Miyakogusa Predicted Gene
- Lj0g3v0314629.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0314629.1 CUFF.21248.1
(695 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 669 0.0
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 7e-85
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 1e-83
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 307 2e-83
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 4e-83
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 306 4e-83
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 1e-81
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 299 4e-81
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 6e-81
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 294 1e-79
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 292 5e-79
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 291 1e-78
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 290 2e-78
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 9e-78
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 5e-76
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 281 1e-75
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 9e-75
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 9e-75
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 276 3e-74
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 276 4e-74
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 1e-73
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 272 5e-73
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 7e-73
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 8e-72
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 8e-71
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 1e-69
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 261 1e-69
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 256 4e-68
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 8e-68
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 9e-68
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 2e-67
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 4e-67
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 5e-67
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 247 2e-65
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 6e-65
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 7e-65
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 8e-65
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 9e-65
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 244 1e-64
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 243 3e-64
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 242 7e-64
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 241 1e-63
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 239 7e-63
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 1e-62
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 237 2e-62
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 235 7e-62
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 5e-61
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 7e-60
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 7e-60
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 2e-59
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 3e-59
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 6e-58
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 7e-58
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 220 3e-57
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 217 2e-56
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 216 3e-56
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 6e-56
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 3e-55
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 212 7e-55
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 9e-55
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 9e-55
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 1e-53
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 207 3e-53
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 5e-53
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 5e-53
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 1e-52
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 3e-52
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 4e-52
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 9e-52
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 2e-51
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 201 2e-51
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 199 6e-51
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 7e-51
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 8e-51
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 8e-51
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 1e-50
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 197 3e-50
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 196 4e-50
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 5e-50
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 2e-49
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 192 5e-49
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 5e-49
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 192 7e-49
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 9e-49
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 6e-48
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 6e-48
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 1e-47
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 8e-47
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 4e-46
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 9e-46
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 1e-45
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 3e-45
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 1e-44
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 1e-44
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 3e-44
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 3e-44
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 176 4e-44
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 172 6e-43
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 170 3e-42
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 7e-41
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 1e-40
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 9e-40
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 162 1e-39
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 2e-39
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 142 9e-34
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 6e-33
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 7e-33
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 6e-30
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 7e-27
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 103 6e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 98 2e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-19
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 94 2e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 92 9e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 92 1e-18
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 4e-18
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 89 1e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 2e-16
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 83 6e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 7e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 7e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 7e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 8e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 3e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 8e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 79 1e-14
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 77 3e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 6e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 76 1e-13
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 74 3e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 73 8e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 72 2e-12
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 6e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 69 1e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 66 1e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 59 2e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 55 2e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 54 5e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 6e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 51 3e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 50 6e-06
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/628 (52%), Positives = 444/628 (70%), Gaps = 6/628 (0%)
Query: 72 NPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISA----WCFPPEQALH 127
NPSD VYT NR ID IKS +L SA F M +RD VTYNLLIS C +A+
Sbjct: 41 NPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGC--SLRAIE 98
Query: 128 LYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL 187
LY EM G+RE+++TF SVL+VC+ F REG+QVHCRV+ GF N+FV LVG Y
Sbjct: 99 LYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA 158
Query: 188 NVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCY 247
+ L +VA +LFDE+ +RNLAV N+LLR FC+ G + Y RM +GV NG+T+CY
Sbjct: 159 CLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCY 218
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
+++ CS+ R + EGK+L S ++K G+ SNIFVAN LVD+YSACG L G+ +SF A+P +
Sbjct: 219 MIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEK 278
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
+VISWNS+VSV AD + D+L+LF+ MQ WG+ PS+R + LN CSR +I GKQIH
Sbjct: 279 DVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIH 338
Query: 368 CHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGAT 427
C+ LK+GFD S+H QSALIDMYGKC+ IE+S +++SL LECCNSLMTSL HCG T
Sbjct: 339 CYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGIT 398
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVAC 487
+D++E+FGLMIDEG DEVT ST LKALS+S + S L+HC A+KSG D AV+C
Sbjct: 399 KDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSC 458
Query: 488 SLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKP 547
SL+DAY++ G E+S ++F+ L +PN C TS+INGYARNGMG + +L M L P
Sbjct: 459 SLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIP 518
Query: 548 DEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXX 607
DE+T L L+GC+H+G+V+EG ++FDS++S +G+ P ++ ++CMVDLL RAG
Sbjct: 519 DEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERL 578
Query: 608 XXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNF 667
Q DC WSSLL+SCR H+NE +G RAA+VL+ L+P++ AV++Q S FY EIG+F
Sbjct: 579 LLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDF 638
Query: 668 DASREIREVALARKMTREIGHSSIEIRQ 695
+ SR+IRE+A +R++ REIG+SS+ ++
Sbjct: 639 EISRQIREIAASRELMREIGYSSVVVKN 666
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 190/615 (30%), Positives = 315/615 (51%), Gaps = 9/615 (1%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLR-DTVTYNLLISAWCFPP--EQALHLYGEMGLLGI-RE 139
I+ + +D SA VF +R D +N L+S + L ++ + I
Sbjct: 46 INVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVP 105
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
S TF +V+ G G +H VVK G++ +V V +LVG Y L E + ++F
Sbjct: 106 DSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVF 165
Query: 200 DELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLN 259
DE+PER++A WN ++ F + G E++L + RM G EPN V+ + CS L
Sbjct: 166 DEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLE 225
Query: 260 EGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVN 319
GK++ +K GF E + +V +ALVD Y C CL A++ F+ +P +++++WNS++
Sbjct: 226 RGKEIHRKCVKKGF-ELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGY 284
Query: 320 ADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGS 379
+E+ M + G PS +L +L +CSR+ + GK IH + ++
Sbjct: 285 VAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR-SVVNAD 343
Query: 380 VHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMID 439
++ +LID+Y KC + + VF K E N +++S G VE++ M+
Sbjct: 344 IYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS 403
Query: 440 EGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHV 499
G+ PD VTF++ L A S A + +H +S +E D + +L+D YS+CG+
Sbjct: 404 VGVKPDVVTFTSVLPA--CSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNE 461
Query: 500 ELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGC 559
+ + +IF ++ + + +T MI+ Y +G ++ L M + GLKPD +T L L+ C
Sbjct: 462 KEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSAC 521
Query: 560 NHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRD-CF 618
H G++ EG F M+S +G++P H+SCM+D+L RAG QTP+ D
Sbjct: 522 GHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAE 581
Query: 619 MWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVAL 678
+ S+L +C H +G R A++LVE PDD + ++ N YA ++DA+R +R
Sbjct: 582 LLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMK 641
Query: 679 ARKMTREIGHSSIEI 693
+ ++ G S IE+
Sbjct: 642 EMGLRKKPGCSWIEM 656
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/623 (29%), Positives = 308/623 (49%), Gaps = 6/623 (0%)
Query: 74 SDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLIS--AWCFPPEQALHLYGE 131
S Y N + + +L SA +F M RD VTYN LI+ + C E+A+ L+
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 132 MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
M L G+ S T +S++ C+ G G Q+H K GF SN + G L+ Y
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 192 REVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKV 251
E A + F E N+ +WNV+L + L + S + +M + + PN T+ +LK
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 252 CSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS 311
C L G+++ S I+K F + N +V + L+D Y+ G L A ++V+S
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNF-QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 558
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
W ++++ + AL F M G L +++C+ + + G+QIH A
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVV 431
GF + Q+AL+ +Y +C IE S FE N+L++ G ++ +
Sbjct: 619 VSGFS-SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 432 ELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMD 491
+F M EG+ + TF + +KA S +A + +H K+G + + V +L+
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKA--ASETANMKQGKQVHAVITKTGYDSETEVCNALIS 735
Query: 492 AYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEIT 551
Y++CG + + + F +S+ N + + ++IN Y+++G G + L M+ ++P+ +T
Sbjct: 736 MYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
Query: 552 FLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQT 611
+ L+ C+H G+V +G F+SM S +G+ P H+ C+VD+L RAG +
Sbjct: 796 LVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 855
Query: 612 PDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASR 671
P K D +W +LL +C HKN E+G AA L+EL+P+D A ++ SN YA +DA
Sbjct: 856 PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARD 915
Query: 672 EIREVALARKMTREIGHSSIEIR 694
R+ + + +E G S IE++
Sbjct: 916 LTRQKMKEKGVKKEPGQSWIEVK 938
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/543 (26%), Positives = 257/543 (47%), Gaps = 24/543 (4%)
Query: 41 RSGTKLWPLMQQRHQSLSFSFIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVF 100
R G+ + +++Q H + + +R T NP +Y++N +D A VF
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVC--NPLIDLYSRNGFVDL---------ARRVF 245
Query: 101 HTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHR 158
+ L+D ++ +IS +A+ L+ +M +LGI T FSSVL+ C +
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 159 EGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFC 218
G Q+H V+K GF S+ +V LV Y ++G A +F + +R+ +N L+ G
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 219 ELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNI 278
+ G E+++ + RM DG+EP+ T L+ CS L G++L + K+GF +N
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 279 FVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLW 338
+ AL++ Y+ C + A F VENV+ WN ++ D L ++ +F MQ+
Sbjct: 426 -IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 484
Query: 339 GQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIES 398
P+ + +L +C R ++ LG+QIH +K F + + + S LIDMY K +++
Sbjct: 485 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF-QLNAYVCSVLIDMYAKLGKLDT 543
Query: 399 SVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSV 458
+ + + + +++ + + F M+D G+ DEV + + A
Sbjct: 544 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA--C 601
Query: 459 SASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFT 518
+ Q +H A SG D +L+ YSRCG +E S FE + + I +
Sbjct: 602 AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWN 661
Query: 519 SMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSV 578
++++G+ ++G ++ L V M +G+ + TF A+ + T +K+G K V
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG-------KQV 714
Query: 579 HGV 581
H V
Sbjct: 715 HAV 717
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/562 (25%), Positives = 257/562 (45%), Gaps = 19/562 (3%)
Query: 85 DAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRETST-- 142
D ++ DL A VF MP R T+N +I + +L GE+ L +R S
Sbjct: 128 DFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELA-----SRNLIGEVFGLFVRMVSENV 182
Query: 143 -----TFSSVLAVCARSGFHREGV-QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
TFS VL C + V Q+H R++ G + V L+ Y G ++AR
Sbjct: 183 TPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLAR 242
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
+FD L ++ + W ++ G + C E++ + M G+ P F +L C
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV 316
L G++L +LK+GF S+ +V NALV Y G L+ A+ F + + +++N+L+
Sbjct: 303 SLEIGEQLHGLVLKLGF-SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
Query: 317 SVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD 376
+ + A+ELF M L G P +L L+ +CS + G+Q+H + KLGF
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFA 421
Query: 377 EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGL 436
+ + AL+++Y KC+DIE+++ F + N ++ + ++ +F
Sbjct: 422 SNN-KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
Query: 437 MIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRC 496
M E ++P++ T+ + LK + + +H +K+ + +A V L+D Y++
Sbjct: 481 MQIEEIVPNQYTYPSILK--TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKL 538
Query: 497 GHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL 556
G ++ + I + + + +T+MI GY + + L M+++G++ DE+ A+
Sbjct: 539 GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAV 598
Query: 557 TGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRD 616
+ C +KEG+ + + V G D + +V L R G QT + D
Sbjct: 599 SACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT-EAGD 656
Query: 617 CFMWSSLLRSCRSHKNEEVGTR 638
W++L+ + N E R
Sbjct: 657 NIAWNALVSGFQQSGNNEEALR 678
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 237/493 (48%), Gaps = 12/493 (2%)
Query: 136 GIRETSTTFSSVLAVCARS-GFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
GIR T +L C ++ G EG ++H +++K G SN + L FYL G
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A ++FDE+PER + WN +++ + E + RM + V PN TF +L+ C
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 255 HR-RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWN 313
+ +++ + IL G +S + V N L+D YS G + A++ F+ + +++ SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 314 SLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL 373
+++S + N+ +A+ LF M + G P+ + +L++C + E + +G+Q+H LKL
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVEL 433
GF + + +AL+ +Y ++ S+ +F ++++R N+L+ LS CG + +EL
Sbjct: 318 GFSSDT-YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 434 FGLMIDEGLMPDEVTFSTTLKALSV--SASATFTSSQLLHCFALKSGVEGDAAVACSLMD 491
F M +GL PD S TL +L V SA T Q LH + K G + + +L++
Sbjct: 377 FKRMHLDGLEPD----SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 432
Query: 492 AYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEIT 551
Y++C +E +L F N + + M+ Y + + M + + P++ T
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 552 FLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQT 611
+ L C G ++ G + + + Q + S ++D+ + G +
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 612 PDKRDCFMWSSLL 624
K D W++++
Sbjct: 552 AGK-DVVSWTTMI 563
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/623 (28%), Positives = 324/623 (52%), Gaps = 8/623 (1%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGL 134
+Y + + + K + +A VF + ++ V +N +I + E + + L+ +M
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
G TF+S+L+ CA S G Q H ++K N+FVG LV Y G E
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
AR++F+ + +R+ WN ++ + + E+ + + RM G+ +G LK C++
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
L +GK++ +K G ++ ++ ++L+D YS CG + A+K F ++P +V+S N+
Sbjct: 542 VHGLYQGKQVHCLSVKCG-LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
L++ + N+L +A+ LF M G +PS + ++ +C + E + LG Q H K G
Sbjct: 601 LIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 659
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTK-RTLECCNSLMTSLSHCGATQDVVEL 433
F + +L+ MY + + A+F L+ +++ +M+ S G ++ ++
Sbjct: 660 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 719
Query: 434 FGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAY 493
+ M +G++PD+ TF T L+ SV +S + +H + D + +L+D Y
Sbjct: 720 YKEMRHDGVLPDQATFVTVLRVCSVLSS--LREGRAIHSLIFHLAHDLDELTSNTLIDMY 777
Query: 494 SRCGHVELSLQIFETLSS-PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
++CG ++ S Q+F+ + N + + S+INGYA+NG + L + +M + + PDEITF
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 837
Query: 553 LCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTP 612
L LT C+H G V +GR +F+ M +G++ H +CMVDLL R G
Sbjct: 838 LGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQN 897
Query: 613 DKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASRE 672
K D +WSSLL +CR H ++ G +A+ L+EL+P + + ++ SN YA G ++ +
Sbjct: 898 LKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANA 957
Query: 673 IREVALARKMTREIGHSSIEIRQ 695
+R+V R + + G+S I++ Q
Sbjct: 958 LRKVMRDRGVKKVPGYSWIDVEQ 980
Score = 225 bits (574), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 154/546 (28%), Positives = 261/546 (47%), Gaps = 12/546 (2%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETS 141
I+ +I+ L A +F M D V +N++IS A+ + M ++ T
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
+T SVL+ G+ VH +K G SN++VG +LV Y E A ++F+
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
L E+N WN ++RG+ G + + + M G + TF LL C+ L G
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
+ S I+K + N+FV NALVD Y+ CG L A++ FE + + ++WN+++
Sbjct: 448 SQFHSIIIKKKLAK-NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
++ +A +LF M L G L L +C+ + GKQ+HC ++K G D +H
Sbjct: 507 DENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR-DLH 565
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
S+LIDMY KC I+ + VF SL + ++ N+L+ S + VV LF M+ G
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTRG 624
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAA-VACSLMDAYSRCGHVE 500
+ P E+TF+T ++A S T + H K G + + SL+ Y +
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQ--FHGQITKRGFSSEGEYLGISLLGMYMNSRGMT 682
Query: 501 LSLQIFETLSSPNAIC-FTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGC 559
+ +F LSSP +I +T M++G+++NG ++ L M G+ PD+ TF+ L C
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 560 NHTGMVKEGRILFDSMKSV-HGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCF 618
+ ++EGR + + + H + D+ + ++D+ + G + + +
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDL--DELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVV 800
Query: 619 MWSSLL 624
W+SL+
Sbjct: 801 SWNSLI 806
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/527 (23%), Positives = 224/527 (42%), Gaps = 55/527 (10%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCF--PPEQALHLYGEMGLLGIR 138
N +D + K ++ A F + +D +N ++S + P + L + + I
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
TFS VL+ CAR G Q+HC ++K G N + GG LV Y AR +
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
F+ + + N W L G+ + G EE++ + RM +G P+ + F
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV------------ 265
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSV 318
+++ Y G L A+ F + +V++WN ++S
Sbjct: 266 ------------------------TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 319 NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG 378
+ A+E F M+ + +L +L++ + LG +H A+KLG
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL-AS 360
Query: 379 SVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMI 438
+++ S+L+ MY KC +E++ VFE+L ++ N+++ +H G + V+ELF M
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 439 DEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGH 498
G D+ TF++ L + +AS H +K + + V +L+D Y++CG
Sbjct: 421 SSGYNIDDFTFTSLLS--TCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 499 VELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTG 558
+E + QIFE + + + + ++I Y ++ + + M G+ D L
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 559 CNHTGMVKEGRILFDSMKSVH------GVQPDQRHFSCMVDLLCRAG 599
C H + +G K VH G+ D S ++D+ + G
Sbjct: 539 CTHVHGLYQG-------KQVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 123/232 (53%), Gaps = 11/232 (4%)
Query: 362 LGKQIHCHALKLGFD-EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
+GK +H +L LG D EG + +A++D+Y KC+ + + F+ L K + NS+++
Sbjct: 78 IGKAVHSKSLILGIDSEGRL--GNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSM 134
Query: 421 LSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
S G V+ F + + + P++ TFS L + + F + +HC +K G+E
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEF--GRQIHCSMIKMGLE 192
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAM 540
++ +L+D Y++C + + ++FE + PN +C+T + +GY + G+ ++ + V M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 541 VEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMV 592
++G +PD + F+ + G +K+ R+LF M S PD ++ M+
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMI 299
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 160/382 (41%), Gaps = 46/382 (12%)
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
L GK + S L +G ++S + NA+VD Y+ C + A+K F+ + ++V +WNS++S
Sbjct: 76 LRIGKAVHSKSLILG-IDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 318 VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDE 377
+ + L F + P+ + +L++C+R + G+QIHC +K+G +
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 378 GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLM 437
S + AL+DMY KC I + VFE + C L + G ++ V +F M
Sbjct: 194 NS-YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 438 IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCG 497
DEG PD + F T +++ Y R G
Sbjct: 253 RDEGHRPDHLAFVT-------------------------------------VINTYIRLG 275
Query: 498 HVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALT 557
++ + +F +SSP+ + + MI+G+ + G + M + +K T L+
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 558 GCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDC 617
+ G ++ + G+ + S +V + + +K D
Sbjct: 336 AIGIVANLDLGLVVHAEAIKL-GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV 394
Query: 618 FMWSSLLR----SCRSHKNEEV 635
F W++++R + SHK E+
Sbjct: 395 F-WNAMIRGYAHNGESHKVMEL 415
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/611 (30%), Positives = 320/611 (52%), Gaps = 10/611 (1%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETS 141
+D + K + A+ VF +P V++ +++S + + AL ++ EM G+ +
Sbjct: 292 VDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINN 351
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
T +SV++ C R E QVH V K GF + V L+ Y G +++ ++F++
Sbjct: 352 CTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFED 411
Query: 202 LPE-RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE 260
L + + + NV++ F + +++ ++RM +G+ + + C LL V LN
Sbjct: 412 LDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC---LNL 468
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNA 320
GK++ LK G V ++ V ++L YS CG L + K F+ IP ++ W S++S
Sbjct: 469 GKQVHGYTLKSGLV-LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFN 527
Query: 321 DNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSV 380
+ L +A+ LF+ M G SP +L +L CS + GK+IH + L+ G D+G +
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG-M 586
Query: 381 HAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDE 440
SAL++MY KC ++ + V++ L + C+SL++ S G QD LF M+
Sbjct: 587 DLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS 646
Query: 441 GLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE 500
G D S+ LKA ++S ++ + +H + K G+ + +V SL+ YS+ G ++
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQ--VHAYITKIGLCTEPSVGSSLLTMYSKFGSID 704
Query: 501 LSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCN 560
+ F ++ P+ I +T++I YA++G + L V + M EKG KPD++TF+ L+ C+
Sbjct: 705 DCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS 764
Query: 561 HTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMW 620
H G+V+E +SM +G++P+ RH+ CMVD L R+G K D +W
