Miyakogusa Predicted Gene
- Lj0g3v0315179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0315179.1 tr|G7L1F1|G7L1F1_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_7g075820 PE=4 SV=1,31.13,5e-19,domain in
FBox and BRCT domain containing pl,FBD; no description,NULL; FAMILY
NOT NAMED,NULL; seg,NU,gene.g24552.t1.1
(247 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 70 2e-12
AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 70 2e-12
AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 69 3e-12
AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 69 3e-12
AT4G10420.1 | Symbols: | FBD / Leucine Rich Repeat domains cont... 68 7e-12
AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 66 2e-11
AT3G54910.3 | Symbols: | RNI-like superfamily protein | chr3:20... 63 2e-10
AT3G54910.2 | Symbols: | RNI-like superfamily protein | chr3:20... 63 2e-10
AT3G54910.1 | Symbols: | RNI-like superfamily protein | chr3:20... 63 2e-10
AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 60 1e-09
AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 55 5e-08
AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 6e-08
AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 8e-08
AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 8e-08
AT5G56452.1 | Symbols: | FBD-like domain family protein | chr5:... 54 9e-08
AT5G56452.2 | Symbols: | FBD-like domain family protein | chr5:... 54 9e-08
AT3G52690.1 | Symbols: | RNI-like superfamily protein | chr3:19... 53 2e-07
AT5G56800.1 | Symbols: | Protein with RNI-like/FBD-like domains... 53 2e-07
AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 3e-07
AT3G50710.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 4e-07
AT3G26920.2 | Symbols: | FBD / Leucine Rich Repeat domains cont... 52 4e-07
AT5G56400.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 51 9e-07
AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT5G56570.1 | Symbols: | Leucine-rich repeat (LRR) family prote... 49 4e-06
AT1G51055.1 | Symbols: | FBD-like domain family protein | chr1:... 48 7e-06
AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD (Inter... 47 8e-06
AT5G38580.1 | Symbols: | FBD-like domain family protein | chr5:... 47 9e-06
>AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 120/300 (40%), Gaps = 55/300 (18%)
Query: 2 ISLNCCIFSCTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPI 61
I L C+F+C+TL VLKL+ I HL VK+ Q+L + C
Sbjct: 122 IRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSS 181
Query: 62 LQDLKAHDIDYDQ--------------------------QDTFCVEE------------- 82
L+DL D D F ++
Sbjct: 182 LEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDTPKLKRVDIEDYWG 241
Query: 83 ----IKSLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKFPKVEVVPE---FPNLMHMN 135
I+++P+++ A++ + + L ++ +V+ L++ P F L+H+
Sbjct: 242 GFCYIENMPEVVEANVDVIYKNTEKLLGSITSVKRLALCLITSDAAYPAGTIFSQLVHLE 301
Query: 136 LHLLS---WDSVYKMLKNSPKLQVFEVVSNGGSFVPDPHI------VPECLTSQFRKCSV 186
L + WD + +++++SPKL+V ++ P P +P+CL
Sbjct: 302 LCTCAPRWWDLLTRLIEDSPKLRVLKLRQKHIRRAPSPRASWKQPALPKCLLFHLETFKW 361
Query: 187 EYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRRSALCELSF 246
E Y G+ + A +I++++ L+T +I P K E+ +L+S R S+ CEL F
Sbjct: 362 ELYEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEMLKDLSSSPRGSSTCELLF 421
>AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 120/300 (40%), Gaps = 55/300 (18%)
