ + + V D +
Sbjct: 425 SSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLE 484
Query: 285 KGFLPD 290
G PD
Sbjct: 485 LGITPD 490
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 15/249 (6%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y + +F ++++K+ K+ EM++RG P AT+ ++ + + A M+
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 180 DRGLSPD-VDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
G PD V + I +G +++ +L +A+ + I A T+S LI
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRI--DAVTFSTLIRIYGVSGN 295
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSP 297
+++ EM G+ Y L+++ G + + K D +T F+P
Sbjct: 296 YDGCLNIYEEMKALGVKPNLVIYNRLIDSM---GRAKRPWQ----AKIIYKDLITNGFTP 348
Query: 298 SLVTYNALI--YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
+ TY AL+ YG G ++AL I R M E GLS + Y+T++S A+E
Sbjct: 349 NWSTYAALVRAYGRARYG--DDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFE 406
Query: 356 LMVEMNEKE 364
+ +M E
Sbjct: 407 IFQDMKNCE 415
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 36/247 (14%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMI---DRGFSPSVATYNKLVRA--------YCE 164
++ Y S+I F ++ +A + M+ + P++ TY+ L +A Y
Sbjct: 206 NENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 165 EDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKM-VEKGILPHA 223
+ + R M D G+ PDV N ++ G L ++ AL +M V P++
Sbjct: 266 HVYMETVRSLFRQMVDSGIEPDVFALNCLVK-GYVLSLHVNDALRIFHQMSVVYDCEPNS 324
Query: 224 DTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA 283
TY +LI LC + R A +L EM G +Y SL+NAF L GE + DA
Sbjct: 325 FTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGE------IDDA 378
Query: 284 IK--------GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAV 335
+K G + DF ++Y L+ C G+++EA +L + E L D
Sbjct: 379 VKCLWEMIENGRVVDF--------ISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRD 429
Query: 336 SYSTVIS 342
SY +++
Sbjct: 430 SYDKLVN 436
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 82 SFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLS 141
SF I LC +GR M KG + ++Y SL++ F E+D A K L
Sbjct: 324 SFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLW 383
Query: 142 EMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
EMI+ G +Y LV C + + EA +L ++ ++ L D D Y+ ++
Sbjct: 384 EMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLV 435
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 245 LFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP-DFVTRFSPSLVTYN 303
LFR+M+ G+ EP +L CL + H++DA++ F V P+ TY+
Sbjct: 275 LFRQMVDSGI---EPDVFALN---CLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYD 328
Query: 304 ALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
LI+G C GR A +L M G P+ SY+++++ F GE A + + EM E
Sbjct: 329 YLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIE 387
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 7/228 (3%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TYT+L++ F + +KA ++ ++ + G P V YN L+ +Y AA I +M
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
G PD YN ++ G L D F+ +M GI P ++ L+ + R
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE-EMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
+++ + +EM G+ S++N + G+F+K+ + ++ +
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN------GPCTAD 473
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ TYN LI + G E + + E PD V++++ I + +
Sbjct: 474 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 521
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 13/258 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
+ + D + LI + + + +A + ++++ + P+ TY L++AYC
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 168 VREAAGILRVMADRGLSPD---VDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHAD 224
+ A +L M + +SP V +YN I ++ + A++ +M P +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI 284
TY+ +I + ++ L+ EM YT+L+NAF EG K + + +
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 285 K--GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
+ G PD + YNAL+ + G A I M MG PD SY+ ++
Sbjct: 326 QEDGLEPD--------VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 377
Query: 343 RFCKIGEPGMAYELMVEM 360
+ + G A + EM
Sbjct: 378 AYGRAGLHSDAEAVFEEM 395
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 114/272 (41%), Gaps = 7/272 (2%)
Query: 95 KGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVAT 154
KG M R TY +I+++ + ++K+ EM P++ T
Sbjct: 242 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 301
Query: 155 YNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKM 214
Y LV A+ E +A I + + GL PDV +YN ++ A E + M
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA-EIFSLM 360
Query: 215 VEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEF 274
G P +Y+ ++ + S+A +F EM R G++ ++ L++A+ +
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 275 SKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDA 334
+K +AI + + P N+++ + +G+F + IL M + D
Sbjct: 421 TKC----EAIVKEMSE--NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 474
Query: 335 VSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+Y+ +I+ + K G EL VE+ EK R
Sbjct: 475 STYNILINIYGKAGFLERIEELFVELKEKNFR 506
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 17/256 (6%)
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS---VATYNKLVRAYCE-EDRVREAA 172
+ TY LI +C +++A VL EM + SP V YN + + + EA
Sbjct: 190 EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 249
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
+ + M P + YN +I G + + +M P+ TY+ L+ +
Sbjct: 250 DVFQRMKRDRCKPTTETYNLMINLYGKASKSY-MSWKLYCEMRSHQCKPNICTYTALVNA 308
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE---FSKVFHLHDAIKGFLP 289
E +A ++F ++ GL Y +LM ++ G +++F L + G P
Sbjct: 309 FAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM-GCEP 367
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
D +YN ++ + G +A + M +G++P S+ ++S + K +
Sbjct: 368 D--------RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 350 PGMAYELMVEMNEKEI 365
++ EM+E +
Sbjct: 420 VTKCEAIVKEMSENGV 435
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 7/228 (3%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TYT+L++ F + +KA ++ ++ + G P V YN L+ +Y AA I +M
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
G PD YN ++ G L D F+ +M GI P ++ L+ + R
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE-EMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPS 298
+++ + +EM G+ S++N + G+F+K+ + ++ +
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN------GPCTAD 495
Query: 299 LVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
+ TYN LI + G E + + E PD V++++ I + +
Sbjct: 496 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 543
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 114/272 (41%), Gaps = 7/272 (2%)
Query: 95 KGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVAT 154
KG M R TY +I+++ + ++K+ EM P++ T
Sbjct: 264 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 323
Query: 155 YNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKM 214
Y LV A+ E +A I + + GL PDV +YN ++ A E + M
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAA-EIFSLM 382
Query: 215 VEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEF 274
G P +Y+ ++ + S+A +F EM R G++ ++ L++A+ +
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Query: 275 SKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDA 334
+K +AI + + P N+++ + +G+F + IL M + D
Sbjct: 443 TKC----EAIVKEMSE--NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 496
Query: 335 VSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
+Y+ +I+ + K G EL VE+ EK R
Sbjct: 497 STYNILINIYGKAGFLERIEELFVELKEKNFR 528
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 13/258 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
+ + D + LI + + + +A + ++++ + P+ TY L++AYC
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 168 VREAAGILRVMADRGLSPD---VDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHAD 224
+ A +L M + +SP V +YN I ++ + A++ +M P +
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI 284
TY+ +I + ++ L+ EM YT+L+NAF EG K + + +
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 285 K--GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
+ G PD + YNAL+ + G A I M MG PD SY+ ++
Sbjct: 348 QEDGLEPD--------VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 399
Query: 343 RFCKIGEPGMAYELMVEM 360
+ + G A + EM
Sbjct: 400 AYGRAGLHSDAEAVFEEM 417
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 17/256 (6%)
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPS---VATYNKLVRAYCE-EDRVREAA 172
+ TY LI +C +++A VL EM + SP V YN + + + EA
Sbjct: 212 EDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 271
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
+ + M P + YN +I G + + +M P+ TY+ L+ +
Sbjct: 272 DVFQRMKRDRCKPTTETYNLMINLYGKASKSY-MSWKLYCEMRSHQCKPNICTYTALVNA 330
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE---FSKVFHLHDAIKGFLP 289
E +A ++F ++ GL Y +LM ++ G +++F L + G P
Sbjct: 331 FAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM-GCEP 389
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
D +YN ++ + G +A + M +G++P S+ ++S + K +
Sbjct: 390 D--------RASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 350 PGMAYELMVEMNEKEI 365
++ EM+E +
Sbjct: 442 VTKCEAIVKEMSENGV 457
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 108/244 (44%), Gaps = 8/244 (3%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR- 181
+I+++ + A KV EM +R + ++N L+ A + GI + + +
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
+ PDV YNT+I G + A+ ++ KG+ P T++ L+ + + E
Sbjct: 172 SIEPDVASYNTLIK-GLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEE 230
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVT 301
++ M+ + +Y + + +E + ++ L D +KG P + T
Sbjct: 231 GEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKG------NELKPDVFT 284
Query: 302 YNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN 361
+ A+I G G+ +EA+ + + + G P +++++ CK G+ AYEL E+
Sbjct: 285 FTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIF 344
Query: 362 EKEI 365
K +
Sbjct: 345 AKRL 348
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I+ LCGKG + KGL D T+ L+H + + ++ ++ + M+++
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNV 243
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
+ +YN + E++ E + + L PDV + +I G E +LD A+
Sbjct: 244 KRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK-GFVSEGKLDEAI 302
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
+ ++ + G P ++ L+ ++C L A++L +E+ L E +++A
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDA 361
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 14/251 (5%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL--- 175
T++ L+ FC Q ++D+A L ++ + + LV A C + + +EA +L
Sbjct: 253 THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEI 312
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVE-KGILPHADTYSWLIVSLC 234
+++ + +I+ + G L+ +F K+ +G Y+ ++ L
Sbjct: 313 KLVGTVNMDRAYNIWIRALIKAG----FLNNPADFLQKISPLEGCELEVFRYNSMVFQLL 368
Query: 235 FERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
E L +D+ EM+ G+S P ++ A C F K + +A++ +
Sbjct: 369 KENNLDGVYDILTEMMVRGVS---PNKKTMNAALCF---FCKAGFVDEALELYRSRSEIG 422
Query: 295 FSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
F+P+ ++YN LI+ C E+A +L+G + G ++ST+ + C G+P MA
Sbjct: 423 FAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAR 482
Query: 355 ELMVEMNEKEI 365
EL++ E+++
Sbjct: 483 ELVIAAAERDL 493
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 9/238 (3%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
+G L+ Y S++ + +D Y +L+EM+ RG SP+ T N + +C+ V E
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410
Query: 171 AAGILRVMADRGLSPDVDIYNTII-TWGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
A + R ++ G +P YN +I T ++ +E A + +++G T+S L
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVE--QAYDVLKGAIDRGHFLGGKTFSTL 468
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
+LC++ + A +L L A +++A C G+ +++
Sbjct: 469 TNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNK--- 525
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
+ S + +LIYG + R + A ++ M E G +P Y VI C++
Sbjct: 526 ---SGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEM 580
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 12/230 (5%)
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD-R 181
L+ C + + +A K+L E+ G YN +RA + + A L+ ++
Sbjct: 292 LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLE 351
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
G +V YN+++ + +E LD + +M+ +G+ P+ T + + C + E
Sbjct: 352 GCELEVFRYNSMV-FQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP--DFVTRFSPSL 299
A +L+R G + +Y L++ C V +D +KG + F+ + S
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCAN---ESVEQAYDVLKGAIDRGHFLGGKTFST 467
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
+T NAL C G+ + A ++ AE L P ++ +IS C +G+
Sbjct: 468 LT-NAL----CWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGK 512
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 93/242 (38%), Gaps = 9/242 (3%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I LC G++ N+ G+ + +TSLI+ D A K++ M ++G+
Sbjct: 504 ISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGY 563
Query: 149 SPSVATYNKLVRAYCE-EDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTA 207
+P+ + Y +++ CE E + L V YN I G
Sbjct: 564 TPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLAR 623
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
L + M GI P + ++ S ++++A F ++ G T + Y ++
Sbjct: 624 LVYDM-MDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVG 681
Query: 268 FCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAE 327
C + H + +KG PS+ Y I C +++EA+G++ +