Sbjct: 765 HGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVW 824
Query: 621 SSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALAR 680
+LL +C+ H E+G AA+ +EL+P D ++ SN AE+G +D E R++
Sbjct: 825 GTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGT 884
Query: 681 KMTREIGHSSI 691
+ +E G SS+
Sbjct: 885 GVQKEPGWSSV 895
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 238/513 (46%), Gaps = 23/513 (4%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW----CFPPEQALHL 128
P D TK+ + + S + A +F T+P D V+ N++IS + F E++L
Sbjct: 81 PFDVFLTKSL-LSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLF--EESLRF 137
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+ +M LG ++ SV++ C+ V C +K G+ V L+ +
Sbjct: 138 FSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK 197
Query: 189 VGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
E A ++F + N+ WN ++ G + + MC +P+ T+ +
Sbjct: 198 NLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSV 257
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVEN 308
L C++ +L GK +Q+ ++K G ++FV A+VD Y+ CG + A + F IP +
Sbjct: 258 LAACASLEKLRFGKVVQARVIKCG--AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS 315
Query: 309 VISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHC 368
V+SW ++S ++ ALE+F M+ G + ++ ++++C R + Q+H
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHA 375
Query: 369 HALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTK-RTLECCNSLMTSLSHCGAT 427
K GF S A +ALI MY K DI+ S VFE L + N ++TS S
Sbjct: 376 WVFKSGFYLDSSVA-AALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKP 434
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVAC 487
+ LF M+ EGL DE + + L L + +H + LKSG+ D V
Sbjct: 435 GKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC-----LNLGKQVHGYTLKSGLVLDLTVGS 489
Query: 488 SLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKP 547
SL YS+CG +E S ++F+ + + C+ SMI+G+ G ++ + + M++ G P
Sbjct: 490 SLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSP 549
Query: 548 DEITFLCALTGCNHTGMVKEGRILFDSMKSVHG 580
DE T LT C+ + G K +HG
Sbjct: 550 DESTLAAVLTVCSSHPSLPRG-------KEIHG 575
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 153/318 (48%), Gaps = 6/318 (1%)
Query: 253 SNHR--RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVI 310
SN R L K LQ+ +L+ + ++F+ +L+ +YS G + A K F+ IP +V+
Sbjct: 57 SNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVV 116
Query: 311 SWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
S N ++S + L ++L F+ M G + S ++++CS + + + CH
Sbjct: 117 SCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHT 176
Query: 371 LKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
+K+G+ V +SALID++ K E + VF + C N+++ V
Sbjct: 177 IKMGYFFYEV-VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAV 235
Query: 431 VELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLM 490
+LF M PD T+S+ L A + F +++ +K G E D V +++
Sbjct: 236 FDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRF--GKVVQARVIKCGAE-DVFVCTAIV 292
Query: 491 DAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEI 550
D Y++CGH+ ++++F + +P+ + +T M++GY ++ L + M G++ +
Sbjct: 293 DLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNC 352
Query: 551 TFLCALTGCNHTGMVKEG 568
T ++ C MV E
Sbjct: 353 TVTSVISACGRPSMVCEA 370
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/616 (28%), Positives = 320/616 (51%), Gaps = 12/616 (1%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETS 141
+D ++K + VF M R+ VT+ LIS + ++ L L+ M G + S
Sbjct: 135 VDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNS 194
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
TF++ L V A G G+QVH VVK G + V +L+ YL G AR LFD+
Sbjct: 195 FTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK 254
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+++ WN ++ G+ G E+L + M + V + +F ++K+C+N + L
Sbjct: 255 TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFT 314
Query: 262 KKLQSCILKMGFV-ESNIFVANALVDFYSACGCLVGAKKSFEAIP-VENVISWNSLVSVN 319
++L ++K GF+ + NI AL+ YS C ++ A + F+ I V NV+SW +++S
Sbjct: 315 EQLHCSVVKYGFLFDQNI--RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 320 ADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGS 379
ND +A++LF+ M+ G P+ + +L A + ++H +K ++ S
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT----ALPVISPSEVHAQVVKTNYERSS 428
Query: 380 VHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMID 439
+AL+D Y K +E + VF + + + ++++ + G T+ +++FG +
Sbjct: 429 T-VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 440 EGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHV 499
G+ P+E TFS+ L + + +A+ + H FA+KS ++ V+ +L+ Y++ G++
Sbjct: 488 GGIKPNEFTFSSILNVCAAT-NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNI 546
Query: 500 ELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGC 559
E + ++F+ + + + SMI+GYA++G + L V M ++ +K D +TF+ C
Sbjct: 547 ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606
Query: 560 NHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFM 619
H G+V+EG FD M + P + H SCMVDL RAG P+ +
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI 666
Query: 620 WSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALA 679
W ++L +CR HK E+G AA+ ++ + P+D A ++ SN YAE G++ ++R++
Sbjct: 667 WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 726
Query: 680 RKMTREIGHSSIEIRQ 695
R + +E G+S IE++
Sbjct: 727 RNVKKEPGYSWIEVKN 742
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 249/480 (51%), Gaps = 15/480 (3%)
Query: 88 IKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETSTTFS 145
+ S L +A +F P RD +Y L+ + ++A L+ + LG+ + FS
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 146 SVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER 205
SVL V A G Q+HC+ +KFGFL +V VG +LV Y+ + R++FDE+ ER
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 206 NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQ 265
N+ W L+ G+ +E L + RM +G +PN TF L V + G ++
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 266 SCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLL 325
+ ++K G ++ I V+N+L++ Y CG + A+ F+ V++V++WNS++S A N L
Sbjct: 218 TVVVKNG-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 326 CDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG--FDEGSVHAQ 383
+AL +F M+L S S ++ C+ +E+ +Q+HC +K G FD+ + +
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ---NIR 333
Query: 384 SALIDMYGKCSDIESSVAVFESLT-KRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGL 442
+AL+ Y KC+ + ++ +F+ + + ++++ ++ V+LF M +G+
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 443 MPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELS 502
P+E T+S L AL V S +H +K+ E + V +L+DAY + G VE +
Sbjct: 394 RPNEFTYSVILTALPV------ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 503 LQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHT 562
++F + + + +++M+ GYA+ G + + + + + G+KP+E TF L C T
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/635 (30%), Positives = 330/635 (51%), Gaps = 16/635 (2%)
Query: 62 IRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP 121
I +TT+ CV N + + K+ ++AL +F + D V++N ++S F
Sbjct: 98 IHGFSTTSGFTSFVCV--SNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG--FD 153
Query: 122 PEQ-ALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGG 180
Q AL+ M G+ + T+S+ L+ C S G+Q+ VVK G S++ VG
Sbjct: 154 DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGN 213
Query: 181 TLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVE-ESLNYYSRMCFDGVE 239
+ + Y G AR +FDE+ +++ WN LL G + G E++ + M +GVE
Sbjct: 214 SFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE 273
Query: 240 PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKK 299
+ V+F ++ C + L +++ +K G+ ES + V N L+ YS CG L K
Sbjct: 274 LDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY-ESLLEVGNILMSRYSKCGVLEAVKS 332
Query: 300 SFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
F + NV+SW +++S N D DA+ +F M+ G P+ + VGL+N+ E+
Sbjct: 333 VFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQ 387
Query: 360 IGLGKQIHCHALKLGF-DEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLM 418
I G +IH +K GF E SV ++ I +Y K +E + FE +T R + N+++
Sbjct: 388 IKEGLKIHGLCIKTGFVSEPSV--GNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 445
Query: 419 TSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSG 478
+ + G + + +++F L MP+E TF + L A++ + + Q H LK G
Sbjct: 446 SGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLG 504
Query: 479 VEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLH 538
+ V+ +L+D Y++ G+++ S ++F +S N +TS+I+ Y+ +G + + + H
Sbjct: 505 LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFH 564
Query: 539 AMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRA 598
M+++ + PD +TFL LT CN GMV +G +F+ M V+ ++P H+SCMVD+L RA
Sbjct: 565 KMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRA 624
Query: 599 GXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQAS 658
G + P M S+L SCR H N ++G + A++ +E+ P+ ++Q
Sbjct: 625 GRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMY 684
Query: 659 NFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
N YAE +D + EIR+ + +++E G S I++
Sbjct: 685 NIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/519 (25%), Positives = 242/519 (46%), Gaps = 23/519 (4%)
Query: 122 PEQALHLYGE---MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFV 178
P +AL ++ E +G G T L C G + G Q+H GF S V V
Sbjct: 56 PARALSIFKENLQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCV 113
Query: 179 GGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGV 238
++G Y G + A +F+ L + ++ WN +L GF + + +LN+ RM GV
Sbjct: 114 SNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD---NQIALNFVVRMKSAGV 170
Query: 239 EPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAK 298
+ T+ L C G +LQS ++K G +ES++ V N+ + YS G GA+
Sbjct: 171 VFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG-LESDLVVGNSFITMYSRSGSFRGAR 229
Query: 299 KSFEAIPVENVISWNSLVS-VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRA 357
+ F+ + +++ISWNSL+S ++ + +A+ +F M G S ++ +C
Sbjct: 230 RVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289
Query: 358 EEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSL 417
++ L +QIH +K G+ E + + L+ Y KC +E+ +VF +++R + ++
Sbjct: 290 TDLKLARQIHGLCIKRGY-ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTM 348
Query: 418 MTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS 477
++S D V +F M +G+ P+EVTF + A V + +H +K+
Sbjct: 349 ISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINA--VKCNEQIKEGLKIHGLCIKT 401
Query: 478 GVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVL 537
G + +V S + Y++ +E + + FE ++ I + +MI+G+A+NG + L +
Sbjct: 402 GFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF 461
Query: 538 HAMVEKGLKPDEITFLCALTGCNHTG--MVKEGRILFDSMKSVHGVQPDQRHFSCMVDLL 595
+ + + P+E TF L VK+G+ + + G+ S ++D+
Sbjct: 462 LSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL-GLNSCPVVSSALLDMY 519
Query: 596 CRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEE 634
+ G + K F+W+S++ + SH + E
Sbjct: 520 AKRGNIDESEKVFNEMSQKNQ-FVWTSIISAYSSHGDFE 557
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 187/635 (29%), Positives = 327/635 (51%), Gaps = 25/635 (3%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYG 130
P + N I +K+ D++SA +F MP R VT+ +L+ + ++A L+
Sbjct: 75 PHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFR 134
Query: 131 EMGLLGIRETS------TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVF--VGGTL 182
+M R +S TF+++L C + QVH VK GF +N F V L
Sbjct: 135 QM----CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVL 190
Query: 183 VGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNG 242
+ Y V ++A LF+E+PE++ +N L+ G+ + G ES++ + +M G +P+
Sbjct: 191 LKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSD 250
Query: 243 VTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFE 302
TF +LK G++L + + GF + V N ++DFYS ++ + F+
Sbjct: 251 FTFSGVLKAVVGLHDFALGQQLHALSVTTGF-SRDASVGNQILDFYSKHDRVLETRMLFD 309
Query: 303 AIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
+P + +S+N ++S + D +L F MQ G +L+ + + +
Sbjct: 310 EMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM 369
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLS 422
G+Q+HC AL L + +H ++L+DMY KC E + +F+SL +RT +L++
Sbjct: 370 GRQLHCQAL-LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYV 428
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTS---SQLLHCFALKSGV 479
G ++LF M L D+ TF+T LKA SA+F S + LH F ++SG
Sbjct: 429 QKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA-----SASFASLLLGKQLHAFIIRSGN 483
Query: 480 EGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHA 539
+ L+D Y++CG ++ ++Q+FE + NA+ + ++I+ +A NG G+ +
Sbjct: 484 LENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAK 543
Query: 540 MVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
M+E GL+PD ++ L LT C+H G V++G F +M ++G+ P ++H++CM+DLL R G
Sbjct: 544 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 603
Query: 600 XXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDP-DDPAVWLQAS 658
+ P + D MWSS+L +CR HKN+ + RAA+ L ++ D A ++ S
Sbjct: 604 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMS 663
Query: 659 NFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
N YA G ++ R++++ R + + +S +E+
Sbjct: 664 NIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEV 698
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 183/651 (28%), Positives = 329/651 (50%), Gaps = 13/651 (1%)
Query: 52 QRHQSLSFSFIRAQTTTTPRNPSDCVYTK---NREIDAFIKSRDLNSALAVFHTMPLRDT 108
QR + S S ++ S+ V K N + + I + +L +A VF MP D
Sbjct: 12 QRFCTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDI 71
Query: 109 VTYNLLISAWCFP--PEQALHLYGEMGLL--GIRETSTTFSSVLAVCARSGFHREGVQVH 164
V++ +I + ++AL L+ M ++ + ++ S VL C +S G +H
Sbjct: 72 VSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLH 131
Query: 165 CRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVE 224
VK LS+V+VG +L+ Y VG + + +F E+P RN W ++ G G +
Sbjct: 132 AYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYK 191
Query: 225 ESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANAL 284
E L Y+S M + TF LK C+ R++ GK + + ++ GFV + + VAN+L
Sbjct: 192 EGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFV-TTLCVANSL 250
Query: 285 VDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSV 344
Y+ CG + FE + +V+SW SL+ A+E F M+ P+
Sbjct: 251 ATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNE 310
Query: 345 RSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFE 404
++ + ++C+ + G+Q+HC+ L LG ++ S+ ++++ MY C ++ S+ +F+
Sbjct: 311 QTFASMFSACASLSRLVWGEQLHCNVLSLGLND-SLSVSNSMMKMYSTCGNLVSASVLFQ 369
Query: 405 SLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSAS-AT 463
+ R + ++++ G ++ + F M G P + ++ L SVS + A
Sbjct: 370 GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLL---SVSGNMAV 426
Query: 464 FTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMING 523
+ +H AL G+E ++ V SL++ YS+CG ++ + IF + + T+MING
Sbjct: 427 IEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486
Query: 524 YARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQP 583
YA +G K+ + + ++ G +PD +TF+ LT C H+G + G F+ M+ + ++P
Sbjct: 487 YAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRP 546
Query: 584 DQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVL 643
+ H+ CMVDLLCRAG + K+D +W++LL +C++ + E G RAA+ +
Sbjct: 547 AKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERI 606
Query: 644 VELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
+ELDP + +N Y+ GN + + +R+ A+ + +E G SSI+I+
Sbjct: 607 LELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIK 657
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 292/545 (53%), Gaps = 20/545 (3%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGF------YLNVGLREVARELFDELPERNLAVWNVLLR 215
Q+H ++K + NV L+ F +N+ AR +F+ + ++ +WN ++R
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNL---SYARSVFESIDCPSVYIWNSMIR 80
Query: 216 GFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVE 275
G+ +++L +Y M G P+ TF Y+LK CS R + G + ++K GF E
Sbjct: 81 GYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGF-E 139
Query: 276 SNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVM 335
N++V+ L+ Y CG + + FE IP NV++W SL+S +N+ DA+E F M
Sbjct: 140 VNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREM 199
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG-------SVHAQSALID 388
Q G + +V LL +C R ++I GK H LGFD +V ++LID
Sbjct: 200 QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLID 259
Query: 389 MYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVT 448
MY KC D+ ++ +F+ + +RTL NS++T S G ++ + +F M+D G+ PD+VT
Sbjct: 260 MYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVT 319
Query: 449 FSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFET 508
F + ++A + + Q +H + K+G DAA+ C+L++ Y++ G E + + FE
Sbjct: 320 FLSVIRASMIQGCSQL--GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFED 377
Query: 509 LSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKG-LKPDEITFLCALTGCNHTGMVKE 567
L + I +T +I G A +G G + L++ M EKG PD IT+L L C+H G+V+E
Sbjct: 378 LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEE 437
Query: 568 GRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSC 627
G+ F M+ +HG++P H+ CMVD+L RAG P K + +W +LL C
Sbjct: 438 GQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGC 497
Query: 628 RSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIG 687
H+N E+ R ++ E + +++ SN YA+ G + + IRE ++++ + +G
Sbjct: 498 DIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLG 557
Query: 688 HSSIE 692
HSS+E
Sbjct: 558 HSSVE 562
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 205/451 (45%), Gaps = 23/451 (5%)
Query: 89 KSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSS 146
++ +L+ A +VF ++ +N +I + P ++AL Y EM G TF
Sbjct: 53 ETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPY 112
Query: 147 VLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERN 206
VL C+ + G VH VVK GF N++V L+ Y+ G +F+++P+ N
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN 172
Query: 207 LAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQS 266
+ W L+ GF +++ + M +GV+ N LL C + + GK
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 267 CILKMGF-------VESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVN 319
+ +GF V N+ +A +L+D Y+ CG L A+ F+ +P ++SWNS+++
Sbjct: 233 FLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGY 292
Query: 320 ADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGS 379
+ N +AL +F M G +P + + ++ + LG+ IH + K GF + +
Sbjct: 293 SQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDA 352
Query: 380 VHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMID 439
AL++MY K D ES+ FE L K+ ++ L+ G + + +F M +
Sbjct: 353 AIV-CALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQE 411
Query: 440 EG-LMPDEVTFSTTLKA-----LSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAY 493
+G PD +T+ L A L F + LH G+E ++D
Sbjct: 412 KGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH------GLEPTVEHYGCMVDIL 465
Query: 494 SRCGHVELSLQIFETLS-SPNAICFTSMING 523
SR G E + ++ +T+ PN + +++NG
Sbjct: 466 SRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 182/621 (29%), Positives = 306/621 (49%), Gaps = 68/621 (10%)
Query: 141 STTFSSVLAVCARSGFHREGVQ-VHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
S+ F+ +L C +S V+ VH V+K GF + +F+ L+ Y G E R++F
Sbjct: 19 SSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVF 78
Query: 200 DELPERNLAVWNVLLRGFCELGCV-------------------------------EESLN 228
D++P+RN+ WN ++ G +LG + EE+L
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 229 YYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFY 288
Y++ M +G N +F +L CS +N+G ++ S I K F+ S++++ +ALVD Y
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL-SDVYIGSALVDMY 197
Query: 289 SACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLV 348
S CG + A++ F+ + NV+SWNSL++ N +AL++F +M P +L
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 349 GLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESL-- 406
++++C+ I +G+++H +K + +A +DMY KCS I+ + +F+S+
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 407 -----------------------------TKRTLECCNSLMTSLSHCGATQDVVELFGLM 437
+R + N+L+ + G ++ + LF L+
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 438 IDEGLMPDEVTFSTTLKALSVSASATFTSSQ----LLHCFALKSGVEGDAAVACSLMDAY 493
E + P +F+ LKA + A L H F +SG E D V SL+D Y
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 494 SRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFL 553
+CG VE +F + + + + +MI G+A+NG G + L + M+E G KPD IT +
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
Query: 554 CALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPD 613
L+ C H G V+EGR F SM GV P + H++CMVDLL RAG + P
Sbjct: 498 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM 557
Query: 614 KRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREI 673
+ D +W SLL +C+ H+N +G A+ L+E++P + ++ SN YAE+G ++ +
Sbjct: 558 QPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNV 617
Query: 674 REVALARKMTREIGHSSIEIR 694
R+ +T++ G S I+I+
Sbjct: 618 RKSMRKEGVTKQPGCSWIKIQ 638
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 235/496 (47%), Gaps = 52/496 (10%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHL 128
+ P +YT N + K L+ A ++F +MP RD T+N ++S + E+AL
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+ M G +F+SVL+ C+ +GVQVH + K FLS+V++G LV Y
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 189 VGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
G A+ +FDE+ +RN+ WN L+ F + G E+L+ + M VEP+ VT +
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVEN 308
+ C++ + G+++ ++K + ++I ++NA VD Y+ C + A+ F+++P+ N
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 309 VI-------------------------------SWNSLVSVNADNDLLCDALELFTVMQL 337
VI SWN+L++ N +AL LF +++
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 338 WGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGF-----DEGSVHAQSALIDMYGK 392
P+ S +L +C+ E+ LG Q H H LK GF +E + ++LIDMY K
Sbjct: 380 ESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 393 CSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTT 452
C +E VF + +R N+++ + G + +ELF M++ G PD +T
Sbjct: 440 CGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM--- 496
Query: 453 LKALSVSASATFTSSQLLHCFALKSGVEGDAAVA------CSLMDAYSRCGHVELSLQIF 506
+ LS A F + H F S + D VA ++D R G +E + +
Sbjct: 497 IGVLSACGHAGFV-EEGRHYF---SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMI 552
Query: 507 ETLS-SPNAICFTSMI 521
E + P+++ + S++
Sbjct: 553 EEMPMQPDSVIWGSLL 568
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/608 (29%), Positives = 321/608 (52%), Gaps = 11/608 (1%)
Query: 92 DLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLA 149
DL A VF + + + +N+L++ + ++ L+ +M G+ S TFS V
Sbjct: 144 DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 150 VCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAV 209
+ G Q+H ++K GF VG +LV FYL + AR++FDE+ ER++
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
WN ++ G+ G E+ L+ + +M G+E + T + C++ R ++ G+ + S +
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
K F + F N L+D YS CG L AK F + +V+S+ S+++ A L +A+
Sbjct: 324 KACFSREDRF-CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH--CHALKLGFDEGSVHAQSALI 387
+LF M+ G SP V ++ +LN C+R + GK++H LGFD + +AL+
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD---IFVSNALM 439
Query: 388 DMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG-LMPDE 446
DMY KC ++ + VF + + + N+++ S + + LF L+++E PDE
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 447 VTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIF 506
T + L A ++ + F + +H + +++G D VA SL+D Y++CG + L+ +F
Sbjct: 500 RTVACVLPA--CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 507 ETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVK 566
+ ++S + + +T MI GY +G GK+ +A+ + M + G++ DEI+F+ L C+H+G+V
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 617
Query: 567 EGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRS 626
EG F+ M+ ++P H++C+VD+L R G P D +W +LL
Sbjct: 618 EGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Query: 627 CRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREI 686
CR H + ++ + A+ + EL+P++ ++ +N YAE ++ + +R+ R + +
Sbjct: 678 CRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNP 737
Query: 687 GHSSIEIR 694
G S IEI+
Sbjct: 738 GCSWIEIK 745
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 226/458 (49%), Gaps = 6/458 (1%)
Query: 143 TFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL 202
T SVL +CA S ++G +V + GF+ + +G L Y N G + A +FDE+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 203 PERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGK 262
WN+L+ + G S+ + +M GVE + TF + K S+ R ++ G+
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 263 KLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADN 322
+L ILK GF E N V N+LV FY + A+K F+ + +VISWNS+++ N
Sbjct: 216 QLHGFILKSGFGERNS-VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 323 DLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHA 382
L L +F M + G + ++V + C+ + I LG+ +H +K F
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 383 QSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGL 442
+ L+DMY KC D++S+ AVF ++ R++ S++ + G + V+LF M +EG+
Sbjct: 335 NT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 443 MPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELS 502
PD T + L + + +H + ++ + D V+ +LMD Y++CG ++ +
Sbjct: 394 SPDVYTVTAVLNC--CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 503 LQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMV-EKGLKPDEITFLCALTGCNH 561
+F + + I + ++I GY++N + L++ + ++ EK PDE T C L C
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 562 TGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+GR + + +G D+ + +VD+ + G
Sbjct: 512 LSAFDKGREIHGYIMR-NGYFSDRHVANSLVDMYAKCG 548
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 164/332 (49%), Gaps = 10/332 (3%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIR 138
N +D + K DL+SA AVF M R V+Y +I+ + +A+ L+ EM GI
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
T ++VL CAR EG +VH + + ++FV L+ Y G + A +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVCSNHRR 257
F E+ +++ WN ++ G+ + E+L+ ++ + + P+ T +L C++
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
++G+++ I++ G+ S+ VAN+LVD Y+ CG L+ A F+ I ++++SW +++
Sbjct: 515 FDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 318 VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ---IHCHALKLG 374
+ +A+ LF M+ G S V LL +CS + + G + I H K+
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI- 632
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESL 406
E +V + ++DM + D+ + E++
Sbjct: 633 --EPTVEHYACIVDMLARTGDLIKAYRFIENM 662
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 299 bits (765), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 328/625 (52%), Gaps = 11/625 (1%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGL 134
+Y NR +D++IK L A +F MP RD+V++N +IS + C E A L+ M
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKR 94
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
G +FS +L A G QVH V+K G+ NV+VG +LV Y E
Sbjct: 95 SGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVED 154
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVCS 253
A E F E+ E N WN L+ GF ++ ++ + M V + TF LL +
Sbjct: 155 AFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLD 214
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP-VENVISW 312
+ N K++ + +LK+G ++ I + NA++ Y+ CG + AK+ F+ + +++ISW
Sbjct: 215 DPMFCNLLKQVHAKVLKLG-LQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISW 273
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
NS+++ + ++L A ELF MQ + + GLL++CS E GK +H +K
Sbjct: 274 NSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIK 333
Query: 373 LGFDEGSVHAQSALIDMYGK--CSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
G ++ + A +ALI MY + +E ++++FESL + L NS++T + G ++D
Sbjct: 334 KGLEQVT-SATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDA 392
Query: 431 VELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLM 490
V+ F + + D+ FS L+ S S AT Q +H A KSG + V SL+
Sbjct: 393 VKFFSYLRSSEIKVDDYAFSALLR--SCSDLATLQLGQQIHALATKSGFVSNEFVISSLI 450
Query: 491 DAYSRCGHVELSLQIFETLSSPNA-ICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDE 549
YS+CG +E + + F+ +SS ++ + + +MI GYA++G+G+ L + M + +K D
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDH 510
Query: 550 ITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXX 609
+TF LT C+HTG+++EG L + M+ V+ +QP H++ VDLL RAG
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIE 570
Query: 610 QTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDA 669
P D + + L CR+ E+ T+ A L+E++P+D ++ S+ Y+++ ++
Sbjct: 571 SMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEE 630
Query: 670 SREIREVALARKMTREIGHSSIEIR 694
++++ R + + G S IEIR
Sbjct: 631 KASVKKMMKERGVKKVPGWSWIEIR 655
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 220/471 (46%), Gaps = 9/471 (1%)
Query: 164 HCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCV 223
