Miyakogusa Predicted Gene
- Lj0g3v0316749.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0316749.1 Non Chatacterized Hit- tr|G8A2Y6|G8A2Y6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,69.42,0,coiled-coil,NULL; seg,NULL,CUFF.21415.1
(1196 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61780.1 | Symbols: emb1703 | embryo defective 1703 | chr3:22... 785 0.0
AT5G28400.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 243 7e-64
AT5G28320.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 204 4e-52
AT4G15820.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 76 1e-13
>AT3G61780.1 | Symbols: emb1703 | embryo defective 1703 |
chr3:22867814-22871462 REVERSE LENGTH=1121
Length = 1121
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/1156 (43%), Positives = 694/1156 (60%), Gaps = 127/1156 (10%)
Query: 46 FRTLAQFGRPTNRRNSLRKKLLQDQQVSTNHIPTDPSSVNGVEESDTGFQGXXXXXXXXX 105
R A+FG + RRNSLRKK++ D+ + ++P + E G
Sbjct: 46 LRVSARFGETSRRRNSLRKKIIGDEYWRSTPKSSEPGTKPLNESHKFGH-----CDDLSS 100
Query: 106 XEKPKSKVLGESVLLSKLENWVEQFKEDNGYWGIGSGPIFTVYQDSSGAVKSVSIDEDEI 165
E K +V +S LL++LE+WV ++ ++ +WGIGS PIFTVYQDS G V+ V +DEDE+
Sbjct: 101 TEGLKDRVAQDSNLLNELEDWVARYNKEAEFWGIGSNPIFTVYQDSVGNVEKVEVDEDEV 160
Query: 166 LLRCRVGRGVIEDSPEVGSKIMEAKNLAREMETGNNVIARNSSVAKFVVQGEEEGG---F 222
L R R G +E V SK++ AK LA +ME G +VI + SS+ KFV
Sbjct: 161 LSRRRSALGDLES---VSSKLVYAKKLAEQMENGEHVIHKESSLVKFVSSSSSSEEEFRL 217
Query: 223 VKAIRGFVVQPRLLPKLSGNGGKVLCVLVVLWAVKKLFAF-GDKEARHTEMEKEMMRRKI 281
V +++ +++ L+PKL G VLC + LW +K + + E TE+EKEMMRRK+
Sbjct: 218 VSSVQNAILRLDLIPKLPAIGRAVLCGYIGLWLLKTVLVYRKSNEVECTELEKEMMRRKM 277
Query: 282 KARKERGVLAKGVVEVI-PEPSETPVVNIKKPTLDKEQLKNNILKAKASTDKL-LVQDSS 339
KA +ER + KG VEV+ E E P+++ +KP D+ +L +I K K S KL LV
Sbjct: 278 KAWQERDMSEKGTVEVLHKEGLEKPLMSFEKPKFDRNELMTSISKVKGSEKKLELVNSPH 337
Query: 340 AEVRTGSMDMDNKVQEIREMARQAREIEGRDRSLVSRDMEMNDPVIEKPSHEIEVIRKDN 399
E +D +K+ EI+ MAR+AREIE +E+N EK ++ DN
Sbjct: 338 VE-----LDFVDKIHEIKAMARRAREIEA--------GIELN----EKQKLDVNKETGDN 380
Query: 400 KQDNSLSD-----HQNKVARETTDNNAILMTSAVDV--TE--KIDNPILH-EVVPFDESN 449
++D S+ H+ E D+ + ++ D TE P+L+ +V F N
Sbjct: 381 EEDISIQSQKSLPHEALTHSEGDDDKDERLGTSTDSENTELSGFAVPMLNGAMVDFGFLN 440
Query: 450 LYASDGDREINKHVVKTTENAVHLKDREDSKSSNTHINGSSVTDGSSTDKKPRIIRSVKE 509
