Miyakogusa Predicted Gene
- Lj0g3v0316759.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0316759.2 Non Chatacterized Hit- tr|I1NCL9|I1NCL9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.5088
PE=,81.88,0,Sina,Seven-in-absentia protein, TRAF-like domain;
ZF_RING_2,Zinc finger, RING-type; ZF_SIAH,Zinc fin,CUFF.21416.2
(313 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61790.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 466 e-131
AT4G27880.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 458 e-129
AT3G58040.1 | Symbols: SINAT2 | seven in absentia of Arabidopsis... 412 e-115
AT2G41980.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 409 e-114
AT5G53360.1 | Symbols: | TRAF-like superfamily protein | chr5:2... 343 7e-95
AT3G13672.2 | Symbols: | TRAF-like superfamily protein | chr3:4... 203 1e-52
AT3G13672.1 | Symbols: | TRAF-like superfamily protein | chr3:4... 203 2e-52
AT5G37870.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 108 5e-24
AT5G37930.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 100 1e-21
AT5G37890.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 99 4e-21
AT1G66660.2 | Symbols: | Protein with RING/U-box and TRAF-like ... 92 5e-19
AT1G66650.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 91 1e-18
AT5G37910.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 90 2e-18
AT1G66620.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 89 3e-18
AT5G62800.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 87 1e-17
AT1G66630.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 80 1e-15
AT1G66610.2 | Symbols: | TRAF-like superfamily protein | chr1:2... 66 3e-11
AT1G66610.1 | Symbols: | TRAF-like superfamily protein | chr1:2... 64 1e-10
AT1G66660.1 | Symbols: | Protein with RING/U-box and TRAF-like ... 55 7e-08
>AT3G61790.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr3:22871974-22873543 REVERSE LENGTH=326
Length = 326
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 212/251 (84%), Positives = 234/251 (93%)
Query: 22 PTATSVHEILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALE 81
PT TSVHE+LECPVCTN+MYPPIHQC NGHTLCSTCK RVHNRCPTCRQELGDIRCLALE
Sbjct: 52 PTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALE 111
Query: 82 KIAESLELPCEYRSLGCPEIFPYYRKLKHESICNFRPYNCPYTGSDCSVVGDIPHLVAHL 141
K+AESLELPC++ SLGCPEIFPYY KLKHE++CNFRPY+CPY GS+CSV GDIP LVAHL
Sbjct: 112 KVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHL 171
Query: 142 RDDHRVDMYSACTFNHRYVKANPMEVENATWMLTVFHCYGHYFCLHFEAFQLGTAPVYMA 201
RDDH+VDM+S CTFNHRYVK+NP EVENATWMLTVFHC+G YFCLHFEAFQLG APVYMA
Sbjct: 172 RDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA 231
Query: 202 FLRFMGDEREARSYSYSLEVGGSGRKLTYEGSPRSIRDSHKKVRDSHDGLVVHRNMAIFF 261
FLRFMGDE EAR+Y+YSLEVGG GRKL +EG+PRS+RDSH+KVRDSHDGL++ RNMA+FF
Sbjct: 232 FLRFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFF 291
Query: 262 SGGDSKELKLR 272
SGGD KELKLR
Sbjct: 292 SGGDRKELKLR 302