HC +K G +S+++V ++ Y+ G A LFDE+P+R+ WN ++ G+ G +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 224 EESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANA 283
E++ ++ M G + +G +F LLK ++ +R + G+++ ++K G+ E N++V ++
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY-ECNVYVGSS 141
Query: 284 LVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ-SP 342
LVD Y+ C + A ++F+ I N +SWN+L++ + A L +M++ +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 343 SVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAV 402
+ LL L KQ+H LKLG + + +A+I Y C + + V
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL-QHEITICNAMISSYADCGSVSDAKRV 260
Query: 403 FESL-TKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSAS 461
F+ L + L NS++ S + ELF M + D T++ L A S
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEH 320
Query: 462 ATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSR--CGHVELSLQIFETLSSPNAICFTS 519
F S LH +K G+E + +L+ Y + G +E +L +FE+L S + I + S
Sbjct: 321 QIFGKS--LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 520 MINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVH 579
+I G+A+ G+ + + + +K D+ F L C+ ++ G+ + ++ +
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI-HALATKS 437
Query: 580 GVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSH 630
G ++ S ++ + + G Q K W++++ H
Sbjct: 438 GFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/619 (29%), Positives = 324/619 (52%), Gaps = 7/619 (1%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGL 134
++ N +D + + L A VF MP+RD V++N LIS + E+AL +Y E+
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN 200
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
I S T SSVL ++G +H +K G S V V LV YL
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
AR +FDE+ R+ +N ++ G+ +L VEES+ + D +P+ +T +L+ C +
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGH 319
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
R L+ K + + +LK GFV + V N L+D Y+ CG ++ A+ F ++ ++ +SWNS
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
++S + L +A++LF +M + + + + L++ +R ++ GK +H + +K G
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF 434
+ +ALIDMY KC ++ S+ +F S+ N+++++ G +++
Sbjct: 439 ICI-DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYS 494
M ++PD TF TL + A+ + +HC L+ G E + + +L++ YS
Sbjct: 498 TQMRKSEVVPDMATFLVTLPMCASLAAKRL--GKEIHCCLLRFGYESELQIGNALIEMYS 555
Query: 495 RCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
+CG +E S ++FE +S + + +T MI Y G G++ L M + G+ PD + F+
Sbjct: 556 KCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIA 615
Query: 555 ALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDK 614
+ C+H+G+V EG F+ MK+ + + P H++C+VDLL R+ P K
Sbjct: 616 IIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIK 675
Query: 615 RDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIR 674
D +W+S+LR+CR+ + E R ++ ++EL+PDDP + ASN YA + +D IR
Sbjct: 676 PDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIR 735
Query: 675 EVALARKMTREIGHSSIEI 693
+ + +T+ G+S IE+
Sbjct: 736 KSLKDKHITKNPGYSWIEV 754
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 248/492 (50%), Gaps = 14/492 (2%)
Query: 84 IDAFIKSRDLNSALAVFHTM-PLRDTVTYNLLISAWC----FPPEQALHLYGEMGLLGIR 138
ID + R+ S+L+VF + P ++ +N +I A+ FP +AL YG++ +
Sbjct: 46 IDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFP--EALEFYGKLRESKVS 103
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
TF SV+ CA G V+ +++ GF S++FVG LV Y +GL AR++
Sbjct: 104 PDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
FDE+P R+L WN L+ G+ G EE+L Y + + P+ T +L N +
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSV 318
+G+ L LK V S + V N LV Y A++ F+ + V + +S+N+++
Sbjct: 224 KQGQGLHGFALKS-GVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICG 282
Query: 319 NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG 378
+++ +++ +F + L P + ++ +L +C ++ L K I+ + LK GF
Sbjct: 283 YLKLEMVEESVRMF-LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLE 341
Query: 379 SVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMI 438
S ++ LID+Y KC D+ ++ VF S+ + NS+++ G + ++LF +M+
Sbjct: 342 ST-VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 439 DEGLMPDEVTFSTTLKALSVSAS-ATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCG 497
+M ++ T L +SVS A + LH +KSG+ D +V+ +L+D Y++CG
Sbjct: 401 ---IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCG 457
Query: 498 HVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALT 557
V SL+IF ++ + + + + ++I+ R G GL V M + + PD TFL L
Sbjct: 458 EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLP 517
Query: 558 GCNHTGMVKEGR 569
C + G+
Sbjct: 518 MCASLAAKRLGK 529
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 3/182 (1%)
Query: 450 STTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL 509
S+ + ++S+S+ + +H + G++ + L+D YS SL +F +
Sbjct: 6 SSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV 65
Query: 510 S-SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
S + N + S+I +++NG+ + L + E + PD+ TF + C + G
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 569 RILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCR 628
++++ + + G + D + +VD+ R G + P RD W+SL+
Sbjct: 126 DLVYEQILDM-GFESDLFVGNALVDMYSRMGLLTRARQVFDEMP-VRDLVSWNSLISGYS 183
Query: 629 SH 630
SH
Sbjct: 184 SH 185
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/636 (29%), Positives = 322/636 (50%), Gaps = 22/636 (3%)
Query: 75 DCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC-FPP-EQALHLYGEM 132
D V N ++ + K D + VF + R+ V++N LIS+ C F E AL + M
Sbjct: 131 DSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM 190
Query: 133 GLLGIRETSTTFSSVLAVCARSGFHRE---GVQVHCRVVKFGFLSNVFVGGTLVGFYLNV 189
+ +S T SV+ C+ G QVH ++ G L N F+ TLV Y +
Sbjct: 191 LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKL 249
Query: 190 GLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLL 249
G ++ L R+L WN +L C+ + E+L Y M +GVEP+ T +L
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 250 KVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV 309
CS+ L GK+L + LK G ++ N FV +ALVD Y C ++ ++ F+ + +
Sbjct: 310 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQ-LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHC 368
WN++++ + N+ +AL LF M+ G + ++ G++ +C R+ + IH
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHG 429
Query: 369 HALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQ 428
+K G D Q+ L+DMY + I+ ++ +F + R L N+++T +
Sbjct: 430 FVVKRGLDRDRF-VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 488
Query: 429 DVVELFGLM------IDEG-----LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS 477
D + L M + +G L P+ +T T L S +A + + +H +A+K+
Sbjct: 489 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP--SCAALSALAKGKEIHAYAIKN 546
Query: 478 GVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVL 537
+ D AV +L+D Y++CG +++S ++F+ + N I + +I Y +G G++ + +L
Sbjct: 547 NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLL 606
Query: 538 HAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR 597
M+ +G+KP+E+TF+ C+H+GMV EG +F MK +GV+P H++C+VDLL R
Sbjct: 607 RMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGR 666
Query: 598 AGXXXXXXXXXXQTP-DKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQ 656
AG P D WSSLL + R H N E+G AAQ L++L+P+ + ++
Sbjct: 667 AGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVL 726
Query: 657 ASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
+N Y+ G +D + E+R + + +E G S IE
Sbjct: 727 LANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 156/545 (28%), Positives = 256/545 (46%), Gaps = 32/545 (5%)
Query: 105 LRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVH 164
LR V NLL +A+ Y +M +LGI+ + F ++L A G Q+H
Sbjct: 69 LRSKVRSNLL--------REAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIH 120
Query: 165 CRVVKFGF-LSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCV 223
V KFG+ + +V V TLV Y G ++FD + ERN WN L+ C
Sbjct: 121 AHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW 180
Query: 224 EESLNYYSRMCFDGVEPNGVTFCYLLKVCSN---HRRLNEGKKLQSCILKMGFVESNIFV 280
E +L + M + VEP+ T ++ CSN L GK++ + L+ G E N F+
Sbjct: 181 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG--ELNSFI 238
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
N LV Y G L +K + ++++WN+++S N+ L +ALE M L G
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 341 SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG-FDEGSVHAQSALIDMYGKCSDIESS 399
P ++ +L +CS E + GK++H +ALK G DE S SAL+DMY C + S
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSG 357
Query: 400 VAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF-GLMIDEGLMPDEVTFSTTLKALSV 458
VF+ + R + N+++ S ++ + LF G+ GL+ + T + + A
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA--C 415
Query: 459 SASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFT 518
S F+ + +H F +K G++ D V +LMD YSR G ++++++IF + + + +
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 519 SMINGYARNGMGKQGLAVLHAM------VEKG-----LKPDEITFLCALTGCNHTGMVKE 567
+MI GY + + L +LH M V KG LKP+ IT + L C + +
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 568 GRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSC 627
G+ + + + + D S +VD+ + G Q P K + W+ ++ +
Sbjct: 536 GKEIH-AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAY 593
Query: 628 RSHKN 632
H N
Sbjct: 594 GMHGN 598
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 199/426 (46%), Gaps = 23/426 (5%)
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
W LLR + E++ Y M G++P+ F LLK ++ + + GK++ + +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
K G+ ++ VAN LV+ Y CG K F+ I N +SWNSL+S + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSR---AEEIGLGKQIHCHALKLGFDEGSVHAQSAL 386
E F M PS +LV ++ +CS E + +GKQ+H + L+ G E + + L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG--ELNSFIINTL 242
Query: 387 IDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDE 446
+ MYGK + SS + S R L N++++SL + +E M+ EG+ PDE
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 447 VTFSTTLKALSVSASATFTSSQLLHCFALKSG-VEGDAAVACSLMDAYSRCGHVELSLQI 505
T S+ L A S + + LH +ALK+G ++ ++ V +L+D Y C V ++
Sbjct: 303 FTISSVLPA--CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 506 FETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEK-GLKPDEITFLCALTGCNHTGM 564
F+ + + +MI GY++N K+ L + M E GL + T + C +G
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 565 VKEGRILFDSMKSVH------GVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCF 618
F +++H G+ D+ + ++D+ R G + D RD
Sbjct: 421 -------FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLV 472
Query: 619 MWSSLL 624
W++++
Sbjct: 473 TWNTMI 478
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 395 DIESSVAVFESL---TKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFST 451
D+ S+V+ S+ R+ E L+ S ++ V + MI G+ PD F
Sbjct: 43 DVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPA 102
Query: 452 TLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS 511
LKA++ H + GV+ VA +L++ Y +CG ++F+ +S
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVD-SVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 512 PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGM 564
N + + S+I+ + L M+++ ++P T + +T C++ M
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM 214
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 180/607 (29%), Positives = 318/607 (52%), Gaps = 18/607 (2%)
Query: 94 NSALA--VFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLL-GIRETSTTFSSVL 148
N ALA F + RD +NL+IS + + + + L G+ TF SVL
Sbjct: 101 NVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVL 160
Query: 149 AVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLA 208
C R+ +G ++HC +KFGF+ +V+V +L+ Y AR LFDE+P R++
Sbjct: 161 KAC-RTVI--DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG 217
Query: 209 VWNVLLRGFCELGCVEESLNYYSRMCFDGVEP-NGVTFCYLLKVCSNHRRLNEGKKLQSC 267
WN ++ G+C+ G +E+L +G+ + VT LL C+ N G + S
Sbjct: 218 SWNAMISGYCQSGNAKEALTLS-----NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSY 272
Query: 268 ILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCD 327
+K G +ES +FV+N L+D Y+ G L +K F+ + V ++ISWNS++ N+
Sbjct: 273 SIKHG-LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 331
Query: 328 ALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALI 387
A+ LF M+L P +L+ L + S+ +I + + L+ G+ + +A++
Sbjct: 332 AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVV 391
Query: 388 DMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG-LMPDE 446
MY K ++S+ AVF L + N++++ + G + +E++ +M +EG + ++
Sbjct: 392 VMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQ 451
Query: 447 VTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIF 506
T+ + L A S + LH LK+G+ D V SL D Y +CG +E +L +F
Sbjct: 452 GTWVSVLPA--CSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 507 ETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVK 566
+ N++ + ++I + +G G++ + + M+++G+KPD ITF+ L+ C+H+G+V
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 567 EGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRS 626
EG+ F+ M++ +G+ P +H+ CMVD+ RAG + D +W +LL +
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 627 CRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREI 686
CR H N ++G A++ L E++P+ + SN YA G ++ EIR +A + + +
Sbjct: 630 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 689
Query: 687 GHSSIEI 693
G SS+E+
Sbjct: 690 GWSSMEV 696
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 246/513 (47%), Gaps = 24/513 (4%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLG 136
VY I + + + + +A +F MP+RD ++N +IS +C L GL
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRA 244
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
+ S T S+L+ C +G GV +H +K G S +FV L+ Y G +
Sbjct: 245 M--DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
++FD + R+L WN +++ + +++ + M ++P+ +T L + S
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV 316
+ + +Q L+ G+ +I + NA+V Y+ G + A+ F +P +VISWN+++
Sbjct: 363 DIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTII 422
Query: 317 SVNADNDLLCDALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGF 375
S A N +A+E++ +M+ G+ + + + V +L +CS+A + G ++H LK G
Sbjct: 423 SGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGL 482
Query: 376 DEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFG 435
V ++L DMYGKC +E ++++F + + N+L+ G + V LF
Sbjct: 483 -YLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 436 LMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSL------ 489
M+DEG+ PD +TF T L A S S Q CF + ++ D + SL
Sbjct: 542 EMLDEGVKPDHITFVTLLSA--CSHSGLVDEGQW--CFEM---MQTDYGITPSLKHYGCM 594
Query: 490 MDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPD 548
+D Y R G +E +L+ +++S P+A + ++++ +G G + E ++P+
Sbjct: 595 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE--VEPE 652
Query: 549 EITFLCALTGCNHTGMVKEGRILFDSMKSV-HG 580
+ + L+ + EG D ++S+ HG
Sbjct: 653 HVGYHVLLSNMYASAGKWEG---VDEIRSIAHG 682
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 232/487 (47%), Gaps = 19/487 (3%)
Query: 163 VHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGC 222
+H R+V + NV + LV Y +G +AR FD + R++ WN+++ G+ G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 223 VEESLNYYSR-MCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVA 281
E + +S M G+ P+ TF +LK C R + +G K+ LK GF+ +++VA
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMW-DVYVA 188
Query: 282 NALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQS 341
+L+ YS + A+ F+ +PV ++ SWN+++S + +AL L + ++
Sbjct: 189 ASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RA 244
Query: 342 PSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVA 401
++V LL++C+ A + G IH +++K G E + + LID+Y + +
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL-ESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 402 VFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSAS 461
VF+ + R L NS++ + + LF M + PD +T + L S
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL--SQL 361
Query: 462 ATFTSSQLLHCFALKSG-VEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSM 520
+ + + F L+ G D + +++ Y++ G V+ + +F L + + I + ++
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 521 INGYARNGMGKQGLAVLHAMVEKG-LKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVH 579
I+GYA+NG + + + + M E+G + ++ T++ L C+ G +++G L + +
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK-N 480
Query: 580 GVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRA 639
G+ D + + D+ + G Q P + + W++L+ +C H G +A
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLI-AC--HGFHGHGEKA 536
Query: 640 AQVLVEL 646
+ E+
Sbjct: 537 VMLFKEM 543
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/555 (30%), Positives = 289/555 (52%), Gaps = 10/555 (1%)
Query: 146 SVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER 205
S+L VC R G +G QVHC ++K G N+ L+ Y +A ++FD +PER
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 206 NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQ 265
N+ W+ L+ G G ++ SL+ +S M G+ PN TF LK C L +G ++
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 266 SCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLL 325
LK+GF E + V N+LVD YS CG + A+K F I ++ISWN++++
Sbjct: 131 GFCLKIGF-EMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 326 CDALELFTVMQLWG--QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD-EGSVHA 382
AL+ F +MQ + P +L LL +CS I GKQIH ++ GF S
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 383 QSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGL 442
+L+D+Y KC + S+ F+ + ++T+ +SL+ + G + + LF + +
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 443 MPDEVTFSTTLKALSVSASATFTSSQLLHCFALK--SGVEGDAAVACSLMDAYSRCGHVE 500
D S+ + + A + + A+K SG+E +V S++D Y +CG V+
Sbjct: 310 QIDSFALSSIIGVFA--DFALLRQGKQMQALAVKLPSGLE--TSVLNSVVDMYLKCGLVD 365
Query: 501 LSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCN 560
+ + F + + I +T +I GY ++G+GK+ + + + M+ ++PDE+ +L L+ C+
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 561 HTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMW 620
H+GM+KEG LF + HG++P H++C+VDLL RAG P K + +W
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 621 SSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALAR 680
+LL CR H + E+G ++L+ +D +PA ++ SN Y + G ++ RE+ +
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIK 545
Query: 681 KMTREIGHSSIEIRQ 695
+ +E G S +EI +
Sbjct: 546 GLKKEAGMSWVEIER 560
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 220/458 (48%), Gaps = 24/458 (5%)
Query: 79 TKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLG 136
T N ID + K R+ A VF +MP R+ V+++ L+S + +L L+ EMG G
Sbjct: 43 TSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG 102
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
I TFS+ L C +G+Q+H +K GF V VG +LV Y G A
Sbjct: 103 IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 162
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE--PNGVTFCYLLKVCSN 254
++F + +R+L WN ++ GF G ++L+ + M ++ P+ T LLK CS+
Sbjct: 163 KVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS 222
Query: 255 HRRLNEGKKLQSCILKMGF-VESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWN 313
+ GK++ +++ GF S+ + +LVD Y CG L A+K+F+ I + +ISW+
Sbjct: 223 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWS 282
Query: 314 SLVSVNADNDLLCDALELFTVMQLWG---QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
SL+ A +A+ LF +Q S ++ S++G+ + + GKQ+ A
Sbjct: 283 SLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ---GKQMQALA 339
Query: 371 LKL--GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQ 428
+KL G + + ++++DMY KC ++ + F + + + ++T G +
Sbjct: 340 VKLPSGLETSVL---NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGK 396
Query: 429 DVVELFGLMIDEGLMPDEVTFSTTLKALSVSA---SATFTSSQLLHCFALKSGVEGDAAV 485
V +F M+ + PDEV + L A S S S+LL +K VE A V
Sbjct: 397 KSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 456
Query: 486 ACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMIN 522
+D R G ++ + + +T+ PN + ++++
Sbjct: 457 ----VDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 135/291 (46%), Gaps = 23/291 (7%)
Query: 345 RSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFE 404
++LV +L C+R G Q+HC+ LK G + + LIDMY KC + + VF+
Sbjct: 7 QNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLI-TSNYLIDMYCKCREPLMAYKVFD 65
Query: 405 SLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATF 464
S+ +R + ++LM+ G + + LF M +G+ P+E TFST LKA + +
Sbjct: 66 SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA--L 123
Query: 465 TSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGY 524
+H F LK G E V SL+D YS+CG + + ++F + + I + +MI G+
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Query: 525 ARNGMGKQGLAVLHAMVEKGLK--PDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQ 582
G G + L M E +K PDE T L C+ TGM+ G K +HG
Sbjct: 184 VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG-------KQIHGFL 236
Query: 583 PDQRHFSC---------MVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
+ F C +VDL + G Q +K WSSL+
Sbjct: 237 V-RSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEK-TMISWSSLI 285
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 120/249 (48%), Gaps = 4/249 (1%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYG 130
PS T + +D ++K L SA F + + ++++ LI + E +A+ L+
Sbjct: 244 PSSATITGSL-VDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
+ L + S SS++ V A R+G Q+ VK V ++V YL G
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
L + A + F E+ +++ W V++ G+ + G ++S+ + M +EP+ V + +L
Sbjct: 363 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NV 309
CS+ + EG++L S +L+ ++ + +VD G L AK + +P++ NV
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482
Query: 310 ISWNSLVSV 318
W +L+S+
Sbjct: 483 GIWQTLLSL 491
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/615 (29%), Positives = 314/615 (51%), Gaps = 7/615 (1%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLLGIRETS 141
I A+++ ++ +F + +D V +N++++ + C + + + M + I +
Sbjct: 180 IKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNA 239
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
TF VL+VCA GVQ+H VV G + +L+ Y G + A +LF
Sbjct: 240 VTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRM 299
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+ + WN ++ G+ + G +EESL ++ M GV P+ +TF LL S L
Sbjct: 300 MSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYC 359
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
K++ I++ + +IF+ +AL+D Y C + A+ F +V+ + +++S
Sbjct: 360 KQIHCYIMRHS-ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH 418
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
N L D+LE+F + SP+ +LV +L + LG+++H +K GFD +
Sbjct: 419 NGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDN-RCN 477
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
A+IDMY KC + + +FE L+KR + NS++T + +++F M G
Sbjct: 478 IGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG 537
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVEL 501
+ D V+ S L A + S +F + +H F +K + D +L+D Y++CG+++
Sbjct: 538 ICYDCVSISAALSACANLPSESF--GKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKA 595
Query: 502 SLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEK-GLKPDEITFLCALTGCN 560
++ +F+T+ N + + S+I +G K L + H MVEK G++PD+ITFL ++ C
Sbjct: 596 AMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCC 655
Query: 561 HTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMW 620
H G V EG F SM +G+QP Q H++C+VDL RAG P D +W
Sbjct: 656 HVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVW 715
Query: 621 SSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALAR 680
+LL +CR HKN E+ A+ L++LDP + ++ SN +A +++ ++R + R
Sbjct: 716 GTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKER 775
Query: 681 KMTREIGHSSIEIRQ 695
++ + G+S IEI +
Sbjct: 776 EVQKIPGYSWIEINK 790
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 140/561 (24%), Positives = 264/561 (47%), Gaps = 18/561 (3%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVT--YNLLISAWCFPP--EQALHLYGEMG 133
YT R + + + +F+ + LR + +N +IS++ QAL Y +M
Sbjct: 71 YTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKML 130
Query: 134 LLGIRETSTTFSSVLAVC-ARSGFHREGVQVHCRVVK-FGFLSNVFVGGTLVGFYLNVGL 191
G+ +TF ++ C A F +G+ V G N FV +L+ YL G
Sbjct: 131 CFGVSPDVSTFPCLVKACVALKNF--KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 192 REVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKV 251
+V +LFD + +++ +WNV+L G+ + G ++ + +S M D + PN VTF +L V
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 252 CSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS 311
C++ ++ G +L ++ G V+ + N+L+ YS CG A K F + + ++
Sbjct: 249 CASKLLIDLGVQLHGLVVVSG-VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVT 307
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
WN ++S + L+ ++L F M G P + LL S S+ E + KQIHC+ +
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 372 K--LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQD 429
+ + D + SALID Y KC + + +F + ++++ H G D
Sbjct: 368 RHSISLD---IFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYID 424
Query: 430 VVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSL 489
+E+F ++ + P+E+T + L + + + + LH F +K G + + C++
Sbjct: 425 SLEMFRWLVKVKISPNEITLVSILPVIGILLALKL--GRELHGFIIKKGFDNRCNIGCAV 482
Query: 490 MDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDE 549
+D Y++CG + L+ +IFE LS + + + SMI A++ + + M G+ D
Sbjct: 483 IDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDC 542
Query: 550 ITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXX 609
++ AL+ C + G+ + M H + D S ++D+ + G
Sbjct: 543 VSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCG-NLKAAMNVF 600
Query: 610 QTPDKRDCFMWSSLLRSCRSH 630
+T +++ W+S++ +C +H
Sbjct: 601 KTMKEKNIVSWNSIIAACGNH 621
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 233/498 (46%), Gaps = 22/498 (4%)
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
S +L C+ R+G QVH ++ + + ++G Y G ++F L
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 204 ERNLAV--WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
R ++ WN ++ F G + ++L +Y +M GV P+ TF L+K C +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
L + +G ++ N FVA++L+ Y G + K F+ + ++ + WN +++ A
Sbjct: 158 DFLSDTVSSLG-MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD-EGSV 380
L ++ F+VM++ SP+ + +L+ C+ I LG Q+H + G D EGS+
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 381 HAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDE 440
+++L+ MY KC + + +F +++ N +++ G ++ + F MI
Sbjct: 277 --KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 441 GLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE 500
G++PD +TFS+ L SVS + +HC+ ++ + D + +L+DAY +C V
Sbjct: 335 GVLPDAITFSSLLP--SVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVS 392
Query: 501 LSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCN 560
++ IF +S + + FT+MI+GY NG+ L + +V+ + P+EIT + L
Sbjct: 393 MAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIG 452
Query: 561 HTGMVKEGRILFDSMKSVHGVQP----DQR-HFSC-MVDLLCRAGXXXXXXXXXXQTPDK 614
+K GR L HG D R + C ++D+ + G + K
Sbjct: 453 ILLALKLGREL-------HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL-SK 504
Query: 615 RDCFMWSSLLRSCRSHKN 632
RD W+S++ C N
Sbjct: 505 RDIVSWNSMITRCAQSDN 522
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 12/239 (5%)
Query: 345 RSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFE 404
R L LL +CS + GKQ+H L + G + ++ MY C +F
Sbjct: 36 RRLSLLLQACSNPNLLRQGKQVHAF-LIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 405 SLTKR--TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASA 462
L R ++ NS+++S G + + M+ G+ PD TF +KA A
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA--CVALK 152
Query: 463 TFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMIN 522
F L G++ + VA SL+ AY G +++ ++F+ + + + + M+N
Sbjct: 153 NFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLN 212
Query: 523 GYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
GYA+ G + M + P+ +TF C L+ C ++L D +HG+
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVC-------ASKLLIDLGVQLHGL 264
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/621 (27%), Positives = 320/621 (51%), Gaps = 8/621 (1%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLL 135
+ + + + F + ++ A VF + + V Y+ ++ + + +AL + M
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
+ F+ +L VC R G ++H +VK GF ++F L Y A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
R++FD +PER+L WN ++ G+ + G +L MC + ++P+ +T +L S
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSL 315
R ++ GK++ ++ GF +S + ++ ALVD Y+ CG L A++ F+ + NV+SWNS+
Sbjct: 250 RLISVGKEIHGYAMRSGF-DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 316 VSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGF 375
+ N+ +A+ +F M G P+ S++G L++C+ ++ G+ IH +++LG
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 376 DEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFG 435
D +V ++LI MY KC +++++ ++F L RTL N+++ + G D + F
Sbjct: 369 DR-NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 436 LMIDEGLMPDEVTFSTTLKALSVSASATFTS-SQLLHCFALKSGVEGDAAVACSLMDAYS 494
M + PD T+ + + A+ A + T ++ +H ++S ++ + V +L+D Y+