Sbjct: 682 LCKANKLDDAMHFLEEMKG------EGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRK 735
Query: 328 MG 329
G
Sbjct: 736 SG 737
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 12/234 (5%)
Query: 90 QDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFS 149
+ L GR M G D TY+ L+ C + +++A VL +M +G
Sbjct: 378 RSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCF 437
Query: 150 PSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALE 209
P + T+ L++ +C+ + + +A M ++G D ++ + +I G + + A
Sbjct: 438 PDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLID-GFVIHNKFEGASI 496
Query: 210 FKAKMVEKG-ILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
F +MV+ + P TY LI L ++ EA DL + M + PAY A
Sbjct: 497 FLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNY----PAY-----AE 547
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+G +K L DA K FL ++ SPS Y +I GR +A +L
Sbjct: 548 AFDGYLAKFGTLEDA-KKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 84/218 (38%), Gaps = 9/218 (4%)
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTA 207
+ S TYN +R + V E ++ M G D+D Y + + +T
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAET- 317
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERR--LSEAFDLFREMLRGGLSTGEPAYTSLM 265
++ M++ P S L+ L L F + R+ G S + Y +
Sbjct: 318 VKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIH 377
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+ G F + + A++ + P +TY+ L++G C R EEA G+L M
Sbjct: 378 RSLTSVGRFDEAEEITKAMRN------AGYEPDNITYSQLVFGLCKAKRLEEARGVLDQM 431
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
G PD +++ +I CK E A M EK
Sbjct: 432 EAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEK 469
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 10/215 (4%)
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
++D ++V + G S S A Y+ + R+ R EA I + M + G PD Y+
Sbjct: 350 DLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYS 409
Query: 192 TIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR 251
++ +G + L+ A +M +G P T++ LI C L +A F ML
Sbjct: 410 QLV-FGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLE 468
Query: 252 GGLSTGEPAYTSLMNAFCLEGEF--SKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
G L++ F + +F + +F L + +K P TY LI
Sbjct: 469 KGFDIDSNLLDVLIDGFVIHNKFEGASIF-LMEMVKN------ANVKPWQSTYKLLIDKL 521
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRF 344
+ + EEAL +L+ M + A ++ +++F
Sbjct: 522 LKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKF 556
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 13/187 (6%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ D TY +I + C +Y +++EM + P+ A++ ++ + +E++ E
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGIL-----PHADTY 226
++R+M + G+ V YN +I ++ + AK + G++ P++ TY
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAE------AKALIDGVMSCRMRPNSVTY 290
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL--HDAI 284
S LI C E L EA +LF M+ G Y +L++ C G+F L
Sbjct: 291 SLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESME 350
Query: 285 KGFLPDF 291
K ++P F
Sbjct: 351 KNWVPSF 357
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 7/182 (3%)
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
G+ PD++ YN +I + ++ A+M K I P A ++ +I E + E
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTS-SSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDE 235
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVT 301
+ R M G+ G Y ++ C + ++ L D + R P+ VT
Sbjct: 236 VRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMS------CRMRPNSVT 289
Query: 302 YNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN 361
Y+ LI+G C +EA+ + M G PD+ Y T+I CK G+ A L E
Sbjct: 290 YSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESM 349
Query: 362 EK 363
EK
Sbjct: 350 EK 351
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M+ G+ + TY +I C +++ +A ++ ++ P+ TY+ L+ +C E+
Sbjct: 243 MDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEEN 302
Query: 168 VREAAGILRVMADRGLSPDVDIYNTII---TWGGDQELELDTALEFKAKMVEKGILPHAD 224
+ EA + VM G PD + Y T+I GGD +TAL + +EK +P
Sbjct: 303 LDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGD----FETALILCRESMEKNWVPSFS 358
Query: 225 TYSWLIVSLCFERRLSEAFDL 245
WL+ L ++ EA +L
Sbjct: 359 VMKWLVNGLASRSKVDEAKEL 379
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 45/229 (19%)
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELD 205
+GF TY ++ + E R++ + +M ++G+ D Y ++I W ++D
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSG-DVD 174
Query: 206 TALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLM 265
A+ +M + G P +Y+ + L + R+ EA ++++EMLR
Sbjct: 175 GAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLR-------------- 220
Query: 266 NAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGM 325
+R SP+ TY L+ G+ EEAL I M
Sbjct: 221 ---------------------------SRVSPNCHTYTVLMEYLVATGKCEEALDIFFKM 253
Query: 326 AEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIRGVLMKSCI 374
E+G+ PD + + +I++ K GE ++V M E GV+++ I
Sbjct: 254 QEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKEN---GVVLRYPI 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 77 QKGLVSFNATATIQ-------------DLCGK-GRMXXXXXXXXXMNRKGLALDQRTYTS 122
QK + FN A I+ D+ G+ GR+ M KG+ +D TYTS
Sbjct: 103 QKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTS 162
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
LIH +VD A ++ EM D G P+V +Y ++ + RV EA + + M
Sbjct: 163 LIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSR 222
Query: 183 LSPDVDIYNTIITW----GGDQELELDTALEFKAKMVEKGILP 221
+SP+ Y ++ + G +E AL+ KM E G+ P
Sbjct: 223 VSPNCHTYTVLMEYLVATGKCEE-----ALDIFFKMQEIGVQP 260
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 3/166 (1%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
KG D TYT+++ +F + Y V M ++G TY L+ V
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 171 AAGILRVMADRGLSPDVDIYNTIIT-WGGDQELELDTALEFKAKMVEKGILPHADTYSWL 229
A + M D G P V Y + D +E A E +M+ + P+ TY+ L
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVE--EATEVYKEMLRSRVSPNCHTYTVL 233
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFS 275
+ L + EA D+F +M G+ + A L+ GE S
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETS 279
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY SL+ FC ++ A K+L M+ RG P+ TYN + + + ++ E + +
Sbjct: 357 TYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKL 416
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+ G SPD Y+ I+ ++ +L A++ +M +GI P T + LI LC
Sbjct: 417 IEAGHSPDRLTYHLILKMLC-EDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEM 475
Query: 239 LSEAFDLFREMLRGGL 254
L EAF+ F +R G+
Sbjct: 476 LEEAFEEFDNAVRRGI 491
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 86/212 (40%), Gaps = 38/212 (17%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEM-------------------------------IDRG 147
TY +LI +C V A +VL EM ++R
Sbjct: 287 TYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERF 346
Query: 148 F----SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELE 203
F P++ TYN LV+ +C+ + A+ IL++M RG+ P YN + +
Sbjct: 347 FVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHN-K 405
Query: 204 LDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTS 263
+ + K++E G P TY ++ LC + +LS A + +EM G+ T
Sbjct: 406 TEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTM 465
Query: 264 LMNAFCLEGEFSKVFHLHDAI--KGFLPDFVT 293
L++ C + F D +G +P ++T
Sbjct: 466 LIHLLCRLEMLEEAFEEFDNAVRRGIIPQYIT 497
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 14/254 (5%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
R + L++ + ++ +A K+ EM P+V TY L+ YC RV+ A +L
Sbjct: 251 RIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEE 310
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAK--MVEKGILPHADTYSWLIVSLCF 235
M + + ++N II G+ L AL + + E G P TY+ L+ + C
Sbjct: 311 MKMAEMEINFMVFNPIIDGLGEAG-RLSEALGMMERFFVCESG--PTIVTYNSLVKNFCK 367
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
L A + + M+ G+ +P T+ + F FSK + + +
Sbjct: 368 AGDLPGASKILKMMMTRGV---DPTTTTYNHFF---KYFSKHNKTEEGMNLYFKLIEAGH 421
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
SP +TY+ ++ C G+ A+ + + M G+ PD ++ + +I C++ M E
Sbjct: 422 SPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRL---EMLEE 478
Query: 356 LMVEMNEKEIRGVL 369
E + RG++
Sbjct: 479 AFEEFDNAVRRGII 492
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 80 LVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
+V++N+ +++ C G + M +G+ TY F + ++ +
Sbjct: 355 IVTYNSL--VKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGD 199
++I+ G SP TY+ +++ CE+ ++ A + + M +RG+ PD+ +I
Sbjct: 413 YFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCR 472
Query: 200 QELELDTALEFKAKMVEKGILPHADTYSWL 229
E+ L+ A E V +GI+P T+ +
Sbjct: 473 LEM-LEEAFEEFDNAVRRGIIPQYITFKMI 501
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNA 267
+E +M ++G++ + TY+ LI L A ++F+EM+ G+ Y L++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 268 FCLEGEFSKVF---HLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRG 324
C G+ K + D F + P++VTY +I G C G EEA + R
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
M E G PD+ +Y+T+I + G+ + EL+ EM
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M+++GL + TYT+LI + D A ++ EM+ G P + TYN L+ C+ +
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 168 VREAAGILRV---------MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKG 218
+ +A +V ++ +G+ P+V Y T+I+ + + + F+ KM E G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR-KMKEDG 125
Query: 219 ILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF 278
LP + TY+ LI + + + + +L +EM R G+ + L+ +G K F
Sbjct: 126 PLPDSGTYNTLIRAHLRDGDKAASAELIKEM-RSCRFAGDASTYGLVTDMLHDGRLDKGF 184
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 70 EVAEKTNQKGLVSFNATAT--IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
E+ + +Q+GLV T T IQ L G M G+ D TY L+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 128 CHQEEVDKA---------YKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
C +++KA + + + +G P+V TY ++ +C++ EA + R M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 179 ADRGLSPDVDIYNTII 194
+ G PD YNT+I
Sbjct: 122 KEDGPLPDSGTYNTLI 137
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 10/145 (6%)
Query: 138 KVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWG 197
++ EM RG + TY L++ + A I + M G+ PD+ YN ++ G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLD-G 60
Query: 198 GDQELELDTAL---------EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFRE 248
+ +L+ AL + + KG+ P+ TY+ +I C + EA+ LFR+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 249 MLRGGLSTGEPAYTSLMNAFCLEGE 273
M G Y +L+ A +G+
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGD 145
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 13/245 (5%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID-RGFSPSVATYNKLVRAYCEED 166
M +GL YTSLI ++ E +DKA+ L M P V T+ L+ C+
Sbjct: 170 MLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLG 229
Query: 167 RVREAAGILRVMADRGLSPDVDIYNTIITWGGDQEL--ELDTALEFKAKMVEKG-ILPHA 223
R I+ M+ G+ YNTII G + E+++ L A M+E G LP
Sbjct: 230 RFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL---ADMIEDGDSLPDV 286
Query: 224 DTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA 283
T + +I S R + + + G+ + L+ +F G + K+ + D
Sbjct: 287 CTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDF 346
Query: 284 IKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
++ FS + VTYN +I GR E+ + R M G+ P++++Y ++++
Sbjct: 347 MEKRF------FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNA 400
Query: 344 FCKIG 348
+ K G
Sbjct: 401 YSKAG 405
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 12/286 (4%)
Query: 83 FNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSE 142
F T I C GR M+ G+ TY ++I + ++ VL++
Sbjct: 216 FTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLAD 275
Query: 143 MIDRGFS-PSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQE 201
MI+ G S P V T N ++ +Y +R+ G+ PD+ +N +I G
Sbjct: 276 MIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAG 335
Query: 202 L--ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
+ ++ + ++F M ++ TY+ +I + R+ + D+FR+M G+
Sbjct: 336 MYKKMCSVMDF---MEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSI 392
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEAL 319
Y SL+NA+ G V + ++ + V +P +N +I + G
Sbjct: 393 TYCSLVNAYSKAG---LVVKIDSVLRQIVNSDVVLDTP---FFNCIINAYGQAGDLATMK 446
Query: 320 GILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+ M E PD ++++T+I + G EL +M +I
Sbjct: 447 ELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDI 492
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 94/234 (40%), Gaps = 36/234 (15%)
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTA 207
+ P TY KL + + +A+ + VM GL P +D+Y ++I+ G EL LD A
Sbjct: 140 YEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSEL-LDKA 198
Query: 208 ---LEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSL 264
LE+ + + P T++ LI C R + EM G+ Y ++
Sbjct: 199 FSTLEYMKSVSD--CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTI 256
Query: 265 MNAFCLEGEFSKVFH-LHDAIK--GFLPDFVT----------------------RF---- 295
++ + G F ++ L D I+ LPD T RF
Sbjct: 257 IDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMG 316
Query: 296 -SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
P + T+N LI G +++ ++ M + S V+Y+ VI F K G
Sbjct: 317 VQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAG 370
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 21/235 (8%)
Query: 147 GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT----WGGDQEL 202
+ PSV Y ++R Y + +++ A M + G PD T++ WG +
Sbjct: 183 SYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAM 242