+ D+E +VV ++ + SK + + +ST +K R+IRSVKE
Sbjct: 441 HEMAASDKEKVSNVVPPVPTDGVIQSSDVSKDQLSMMK-------NSTGRKSRVIRSVKE 493
Query: 510 ARDYLSKRHDKLDPDTGPKIEPVKENIADLKSSSVIDFNDQRYQNLEMNTIVSKSETFKE 569
A+++LS+R +G K E +E + SV F+ Q + E + K E +
Sbjct: 494 AKEFLSRR-------SGEK-ELTQEPSQMIAQDSVEIFSKQ---SDEERGVARKHELVDK 542
Query: 570 ISDFKPAINGSEGSNHKDMELSPTKNDCL-KDSGIEPGLDDLQKSETTLDDKVDGPGMEK 628
A+NG+ S L T ++ L KD+ +P +D QK + PG
Sbjct: 543 NKILGAAVNGTLKS-----ALESTSSEPLGKDADCQPQKNDYQK--------LSEPG--- 586
Query: 629 NIPEVEPVIKQIRSDAFNGISDSKPSINPSEDSNQKDVEFGSTKDDYFEDSGVELGVGDL 688
N + S IN S + + +F + SG G +
Sbjct: 587 -----------------NAVKGSSKQINSSNKIEEHNFKFAKS------SSG---GTEHI 620
Query: 689 QKSESSLDHEVNGVNTANRLSGKTENWLEENFHEVEPIIKQIRAGFRDNYMEARERVDQP 748
+K E S GK NW+E N+HE EP+++++RAGFRDNYM ARE +
Sbjct: 621 EKEEPS---------------GKG-NWIENNYHEFEPVVEKMRAGFRDNYMAAREGETRE 664
Query: 749 LDIPTEMESLGVVEDGGELDWMQDDHLRDIVFRVRENELSGRDPFYSMSAGDKEAFFRGL 808
E+ L E EL+WM+D+ LRDIVF VR+NEL+GRDPF+ + DK F +GL
Sbjct: 665 PGTIAEIAELYRSEYNDELEWMKDEKLRDIVFHVRDNELAGRDPFHLIDDEDKAMFLQGL 724
Query: 809 EKNVEKENRKLSHLHEWLHSNIENLDYGADGISIYDPPEKIIPRWKGPPVEQIPQVLNEF 868
EK VEKEN KLSHLH+W+HSNIENLDYG DG+S+YDP EKIIPRWKGP +++ P+ LN +
Sbjct: 725 EKKVEKENEKLSHLHQWIHSNIENLDYGVDGVSVYDPLEKIIPRWKGPSLDKNPEFLNNY 784
Query: 869 LDKRKA---NSTRNMKPVMKDENSSAKKSADSSLQGKKNDSIAPITKLKN--PKTVIEXX 923
++R+A ++ PV +E SS ++ ++S+ +++ P +++ + PK V+E
Sbjct: 785 HEQREALFSEKAASVSPVKYEEQSSHQELSESA---SSENTLTPSSEITSSQPKIVVEGS 841
Query: 924 XXXXXXXXXXXXEYWQHTKKWSQGFLDSYNAETDPEIKSTMKDIGKDLDRWITEKEIEEA 983
EYWQHTKKWS+GFL+ YNAETDPE+K+ M+D+GKDLDRWITE EI++A
Sbjct: 842 DGSVRPGKKSGKEYWQHTKKWSRGFLELYNAETDPEVKAVMRDMGKDLDRWITEDEIKDA 901
Query: 984 AELMDKLPDRNKSFVEKKLNKLKREMELYGPQAVVSKYREYADDKEEDYLWWLDLPYVLC 1043
A++M+KLP+RNK F+EKKLNKLKREMEL+GPQAV+SKYREY +DKEEDYLWWLDLP+VLC
Sbjct: 902 ADIMEKLPERNKKFMEKKLNKLKREMELFGPQAVLSKYREYGEDKEEDYLWWLDLPHVLC 961
Query: 1044 IEMYTIDD-GEQRVGFYSLEMAEDLELEPKPYHVIAFQDPGDCKSLCYIIQAHMDMLGNG 1102
+E+YT+D+ GEQ+VGFY+LEMA DLELEPKP+HVIAF+D DC++LCYIIQAH+DML +G
Sbjct: 962 LELYTVDENGEQQVGFYTLEMATDLELEPKPHHVIAFEDAADCRNLCYIIQAHLDMLRSG 1021
Query: 1103 NAFVVAQPPKDAFRDAKANGFGVTVIKKGELQLNIDQPLEEVEEQIKEIGSKVYHDTITK 1162
N F+V +PPKDA+R+AKANGFGVTVI+KGEL+LNID+PLEEVEE+I EIGSK+YHD I
Sbjct: 1022 NVFIVPRPPKDAYREAKANGFGVTVIRKGELKLNIDEPLEEVEEEICEIGSKMYHDKIMG 1081