>AT4G27880.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr4:13883623-13884927 FORWARD LENGTH=327
Length = 327
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 211/256 (82%), Positives = 235/256 (91%), Gaps = 4/256 (1%)
Query: 21 GPTAT----SVHEILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIR 76
GPTAT SV+E+LECPVCT +MYPPIHQC NGHTLCSTCK RVHNRCPTCRQELGDIR
Sbjct: 48 GPTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIR 107
Query: 77 CLALEKIAESLELPCEYRSLGCPEIFPYYRKLKHESICNFRPYNCPYTGSDCSVVGDIPH 136
CLALEK+AESLELPC++ +LGCPEIFPYY KLKHES+CNFRPY+CPY GS+C +VGDIP
Sbjct: 108 CLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPF 167
Query: 137 LVAHLRDDHRVDMYSACTFNHRYVKANPMEVENATWMLTVFHCYGHYFCLHFEAFQLGTA 196
LVAHLRDDH+VDM++ TFNHRYVK+NP EVENATWMLTVFHC+G YFCLHFEAFQLG
Sbjct: 168 LVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMG 227
Query: 197 PVYMAFLRFMGDEREARSYSYSLEVGGSGRKLTYEGSPRSIRDSHKKVRDSHDGLVVHRN 256
PVYMAFLRFMGDE +ARSYSYSLEVGGSGRKLT+EG+PRSIRDSH+KVRDS+DGL++ RN
Sbjct: 228 PVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRN 287
Query: 257 MAIFFSGGDSKELKLR 272
MA+FFSGGD KELKLR
Sbjct: 288 MALFFSGGDRKELKLR 303
>AT3G58040.1 | Symbols: SINAT2 | seven in absentia of Arabidopsis 2
| chr3:21489612-21491085 FORWARD LENGTH=308
Length = 308
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 188/250 (75%), Positives = 215/250 (86%)
Query: 23 TATSVHEILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 82
+ V+E+LECPVCTN MYPPIHQC NGHTLCS CK RV N CPTCR ELG+IRCLALEK
Sbjct: 50 SNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEK 109
Query: 83 IAESLELPCEYRSLGCPEIFPYYRKLKHESICNFRPYNCPYTGSDCSVVGDIPHLVAHLR 142
+AESLE+PC Y++LGC +IFPYY KLKHE C FRPY CPY GS+CSV GDIP LV HL+
Sbjct: 110 VAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLK 169
Query: 143 DDHRVDMYSACTFNHRYVKANPMEVENATWMLTVFHCYGHYFCLHFEAFQLGTAPVYMAF 202
DDH+VDM+ CTFNHRYVK+NP EVENATWMLTVF+C+G FCLHFEAFQLG APVYMAF
Sbjct: 170 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 229
Query: 203 LRFMGDEREARSYSYSLEVGGSGRKLTYEGSPRSIRDSHKKVRDSHDGLVVHRNMAIFFS 262
LRFMGDE EA+ +SYSLEVG GRKLT++G PRSIRDSH+KVRDS DGL++ RN+A++FS
Sbjct: 230 LRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 289
Query: 263 GGDSKELKLR 272
GGD +ELKLR
Sbjct: 290 GGDRQELKLR 299
>AT2G41980.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr2:17523494-17524692 REVERSE LENGTH=305
Length = 305
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 188/260 (72%), Positives = 219/260 (84%), Gaps = 4/260 (1%)
Query: 13 SVTKLHGNGPTATSVHEILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQEL 72
S+ K H ++ V+E+LECPVCTN MYPPIHQC NGHTLCS+CK RV N CPTCR EL
Sbjct: 41 SIGKFH----SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYEL 96
Query: 73 GDIRCLALEKIAESLELPCEYRSLGCPEIFPYYRKLKHESICNFRPYNCPYTGSDCSVVG 132
G+IRCLALEK+AESLE+PC Y++LGC +IFPYY KLKHE C FR Y+CPY GS+CSV G
Sbjct: 97 GNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTG 156