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
L F + E+ IL Y++++ SL + + DL+ EM+ G+ E YT
Sbjct: 243 -----LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYT 297
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
+++++ +G +A+K F F P VTY+++I G +E+A+G+
Sbjct: 298 LVVSSYAKQG------FKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLY 351
Query: 323 RGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKE------IRGVLMK 371
M G+ P + +T++S + K A L +M + IRG++++
Sbjct: 352 EDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIR 406
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 127/311 (40%), Gaps = 14/311 (4%)
Query: 62 EKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
E G E AEK G V+ + + L +G+ K + LD Y
Sbjct: 721 EDAYGLFMESAEKGCDPGAVTI--SILVNALTNRGKHREAEHISRTCLEKNIELDTVGYN 778
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
+LI ++ A ++ M G S+ TYN ++ Y ++ +A I
Sbjct: 779 TLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRS 838
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
GL D IY +I G + ++ AL ++M +KGI P +Y+ ++V +C RL
Sbjct: 839 GLYLDEKIYTNMIMHYG-KGGKMSEALSLFSEMQKKGIKPGTPSYN-MMVKICATSRLHH 896
Query: 242 AFD-LFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLV 300
D L + M R G T Y +L+ + +F++ +K S
Sbjct: 897 EVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKE--KGIPLSHSHFSS 954
Query: 301 TYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRF--CKIGEPG-MAYELM 357
+AL+ G EEA M+E G+SPD+ T++ + C E G + YE M
Sbjct: 955 LLSALVKA----GMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKM 1010
Query: 358 VEMNEKEIRGV 368
+ + ++ R V
Sbjct: 1011 IRSSVEDDRFV 1021
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 13/247 (5%)
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
S+I + ++ AY + E ++G P T + LV A + REA I R ++
Sbjct: 709 SMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEK 768
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
+ D YNT+I + +L A E +M G+ TY+ +I +L +
Sbjct: 769 NIELDTVGYNTLIK-AMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDK 827
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGFLPDFVTRFSPSL 299
A ++F R GL E YT+++ + G+ S+ L + KG P +PS
Sbjct: 828 AIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPG-----TPS- 881
Query: 300 VTYNALIYGHCCMGRF-EEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMV 358
YN ++ C R E +L+ M G D +Y T+I + + + A + +
Sbjct: 882 --YNMMV-KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTIT 938
Query: 359 EMNEKEI 365
+ EK I
Sbjct: 939 LVKEKGI 945
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 70 EVAEKTNQKGL-VSFNATATIQDLCGKG-RMXXXXXXXXXMNRKGLALDQRTYTSLIHMF 127
E+ E+ + G+ S T+ + G+G ++ R GL LD++ YT++I +
Sbjct: 795 EIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHY 854
Query: 128 CHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV-REAAGILRVMADRGLSPD 186
++ +A + SEM +G P +YN +V+ C R+ E +L+ M G D
Sbjct: 855 GKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKI-CATSRLHHEVDELLQAMERNGRCTD 913
Query: 187 VDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLF 246
+ Y T+I + + A + + EKGI +S L+ +L + EA +
Sbjct: 914 LSTYLTLIQVYAESS-QFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTY 972
Query: 247 REMLRGGLSTGEPAYTSLMNAFCLEGEFSK-VFHLHDAIKGFLPDFVTRFSPSLV 300
+M G+S +++ + G+ K + I+ + D RF S+V
Sbjct: 973 CKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVED--DRFVSSVV 1025
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 8/235 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
+ + G+ +Q Y +I+ +D+ EMI GF+P+ T+N L+ Y + +
Sbjct: 655 IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKA-K 713
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ + L ++A R DV YNTII G + + + K M G + Y+
Sbjct: 714 LFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIK-NMQFDGFSVSLEAYN 772
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L+ + ++++ + + + M + Y ++N + +G +V + +K
Sbjct: 773 TLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKE- 831
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
+ P L +YN LI + G EEA+G+++ M + PD V+Y+ +++
Sbjct: 832 -----SGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 81 VSFNATATIQDLCGKGR-MXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKV 139
VS A T+ D GK + M M + D TY +I+++ Q +D+ V
Sbjct: 766 VSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADV 825
Query: 140 LSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT 195
L E+ + G P + +YN L++AY V EA G+++ M R + PD Y ++T
Sbjct: 826 LKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
V+FN + D+ GK ++ + ++ +D +Y ++I + ++ +
Sbjct: 700 VTFN---VLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAI 756
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
M GFS S+ YN L+ AY ++ ++ + IL+ M PD YN +I G+Q
Sbjct: 757 KNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQ 816
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
+D + ++ E G+ P +Y+ LI + + EA L +EM + +
Sbjct: 817 GW-IDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVT 875
Query: 261 YTSLMNAFCLEGEF 274
YT+L+ A EF
Sbjct: 876 YTNLVTALRRNDEF 889
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 5/177 (2%)
Query: 58 KARTEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGR-MXXXXXXXXXMNRKGLALD 116
KA+ K V + +A++ ++S+N TI GK + M G ++
Sbjct: 711 KAKLFKKVNELFLLAKRHGVVDVISYN---TIIAAYGKNKDYTNMSSAIKNMQFDGFSVS 767
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
Y +L+ + ++++K +L M P TYN ++ Y E+ + E A +L+
Sbjct: 768 LEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLK 827
Query: 177 VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSL 233
+ + GL PD+ YNT+I G + ++ A+ +M + I+P TY+ L+ +L
Sbjct: 828 ELKESGLGPDLCSYNTLIKAYGIGGM-VEEAVGLVKEMRGRNIIPDKVTYTNLVTAL 883
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 101/229 (44%), Gaps = 19/229 (8%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMID-RGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
Y+ ++ + +EE D+A ++ E+ F S +N ++ A ++ V+ A+ +
Sbjct: 176 AYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHM 235
Query: 178 MADRGLSPDVDIYNTII-----TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
M + G+ P+V ++ W ++ EF + K + YS +I
Sbjct: 236 MLEFGVRPNVATIGMLMGLYQKNWNVEEA-------EFAFSHMRKFGIVCESAYSSMITI 288
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
R +A ++ M + + + ++NA+ +G+ L ++I +
Sbjct: 289 YTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKM----ELAESI--LVSMEA 342
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVI 341
FSP+++ YN LI G+ + + E A G+ + +GL PD SY ++I
Sbjct: 343 AGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMI 391
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 108/261 (41%), Gaps = 11/261 (4%)
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
+ Y+S+I ++ DKA +V+ M + + ++ AY ++ ++ A IL
Sbjct: 279 ESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILV 338
Query: 177 VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
M G SP++ YNT+IT G + +++ A ++ G+ P +Y +I
Sbjct: 339 SMEAAGFSPNIIAYNTLIT-GYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRA 397
Query: 237 RRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS 296
EA ++E+ R G +L+N G+ + + G + +
Sbjct: 398 DNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILG 457
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
L Y + G+ + +L+G + + S+S+++ + K GM +
Sbjct: 458 IILQAYEKV-------GKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVK---HGMVDDC 507
Query: 357 MVEMNEKEIRGVLMKSCINHL 377
+ + EK+ R +S + HL
Sbjct: 508 LGLLREKKWRDSAFESHLYHL 528
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 37/270 (13%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M + G + + TYTSLI F VD+A+ VLS++ G +P + N ++ Y R
Sbjct: 273 MIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGR 332
Query: 168 VREAAGILRVMADRGLSPDVDIYNTI---------------ITWGGDQELELDT------ 206
EA + + R L PD + +I IT G + +L T
Sbjct: 333 FEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSN 392
Query: 207 ----------ALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
AL+ + M K TY+ + +LC A +++ +++
Sbjct: 393 CFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHL 452
Query: 257 GEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE 316
+++++++ G+++ HL F + ++ +V+Y I G R E
Sbjct: 453 DAHFHSAIIDSLIELGKYNTAVHL------FKRCILEKYPLDVVSYTVAIKGLVRAKRIE 506
Query: 317 EALGILRGMAEMGLSPDAVSYSTVISRFCK 346
EA + M E G+ P+ +Y T+IS CK
Sbjct: 507 EAYSLCCDMKEGGIYPNRRTYRTIISGLCK 536
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 117/255 (45%), Gaps = 10/255 (3%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G + R + L+ +F DKA +V + M GF P+ N ++ + + V A
Sbjct: 103 GCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGA 162
Query: 172 AGILRVMADRGL-SPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
I + R S D+ + + + GG +L + + K +M+ +G P+ + + ++
Sbjct: 163 LEIFEGIRFRNFFSFDIAL-SHFCSRGGRGDL-VGVKIVLK-RMIGEGFYPNRERFGQIL 219
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
C +SEAF + M+ G+S ++ L++ F GE K L + +
Sbjct: 220 RLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKM------ 273
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
SP+LVTY +LI G +G +EA +L + GL+PD V + +I + ++G
Sbjct: 274 IQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRF 333
Query: 351 GMAYELMVEMNEKEI 365
A ++ + ++++
Sbjct: 334 EEARKVFTSLEKRKL 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 45/245 (18%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+++ ++ L+ F E KA + ++MI G SP++ TY L++ + + V EA
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+L + GL+PD+ + N +I TY+ L
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMI-----------------------------HTYTRL-- 330
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
R EA +F + + L + + S++++ CL G+F V + I DF
Sbjct: 331 -----GRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIG---TDF 382
Query: 292 VTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPG 351
LVT N L +G AL +L M+ + D +Y+ +S C+ G P
Sbjct: 383 ------DLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPR 436
Query: 352 MAYEL 356
A ++
Sbjct: 437 AAIKM 441
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 31/247 (12%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMI-DRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
+Y +I+ C + VD+A +V ++ + F+PS TY L + + R+ +AA +LR
Sbjct: 218 SYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLRE 277
Query: 178 MADRGLSPDVDIYNTIITWGGDQEL-ELDTALEF----KAK-MVEKGILPHADTYSWLIV 231
M +G + D +YN +I G +L + D A+EF K+K V GI+ + +
Sbjct: 278 MLSKGQAADSTVYNNLIR--GYLDLGDFDKAVEFFDELKSKCTVYDGIV------NATFM 329
Query: 232 SLCFER-RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
FE+ EA + +R +L P L+ F G+ + + L + +
Sbjct: 330 EYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEM------ 383
Query: 291 FVTRFSPSLVTYNALIYG---HCC--MGRFEEALGILRGMAEMGLSP----DAVSYSTVI 341
P++++ N+ G + C MG F EA+ + + S D + Y ++
Sbjct: 384 LDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIV 443
Query: 342 SRFCKIG 348
+RFC+ G
Sbjct: 444 TRFCEQG 450
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 203 ELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLR-GGLSTGEPAY 261
+LD A + + V P T + +I ++ +R SE+ LF+ + + +Y
Sbjct: 160 DLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSY 219
Query: 262 TSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGI 321
++NA C EG + ++ I P F+PS VTY L G GR +A +
Sbjct: 220 NQIINAHCDEGNVDEALEVYRHILANAP-----FAPSSVTYRHLTKGLVQAGRIGDAASL 274
Query: 322 LRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
LR M G + D+ Y+ +I + +G+ A E E+ K
Sbjct: 275 LREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 111 KGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE 170
K +D Y +++ FC Q + +A + +E + R ++ ++ AY + +R+ +
Sbjct: 430 KPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDD 489
Query: 171 AAGILRVMADRGLSPDVD----IYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTY 226
A +L M D L D ++ +I G +L + E KM E+ P Y
Sbjct: 490 AVKMLDRMVDVNLRVVADFGARVFGELIKNG-----KLTESAEVLTKMGEREPKPDPSIY 544
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
++ LC L +A D+ EM+R + T+++ F +E
Sbjct: 545 DVVVRGLCDGDALDQAKDIVGEMIRHNV-----GVTTVLREFIIE 584
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 49/257 (19%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
+T +I F +E A + EM+ G P+ T++ +VR+ AG+
Sbjct: 92 WTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRS---------CAGL----- 137
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTAL--------EFKAKMVEKGILPHADTYSW--L 229
R +S ++ ++I G + + ++L +FK L +ADT SW +
Sbjct: 138 -RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMM 196
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG-EFSKVFHLHDAIKGF- 287
I SL R+ EA + EM++ G+ E + L+ A G EF K H + ++G
Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIP 256
Query: 288 --------LPDFVTRFSP--------------SLVTYNALIYGHCCMGRFEEALGILRGM 325
L DF ++FS + + +++ G R +EA+G M
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 326 AEMGLSPDAVSYSTVIS 342
+GL P+ +YS ++S
Sbjct: 317 RSLGLQPNNFTYSAILS 333
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 117/257 (45%), Gaps = 9/257 (3%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
Y++LI + + KA + S + G +P + YN ++ Y + REA +++ M
Sbjct: 228 YSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMN 287
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
+ G+ P+ Y+T+++ + L+ AL A+M E T + +I +
Sbjct: 288 EAGVLPNTVSYSTLLSVYVENHKFLE-ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMV 346
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
EA LF + + + +Y +++ + F + HL ++ ++
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR------KDIEQNV 400
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