Sbjct: 428 QMRSRTVKPDTFTYVSVITAI---AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYA 484
Query: 495 RCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
+CG + ++ IF+ +S + + +MI+GY +G GK L + M + +KP+ +TFL
Sbjct: 485 KCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLS 544
Query: 555 ALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDK 614
++ C+H+G+V+ G F MK + ++ H+ MVDLL RAG Q P K
Sbjct: 545 VISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK 604
Query: 615 RDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIR 674
++ ++L +C+ HKN +AA+ L EL+PDD + +N Y ++ ++R
Sbjct: 605 PAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVR 664
Query: 675 EVALARKMTREIGHSSIEIRQ 695
L + + + G S +EI+
Sbjct: 665 VSMLRQGLRKTPGCSMVEIKN 685
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 228/461 (49%), Gaps = 14/461 (3%)
Query: 121 PPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGG 180
PP + H E + + +L C+ +E Q+ V K G F
Sbjct: 17 PPSRHRHFLSERNYIPANVYEHPAALLLERCSSL---KELRQILPLVFKNGLYQEHFFQT 73
Query: 181 TLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEP 240
LV + G + A +F+ + + +++ +L+GF ++ ++++L ++ RM +D VEP
Sbjct: 74 KLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEP 133
Query: 241 NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKS 300
F YLLKVC + L GK++ ++K GF ++F L + Y+ C + A+K
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF-SLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 301 FEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
F+ +P +++SWN++V+ + N + ALE+ M PS ++V +L + S I
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
+GK+IH +A++ GFD V+ +AL+DMY KC +E++ +F+ + +R + NS++ +
Sbjct: 253 SVGKEIHGYAMRSGFD-SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 421 LSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
++ + +F M+DEG+ P +V+ L A + + +H +++ G++
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA--CADLGDLERGRFIHKLSVELGLD 369
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAM 540
+ +V SL+ Y +C V+ + +F L S + + +MI G+A+NG L M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 541 VEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
+ +KPD T++ +T + K +HGV
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHA-------KWIHGV 463
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/535 (28%), Positives = 291/535 (54%), Gaps = 7/535 (1%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
Q+H R++ G + F+ L+ + G AR++FD+LP + WN ++RG+
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 222 CVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVA 281
+++L YS M V P+ TF +LLK CS L G+ + + + ++GF ++++FV
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF-DADVFVQ 157
Query: 282 NALVDFYSACGCLVGAKKSFEAIPV--ENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
N L+ Y+ C L A+ FE +P+ ++SW ++VS A N +ALE+F+ M+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
P +LV +LN+ + +++ G+ IH +K+G E +L MY KC + ++
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGL-EIEPDLLISLNTMYAKCGQVATA 276
Query: 400 VAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
+F+ + L N++++ + G ++ +++F MI++ + PD ++ ++ + A +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 460 ASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTS 519
S ++ ++ + +S D ++ +L+D +++CG VE + +F+ + + +++
Sbjct: 337 GS--LEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 520 MINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVH 579
MI GY +G ++ +++ AM G+ P+++TFL L CNH+GMV+EG F+ M H
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-H 453
Query: 580 GVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRA 639
+ P Q+H++C++DLL RAG P + +W +LL +C+ H++ E+G A
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA 513
Query: 640 AQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
AQ L +DP + ++Q SN YA +D E+R + + +++G S +E+R
Sbjct: 514 AQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 187/365 (51%), Gaps = 8/365 (2%)
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
K++ + +L +G S F+ L+ S+ G + A++ F+ +P + WN+++ +
Sbjct: 38 KQIHARLLVLGLQFSG-FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
N+ DAL +++ MQL SP + LL +CS + +G+ +H +LGFD V
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFD-ADVF 155
Query: 382 AQSALIDMYGKCSDIESSVAVFESLT--KRTLECCNSLMTSLSHCGATQDVVELFGLMID 439
Q+ LI +Y KC + S+ VFE L +RT+ +++++ + G + +E+F M
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 440 EGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHV 499
+ PD V + L A + + +H +K G+E + + SL Y++CG V
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQD--LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV 273
Query: 500 ELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGC 559
+ +F+ + SPN I + +MI+GYA+NG ++ + + H M+ K ++PD I+ A++ C
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333
Query: 560 NHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFM 619
G +++ R +++ + + D S ++D+ + G +T D RD +
Sbjct: 334 AQVGSLEQARSMYEYVGR-SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD-RDVVV 391
Query: 620 WSSLL 624
WS+++
Sbjct: 392 WSAMI 396
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 221/500 (44%), Gaps = 51/500 (10%)
Query: 92 DLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLA 149
D+ A VF +P +N +I + + AL +Y M L + S TF +L
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 150 VCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD--ELPERNL 207
C+ + G VH +V + GF ++VFV L+ Y AR +F+ LPER +
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 208 AVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSC 267
W ++ + + G E+L +S+M V+P+ V +L + + L +G+ + +
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 268 ILKMGF-VESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLC 326
++KMG +E ++ + +L Y+ CG + AK F+ + N+I WN+++S A N
Sbjct: 248 VVKMGLEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 327 DALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSAL 386
+A+++F M P S+ +++C++ + + ++ + + + + V SAL
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD-DVFISSAL 364
Query: 387 IDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDE 446
IDM+ KC +E + VF+ R + ++++ G ++ + L+ M G+ P++
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 447 VTFSTTLKALSVS----------------------------------ASATFTSSQLLHC 472
VTF L A + S A + +++ C
Sbjct: 425 VTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 473 FALKSGVEGDAAVACSLMDAYSRCGHVEL----SLQIFETLSSPNAICFTSMINGYARNG 528
++ GV V +L+ A + HVEL + Q+F ++ N + + N YA
Sbjct: 485 MPVQPGV----TVWGALLSACKKHRHVELGEYAAQQLF-SIDPSNTGHYVQLSNLYAAAR 539
Query: 529 MGKQGLAVLHAMVEKGLKPD 548
+ + V M EKGL D
Sbjct: 540 LWDRVAEVRVRMKEKGLNKD 559
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 142/346 (41%), Gaps = 37/346 (10%)
Query: 87 FIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETSTTF 144
+ K + +A +F M + + +N +IS + +A+ ++ EM +R + +
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 145 SSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPE 204
+S ++ CA+ G + ++ V + + +VF+ L+ + G E AR +FD +
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 205 RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKL 264
R++ VW+ ++ G+ G E+++ Y M GV PN VTF LL C++ + EG
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 265 QSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLVSV----- 318
+ + A ++D G L A + + +PV+ V W +L+S
Sbjct: 447 FNRMADHKINPQQQHYA-CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505
Query: 319 ----------------NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
++ L+ +LW + VR R +E GL
Sbjct: 506 HVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR---------VRMKEKGL 556
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTK 408
K + C +++ G + A + + +IE V ES K
Sbjct: 557 NKDVGCSWVEV---RGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 180/628 (28%), Positives = 319/628 (50%), Gaps = 18/628 (2%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQA---LHLYGEMG 133
VY ID ++K +++ A VF +P + TVT+ +IS C ++ L L+ ++
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG-CVKMGRSYVSLQLFYQLM 241
Query: 134 LLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE 193
+ S+VL+ C+ F G Q+H ++++G + + L+ Y+ G
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
A +LF+ +P +N+ W LL G+ + +E++ ++ M G++P+ +L C+
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWN 313
+ L G ++ + +K + ++ +V N+L+D Y+ C CL A+K F+ +V+ +N
Sbjct: 362 SLHALGFGTQVHAYTIKAN-LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFN 420
Query: 314 SLV---SVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
+++ S L +AL +F M+ PS+ + V LL + + +GL KQIH
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Query: 371 LKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
K G + + A SALID+Y C ++ S VF+ + + L NS+ ++
Sbjct: 481 FKYGLNL-DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 431 VELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQL---LHCFALKSGVEGDAAVAC 487
+ LF + PDE TF+ V+A+ S QL HC LK G+E + +
Sbjct: 540 LNLFLELQLSRERPDEFTFANM-----VTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 488 SLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKP 547
+L+D Y++CG E + + F++ +S + +C+ S+I+ YA +G GK+ L +L M+ +G++P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 548 DEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXX 607
+ ITF+ L+ C+H G+V++G F+ M G++P+ H+ CMV LL RAG
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRAGRLNKAREL 713
Query: 608 XXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNF 667
+ P K +W SLL C N E+ AA++ + DP D + SN YA G +
Sbjct: 714 IEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMW 773
Query: 668 DASREIREVALARKMTREIGHSSIEIRQ 695
++++RE + +E G S I I +
Sbjct: 774 TEAKKVRERMKVEGVVKEPGRSWIGINK 801
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 159/584 (27%), Positives = 278/584 (47%), Gaps = 31/584 (5%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLL 135
Y N I+ + ++ + A VF MP R+ V+++ ++SA E++L ++ E
Sbjct: 80 YLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE--FW 137
Query: 136 GIRETSTT---FSSVLAVCARSGFHREG----VQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
R+ S SS + C SG G Q+ +VK GF +V+VG L+ FYL
Sbjct: 138 RTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 189 VGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
G + AR +FD LPE++ W ++ G ++G SL + ++ D V P+G +
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVEN 308
L CS L GK++ + IL+ G +E + + N L+D Y CG ++ A K F +P +N
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYG-LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
Query: 309 VISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHC 368
+ISW +L+S N L +A+ELFT M +G P + + +L SC+ +G G Q+H
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Query: 369 HALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQ 428
+ +K S + ++LIDMY KC + + VF+ + N+++ S G
Sbjct: 375 YTIKANLGNDS-YVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQW 433
Query: 429 DVVELFGLMID---EGLMPDEVTFSTTLKALSVSASATFTS---SQLLHCFALKSGVEGD 482
++ E + D + P +TF + L+ ASA+ TS S+ +H K G+ D
Sbjct: 434 ELHEALNIFRDMRFRLIRPSLLTFVSLLR-----ASASLTSLGLSKQIHGLMFKYGLNLD 488
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVE 542
+L+D YS C ++ S +F+ + + + + SM GY + ++ L + +
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQL 548
Query: 543 KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXX 602
+PDE TF +T + V+ G+ F G++ + + ++D+ + G
Sbjct: 549 SRERPDEFTFANMVTAAGNLASVQLGQ-EFHCQLLKRGLECNPYITNALLDMYAKCG-SP 606
Query: 603 XXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVEL 646
+ RD W+S++ S +H G +A Q+L ++
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGE---GKKALQMLEKM 647
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 211/432 (48%), Gaps = 16/432 (3%)
Query: 132 MGLLGIRETSTTFSSVLAVCARSGF-HREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
+G+ G RE F+ +L + A H + V VH +++ +G + ++ L+ Y G
Sbjct: 39 IGIRGRRE----FARLLQLRASDDLLHYQNV-VHGQIIVWGLELDTYLSNILINLYSRAG 93
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE-PNGVTFCYLL 249
AR++F+++PERNL W+ ++ G EESL + + PN +
Sbjct: 94 GMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153
Query: 250 KVCS--NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
+ CS + R +LQS ++K GF + +++V L+DFY G + A+ F+A+P +
Sbjct: 154 QACSGLDGRGRWMVFQLQSFLVKSGF-DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK 212
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
+ ++W +++S +L+LF + P L +L++CS + GKQIH
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 368 CHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGAT 427
H L+ G E + LID Y KC + ++ +F + + + +L++
Sbjct: 273 AHILRYGL-EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALH 331
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVAC 487
++ +ELF M GL PD S+ L + + + F + +H + +K+ + D+ V
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ--VHAYTIKANLGNDSYVTN 389
Query: 488 SLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMG---KQGLAVLHAMVEKG 544
SL+D Y++C + + ++F+ ++ + + F +MI GY+R G + L + M +
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 545 LKPDEITFLCAL 556
++P +TF+ L
Sbjct: 450 IRPSLLTFVSLL 461
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 173/575 (30%), Positives = 283/575 (49%), Gaps = 7/575 (1%)
Query: 122 PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGT 181
P ++L L+ EM G + TF V CAR VH ++K F S+VFVG
Sbjct: 33 PVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTA 92
Query: 182 LVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPN 241
V ++ + A ++F+ +PER+ WN +L GFC+ G +++ + + M + + P+
Sbjct: 93 TVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPD 152
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
VT L++ S + L + + + +++G V+ + VAN + Y CG L AK F
Sbjct: 153 SVTVMTLIQSASFEKSLKLLEAMHAVGIRLG-VDVQVTVANTWISTYGKCGDLDSAKLVF 211
Query: 302 EAIPV--ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
EAI V+SWNS+ + DA L+ +M P + + + L SC E
Sbjct: 212 EAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPET 271
Query: 360 IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMT 419
+ G+ IH HA+ LG D+ + A + I MY K D S+ +F+ +T RT +++
Sbjct: 272 LTQGRLIHSHAIHLGTDQ-DIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 420 SLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGV 479
+ G + + LF MI G PD VT + + S + + + A G
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGS--LETGKWIDARADIYGC 388
Query: 480 EGDAAVAC-SLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLH 538
+ D + C +L+D YS+CG + + IF+ + +T+MI GYA NG+ + L +
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFS 448
Query: 539 AMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRA 598
M++ KP+ ITFL L C H+G +++G F MK V+ + P H+SCMVDLL R
Sbjct: 449 KMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRK 508
Query: 599 GXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQAS 658
G K D +W +LL +C+ H+N ++ +AA+ L L+P A +++ +
Sbjct: 509 GKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMA 568
Query: 659 NFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
N YA G +D IR + R + + G S I++
Sbjct: 569 NIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQV 603
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 203/418 (48%), Gaps = 9/418 (2%)
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
WN+ +R ESL + M G EPN TF ++ K C+ + + + + ++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
K F S++FV A VD + C + A K FE +P + +WN+++S + A
Sbjct: 80 KSPFW-SDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDM 389
LF M+L +P +++ L+ S S + + L + +H ++LG D V + I
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV-QVTVANTWIST 197
Query: 390 YGKCSDIESSVAVFESLTK--RTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEV 447
YGKC D++S+ VFE++ + RT+ NS+ + S G D L+ LM+ E PD
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLS 257
Query: 448 TFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFE 507
TF A S T T +L+H A+ G + D + + YS+ + +F+
Sbjct: 258 TFINL--AASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 508 TLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKE 567
++S + +T MI+GYA G + LA+ HAM++ G KPD +T L ++GC G ++
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 568 GRILFDSMKSVHGVQPDQRHF-SCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
G+ + D+ ++G + D + ++D+ + G TP+K W++++
Sbjct: 376 GKWI-DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT-VVTWTTMI 431
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 204/452 (45%), Gaps = 7/452 (1%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGL 134
V+ +D F+K ++ A VF MP RD T+N ++S +C ++A L+ EM L
Sbjct: 87 VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRL 146
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
I S T +++ + + +H ++ G V V T + Y G +
Sbjct: 147 NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS 206
Query: 195 ARELFDELP--ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
A+ +F+ + +R + WN + + + G ++ Y M + +P+ TF L C
Sbjct: 207 AKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASC 266
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISW 312
N L +G+ + S + +G + +I N + YS A+ F+ + +SW
Sbjct: 267 QNPETLTQGRLIHSHAIHLG-TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSW 325
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
++S A+ + +AL LF M G+ P + +L+ L++ C + + GK I A
Sbjct: 326 TVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADI 385
Query: 373 LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVE 432
G +V +ALIDMY KC I + +F++ ++T+ +++ + G + ++
Sbjct: 386 YGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALK 445
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDA 492
LF MID P+ +TF L+A + S S + H + ++D
Sbjct: 446 LFSKMIDLDYKPNHITFLAVLQACAHSGSLE-KGWEYFHIMKQVYNISPGLDHYSCMVDL 504
Query: 493 YSRCGHVELSLQIFETLSS-PNAICFTSMING 523
R G +E +L++ +S+ P+A + +++N
Sbjct: 505 LGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 124/268 (46%), Gaps = 5/268 (1%)
Query: 306 VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ 365
+ +V +WN + + + ++L LF M+ G P+ + + +C+R ++G +
Sbjct: 14 LSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM 73
Query: 366 IHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG 425
+H H +K F V +A +DM+ KC+ ++ + VFE + +R N++++ G
Sbjct: 74 VHAHLIKSPF-WSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 132
Query: 426 ATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAV 485
T LF M + PD VT T +++ S S + +H ++ GV+ V
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEA--MHAVGIRLGVDVQVTV 190
Query: 486 ACSLMDAYSRCGHVELSLQIFETLSSPN--AICFTSMINGYARNGMGKQGLAVLHAMVEK 543
A + + Y +CG ++ + +FE + + + + SM Y+ G + M+ +
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250
Query: 544 GLKPDEITFLCALTGCNHTGMVKEGRIL 571
KPD TF+ C + + +GR++
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLI 278
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/621 (28%), Positives = 320/621 (51%), Gaps = 10/621 (1%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE---QALHLYGEMGL 134
Y N I +++ L A VF MP R+ V+YN L SA+ P+ A L M
Sbjct: 133 YANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAF 192
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
++ S+TF+S++ VCA G ++ +++K G+ NV V +++G Y + G E
Sbjct: 193 EYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLES 252
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
AR +FD + R+ WN ++ G + +E+ L ++ M GV+P T+ +L CS
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
+ GK + + I+ + +++ + NAL+D Y +CG + A F I N++SWNS
Sbjct: 313 LGSYSLGKLIHARIIVSDSL-ADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNS 371
Query: 315 LVSVNADNDLLCDALELFT-VMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL 373
++S ++N A+ ++ ++++ P + +++ + E GK +H KL
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKL 431
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVEL 433
G+ E SV + L+ MY K + ES+ VF+ + +R + ++ S G ++ V+
Sbjct: 432 GY-ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQF 490
Query: 434 FGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAY 493
F M E D + S+ + A S A ++ HC A+++G + +V +L+D Y
Sbjct: 491 FIEMYREKNRSDGFSLSSVIGA--CSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMY 548
Query: 494 SRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFL 553
+ G E + IF S+P+ C+ SM+ Y+++GM ++ L+ ++E G PD +T+L
Sbjct: 549 GKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYL 608
Query: 554 CALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPD 613
L C+H G +G+ L++ MK G++ +H+SCMV+L+ +AG Q+P
Sbjct: 609 SLLAACSHRGSTLQGKFLWNQMKE-QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPP 667
Query: 614 KRD-CFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASRE 672
+ +W +LL +C + +N ++G AA+ +++LDP+D A + SN YA G ++ E
Sbjct: 668 GNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAE 727
Query: 673 IREVALARKMTREIGHSSIEI 693
+R +++ G S IE+
Sbjct: 728 MRRKIRGLASSKDPGLSWIEV 748
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 189/405 (46%), Gaps = 13/405 (3%)
Query: 177 FVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVL--LRGFCELGCVEES----LNYY 230
+ L+ Y+ E AR++FD++P+RN+ L + + +G S L +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 231 SRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGF--VESNIFVANALVDFY 288
+ F + + L + C + L +++ + +L G + + N L+ Y
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 289 SACGCLVGAKKSFEAIPVENVISWNSLVSVNADN-DLLCDALELFTVMQLWGQSPSVRSL 347
CG L A+K F+ +P NV+S+N+L S + N D A L T M P+ +
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 348 VGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLT 407
L+ C+ E++ +G ++ +KLG+ + V Q++++ MY C D+ES+ +F+ +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVV-VQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 408 KRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSS 467
R N+++ +D + F M+ G+ P + T+S L S S ++
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS--YSLG 319
Query: 468 QLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARN 527
+L+H + S D + +L+D Y CG + + +F + +PN + + S+I+G + N
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 528 GMGKQGLAVLHAMVEKGL-KPDEITFLCALTGCNHTGMVKEGRIL 571
G G+Q + + ++ +PDE TF A++ G++L
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 7/252 (2%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLI--SAWCFPPEQALHLYGEMGL 134
V+ + + K+R+ SA VF M RD V + +I + E A+ + EM
Sbjct: 437 VFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR 496
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
R + SSV+ C+ R+G HC ++ GF + V G LV Y G E
Sbjct: 497 EKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYET 556
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A +F +L WN +L + + G VE++L+++ ++ +G P+ VT+ LL CS+
Sbjct: 557 AETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSH 616
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS--W 312
+GK L + + + G +++ + +V+ S G + A + E P N + W
Sbjct: 617 RGSTLQGKFLWNQMKEQG-IKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELW 675
Query: 313 NSLVS--VNADN 322
+L+S VN N
Sbjct: 676 RTLLSACVNTRN 687
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/601 (28%), Positives = 304/601 (50%), Gaps = 10/601 (1%)
Query: 96 ALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAVCAR 153
A VF +P D + +++ +C E + + LY + G R FS L C
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTE 154
Query: 154 SGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVL 213
G ++HC++VK NV + G L+ Y G + A ++F+++ RN+ W +
Sbjct: 155 LQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 214 LRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGF 273
+ G+ + EE L ++RM + V N T+ L+ C+ L++GK C++K G
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 274 VESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFT 333
S+ V +L+D Y CG + A++ F +++ W +++ N + +AL LF
Sbjct: 274 ELSSCLVT-SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 334 VMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKC 393
M+ P+ ++ +L+ C E + LG+ +H ++K+G + +V +AL+ MY KC
Sbjct: 333 KMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV--ANALVHMYAKC 390
Query: 394 SDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL 453
+ VFE +++ + NS+++ S G+ + + LF M E + P+ VT ++
Sbjct: 391 YQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLF 450
Query: 454 KALSVSASATFTSSQLLHCFALKSGVEGDAAV--ACSLMDAYSRCGHVELSLQIFETLSS 511
A + S SS LH +++K G ++V +L+D Y++CG + + IF+T+
Sbjct: 451 SACASLGSLAVGSS--LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEE 508
Query: 512 PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRIL 571
N I +++MI GY + G L + M++K KP+E TF L+ C HTGMV EG+
Sbjct: 509 KNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKY 568
Query: 572 FDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHK 631
F SM + P +H++CMVD+L RAG + P + D + + L C H
Sbjct: 569 FSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHS 628
Query: 632 NEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSI 691
++G + +++L PDD + ++ SN YA G ++ ++E+R + R +++ GHS++
Sbjct: 629 RFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
Query: 692 E 692
E
Sbjct: 689 E 689
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 214/464 (46%), Gaps = 8/464 (1%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
Q H + G + ++ + LV Y G + AR +FD++PE + +W V+LR +C
Sbjct: 62 QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNK 121
Query: 222 CVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVA 281
E + Y + G + + F LK C+ + L+ GKK+ ++K+ ++ V
Sbjct: 122 ESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN--VVL 179
Query: 282 NALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQS 341
L+D Y+ CG + A K F I + NV+ W S+++ NDL + L LF M+
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 342 PSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVA 401
+ + L+ +C++ + GK H +K G + S S L+DMY KC DI ++
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS-LLDMYVKCGDISNARR 298
Query: 402 VFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSAS 461
VF + L +++ +H G+ + + LF M + P+ VT ++ L + +
Sbjct: 299 VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIEN 358
Query: 462 ATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMI 521
S +H ++K G+ D VA +L+ Y++C + +FE S + + + S+I
Sbjct: 359 LELGRS--VHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSII 415
Query: 522 NGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
+G+++NG + L + H M + + P+ +T + C G + G L + +
Sbjct: 416 SGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFL 475
Query: 582 QPDQRHF-SCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
H + ++D + G T ++++ WS+++
Sbjct: 476 ASSSVHVGTALLDFYAKCG-DPQSARLIFDTIEEKNTITWSAMI 518
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 180/384 (46%), Gaps = 15/384 (3%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCF--PPEQALHLYGEMGLLGIRETS 141
+D ++K D+++A VF+ D V + +I + +AL L+ +M + I+
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
T +SVL+ C G VH +K G + + V LV Y A+ +F+
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEM 402
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
E+++ WN ++ GF + G + E+L + RM + V PNGVT L C++ L G
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Query: 262 KKLQSCILKMGFV-ESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNA 320
L + +K+GF+ S++ V AL+DFY+ CG A+ F+ I +N I+W++++
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYG 522
Query: 321 DNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK-LGFDEGS 379
+LELF M Q P+ + +L++C + GK+ K F +
Sbjct: 523 KQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPST 582
Query: 380 VHAQSALIDMYGKCSDIESSVAVFESL-TKRTLECCNSLMTSLSHCGATQ--DVVEL-FG 435
H + ++DM + ++E ++ + E + + + C + L CG D+ E+
Sbjct: 583 KH-YTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAF---LHGCGMHSRFDLGEIVIK 638
Query: 436 LMIDEGLMPDEVTFSTTLKALSVS 459
M+D L PD+ ++ + L S
Sbjct: 639 KMLD--LHPDDASYYVLVSNLYAS 660
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 167/616 (27%), Positives = 312/616 (50%), Gaps = 10/616 (1%)
Query: 82 REIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLLGIRE 139
R + F SR + AL +F M D +N++I + C +A+ Y M G++
Sbjct: 69 RALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKA 128
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
+ T+ V+ A EG ++H V+K GF+S+V+V +L+ Y+ +G A ++F
Sbjct: 129 DTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVF 188
Query: 200 DELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLN 259
+E+PER++ WN ++ G+ LG SL + M G +P+ + L CS+
Sbjct: 189 EEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPK 248
Query: 260 EGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVN 319
GK++ ++ ++ V +++D YS G + A++ F + N+++WN ++
Sbjct: 249 MGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCY 308
Query: 320 ADNDLLCDALELFTVM-QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG 378
A N + DA F M + G P V + + LL + + E G+ IH +A++ GF
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPH 364
Query: 379 SVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMI 438