Query: 133 DIPHLVAHLRDDHRVDMYSACTFNHRYVKANPMEVENATWMLTVFHCYGHYFCLHFEAFQ 192
DIP LV HL+DDH+VDM+ CTFNHRYVK+NP EVENATWMLTVF+C+G FCLHFEAFQ
Sbjct: 157 DIPTLVDHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ 216
Query: 193 LGTAPVYMAFLRFMGDEREARSYSYSLEVGGSGRKLTYEGSPRSIRDSHKKVRDSHDGLV 252
LG APVYMAFLRFMGDE EA+ +SYSLEVG RKLT++G PRSIRDSH+KVRDS DGL+
Sbjct: 217 LGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLI 276
Query: 253 VHRNMAIFFSGGDSKELKLR 272
+ RN+A++FSG D +ELKLR
Sbjct: 277 IPRNLALYFSGSDKEELKLR 296
>AT5G53360.1 | Symbols: | TRAF-like superfamily protein |
chr5:21648485-21649269 FORWARD LENGTH=233
Length = 233
Score = 343 bits (881), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 161/221 (72%), Positives = 184/221 (83%), Gaps = 7/221 (3%)
Query: 78 LALEKIAESLELPCEYRSLGCPEIFPYYRKLKHESICNFRPYNCPYTGSDCSVVGDIPHL 137
+ALEK+AESLELPC+Y +LGC IFPYY KLKHES CNFRPY+CPY GS+C+ VGDI L
Sbjct: 15 IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74
Query: 138 VAHLRDDHRVDMYSACTFNHRYVKANPMEVENATWMLTVFHCYGHYFCLHFEAFQLGTAP 197
VAHLRDDH+VDM++ CTFNHRYVK+NP EVENATWMLTVF C+G YFCLHFEAFQLG AP
Sbjct: 75 VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134
Query: 198 VYMAFLRFMGDEREARSYSYSLEVGGSGRKLTYEGSPRSIRDSHKKVRDSHDGLVVHRNM 257
VYMAFLRFMGDE +AR+Y+YSLEVGGSGRK T+EG+PRS+RDSH+KVRDSHDGL++ RNM
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194
Query: 258 AIFFSGGDSKELKLRERYGNNEPLWVEWTYP---TCIARFC 295
A+FFSGGD KELKLR +W E P CI C
Sbjct: 195 ALFFSGGDKKELKLRV----TGRIWKEQQNPDSGVCITSMC 231
>AT3G13672.2 | Symbols: | TRAF-like superfamily protein |
chr3:4473541-4474343 REVERSE LENGTH=220
Length = 220
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 122/159 (76%), Gaps = 3/159 (1%)
Query: 117 RPYNCPYTGSDCSVVGDIPHLVAHLRDDHRVDMYSACTFNHRYVKANPMEVENATWMLTV 176
+PYNCP++G+ C V GDI L+ HLR+DH V+M +F+HRYV +P + +ATWMLT+
Sbjct: 49 KPYNCPHSGAKCDVTGDIQRLLLHLRNDHNVEMSDGRSFSHRYVHHDPKHLHHATWMLTL 108
Query: 177 FHCYGHYFCLHFEAFQLGTAPVYMAFLRFMGDEREARSYSYSLEVGGSGRKLTYEGSPRS 236
C G FCL+FEAF L P+YMAF++FMGDE EA S+SYSL+VGG+GRKLT++G PRS
Sbjct: 109 LDCCGRKFCLYFEAFHLRKTPMYMAFMQFMGDEEEAMSFSYSLQVGGNGRKLTWQGVPRS 168
Query: 237 IRDSHKKVRDSHDGLVVHRNMAIFFSGGDS---KELKLR 272
IRDSHK VRDS DGL++ R +A+FFS ++ KELKL+
Sbjct: 169 IRDSHKTVRDSQDGLIITRKLALFFSTDNNTTDKELKLK 207
>AT3G13672.1 | Symbols: | TRAF-like superfamily protein |
chr3:4473541-4474343 REVERSE LENGTH=216
Length = 216
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 122/159 (76%), Gaps = 3/159 (1%)
Query: 117 RPYNCPYTGSDCSVVGDIPHLVAHLRDDHRVDMYSACTFNHRYVKANPMEVENATWMLTV 176
+PYNCP++G+ C V GDI L+ HLR+DH V+M +F+HRYV +P + +ATWMLT+
Sbjct: 45 KPYNCPHSGAKCDVTGDIQRLLLHLRNDHNVEMSDGRSFSHRYVHHDPKHLHHATWMLTL 104
Query: 177 FHCYGHYFCLHFEAFQLGTAPVYMAFLRFMGDEREARSYSYSLEVGGSGRKLTYEGSPRS 236
C G FCL+FEAF L P+YMAF++FMGDE EA S+SYSL+VGG+GRKLT++G PRS
Sbjct: 105 LDCCGRKFCLYFEAFHLRKTPMYMAFMQFMGDEEEAMSFSYSLQVGGNGRKLTWQGVPRS 164
Query: 237 IRDSHKKVRDSHDGLVVHRNMAIFFSGGDS---KELKLR 272