VTYN +I + E+A +++ M G+ P+A++YST+IS + K G+ A L +
Sbjct: 401 VTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQK 460
Query: 360 MNEK--EIRGVLMKSCI 374
+ EI VL ++ I
Sbjct: 461 LRSSGVEIDQVLYQTMI 477
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 48/218 (22%)
Query: 148 FSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTA 207
++PSV YN ++R + A G+ M R L+PD Y+T+IT G + + D+A
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGM-FDSA 209
Query: 208 LEFKAKMVEKGILPHADTYSWLIVSLCFERRL---SEAFDLFREMLRGGLSTGEPAYTSL 264
L + KM + + YS LI RRL S+A +F + R G++ AY S+
Sbjct: 210 LSWLQKMEQDRVSGDLVLYSNLI---ELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSM 266
Query: 265 MNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRG 324
+N +YG + F EA +++
Sbjct: 267 IN---------------------------------------VYGKAKL--FREARLLIKE 285
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
M E G+ P+ VSYST++S + + + A + EM E
Sbjct: 286 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE 323
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 113/283 (39%), Gaps = 48/283 (16%)
Query: 80 LVSFNATATIQDLCGKGRM-XXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYK 138
LV++N+ + GK ++ MN G+ + +Y++L+ ++ + +A
Sbjct: 260 LVAYNSMINV---YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 316
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGG 198
V +EM + + + T N ++ Y + D V+EA + + + P+V YNTI+ G
Sbjct: 317 VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 376
Query: 199 DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE 258
+ EL EA LFR M R +
Sbjct: 377 EAEL------------------------------------FGEAIHLFRLMQRKDIEQNV 400
Query: 259 PAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR-FSPSLVTYNALIYGHCCMGRFEE 317
Y +++ + E H+ + + +R P+ +TY+ +I G+ +
Sbjct: 401 VTYNTMIKIYGKTME-------HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 318 ALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
A + + + G+ D V Y T+I + ++G G A L+ E+
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 16/234 (6%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M RK + + TY ++I ++ E +KA ++ EM RG P+ TY+ ++ + + +
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 450
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ AA + + + G+ D +Y T+I E + +++ + LP
Sbjct: 451 LDRAATLFQKLRSSGVEIDQVLYQTMIV-----AYERVGLMGHAKRLLHELKLPDNIPRE 505
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK-- 285
I L R EA +FR+ G + ++N + + V + + ++
Sbjct: 506 TAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTA 565
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG-LSPDAVSYS 338
G+ PD +++ YG FE+A + R M E G + PD V +
Sbjct: 566 GYFPD------SNVIAMVLNAYGK--QREFEKADTVYREMQEEGCVFPDEVHFQ 611
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
Q TY I+ +C E+ +KA + EM+ +GF V Y+ ++ Y + R+ +A ++
Sbjct: 388 QVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMA 447
Query: 177 VMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
M RG P++ IYN++I G + ++L A + +M +LP +Y+ +I +
Sbjct: 448 KMKQRGCKPNIWIYNSLIDMHG-RAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRS 506
Query: 237 RRLSEAFDLFRE--MLRGGL 254
+ L +L++E M RG +
Sbjct: 507 KELERCVELYQEFRMNRGKI 526
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 109/263 (41%), Gaps = 34/263 (12%)
Query: 135 KAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTII 194
+A +VL EM D+G S Y+ L+RA+ E V + + + L D ++ ++
Sbjct: 266 EALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVV 325
Query: 195 TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS-LCFERRLSEAFDLFREMLRGG 253
+E ++T LE A M K L D IV+ +R +EA ++ ++
Sbjct: 326 LMYV-REGNMETTLEVVAAM-RKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 383
Query: 254 LSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGF-------------------LPDFV 292
G+ Y +NA+C +++K L D + KGF L D V
Sbjct: 384 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 443
Query: 293 TRFS--------PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRF 344
+ P++ YN+LI H A I + M + PD VSY+++IS +
Sbjct: 444 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAY 503
Query: 345 CKIGEPGMAYELMVE--MNEKEI 365
+ E EL E MN +I
Sbjct: 504 NRSKELERCVELYQEFRMNRGKI 526
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 7/248 (2%)
Query: 95 KGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVAT 154
+G M M + L + ++++ F Q +A KV + T
Sbjct: 331 EGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVT 390
Query: 155 YNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKM 214
Y + AYC ++ +A + M +G V Y+ I+ G L A+ AKM
Sbjct: 391 YAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTR-RLSDAVRLMAKM 449
Query: 215 VEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEF 274
++G P+ Y+ LI L A +++EM R + + +YTS+++A+ E
Sbjct: 450 KQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKEL 509
Query: 275 SKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDA 334
+ L+ + + R ++ R +E + +L+ M G DA
Sbjct: 510 ERCVELYQEFR------MNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDA 563
Query: 335 VSYSTVIS 342
YS+ ++
Sbjct: 564 RLYSSALN 571
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 118/269 (43%), Gaps = 11/269 (4%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ +D Y +++ + ++A + +M G SP++ Y+ L+ +Y + ++A
Sbjct: 232 GIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA 291
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
++ M GL P+ + T++ L D + E +++ G + Y L+
Sbjct: 292 DELMTEMKSIGLVPNKVMMTTLLKVYIKGGL-FDRSRELLSELESAGYAENEMPYCMLMD 350
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDF 291
L +L EA +F +M G+ + A + +++A C F + K D
Sbjct: 351 GLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEA-------KELSRDS 403
Query: 292 VTRFSP-SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
T + LV N ++ +C G E + +++ M E +SPD ++ +I F K
Sbjct: 404 ETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLH 463
Query: 351 GMAYELMVEMNEK--EIRGVLMKSCINHL 377
+AY+ ++M+ K + L S I HL
Sbjct: 464 LLAYQTTLDMHSKGHRLEEELCSSLIYHL 492
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 30/257 (11%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY+S I F + V KA ++ + D +V N ++ + ++ + M
Sbjct: 134 TYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQM 192
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
GL PDV YNT++ + A+E ++ GI + Y ++ R
Sbjct: 193 KRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGR 252
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK--GFLPDFV---- 292
EA + ++M G S Y+SL+N++ +G++ K L +K G +P+ V
Sbjct: 253 SEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTT 312
Query: 293 -----------------------TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG 329
++ + + Y L+ G G+ EEA I M G
Sbjct: 313 LLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKG 372
Query: 330 LSPDAVSYSTVISRFCK 346
+ D + S +IS C+
Sbjct: 373 VRSDGYANSIMISALCR 389
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 16/252 (6%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D T T++I C + V +A V+ D ++ Y L+ + + V+EA ++
Sbjct: 172 DGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVI 231
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELE------LDTALEFKAKMVEKGILPHADTYSWL 229
+ M G++PD+ +N+++T ++ + + AL +M I P + +Y+ L
Sbjct: 232 QDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNIL 291
Query: 230 IVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--KGF 287
+ L RR+ E+ + +M R G +Y ++ L G F K + D + +GF
Sbjct: 292 LSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 351
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
P+ +F Y LI C + R AL + M + Y +I + CK
Sbjct: 352 RPE--RKF------YYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKG 403
Query: 348 GEPGMAYELMVE 359
G EL E
Sbjct: 404 GNFEKGRELWEE 415
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M ++GLA Y SL+++ ++ D+A K++ ++ + G P TYN ++R CE +
Sbjct: 320 MKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGK 379
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ A +L M LSP VD ++ + + + + LE +M + P +T+
Sbjct: 380 LDVARNVLATMISENLSPTVDTFHAFL-----EAVNFEKTLEVLGQMKISDLGPTEETFL 434
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAI--K 285
++ L ++ A ++ EM R + Y + + G K ++ + K
Sbjct: 435 LILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSK 494
Query: 286 GFL 288
GF+
Sbjct: 495 GFV 497
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 117/261 (44%), Gaps = 14/261 (5%)
Query: 109 NRKGLALDQRTYTSLIHMFCH-QEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
++K +D + +++ +C+ +V +A ++ EM + +P+ +Y+ ++ + +
Sbjct: 250 SKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGN 309
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
+ ++ + M RGL+P +++YN+++ + +E D A++ K+ E+G+ P + TY+
Sbjct: 310 LFDSLRLYDEMKKRGLAPGIEVYNSLV-YVLTREDCFDEAMKLMKKLNEEGLKPDSVTYN 368
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
+I LC +L A ++ M+ LS + + + A F K + +K
Sbjct: 369 SMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMK-- 422
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRF-EEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
++ P+ T+ LI G G+ E AL I M + + Y I
Sbjct: 423 ----ISDLGPTEETF-LLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLS 477
Query: 347 IGEPGMAYELMVEMNEKEIRG 367
G A E+ EM K G
Sbjct: 478 CGWLEKAREIYSEMKSKGFVG 498
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 16/231 (6%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR--GFSPSVATYNKLVRAYCEE 165
M++ G ++ +L++ H + DK ++ E+ R P +Y L+++YC+
Sbjct: 128 MDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDS 187
Query: 166 DRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADT 225
+A I+R M +G+ + TI++ ++ EL+ A +MV+KG
Sbjct: 188 GTPEKAIEIMRQMQGKGMEVTTIAFTTILS-SLYKKGELEVADNLWNEMVKKGCELDNAA 246
Query: 226 YSWLIVSLCFE--RRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA 283
Y+ I+S E R+ E L EM GL +Y LM A+C G + +++
Sbjct: 247 YNVRIMSAQKESPERVKE---LIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEG 303
Query: 284 IKGFLPDFVTRFSPSLVTYNALIYGHCCMGR-FEEALGILRGMAEMGLSPD 333
++G +P+ T+ LI+ H C R +E+ I + M PD
Sbjct: 304 LEG------NNCAPNAATFRTLIF-HLCYSRLYEQGYAIFKKSVYMHKIPD 347
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 226 YSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK 285
YS LI S + A F +M + G ++ +L+NA F KV L D I
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI- 163
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
P + P ++Y LI +C G E+A+ I+R M G+ ++++T++S
Sbjct: 164 ---PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLY 220
Query: 346 KIGEPGMAYELMVEMNEK 363
K GE +A L EM +K
Sbjct: 221 KKGELEVADNLWNEMVKK 238
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I+ C G M KG+ + +T+++ + E++ A + +EM+ +G
Sbjct: 181 IKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGC 240
Query: 149 SPSVATYNKLVRAYCEE--DRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDT 206
A YN + + +E +RV+E ++ M+ GL PD YN ++T ++ + LD
Sbjct: 241 ELDNAAYNVRIMSAQKESPERVKE---LIEEMSSMGLKPDTISYNYLMTAYCERGM-LDE 296
Query: 207 ALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFRE 248
A + + P+A T+ LI LC+ R + + +F++
Sbjct: 297 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKK 338
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 4/186 (2%)
Query: 62 EKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYT 121
EK + +R++ K + ++F T + L KG + M +KG LD Y
Sbjct: 191 EKAIEIMRQMQGKGMEVTTIAF--TTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYN 248
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
I M +E ++ +++ EM G P +YN L+ AYCE + EA + +
Sbjct: 249 VRI-MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGN 307
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
+P+ + T+I L FK K V +P +T L+V L ++ +
Sbjct: 308 NCAPNAATFRTLIFHLCYSRLYEQGYAIFK-KSVYMHKIPDFNTLKHLVVGLVENKKRDD 366
Query: 242 AFDLFR 247
A L R
Sbjct: 367 AKGLIR 372
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 69/165 (41%), Gaps = 10/165 (6%)
Query: 219 ILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVF 278
I P + LI C +L EA L EM RGG G AY +++ C F
Sbjct: 241 IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPF 300
Query: 279 HLHDAIKGFLPDFVTRFSP-SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSY 337
L ++ L + R P + T+N LI C + R EEA+ + M E G PDA +Y
Sbjct: 301 KLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETY 360
Query: 338 STVISRFCKIGEPGMAYELMVEM---------NEKEIRGVLMKSC 373
+I + G E++ +M N+KE G L C
Sbjct: 361 LVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILC 405
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 16/186 (8%)
Query: 108 MNRKGLALDQRTYTSLIHMFCH----------QEEVDKAYKVLSEMIDRGFSPSVATYNK 157
M+R G + + Y ++ C Q EV+K VL EM RG + T+N
Sbjct: 271 MSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEK---VLLEMEFRGVPRNTETFNV 327
Query: 158 LVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT--WGGDQELELDTALEFKAKMV 215
L+ C+ R EA + M + G PD + Y +I + + E D ++ K K
Sbjct: 328 LINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMID-KMKSA 386
Query: 216 EKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFS 275
G L + Y + LC RL A +F+ M G G Y LM C + +
Sbjct: 387 GYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLT 446
Query: 276 KVFHLH 281
+ L+
Sbjct: 447 RANGLY 452
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 22/272 (8%)
Query: 86 TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID 145
T ++ LC KG + + D+ LI +C E++D+A ++ EM
Sbjct: 215 TLVVKKLCEKGHASIAEKMVKNTANE-IFPDENICDLLISGWCIAEKLDEATRLAGEMSR 273
Query: 146 RGFSPSVATYNKLVRAYCEEDRVR-------EAAGILRVMADRGLSPDVDIYNTIITWGG 198
GF YN ++ C+ R + E +L M RG+ + + +N +I
Sbjct: 274 GGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLIN-NL 332
