Miyakogusa Predicted Gene
- Lj0g3v0314649.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0314649.2 Non Chatacterized Hit- tr|C6TE57|C6TE57_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56979
PE,78.59,0,ClpP/crotonase,NULL; seg,NULL; menB: naphthoate
synthase,Naphthoate synthase; ENOYL-COA HYDRATASE-RE,CUFF.21256.2
(314 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G60550.1 | Symbols: ECHID, DHNS | enoyl-CoA hydratase/isomera... 505 e-143
AT4G16210.1 | Symbols: ECHIA, E-COAH-2 | enoyl-CoA hydratase/iso... 114 9e-26
AT4G16800.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 103 2e-22
AT5G43280.1 | Symbols: ATDCI1, DCI1 | delta(3,5),delta(2,4)-dien... 64 1e-10
AT5G65940.2 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrola... 60 2e-09
AT5G65940.3 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrola... 60 3e-09
AT5G65940.1 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrola... 59 3e-09
AT2G30660.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 58 7e-09
AT4G29010.1 | Symbols: AIM1 | Enoyl-CoA hydratase/isomerase fami... 57 1e-08
AT2G30650.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 57 1e-08
AT5G43280.2 | Symbols: ATDCI1, DCI1 | delta(3,5),delta(2,4)-dien... 57 2e-08
>AT1G60550.1 | Symbols: ECHID, DHNS | enoyl-CoA hydratase/isomerase
D | chr1:22305988-22308092 REVERSE LENGTH=337
Length = 337
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/338 (73%), Positives = 275/338 (81%), Gaps = 25/338 (7%)
Query: 1 MADNNDLLHTAIRRLASVANHXXXXXXXXXXXXXXXXCHTSSSSSTYQR----------- 49
MAD+N+L +A RRL+ V NH C SS + +
Sbjct: 1 MADSNEL-GSASRRLSVVTNHLIPIGFSPARADSVELCSASSMDDRFHKVHGEVPTHEVV 59
Query: 50 -------------DFTDILYEKAVGEGIAKITINRPERRNAFRPHTVKELIRAFNDARDD 96
+F DI+YEKA+ EGIAKITINRPERRNAFRP TVKEL+RAFNDARDD
Sbjct: 60 WKKTDFFGEGDNKEFVDIIYEKALDEGIAKITINRPERRNAFRPQTVKELMRAFNDARDD 119
Query: 97 ASVGVIILTGKGTQAFCSGGDQALRTEDGYSDYENIGRLNVLDLQVQIRRLPKPVIAMVA 156
+SVGVIILTGKGT+AFCSGGDQALRT+DGY+D ++GRLNVLDLQVQIRRLPKPVIAMVA
Sbjct: 120 SSVGVIILTGKGTKAFCSGGDQALRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMVA 179
Query: 157 GYAVGGGHILHMVCDLTIAAHNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLT 216
GYAVGGGHILHMVCDLTIAA NAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWF+T
Sbjct: 180 GYAVGGGHILHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFMT 239
Query: 217 RFYTAVEADKMGLVNTVVPLENLEKETIKWCREILRNSPTAIRVLKSALNAVDDGHAGLQ 276
RFYTA EA+KMGL+NTVVPLE+LEKET+KWCREILRNSPTAIRVLK+ALNAVDDGHAGLQ
Sbjct: 240 RFYTASEAEKMGLINTVVPLEDLEKETVKWCREILRNSPTAIRVLKAALNAVDDGHAGLQ 299
Query: 277 EIGGNATLIFYGTEEANEGKTAYMQRRPPDFSKFPRRP 314
+GG+ATL+FYGTEEA EG+TAYM RRPPDFSKF RRP
Sbjct: 300 GLGGDATLLFYGTEEATEGRTAYMHRRPPDFSKFHRRP 337
>AT4G16210.1 | Symbols: ECHIA, E-COAH-2 | enoyl-CoA
hydratase/isomerase A | chr4:9176864-9177978 REVERSE
LENGTH=265
Length = 265
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 118/222 (53%), Gaps = 24/222 (10%)