Query: 2 ISLNCCIFSCTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPI 61
I L C+F+C+TL VLKL+ I HL VK+ Q+L + C
Sbjct: 122 IRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSS 181
Query: 62 LQDLKAHDIDYDQ--------------------------QDTFCVEE------------- 82
L+DL D D F ++
Sbjct: 182 LEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDTPKLKRVDIEDYWG 241
Query: 83 ----IKSLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKFPKVEVVPE---FPNLMHMN 135
I+++P+++ A++ + + L ++ +V+ L++ P F L+H+
Sbjct: 242 GFCYIENMPEVVEANVDVIYKNTEKLLGSITSVKRLALCLITSDAAYPAGTIFSQLVHLE 301
Query: 136 LHLLS---WDSVYKMLKNSPKLQVFEVVSNGGSFVPDPHI------VPECLTSQFRKCSV 186
L + WD + +++++SPKL+V ++ P P +P+CL
Sbjct: 302 LCTCAPRWWDLLTRLIEDSPKLRVLKLRQKHIRRAPSPRASWKQPALPKCLLFHLETFKW 361
Query: 187 EYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRRSALCELSF 246
E Y G+ + A +I++++ L+T +I P K E+ +L+S R S+ CEL F
Sbjct: 362 ELYEGSQKQKEVATFILKHAIRLKTAIISPKPTSTLLEKHEMLKDLSSSPRGSSTCELLF 421
>AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 123/295 (41%), Gaps = 59/295 (20%)
Query: 4 LNCCIFSCTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPILQ 63
L +++C +LV+LKL G L+ V++ + +L L CP+L+
Sbjct: 121 LPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLE 180
Query: 64 DL----KAHD--------------------------ID---------YDQQDTFCVEEIK 84
DL HD ID D+ D I+
Sbjct: 181 DLVVNLSHHDNMGKLTVIVPSLQRLSLSTPSSREFVIDTPSLLSFQLVDRNDNSHTFLIE 240
Query: 85 SLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKFPKVEVVPEFPNLMHMNL------HL 138
++PKL A ++ + DI + ++ +V+ L+I+ F +L + L +L
Sbjct: 241 NMPKLREAYINVPFADIKSLIGSITSVKRLAISSEVGYGEGFIFNHLEELTLWNKYSSNL 300
Query: 139 LSWDSVYKMLKNSPKLQVFEVVSN-------GGSFVPDPHIVPECLTSQFRKCSVEYYNG 191
L W LKNSP L+ +VS G P IVPEC+ S +K + Y G
Sbjct: 301 LVW-----FLKNSPNLRELMLVSETDDHENLGMLSWNQPSIVPECMLSSLQKFTWFKYLG 355
Query: 192 TPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRRSALCELSF 246
P + A YI++N+ L+T I S L ++L E+ TEL + S+ CEL+F
Sbjct: 356 RPQDRDIAVYILKNACRLRTATIKSDTRLFTKL--EMITELRLSSQASSTCELNF 408
>AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 123/295 (41%), Gaps = 59/295 (20%)
Query: 4 LNCCIFSCTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPILQ 63
L +++C +LV+LKL G L+ V++ + +L L CP+L+
Sbjct: 121 LPSSLYTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLE 180
Query: 64 DL----KAHD--------------------------ID---------YDQQDTFCVEEIK 84
DL HD ID D+ D I+
Sbjct: 181 DLVVNLSHHDNMGKLTVIVPSLQRLSLSTPSSREFVIDTPSLLSFQLVDRNDNSHTFLIE 240
Query: 85 SLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKFPKVEVVPEFPNLMHMNL------HL 138
++PKL A ++ + DI + ++ +V+ L+I+ F +L + L +L
Sbjct: 241 NMPKLREAYINVPFADIKSLIGSITSVKRLAISSEVGYGEGFIFNHLEELTLWNKYSSNL 300
Query: 139 LSWDSVYKMLKNSPKLQVFEVVSN-------GGSFVPDPHIVPECLTSQFRKCSVEYYNG 191
L W LKNSP L+ +VS G P IVPEC+ S +K + Y G
Sbjct: 301 LVW-----FLKNSPNLRELMLVSETDDHENLGMLSWNQPSIVPECMLSSLQKFTWFKYLG 355
Query: 192 TPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRRSALCELSF 246
P + A YI++N+ L+T I S L ++L E+ TEL + S+ CEL+F
Sbjct: 356 RPQDRDIAVYILKNACRLRTATIKSDTRLFTKL--EMITELRLSSQASSTCELNF 408
>AT4G10420.1 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr4:6453085-6454209 REVERSE
LENGTH=322
Length = 322
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 117/292 (40%), Gaps = 55/292 (18%)
Query: 8 IFSCTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPILQDLKA 67
+++C +LV+LKL G L+ V + + ++L L CP+L+DL