Query: 199 DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE 258
+ + A+ +M E G P A+TY LI SL R+ E ++ +M G
Sbjct: 333 CKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAG----- 387
Query: 259 PAYTSLMNAFCLEGEFSKVF----HLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR 314
Y L+N G F K+ L A+ F P + TY+ L+ C +
Sbjct: 388 --YGELLNKKEYYG-FLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQ 444
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
A G+ + A+ G++ Y V RF K
Sbjct: 445 LTRANGLYKEAAKKGIAVSPKEYR-VDPRFMK 475
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 122/315 (38%), Gaps = 64/315 (20%)
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
+ L TY ++I + ++ +A + M++ G P+ T+N ++ Y ++ E
Sbjct: 294 VCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVT 353
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
+++ M +PD YN +I+ +++ A + +M + G+ P +Y L+ +
Sbjct: 354 SLMKTMKLH-CAPDTRTYNILISLHTKNN-DIERAGAYFKEMKDDGLKPDPVSYRTLLYA 411
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC----LEGEFS--KVFHLH----- 281
+ EA L EM + E ++L + LE +S K FH+
Sbjct: 412 FSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSS 471
Query: 282 -------DAI--KGFLPDFVTRF-------SPSLVTYNALIYGHCCMGRFEEALGILRGM 325
DA +G+L + F +++ YN +I + E+A + M
Sbjct: 472 EGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESM 531
Query: 326 AEMGLSPDAVSYST-----------------------------------VISRFCKIGEP 350
G++PD +Y+T VIS F K+G+
Sbjct: 532 MSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQL 591
Query: 351 GMAYELMVEMNEKEI 365
MA E+ EM E I
Sbjct: 592 NMAEEVYKEMVEYNI 606
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 128/297 (43%), Gaps = 19/297 (6%)
Query: 73 EKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEE 132
+K LV A+A D+ KGR M G D Y ++I F +
Sbjct: 539 DKCTYNTLVQILASA---DMPHKGRCYLEK-----MRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 133 VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT 192
++ A +V EM++ P V Y L+ A+ + V++A + M + G+ + IYN+
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 193 IITWGGDQELELDTALEFKAKMVEK-GILPHADTY-SWLIVSLCFERRL-SEAFDLFREM 249
+I LD A K+++ + D Y S +++L ER + +A +F M
Sbjct: 651 LIKLYTKVGY-LDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM 709
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
+ G E + ++ + G F + + ++ + ++YN+++
Sbjct: 710 KQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREM------KILTDPLSYNSVLGLF 762
Query: 310 CCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
GRF+EA+ + M G+ PD ++ ++ + K+G A + E+ +KEI+
Sbjct: 763 ALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIK 819
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 118/287 (41%), Gaps = 49/287 (17%)
Query: 115 LDQRT---YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLV----------RA 161
+++RT Y +I + + +KA ++ M+ G +P TYN LV +
Sbjct: 500 VNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKG 559
Query: 162 YCEEDRVRE-------------------------AAGILRVMADRGLSPDVDIYNTIITW 196
C +++RE A + + M + + PDV +Y +I
Sbjct: 560 RCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINA 619
Query: 197 GGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLST 256
D + A+ + M E GI ++ Y+ LI L EA ++R++L+ T
Sbjct: 620 FADTG-NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKT 678
Query: 257 GEP-AYTS--LMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMG 313
P YTS ++N + K + D++K R + T+ ++ + G
Sbjct: 679 QYPDVYTSNCMINLYSERSMVRKAEAIFDSMK-------QRGEANEFTFAMMLCMYKKNG 731
Query: 314 RFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
RFEEA I + M EM + D +SY++V+ F G A E EM
Sbjct: 732 RFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEM 778
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 77 QKGLVSFNAT-ATIQDLCGKGRMXXXXXX-XXXMNRKGLALDQRTYTSLIHMFCHQEEVD 134
+KG+ N+T T+ D+ KG + M++ G+ D+ T ++ M+ E
Sbjct: 215 RKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQ 274
Query: 135 KAYKVLSEM------IDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVD 188
KA + + D S TYN ++ Y + +++EA+ + M + G+ P
Sbjct: 275 KAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTV 334
Query: 189 IYNTII-TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFR 247
+NT+I +G + +L T+L K ++ P TY+ LI + A F+
Sbjct: 335 TFNTMIHIYGNNGQLGEVTSL---MKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFK 391
Query: 248 EMLRGGLSTGEPAYTSLMNAFCL 270
EM GL +Y +L+ AF +
Sbjct: 392 EMKDDGLKPDPVSYRTLLYAFSI 414
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 121/307 (39%), Gaps = 44/307 (14%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M GL D +Y +L++ F + V++A +++EM D T + L R Y E +
Sbjct: 393 MKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEM 452
Query: 168 VREAAGILRV------MADRGLSPDVDI---------------------------YNTII 194
+ ++ + M+ G S ++D YN +I
Sbjct: 453 LEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMI 512
Query: 195 TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
G + + A E M+ G+ P TY+ L+ L + +M G
Sbjct: 513 KAYGISK-SCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGY 571
Query: 255 STGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR 314
+ Y +++++F G+ + ++ + + P +V Y LI G
Sbjct: 572 VSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEY------NIEPDVVVYGVLINAFADTGN 625
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG---EPGMAY-ELMVEMNEKEIRGVLM 370
++A+ + M E G+ ++V Y+++I + K+G E Y +L+ N+ + V
Sbjct: 626 VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYT 685
Query: 371 KSCINHL 377
+C+ +L
Sbjct: 686 SNCMINL 692
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 112 GLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREA 171
G+ +D LI C ++ A ++L E + P+V T++ L+R +C + + EA
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 172 AGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIV 231
+L M + PD +N +I+ G ++ ++ ++ +M KG P+ TY ++
Sbjct: 257 FKLLERMEKERIEPDTITFNILIS-GLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLY 315
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC 269
L ++R EA ++ +M+ G+ +Y ++ C
Sbjct: 316 GLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLC 353
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I+ LC G + ++ + T++ LI FC++ + ++A+K+L M
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI 268
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
P T+N L+ ++ RV E +L M +G P+ Y ++ D++ L+ A
Sbjct: 269 EPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE-AK 327
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
E ++M+ G+ P +Y +++ LC + + E + R+M+ G
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 99/229 (43%), Gaps = 9/229 (3%)
Query: 136 AYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA-DRGLSPDVDIYNTII 194
AY+ S+ D + P+ + Y ++ + + E ++R + ++ + + ++
Sbjct: 81 AYQHYSKRKD--YQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLM 138
Query: 195 TWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGL 254
G+ ++ A+E M + G P + ++++++ L + E +F + G+
Sbjct: 139 RIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGV 198
Query: 255 STGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGR 314
L+ C G L D P +R P+++T++ LI G C G+
Sbjct: 199 EIDACCLNILIKGLCESGNLEAALQLLDE----FPQQKSR--PNVMTFSPLIRGFCNKGK 252
Query: 315 FEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
FEEA +L M + + PD ++++ +IS K G +L+ M K
Sbjct: 253 FEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVK 301
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 7/214 (3%)
Query: 133 VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT 192
+++A ++L M D G PS ++N ++ E I G+ D N
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
+I G + L+ AL+ + ++ P+ T+S LI C + + EAF L M +
Sbjct: 208 LIK-GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCM 312
+ + L++ +G + L + +K V P+ TY ++YG
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMK------VKGCEPNPGTYQEVLYGLLDK 320
Query: 313 GRFEEALGILRGMAEMGLSPDAVSYSTVISRFCK 346
R EA ++ M G+ P +SY ++ C+
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCE 354
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 22/183 (12%)
Query: 31 LKVIIPGFAAAGNLQ---------PE----------SNKVSGLWNLKARTEKDVGRIREV 71
L ++I G +GNL+ P+ S + G N K + E+ + +
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCN-KGKFEEAFKLLERM 263
Query: 72 AEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQE 131
++ + ++FN I L KGR+ M KG + TY +++ ++
Sbjct: 264 EKERIEPDTITFNIL--ISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKK 321
Query: 132 EVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYN 191
+A +++S+MI G PS +Y K+V CE V E +LR M + G P ++
Sbjct: 322 RNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWW 381
Query: 192 TII 194
++
Sbjct: 382 KVV 384
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 111/261 (42%), Gaps = 35/261 (13%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVRE-AAGI 174
D TY+ LI F DK +LS+M +G P+ TYN L+ AY + E + +
Sbjct: 220 DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTL 279
Query: 175 LRVMADRGLSPDVDIYN-TIITWGGDQELE-LDTALEFKAKMVEKGILPHADTYSWLIVS 232
++++ + PD N T+ +GG+ ++E ++ E K GI P+ T++ L+ S
Sbjct: 280 IQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYE---KFQSSGIEPNIRTFNILLDS 336
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKG--FLPD 290
+ + M + S Y +++AF G+ ++ +L ++ P
Sbjct: 337 YGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPS 396
Query: 291 FVT---------------------RFSPS------LVTYNALIYGHCCMGRFEEALGILR 323
VT RF + LV +N L+ + M +F E G+L
Sbjct: 397 CVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLE 456
Query: 324 GMAEMGLSPDAVSYSTVISRF 344
M + G PD ++Y T++ +
Sbjct: 457 LMEKKGFKPDKITYRTMVKAY 477
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 13/234 (5%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL-RVM 178
Y LI M ++ +KA+++ EMI+ G + Y LV AY R A +L R+
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMK 212
Query: 179 ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR 238
+ PDV Y+ +I Q D + + M +GI P+ TY+ LI + +
Sbjct: 213 SSHNCQPDVHTYSILIK-SFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKM 271
Query: 239 LSEAFDLFREMLRGGLSTGEP---AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
E +ML G +P S + AF G+ + + ++ + +
Sbjct: 272 FVEMESTLIQML--GEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQS------SGI 323
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
P++ T+N L+ + G +++ ++ M + S V+Y+ VI F + G+
Sbjct: 324 EPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGD 377
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 221 PHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL 280
P+ Y LIV L ++ +A +LF+EM+ G YT+L++A+ G F F L
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 281 HDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTV 340
+ +K P + TY+ LI + F++ +L M G+ P+ ++Y+T+
Sbjct: 208 LERMKS-----SHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTL 262
Query: 341 ISRFCK 346
I + K
Sbjct: 263 IDAYGK 268
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 8/254 (3%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M + G+ LD TY+++I +KA + M G P TY+ ++ Y + +
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYS 227
V E + G PD ++ + G+ + D +M + P+ Y+
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG-DYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
L+ ++ + A LF EML GL+ E T+L+ + K DA++ +
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKI------YGKARWARDALQLW 384
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAE-MGLSPDAVSYSTVISRFCK 346
++ + YN L+ +G EEA + M E + PD SY+ +++ +
Sbjct: 385 EEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGS 444
Query: 347 IGEPGMAYELMVEM 360
G+ A EL EM
Sbjct: 445 GGKAEKAMELFEEM 458
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFER--RLSEAFDLFREMLRGGLSTGEPAYTSLMN 266
E +MV+ G+ TYS +I C +R ++A + F M + GL E Y+++++
Sbjct: 207 EMALEMVKDGVELDNITYSTIIT--CAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILD 264
Query: 267 AFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNAL--IYGHCCMGRFEEALGILRG 324
+ G+ +V L++ T + P + ++ L ++G G ++ +L+
Sbjct: 265 VYSKSGKVEEVLSLYERA------VATGWKPDAIAFSVLGKMFGEA--GDYDGIRYVLQE 316
Query: 325 MAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
M M + P+ V Y+T++ + G+PG+A L EM E
Sbjct: 317 MKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLE 354
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 7/187 (3%)
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFER 237
M G+ D Y+TIIT L + A+E+ +M + G++P TYS ++
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNL-YNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 238 RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSP 297
++ E L+ + G A++ L F G++ + ++ +K P
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSM------DVKP 324
Query: 298 SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELM 357
++V YN L+ G+ A + M E GL+P+ + + ++ + K A +L
Sbjct: 325 NVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLW 384
Query: 358 VEMNEKE 364
EM K+
Sbjct: 385 EEMKAKK 391
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 118 RTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRV 177
R Y +L+ + +E +++V++EM R F + Y K++R Y + ++A GI+
Sbjct: 54 RLYNALVSRYLRKE---VSWRVVNEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEE 110
Query: 178 MADRGLSPDVDIYNTIITWGGDQELELDTALEFKA---------KMVEKGILPHADTYSW 228
+ + GL DV+IYN++I G ELD L+F + K+ +G+ P A+ +
Sbjct: 111 IREIGLPMDVEIYNSVIDTFGKYG-ELDEELQFGSFEDIGELVGKLKSQGVAPSANLFCT 169
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFL 288
L + + + + + M G+ L+NAF G+ + ++ IK
Sbjct: 170 LANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGKHMEALSIYHHIKE-- 227
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFE 316