Query: 1163 ERSVDINSLMKGVFGL 1178
ERSVDI+SLMKGVF L
Sbjct: 1082 ERSVDISSLMKGVFNL 1097
>AT5G28400.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G28320.1); Has
2580 Blast hits to 2028 proteins in 270 species: Archae -
20; Bacteria - 158; Metazoa - 939; Fungi - 198; Plants -
144; Viruses - 14; Other Eukaryotes - 1107 (source: NCBI
BLink). | chr5:10344024-10348234 REVERSE LENGTH=973
Length = 973
Score = 243 bits (619), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 131/258 (50%), Positives = 179/258 (69%), Gaps = 25/258 (9%)
Query: 766 ELDWMQDDHLRDIVFRVRENELSGRDPFYSMSAGDKEAFFRGLEKNVEKENRKLSHLHEW 825
EL+WM+D+ LRDIVF VR+NEL+GRDP + + A DK F + LEK VEKEN KLSHLH
Sbjct: 589 ELEWMKDEKLRDIVFCVRDNELAGRDPSHLIDAEDKAIFLQSLEKKVEKENEKLSHLHH- 647
Query: 826 LHSNIENLDYGADGISIYDPPEKIIPRWKGPPVEQIPQVLNEFLDKRKA---NSTRNMKP 882
+YDP EKIIPRWKGP +++ P+ LN + ++R+A ++ P
Sbjct: 648 ----------------VYDPLEKIIPRWKGPSLDKNPEFLNNYHEQREALFSGKAASVSP 691
Query: 883 VMKDENSSAKKSADSSLQGKKNDSIAPITKLKN--PKTVIEXXXXXXXXXXXXXXEYWQH 940
V +E SS ++ ++S+ +++ P +++ + PK V+E EYWQH
Sbjct: 692 VKYEEQSSHQELSESA---SSENTLTPSSEITSSQPKIVVEGSDGSVRPGKKSGKEYWQH 748
Query: 941 TKKWSQGFLDSYNAETDPEIKSTMKDIGKDLDRWITEKEIEEAAELMDKLPDRNKSFVEK 1000
TKKWS+GFL+ YNAETDPE+K+ M+D+GKDLDRWITE EI++AA++M+KLP+RNK F+EK
Sbjct: 749 TKKWSRGFLELYNAETDPEVKAVMRDMGKDLDRWITEDEIKDAADIMEKLPERNKKFMEK 808
Query: 1001 KLNKLKREMELYGPQAVV 1018
KLNKLKREMEL+GPQAV+
Sbjct: 809 KLNKLKREMELFGPQAVM 826
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 203/410 (49%), Gaps = 65/410 (15%)
Query: 136 YWGIGSGPIFTVYQDSSGAVKSVSIDEDEILLRCRVGRGVIEDSPEVGSKIMEAKNLARE 195
Y GI S PIFTVY DS G V V +DEDE+L R R G ++D V SK++ AK LA +
Sbjct: 90 YCGICSNPIFTVYLDSVGNVAKVEVDEDEVLSRRRSG---LDDLESVSSKLVYAKKLAEQ 146
Query: 196 METGNNVIARNSSVAKFVVQGEEEGG-----FVKAIRGFVVQPRLLPKLSGNGGKVLCVL 250
ME G V +++S+ KFV FV +I+ +++ L+PKL G +L
Sbjct: 147 MENGEYVTHKDTSLLKFVSSSSSSSSEEEFRFVSSIQNAILRLDLIPKLPAIGRALLFGY 206
Query: 251 VVLWAVKKLFAF-GDKEARHTEMEKEMMRRKIKARKERGVLAKGVVEVI-PEPSETPVVN 308
+ LW +K + + E TE+EKEMMRRK+KA +ER + KG VEV+ E E P+++
Sbjct: 207 IGLWLLKTVLVYRKSNEVECTELEKEMMRRKMKAWEERDMSEKGTVEVLHKEGLEKPLMS 266
Query: 309 IKKPTLDKEQLKNNILKAKASTDKL-LVQDSSAEVRTGSMDMDNKVQEIREMARQAREIE 367
+KP D+ +L ++I K K S KL LV S E +D D+K+ EI+ MAR+AREIE