Sbjct: 32 LYTCKSLVILKLNGGILMDVPRMVCLPSLKTLVLKGVNYFKQESLQRLLSNCPVLEDLVV 91
Query: 68 ----HD------------------IDYDQQ-DTFCVEE-------------------IKS 85
HD I Y + D F ++ I++
Sbjct: 92 NLCHHDNMGKFIVIVPSLQRLSLYIGYKRVLDEFVIDTPSLEYFKLVDRNYDSHPCLIEN 151
Query: 86 LPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKFPKVEVVPEFPNLMHMNLHLLSWDS-- 143
+PKL A + + D+ + ++ +V+ L I+ F L + LH+L +
Sbjct: 152 MPKLTEAYVDVRSTDLQSLIGSITSVKRLIISSKAMFGDGYIFNRLERLTLHVLEENPSN 211
Query: 144 -VYKMLKNSPKLQVFEVVSN------GGSFVP--DPHIVPECLTSQFRKCSVEYYNGTPS 194
+ + LK+SP LQ E S P P IVPECL S +K + Y G
Sbjct: 212 LLSQFLKDSPNLQELEYFSELDDSYENMRMFPWNQPSIVPECLLSSLQKFTWSQYLGRTQ 271
Query: 195 ELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRRSALCELSF 246
+ A YI++N+ L+ I S L ELK + EL R S CEL+F
Sbjct: 272 DRDIAVYILKNACCLRNATIDSYTCLVPELK--MIKELTRSSRASTTCELNF 321
>AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22976334-22977838
FORWARD LENGTH=435
Length = 435
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 120/290 (41%), Gaps = 57/290 (19%)
Query: 11 CTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPILQDLK--AH 68
C TLVV+KL+ HL +VK++ ++ T L CP+L+DL
Sbjct: 135 CQTLVVMKLQDKVLVDVSFPVCFRSLKSLHLTRVKYSCRESFTTLLSACPVLEDLDLFIG 194
Query: 69 DIDYDQQDTFCVEEIKSLPKLLTADLHYQW----FDIYIP----LKAVCNV--------- 111
+ YD ++F + + SL +L D Y++ F+I +P LK C
Sbjct: 195 RVHYDCLNSFTIW-VPSLQRLSICDESYRFRSTTFEISVPSLKYLKIACQDSCFKFVEDM 253
Query: 112 -------------EYLSITKF-PKVEVVPE-------FPNLMHMNLHL---LSWDSVYKM 147
E ++ +F VE + + F L+++ LHL L+ D + +
Sbjct: 254 PNLVEAHVEANQHETKNLLRFLTSVERLKDPDLTDRIFHQLLYLELHLHKRLNGDRILSL 313
Query: 148 LKNSPKLQVFEVVSNGGSFVPD--------PHIVPECLTSQFRKCSVEYYNGTPSELRFA 199
LK+SP LQ ++ + D P+ VPECLT + Y G P + A
Sbjct: 314 LKHSPNLQTLKLNEKPLRSIKDQPNISVRKPNSVPECLTFHLETLEWQGYAGRPEDKEIA 373
Query: 200 KYIMENSTTLQTMMI----CSMPILASELKD-ELFTELASCQRRSALCEL 244
YI+ N+ L T I S + KD ++ EL S + S C+L
Sbjct: 374 VYILGNALRLNTATISRYFSSSRFRHHQKKDLKIVEELKSITKASTSCQL 423
>AT3G54910.3 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 70 IDYDQQDTFCVEEIKSLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKFPKVEVVPEFP 129
ID++ + +C+ +K++P L+ AD+ + I + ++ +V+ LSI + F
Sbjct: 191 IDHNSKSHYCL--VKNMPNLIEADIDVELHSIKSLIGSITSVKRLSICSQAMYDGGFVFN 248
Query: 130 NLMHMNL-----HLLSWDSVYKMLKNSPKLQVFEVV------SNGGSFVPDPHIVPECLT 178
L H+ L H S D + ++LK+S LQ ++ ++ + P VPEC+
Sbjct: 249 QLKHLKLCRCKGH--SSDLLVRLLKDSSNLQALDLSEMDYHENHDILYWHQPSTVPECML 306
Query: 179 SQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRR 238
+ ++ Y GTP E A Y ++N+ L+T I S + + + ++ ELA R
Sbjct: 307 LSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKS--CVFDDERFDMLKELALSSRA 364
Query: 239 SALCELSF 246
S C+L F
Sbjct: 365 STTCQLVF 372
>AT3G54910.2 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 70 IDYDQQDTFCVEEIKSLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKFPKVEVVPEFP 129
ID++ + +C+ +K++P L+ AD+ + I + ++ +V+ LSI + F
Sbjct: 191 IDHNSKSHYCL--VKNMPNLIEADIDVELHSIKSLIGSITSVKRLSICSQAMYDGGFVFN 248
Query: 130 NLMHMNL-----HLLSWDSVYKMLKNSPKLQVFEVV------SNGGSFVPDPHIVPECLT 178
L H+ L H S D + ++LK+S LQ ++ ++ + P VPEC+
Sbjct: 249 QLKHLKLCRCKGH--SSDLLVRLLKDSSNLQALDLSEMDYHENHDILYWHQPSTVPECML 306
Query: 179 SQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRR 238
+ ++ Y GTP E A Y ++N+ L+T I S + + + ++ ELA R
Sbjct: 307 LSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKS--CVFDDERFDMLKELALSSRA 364