Query: 63 GIAKITINRPERRNAFRPHTVKELIRAFNDARDDASVGVIILTGKGTQAFCSGGDQALRT 122
GIA ITINRP+ N+ + +L +AF D D SV V+I TG G ++FCSG D
Sbjct: 18 GIAVITINRPKSLNSLTRAMMVDLAKAFKDMDSDESVQVVIFTGSG-RSFCSGVD----- 71
Query: 123 EDGYSDYENIGRLNVLDLQ----VQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAAHN 178
+ E++ + +V D + VQ+ RL KP+I + G+A+ G L + CD+ +A+
Sbjct: 72 ---LTAAESVFKGDVKDPETDPVVQMERLRKPIIGAINGFAITAGFELALACDILVASRG 128
Query: 179 AIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRFYTAVEADKMGLVNTVVPLEN 238
A F T + G F + S +SR++G KARE+ + TA A K+G VN VV
Sbjct: 129 AKFMDTHARFGIFPSWGLSQKLSRIIGANKAREVSLTSMPLTADVAGKLGFVNHVVE--- 185
Query: 239 LEKETIKWCRE----ILRNSPTAIRVLKSALN---AVDDGHA 273
E E +K RE I++N + +KS +N +D GHA
Sbjct: 186 -EGEALKKAREIAEAIIKNEQGMVLRIKSVINDGLKLDLGHA 226
>AT4G16800.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein | chr4:9454931-9457000
REVERSE LENGTH=301
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 4/248 (1%)
Query: 63 GIAKITINRPERRNAFRPHTVKELIRAFNDARDDASVGVIILTGKGTQAFCSGGDQALRT 122
GI ++ ++RP +NA +K L AF D S V+++ FC+G D L+
Sbjct: 54 GIIEVNLDRPVTKNAINKEMLKSLQNAFESIHQDNSARVVMIRSLVPGVFCAGAD--LKE 111
Query: 123 EDGYSDYENIGRLNVLDLQVQ-IRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAAHNAIF 181
S E +N L I L P IA + G A+GGG + + CDL I NA+F
Sbjct: 112 RRTMSPSEVHTYVNSLRYMFSFIEALSIPTIAAIEGAALGGGLEMALACDLRICGENAVF 171
Query: 182 GQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRFYTAVEADKMGLVNTVVPLENLEK 241
G + G+ +SRLVG ++E+ F R A+EA GLVN V +
Sbjct: 172 GLPETGLAIIPGAGGTQRLSRLVGRSVSKELIFTGRKIDAIEAANKGLVNICVTAGEAHE 231
Query: 242 ETIKWCREILRNSPTAIRVLKSALN-AVDDGHAGLQEIGGNATLIFYGTEEANEGKTAYM 300
+ I+ ++I P AI++ K A++ ++ A E+ T++ EG A+
Sbjct: 232 KAIEMAQQINEKGPLAIKMAKKAIDEGIETNMASGLEVEEMCYQKLLNTQDRLEGLAAFA 291
Query: 301 QRRPPDFS 308
++R P ++
Sbjct: 292 EKRKPLYT 299
>AT5G43280.1 | Symbols: ATDCI1, DCI1 |
delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 |
chr5:17367947-17369113 FORWARD LENGTH=278
Length = 278
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 22/273 (8%)
Query: 55 LYEKAVGEGIAKITINRPERRNAFRPHTVKELIRAFNDARDDASVGVIILTGKGTQAFCS 114
+ K + + INRP NA E +A + + V VIIL+G G FCS
Sbjct: 11 IIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSGAGKH-FCS 69
Query: 115 GGD----------QALRTEDGYSDYENIGRLNVLDLQVQ-IRRLPKPVIAMVAGYAVGGG 163
G D + + G S + ++ + + I + KPVIA + G +GGG
Sbjct: 70 GIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIHGACIGGG 129
Query: 164 HILHMVCDLTIAAHNAIFGQTGPKVGSF-DAGYGSSIMSRLVGPKKAREMWFLTRFYTAV 222
L CD+ + +A F + D G + S +VG A E+ R ++
Sbjct: 130 VDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRLPS-IVGYANAMELALTARRFSGS 188
Query: 223 EADKMGLVNTVVPLEN-LEKETIKWCREILRNSPTAIRVLKSAL--NAVDDGHAGLQEIG 279
EA +GLV+ V ++ L+ I SP A+ K+ L + GL +
Sbjct: 189 EAKDLGLVSKVFGSKSELDNGVTTIAEGIGGKSPLAVTGTKAVLLRSREVSVEQGLDYVA 248
Query: 280 --GNATLIFYGTEEANEGKTAYMQRRPPDFSKF 310
+A LI +++ NE +A M +R P F+K
Sbjct: 249 TWNSAMLI---SDDLNEAVSAQMMKRKPRFAKL 278