V ++ALIDMYG+C ++S+ +F+ + ++ + NS++ + G +ELF +
Sbjct: 365 MV-LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 439 DEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGH 498
D L+PD T ++ L A + S S + + +H + +KS + + SL+ Y+ CG
Sbjct: 424 DSSLVPDSTTIASILPAYAESLS--LSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 499 VELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTG 558
+E + + F + + + + S+I YA +G G+ + + M+ + P++ TF L
Sbjct: 482 LEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA 541
Query: 559 CNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCF 618
C+ +GMV EG F+SMK +G+ P H+ CM+DL+ R G + P
Sbjct: 542 CSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTAR 601
Query: 619 MWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVAL 678
+W SLL + R+HK+ + AA+ + +++ D+ ++ N YAE G ++ I+ +
Sbjct: 602 IWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661
Query: 679 ARKMTREIGHSSIEIR 694
++ ++R S++E +
Sbjct: 662 SKGISRTSSRSTVEAK 677
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 217/458 (47%), Gaps = 17/458 (3%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGL 134
VY N I ++K A VF MP RD V++N +IS + + +L L+ EM
Sbjct: 165 VYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK 224
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGF-LSNVFVGGTLVGFYLNVGLRE 193
G + + S L C+ + G ++HC V+ +V V +++ Y G
Sbjct: 225 CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVS 284
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC-FDGVEPNGVTFCYLLKVC 252
A +F+ + +RN+ WNV++ + G V ++ + +M +G++P+ +T LL
Sbjct: 285 YAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS 344
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISW 312
+ + EG+ + ++ GF+ ++ + AL+D Y CG L A+ F+ + +NVISW
Sbjct: 345 A----ILEGRTIHGYAMRRGFL-PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISW 399
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQS--PSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
NS+++ N ALELF +LW S P ++ +L + + + + G++IH +
Sbjct: 400 NSIIAAYVQNGKNYSALELF--QELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 371 LKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
+K + ++ S L+ MY C D+E + F + + + NS++ + + G +
Sbjct: 458 VKSRYWSNTIILNS-LVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRIS 516
Query: 431 VELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLM 490
V LF MI + P++ TF++ L A S+S + + G++ ++
Sbjct: 517 VWLFSEMIASRVNPNKSTFASLLAACSISGMVD-EGWEYFESMKREYGIDPGIEHYGCML 575
Query: 491 DAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARN 527
D R G+ + + E + P A + S++N +RN
Sbjct: 576 DLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNA-SRN 612
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 183/633 (28%), Positives = 323/633 (51%), Gaps = 20/633 (3%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPL---RDTVTYNLLISAWCFPPEQ--ALH 127
P +Y N I + KS D A VF TM RD V+++ +++ + + A+
Sbjct: 95 PDSVLY--NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIK 152
Query: 128 LYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFG-FLSNVFVGGTLVGFY 186
++ E LG+ +++V+ C+ S F G ++K G F S+V VG +L+ +
Sbjct: 153 VFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF 212
Query: 187 LN-VGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTF 245
+ E A ++FD++ E N+ W +++ ++G E++ ++ M G E + T
Sbjct: 213 VKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTL 272
Query: 246 CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSAC---GCLVGAKKSFE 302
+ C+ L+ GK+L S ++ G V+ V +LVD Y+ C G + +K F+
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDD---VECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 303 AIPVENVISWNSLVSVNADN-DLLCDALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEI 360
+ +V+SW +L++ N +L +A+ LF+ M G P+ + +C +
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
+GKQ+ A K G S A S +I M+ K +E + FESL+++ L N+ +
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANS-VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 448
Query: 421 LSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
+ +L + + L TF++ L V+ + + +H +K G+
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG--VANVGSIRKGEQIHSQVVKLGLS 506
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAM 540
+ V +L+ YS+CG ++ + ++F + + N I +TSMI G+A++G + L + M
Sbjct: 507 CNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 541 VEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGX 600
+E+G+KP+E+T++ L+ C+H G+V EG F+SM H ++P H++CMVDLLCRAG
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 601 XXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNF 660
P + D +W + L +CR H N E+G AA+ ++ELDP++PA ++Q SN
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNI 686
Query: 661 YAEIGNFDASREIREVALARKMTREIGHSSIEI 693
YA G ++ S E+R R + +E G S IE+
Sbjct: 687 YACAGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 238/509 (46%), Gaps = 17/509 (3%)
Query: 132 MGLLGIRET-STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
M GIR S TFSS+L C R+ R G VH R+++F + + +L+ Y G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 191 LREVARELFDELP---ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCY 247
A ++F+ + +R++ W+ ++ + G +++ + G+ PN +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVD-FYSACGCLVGAKKSFEAIPV 306
+++ CSN + G+ ++K G ES++ V +L+D F A K F+ +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 307 ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQI 366
NV++W +++ +A+ F M L G +L + ++C+ E + LGKQ+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 367 HCHALKLGFDEGSVHAQSALIDMYGKCS---DIESSVAVFESLTKRTLECCNSLMTS-LS 422
H A++ G + + +L+DMY KCS ++ VF+ + ++ +L+T +
Sbjct: 292 HSWAIRSGLVD---DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348
Query: 423 HCGATQDVVELFGLMIDEG-LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEG 481
+C + + LF MI +G + P+ TFS+ KA + S Q+L A K G+
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG-NLSDPRVGKQVLGQ-AFKRGLAS 406
Query: 482 DAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMV 541
+++VA S++ + + +E + + FE+LS N + + + ++G RN +Q +L +
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 542 EKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXX 601
E+ L TF L+G + G +++G + + + G+ +Q + ++ + + G
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL-GLSCNQPVCNALISMYSKCG-S 524
Query: 602 XXXXXXXXQTPDKRDCFMWSSLLRSCRSH 630
+ R+ W+S++ H
Sbjct: 525 IDTASRVFNFMENRNVISWTSMITGFAKH 553
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 204/681 (29%), Positives = 326/681 (47%), Gaps = 113/681 (16%)
Query: 74 SDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMG 133
S V N + + +S + A +F MP R+ ++N +I + E+
Sbjct: 59 SSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKG-------- 110
Query: 134 LLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE 193
TS F ++ R+G + NV V G + G
Sbjct: 111 ------TSLRFFDMMP-------ERDG-----------YSWNVVVSG-----FAKAGELS 141
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
VAR LF+ +PE+++ N LL G+ G EE+L + + F + +T +LK C+
Sbjct: 142 VARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAITLTTVLKACA 198
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI--PVEN--- 308
L GK++ + IL +G VE + + ++LV+ Y+ CG L A E I P ++
Sbjct: 199 ELEALKCGKQIHAQIL-IGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLS 257
Query: 309 --------------------------VISWNSLVSVNADNDLLCDALELFTVMQLWGQSP 342
VI WNS++S N++ +AL LF M+ +
Sbjct: 258 ALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRED 317
Query: 343 SVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKC--------- 393
S R+L ++N+C + GKQ+HCHA K G + V A S L+DMY KC
Sbjct: 318 S-RTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVA-STLLDMYSKCGSPMEACKL 375
Query: 394 -SDIES---------------------SVAVFESLTKRTLECCNSLMTSLSHCGATQDVV 431
S++ES + VFE + ++L NS+ S G T + +
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 432 ELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQL-LHCFALKS--GVEGDAAVACS 488
E F M L DEV+ S+ +SA A+ +S +L FA + G++ D V+ S
Sbjct: 436 EYFHQMHKLDLPTDEVSLSSV-----ISACASISSLELGEQVFARATIVGLDSDQVVSSS 490
Query: 489 LMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPD 548
L+D Y +CG VE ++F+T+ + + + SMI+GYA NG G + + + M G++P
Sbjct: 491 LIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPT 550
Query: 549 EITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXX 608
+ITF+ LT CN+ G+V+EGR LF+SMK HG PD+ HFSCMVDLL RAG
Sbjct: 551 QITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLV 610
Query: 609 XQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFD 668
+ P D MWSS+LR C ++ + +G +AA+ ++EL+P++ ++Q S +A G+++
Sbjct: 611 EEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWE 670
Query: 669 ASREIREVALARKMTREIGHS 689
+S +R++ +T+ G S
Sbjct: 671 SSALVRKLMRENNVTKNPGSS 691
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 209/498 (41%), Gaps = 105/498 (21%)
Query: 162 QVHCRVVKFGFLSN-VFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCEL 220
Q + ++K GFLS+ V V L+ Y G +AR LFDE+P+RN WN ++ G+
Sbjct: 47 QTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNS 106
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
G SL ++ M E +G ++
Sbjct: 107 GEKGTSLRFFDMM----PERDGYSW----------------------------------- 127
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
N +V ++ G L A++ F A+P ++V++ NSL+ N +AL LF +
Sbjct: 128 -NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNF--- 183
Query: 341 SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSV 400
S +L +L +C+ E + GKQIH L +G E S+L+++Y KC D+ +
Sbjct: 184 SADAITLTTVLKACAELEALKCGKQIHAQIL-IGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 401 AVFESLTKRTLECCNSLMTSLSHCGATQDVVELF----------------GLMIDEGLMP 444
+ E + + ++L++ ++CG + LF G + + M
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 445 DEVTF----------STTLKAL--SVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDA 492
V F S TL A+ + + + +HC A K G+ D VA +L+D
Sbjct: 303 ALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDM 362
Query: 493 YSR-------------------------------CGHVELSLQIFETLSSPNAICFTSMI 521
YS+ CG ++ + ++FE + + + I + SM
Sbjct: 363 YSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMT 422
Query: 522 NGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
NG+++NG + L H M + L DE++ ++ C ++ G +F + ++ G+
Sbjct: 423 NGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGL 481
Query: 582 QPDQRHFSCMVDLLCRAG 599
DQ S ++DL C+ G
Sbjct: 482 DSDQVVSSSLIDLYCKCG 499
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 172/371 (46%), Gaps = 41/371 (11%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHL 128
R P D ++ + I + +N + +F R + +N +IS + +AL L
Sbjct: 249 REPDD--HSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVL 306
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL------ 182
+ EM RE S T ++V+ C GF G Q+HC KFG + ++ V TL
Sbjct: 307 FNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSK 365
Query: 183 -------------------------VGFYLNVGLREVARELFDELPERNLAVWNVLLRGF 217
+ Y + G + A+ +F+ + ++L WN + GF
Sbjct: 366 CGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGF 425
Query: 218 CELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESN 277
+ GC E+L Y+ +M + + V+ ++ C++ L G+++ + +G ++S+
Sbjct: 426 SQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVG-LDSD 484
Query: 278 IFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQL 337
V+++L+D Y CG + ++ F+ + + + WNS++S A N +A++LF M +
Sbjct: 485 QVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSV 544
Query: 338 WGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL--GFDEGSVHAQSALIDMYGKCSD 395
G P+ + + +L +C+ + G+++ ++K+ GF H S ++D+ +
Sbjct: 545 AGIRPTQITFMVVLTACNYCGLVEEGRKLF-ESMKVDHGFVPDKEHF-SCMVDLLARAGY 602
Query: 396 IESSVAVFESL 406
+E ++ + E +
Sbjct: 603 VEEAINLVEEM 613
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 179/632 (28%), Positives = 324/632 (51%), Gaps = 16/632 (2%)
Query: 71 RNPSDC-VYTKNREIDAFIKSRDLNSALAVFHTMPLR-DTVTYNLLI-----SAWCFPPE 123
RN D + K ID + K A VF + + + V +N++I S C E
Sbjct: 198 RNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGIC---E 254
Query: 124 QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV 183
+L LY ++ ST+F+ L C++S G Q+HC VVK G ++ +V +L+
Sbjct: 255 SSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLL 314
Query: 184 GFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGV 243
Y G+ A +F + ++ L +WN ++ + E +L+ + M V P+
Sbjct: 315 SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSF 374
Query: 244 TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
T ++ CS N GK + + + K ++S + +AL+ YS CGC A F++
Sbjct: 375 TLSNVISCCSVLGLYNYGKSVHAELFKRP-IQSTSTIESALLTLYSKCGCDPDAYLVFKS 433
Query: 304 IPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQS--PSVRSLVGLLNSCSRAEEIG 361
+ +++++W SL+S N +AL++F M+ S P + + N+C+ E +
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSL 421
G Q+H +K G +V S+LID+Y KC E ++ VF S++ + NS+++
Sbjct: 494 FGLQVHGSMIKTGLVL-NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCY 552
Query: 422 SHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEG 481
S + ++LF LM+ +G+ PD V+ ++ L A +S++A+ + LH + L+ G+
Sbjct: 553 SRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA--ISSTASLLKGKSLHGYTLRLGIPS 610
Query: 482 DAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMV 541
D + +L+D Y +CG + + IF+ + + I + MI GY +G L++ M
Sbjct: 611 DTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMK 670
Query: 542 EKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXX 601
+ G PD++TFL ++ CNH+G V+EG+ +F+ MK +G++P+ H++ MVDLL RAG
Sbjct: 671 KAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLL 730
Query: 602 XXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFY 661
P + D +W LL + R+H N E+G +A+ L+ ++P+ + ++Q N Y
Sbjct: 731 EEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLY 790
Query: 662 AEIGNFDASREIREVALARKMTREIGHSSIEI 693
E G + + ++ + + + ++ G S IE+
Sbjct: 791 MEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEV 822
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/537 (25%), Positives = 263/537 (48%), Gaps = 33/537 (6%)
Query: 84 IDAFIKSRDLNSALAVFHT-------MPLRDTVTYNLLISAWCFPP---EQALHLYGEMG 133
++ ++K L+ A+ VF + RD +N +I + F ++ + + M
Sbjct: 102 VNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY-FKFRRFKEGVGCFRRML 160
Query: 134 LLGIRETSTTFSSVLAV-CARSGFHRE-GVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
+ G+R + + S V++V C F RE G Q+H +++ ++ F+ L+ Y GL
Sbjct: 161 VFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGL 220
Query: 192 REVARELFDELPER-NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
A +F E+ ++ N+ +WNV++ GF G E SL+ Y + V+ +F L
Sbjct: 221 SIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALG 280
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVI 310
CS G+++ ++KMG + ++ +V +L+ YS CG + A+ F + + +
Sbjct: 281 ACSQSENSGFGRQIHCDVVKMG-LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLE 339
Query: 311 SWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
WN++V+ A+ND AL+LF M+ P +L +++ CS GK +H
Sbjct: 340 IWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL 399
Query: 371 LKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
K S +SAL+ +Y KC + VF+S+ ++ + SL++ L G ++
Sbjct: 400 FKRPIQSTST-IESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 431 VELFGLMI--DEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACS 488
+++FG M D+ L PD ++ A + + F +H +K+G+ + V S
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQ--VHGSMIKTGLVLNVFVGSS 516
Query: 489 LMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPD 548
L+D YS+CG E++L++F ++S+ N + + SMI+ Y+RN + + + + + M+ +G+ PD
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPD 576
Query: 549 EITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQ-----PDQRHF-SCMVDLLCRAG 599
++ L + T + +G KS+HG P H + ++D+ + G
Sbjct: 577 SVSITSVLVAISSTASLLKG-------KSLHGYTLRLGIPSDTHLKNALIDMYVKCG 626
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 204/466 (43%), Gaps = 44/466 (9%)
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDGVEP---NGVTFCYLLKVCSNHRRLNEGKKLQSC 267
N +R + G ++L+ YS+ DG P + TF LLK CS L+ GK +
Sbjct: 28 NSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 268 ILKMGFVESNIFVANALVDFYSACGCLVGAKKSFE-------AIPVENVISWNSLVSVNA 320
++ +G+ + F+A +LV+ Y CG L A + F+ + +V WNS++
Sbjct: 86 VVVLGW-RYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF 144
Query: 321 DNDLLCDALELFTVMQLWGQSPSVRSLVGLLN-SCS----RAEEIGLGKQIHCHALKLGF 375
+ + F M ++G P SL +++ C R EE GKQIH L+
Sbjct: 145 KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE---GKQIHGFMLRNSL 201
Query: 376 DEGSVHAQSALIDMYGKCS-DIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF 434
D S ++ALIDMY K I++ E K + N ++ G + ++L+
Sbjct: 202 DTDSF-LKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYS 494
L + + +F+ L A S S ++ F + +HC +K G+ D V SL+ YS
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGF--GRQIHCDVVKMGLHNDPYVCTSLLSMYS 318
Query: 495 RCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
+CG V + +F + + +M+ YA N G L + M +K + PD T
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 555 ALTGCNHTGMVKEGRILFDSMKSVHG------VQPDQRHFSCMVDLLCRAGXXXXXXXXX 608
++ C+ G+ G KSVH +Q S ++ L + G
Sbjct: 379 VISCCSVLGLYNYG-------KSVHAELFKRPIQSTSTIESALLTLYSKCG-CDPDAYLV 430
Query: 609 XQTPDKRDCFMWSSLLRS-CRSHKNEEVGTRAAQVLVELDPDDPAV 653
++ +++D W SL+ C++ K +E A +V ++ DD ++
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKE----ALKVFGDMKDDDDSL 472
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 119/274 (43%), Gaps = 16/274 (5%)
Query: 311 SWNSLVSVNADNDLLCDALELFTVMQLW----GQSP---SVRSLVGLLNSCSRAEEIGLG 363
S+ S S+N+ L E + L+ G SP SV + LL +CS + G
Sbjct: 20 SYISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYG 79
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFE-------SLTKRTLECCNS 416
K IH + LG+ A S L++MY KC ++ +V VF+ ++ R + NS
Sbjct: 80 KTIHGSVVVLGWRYDPFIATS-LVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNS 138
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
++ ++ V F M+ G+ PD + S + + + + +H F L+
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIF-ETLSSPNAICFTSMINGYARNGMGKQGLA 535
+ ++ D+ + +L+D Y + G + ++F E N + + MI G+ +G+ + L
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 536 VLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGR 569
+ +K +F AL C+ + GR
Sbjct: 259 LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGR 292
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 186/629 (29%), Positives = 311/629 (49%), Gaps = 19/629 (3%)
Query: 63 RAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP 122
+ QT T VY K ++ ++K + SA +F MP RDTV +N LI +
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 123 EQ--ALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGG 180
+ A L+ M G ++TT ++L C + GF +G VH K G + V
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 181 TLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEP 240
L+ FY A LF E+ +++ WN ++ + + G EE++ + M VE
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 241 NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKS 300
+ VT LL +H + L ++K G V ++I V +LV YS CGCLV A++
Sbjct: 251 SPVTIINLLSAHVSH------EPLHCLVVKCGMV-NDISVVTSLVCAYSRCGCLVSAERL 303
Query: 301 FEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
+ + ++++ S+VS A+ + A+ F+ + +LVG+L+ C ++ I
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
+G +H +A+K G ++ + LI MY K D+E+ + +FE L + L NS+++
Sbjct: 364 DIGMSLHGYAIKSGLCTKTL-VVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG 422
Query: 421 LSHCGATQDVVELF-GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGV 479
G E+F +M+ GL+PD +T ++ L S + LH + L++
Sbjct: 423 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAG--CSQLCCLNLGKELHGYTLRNNF 480
Query: 480 EGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHA 539
E + V +L+D Y++CG+ + +F+++ +P + SMI+GY+ +G+ + L+
Sbjct: 481 ENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLE 540
Query: 540 MVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
M EKGLKPDEITFL L+ CNH G V EG+I F +M G+ P +H++ MV LL RA
Sbjct: 541 MREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRAC 600
Query: 600 XXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASN 659
+ K D +W +LL +C H+ EVG A+ + LD + +++ SN
Sbjct: 601 LFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSN 660
Query: 660 FYAEIGNFDASREIREVALARKMTREIGH 688
YA +D +V R M ++ G+
Sbjct: 661 LYATEAMWD------DVVRVRNMMKDNGY 683
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 207/470 (44%), Gaps = 33/470 (7%)
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
++ T+T+F+S F + QV + K G V+V +L+ YL G A+
Sbjct: 55 LQATTTSFNS---------FKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQ 105
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
LFDE+PER+ VWN L+ G+ G ++ + M G P+ T LL C
Sbjct: 106 MLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCG 165
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV 316
+++G+ + K G +E + V NAL+ FYS C L A+ F + ++ +SWN+++
Sbjct: 166 FVSQGRSVHGVAAKSG-LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMI 224
Query: 317 SVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD 376
+ + L +A+ +F M S +++ LL++ E +HC +K G
Sbjct: 225 GAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEP------LHCLVVKCGM- 277
Query: 377 EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGL 436
+ ++L+ Y +C + S+ ++ S + ++ S+++ + G V F
Sbjct: 278 VNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSK 337
Query: 437 MIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRC 496
+ D V L S+ S LH +A+KSG+ V L+ YS+
Sbjct: 338 TRQLCMKIDAVALVGILHGCKKSSHIDIGMS--LHGYAIKSGLCTKTLVVNGLITMYSKF 395
Query: 497 GHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHA-MVEKGLKPDEITFLCA 555
VE L +FE L I + S+I+G ++G V H M+ GL PD IT
Sbjct: 396 DDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASL 455
Query: 556 LTGCNHTGMVKEGRILFDSMKSVHGVQP----DQRHFSC--MVDLLCRAG 599
L GC+ + G K +HG + +F C ++D+ + G
Sbjct: 456 LAGCSQLCCLNLG-------KELHGYTLRNNFENENFVCTALIDMYAKCG 498
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Query: 409 RTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQ 468
R L +SL+ S H + + +F ++ L P+ T S L+A + S ++ +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 469 LLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNG 528
+ KSG++ V SL++ Y + G V + +F+ + + + + ++I GY+RNG
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 529 MGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
+ M+++G P T + L C G V +GR SVHGV
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGR-------SVHGV 176
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/609 (28%), Positives = 306/609 (50%), Gaps = 8/609 (1%)
Query: 89 KSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSS 146
++ +L+ A VF MP+RD V ++ L+S+ E +AL ++ M G+ + T S
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMIS 207
Query: 147 VLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERN 206
V+ CA G R VH ++ + F + + +L+ Y G + +F+++ ++N
Sbjct: 208 VVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 207 LAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQS 266
W ++ + E++L +S M G+EPN VT +L C + EGK +
Sbjct: 268 AVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHG 327
Query: 267 CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLC 326
++ + ++ ALV+ Y+ CG L + + N+++WNSL+S+ A ++
Sbjct: 328 FAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVI 387
Query: 327 DALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSAL 386
AL LF M P +L +++C A + LGKQIH H ++ D Q++L
Sbjct: 388 QALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT--DVSDEFVQNSL 445
Query: 387 IDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDE 446
IDMY K ++S+ VF + R++ NS++ S G + + + LF M L +E
Sbjct: 446 IDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNE 505
Query: 447 VTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIF 506
VTF ++A S+ + + +H + SG++ D +L+D Y++CG + + +F
Sbjct: 506 VTFLAVIQA--CSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVF 562
Query: 507 ETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVK 566
+SS + + ++SMIN Y +G ++ + MVE G KP+E+ F+ L+ C H+G V+
Sbjct: 563 RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 622
Query: 567 EGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRS 626
EG+ F+ MKS GV P+ HF+C +DLL R+G + P D +W SL+
Sbjct: 623 EGKYYFNLMKSF-GVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Query: 627 CRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREI 686
CR H+ ++ L ++ DD + SN YAE G ++ R +R + + +
Sbjct: 682 CRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVP 741
Query: 687 GHSSIEIRQ 695
G+S+IEI Q
Sbjct: 742 GYSAIEIDQ 750
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 256/530 (48%), Gaps = 10/530 (1%)
Query: 44 TKLWPLMQQRHQSLSFSFIRAQTTTTPRNPSDCV-YTKNREIDAFIKSRDLNSALAVFHT 102
T+ PL + S + A T R D + TK E AF+ S D S+ VF
Sbjct: 2 TQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPD--SSRLVFEA 59
Query: 103 MPLRDTVTYNLLI--SAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHRE- 159
P D+ Y +LI + WC + A+ LY + + + F SVL CA S H
Sbjct: 60 FPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSV 119
Query: 160 GVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCE 219
G +VH R++K G + + +L+ Y G A ++FD +P R+L W+ L+ E
Sbjct: 120 GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
G V ++L + M DGVEP+ VT +++ C+ L + + I + F + +
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMF-DLDET 238
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
+ N+L+ YS CG L+ +++ FE I +N +SW +++S + AL F+ M G
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
P++ +L +L+SC I GK +H A++ D AL+++Y +C +
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC 358
Query: 400 VAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
V ++ R + NSL++ +H G + LF M+ + + PD T ++++ A +
Sbjct: 359 ETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENA 418
Query: 460 ASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTS 519
+ +H +++ V D V SL+D YS+ G V+ + +F + + + + S
Sbjct: 419 GLVPL--GKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNS 475
Query: 520 MINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGR 569
M+ G+++NG + +++ M L+ +E+TFL + C+ G +++G+
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGK 525
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 180/619 (29%), Positives = 312/619 (50%), Gaps = 39/619 (6%)
Query: 111 YNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVV 168
YN LI + +A+ L+ M GI TF L+ CA+S G+Q+H +V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 169 KFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLN 228
K G+ ++FV +LV FY G + AR++FDE+ ERN+ W ++ G+ +++++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 229 YYSRMCFDG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDF 287
+ RM D V PN VT ++ C+ L G+K+ + I G +E N + +ALVD
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG-IEVNDLMVSALVDM 280
Query: 288 YSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSL 347
Y C + AK+ F+ N+ N++ S L +AL +F +M G P S+
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 348 VGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKC-------------- 393
+ ++SCS+ I GK H + L+ GF E + +ALIDMY KC
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGF-ESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 394 -----------------SDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF-G 435
+++++ FE++ ++ + N++++ L ++ +E+F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 436 LMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSR 495
+ EG+ D VT + A + ++ ++ + K+G++ D + +L+D +SR
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDL--AKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 496 CGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCA 555
CG E ++ IF +L++ + +T+ I A G ++ + + M+E+GLKPD + F+ A
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 556 LTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKR 615
LT C+H G+V++G+ +F SM +HGV P+ H+ CMVDLL RAG P +
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 616 DCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIRE 675
+ +W+SLL +CR N E+ AA+ + L P+ ++ SN YA G ++ ++R
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697
Query: 676 VALARKMTREIGHSSIEIR 694
+ + + G SSI+IR
Sbjct: 698 SMKEKGLRKPPGTSSIQIR 716
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP---------PEQALHLYGEMGL 134
+D F + D SA+++F+++ RD +SAW E+A+ L+ +M
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRD-------VSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVG-GTLVGFYLNVGLRE 193
G++ F L C+ G ++G ++ ++K +S V G +V GL E
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 194 VARELFDELP-ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
A +L +++P E N +WN LL G VE + ++ E G ++ L V
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG-SYVLLSNVY 683
Query: 253 SNHRRLNEGKKLQSCILKMGF 273
++ R N+ K++ + + G
Sbjct: 684 ASAGRWNDMAKVRLSMKEKGL 704
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 180/619 (29%), Positives = 312/619 (50%), Gaps = 39/619 (6%)
Query: 111 YNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVV 168