IRDSHK VRDS DGL++ R +A+FFS ++ KELKL+
Sbjct: 165 IRDSHKTVRDSQDGLIITRKLALFFSTDNNTTDKELKLK 203
>AT5G37870.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr5:15073764-15074851 REVERSE LENGTH=281
Length = 281
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 109/223 (48%), Gaps = 12/223 (5%)
Query: 29 EILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLE 88
+IL+CP+C A+ P+ QC NGH CS+C ++ N+CP C +G IRC A+E++ ES+
Sbjct: 41 DILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVL 100
Query: 89 LPCEYRSLGCPEIFPYYRKLKHESICNFRPYNCPYTGSDCSVVGDIPHLVAHLRDDHRVD 148
+PC Y LGC + Y R+ HE ICNF P +CP G C+ G L H H
Sbjct: 101 VPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQG--CNYTGSYKDLYEHYDLTHSTG 158
Query: 149 MYSACTFNHRYVKANPMEVENATWMLTVFHCYGHYFCLHFEAFQLGTAPVYMAFLRFMGD 208
+A +FN A M + + + V+ + FE VY++
Sbjct: 159 S-TAYSFNGVSYIAAMMFISDKILIERVYEKKLLFVVQCFEE----PCGVYVSVSCIAPS 213
Query: 209 EREARSYSYS-LEVGGSGRKLTYEGSP---RSIRDSHKKVRDS 247
E +SY L G +TY+ SP + ++ S ++ +DS
Sbjct: 214 APEVGEFSYGLLYTTWEGVTMTYQ-SPKVKKVLKVSSQRPKDS 255
>AT5G37930.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr5:15102239-15103651 REVERSE LENGTH=349
Length = 349
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 29 EILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLE 88
++L+CP+C + PI QC NGH C+ C T+V NRCP+C +G +RC A+EK+ E+
Sbjct: 109 DVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASR 168
Query: 89 LPCEYRSLGCPEIFPYYRKLKHESICNFRPYNCPYTGSDCSVVGDIPHLVAHLRDDHRVD 148
+ C GC E Y + HE +C F P +CP DC G L H+R +H+ D
Sbjct: 169 VSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPIL--DCHYTGYYKDLNNHVRAEHKDD 226
Query: 149 MYS 151
+ S
Sbjct: 227 LIS 229
>AT5G37890.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr5:15090512-15091822 REVERSE LENGTH=286
Length = 286
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 110/253 (43%), Gaps = 15/253 (5%)
Query: 29 EILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLE 88
EIL+CP+C A PI QC NGH CS+C +++N+CP C +G RC A+E + ES+
Sbjct: 47 EILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLESIL 106
Query: 89 LPCEYRSLGCPEIFPYYRKLKHESICNFRPYNCPYTGSDCSVVGDIPHLVAHLRDDHRVD 148
+PC LGC + Y ++L HE C F CP DC+ L H R H ++
Sbjct: 107 IPCPNAKLGCKKNVSYGKELTHEKECMFSHCACP--ALDCNYTSSYKDLYTHYRITH-ME 163
Query: 149 MYSACTFNHRYVKANPMEVENATWMLTVFHCYGHYFCLHFEAFQLGTAP--VYMAFLRFM 206
+ TF + M + + T H H F A Q P VY+
Sbjct: 164 INQINTFICDIPLSVRMNISKKILIRTE-HLTNHLF-----AVQCFREPYGVYVTVSCIA 217
Query: 207 GDEREARSYSYSLEVGGSGRKLTYEGSPRSIRDSHKKVRDSHDGLVVHRNMAIFFSGGDS 266
E YSY+L G + Y+ SP R + + ++ N + GD
Sbjct: 218 PSSPELSQYSYALSYTVDGHTVIYQ-SPEVKRVLKLSFQTPQENFMLIPNSLL---RGDV 273
Query: 267 KELKLRERYGNNE 279
E+++ + N E
Sbjct: 274 LEMRISVKKLNKE 286
>AT1G66660.2 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr1:24862056-24863332 REVERSE LENGTH=348
Length = 348
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 22 PTATSVHEILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALE 81