>AT5G65940.2 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrolase
1 | chr5:26377132-26379161 REVERSE LENGTH=328
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 67 ITINRPERRNAFRPHTVKELIRAFNDARDDASVGVIILTGKGTQAFCSGGDQALRTED-- 124
+T+NRP++ NA H + L++ F +D SV ++IL G G +AFC+GGD A D
Sbjct: 22 LTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHG-RAFCAGGDVAAVVRDIN 80
Query: 125 ------GYSDYENIGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAAHN 178
G + + + LN + + K ++++ G +GGG + + IA N
Sbjct: 81 QGNWRLGANYFSSEYMLNYV-----MATYSKAQVSILNGIVMGGGAGVSVHGRFRIATEN 135
Query: 179 AIFGQTGPKVGSFDAGYGSSIMSRL-------VGPKKAREMWFLTRFYTAVEADKMGLVN 231
+F +G F S +SRL VG AR E GL
Sbjct: 136 TVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGAR--------LDGAEMLACGLAT 187
Query: 232 TVVPLENLEKETIKWCREILRNSPT 256
VP L CR I N PT
Sbjct: 188 HFVPSTRLTALEADLCR-INSNDPT 211
>AT5G65940.3 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrolase
1 | chr5:26376927-26379161 REVERSE LENGTH=342
Length = 342
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 67 ITINRPERRNAFRPHTVKELIRAFNDARDDASVGVIILTGKGTQAFCSGGDQALRTED-- 124
+T+NRP++ NA H + L++ F +D SV ++IL G G +AFC+GGD A D
Sbjct: 22 LTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHG-RAFCAGGDVAAVVRDIN 80
Query: 125 ------GYSDYENIGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAAHN 178
G + + + LN + + K ++++ G +GGG + + IA N
Sbjct: 81 QGNWRLGANYFSSEYMLNYV-----MATYSKAQVSILNGIVMGGGAGVSVHGRFRIATEN 135
Query: 179 AIFGQTGPKVGSFDAGYGSSIMSRL-------VGPKKAREMWFLTRFYTAVEADKMGLVN 231
+F +G F S +SRL VG AR E GL
Sbjct: 136 TVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGAR--------LDGAEMLACGLAT 187
Query: 232 TVVPLENLEKETIKWCREILRNSPT 256
VP L CR I N PT
Sbjct: 188 HFVPSTRLTALEADLCR-INSNDPT 211
>AT5G65940.1 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrolase
1 | chr5:26376830-26379161 REVERSE LENGTH=378
Length = 378
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 67 ITINRPERRNAFRPHTVKELIRAFNDARDDASVGVIILTGKGTQAFCSGGDQALRTED-- 124
+T+NRP++ NA H + L++ F +D SV ++IL G G +AFC+GGD A D
Sbjct: 22 LTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHG-RAFCAGGDVAAVVRDIN 80
Query: 125 ------GYSDYENIGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAAHN 178
G + + + LN + + K ++++ G +GGG + + IA N
Sbjct: 81 QGNWRLGANYFSSEYMLNYV-----MATYSKAQVSILNGIVMGGGAGVSVHGRFRIATEN 135
Query: 179 AIFGQTGPKVGSFDAGYGSSIMSRL-------VGPKKAREMWFLTRFYTAVEADKMGLVN 231
+F +G F S +SRL VG AR E GL
Sbjct: 136 TVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGAR--------LDGAEMLACGLAT 187
Query: 232 TVVPLENLEKETIKWCREILRNSPT 256
VP L CR I N PT
Sbjct: 188 HFVPSTRLTALEADLCR-INSNDPT 211
>AT2G30660.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein |
chr2:13058500-13061665 REVERSE LENGTH=378
Length = 378
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 67 ITINRPERRNAFRPHTVKELIRAFNDARDDASVGVIILTGKGTQAFCSGGDQALRTEDGY 126
+T+NRP++ NA + + L++ F +D SV ++IL G+G +AFC+GGD ++