Sbjct: 267 FEKPKFDRNELMSSISKVKGSEKKLELVNSSHVE-----LDFDDKIHEIKVMARRAREIE 321
Query: 368 GRDRSLVSRDMEMNDPVIEKPSHEIEVIRKDNKQDNSLS-----------------DHQN 410
+E+N EK ++ D+ +D S+ D
Sbjct: 322 A--------GIELN----EKEKRDVNKETGDSDEDISIQSQKSLPHDGLTHSVGDDDKDE 369
Query: 411 KVARETTDNNAILMTSAVDVTEKIDNPILHEVV---PFDESNLYASDGDREINKHVVKTT 467
++ T N L AV P+L+ + F + ASD + N + T
Sbjct: 370 RLGTSTDSENTELSAFAV--------PMLNGAMVDSGFPNHEMAASDKKKVSNVVPLVPT 421
Query: 468 ENAVHLKDREDSKSSNTHINGSSVTDGSSTDKKPRIIRSVKEARDYLSKR 517
+ + D + S +ST +K R+IRSVKEA+++LS+R
Sbjct: 422 DGVIQASDVTKDQLSMMK---------NSTGRKSRVIRSVKEAKEFLSRR 462
>AT5G28320.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G28400.1); Has
1861 Blast hits to 1522 proteins in 246 species: Archae -
19; Bacteria - 134; Metazoa - 673; Fungi - 145; Plants -
123; Viruses - 8; Other Eukaryotes - 759 (source: NCBI
BLink). | chr5:10301936-10306142 FORWARD LENGTH=927
Length = 927
Score = 204 bits (518), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 186/349 (53%), Gaps = 73/349 (20%)
Query: 766 ELDWMQDDHLRDIVFRVRENELSGRDPFYSMSAGDKEAFFRGLEKNVEKENRKLSHLHEW 825
EL+WM+D+ LRDIVF VR+NEL
Sbjct: 559 ELEWMKDEKLRDIVFCVRDNEL-------------------------------------- 580
Query: 826 LHSNIENLDYGADGISIYDPPEKIIPRWKGPPVEQIPQVLNEFLDKRKA---NSTRNMKP 882
ADG+S+YDP EKIIPRWKGP +++ P+ LN + ++R+A ++ P
Sbjct: 581 -----------ADGVSVYDPLEKIIPRWKGPSLDKNPEFLNNYHEQREALFSGKAASVSP 629
Query: 883 VMKDENSSAKKSADSSLQGKKNDSIAPITKLKN--PKTVIEXXXXXXXXXXXXXXEYWQH 940
V +E SS ++ ++S+ +++ P +++ + PK V+E EYWQH
Sbjct: 630 VKYEEQSSHQELSESA---SSENTLTPSSEITSSQPKIVVEGSDGSVRPGKKSGKEYWQH 686
Query: 941 TKKWSQGFLDSYNAETDPEIKSTMKDIGKDLDRWITEKEIEEAAELMDKLPDRNKSFVEK 1000
TKKWS+GFL+ YNAETDPE+K+ M+D+GKDLDRWITE EI++AA++M+KLP+RNK F+EK
Sbjct: 687 TKKWSRGFLELYNAETDPEVKAVMRDMGKDLDRWITEDEIKDAADIMEKLPERNKKFMEK 746
Query: 1001 KLNKLKREMELYGPQAVVSKYREYADDKEEDYLWWLDLPYVLCIEMYTIDDGEQRVGFYS 1060
KLNKLKREMEL+ YA D D L+ + ++ ++ + GF
Sbjct: 747 KLNKLKREMELFVRAGT------YARDA--DCLFLTEKSLLMLSVLFKVYGAMVDSGFPE 798
Query: 1061 LEM-AEDLE----LEPK-PYHVIAFQDPGDCKSLCY--IIQAHMDMLGN 1101
E+ A D E L P P H I + +C I ++D +GN
Sbjct: 799 HEIAASDKEKVSNLVPLVPTHGIIQSSEAEYCGICSNPIFTVYLDSVGN 847
Score = 124 bits (310), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 206/463 (44%), Gaps = 110/463 (23%)
Query: 110 KSKVLGESVLLSKLENWVEQFKED-----NGYWGIGS---------GPIFTVYQDSSGAV 155