P ++L+CP C + PI+QC NGH CS+C +++ +C CR +GDIRC A+E
Sbjct: 95 PVKLQSSDVLDCPTCCEPLKRPIYQCSNGHLACSSCCQKLNKKCSFCRCNIGDIRCRAME 154
Query: 82 KIAESLELPCEYRSLGCPEIFPYYRKLKHESICNFRPYNCPYTGSDCSVVGDIPHLVAH 140
K+ E+ +PC GC E Y + HE +C F +CP S+C+ V +L +H
Sbjct: 155 KVIEASIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPV--SNCNYVSSYSNLKSH 211
>AT1G66650.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr1:24860113-24861821 REVERSE LENGTH=329
Length = 329
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 30 ILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLEL 89
+LECP C + + PI QC NGH C C ++ RC C+ +GD+RC A+EK+ ++ +
Sbjct: 83 VLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRCSFCKLPIGDVRCRAMEKVIKAGLV 142
Query: 90 PCEYRSLGCPEIFPYYRKLK-HESICNFRPYNCPYTGSDCSVVGDIPHLVAHLRDDHRVD 148
C GC + Y +L+ HE +C F P +CP DC+ +G L+ H R H+V
Sbjct: 143 SCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPI--KDCNYIGFYKDLINHFRATHKVS 200
Query: 149 MYSACTFNHRYVKANPMEVENATWMLT-VFHCYGHYFCLHFEAFQLGTAPVYMAFLRFMG 207
+F ++++++ M+ V G+ F + + F +G+ VY
Sbjct: 201 PGDINSFVFDRPVIFGLDLDSSDKMVIFVEEKQGNLFVV--QGF-IGSHGVYATVSHIAP 257
Query: 208 DEREARSYSYSL 219
E R +S SL
Sbjct: 258 MVPEVRKFSCSL 269
>AT5G37910.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr5:15096210-15097318 REVERSE LENGTH=276
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 7/205 (3%)
Query: 29 EILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLE 88
+IL+CP+C A+ PI QC NGH C +C ++ N+CP C +G R A+E + ES+
Sbjct: 34 DILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESIL 93
Query: 89 LPCEYRSLGCPEIFPYYRKLKHESICNFRPYNCPYTGSDCSVVGDIPHLVAHLRDDHRVD 148
+PC GC + F Y ++ HE C F +CP S C G L AH + H +
Sbjct: 94 IPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCP--SSVCDYTGSYKDLYAHYKLTHSTN 151
Query: 149 MY-SACTFNHRYVKANPMEVENATWMLTVFHCYGHYFCLHFEAFQLGTAPVYMAFLRFMG 207
++ + F M + + + V + L + F+ VY+
Sbjct: 152 IFWNIKRFRCANFFTTSMLISDKILIKRV---HEKKLLLAVQCFR-EPCGVYVTVSFIAP 207
Query: 208 DEREARSYSYSLEVGGSGRKLTYEG 232
E +SY L G +TYE
Sbjct: 208 SAPEVGEFSYQLSYNVDGHTVTYES 232
>AT1G66620.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr1:24852806-24854044 REVERSE LENGTH=313
Length = 313
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 7 RPHLFSSVTKLHGNGPTATSVH------EILECPVCTNAMYPPIHQCRNGHTLCSTCKTR 60
R + SSV + G A + ++L+CP+C +A+ PI QC NGH CS+C T+
Sbjct: 12 RQRVPSSVESVENGGGDAVARSGTLFELDLLDCPICCHALTSPIFQCDNGHIACSSCCTK 71
Query: 61 VHNRCPTCRQELGDIRCLALEKIAESLELPCEYRSLGCPEIFPYYRKLKHESICNFRPYN 120
+ N+CP+C +G+ R +E++ E++ + C GC E F Y ++L HE C F
Sbjct: 72 LRNKCPSCALPIGNFRSRIMERVVEAVMVTCPNVKHGCTEKFSYGKELIHEKDCRFALCY 131
Query: 121 CPYTGSDCSVVGDIPHLVAHLRDDH 145
CP +C+ G L +H +H
Sbjct: 132 CP--APNCNYSGVYKDLYSHFYVNH 154
>AT5G62800.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr5:25218663-25219967 FORWARD LENGTH=348
Length = 348
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 29 EILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPT--CRQELGDIRCLALEKIAES 86