YN LI + +A+ L+ M GI TF L+ CA+S G+Q+H +V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 169 KFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLN 228
K G+ ++FV +LV FY G + AR++FDE+ ERN+ W ++ G+ +++++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 229 YYSRMCFDG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDF 287
+ RM D V PN VT ++ C+ L G+K+ + I G +E N + +ALVD
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG-IEVNDLMVSALVDM 280
Query: 288 YSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSL 347
Y C + AK+ F+ N+ N++ S L +AL +F +M G P S+
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 348 VGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKC-------------- 393
+ ++SCS+ I GK H + L+ GF E + +ALIDMY KC
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGF-ESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 394 -----------------SDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF-G 435
+++++ FE++ ++ + N++++ L ++ +E+F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 436 LMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSR 495
+ EG+ D VT + A + ++ ++ + K+G++ D + +L+D +SR
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDL--AKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 496 CGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCA 555
CG E ++ IF +L++ + +T+ I A G ++ + + M+E+GLKPD + F+ A
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 556 LTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKR 615
LT C+H G+V++G+ +F SM +HGV P+ H+ CMVDLL RAG P +
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 616 DCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIRE 675
+ +W+SLL +CR N E+ AA+ + L P+ ++ SN YA G ++ ++R
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697
Query: 676 VALARKMTREIGHSSIEIR 694
+ + + G SSI+IR
Sbjct: 698 SMKEKGLRKPPGTSSIQIR 716
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP---------PEQALHLYGEMGL 134
+D F + D SA+++F+++ RD +SAW E+A+ L+ +M
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRD-------VSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVG-GTLVGFYLNVGLRE 193
G++ F L C+ G ++G ++ ++K +S V G +V GL E
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLE 624
Query: 194 VARELFDELP-ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
A +L +++P E N +WN LL G VE + ++ E G ++ L V
Sbjct: 625 EAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG-SYVLLSNVY 683
Query: 253 SNHRRLNEGKKLQSCILKMGF 273
++ R N+ K++ + + G
Sbjct: 684 ASAGRWNDMAKVRLSMKEKGL 704
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 303/617 (49%), Gaps = 14/617 (2%)
Query: 87 FIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTF 144
+ K R+L A +F MP R+ +++N LIS + EQA+ L+ E ++ T+
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 145 SSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPE 204
+ L C G +H VV G VF+ L+ Y G + A LFD E
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 205 RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS---NHRRLNEG 261
R+ WN L+ G+ +G EE LN ++M DG+ +LK C N + +G
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
+ K+G +E +I V AL+D Y+ G L A K F +P +NV+++N+++S
Sbjct: 272 MAIHCYTAKLG-MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 322 NDLLCD-----ALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD 376
D + D A +LF MQ G PS + +L +CS A+ + G+QIH K F
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF- 389
Query: 377 EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGL 436
+ SALI++Y E + F S +K+ + S++ + +LF
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 437 MIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRC 496
+ + P+E T S + A + A +S + + +A+KSG++ +V S + Y++
Sbjct: 450 LFSSHIRPEEYTVSLMMSA--CADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKS 507
Query: 497 GHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL 556
G++ L+ Q+F + +P+ +++MI+ A++G + L + +M G+KP++ FL L
Sbjct: 508 GNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVL 567
Query: 557 TGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRD 616
C H G+V +G F MK+ + + P+++HF+C+VDLL R G + +
Sbjct: 568 IACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDH 627
Query: 617 CFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREV 676
W +LL SCR +K+ +G R A+ L+EL+P+ ++ N Y + G ++ E+RE+
Sbjct: 628 PVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVREL 687
Query: 677 ALARKMTREIGHSSIEI 693
R + +E S I I
Sbjct: 688 MRDRGVKKEPALSWIVI 704
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 457 SVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAIC 516
+ + S + +L H +KS + + +L++ Y +C + + Q+F+ + N I
Sbjct: 56 TAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIIS 115
Query: 517 FTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMK 576
F S+I+GY + G +Q + + E LK D+ T+ AL C + G +L +
Sbjct: 116 FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELL-HGLV 174
Query: 577 SVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
V+G+ + ++D+ + G + D+RD W+SL+
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC-DERDQVSWNSLI 221
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 175/628 (27%), Positives = 318/628 (50%), Gaps = 11/628 (1%)
Query: 74 SDCVYT---KNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHL 128
S+C Y N + + K L A VF MP R+ V+Y +I+ + + +A+ L
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
Y +M + F S++ CA S G Q+H +V+K S++ L+ Y+
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR 215
Query: 189 VGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGV-EPNGVTFCY 247
A +F +P ++L W+ ++ GF +LG E+L++ M GV PN F
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
LK CS+ R + G ++ +K N +L D Y+ CG L A++ F+ I
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELA-GNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
+ SWN +++ A+N +A+ +F+ M+ G P SL LL + ++ + G QIH
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 368 CHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC-NSLMTSLSHCGA 426
+ +K GF + ++L+ MY CSD+ +FE N+++T+
Sbjct: 395 SYIIKWGF-LADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQ 453
Query: 427 TQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVA 486
+++ LF LM+ PD +T L+ V S+ SQ+ HC++LK+G+ + +
Sbjct: 454 PVEMLRLFKLMLVSECEPDHITMGNLLRG-CVEISSLKLGSQV-HCYSLKTGLAPEQFIK 511
Query: 487 CSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLK 546
L+D Y++CG + + +IF+++ + + + ++++I GYA++G G++ L + M G++
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
Query: 547 PDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXX 606
P+ +TF+ LT C+H G+V+EG L+ +M++ HG+ P + H SC+VDLL RAG
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAER 631
Query: 607 XXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGN 666
+ + D +W +LL +C++ N + +AA+ ++++DP + + + +A GN
Sbjct: 632 FIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGN 691
Query: 667 FDASREIREVALARKMTREIGHSSIEIR 694
++ + +R + + G S IEI
Sbjct: 692 WENAALLRSSMKKHDVKKIPGQSWIEIE 719
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 225/485 (46%), Gaps = 10/485 (2%)
Query: 143 TFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL 202
T+ S++ C+ S +G ++H ++ + + ++ Y G ARE+FD +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 203 PERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGK 262
PERNL + ++ G+ + G E++ Y +M + + P+ F ++K C++ + GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 263 KLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADN 322
+L + ++K+ S++ NAL+ Y + A + F IP++++ISW+S+++ +
Sbjct: 189 QLHAQVIKLE-SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 323 DLLCDALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
+AL M +G P+ L +CS G QIH +K G+
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL-AGNAI 306
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
A +L DMY +C + S+ VF+ + + N ++ L++ G + V +F M G
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVEL 501
+PD ++ + L A + + +H + +K G D V SL+ Y+ C +
Sbjct: 367 FIPDAISLRSLLCA--QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYC 424
Query: 502 SLQIFETL-SSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCN 560
+FE ++ +++ + +++ ++ + L + M+ +PD IT L GC
Sbjct: 425 CFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCV 484
Query: 561 HTGMVKEG-RILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFM 619
+K G ++ S+K+ G+ P+Q + ++D+ + G + D RD
Sbjct: 485 EISSLKLGSQVHCYSLKT--GLAPEQFIKNGLIDMYAKCG-SLGQARRIFDSMDNRDVVS 541
Query: 620 WSSLL 624
WS+L+
Sbjct: 542 WSTLI 546
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 113/236 (47%), Gaps = 5/236 (2%)
Query: 327 DALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSA 385
+ALE F Q +R+ + L+ +CS + + G++IH H L ++ +
Sbjct: 49 EALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI-LNNH 107
Query: 386 LIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPD 445
++ MYGKC + + VF+ + +R L S++T S G + + L+ M+ E L+PD
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 446 EVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQI 505
+ F + +KA + S+ + LH +K +L+ Y R + + ++
Sbjct: 168 QFAFGSIIKACASSSDVGL--GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRV 225
Query: 506 FETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGL-KPDEITFLCALTGCN 560
F + + I ++S+I G+++ G + L+ L M+ G+ P+E F +L C+
Sbjct: 226 FYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/607 (28%), Positives = 307/607 (50%), Gaps = 16/607 (2%)
Query: 92 DLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLA 149
+++ A +F M RDT+++N + +A+ E++ ++ M STT S++L+
Sbjct: 210 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269
Query: 150 VCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAV 209
V + G +H VVK GF S V V TL+ Y G A +F ++P ++L
Sbjct: 270 VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS 329
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
WN L+ F G ++L M G N VTF L C +G+ L ++
Sbjct: 330 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 389
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
G + I + NALV Y G + +++ +P +V++WN+L+ A+++ AL
Sbjct: 390 VSGLFYNQI-IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 448
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCS-RAEEIGLGKQIHCHALKLGFDEGSVHAQSALID 388
F M++ G S + ++V +L++C + + GK +H + + GF E H +++LI
Sbjct: 449 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF-ESDEHVKNSLIT 507
Query: 389 MYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVT 448
MY KC D+ SS +F L R + N+++ + +H G ++V++L M G+ D+ +
Sbjct: 508 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 567
Query: 449 FSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFET 508
FS L A + A Q LH A+K G E D+ + + D YS+CG + +++
Sbjct: 568 FSEGLSA--AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP 625
Query: 509 LSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
+ + + +I+ R+G ++ A H M+E G+KP +TF+ LT C+H G+V +G
Sbjct: 626 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 685
Query: 569 RILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCR 628
+D + G++P H C++DLL R+G + P K + +W SLL SC+
Sbjct: 686 LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCK 745
Query: 629 SHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGH 688
H N + G +AA+ L +L+P+D +V++ +SN +A G ++ +R +++G
Sbjct: 746 IHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVR---------KQMGF 796
Query: 689 SSIEIRQ 695
+I+ +Q
Sbjct: 797 KNIKKKQ 803
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 142/553 (25%), Positives = 272/553 (49%), Gaps = 12/553 (2%)
Query: 87 FIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTF 144
+ K + A +F MP+R+ V++N ++S + + + +M LGI+ +S
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 145 SSVLAVCARSG-FHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
+S++ C RSG REGVQVH V K G LS+V+V ++ Y GL +R++F+E+P
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKK 263
+RN+ W L+ G+ + G EE ++ Y M +GV N + ++ C + + G++
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 264 LQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADND 323
+ ++K G +ES + V N+L+ + G + A F+ + + ISWNS+ + A N
Sbjct: 182 IIGQVVKSG-LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 324 LLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ 383
+ ++ +F++M+ + + ++ LL+ + G+ IH +K+GFD V
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS-VVCVC 299
Query: 384 SALIDMY-GKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGL 442
+ L+ MY G +E+++ VF+ + + L NSLM S + G + D + L MI G
Sbjct: 300 NTLLRMYAGAGRSVEANL-VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 443 MPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELS 502
+ VTF++ L A F ++LH + SG+ + + +L+ Y + G + S
Sbjct: 359 SVNYVTFTSALAA--CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 416
Query: 503 LQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHT 562
++ + + + + ++I GYA + + LA M +G+ + IT + L+ C
Sbjct: 417 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 476
Query: 563 G-MVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWS 621
G +++ G+ L + S G + D+ + ++ + + G D R+ W+
Sbjct: 477 GDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCG-DLSSSQDLFNGLDNRNIITWN 534
Query: 622 SLLRSCRSHKNEE 634
++L + H + E
Sbjct: 535 AMLAANAHHGHGE 547
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 124/280 (44%), Gaps = 4/280 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGLLGIR 138
N + + K +++ + V MP RD V +N LI + P++AL + M + G+
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 139 ETSTTFSSVLAVCARSG-FHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
T SVL+ C G G +H +V GF S+ V +L+ Y G +++
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
LF+ L RN+ WN +L G EE L S+M GV + +F L +
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
L EG++L +K+GF E + F+ NA D YS CG + K ++ SWN L+S
Sbjct: 581 LEEGQQLHGLAVKLGF-EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILIS 639
Query: 318 VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRA 357
+ + F M G P + V LL +CS
Sbjct: 640 ALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 679
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 9/246 (3%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCF--PPEQALHLYGEMGLL 135
+ KN I + K DL+S+ +F+ + R+ +T+N +++A E+ L L +M
Sbjct: 500 HVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSF 559
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
G+ +FS L+ A+ EG Q+H VK GF + F+ Y G E+
Sbjct: 560 GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG--EIG 617
Query: 196 RELFDELP---ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
E+ LP R+L WN+L+ G EE + M G++P VTF LL C
Sbjct: 618 -EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 676
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVIS 311
S+ +++G I + +E I ++D G L A+ +P++ N +
Sbjct: 677 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 736
Query: 312 WNSLVS 317
W SL++
Sbjct: 737 WRSLLA 742
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 175/631 (27%), Positives = 314/631 (49%), Gaps = 13/631 (2%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW-----CFPPEQALH 127
S C+ N ++ + K L A ++F+ + +D V++N LI+ + +
Sbjct: 45 ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQ 104
Query: 128 LYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL 187
L+ EM I + T + + + G Q H VVK +++V +LVG Y
Sbjct: 105 LFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYC 164
Query: 188 NVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESL---NYYSRMCFDGVEPNGVT 244
GL E ++F +PERN W+ ++ G+ G VEE++ N + R +G + + V
Sbjct: 165 KAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV- 223
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
F +L + + G+++ +K G + + ++NALV YS C L A K F++
Sbjct: 224 FTAVLSSLAATIYVGLGRQIHCITIKNGLL-GFVALSNALVTMYSKCESLNEACKMFDSS 282
Query: 305 PVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGK 364
N I+W+++V+ + N +A++LF+ M G PS ++VG+LN+CS + GK
Sbjct: 283 GDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGK 342
Query: 365 QIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHC 424
Q+H LKLGF E + A +AL+DMY K + + F+ L +R + SL++
Sbjct: 343 QLHSFLLKLGF-ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQN 401
Query: 425 GATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAA 484
++ + L+ M G++P++ T ++ LKA S+ AT + +H +K G +
Sbjct: 402 SDNEEALILYRRMKTAGIIPNDPTMASVLKA--CSSLATLELGKQVHGHTIKHGFGLEVP 459
Query: 485 VACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKG 544
+ +L YS+CG +E +F + + + + +MI+G + NG G + L + M+ +G
Sbjct: 460 IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG 519
Query: 545 LKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXX 604
++PD++TF+ ++ C+H G V+ G F+ M G+ P H++CMVDLL RAG
Sbjct: 520 MEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA 579
Query: 605 XXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEI 664
+W LL +C++H E+G A + L+ L + + ++Q S Y +
Sbjct: 580 KEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTAL 639
Query: 665 GNFDASREIREVALARKMTREIGHSSIEIRQ 695
G + + A +++E+G S IE++
Sbjct: 640 GRMRDVERVWKHMRANGVSKEVGCSWIELKN 670
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 228/501 (45%), Gaps = 19/501 (3%)
Query: 160 GVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCE 219
G VH ++++ G + + LV FY G A +F+ + +++ WN L+ G+ +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 220 LGCVEES---LNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVES 276
G + S + + M + PN T + K S+ + G++ + ++KM
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSF-G 151
Query: 277 NIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ 336
+I+V +LV Y G + K F +P N +W+++VS A + +A+++F +
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 337 LWGQSPSVRSLV--GLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
+ S V +L+S + +GLG+QIHC +K G G V +AL+ MY KC
Sbjct: 212 REKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL-LGFVALSNALVTMYSKCE 270
Query: 395 DIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
+ + +F+S R ++++T S G + + V+LF M G+ P E T L
Sbjct: 271 SLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLN 330
Query: 455 ALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNA 514
A S + LH F LK G E +L+D Y++ G + + + F+ L +
Sbjct: 331 A--CSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388
Query: 515 ICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDS 574
+TS+I+GY +N ++ L + M G+ P++ T L C+ ++ G+ +
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 448
Query: 575 MKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEE 634
HG + S + + + G +TP+K D W++++ S SH +
Sbjct: 449 TIK-HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK-DVVSWNAMI-SGLSHNGQ- 504
Query: 635 VGTRAAQVLVE-----LDPDD 650
G A ++ E ++PDD
Sbjct: 505 -GDEALELFEEMLAEGMEPDD 524
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 173/607 (28%), Positives = 307/607 (50%), Gaps = 16/607 (2%)
Query: 92 DLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLA 149
+++ A +F M RDT+++N + +A+ E++ ++ M STT S++L+
Sbjct: 193 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 252
Query: 150 VCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAV 209
V + G +H VVK GF S V V TL+ Y G A +F ++P ++L
Sbjct: 253 VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS 312
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
WN L+ F G ++L M G N VTF L C +G+ L ++
Sbjct: 313 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 372
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
G + I + NALV Y G + +++ +P +V++WN+L+ A+++ AL
Sbjct: 373 VSGLFYNQI-IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 431
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCS-RAEEIGLGKQIHCHALKLGFDEGSVHAQSALID 388
F M++ G S + ++V +L++C + + GK +H + + GF E H +++LI
Sbjct: 432 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF-ESDEHVKNSLIT 490
Query: 389 MYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVT 448
MY KC D+ SS +F L R + N+++ + +H G ++V++L M G+ D+ +
Sbjct: 491 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 550
Query: 449 FSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFET 508
FS L A + A Q LH A+K G E D+ + + D YS+CG + +++
Sbjct: 551 FSEGLSA--AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP 608
Query: 509 LSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
+ + + +I+ R+G ++ A H M+E G+KP +TF+ LT C+H G+V +G
Sbjct: 609 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 668
Query: 569 RILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCR 628
+D + G++P H C++DLL R+G + P K + +W SLL SC+
Sbjct: 669 LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCK 728
Query: 629 SHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGH 688
H N + G +AA+ L +L+P+D +V++ +SN +A G ++ +R +++G
Sbjct: 729 IHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVR---------KQMGF 779
Query: 689 SSIEIRQ 695
+I+ +Q
Sbjct: 780 KNIKKKQ 786
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 139/537 (25%), Positives = 266/537 (49%), Gaps = 12/537 (2%)
Query: 103 MPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAVCARSG-FHRE 159
MP+R+ V++N ++S + + + +M LGI+ +S +S++ C RSG RE
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 160 GVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCE 219
GVQVH V K G LS+V+V ++ Y GL +R++F+E+P+RN+ W L+ G+ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
G EE ++ Y M +GV N + ++ C + + G+++ ++K G +ES +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG-LESKLA 179
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
V N+L+ + G + A F+ + + ISWNS+ + A N + ++ +F++M+ +
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMY-GKCSDIES 398
+ ++ LL+ + G+ IH +K+GFD V + L+ MY G +E+
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS-VVCVCNTLLRMYAGAGRSVEA 298
Query: 399 SVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSV 458
++ VF+ + + L NSLM S + G + D + L MI G + VTF++ L A
Sbjct: 299 NL-VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA--C 355
Query: 459 SASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFT 518
F ++LH + SG+ + + +L+ Y + G + S ++ + + + +
Sbjct: 356 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 415
Query: 519 SMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG-MVKEGRILFDSMKS 577
++I GYA + + LA M +G+ + IT + L+ C G +++ G+ L + S
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475
Query: 578 VHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEE 634
G + D+ + ++ + + G D R+ W+++L + H + E
Sbjct: 476 A-GFESDEHVKNSLITMYAKCG-DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGE 530
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 124/280 (44%), Gaps = 4/280 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGLLGIR 138
N + + K +++ + V MP RD V +N LI + P++AL + M + G+
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443
Query: 139 ETSTTFSSVLAVCARSG-FHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
T SVL+ C G G +H +V GF S+ V +L+ Y G +++
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
LF+ L RN+ WN +L G EE L S+M GV + +F L +
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
L EG++L +K+GF E + F+ NA D YS CG + K ++ SWN L+S
Sbjct: 564 LEEGQQLHGLAVKLGF-EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILIS 622
Query: 318 VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRA 357
+ + F M G P + V LL +CS
Sbjct: 623 ALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHG 662
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 9/246 (3%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCF--PPEQALHLYGEMGLL 135
+ KN I + K DL+S+ +F+ + R+ +T+N +++A E+ L L +M
Sbjct: 483 HVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSF 542
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
G+ +FS L+ A+ EG Q+H VK GF + F+ Y G E+
Sbjct: 543 GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG--EIG 600
Query: 196 RELFDELP---ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
E+ LP R+L WN+L+ G EE + M G++P VTF LL C
Sbjct: 601 -EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 659
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVIS 311
S+ +++G I + +E I ++D G L A+ +P++ N +
Sbjct: 660 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 719
Query: 312 WNSLVS 317
W SL++
Sbjct: 720 WRSLLA 725
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 172/612 (28%), Positives = 310/612 (50%), Gaps = 14/612 (2%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW-CFPPEQALHLYGEMGLL 135
++ N ++A++K+ AL +F MP R+ V++ L + C P + LY +
Sbjct: 84 LFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDP---IGLYSRLHRE 140
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
G F+S L + +H +VK G+ SN FVG L+ Y G + A
Sbjct: 141 GHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSA 200
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
R +F+ + +++ VW ++ + E G E+SL S M G PN TF LK
Sbjct: 201 RTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGL 260
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSL 315
+ K + ILK +V + V L+ Y+ G + A K F +P +V+ W+ +
Sbjct: 261 GAFDFAKGVHGQILKTCYV-LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFM 319
Query: 316 VSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGF 375
++ N +A++LF M+ P+ +L +LN C+ + GLG+Q+H +K+GF
Sbjct: 320 IARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGF 379
Query: 376 DEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFG 435
D ++ +ALID+Y KC ++++V +F L+ + N+++ + G +F
Sbjct: 380 DL-DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFR 438
Query: 436 LMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSR 495
+ + EVTFS+ L A + AS +H A+K+ AV+ SL+D Y++
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMDLGVQ--VHGLAIKTNNAKKVAVSNSLIDMYAK 496
Query: 496 CGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCA 555
CG ++ + +F + + + + ++I+GY+ +G+G+Q L +L M ++ KP+ +TFL
Sbjct: 497 CGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGV 556
Query: 556 LTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKR 615
L+GC++ G++ +G+ F+SM HG++P H++CMV LL R+G P +
Sbjct: 557 LSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEP 616
Query: 616 DCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIRE 675
+W ++L + + NEE R+A+ +++++P D A ++ SN YA +++
Sbjct: 617 SVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA------GAKQWAN 670
Query: 676 VALARKMTREIG 687
VA RK +E+G
Sbjct: 671 VASIRKSMKEMG 682
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 199/419 (47%), Gaps = 8/419 (1%)
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD 200
S + ++L C + +HC ++K G ++F L+ Y+ G + A LFD
Sbjct: 49 SHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFD 108
Query: 201 ELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE 260
E+PERN + L +G+ ++ + YSR+ +G E N F LK+ + +
Sbjct: 109 EMPERNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEI 164
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNA 320
L S I+K+G+ +SN FV AL++ YS CG + A+ FE I ++++ W +VS
Sbjct: 165 CPWLHSPIVKLGY-DSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 321 DNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSV 380
+N D+L+L + M++ G P+ + L + K +H LK +
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP- 282
Query: 381 HAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDE 440
L+ +Y + D+ + VF + K + + ++ G + V+LF M +
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 441 GLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE 500
++P+E T S+ L ++ + + LH +K G + D V+ +L+D Y++C ++
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400
Query: 501 LSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGC 559
++++F LSS N + + ++I GY G G + ++ + + E+TF AL C
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 169/617 (27%), Positives = 312/617 (50%), Gaps = 9/617 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLR-DTVTYNLLISAWCFPPE--QALHLYGEMGLLGI 137
N + + K+ DL++A +F + D V +N ++S++ + + L L+ EM + G
Sbjct: 221 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP 280
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFG-FLSNVFVGGTLVGFYLNVGLREVAR 196
S T S L C + + G ++H V+K S ++V L+ Y G A
Sbjct: 281 APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAE 340
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
+ ++ ++ WN L++G+ + +E+L ++S M G + + V+ ++
Sbjct: 341 RILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLS 400
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV 316
L G +L + ++K G+ +SN+ V N L+D YS C ++F + +++ISW +++
Sbjct: 401 NLLAGMELHAYVIKHGW-DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 459
Query: 317 SVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD 376
+ A ND +ALELF + L +L + S + + + K+IHCH L+ G
Sbjct: 460 AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL 519
Query: 377 EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGL 436
+ + Q+ L+D+YGKC ++ + VFES+ + + S+++S + G + VELF
Sbjct: 520 DTVI--QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRR 577
Query: 437 MIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRC 496
M++ GL D V + ++ + + +HC+ L+ G + ++A +++D Y+ C
Sbjct: 578 MVETGLSADSVALLCI--LSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACC 635