P +VTY+ L+ ++E
Sbjct: 228 ---TVWIHPDVVTYSTLMKAFTRAKKYE 252
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 112/253 (44%), Gaps = 14/253 (5%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY L+ F +VD+ + ++ SP V T+N ++ AY + ++E +L M
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 179 ADRGLSPDVDIYNTII-TWGGDQELE-LDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
PD+ +N +I ++G QE E ++ + + EK LP T++ +I++
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP---TFNSMIINYGKA 326
Query: 237 RRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS 296
R + +A +F++M Y ++ + G S+ + + + D V + S
Sbjct: 327 RMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGE--SDRVLKAS 384
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
T NA++ +C G + EA + + + PDA +Y + + K M ++
Sbjct: 385 ----TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK---ADMKEQV 437
Query: 357 MVEMNEKEIRGVL 369
+ M + E G++
Sbjct: 438 QILMKKMEKDGIV 450
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 109/267 (40%), Gaps = 39/267 (14%)
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT---WGGDQEL 202
R + P Y+KL+ ++ + R A + M + G PD +YN +IT D+
Sbjct: 127 RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186
Query: 203 ELDTALEFKAKMVEKGI---LPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
L+ + KM KGI P+ TY+ L+ + ++ + LF+++ +S
Sbjct: 187 ALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKG--FLPDFVT------------------------ 293
+ +M+A+ G ++ + ++ PD +T
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 294 ---RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
+ P+L T+N++I + ++A + + M +M P ++Y +I + G
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 351 GMAYELMVEMNEKEIRGVLMKSCINHL 377
A E+ E+ E + VL S +N +
Sbjct: 365 SRAREIFEEVGESD--RVLKASTLNAM 389
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 112/253 (44%), Gaps = 14/253 (5%)
Query: 119 TYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVM 178
TY L+ F +VD+ + ++ SP V T+N ++ AY + ++E +L M
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 179 ADRGLSPDVDIYNTII-TWGGDQELE-LDTALEFKAKMVEKGILPHADTYSWLIVSLCFE 236
PD+ +N +I ++G QE E ++ + + EK LP T++ +I++
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLP---TFNSMIINYGKA 326
Query: 237 RRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFS 296
R + +A +F++M Y ++ + G S+ + + + D V + S
Sbjct: 327 RMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGE--SDRVLKAS 384
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYEL 356
T NA++ +C G + EA + + + PDA +Y + + K M ++
Sbjct: 385 ----TLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK---ADMKEQV 437
Query: 357 MVEMNEKEIRGVL 369
+ M + E G++
Sbjct: 438 QILMKKMEKDGIV 450
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 109/267 (40%), Gaps = 39/267 (14%)
Query: 146 RGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIIT---WGGDQEL 202
R + P Y+KL+ ++ + R A + M + G PD +YN +IT D+
Sbjct: 127 RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186
Query: 203 ELDTALEFKAKMVEKGI---LPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
L+ + KM KGI P+ TY+ L+ + ++ + LF+++ +S
Sbjct: 187 ALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVY 244
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIKG--FLPDFVT------------------------ 293
+ +M+A+ G ++ + ++ PD +T
Sbjct: 245 TFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Query: 294 ---RFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
+ P+L T+N++I + ++A + + M +M P ++Y +I + G
Sbjct: 305 MRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 351 GMAYELMVEMNEKEIRGVLMKSCINHL 377
A E+ E+ E + VL S +N +
Sbjct: 365 SRAREIFEEVGESD--RVLKASTLNAM 389
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 43/249 (17%)
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
T+LI M+ V+ A KV EM P++ +N ++ A + V A R + D
Sbjct: 145 TTLIGMYGGCGCVEFARKVFDEM----HQPNLVAWNAVITACFRGNDVAGA----REIFD 196
Query: 181 RGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW--LIVSLCFERR 238
+ L + +N ++ G + EL++A ++M PH D SW +IV +
Sbjct: 197 KMLVRNHTSWNVMLA-GYIKAGELESAKRIFSEM------PHRDDVSWSTMIVGIAHNGS 249
Query: 239 LSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEG--EFSKVFHLHDAIKGF--------- 287
+E+F FRE+ R G+S E + T +++A G EF K+ H G+
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNA 309
Query: 288 LPDFVTRFSP---------------SLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSP 332
L D +R +V++ ++I G G+ EEA+ + M G++P
Sbjct: 310 LIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTP 369
Query: 333 DAVSYSTVI 341
D +S+ +++
Sbjct: 370 DGISFISLL 378
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 9/215 (4%)
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
++ G+ +D ++ I FC +D AY + EM G +P V TY L+ A + +R
Sbjct: 169 SKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERC 228
Query: 169 REAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
G+ +M +G P++ +N I + ++ D A + M + + P + TY+
Sbjct: 229 VIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWD-ANDLLLLMPKLQVEPDSITYNM 287
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHL-HDAIKGF 287
+I R A ++ M G Y ++++ C G F + + D ++
Sbjct: 288 VIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMR-- 345
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGIL 322
++ P+L T L+ G G+ ++A I+
Sbjct: 346 -----KKWYPNLDTVEMLLKGLVKKGQLDQAKSIM 375
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 3/214 (1%)
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
VSFN I+ C G + M + GL D TYT+LI E +
Sbjct: 178 VSFNIA--IKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
+ M+ +G P++ T+N ++ R +A +L +M + PD YN +I G
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIK-GFFL 294
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
D A M KG P+ Y +I LC A+ + ++ +R
Sbjct: 295 ARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDT 354
Query: 261 YTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTR 294
L+ +G+ + + + + +P F ++
Sbjct: 355 VEMLLKGLVKKGQLDQAKSIMELVHRRVPPFRSK 388
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 118/292 (40%), Gaps = 19/292 (6%)
Query: 71 VAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQ 130
V T+ + LVS+ LCG + M GL + SL+
Sbjct: 390 VPSSTSYENLVSY--------LCGSNEVVTALDIVENMCEAGLVISANILHSLLQAIEQI 441
Query: 131 EEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIY 190
E + ++ S M ++ P+ T+ K + A +L + + L+P+ +Y
Sbjct: 442 LEFNLVQRIYSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMY 501
Query: 191 NTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREML 250
N+I+ G +E ++++AL+ +M E + P + T+S+LI + C E + ++EM
Sbjct: 502 NSIMA-GYFREKKVNSALKVLKEMKEADVKPDSVTFSYLI-NYCGEEATIAKY--YKEMK 557
Query: 251 RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHC 310
+ G+ + Y SL+ A+ G+F K K L D + LI
Sbjct: 558 QAGVEVNKHVYMSLVKAYASCGQFEKA-------KQVLMDLEVPAKDHNELKSVLISALA 610
Query: 311 CMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
G EAL I M ++ + + ++I E G EL E+ +
Sbjct: 611 SNGNITEALSIYEEMKKLRCPVEPKAILSLIENSDSNAELGTLVELTHELRD 662
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
+++ C V +A K+ M D+G P V Y +V A+C+ ++ +A I R M +
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
G++P+ Y ++ + + LD A+ F ++M+E G P+ T+ L+ +LC + + +
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNM-LDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQ 254
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMN 266
A + + G + A M+
Sbjct: 255 AQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 131 EEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIY 190
E+ D+ +K +M + G P+ ++ C++ V+EA + +M D+G P+V IY
Sbjct: 116 EDSDEIFK---KMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIY 169
Query: 191 NTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREML 250
T + + +++ A KM GI P+A +Y L+ L L +A EML
Sbjct: 170 -TAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEML 228
Query: 251 RGGLSTGEPAYTSLMNAFC 269
G S P + L++A C
Sbjct: 229 ESGHSPNVPTFVELVDALC 247
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
+++ C V +A K+ M D+G P V Y +V A+C+ ++ +A I R M +
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 182 GLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSE 241
G++P+ Y ++ + + LD A+ F ++M+E G P+ T+ L+ +LC + + +
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNM-LDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQ 254
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMN 266
A + + G + A M+
Sbjct: 255 AQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 131 EEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIY 190
E+ D+ +K +M + G P+ ++ C++ V+EA + +M D+G P+V IY
Sbjct: 116 EDSDEIFK---KMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIY 169
Query: 191 NTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREML 250
T + + +++ A KM GI P+A +Y L+ L L +A EML
Sbjct: 170 -TAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEML 228
Query: 251 RGGLSTGEPAYTSLMNAFC 269
G S P + L++A C
Sbjct: 229 ESGHSPNVPTFVELVDALC 247
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 117/307 (38%), Gaps = 62/307 (20%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
+ GL LD +SL ++ ++++YK+ + + A + ++ + E +R
Sbjct: 478 KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK----DNACWASMISGFNEYGYLR 533
Query: 170 EAAGILRVMADRGLSPDVDIYNTIIT--------------------WGGDQELELDTAL- 208
EA G+ M D G SPD ++T G D+ ++L +AL
Sbjct: 534 EAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALV 593
Query: 209 -------EFKAKMVEKGILPHAD--TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEP 259
K LP D + S LI + + F LFR+M+ G +
Sbjct: 594 NMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSF 653
Query: 260 AYTSLMNAFCLEGEFSKVFHLHDAIK---------------------GFLPDFVTRFS-- 296
A +S++ A L E S +H I G + D FS
Sbjct: 654 AISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQI 713
Query: 297 --PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAY 354
P L+ + ALI + G+ EAL + M E G PD V++ V+S C G G+
Sbjct: 714 NGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSA-CSHG--GLVE 770
Query: 355 ELMVEMN 361
E +N
Sbjct: 771 ESYFHLN 777
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 120 YTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMA 179
YT+LI + E+DKA ++ EM +G P+V TYN ++R C REA +L+ M
Sbjct: 727 YTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 786
Query: 180 DRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPH 222
RG +P+ +Y+T++ + + +L A + +MV+KG H
Sbjct: 787 SRGCNPNFVVYSTLVGY-LRKAGKLSEARKVIKEMVKKGHYVH 828
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD--AIKGFLPDFVTRFSPSL 299
A M G+ YT+L++ + + GE K + +KG LP+ +
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPN--------V 759
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
TYN++I G C G F EA +L+ M G +P+ V YST++ K G+ A +++ E
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Query: 360 MNEK 363
M +K
Sbjct: 820 MVKK 823
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 102/230 (44%), Gaps = 18/230 (7%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDR--GFSPSVATYNKLVRAYCEE 165
M++ G ++ +L+ H + ++ ++ E R +P +Y L+++YC+
Sbjct: 128 MDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDS 187
Query: 166 DRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADT 225
+ +A I+R M +G+ + + TI+ L +D A +MV KG
Sbjct: 188 GKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGL-VDEAESLWIEMVNKGCDLDNTV 246
Query: 226 YSWLIVSLCFE--RRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA 283
Y+ +++ E R+ E L EM GL +Y LM A+C++G S+ +++
Sbjct: 247 YNVRLMNAAKESPERVKE---LMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEG 303
Query: 284 IKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPD 333
++ P+ T+ LI+ C G +++ L + + A + PD
Sbjct: 304 LE----------QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPD 343
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%), Gaps = 22/213 (10%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D+ +Y LI +C + +KA +++ +M +G ++ + ++ + + V EA +
Sbjct: 173 DKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLW 232
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
M ++G D +YN + + E E +M G+ P +Y++L+ + C
Sbjct: 233 IEMVNKGCDLDNTVYNVRLMNAAKESPE--RVKELMEEMSSVGLKPDTVSYNYLMTAYCV 290
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSK---VFHLHDAIKGFLPDFV 292
+ +SEA ++ + + +T + +L+ C+ G + + VF AI +PDF
Sbjct: 291 KGMMSEAKKVYEGLEQPNAAT----FRTLIFHLCINGLYDQGLTVFK-KSAIVHKIPDFK 345
Query: 293 T--RFSPSLVTYNALIYGHCCMGRFEEALGILR 323
T + LV N R E+A G+ R
Sbjct: 346 TCKHLTEGLVKNN----------RMEDARGVAR 368
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 227 SWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGE-FSKVFHLHDAIK 285
S LI S A +F EM + G ++ +L+ A CL + F +V L D
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAA-CLHSDLFERVPQLFDE-- 162
Query: 286 GFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFC 345
P +P ++Y LI +C G+ E+A+ I+R M G+ ++++T++
Sbjct: 163 --FPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLY 220
Query: 346 KIGEPGMAYELMVEMNEK 363
K G A L +EM K
Sbjct: 221 KNGLVDEAESLWIEMVNK 238
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 26/267 (9%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D + +L+ + +A ++ M G P+V T+N ++ + +V EA +
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
M G+ P++ + T++ G Q + A+ F KM E G+ P+A + + + +S C
Sbjct: 500 LQMQSSGIIPNLISWTTMMN-GMVQNGCSEEAILFLRKMQESGLRPNAFSIT-VALSACA 557
Query: 236 ER------RLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
R + + R + L + E TSL++ + G+ +K +
Sbjct: 558 HLASLHIGRTIHGY-IIRNLQHSSLVSIE---TSLVDMYAKCGDINKAEKV--------- 604
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
F ++ L NA+I + G +EA+ + R + +GL PD ++ + V+S G+