Sbjct: 18 LTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQG-RAFCAGGDVPPVVQNMV 76
Query: 127 SDYENIGRLNVLD---LQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAAHNAIFGQ 183
+G D L + KP ++++ G +G G + + IA N +F
Sbjct: 77 QGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGRFRIATENTVFAM 136
Query: 184 TGPKVGSFDAGYGSSIMSRLVG 205
+G F S +SRL G
Sbjct: 137 PETSLGLFPDVGASYFLSRLPG 158
>AT4G29010.1 | Symbols: AIM1 | Enoyl-CoA hydratase/isomerase family
| chr4:14297312-14302016 REVERSE LENGTH=721
Length = 721
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 88/193 (45%), Gaps = 9/193 (4%)
Query: 62 EGIAKITINRPERRNAFRPHTVKELIRAFNDARDDASVGVIILTGKGTQAFCSGGD---- 117
+G+A ITI+ P N+ + L F DA V I+L G + F G D
Sbjct: 14 DGVAVITISNPPV-NSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGR-FSGGFDINVF 71
Query: 118 QALRTEDGYSDYENIGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAAH 177
Q + S + V +L R KPV+A V G A+GGG L M C +AA
Sbjct: 72 QQVHKTGDLSLMPEVSVELVCNLMEDSR---KPVVAAVEGLALGGGLELAMACHARVAAP 128
Query: 178 NAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRFYTAVEADKMGLVNTVVPLE 237
A G +G G+ + RLVG KA +M L++ ++ E K+GL++ +VP
Sbjct: 129 KAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVPPG 188
Query: 238 NLEKETIKWCREI 250
++ + KW +I
Sbjct: 189 DVLSTSRKWALDI 201
>AT2G30650.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein |
chr2:13053777-13056315 REVERSE LENGTH=378
Length = 378
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 67 ITINRPERRNAFRPHTVKELIRAFNDARDDASVGVIILTGKGTQAFCSGGDQALRTEDGY 126
+T NRP++ NA H V L++ F +D SV +++L G+G +AF +GGD D
Sbjct: 18 LTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQG-RAFSAGGDIPPIVRDIL 76
Query: 127 -------SDYENIGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAAHNA 179
+ Y +G L + KP ++++ G +GGG L IA N
Sbjct: 77 QGKLIRGAHYFKVG----YTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENT 132
Query: 180 IFGQTGPKVGSFDAGYGSSIMSRLVG 205
+F +G F S +SRL G
Sbjct: 133 VFAMPETALGLFPDVGASYFLSRLPG 158
>AT5G43280.2 | Symbols: ATDCI1, DCI1 |
delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 |
chr5:17367947-17368750 FORWARD LENGTH=220
Length = 220
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 80/191 (41%), Gaps = 14/191 (7%)
Query: 55 LYEKAVGEGIAKITINRPERRNAFRPHTVKELIRAFNDARDDASVGVIILTGKGTQAFCS 114
+ K + + INRP NA E +A + + V VIIL+G G FCS
Sbjct: 11 IIRKNTDSSVFHLIINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSGAGKH-FCS 69
Query: 115 GGD----------QALRTEDGYSDYENIGRLNVLDLQVQ-IRRLPKPVIAMVAGYAVGGG 163
G D + + G S + ++ + + I + KPVIA + G +GGG
Sbjct: 70 GIDLNSLSSISTQSSSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIHGACIGGG 129
Query: 164 HILHMVCDLTIAAHNAIFGQTGPKVGSF-DAGYGSSIMSRLVGPKKAREMWFLTRFYTAV 222
L CD+ + +A F + D G + S +VG A E+ R ++
Sbjct: 130 VDLITACDIRYCSEDAFFSIKEVDLAIVADLGTLQRLPS-IVGYANAMELALTARRFSGS 188
Query: 223 EADKMGLVNTV 233
EA +GLV+ V
Sbjct: 189 EAKDLGLVSKV 199