Query: 497 GHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL 556
G ++ + +F+ + + +TSMIN Y +G GK + + M + + PD I+FL L
Sbjct: 636 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALL 695
Query: 557 TGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRD 616
C+H G++ EGR M+ + ++P H+ C+VD+L RA +
Sbjct: 696 YACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPT 755
Query: 617 CFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREV 676
+W +LL +CRSH +E+G AAQ L+EL+P +P + SN +AE G ++ ++R
Sbjct: 756 AEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAK 815
Query: 677 ALARKMTREIGHSSIEI 693
A M + G S IE+
Sbjct: 816 MKASGMEKHPGCSWIEM 832
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 225/480 (46%), Gaps = 7/480 (1%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWCF--PPEQALHLYGEMGLLGIRETSTTFSSVLAV 150
L+ A VF MP R +N +I A+ P AL LY M + G+ ++F ++L
Sbjct: 132 LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKA 191
Query: 151 CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAV- 209
CA+ R G ++H +VK G+ S F+ LV Y AR LFD E+ AV
Sbjct: 192 CAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVL 251
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
WN +L + G E+L + M G PN T L C GK++ + +L
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 311
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
K S ++V NAL+ Y+ CG + A++ + +V++WNSL+ N + +AL
Sbjct: 312 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEAL 371
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDM 389
E F+ M G S+ ++ + R + G ++H + +K G+D ++ + LIDM
Sbjct: 372 EFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD-SNLQVGNTLIDM 430
Query: 390 YGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTF 449
Y KC+ F + + L +++ + + +ELF + + + DE+
Sbjct: 431 YSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490
Query: 450 STTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL 509
+ L+A SV S +HC L+ G+ D + L+D Y +C ++ + ++FE++
Sbjct: 491 GSILRASSVLKSMLIVKE--IHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESI 547
Query: 510 SSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGR 569
+ + +TSMI+ A NG + + + MVE GL D + LC L+ + +GR
Sbjct: 548 KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGR 607
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 197/412 (47%), Gaps = 5/412 (1%)
Query: 143 TFSSVLAVCARSGFHREGVQVHCRVVK-FGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
F+ VL +C + +G Q+H R+ K F F+ G LV Y G + A ++FDE
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+P+R WN ++ + G +L Y M +GV +F LLK C+ R + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLVSVNA 320
+L S ++K+G+ S F+ NALV Y+ L A++ F+ + + + WNS++S +
Sbjct: 202 SELHSLLVKLGY-HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 321 DNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSV 380
+ + LELF M + G +P+ ++V L +C LGK+IH LK +
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 381 HAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDE 440
+ +ALI MY +C + + + + + NSL+ ++ +E F MI
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 441 GLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE 500
G DEV+ ++ + A + + LH + +K G + + V +L+D YS+C
Sbjct: 381 GHKSDEVSMTSIIAA--SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTC 438
Query: 501 LSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
+ F + + I +T++I GYA+N + L + + +K ++ DE+
Sbjct: 439 YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 160/334 (47%), Gaps = 18/334 (5%)
Query: 234 CFDGV-----------EPNGV--TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
CFDGV E N F Y+L++C R +++G++L S I K F+
Sbjct: 59 CFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFL 118
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
A LV Y CG L A+K F+ +P +WN+++ N AL L+ M++ G
Sbjct: 119 AGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV 178
Query: 341 SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSV 400
+ S LL +C++ +I G ++H +KLG+ + +AL+ MY K D+ ++
Sbjct: 179 PLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGY-HSTGFIVNALVSMYAKNDDLSAAR 237
Query: 401 AVFESLTKRTLECC-NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
+F+ ++ NS+++S S G + + +ELF M G P+ T + L A
Sbjct: 238 RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGF 297
Query: 460 ASATFTSSQLLHCFALKSGVEGDAAVAC-SLMDAYSRCGHVELSLQIFETLSSPNAICFT 518
+ A + +H LKS C +L+ Y+RCG + + +I +++ + + +
Sbjct: 298 SYAKL--GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 519 SMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
S+I GY +N M K+ L M+ G K DE++
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSM 389
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 176/617 (28%), Positives = 322/617 (52%), Gaps = 25/617 (4%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISA---WCFPPEQALHLYGEMG 133
++ N D ++K DL S L F M RD+V++N+++ + F E+ L + ++
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFE-EEGLWWFSKLR 119
Query: 134 LLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE 193
+ G ++T V+ C F +G ++H V++ GF V +++ Y +
Sbjct: 120 VWGFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS 177
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVC 252
AR+LFDE+ ER++ W+V++R + + L + M + EP+ VT +LK C
Sbjct: 178 -ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISW 312
+ ++ G+ + ++ GF +++FV N+L+D YS + A + F+ N++SW
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
NS+++ N +ALE+F +M ++V LL C E+ K IH ++
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 373 LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVE 432
G++ V A S+LID Y CS ++ + V +S+T + + C+++++ L+H G + + +
Sbjct: 357 RGYESNEV-ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE-GDAAVACSLMD 491
+F M D P+ +T + L A SVSA +S+ H A++ + D +V S++D
Sbjct: 416 IFCHMRD---TPNAITVISLLNACSVSAD--LRTSKWAHGIAIRRSLAINDISVGTSIVD 470
Query: 492 AYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEIT 551
AY++CG +E++ + F+ ++ N I +T +I+ YA NG+ + LA+ M +KG P+ +T
Sbjct: 471 AYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVT 530
Query: 552 FLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQT 611
+L AL+ CNH G+VK+G ++F SM +P +H+SC+VD+L RAG
Sbjct: 531 YLAALSACNHGGLVKKGLMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
Query: 612 PD--KRDCFMWSSLLRSCRSH-KNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFD 668
P+ K W ++L CR+ K + + ++EL+P L +S + F
Sbjct: 590 PEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEP------LCSSGYLLASSTFA 643
Query: 669 ASREIREVALARKMTRE 685
A + +VA+ R++ +E
Sbjct: 644 AEKSWEDVAMMRRLVKE 660
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 284/539 (52%), Gaps = 13/539 (2%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP--ERNLAVWNVLLRGFCE 219
QVH +V+ GF V +G +L Y+ + A F+ +P +RN WN +L G+ +
Sbjct: 25 QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSK 84
Query: 220 LG--CVEESLNYYSRM---CFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFV 274
C + L Y+RM C DGV+ + F +K C L G + +K G +
Sbjct: 85 SKTCCYSDVLLLYNRMRRHC-DGVDSFNLVFA--IKACVGLGLLENGILIHGLAMKNG-L 140
Query: 275 ESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTV 334
+ + +VA +LV+ Y+ G + A+K F+ IPV N + W L+ + LF +
Sbjct: 141 DKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCL 200
Query: 335 MQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
M+ G + +L+ L+ +C +GK +H +++ F + S + Q+++IDMY KC
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCR 260
Query: 395 DIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
++++ +FE+ R + +L++ + C + +LF M+ E ++P++ T + L
Sbjct: 261 LLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAIL- 319
Query: 455 ALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNA 514
+S S+ + + +H + +++G+E DA S +D Y+RCG+++++ +F+ + N
Sbjct: 320 -VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNV 378
Query: 515 ICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDS 574
I ++SMIN + NG+ ++ L H M + + P+ +TF+ L+ C+H+G VKEG F+S
Sbjct: 379 ISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFES 438
Query: 575 MKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEE 634
M +GV P++ H++CMVDLL RAG P K W +LL +CR HK +
Sbjct: 439 MTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVD 498
Query: 635 VGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
+ A+ L+ ++P+ +V++ SN YA+ G ++ +R + + +G S+ E+
Sbjct: 499 LAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 192/387 (49%), Gaps = 15/387 (3%)
Query: 85 DAFIKSRDLNSALAVFHTMPL--RDTVTYNLLISAW------CFPPEQALHLYGEMGLL- 135
+A+I+S L+ A + F+ +P R+ ++N ++S + C+ L LY M
Sbjct: 47 NAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCY--SDVLLLYNRMRRHC 104
Query: 136 -GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
G+ + F+ + C G G+ +H +K G + +V +LV Y +G E
Sbjct: 105 DGVDSFNLVFA--IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMES 162
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A+++FDE+P RN +W VL++G+ + E + M G+ + +T L+K C N
Sbjct: 163 AQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN 222
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
GK + ++ F++ + ++ +++D Y C L A+K FE NV+ W +
Sbjct: 223 VFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTT 282
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
L+S A + +A +LF M P+ +L +L SCS + GK +H + ++ G
Sbjct: 283 LISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG 342
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF 434
+ +V+ S IDMY +C +I+ + VF+ + +R + +S++ + G ++ ++ F
Sbjct: 343 IEMDAVNFTS-FIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCF 401
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSAS 461
M + ++P+ VTF + L A S S +
Sbjct: 402 HKMKSQNVVPNSVTFVSLLSACSHSGN 428
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 149/316 (47%), Gaps = 16/316 (5%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLL 135
Y + ID ++K R L++A +F T R+ V + LIS + C +A L+ +M
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
I T +++L C+ G R G VH +++ G + + + Y G ++A
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
R +FD +PERN+ W+ ++ F G EE+L+ + +M V PN VTF LL CS+
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426
Query: 256 RRLNEG-KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS-WN 313
+ EG K+ +S G V A +VD G + AK + +PV+ + S W
Sbjct: 427 GNVKEGWKQFESMTRDYGVVPEEEHYA-CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWG 485
Query: 314 SLVS---VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
+L+S ++ + DL + E +L P S+ LL++ + G+ + ++C
Sbjct: 486 ALLSACRIHKEVDLAGEIAE-----KLLSMEPEKSSVYVLLSNI--YADAGMWEMVNCVR 538
Query: 371 LKLGFDEGSVH-AQSA 385
K+G H QSA
Sbjct: 539 RKMGIKGYRKHVGQSA 554
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 179/626 (28%), Positives = 313/626 (50%), Gaps = 47/626 (7%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYG 130
P +T N I A+ SR L+ A +F + P+++T+++N LIS +C +A +L+
Sbjct: 55 PERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFW 114
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
EM GI+ T SVL +C G Q+H +K GF +V V L+ Y
Sbjct: 115 EMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCK 174
Query: 191 LREVARELFDELP-ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLL 249
A LF+ + E+N W +L G+ + G +++ + + +G + N TF +L
Sbjct: 175 RISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVL 234
Query: 250 KVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV 309
C++ G ++ CI+K GF ++NI+V +AL+D Y+ C + A+ E + V++V
Sbjct: 235 TACASVSACRVGVQVHCCIVKSGF-KTNIYVQSALIDMYAKCREMESARALLEGMEVDDV 293
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLN--SCSRAEEIGLGKQIH 367
+SWNS++ L+ +AL +F M ++ +LN + SR E+ + H
Sbjct: 294 VSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRT-EMKIASSAH 352
Query: 368 CHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGAT 427
C +K G+ + +AL+DMY K ++S++ VFE + ++ + +L+T +H G+
Sbjct: 353 CLIVKTGYATYKL-VNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSY 411
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTS-SQLLHCFALKSGVEGDAAVA 486
+ ++LF M G+ PD++ T LS SA T Q +H +KSG +V
Sbjct: 412 DEALKLFCNMRVGGITPDKI---VTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVN 468
Query: 487 CSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLK 546
SL+ Y++CG +E + IF ++ + I +T +I GYA+N
Sbjct: 469 NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN------------------- 509
Query: 547 PDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXX 606
G++++ + FDSM++V+G+ P H++CM+DL R+G
Sbjct: 510 ----------------GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQ 553
Query: 607 XXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGN 666
Q + D +W ++L + R H N E G RAA+ L+EL+P++ ++Q SN Y+ G
Sbjct: 554 LLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGR 613
Query: 667 FDASREIREVALARKMTREIGHSSIE 692
D + +R + +R +++E G S +E
Sbjct: 614 QDEAANVRRLMKSRNISKEPGCSWVE 639
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 178/612 (29%), Positives = 307/612 (50%), Gaps = 13/612 (2%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEM----GLLGIRETSTTFSS 146
+ AL +F MP R+ V++N +I + E++ L GEM G T +
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 147 VLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERN 206
VL VCAR G VH VK + + L+ Y G A+ +F +N
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 207 LAVWNVLLRGFCELGCVEESLNYYSRMCFDG--VEPNGVTFCYLLKVCSNHRRLNEGKKL 264
+ WN ++ GF G + + +M G V+ + VT + VC + L K+L
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 265 QSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDL 324
LK FV N VANA V Y+ CG L A++ F I + V SWN+L+ +A ++
Sbjct: 418 HCYSLKQEFV-YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 476
Query: 325 LCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQS 384
+L+ M++ G P ++ LL++CS+ + + LGK++H ++ + E +
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR-NWLERDLFVYL 535
Query: 385 ALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMP 444
+++ +Y C ++ + A+F+++ ++L N+++T G + +F M+ G+
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 445 DEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQ 504
++ A S+ S H +ALK +E DA +ACSL+D Y++ G + S +
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREA--HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 505 IFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGM 564
+F L + + +MI GY +G+ K+ + + M G PD++TFL LT CNH+G+
Sbjct: 654 VFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGL 713
Query: 565 VKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXX-XXXXXXXXQTPDKRDCFMWSSL 623
+ EG D MKS G++P+ +H++C++D+L RAG + ++ D +W SL
Sbjct: 714 IHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSL 773
Query: 624 LRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMT 683
L SCR H+N E+G + A L EL+P+ P ++ SN YA +G ++ R++R+ +
Sbjct: 774 LSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLR 833
Query: 684 REIGHSSIEIRQ 695
++ G S IE+ +
Sbjct: 834 KDAGCSWIELNR 845
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 222/484 (45%), Gaps = 21/484 (4%)
Query: 99 VFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEM-GLLGIRETSTTFSSVLAVCARSG 155
VF + ++ +N +IS++ ++ L + EM + T+ V+ CA
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 156 FHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLR 215
G+ VH VVK G + +VFVG LV FY G A +LFD +PERNL WN ++R
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 216 GFCELGCVEESLNYYSRMCFDGVE----PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKM 271
F + G EES M + + P+ T +L VC+ R + GK + +K+
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV---SVNADNDLLCDA 328
++ + + NAL+D YS CGC+ A+ F+ +NV+SWN++V S D D
Sbjct: 322 R-LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 329 LELFTVMQLWGQSPSVRSLVGLLNS---CSRAEEIGLGKQIHCHALKLGFDEGSVHAQSA 385
L L G V +LN+ C + K++HC++LK F + A +A
Sbjct: 381 LR----QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA-NA 435
Query: 386 LIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPD 445
+ Y KC + + VF + +T+ N+L+ + + ++ M GL+PD
Sbjct: 436 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 495
Query: 446 EVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQI 505
T + L A S S +H F +++ +E D V S++ Y CG + +
Sbjct: 496 SFTVCSLLSACSKLKSLRLGKE--VHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 506 FETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMV 565
F+ + + + + ++I GY +NG + L V MV G++ I+ + C+ +
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 613
Query: 566 KEGR 569
+ GR
Sbjct: 614 RLGR 617
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 202/407 (49%), Gaps = 20/407 (4%)
Query: 182 LVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC-FDGVEP 240
++ Y G + +R +FD L +NL WN ++ + +E L + M + P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 241 NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKS 300
+ T+ ++K C+ + G + ++K G VE ++FV NALV FY G + A +
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-DVFVGNALVSFYGTHGFVTDALQL 244
Query: 301 FEAIPVENVISWNSLVSVNADNDLLCDA-LELFTVMQLWGQS---PSVRSLVGLLNSCSR 356
F+ +P N++SWNS++ V +DN ++ L L +M+ G P V +LV +L C+R
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Query: 357 AEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNS 416
EIGLGK +H A+KL D+ V +AL+DMY KC I ++ +F+ + + N+
Sbjct: 305 EREIGLGKGVHGWAVKLRLDKELV-LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 417 LMTSLSHCGATQDVVELFGLMI--DEGLMPDEVTFSTTLKALSVSASATFTSS-QLLHCF 473
++ S G T ++ M+ E + DEVT L A+ V +F S + LHC+
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI---LNAVPVCFHESFLPSLKELHCY 420
Query: 474 ALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQG 533
+LK + VA + + +Y++CG + + ++F + S + ++I G+A++ +
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 534 LAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHG 580
L M GL PD T L+ C+ ++ G K VHG
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG-------KEVHG 520
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 164/361 (45%), Gaps = 16/361 (4%)
Query: 214 LRGFCELGCVEESLNYYSRMCFDGVEPNGV------TFCYLLKVCSNHRRLNEGKKLQSC 267
+ FCE G +++S D + LL+ + + G+K+
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 268 ILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCD 327
+ + ++ + ++ Y+ CG ++ F+A+ +N+ WN+++S + N+L +
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 328 ALELFTVM-QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSAL 386
LE F M P + ++ +C+ ++G+G +H +K G E V +AL
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE-DVFVGNAL 228
Query: 387 IDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDE----GL 442
+ YG + ++ +F+ + +R L NS++ S G +++ L G M++E
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAF 288
Query: 443 MPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELS 502
MPD T T L + +H +A+K ++ + + +LMD YS+CG + +
Sbjct: 289 MPDVATLVTVLPVCAREREIGLGKG--VHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 503 LQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKG--LKPDEITFLCALTGCN 560
IF+ ++ N + + +M+ G++ G VL M+ G +K DE+T L A+ C
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 561 H 561
H
Sbjct: 407 H 407
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 268 bits (686), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 183/660 (27%), Positives = 308/660 (46%), Gaps = 54/660 (8%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTY--NLLISAW----CFPPEQALHLYGEMGLLGI 137
I +I L+ A+++ P D Y N LI ++ C + L+L+G M L
Sbjct: 66 ISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGC--ANKCLYLFGLMHSLSW 123
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
+ TF V C R G H + GF+SNVFVG LV Y AR+
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFD-GVEPNGVTFCYLLKVCSNHR 256
+FDE+ ++ WN ++ + +LG + +L +SRM + G P+ +T +L C++
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV 316
+ GK+L C + N+FV N LVD Y+ CG + A F + V++V+SWN++V
Sbjct: 244 THSLGKQLH-CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 317 SVNADNDLLCDALELFTVMQ---------LW--------------------------GQS 341
+ + DA+ LF MQ W G
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 342 PSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD-EGSVHAQ-----SALIDMYGKCSD 395
P+ +L+ +L+ C+ + GK+IHC+A+K D + H + LIDMY KC
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 396 IESSVAVFESLT--KRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL 453
++++ A+F+SL+ +R + ++ S G +EL M +E F+ +
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 454 KALSVSASATFTSSQLLHCFALKSGVEG-DAAVACSLMDAYSRCGHVELSLQIFETLSSP 512
++ ++ A + +H +AL++ V+ L+D Y++CG + + +F+ + +
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 513 NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILF 572
N + +TS++ GY +G G++ L + M G K D +T L L C+H+GM+ +G F
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 573 DSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKN 632
+ MK+V GV P H++C+VDLL RAG + P + +W + L CR H
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Query: 633 EEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
E+G AA+ + EL + + SN YA G + IR + + + + G S +E
Sbjct: 663 VELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/616 (27%), Positives = 309/616 (50%), Gaps = 14/616 (2%)
Query: 85 DAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETST 142
D + K A +F ++ DT+++ ++IS+ + +AL Y EM G+
Sbjct: 167 DLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEF 226
Query: 143 TFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL 202
TF +L + G G +H ++ G NV + +LV FY E A + +
Sbjct: 227 TFVKLLGASSFLGLEF-GKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSS 285
Query: 203 PERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGK 262
E+++ +W ++ GF +E++ + M G++PN T+ +L +CS R L+ GK
Sbjct: 286 GEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGK 345
Query: 263 KLQSCILKMGFVESNIFVANALVDFYSACGCL-VGAKKSFEAIPVENVISWNSLVSVNAD 321
++ S +K+GF E + V NALVD Y C V A + F A+ NV+SW +L+ D
Sbjct: 346 QIHSQTIKVGF-EDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVD 404
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
+ + D L M P+V +L G+L +CS+ + +IH + L+ D G +
Sbjct: 405 HGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD-GEMV 463
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
++L+D Y ++ + V S+ +R SL+T + G + + + M +G
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Query: 442 LMPDEVTFSTTLKALSVSASATF---TSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGH 498
+ D+++ +SASA + + LHC+++KSG G A+V SL+D YS+CG
Sbjct: 524 IRMDQLSLPGF-----ISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGS 578
Query: 499 VELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTG 558
+E + ++FE +++P+ + + +++G A NG L+ M K +PD +TFL L+
Sbjct: 579 LEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA 638
Query: 559 CNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCF 618
C++ + G F MK ++ ++P H+ +V +L RAG K +
Sbjct: 639 CSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAM 698
Query: 619 MWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVAL 678
++ +LLR+CR N +G A + L P DPA+++ ++ Y E G + +++ R +
Sbjct: 699 IFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMT 758
Query: 679 ARKMTREIGHSSIEIR 694
+++++++G S++E++
Sbjct: 759 EKRLSKKLGKSTVEVQ 774
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 156/557 (28%), Positives = 257/557 (46%), Gaps = 18/557 (3%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIR 138
N + ++K+ + +A +F M R + ++ISA+ E AL L+ EM G
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
TFSSV+ CA G +VH V+K GF N VG +L Y G + A EL
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
F L + W +++ E+L +YS M GV PN TF LL S+ L
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLG-ASSFLGL 240
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSV 318
GK + S I+ G + N+ + +LVDFYS + A + + ++V W S+VS
Sbjct: 241 EFGKTIHSNIIVRG-IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 319 NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG 378
N +A+ F M+ G P+ + +L+ CS + GKQIH +K+GF E
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGF-ED 358
Query: 379 SVHAQSALIDMYGKC--SDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGL 436
S +AL+DMY KC S++E+S VF ++ + +L+ L G QD L
Sbjct: 359 STDVGNALVDMYMKCSASEVEAS-RVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLME 417
Query: 437 MIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRC 496
M+ + P+ VT S L+A S +H + L+ V+G+ V SL+DAY+
Sbjct: 418 MVKREVEPNVVTLSGVLRACSKLRHVRRVLE--IHAYLLRRHVDGEMVVGNSLVDAYASS 475
Query: 497 GHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL 556
V+ + + ++ + I +TS++ + G + L+V++ M G++ D+++ +
Sbjct: 476 RKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFI 535
Query: 557 TGCNHTGMVKEGRILF-DSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQ--TPD 613
+ + G ++ G+ L S+KS G + +VD+ + G + TP
Sbjct: 536 SASANLGALETGKHLHCYSVKS--GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP- 592
Query: 614 KRDCFMWSSLLRSCRSH 630
D W+ L+ S+
Sbjct: 593 --DVVSWNGLVSGLASN 607
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 206/423 (48%), Gaps = 11/423 (2%)
Query: 147 VLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERN 206
+L+ C S R G+ +HC V+KFG L N+ + L+ YL AR+LFDE+ R
Sbjct: 30 ILSFC-ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 207 LAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQS 266
+ W V++ F + +L+ + M G PN TF +++ C+ R ++ G ++
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 267 CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLC 326
++K GF E N V ++L D YS CG A + F ++ + ISW ++S
Sbjct: 149 SVIKTGF-EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWR 207
Query: 327 DALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL--GKQIHCHALKLGFDEGSVHAQS 384
+AL+ ++ M G P+ + V LL + S +GL GK IH + + G V ++
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSF---LGLEFGKTIHSNIIVRGIPLNVV-LKT 263
Query: 385 ALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMP 444
+L+D Y + S +E +V V S ++ + S+++ ++ V F M GL P
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 445 DEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVEL-SL 503
+ T+S L S S F + +H +K G E V +L+D Y +C E+ +
Sbjct: 324 NNFTYSAILSLCSAVRSLDF--GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEAS 381
Query: 504 QIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG 563
++F + SPN + +T++I G +G + +L MV++ ++P+ +T L C+
Sbjct: 382 RVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLR 441
Query: 564 MVK 566
V+
Sbjct: 442 HVR 444
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 186/656 (28%), Positives = 318/656 (48%), Gaps = 54/656 (8%)
Query: 65 QTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCF--PP 122
Q + S V+ N I ++ R L+ A VF M R+ VT+ ++S + P
Sbjct: 28 QAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKP 87
Query: 123 EQALHLYGEMGLLGIRETSTTF--SSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGG 180
+A+ LY M L E + F S+VL C G + G+ V+ R+ K +V +
Sbjct: 88 NKAIELYRRM-LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMN 146
Query: 181 TLVGFYLN-------------------------------VGLREVARELFDELPERNLAV 209
++V Y+ GL + A LF +P+ N+
Sbjct: 147 SVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVS 206
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
WN L+ GF + G +L + RM +G+ +G LK CS L GK+L C++
Sbjct: 207 WNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVV 265
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSF--EAIPVENVIS-WNSLVS---VNADND 323
K G +ES+ F +AL+D YS CG L+ A F E + V + ++ WNS++S +N +N+
Sbjct: 266 KSG-LESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENE 324
Query: 324 LLCDALELFTVMQLWGQSPSVRS--LVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
L+ ++Q++ S L G L C + LG Q+H + G++ +
Sbjct: 325 A-----ALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYI- 378
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
S L+D++ +I+ + +F L + + + L+ G LF +I G
Sbjct: 379 VGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLG 438
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVEL 501
L D+ S LK S AS + + +H +K G E + A +L+D Y +CG ++
Sbjct: 439 LDADQFIVSNILKVCSSLASLGW--GKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDN 496
Query: 502 SLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNH 561
+ +F+ + + + +T +I G+ +NG ++ H M+ G++P+++TFL L+ C H
Sbjct: 497 GVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRH 556
Query: 562 TGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWS 621
+G+++E R ++MKS +G++P H+ C+VDLL +AG + P + D +W+
Sbjct: 557 SGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWT 616
Query: 622 SLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVA 677
SLL +C +HKN + T A+ L++ PDDP+V+ SN YA +G +D ++RE A
Sbjct: 617 SLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAA 672
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/494 (24%), Positives = 205/494 (41%), Gaps = 61/494 (12%)
Query: 151 CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVW 210
C + + G + V+K G NVF+ ++ Y++ L A ++FDE+ ERN+ W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCY--LLKVCSNHRRLNEGKKLQSCI 268
++ G+ G +++ Y RM D E F Y +LK C + G + I