Query: 239 SALCELSF 246
S C+L F
Sbjct: 365 STTCQLVF 372
>AT3G54910.1 | Symbols: | RNI-like superfamily protein |
chr3:20342967-20344277 REVERSE LENGTH=373
Length = 373
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 70 IDYDQQDTFCVEEIKSLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKFPKVEVVPEFP 129
ID++ + +C+ +K++P L+ AD+ + I + ++ +V+ LSI + F
Sbjct: 191 IDHNSKSHYCL--VKNMPNLIEADIDVELHSIKSLIGSITSVKRLSICSQAMYDGGFVFN 248
Query: 130 NLMHMNL-----HLLSWDSVYKMLKNSPKLQVFEVV------SNGGSFVPDPHIVPECLT 178
L H+ L H S D + ++LK+S LQ ++ ++ + P VPEC+
Sbjct: 249 QLKHLKLCRCKGH--SSDLLVRLLKDSSNLQALDLSEMDYHENHDILYWHQPSTVPECML 306
Query: 179 SQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRR 238
+ ++ Y GTP E A Y ++N+ L+T I S + + + ++ ELA R
Sbjct: 307 LSLQTLNLSAYRGTPEERDLAVYFLKNAVHLKTTTIKS--CVFDDERFDMLKELALSSRA 364
Query: 239 SALCELSF 246
S C+L F
Sbjct: 365 STTCQLVF 372
>AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:63465-65365 FORWARD
LENGTH=453
Length = 453
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 112/305 (36%), Gaps = 71/305 (23%)
Query: 10 SCTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPILQDL---K 66
+C TL L+L + HLE V + ++ L GCPIL++L +
Sbjct: 142 TCNTLETLRLVLLILVDISSPVVMKSLRTLHLELVSYKDESSIRNLLSGCPILEELLVIR 201
Query: 67 AHDIDYDQQDTFCVEEIKSLPKL------------------------LTADLHYQWFDIY 102
D D + F ++E+ SL +L L DL F +
Sbjct: 202 GEDSDIE---VFTIDEVPSLKRLTINDDHDGQEFWGYVINAPSLKYLLIEDLRCPGFCLN 258
Query: 103 IPLKAVCNV------------EYLSITK------------FPKVEVVPEFPNLMHMNLHL 138
P N+ YL+ K +P + + +L +
Sbjct: 259 APELMEANIFDGTSITNDNFLGYLTSVKRLLLNLSPWKITYPTGSIFYQLVSLEMYTREI 318
Query: 139 LSWDSVYKMLKNSPKLQVFEVVSN----------GGSFVPDPHIVPECLTSQFRKCSVEY 188
WD + ML++SPKLQV ++ N GG + +P VPECL S
Sbjct: 319 DWWDLLTLMLEHSPKLQVLKLTDNCVKFHKNGLPGGKW-NEPKYVPECLLSHLETFVWRR 377
Query: 189 YN-GTPSELRFAKYIMENSTTLQTMMICSMPILASEL-----KDELFTELASCQRRSALC 242
++ G E A YI++N+ L + P+ + EL + ++ EL R S C
Sbjct: 378 FDWGREEEKEIATYILKNARRLNKATFSTNPVNSEELDKLKERRKVHNELDGVVRASNSC 437
Query: 243 ELSFK 247
+ FK
Sbjct: 438 QFVFK 442
>AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=443
Length = 443
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 30/191 (15%)
Query: 78 FCVEEIKSLPKLLTADL----HYQWFDIYIPLKAVCNVEYLSI-----TKFPKVEVVPEF 128
FC+ I++ P+L+ A++ H +I L+++ +V+ LS+ KFP +V +
Sbjct: 258 FCL--IENAPELVEAEISDVSHIANENI---LESLTSVKRLSLESPIKIKFPTGKVFDQL 312
Query: 129 PNLMHMNLHLLSWDSVYKMLKNSPKLQVFEVVS--------NGGSFVPDPHIVPECL--- 177
L + W+ + +ML++SPKLQ+ ++ +G ++ P P VPECL
Sbjct: 313 VYLDVLTKEREWWNLLSRMLESSPKLQILKLTGLSCIEKGLDGQNWNP-PKCVPECLLFH 371
Query: 178 TSQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASEL--KDELFTELASC 235
+F E+ G E+ A YI+EN+ L+ + I L + E+ ELAS
Sbjct: 372 LEKFLWTGYEWQRGDEKEV--ATYILENARLLKKATFSTKRIDLENLEKRREMLNELASV 429
Query: 236 QRRSALCELSF 246
R S C L F
Sbjct: 430 ARASDSCHLVF 440
>AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13324130-13325559
FORWARD LENGTH=419
Length = 419
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 113/306 (36%), Gaps = 68/306 (22%)
Query: 3 SLNCCIFSCTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPIL 62
SL +++ TL L+L HL+ V + +L L GCP L
Sbjct: 119 SLPSSLYTSDTLETLRLINFVLLDVPSSVCLPSLKVLHLKTVDYEDDASLPSLLFGCPNL 178
Query: 63 QDL--KAHDIDYDQQDTFCVEEIKSLPKLLTADLHYQWFDIYIPLKAVCNVEYLSITK-- 118
++L + HD D + TF V SL +L D +Y D Y+ V +++YL+IT