K +V +S LL++LE+W + ED G+G I+ Y + A+
Sbjct: 35 KDRVAHDSNLLNELEDWKVEVNEDEILSRRRRSGLGDLELVMFSQLVKIYLNYHEQREAL 94
Query: 156 KS---------------VSIDEDEILLRCRVGRGVIEDSPEVGSKIMEAKNLAREMETGN 200
S + +DEDE+L R R G ++D V SK++ AK LA +ME G
Sbjct: 95 FSGKAASVPPVKYEEQGIVVDEDEVLSRRRSG---LDDLESVSSKLVYAKKLAEQMENGE 151
Query: 201 NVIARNSSVAKFVVQGEEEGG----FVKAIRGFVVQPRLLPKLSGNGGKVLCVLVVLWAV 256
V +++S+ KFV FV +I+ +++ L+PKL G
Sbjct: 152 YVTHKDTSLLKFVSSSSSSSEEEFRFVSSIQNAILRLDLIPKLPAIGR------------ 199
Query: 257 KKLFAFGDKEARHTEMEKEMMRRKIKARKERGVLAKGVVEVI-PEPSETPVVNIKKPTLD 315
E TE+EKEMMRRK+KA +ER + KG VEV+ E E P+++ +KP D
Sbjct: 200 ------ASNEVECTELEKEMMRRKMKAWEERDMSEKGTVEVLHKEGLEKPLMSFEKPKFD 253
Query: 316 KEQLKNNILKAKASTDKL-LVQDSSAEVRTGSMDMDNKVQEIREMARQAREIEGRDRSLV 374
+ +L ++I K K S KL LV S E +D D+K+ EI+ MAR+AREIE
Sbjct: 254 RNELMSSISKVKGSEKKLELVNSSHVE-----LDFDDKIHEIKVMARRAREIEA------ 302
Query: 375 SRDMEMNDPVIEKPSHEIEVIRKDNKQDNSLS-----------------DHQNKVARETT 417
+E+N EK ++ D+ +D S+ D ++ T
Sbjct: 303 --GIELN----EKEKRDVNKETGDSDEDISIQSQKSLPHDGLTHSEGDDDKDERLGTSTD 356
Query: 418 DNNAILMTSAVDVTEKIDNPILHEVV---PFDESNLYASDGDREINKHVVKTTENAVHLK 474
N L AV P+L+ + F + ASD + N + T+ +
Sbjct: 357 SENTELSAFAV--------PMLNGAMVDSGFPNHEMAASDKKKVSNVVPLVPTDGVIQAS 408
Query: 475 DREDSKSSNTHINGSSVTDGSSTDKKPRIIRSVKEARDYLSKR 517
D + S +ST +K R+IRSVKEA+++LS+R
Sbjct: 409 DVTKDQLSMMK---------NSTGRKSRVIRSVKEAKEFLSRR 442
>AT4G15820.1 | Symbols: | BEST Arabidopsis thaliana protein match is:
embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast
hits to 443 proteins in 102 species: Archae - 0; Bacteria
- 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses -
3; Other Eukaryotes - 232 (source: NCBI BLink). |
chr4:8992970-8995022 FORWARD LENGTH=460
Length = 460
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 68/122 (55%)
Query: 1030 EDYLWWLDLPYVLCIEMYTIDDGEQRVGFYSLEMAEDLELEPKPYHVIAFQDPGDCKSLC 1089
E+ LWWL LPYVL I M + D + G+++L + E + H+IAF+D D ++
Sbjct: 334 ENKLWWLKLPYVLRILMRSNIDQDISEGYFTLRTESMEQNEGQVSHMIAFEDQSDARNFS 393
Query: 1090 YIIQAHMDMLGNGNAFVVAQPPKDAFRDAKANGFGVTVIKKGELQLNIDQPLEEVEEQIK 1149
Y++++ + L + +A + KD + + + G V V++K +L L QP E+VE ++
Sbjct: 394 YLLESVFEDLDDFSADIAPVTTKDLYDEVSSGGKNVIVVRKRQLTLYAGQPFEDVERALR 453
Query: 1150 EI 1151
+
Sbjct: 454 TL 455