Sbjct: 605 -FGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGD 663
Query: 350 PGMAYELMVEMNEKEIRGVLMKSCINH 376
A E+ ++ K MK C+ H
Sbjct: 664 INQAIEIFTDIVSKRS----MKPCLEH 686
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 99/248 (39%), Gaps = 38/248 (15%)
Query: 122 SLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADR 181
SL+ M+ ++ A++V E DR S+ +N L+ YC + A + R M +R
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER 225
Query: 182 G-------------------------LSPDVDI--YNTIITWGGDQELELDTALEFKAKM 214
L P+ ++ + T+I G Q + +TA+ +M
Sbjct: 226 NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLIN-GFSQTGDYETAISTYFEM 284
Query: 215 VEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEF 274
+EKG+ P+ T + ++ + L + +L G+ T+L++ + GE
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 275 SKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDA 334
+ F ++++ A+I G GRF +A+ R M G PD
Sbjct: 345 DCAATV----------FSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDE 394
Query: 335 VSYSTVIS 342
V + V++
Sbjct: 395 VVFLAVLT 402
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 185 PDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF---ERRLSE 241
P++ +YN++I + L +T L+ + + G+ H T+ L++ C R+L
Sbjct: 74 PNIFLYNSLINGFVNNHLFHET-LDLFLSIRKHGLYLHGFTFP-LVLKACTRASSRKL-- 129
Query: 242 AFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVT 301
DL +++ G + A TSL++ + G + L D I PD S+VT
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI----PD------RSVVT 179
Query: 302 YNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMN 361
+ AL G+ GR EA+ + + M EMG+ PD+ V+S +G+ ++ M
Sbjct: 180 WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME 239
Query: 362 EKEIR 366
E E++
Sbjct: 240 EMEMQ 244
>AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26047372-26049348 REVERSE
LENGTH=658
Length = 658
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 134 DKAYKVLSEMIDRGF-SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT 192
DKA+ +L EMI +G S + Y +++AYC+E R EA ++ ++ GL DV+I N
Sbjct: 379 DKAHSILEEMIAQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEISSSGLQLDVEISNA 438
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERR--LSEAF-DLFREM 249
+I + + +A M E ++ +Y ++ L +R L AF D E
Sbjct: 439 LIEASMTNQ-DFISAFTLFRDMRENRVVDLKGSYLTIMTGLLENQRPELMAAFLDEVVED 497
Query: 250 LRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGH 309
R +++ + + S+++AFC G L DA + F R+ P+ TY +LI G+
Sbjct: 498 PRVEVNSHD--WNSIIHAFCKSG------RLEDARRTFRRMVFLRYEPNNQTYLSLINGY 549
Query: 310 CCMGRF 315
++
Sbjct: 550 VSGEKY 555
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 110/265 (41%), Gaps = 26/265 (9%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D ++TS++ + +E KA +V EM+ G + T + V+A E VR
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
V+ G + I +T+ G +D F +P D W V F
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE-------MPEPDVICWTAVLSAF 239
Query: 236 ERR--LSEAFDLFREMLRG-GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
+ EA LF M RG GL + +++ A + +H +
Sbjct: 240 SKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL------IT 293
Query: 293 TRFSPSLVTYNALI--YGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEP 350
++V ++L+ YG C G EA + GM++ ++VS+S ++ +C+ GE
Sbjct: 294 NGIGSNVVVESSLLDMYGKC--GSVREARQVFNGMSK----KNSVSWSALLGGYCQNGEH 347
Query: 351 GMAYELMVEMNEKEIR--GVLMKSC 373
A E+ EM EK++ G ++K+C
Sbjct: 348 EKAIEIFREMEEKDLYCFGTVLKAC 372
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 133/331 (40%), Gaps = 17/331 (5%)
Query: 35 IPGFAAAGNLQPESNKVSGLWNLKARTEKDVGRIREVAEKTNQKGLVSFNAT--ATIQDL 92
IP F P + ++ L + R + + + E+ K + G+ +T I L
Sbjct: 134 IPNFRCV----PSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDAL 189
Query: 93 CGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMID---RGFS 149
C G + M++ + +D R Y+ L+ C ++ + V+ + D FS
Sbjct: 190 CRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKD-SSCFDVIGYLEDLRKTRFS 248
Query: 150 PSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALE 209
P + Y ++R E R +E +L M + PD+ Y TI+ G + + A +
Sbjct: 249 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCY-TIVLQGVIADEDYPKADK 307
Query: 210 FKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFC 269
+++ G+ P TY+ I LC + + A + M + G Y L+ A
Sbjct: 308 LFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALV 367
Query: 270 LEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG 329
G+ S+ L ++ + V R S T++ +I + + A G+L M
Sbjct: 368 KAGDLSRAKTLWKEMET---NGVNRNSH---TFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
Query: 330 LSPDAVSYSTVISRFCKIGEPGMAYELMVEM 360
+ + VISR C+ G A EL+ +
Sbjct: 422 VFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 28/263 (10%)
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
L D Y ++++ +++ + A+ VL ++ RG PS TY ++ ++
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVH 648
Query: 173 GILRVMADRGLSPDVDIYNTIIT--WGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
R M + P+ Y ++ W +E + D A+ M +GI+ A Y L
Sbjct: 649 EFFRKMQKSSI-PNALAYRVLVNTLW---KEGKSDEAVHTVEDMESRGIVGSAALYYDLA 704
Query: 231 VSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPD 290
LC R +E ++ +++ R YT L+ A G ++ D +K
Sbjct: 705 RCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVC-- 762
Query: 291 FVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMG------------LSPDAVSYS 338
SP+LVT N ++ + G FEEA + + M+E G + PD +++
Sbjct: 763 -----SPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFN 817
Query: 339 TVISRFC---KIGEPGMAYELMV 358
T++ K + G AY M+
Sbjct: 818 TMLDTCAEQEKWDDFGYAYREML 840
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 108 MNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR 167
M K +++D Y + C+ E++ A +V+ ++ + G SP +Y+ LV C +
Sbjct: 168 MRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGK 227
Query: 168 VREAAGILRVMADRGLSPDVDIYNTIITW---GGDQELELDTALEFKAKMVEKGILPHAD 224
V A ILR M + G++ + +IT GG L LEF K + ++
Sbjct: 228 VEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYAL----GLEFVMAYAGKDLRLDSE 283
Query: 225 TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGE 258
++ +L L +R EA + +EM+ GL G+
Sbjct: 284 SFGFLAGKLVKRKRYEEAMIVVKEMVMRGLRMGD 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 89 IQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGF 148
I LC GR+ M+ L L TY ++ + ++++A++V+ M +
Sbjct: 114 ISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKSV 173
Query: 149 SPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTAL 208
S V YN + ++C + + A+ ++R + + G SPD Y+ ++ G + +++ A+
Sbjct: 174 SMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALV-LGACRAGKVEAAM 232
Query: 209 EFKAKMVEKGILPHADTYSWLIVSL 233
+M E G+ T++ +I L
Sbjct: 233 AILRRMEEDGVTVLYSTHAHVITGL 257
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 218 GILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKV 277
G+ P TY ++ SL + ++ EA+ + M +S AY + + C +GE
Sbjct: 139 GLTPS--TYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESA 196
Query: 278 FHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSY 337
+ I+ SP +Y+AL+ G C G+ E A+ ILR M E G++ ++
Sbjct: 197 SEVMRKIEE------DGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGVTVLYSTH 250
Query: 338 STVISRFCKIGEPGMAYELMVEMNEKEIR 366
+ VI+ + G + E ++ K++R
Sbjct: 251 AHVITGLVEGGYYALGLEFVMAYAGKDLR 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 117 QRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILR 176
+ Y LI C +D A V+ +M + + +TY+ ++ + + ++ EA ++
Sbjct: 107 KNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVE 166
Query: 177 VMADRGLSPDVDIYNTIIT---WGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSL 233
M + +S DV YN +T + G EL++A E K+ E G P + +Y L++
Sbjct: 167 SMRSKSVSMDVTAYNYFLTSHCYDG----ELESASEVMRKIEEDGNSPDSRSYDALVLGA 222
Query: 234 CFERRLSEAFDLFREMLRGGLS 255
C ++ A + R M G++
Sbjct: 223 CRAGKVEAAMAILRRMEEDGVT 244
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 219 ILPHAD-------TYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLE 271
+LP D Y LI LC R+ +A + +M G L Y ++ + +
Sbjct: 96 VLPQIDGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRK 155
Query: 272 GEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLS 331
+ + + + ++++ S + YN + HC G E A ++R + E G S
Sbjct: 156 YKIEEAWRVVESMRS------KSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNS 209
Query: 332 PDAVSYSTVISRFCKIGEPGMAYELMVEMNE 362
PD+ SY ++ C+ G+ A ++ M E
Sbjct: 210 PDSRSYDALVLGACRAGKVEAAMAILRRMEE 240
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 107/279 (38%), Gaps = 28/279 (10%)
Query: 81 VSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVL 140
++++ +I CG+ + N+ ++L + ++I +E+ D A K+
Sbjct: 250 ITYSLLVSIFVRCGRSELALDVYDEMVNNK--ISLREDAMYAMISACTKEEKWDLALKIF 307
Query: 141 SEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQ 200
M+ +G P++ N L+ + + +V + V+ G PD +N ++T
Sbjct: 308 QSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKA 367
Query: 201 ELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPA 260
D F E + Y+ +VS +A L EM GL+ +
Sbjct: 368 NRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSS 427
Query: 261 YTSLMNAFCLEGEFSKVFHL---HDAIKGFLP----------------------DFVTRF 295
Y +++A C + SKV L H A + P D + +
Sbjct: 428 YNLVISA-CEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKV 486
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDA 334
P + YNA I+G C F+ A + M EMGL PD
Sbjct: 487 EPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDG 525
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 109/244 (44%), Gaps = 12/244 (4%)
Query: 114 ALDQRTYTSLIHMFCHQ--EEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDR-VRE 170
+L + Y+SL+ +C Q + + ++ +L + G P+ T+ L A+ E R +
Sbjct: 96 SLPKIVYSSLL-TYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLSDAWLERRRGSQS 154
Query: 171 AAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLI 230
A I+ M G SPD N +++ + +LD A++ +M G +P ++Y +I
Sbjct: 155 VADIINEMKLIGYSPDTGTCNYLVSSLCAVD-KLDEAIKVVEEMSAAGCIPDVESYGAVI 213
Query: 231 VSLCFERRLSEAFDLFREML-RGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLP 289
SLC R+ ++ + +EM+ + G+S + T + A E K + + ++
Sbjct: 214 NSLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESR-- 271
Query: 290 DFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
D+ F +Y ++ G + + A ++ M + G P V+ R IGE
Sbjct: 272 DYPVEFE----SYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIGE 327
Query: 350 PGMA 353
+A
Sbjct: 328 WKLA 331
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 61/256 (23%)
Query: 121 TSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMAD 180
T+L+ M+ ++ A ++ M++R +V ++N ++ AY + + +EA I + M D
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 181 RGLSP-DVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRL 239
G+ P DV + + +LE + + + K L V L +R +
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLE-------RGRFIHK-----------LSVELGLDRNV 372
Query: 240 SEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSL 299
S SL++ +C E + ++ S +L
Sbjct: 373 S-------------------VVNSLISMYCKCKEVDTAASMFGKLQ----------SRTL 403
Query: 300 VTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVE 359
V++NA+I G GR +AL M + PD +Y +VI+ EL +
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA---------ELSIT 454
Query: 360 MNEKEIRGVLMKSCIN 375
+ K I GV+M+SC++
Sbjct: 455 HHAKWIHGVVMRSCLD 470
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D+ TY ++I FC ++ +A K+ + M+D GF + K++ ++++ EA+ +
Sbjct: 214 DEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVF 273
Query: 176 RVM-ADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLC 234
VM + RG D Y +I W + +D A + +M E+G+ T++ LI L
Sbjct: 274 YVMVSKRGGDLDGGFYRVMIDWLC-KNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLL 332
Query: 235 FERRLSEAFDL 245
+RR+ EA+ L
Sbjct: 333 VKRRVVEAYGL 343
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 112/274 (40%), Gaps = 22/274 (8%)
Query: 70 EVAEKTNQKGLVSFNA-TATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTSLIHMFC 128
E+A++ ++GLV+ ++ L + MN G + T + C
Sbjct: 133 ELAQEIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLC 192
Query: 129 HQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVD 188
++ V++A V ++ P TY +++ +C+ + EAA + +M D G D++
Sbjct: 193 KEKLVEEAKFVFIKL-KEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIE 251
Query: 189 ----IYNTIITWGGDQELELDTALEFKAKMVEK-GILPHADTYSWLIVSLCFERRLSEAF 243
I T++ ++ + D A + MV K G Y +I LC R+ A
Sbjct: 252 AGKKIMETLL-----KKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMAR 306
Query: 244 DLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYN 303
+F EM G+ + SL+ ++ + + L + ++ +P + Y+
Sbjct: 307 KVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVE----------NPDISIYH 356
Query: 304 ALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSY 337
LI G + R EA + R M + G P +Y
Sbjct: 357 GLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTY 390
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 37/280 (13%)
Query: 63 KDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXXXXXXXMNRKGLALDQRTYTS 122
KD+ + +Q+G F A +D M R+G+ LD ++TS
Sbjct: 238 KDMISWNSLLSGLSQEGTFGFEAVVIFRD----------------MMREGVELDHVSFTS 281
Query: 123 LIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRG 182
+I CH+ ++ A ++ I RG+ + N L+ Y + + + M++R
Sbjct: 282 VITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER- 340
Query: 183 LSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEA 242
+++W D A+ M G+ P+ T+ LI ++ ++ E
Sbjct: 341 ---------NVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 243 FDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTY 302
+ ++ G EP S+ N+F ++K L DA K F D R ++++
Sbjct: 392 LKIHGLCIKTGF-VSEP---SVGNSFIT--LYAKFEALEDAKKAF-EDITFR---EIISW 441
Query: 303 NALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