Sbjct: 179 EELFVERHDQDLEMDVTFVV---PSLRRLSMIDKNYGQCDRYV--IDVPSLKYLNITDDA 233
Query: 119 ---FPKVEVVPE------------------------------------------FPNLMH 133
++E +PE F L+H
Sbjct: 234 VYDVRQIENMPELVEAHVDITQGVTHKFLRALTSVRQLSLCLSLSEVMCPSGIIFSQLVH 293
Query: 134 MNLHLLS---WDSVYKMLKNSPKLQVFEVVSNG------GSFVPD----PHIVPECLTSQ 180
+NL + WD + ML++SPKLQ +++ G P P VPECL
Sbjct: 294 LNLSTVVKGWWDLLTSMLQDSPKLQSLKLIDKQHESGLCGIETPIGWKLPSSVPECLLFS 353
Query: 181 FRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRRSA 240
Y G + A Y+++N+ L+T E K + ELAS S
Sbjct: 354 LEAFEWIGYKGRRGDREVATYVLKNAACLRTAKFSPESTDVGE-KYHMLKELASVPTAST 412
Query: 241 LCELSF 246
+L F
Sbjct: 413 SSKLLF 418
>AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 114/301 (37%), Gaps = 64/301 (21%)
Query: 10 SCTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPILQDLKAHD 69
+C TL LKL HLE V++ ++ L GCP L++L+ +
Sbjct: 146 TCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGLEELRLYR 205
Query: 70 ID-------------------YDQQDT---------------FCVEEIK------SLPKL 89
D +D D +EE++ + P+L
Sbjct: 206 GDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINAPFLKYLLIEELRCPEFCLNAPEL 265
Query: 90 LTADLHY-------QWFDIYIPL-KAVCNVEYLSITKFPKVEVVPEFPNLMHMNLHLLSW 141
+ A++ ++ + + + + N+ L IT +P + + +L W
Sbjct: 266 VEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLKIT-YPTGSMFYQLVSLEMYTREAEWW 324
Query: 142 DSVYKMLKNSPKLQVFEVVSNGGSFVPD---------PHIVPECLTSQFRKCSVEYYN-G 191
+ + ML+NSPKLQV ++ +F D P VPECL SQ ++ G
Sbjct: 325 NLLTLMLENSPKLQVLKLTDRSQNFHKDGLVSGKWNEPKDVPECLLSQLETFVWRRFDWG 384
Query: 192 TPSELRFAKYIMENSTTLQTMMICSMPILASEL-----KDELFTELASCQRRSALCELSF 246
E A YI++N L+ + PI + EL + ++ L R S C+L F
Sbjct: 385 REEEKEIATYILKNGRRLKKATFSTNPIESEELNKLKERRKVLNGLDGVVRASNSCQLVF 444
Query: 247 K 247
K
Sbjct: 445 K 445
>AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 114/301 (37%), Gaps = 64/301 (21%)
Query: 10 SCTTLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPILQDLKAHD 69
+C TL LKL HLE V++ ++ L GCP L++L+ +
Sbjct: 146 TCNTLETLKLVLCILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGLEELRLYR 205
Query: 70 ID-------------------YDQQDT---------------FCVEEIK------SLPKL 89
D +D D +EE++ + P+L
Sbjct: 206 GDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINAPFLKYLLIEELRCPEFCLNAPEL 265
Query: 90 LTADLHY-------QWFDIYIPL-KAVCNVEYLSITKFPKVEVVPEFPNLMHMNLHLLSW 141
+ A++ ++ + + + + N+ L IT +P + + +L W
Sbjct: 266 VEANIAEVTSITIEKFLGSFTSVSRLLLNLSPLKIT-YPTGSMFYQLVSLEMYTREAEWW 324
Query: 142 DSVYKMLKNSPKLQVFEVVSNGGSFVPD---------PHIVPECLTSQFRKCSVEYYN-G 191
+ + ML+NSPKLQV ++ +F D P VPECL SQ ++ G
Sbjct: 325 NLLTLMLENSPKLQVLKLTDRSQNFHKDGLVSGKWNEPKDVPECLLSQLETFVWRRFDWG 384
Query: 192 TPSELRFAKYIMENSTTLQTMMICSMPILASEL-----KDELFTELASCQRRSALCELSF 246
E A YI++N L+ + PI + EL + ++ L R S C+L F
Sbjct: 385 REEEKEIATYILKNGRRLKKATFSTNPIESEELNKLKERRKVLNGLDGVVRASNSCQLVF 444
Query: 247 K 247
K
Sbjct: 445 K 445
>AT5G56452.1 | Symbols: | FBD-like domain family protein |
chr5:22860483-22861336 REVERSE LENGTH=227
Length = 227
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 141 WDSVYKMLKNSPKLQVFEV--------VSNGGSFVPDPHIVPECLTSQFRKCSVEYYNGT 192
W + ML NSPKLQV ++ +S+ S P VPECL +YYNG
Sbjct: 113 WGLLTWMLDNSPKLQVLKLGKCKERCFISSIESHWRGPISVPECLRLHLSTFEWKYYNGR 172
Query: 193 PSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRRSALCEL 244
E + YI++N+ L+T + + + + E+ S R S+ C+L
Sbjct: 173 DEEKKIVAYILKNARQLKTAAFSVQRVFPMKERFQKHKEVVSLHRASSSCKL 224