++L+CPVC + P QC +GH +C+ C +V N+CP C +G+ RC A+E++ ES
Sbjct: 39 DVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLES 98
Query: 87 LELPCEYRSLGCPEIFPYYRKLKHESICNFRPYNCPYTGSDCSVVGDIPHLVAHLRDDHR 146
+PC+ GC + Y + HE CN+ +CP +C+ G + H H
Sbjct: 99 AFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCP--NLECNYTGSYNIIYGHFMRRH- 155
Query: 147 VDMYSACTFNHRY------VKANPMEVENATW-----MLTVFHCYGHYFCLHFEAFQLGT 195
+Y++ + ++ V N E + W +L V C+
Sbjct: 156 --LYNSTIVSSKWGYSTVDVLINIKEKVSVLWESRQKLLFVVQCFKE------------R 201
Query: 196 APVYMAFLRFMGDEREARSYSYSLEVGGSGRKLTYEG 232
VY+ R E + +SY L G +TYE
Sbjct: 202 HGVYVTVRRIAPPASEFKKFSYRLSYSIDGHNVTYES 238
>AT1G66630.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr1:24855479-24856714 REVERSE LENGTH=303
Length = 303
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 29 EILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLE 88
++L+CP+C + + PI+QC NGH CS+C +V +CP C +G R LEKI E++
Sbjct: 45 DLLDCPICYHKLGAPIYQCDNGHIACSSCCKKVKYKCPYCSLRIGFFRSRILEKIVEAVV 104
Query: 89 LPCEYRSLGCPEIFPYYRKLK--HESICNFRPYNCPYTGSDCSVVGDIPHLVAHLRDDHR 146
+ C GC E PY + + HE +C F CP +C G L H +H+
Sbjct: 105 VSCPNAKYGCTEKIPYDNESESAHERVCEFTLCYCP--EPECKYTGVYTDLYRHYHAEHK 162
Query: 147 VD 148
D
Sbjct: 163 TD 164
>AT1G66610.2 | Symbols: | TRAF-like superfamily protein |
chr1:24850221-24851450 REVERSE LENGTH=237
Length = 237
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 22 PTAT-SVHEILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLAL 80
P+ T S ++L+CPVC+ A+ I QC NGH CS+C + +CP+C +G+ RC+ +
Sbjct: 149 PSGTLSQLDLLDCPVCSKALKISIFQCDNGHVACSSCCIELRYKCPSCSLPIGNYRCIIM 208
Query: 81 EKIAESLELPCE 92
EK+ +++ +PC+
Sbjct: 209 EKVVKAIIVPCQ 220
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 29 EILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLE 88
++L+CP+C NA+ PI QC GH CS+C T V N+CP C +G+ R +E++ E+
Sbjct: 52 DLLDCPICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRSRIMERVVEAFI 111
Query: 89 LPC 91
+ C
Sbjct: 112 VRC 114
>AT1G66610.1 | Symbols: | TRAF-like superfamily protein |
chr1:24849716-24851450 REVERSE LENGTH=366
Length = 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 29 EILECPVCTNAMYPPIHQCRNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLE 88
++L+CP+C NA+ PI QC GH CS+C T V N+CP C +G+ R +E++ E+
Sbjct: 52 DLLDCPICCNALTIPIFQCDKGHIACSSCCTNVSNKCPYCSLAIGNYRSRIMERVVEAFI 111
Query: 89 LPC 91
+ C
Sbjct: 112 VRC 114
>AT1G66660.1 | Symbols: | Protein with RING/U-box and TRAF-like
domains | chr1:24862056-24863028 REVERSE LENGTH=224
Length = 224
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 62 HNRCPTCRQELGDIRCLALEKIAESLELPCEYRSLGCPEIFPYYRKLKHESICNFRPYNC 121
H+R + R +GDIRC A+EK+ E+ +PC GC E Y + HE +C F +C
Sbjct: 11 HSRDQSIRCNIGDIRCRAMEKVIEASIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSC 70
Query: 122 PYTGSDCSVVGDIPHLVAH 140
P S+C+ V +L +H
Sbjct: 71 PV--SNCNYVSSYSNLKSH 87