NA+I G G EAL + A + P+ ++ +V++
Sbjct: 442 NAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLN 480
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 27/204 (13%)
Query: 147 GFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDT 206
GF+ V N ++ Y + R A I + D PDV +NTI++ D ++
Sbjct: 106 GFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVD----PDVVSWNTILSGFDDNQI---- 157
Query: 207 ALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAF----DLFREMLRGGLSTGEPAYT 262
AL F +M G++ A TYS +S C SE F L +++ GL +
Sbjct: 158 ALNFVVRMKSAGVVFDAFTYS-TALSFCVG---SEGFLLGLQLQSTVVKTGLESDLVVGN 213
Query: 263 SLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFE-EALGI 321
S + + G F + D + ++++N+L+ G G F EA+ I
Sbjct: 214 SFITMYSRSGSFRGARRVFDEMS----------FKDMISWNSLLSGLSQEGTFGFEAVVI 263
Query: 322 LRGMAEMGLSPDAVSYSTVISRFC 345
R M G+ D VS+++VI+ C
Sbjct: 264 FRDMMREGVELDHVSFTSVITTCC 287
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D ++ ++I + + E++KA ++ M+++ + ++N ++ Y E + +A+
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFF 209
Query: 176 RVMADRG----------------------LSPDVDIYNTIITW-----GGDQELELDTAL 208
+V RG + D+ + ++TW G + + L
Sbjct: 210 KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 209 EFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAF 268
+ M+E+GI P++ S ++ L + + + + L A TSL++ +
Sbjct: 270 KLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMY 329
Query: 269 CLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEM 328
C GE + L + +K +V +NA+I G+ G ++AL + R M +
Sbjct: 330 CKCGELGDAWKLFEVMK----------KKDVVAWNAMISGYAQHGNADKALCLFREMIDN 379
Query: 329 GLSPDAVSYSTVISRFCKIG--EPGMAY 354
+ PD +++ V+ G GMAY
Sbjct: 380 KIRPDWITFVAVLLACNHAGLVNIGMAY 407
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 114/286 (39%), Gaps = 65/286 (22%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D +YT+LI + + ++ A K+ E+ + V ++N ++ Y E +EA +
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELF 254
Query: 176 RVMADRGLSPDVDIYNTIIT----------------WGGDQ----ELELDTAL------- 208
+ M + PD T+++ W D L++ AL
Sbjct: 255 KDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC 314
Query: 209 ---EFKAKMVEKGILPHADTYSW--LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTS 263
E + E+ LP+ D SW LI EA LF+EMLR G + + S
Sbjct: 315 GELETACGLFER--LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 264 LMNAFCLEG--EFSKVFHLH-----------DAIKGFLPD--------------FVTRFS 296
++ A G + + H++ +++ L D F +
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH 432
Query: 297 PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
SL ++NA+I+G GR + + + M ++G+ PD +++ ++S
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 22/185 (11%)
Query: 185 PDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFD 244
P++ I+NT+ G + +AL+ M+ G+LP++ T+ +++ S + E
Sbjct: 97 PNLLIWNTMFR-GHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 245 LFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHD-----------------AIKGF 287
+ +L+ G +TSL++ + G + D A +G+
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 288 LPDFVTRFS----PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISR 343
+ + F +V++NA+I G+ G ++EAL + + M + + PD + TV+S
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 344 FCKIG 348
+ G
Sbjct: 276 CAQSG 280
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 10/166 (6%)
Query: 204 LDTALEFKAKMVEKG-ILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYT 262
+D AL +M E G I + +Y+ ++ L RR+ EAF + E + G + G P +
Sbjct: 93 IDLALRMFHEMAEPGGIGVDSISYATILKGLGKARRIDEAFQML-ETIEYGTAAGTPKLS 151
Query: 263 S-----LMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEE 317
S L++A G+ + L L D T PS++ YN L+ G+ +
Sbjct: 152 SSLIYGLLDALINAGDLRRANGLLARYDILLLDHGT---PSVLIYNLLMKGYVNSESPQA 208
Query: 318 ALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEK 363
A+ +L M + L PD ++Y+T+I K G+ A + +M EK
Sbjct: 209 AINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEK 254
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 19/154 (12%)
Query: 115 LDQRTYTSLIHMFCHQEEVDKAYKVLSEMID-RGFSPSVATYNKLVRAYCEEDRVREAAG 173
+ + Y +I C ++ + +A + MID SPS+ YN ++ +Y ++ + EA
Sbjct: 129 ISENNYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIHSYADDGKFEEAMF 188
Query: 174 ILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSL 233
L M + GL P + Y+ +I G ++ + L K +M G + TY+ LI
Sbjct: 189 YLNHMKENGLLPITETYDGLIEAYGKWKMYDEIVLCLK-RMESDGCVRDHVTYNLLI--- 244
Query: 234 CFERRLSEAFDLFREMLRGG-LSTGEPAYTSLMN 266
RE RGG L E Y SLM+
Sbjct: 245 -------------REFSRGGLLKRMEQMYQSLMS 265
>AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:25933023-25934882 FORWARD
LENGTH=619
Length = 619
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 8/228 (3%)
Query: 139 VLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNTIITWGG 198
+L E+ +G S + Y +++AYC+E R EA ++ ++ GL DV+ YNT+I
Sbjct: 354 ILDELNAQGGSGGIGVYVPILKAYCKEGRTSEATQLVTEISSSGLQLDVETYNTMIEASM 413
Query: 199 DQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRGG-LSTG 257
+ + +AL M E + Y ++ L +R + E++ +
Sbjct: 414 TKH-DFLSALTLFRDMRETRVADLKRCYLTIMTGLLENQRPELMAEFVEEVMEDPRVEVK 472
Query: 258 EPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYGHCCMGRFEE 317
+ S+++AFC G L DA F ++ P+ TY +LI G+ ++ E
Sbjct: 473 SHDWNSIIHAFCKSG------RLGDAKSTFRRMTFLQYEPNNQTYLSLINGYVSCEKYFE 526
Query: 318 ALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYELMVEMNEKEI 365
+ I + + + ++ K G G A +++ + E +I
Sbjct: 527 VVVIWKEFKDKKAKLEHALADAFLNALVKGGFFGTALQVIEKCQEMKI 574
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 105/248 (42%), Gaps = 11/248 (4%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D + ++I + + + D+A ++ +M G P V T+N L+ + + + IL
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+M G PDV + +II+ G + + A + +M+ G+ P++ T L+ +
Sbjct: 242 ELMCLDGYKPDVVSWTSIIS-GLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTT 300
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
+ ++ + GL ++L++ + G S+ L F
Sbjct: 301 LAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMIL----------FRKTP 350
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
+ VT+N++I+ + G ++A+ + M G D ++++ +++ G +
Sbjct: 351 KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQN 410
Query: 356 LMVEMNEK 363
L + M K
Sbjct: 411 LFLLMQNK 418
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 25/129 (19%)
Query: 241 EAFDLFREMLRGGLSTGEPAYTSLMNAF--CLEGEFSKVFHL--------HDA-IKGFLP 289
E+ D FREM + GL SL+ A L+ EF K+ H DA I L
Sbjct: 100 ESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLI 159
Query: 290 DFVTRFS--------------PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAV 335
D ++F LV +NA+I G+ + +EAL +++ M +G+ PD +
Sbjct: 160 DMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVI 219
Query: 336 SYSTVISRF 344
+++ +IS F
Sbjct: 220 TWNALISGF 228
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 98/251 (39%), Gaps = 19/251 (7%)
Query: 113 LALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAA 172
+ +D ++I + +D A + EM ++ TY ++ Y V+EA
Sbjct: 265 IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK----DSVTYGAIISGYMAHGLVKEAM 320
Query: 173 GILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVS 232
+ M GLS +N +I+ G Q + + +M+ G P+ T S L+ S
Sbjct: 321 ALFSEMESIGLST----WNAMIS-GLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPS 375
Query: 233 LCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFV 292
L + L ++ +R G TS+++ + G + D K
Sbjct: 376 LTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK------- 428
Query: 293 TRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGM 352
SL+ + A+I + G + A + M +G PD V+ + V+S F G+ M
Sbjct: 429 ---DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDM 485
Query: 353 AYELMVEMNEK 363
A + M K
Sbjct: 486 AQHIFDSMLTK 496
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 26/238 (10%)
Query: 133 VDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGILRVMADRGLSPDVDIYNT 192
V A K ++ D P V+ N ++R + + + + M RG+SPD +
Sbjct: 58 VPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTF 117
Query: 193 IITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCFERRLSEAFDLFREMLRG 252
++ E F K+V G + + + LI+ L A +LF + +
Sbjct: 118 VLKACSKLEWR-SNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKA 176
Query: 253 GLSTGEPAYTSLMNAFCLEGEFSKVFHLHDA------------IKGFLP--------DFV 292
+ A++S+ + + G+ + L D I G L +
Sbjct: 177 H----KVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELF 232
Query: 293 TRFS-PSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGE 349
RF+ +VT+NA+I G+ G +EALGI + M + G PD V+ +++S +G+
Sbjct: 233 DRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 119/286 (41%), Gaps = 43/286 (15%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D T+T +I E +A +LS+M+ G P +TY+ L+ + + + I
Sbjct: 430 DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIH 489
Query: 176 RVMADRG--LSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW--LIV 231
V+A PD+ + N++++ ++ A E AKMV+K DT SW +I+
Sbjct: 490 CVIAKTTACYDPDLILQNSLVSMYAKCG-AIEDAYEIFAKMVQK------DTVSWNSMIM 542
Query: 232 SLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIK---GFL 288
L +A +LF+EML G + +++A G ++ L A+K
Sbjct: 543 GLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQ 602
Query: 289 P---------DFVTR---------------FSPSLVTYNALIYGHCCMG-RFEEALGILR 323
P D + R F+P Y AL+ G C + R ++A GI
Sbjct: 603 PGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALL-GLCGLNWRDKDAEGIAE 661
Query: 324 --GMAEMGLSP-DAVSYSTVISRFCKIGEPGMAYELMVEMNEKEIR 366
M + L P +A + + + + +G M E+ EM K ++
Sbjct: 662 RAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVK 707
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 114/257 (44%), Gaps = 38/257 (14%)
Query: 109 NRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRV 168
N + L L + + L+H A +L ++ RG V + L+ Y + +
Sbjct: 44 NEEALILRRLSEGGLVH----------ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYL 93
Query: 169 REAAGILRVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSW 228
EA + VM +R ++ N ++T G + ++ A +M + + +++
Sbjct: 94 DEARVLFEVMPER----NIVTCNAMLT-GYVKCRRMNEAWTLFREMPKNVV-----SWTV 143
Query: 229 LIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFL 288
++ +LC + R +A +LF EM + + + +L+ G+ K + DA+
Sbjct: 144 MLTALCDDGRSEDAVELFDEMPERNVVS----WNTLVTGLIRNGDMEKAKQVFDAMP--- 196
Query: 289 PDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIG 348
S +V++NA+I G+ EEA + M+E + V++++++ +C+ G
Sbjct: 197 -------SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSE----KNVVTWTSMVYGYCRYG 245
Query: 349 EPGMAYELMVEMNEKEI 365
+ AY L EM E+ I
Sbjct: 246 DVREAYRLFCEMPERNI 262
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 132/334 (39%), Gaps = 61/334 (18%)
Query: 46 PESNKVSGLWNLKAR---TEKDVGRIREVAEKTNQKGLVSFNATATIQDLCGKGRMXXXX 102
PE N VS WN D+ + ++V + + +VS+NA I+ M
Sbjct: 165 PERNVVS--WNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAM--IKGYIENDGMEEAK 220
Query: 103 XXXXXMNRKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAY 162
M+ K + T+TS+++ +C +V +AY++ EM +R ++ ++ ++ +
Sbjct: 221 LLFGDMSEKNVV----TWTSMVYGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGF 272
Query: 163 CEEDRVREAAGILRVMAD--RGLSPDVDIYNTIITWGGDQELELDTALE-FKAKMVEKGI 219
+ REA + M +SP+ + ++ G +E E A+++ G
Sbjct: 273 AWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGW 332
Query: 220 ------------LPHADTYSWLIVSLCFERRLSEAFDL-------FREMLRGGLSTGEP- 259
L H S LI S + L+E+FDL R + G L E
Sbjct: 333 ETVDHDGRLAKSLVHMYASSGLIASA--QSLLNESFDLQSCNIIINRYLKNGDLERAETL 390
Query: 260 -----------AYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRFSPSLVTYNALIYG 308
++TS+++ + G+ S+ F L F VT+ +I G
Sbjct: 391 FERVKSLHDKVSWTSMIDGYLEAGDVSRAFGL----------FQKLHDKDGVTWTVMISG 440
Query: 309 HCCMGRFEEALGILRGMAEMGLSPDAVSYSTVIS 342
F EA +L M GL P +YS ++S
Sbjct: 441 LVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/245 (16%), Positives = 109/245 (44%), Gaps = 19/245 (7%)
Query: 116 DQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVREAAGIL 175
D ++ SLI ++++ +AY++ +M + + ++ +++ + + + + +
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELF 395
Query: 176 RVMADRGLSPDVDIYNTIITWGGDQELELDTALEFKAKMVEKGILPHADTYSWLIVSLCF 235
+M ++ + + ++ G +E AL + KM++K + P++ T+S ++ +
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEE-----ALCWFHKMLQKEVCPNSYTFSSVLSATAS 450
Query: 236 ERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGFLPDFVTRF 295
L E + +++ + SL++ +C G + + + I
Sbjct: 451 LADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS---------- 500
Query: 296 SPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKIGEPGMAYE 355
P++V+YN +I G+ G ++AL + + G P+ V++ ++S +G + ++
Sbjct: 501 EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK 560
Query: 356 LMVEM 360
M
Sbjct: 561 YFKSM 565
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 110/259 (42%), Gaps = 35/259 (13%)
Query: 110 RKGLALDQRTYTSLIHMFCHQEEVDKAYKVLSEMIDRGFSPSVATYNKLVRAYCEEDRVR 169
+ L+LD + I M+ + + +A++V EM R ++N ++ A+ + +
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR----DAVSWNAIIAAHEQNGKGY 465
Query: 170 EAAGILRVMADRGLSPDVDIYNTIIT--WGGDQELELDTALEFKAKMVEKGILPHADTYS 227
E + M + PD + +I+ GG L +E + +V+ G+ ++
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACTGG----SLGYGMEIHSSIVKSGMASNSSVGC 521
Query: 228 WLIVSLCFERRLSEAFDLFREMLRGGLSTGEPAYTSLMNAFCLEGEFSKVFHLHDAIKGF 287
LI D++ + G + E ++ + G ++ +H+
Sbjct: 522 SLI-------------DMYSKC--GMIEEAEKIHSRFFQRANVSGTMEELEKMHN----- 561
Query: 288 LPDFVTRFSPSLVTYNALIYGHCCMGRFEEALGILRGMAEMGLSPDAVSYSTVISRFCKI 347
R V++N++I G+ + E+A + M EMG++PD +Y+TV+ +
Sbjct: 562 -----KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 616
Query: 348 GEPGMAYELMVEMNEKEIR 366
G+ ++ ++ +KE++
Sbjct: 617 ASAGLGKQIHAQVIKKELQ 635