>AT5G56452.2 | Symbols: | FBD-like domain family protein |
chr5:22860483-22861336 REVERSE LENGTH=226
Length = 226
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 141 WDSVYKMLKNSPKLQVFEV--------VSNGGSFVPDPHIVPECLTSQFRKCSVEYYNGT 192
W + ML NSPKLQV ++ +S+ S P VPECL +YYNG
Sbjct: 112 WGLLTWMLDNSPKLQVLKLGKCKERCFISSIESHWRGPISVPECLRLHLSTFEWKYYNGR 171
Query: 193 PSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRRSALCEL 244
E + YI++N+ L+T + + + + E+ S R S+ C+L
Sbjct: 172 DEEKKIVAYILKNARQLKTAAFSVQRVFPMKERFQKHKEVVSLHRASSSCKL 223
>AT3G52690.1 | Symbols: | RNI-like superfamily protein |
chr3:19530736-19531811 FORWARD LENGTH=299
Length = 299
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 64/269 (23%)
Query: 40 HLEQVKFTRYQNLTELFHGCPILQDLKAHD----------------------IDYDQQDT 77
HL+ V F ++ + L GCP L+DL + IDY +
Sbjct: 31 HLDCVNFKHNESFSNLISGCPNLEDLFMYQYYPLDVVMNFIIVAPSLKRLVIIDYREAGG 90
Query: 78 FCVEE------------------IKSLPKLLTADLHYQWFDIYIP--LKAVCNVEYLSIT 117
+ + I++ P L+ A + F IY L ++ + + LS+
Sbjct: 91 YVINAPTLKYLKIKGLSHCGFCLIENAPVLVEAKIR-NLFYIYKEKILGSLKSAKRLSLD 149
Query: 118 KFP-KVEVVPEFPNLMHMNLHLLS---WDSVYKMLKNSPKLQVFEVVSN----------G 163
P + + F L+H+ ++ W+ + ML +SPKLQV +++ G
Sbjct: 150 LSPLECPIDSIFYQLVHLEIYTCKEEWWNLLKLMLDSSPKLQVLKLIGKNLDFKKVGMVG 209
Query: 164 GSFVPDPHIVPECLTSQFRK-CSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILAS 222
G + +P VPECL SQ + Y+ + E A YI++N+ L+ + + PI +
Sbjct: 210 GKW-NEPKNVPECLLSQLKMFVWTSYHWESEVEKEVATYILKNARQLKNVSFSTRPIHSK 268
Query: 223 EL-----KDELFTELASCQRRSALCELSF 246
E K ++ EL R S+ C L F
Sbjct: 269 EHNKLEEKCKMLKELDGVVRASSSCHLVF 297
>AT5G56800.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr5:22972989-22974208 FORWARD LENGTH=344
Length = 344
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 107/270 (39%), Gaps = 70/270 (25%)
Query: 40 HLEQVKFTRYQNLTELFHGCPILQDLKAHDIDYDQQDTFCVEEIKSLPKLLTADLHYQW- 98
HL V+F+ +++ L CP L+DL Y F + ++P L + + Y W
Sbjct: 83 HLLSVRFSDDKSVQRLLSVCPKLEDLVVKRTTYVNVRIFSI----NVPSLRSLSIDYSWA 138
Query: 99 ---------FDIYIPLKAVCNVE-----YLSITKFPK-----VEV--------VPEFPNL 131
F I P N++ L PK VEV + ++
Sbjct: 139 VSRPADVHGFVIDAPSLRFMNIKDHFSNLLQFENMPKLVKANVEVDCDLSEKFIGSITSI 198
Query: 132 MHMNL-------------------HLL-------SWDSVYKMLKNSPKLQVFEVVSNG-- 163
H++L HL W+ + ++L+++P+LQV ++
Sbjct: 199 QHISLCSKNSKIPYPSGTSFFYLEHLELCTCSQDWWNLLNRILEDAPRLQVLKLKLGNCV 258
Query: 164 ------GSFVPDPHIVPECLTSQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSM 217
+ +P VP+CL+S +Y GT E + AKYI+ ++ L+ + S+
Sbjct: 259 QCSTELMDYWNEPCSVPKCLSSHLEIFEWRHYKGTKQERKVAKYILAKASCLKVAIFSSV 318
Query: 218 PILASELKDELFTELASCQRRSALCELSFK 247
I K+ +F +L + R S CEL F+
Sbjct: 319 CI----EKNLIFKKLENVDRGSKACELVFQ 344
>AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18177676-18179339 FORWARD LENGTH=415
Length = 415
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 51/253 (20%)
Query: 40 HLEQVKFTRYQNLTELFHGCPILQDLKAHDIDYDQQDTFCVEEIKSLPKLLTADLHYQWF 99
HL +V F ++ L GCP L+DL H + +TF + + SL +L D + +
Sbjct: 167 HLYKVHFYGKDSVYNLLCGCPSLRDLIVHRYR-ECMETFTI-AVPSLERLTIEDSGFGYG 224
Query: 100 DIYIPLKAVCNVEYLSITKFPK-----VEVVPEFP-------------NLM-------HM 134
Y+ +++YL+I +F +E PE N++ +
Sbjct: 225 CCYVI--NAPSLKYLNIRRFKYLNSCLIEKAPELAEAKVSDVSDIENENILESLTSAKRL 282
Query: 135 NLHLLS---WDSVYKMLKNSPKLQVFEVV-----SNGGSFVP----DPHIVPECL---TS 179
++HL W+ + ML+ SPKLQ+ ++ S G+ + P VPECL
Sbjct: 283 SIHLSPLEWWNLLTFMLEASPKLQILKLTDLNMSSTKGNQIGQKWIQPKCVPECLLFHLE 342
Query: 180 QFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELK-----DELFTELAS 234
F E+ E+ A+YI+ N+T+L+ + PI +LK E+ ELAS
Sbjct: 343 TFVWTGYEWQRRDEKEV--ARYILRNTTSLKKATFSTKPIEPVKLKVFKKRREILNELAS 400
Query: 235 CQRRSALCELSFK 247
R S + F+
Sbjct: 401 LGRASNPSDFVFE 413
>AT3G50710.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:18845199-18846673
REVERSE LENGTH=427
Length = 427
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 127 EFPNLMHMNL---HLLSWDSVYKMLKNSPKLQVFEVVS---NGGSFVPDP--------HI 172
EF L+H+ L L+ WD + ML++SPKLQV ++ ++ DP
Sbjct: 292 EFYQLVHLELCGDALMWWDLLTWMLQSSPKLQVLKIYECKCEEHDYLDDPIEEHWEEPSS 351
Query: 173 VPECLTSQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPIL-ASELKDELFTE 231
VP+CL +YYN E + YI++N+ L+T + L E + E
Sbjct: 352 VPQCLLFHLNIFEWKYYNAGDEEKKVVAYILKNARQLKTATFSAASYLYPKEERSRELNE 411
Query: 232 LASCQRRSALCEL 244
L R S+ C+L
Sbjct: 412 LVYMARASSSCQL 424
>AT3G26920.2 | Symbols: | FBD / Leucine Rich Repeat domains
containing protein | chr3:9921241-9922429 FORWARD
LENGTH=301
Length = 301
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 25/229 (10%)
Query: 40 HLEQVKFTRYQNLTELFHGCPILQDLKAHDIDYDQQDTFCVEEIKSLPKLLTADLHYQWF 99
+L +V+F +++ L GC L++L H TF + + SL +L +Y+ F
Sbjct: 75 NLHEVEFVNDESVVNLLAGCISLENLVIHQTTDLNVKTFTI-AVPSLQRLTVIVEYYEEF 133
Query: 100 DIYI----PLKAV-CNVEYLSITKFPKVEV--VPEFPN-LMHMNLHLLS------WDSVY 145
+++ LK + V+ LS+ K VE+ +P N H+ LS W+ +
Sbjct: 134 SVFVVNTPSLKYLKIEVQRLSL-KVSLVEIFSLPPISNTFYHLTYLELSTYKPKWWNLLT 192
Query: 146 KMLKNSPKLQVFEVVSNGGS-------FVPDPHIVPECLTSQFRKCSVEYYNGT-PSELR 197
ML SP LQV ++ S +P VPECL Y G +E+
Sbjct: 193 LMLDTSPNLQVLKIFDFMTSQEQRPWEKWNEPKNVPECLLLHLETFVWTCYEGKLENEIE 252
Query: 198 FAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRRSALCELSF 246
AKYI+ N+ L+ + I + + E+ EL S R S C+L F
Sbjct: 253 LAKYILRNARRLKKATFSIIEI-NPDKRVEMVGELKSVVRASNSCQLVF 300
>AT5G56400.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr5:22846069-22847615 REVERSE LENGTH=455
Length = 455
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 114/295 (38%), Gaps = 61/295 (20%)
Query: 13 TLVVLKLKGIXXXXXXXXXXXXXXXXXHLEQVKFTRYQNLTELFHGCPILQDL--KAHDI 70
TLV LKLK HL VK++ +++ L CP L++L K H+
Sbjct: 160 TLVSLKLKNAILGAIWLPTCFISLKTLHLRYVKYSGDESVRTLISSCPSLRNLVVKRHNE 219
Query: 71 DYDQQDTFCVEEIKSLPKLL---------------TADLHY-QWFDIYIPLKAVCNVEYL 114
D ++ V ++SL L T +L Y D Y L + ++ YL
Sbjct: 220 DNVKRFAIIVRYLQSLTVYLSPLHGVADSDAYVINTPNLKYLNIKDHYTDLCSFEDMPYL 279
Query: 115 -----------------SITKFPKVEV--------VPE---FPNLMHMNL---HLLSWDS 143
S+T K+ + PE F L H+ L W +
Sbjct: 280 DEANLDVAFTHTENFFESLTSVKKLSLCLKKSNAQYPEGIIFSQLDHLELCTCDDSKWLN 339
Query: 144 VYKML-KNSPKLQVFEVVSNGGSFVP---------DPHIVPECLTSQFRKCSVEYYNGTP 193
+ ML +SPKL+V ++ FV P VPECLT Y T
Sbjct: 340 ILAMLLPDSPKLRVLKLNDKNHDFVDKYCSCTWNQQPSYVPECLTKSLEIFEWRNYKATF 399
Query: 194 SELRFAKYIMENSTTLQTMMICSMPILASELKDE--LFTELASCQRRSALCELSF 246
E A YI++NST L+ +I ++ E+ D + +LAS S+ CEL F
Sbjct: 400 RERDVAVYILKNSTCLKKTVISPKLKISGEICDHHIIREDLASLFMGSSSCELKF 454
>AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15449279-15450601 REVERSE LENGTH=379
Length = 379
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 50/251 (19%)
Query: 46 FTRYQNLTELFHGCPILQDLKAHDI--DYDQQDTFCVEEIKSLPKLLTADLHYQWFDI-- 101
F + L +L GCP+L+DL D ++ T + ++SL L + + + I
Sbjct: 125 FIDGKYLQQLISGCPVLEDLSLRFCCNDNLREFTVIIPSLQSLSLFLFGNSNLNRYKIDT 184
Query: 102 ----YIPLKAVCNVEYLSITKFPK-----VEVVPE------------------------- 127
Y+ L+ + E+ S T PK V+V
Sbjct: 185 PSLKYLKLEDWNDPEHYSWTNMPKLREAYVDVESSNHLKTLIGSITSVKHLTICCLEDYL 244
Query: 128 ------FPNLMHMNLHLLSWDS---VYKMLKNSPKLQV---FEVVSNGGSFVPDPHIVPE 175
F +L H+ L + +DS + ++LK SP LQV FE+ N P V E
Sbjct: 245 YGDGFIFNHLEHLKLCMCPFDSSNLLGQLLKGSPNLQVLDIFEMKRNDIVCWNQPSSVLE 304
Query: 176 CLTSQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASC 235
CL S + + Y G P + A YI++N+ L+T + + + ++ EL
Sbjct: 305 CLLSSLKILNWSAYFGRPQDRDIAVYILKNACHLKTATFLTDKRINDVRRLKMIKELRLS 364
Query: 236 QRRSALCELSF 246
R S+ C+L F
Sbjct: 365 PRASSTCQLVF 375
>AT5G56570.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr5:22902736-22904404 FORWARD LENGTH=439
Length = 439
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 127 EFPNLMHMNLHLLS--WDSVYK-MLKNSPKLQVFEVVSNGGSFV------PDPHIVPECL 177
+F NL+H+ L S W ++ ML ++P L+ + S V P +VPECL
Sbjct: 313 KFSNLVHLKLCTCSAGWQNLLACMLNDAPNLRSLTLKLRQKSDVNPKKVWEKPTVVPECL 372
Query: 178 TSQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQR 237
+++ Y GT E YI+ N+T LQ + D F+EL S +R
Sbjct: 373 STRLEILKWRDYEGTEHEKDMVGYILANATFLQRATFSTK---DRNQCDSRFSELQSMER 429
Query: 238 RSALCELSF 246
S +CE F
Sbjct: 430 VSEICEFVF 438
>AT1G51055.1 | Symbols: | FBD-like domain family protein |
chr1:18925286-18926315 REVERSE LENGTH=161
Length = 161
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 131 LMHMNLHLLS---WDSVYKMLKNSPKLQVFEV-------VSNGGSFVP--DPHIVPECLT 178
L H+ L L S W+ + +L ++PKL+V ++ V S P P VP CL+
Sbjct: 37 LDHLELCLCSTEWWNLLTCILDDAPKLRVLKLKLYRKHCVEYNESMEPWKQPDYVPICLS 96
Query: 179 SQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASCQRR 238
S YNG E AKYI+EN++ L+ + L S K + EL R
Sbjct: 97 SYLEIFEWRQYNGEEQEREVAKYILENASRLKKAIF----YLESAEKHGILKELECMARG 152
Query: 239 SALCELSF 246
S C+L F
Sbjct: 153 SKKCQLVF 160
>AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), F-box domain, Skp2-like
(InterPro:IPR022364), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: FBD, F-box and
Leucine Rich Repeat domains containing protein
(TAIR:AT1G55660.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr4:8599035-8601761 FORWARD LENGTH=539
Length = 539
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 86 LPKLLTADLHYQWFDIYIPLKAVCNVEYLSITKFPKVE--VVPEFPNLMHM-NLHLLSWD 142
+P L AD+ + DIY +++V +V+ LS+ E + P+ + NL L D
Sbjct: 1 MPNLEEADISSTYPDIYKFVRSVTSVKRLSLCIRVNAEEALYPDGIVFNQLENLKLCPCD 60
Query: 143 SVY-----KMLKNSPKLQVFEVVSNGGSF--VPDPHI--------VPECLTSQFRKCSVE 187
S + ++LK SP L+ EV N G DP + VPECL S +
Sbjct: 61 SNWSKLFVRLLKYSPNLRELEVSLNEGHTKCCVDPQVSLENQLNFVPECLLSSLQTFKWT 120
Query: 188 YYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTEL 232
+G+ + AKYI+ N+ L+T I P L +E ++ + EL
Sbjct: 121 GIHGSLKVMDLAKYILRNARCLKTATILFQPALETE-RETMIQEL 164
>AT5G38580.1 | Symbols: | FBD-like domain family protein |
chr5:15451164-15451842 REVERSE LENGTH=168
Length = 168
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 128 FPNLMHMNLHLLSWDS---VYKMLKNSPKLQVFEVV---------SNGGSFVPDPHIVPE 175
F L H+NL + +S + ++LK+SP L++ ++ NG P+ VPE
Sbjct: 33 FNQLKHLNLCVCKEESSNLLGQLLKDSPNLRILDISVVKDHGTDERNGMVSWNQPNFVPE 92
Query: 176 CLTSQFRKCSVEYYNGTPSELRFAKYIMENSTTLQTMMICSMPILASELKDELFTELASC 235
CL S + Y G + A YI++N+ L+T I + ++ ELA
Sbjct: 93 CLLSSLQTLLWSRYFGRQQDRDIAVYILKNACHLKTATILADTDEHDVPNLQMIKELALS 152
Query: 236 QRRSALCELSF 246
R S +C+L F
Sbjct: 153 LRTSVICQLVF 163