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRM-LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI 133
Query: 269 LKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI------------------------ 304
K + ++ + N++VD Y G L+ A SF+ I
Sbjct: 134 GKEN-LRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEA 192
Query: 305 -------PVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRA 357
P NV+SWN L+S D ALE MQ G +L L +CS
Sbjct: 193 VTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 358 EEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVF--ESL-TKRTLECC 414
+ +GKQ+HC +K G E S A SALIDMY C + + VF E L ++
Sbjct: 252 GLLTMGKQLHCCVVKSGL-ESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 415 NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQL---LH 471
NS+++ + + L + L D T S LK + + +L +H
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALK-----ICINYVNLRLGLQVH 365
Query: 472 CFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGK 531
+ SG E D V L+D ++ G+++ + ++F L + + I F+ +I G ++G
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNS 425
Query: 532 QGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV------QPDQ 585
+ +++ GL D+ L C+ + G K +HG+ + +
Sbjct: 426 LAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG-------KQIHGLCIKKGYESEP 478
Query: 586 RHFSCMVDLLCRAG 599
+ +VD+ + G
Sbjct: 479 VTATALVDMYVKCG 492
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 177/414 (42%), Gaps = 42/414 (10%)
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVEN 308
L+ C + G+ +Q+ ++K G + N+F+AN ++ Y L A K F+ + N
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQG-ISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERN 70
Query: 309 VISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLV--GLLNSCSRAEEIGLGKQI 366
+++W ++VS + A+EL+ M L + + + +L +C +I LG +
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRM-LDSEEEAANEFMYSAVLKACGLVGDIQLGILV 129
Query: 367 HCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGA 426
+ K G V ++++DMY K + + + F+ + + + N+L++ G
Sbjct: 130 YERIGKENL-RGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGL 188
Query: 427 TQDVVELFGLM---------------ID---------------EGLMPDEVTFSTTLKAL 456
+ V LF M +D EGL+ D LKA
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKAC 248
Query: 457 SVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIF--ETLSSPNA 514
S T + LHC +KSG+E +L+D YS CG + + +F E L+ ++
Sbjct: 249 SF--GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 515 IC-FTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFD 573
+ + SM++G+ N + L +L + + L D T AL C + ++ G +
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLG-LQVH 365
Query: 574 SMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSC 627
S+ V G + D S +VDL G + P+K D +S L+R C
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK-DIIAFSGLIRGC 418
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 175/659 (26%), Positives = 321/659 (48%), Gaps = 20/659 (3%)
Query: 52 QRHQSLSFSFIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSAL--------AVFHTM 103
+++QSL F Q+ + + V T R + + + AL +F M
Sbjct: 16 KQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEM 75
Query: 104 PLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIR--ETSTTFSSVLAVCARSGFHRE 159
P ++YN++I + A+ ++ M G++ T+ V +
Sbjct: 76 PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 160 GVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCE 219
G+ VH R+++ F + +V L+ Y+N G E+AR++FD + R++ WN ++ G+
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
G + ++L + M + V+ + T +L VC + + L G+ + +++ + I
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK-LVEEKRLGDKIE 254
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
V NALV+ Y CG + A+ F+ + +VI+W +++ ++ + +ALEL +MQ G
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
P+ ++ L++ C A ++ GK +H A++ + +++LI MY KC ++
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV-YSDIIIETSLISMYAKCKRVDLC 373
Query: 400 VAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
VF +K ++++ D + LF M E + P+ T ++ L A +
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYA-- 431
Query: 460 ASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIF----ETLSSPNAI 515
A A + +HC+ K+G A L+ YS+CG +E + +IF E S + +
Sbjct: 432 ALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVV 491
Query: 516 CFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSM 575
+ ++I+GY +G G L V MV G+ P+EITF AL C+H+G+V+EG LF M
Sbjct: 492 LWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFM 551
Query: 576 KSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEV 635
+ H++C+VDLL RAG P + +W +LL +C +H+N ++
Sbjct: 552 LEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQL 611
Query: 636 GTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
G AA L EL+P++ ++ +N YA +G + ++R + + ++ GHS+IEIR
Sbjct: 612 GEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 13/246 (5%)
Query: 343 SVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAV 402
SV+ LLN + + I K +HCH + G G H S L Y C I + +
Sbjct: 14 SVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSG--HILSTLSVTYALCGHITYARKL 71
Query: 403 FESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGL--MPDEVTFSTTLKALSVSA 460
FE + + +L N ++ G D + +F M+ EG+ +PD T+ KA
Sbjct: 72 FEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELK 131
Query: 461 SATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSM 520
S ++H L+S D V +L+ Y G VE++ +F+ + + + I + +M
Sbjct: 132 SMKL--GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189
Query: 521 INGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHG 580
I+GY RNG L + MV + + D T + L C H ++ GR +VH
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR-------NVHK 242
Query: 581 VQPDQR 586
+ ++R
Sbjct: 243 LVEEKR 248
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 166/596 (27%), Positives = 310/596 (52%), Gaps = 11/596 (1%)
Query: 104 PLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGV 161
P + + ++L+I A+ E+AL LY +M G+R T T+ VL CA +G
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
+H V F ++++V LV FY G E+A ++FDE+P+R++ WN ++ GF
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 222 CVEESLNYYSRMC-FDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
C+ + + + M DG+ PN T + L EGK + +MGF +++ V
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF-SNDLVV 242
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
++D Y+ C++ A++ F+ +N ++W++++ +N+++ +A E+F M +
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302
Query: 341 SPSVRSL-VGL-LNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIES 398
V + +GL L C+R ++ G+ +HC+A+K GF + Q+ +I Y K +
Sbjct: 303 VAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFIL-DLTVQNTIISFYAKYGSLCD 361
Query: 399 SVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSV 458
+ F + + + NSL+T ++ LF M G+ PD T L A S
Sbjct: 362 AFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSH 421
Query: 459 SASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFT 518
A+ SS H + + G + ++ +LMD Y++CG ++++ ++F+T+ + + +
Sbjct: 422 LAALGHGSS--CHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWN 479
Query: 519 SMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSM-KS 577
+M+ G+ +G+GK+ L++ ++M E G+ PDE+T L L+ C+H+G+V EG+ LF+SM +
Sbjct: 480 TMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRG 539
Query: 578 VHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGT 637
V P H++CM DLL RAG + P + D + +LL +C ++KN E+G
Sbjct: 540 DFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGN 599
Query: 638 RAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
++ + L ++ L SN Y+ ++ + IR + R + + G+S +++
Sbjct: 600 EVSKKMQSLGETTESLVL-LSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 239/489 (48%), Gaps = 16/489 (3%)
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGF-LSNVFVGGTLVGFYLNVGLREVARELFDEL 202
F S+L C RS G +H ++K LS+ V L Y + E+AR +FDE+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 203 PER--NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE 260
P N W++++R + E++L+ Y +M GV P T+ ++LK C+ R +++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNA 320
GK + S + F ++++V ALVDFY+ CG L A K F+ +P ++++WN+++S +
Sbjct: 122 GKLIHSHVNCSDFA-TDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 321 DNDLLCDALELFTVM-QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGS 379
+ L D + LF M ++ G SP++ ++VG+ + RA + GK +H + ++GF
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 380 VHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMID 439
V ++ ++D+Y K I + VF+ K+ ++++ ++ E+F M
Sbjct: 241 V-VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM-- 297
Query: 440 EGLMPDEVTFSTTLK-ALSVSASATF---TSSQLLHCFALKSGVEGDAAVACSLMDAYSR 495
L+ D V T + L + A F + + +HC+A+K+G D V +++ Y++
Sbjct: 298 --LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAK 355
Query: 496 CGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCA 555
G + + + F + + I + S+I G N ++ + H M G++PD T L
Sbjct: 356 YGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGV 415
Query: 556 LTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKR 615
LT C+H + G VHG + + ++D+ + G T KR
Sbjct: 416 LTACSHLAALGHGSSC-HGYCVVHGYAVNTSICNALMDMYTKCG-KLDVAKRVFDTMHKR 473
Query: 616 DCFMWSSLL 624
D W+++L
Sbjct: 474 DIVSWNTML 482
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 133/287 (46%), Gaps = 10/287 (3%)
Query: 79 TKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLG 136
+N I + K L A F + L+D ++YN LI+ PE++ L+ EM G
Sbjct: 345 VQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG 404
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
IR TT VL C+ G H V G+ N + L+ Y G +VA+
Sbjct: 405 IRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAK 464
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
+FD + +R++ WN +L GF G +E+L+ ++ M GV P+ VT +L CS+
Sbjct: 465 RVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSG 524
Query: 257 RLNEGKKLQSCILKMGF-VESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNS 314
++EGK+L + + + F V I N + D + G L A +P E ++ +
Sbjct: 525 LVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGT 584
Query: 315 LVSV--NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
L+S N L + E+ MQ G+ + SLV L N+ S AE
Sbjct: 585 LLSACWTYKNAELGN--EVSKKMQSLGE--TTESLVLLSNTYSAAER 627
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/641 (27%), Positives = 314/641 (48%), Gaps = 48/641 (7%)
Query: 96 ALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRETS----TTFSSVLAVC 151
A F + +D V++N +I+ F + L ++E + T ++VL VC
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAG--FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
Query: 152 ARSGFH---REGVQVHCRVVKFGFL-SNVFVGGTLVGFYLNVGLREVARELFDELPERNL 207
A + R G Q+H VV+ +L ++VFV +LV FYL VG E A LF + ++L
Sbjct: 235 ASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294
Query: 208 AVWNVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQS 266
WNV++ G+ ++ + + G V P+ VT +L VC+ L GK++ S
Sbjct: 295 VSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHS 354
Query: 267 CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLC 326
IL+ ++ + V NAL+ FY+ G A +F + +++ISWN+++ AD+
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQF 414
Query: 327 DALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGF--DEGSVHAQS 384
L L + + +++ LL C + IG K++H +++K G DE +
Sbjct: 415 QFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGN 474
Query: 385 ALIDMYGKCSDIESSVAVFESLT-KRTLECCNSLMTSLSHCGATQDVVELF--------- 434
AL+D Y KC ++E + +F L+ +RTL NSL++ + G+ D LF
Sbjct: 475 ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLT 534
Query: 435 --GLMID--------------------EGLMPDEVTFSTTLKALSVSASATFTSSQLLHC 472
LM+ G+ P+ VT L + AS + H
Sbjct: 535 TWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLV--RQCHG 592
Query: 473 FALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQ 532
+ ++ G+ GD + +L+D Y++CG ++ + +F++ + + + FT+M+ GYA +G GK+
Sbjct: 593 YIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKE 651
Query: 533 GLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMV 592
L + M E +KPD + LT C H G++++G ++DS+++VHG++P ++C V
Sbjct: 652 ALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAV 711
Query: 593 DLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPA 652
DL+ R G Q P + + +W +LLR+C ++ ++G A L++ + DD
Sbjct: 712 DLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTG 771
Query: 653 VWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
+ SN YA ++ E+R + ++M + G S +E+
Sbjct: 772 NHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEV 812
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 225/465 (48%), Gaps = 15/465 (3%)
Query: 76 CVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP-PEQALHLYGEMGL 134
C ++ + K R ++ +F M D V +N++++ + + + M
Sbjct: 55 CSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHF 114
Query: 135 LG-IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG-LR 192
+ +S TF+ VL +C R G G +H ++K G + VG LV Y G +
Sbjct: 115 ADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIF 174
Query: 193 EVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
A FD + ++++ WN ++ GF E + ++ + M + EPN T +L VC
Sbjct: 175 PDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
Query: 253 SNHRR---LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV 309
++ + G+++ S +++ ++++++FV N+LV FY G + A F + +++
Sbjct: 235 ASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEIGLGKQIHC 368
+SWN +++ A N A +LF + G SP +++ +L C++ ++ GK+IH
Sbjct: 295 VSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHS 354
Query: 369 HALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQ 428
+ L+ + +ALI Y + D ++ F ++ + + N+++ + +
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQF 414
Query: 429 DVVELFGLMIDEGLMPDEVTFSTTLK-ALSVSASATFTSSQLLHCFALKSGV---EGDAA 484
+ L +++E + D VT + LK ++V +H +++K+G+ E +
Sbjct: 415 QFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE---VHGYSVKAGLLHDEEEPK 471
Query: 485 VACSLMDAYSRCGHVELSLQIFETLSSPNA-ICFTSMINGYARNG 528
+ +L+DAY++CG+VE + +IF LS + + S+++GY +G
Sbjct: 472 LGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSG 516
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/548 (22%), Positives = 245/548 (44%), Gaps = 34/548 (6%)
Query: 134 LLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE 193
L G F V+ CA G +H V K G ++ V +++ Y +
Sbjct: 14 LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMD 73
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCF-DGVEPNGVTFCYLLKVC 252
+++F ++ + VWN++L G + C E++ ++ M F D +P+ VTF +L +C
Sbjct: 74 DCQKMFRQMDSLDPVVWNIVLTGL-SVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLV-GAKKSFEAIPVENVIS 311
GK + S I+K G +E + V NALV Y+ G + A +F+ I ++V+S
Sbjct: 133 VRLGDSYNGKSMHSYIIKAG-LEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVS 191
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE---IGLGKQIHC 368
WN++++ ++N+++ DA F +M P+ ++ +L C+ ++ G+QIH
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHS 251
Query: 369 HALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQ 428
+ ++ + + V ++L+ Y + IE + ++F + + L N ++ +
Sbjct: 252 YVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWF 311
Query: 429 DVVELFGLMIDEG-LMPDEVTFSTTLKALSVSASAT-FTSSQLLHCFALK-SGVEGDAAV 485
+LF ++ +G + PD VT + L V A T S + +H + L+ S + D +V
Sbjct: 312 KAFQLFHNLVHKGDVSPDSVTI---ISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSV 368
Query: 486 ACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGL 545
+L+ Y+R G + F +S+ + I + ++++ +A + Q L +LH ++ + +
Sbjct: 369 GNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAI 428
Query: 546 KPDEITFLCALTGC-NHTGMVKEGRILFDSMKSVHGV---------QPDQRHFSCMVDLL 595
D +T L L C N G+ K +K VHG + + + + ++D
Sbjct: 429 TLDSVTILSLLKFCINVQGIGK--------VKEVHGYSVKAGLLHDEEEPKLGNALLDAY 480
Query: 596 CRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWL 655
+ G ++R ++SLL + N A + E+ D W
Sbjct: 481 AKCGNVEYAHKIFLGLSERRTLVSYNSLL---SGYVNSGSHDDAQMLFTEMSTTDLTTWS 537
Query: 656 QASNFYAE 663
YAE
Sbjct: 538 LMVRIYAE 545
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 109/239 (45%), Gaps = 4/239 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIR 138
N + ++ S + A +F M D T++L++ + P +A+ ++ E+ G+R
Sbjct: 506 NSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
+ T ++L VCA+ Q H +++ G L ++ + GTL+ Y G + A +
Sbjct: 566 PNTVTIMNLLPVCAQLASLHLVRQCHGYIIR-GGLGDIRLKGTLLDVYAKCGSLKHAYSV 624
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
F R+L ++ ++ G+ G +E+L YS M ++P+ V +L C + +
Sbjct: 625 FQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLI 684
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
+G ++ I + ++ + VD + G L A +PVE N W +L+
Sbjct: 685 QDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLL 743
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/605 (27%), Positives = 303/605 (50%), Gaps = 48/605 (7%)
Query: 121 PPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGG 180
PP ++ + + LL +T + + A + G H + ++++F LS F G
Sbjct: 26 PPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYAL-SKLIEFCILSPHFEG- 83
Query: 181 TLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEP 240
A +F + E NL +WN + RG +L Y M G+ P
Sbjct: 84 -----------LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLP 132
Query: 241 NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMG-----FVESNI---FVAN---------- 282
N TF ++LK C+ + EG+++ +LK+G +V +++ +V N
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVF 192
Query: 283 ------------ALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALE 330
AL+ Y++ G + A+K F+ IPV++V+SWN+++S A+ +ALE
Sbjct: 193 DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALE 252
Query: 331 LFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMY 390
LF M P ++V ++++C+++ I LG+Q+H GF ++ +ALID+Y
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFG-SNLKIVNALIDLY 311
Query: 391 GKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFS 450
KC ++E++ +FE L + + N+L+ +H ++ + LF M+ G P++VT
Sbjct: 312 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTML 371
Query: 451 TTLKALSVSASATFTSSQLLHCFALK--SGVEGDAAVACSLMDAYSRCGHVELSLQIFET 508
+ L A + + + +H + K GV +++ SL+D Y++CG +E + Q+F +
Sbjct: 372 SILPACAHLGAIDI--GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 509 LSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
+ + + +MI G+A +G + M + G++PD+ITF+ L+ C+H+GM+ G
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Query: 569 RILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCR 628
R +F +M + + P H+ CM+DLL +G + D +W SLL++C+
Sbjct: 490 RHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACK 549
Query: 629 SHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGH 688
H N E+G A+ L++++P++P ++ SN YA G ++ + R + + M + G
Sbjct: 550 MHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGC 609
Query: 689 SSIEI 693
SSIEI
Sbjct: 610 SSIEI 614
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 235/522 (45%), Gaps = 69/522 (13%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLI--SAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAV 150
L A++VF T+ + + +N + A P AL LY M LG+ S TF VL
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 151 CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL----------------------- 187
CA+S +EG Q+H V+K G +++V +L+ Y+
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 188 --------NVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE 239
+ G E A++LFDE+P +++ WN ++ G+ E G +E+L + M V
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 240 PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKK 299
P+ T ++ C+ + G+++ I GF SN+ + NAL+D YS CG L A
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF-GSNLKIVNALIDLYSKCGELETACG 322
Query: 300 SFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
FE +P ++VISWN+L+ +L +AL LF M G++P+ +++ +L +C+
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 360 IGLGKQIHCHALK-LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLM 418
I +G+ IH + K L + +++LIDMY KC DIE++ VF S+ ++L N+++
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 419 TSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATF-------------T 465
+ G +LF M G+ PD++TF L A S S
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 502
Query: 466 SSQLLH--CFALKSGVEG----------------DAAVACSLMDAYSRCGHVELSLQIFE 507
+ +L H C G G D + CSL+ A G+VEL E
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 562
Query: 508 TL---SSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLK 546
L N + + N YA G + + +KG+K
Sbjct: 563 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMK 604
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 3/299 (1%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHL 128
++P V + I + + +A +F +P++D V++N +IS + ++AL L
Sbjct: 194 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+ +M +R +T +V++ CA+SG G QVH + GF SN+ + L+ Y
Sbjct: 254 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 313
Query: 189 VGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
G E A LF+ LP +++ WN L+ G+ + +E+L + M G PN VT +
Sbjct: 314 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Query: 249 LKVCSNHRRLNEGKKLQSCILK-MGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
L C++ ++ G+ + I K + V + + +L+D Y+ CG + A + F +I +
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQI 366
++ SWN+++ A + + +LF+ M+ G P + VGLL++CS + + LG+ I
Sbjct: 434 SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 159/573 (27%), Positives = 280/573 (48%), Gaps = 50/573 (8%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGF-------YLNVGLREVARELFDELPERNLAVWNVLL 214
Q+ +++ G + + F L+ F YL+ ++ + + N+ WNV +
Sbjct: 71 QIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVK-----ILKGIENPNIFSWNVTI 125
Query: 215 RGFCELGCVEESLNYYSRMCFDGV---EPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKM 271
RGF E +ES Y +M G P+ T+ L KVC++ R + G + +LK+
Sbjct: 126 RGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKL 185
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALEL 331
+E V NA + +++CG + A+K F+ PV +++SWN L++ A+ +
Sbjct: 186 R-LELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYV 244
Query: 332 FTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYG 391
+ +M+ G P +++GL++SCS ++ GK+ + + + G ++ +AL+DM+
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGL-RMTIPLVNALMDMFS 303
Query: 392 KCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGAT------------------------ 427
KC DI + +F++L KRT+ ++++ + CG
Sbjct: 304 KCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGG 363
Query: 428 -------QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
QD + LF M PDE+T L A S +H + K +
Sbjct: 364 SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSA--CSQLGALDVGIWIHRYIEKYSLS 421
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAM 540
+ A+ SL+D Y++CG++ +L +F + + N++ +T++I G A +G ++ + M
Sbjct: 422 LNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEM 481
Query: 541 VEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGX 600
++ G+ PDEITF+ L+ C H GM++ GR F MKS + P +H+S MVDLL RAG
Sbjct: 482 IDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGL 541
Query: 601 XXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNF 660
P + D +W +LL CR H N E+G +AA+ L+ELDP D +++
Sbjct: 542 LEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGM 601
Query: 661 YAEIGNFDASREIREVALARKMTREIGHSSIEI 693
Y E ++ ++ R + R + + G SSIE+
Sbjct: 602 YGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 185/406 (45%), Gaps = 38/406 (9%)
Query: 86 AFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEM---GLLGIRET 140
A +SR L+ ++ + + + ++N+ I + P+++ LY +M G R
Sbjct: 96 ALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPD 155
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD 200
T+ + VCA G + V+K V + + + G E AR++FD
Sbjct: 156 HFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD 215
Query: 201 ELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE 260
E P R+L WN L+ G+ ++G E+++ Y M +GV+P+ VT L+ CS LN
Sbjct: 216 ESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNR 275
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNA 320
GK+ + + G + I + NAL+D +S CG + A++ F+ + ++SW +++S A
Sbjct: 276 GKEFYEYVKENG-LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYA 334
Query: 321 DNDLL-------------------------------CDALELFTVMQLWGQSPSVRSLVG 349
LL DAL LF MQ P +++
Sbjct: 335 RCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIH 394
Query: 350 LLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR 409
L++CS+ + +G IH + K +V ++L+DMY KC +I +++VF + R
Sbjct: 395 CLSACSQLGALDVGIWIHRYIEKYSLSL-NVALGTSLVDMYAKCGNISEALSVFHGIQTR 453
Query: 410 TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
+++ L+ G + F MID G+ PDE+TF L A
Sbjct: 454 NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 3/236 (1%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLI--SAWCFPPEQALHLYGEMGLLGIRETS 141
I + + L+ + +F M +D V +N +I S + AL L+ EM +
Sbjct: 330 ISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDE 389
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
T L+ C++ G G+ +H + K+ NV +G +LV Y G A +F
Sbjct: 390 ITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHG 449
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+ RN + ++ G G +++Y++ M G+ P+ +TF LL C + + G
Sbjct: 450 IQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTG 509
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
+ S + + + + +VD G L A + E++P+E + W +L+
Sbjct: 510 RDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALL 565
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 165/591 (27%), Positives = 292/591 (49%), Gaps = 41/591 (6%)
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNV--GLREV 194
I + F S+L VC + + Q+H + + G N L F+ + G
Sbjct: 30 ISNDYSRFISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSY 86
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK-VCS 253
A +LF ++PE ++ VWN +++G+ ++ C E + Y M +GV P+ TF +LL +
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWN 313
+ L GKKL ++K G + SN++V NALV YS CG + A+ F+ E+V SWN
Sbjct: 147 DGGALACGKKLHCHVVKFG-LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWN 205
Query: 314 SLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL 373
++S +++EL M+ SP+ +L+ +L++CS+ ++ L K++H + +
Sbjct: 206 LMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC 265
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH---------- 423
E S+ ++AL++ Y C +++ +V +F S+ R + S++
Sbjct: 266 K-TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTY 324
Query: 424 ---------------------CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASA 462
G + +E+F M G++PDE T + L A + S
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 463 TFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMIN 522
+ + + K+ ++ D V +L+D Y +CG E + ++F + + +T+M+
Sbjct: 385 EI--GEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 523 GYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQ 582
G A NG G++ + V M + ++PD+IT+L L+ CNH+GMV + R F M+S H ++
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE 502
Query: 583 PDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQV 642
P H+ CMVD+L RAG + P + +W +LL + R H +E + AA+
Sbjct: 503 PSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKK 562
Query: 643 LVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
++EL+PD+ AV+ N YA + RE+R + + + G S IE+
Sbjct: 563 ILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEV 613
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 133/284 (46%), Gaps = 9/284 (3%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW----CFPPEQALHLYGEMGLLGIRE 139
+ +++ +L A F MP+RD +++ ++I + CF ++L ++ EM G+
Sbjct: 309 VKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCF--NESLEIFREMQSAGMIP 366
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
T SVL CA G G + + K ++V VG L+ Y G E A+++F
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 200 DELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLN 259
++ +R+ W ++ G G +E++ + +M ++P+ +T+ +L C++ ++
Sbjct: 427 HDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVD 486
Query: 260 EGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLVSV 318
+ +K + + +E ++ +VD G + A + +P+ N I W +L+
Sbjct: 487 QARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGA 546
Query: 319 NA-DNDLLCDALELFTVMQLWGQSPSVRSLV-GLLNSCSRAEEI 360
+ ND L +++L + +V +L+ + C R +++
Sbjct: 547 SRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDL 590
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 269/563 (47%), Gaps = 16/563 (2%)
Query: 144 FSSVLAVCARSG-FHREGVQVHCRVVKFG-FLSNV---------FVGGTLVGFYLNVGLR 192
S +L++C R G F G +H ++K F V V +L+ Y G
Sbjct: 47 MSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKL 106
Query: 193 EVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
A +LFDE+P R++ N++ GF E RM G + T +L VC
Sbjct: 107 VDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVC 165
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISW 312
K + + + G+ + I V N L+ Y CGC V + F+ + NVI+
Sbjct: 166 DTPEFCLVTKMIHALAILSGY-DKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITL 224
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
+++S +N+L D L LF++M+ P+ + + L +CS ++ I G+QIH K
Sbjct: 225 TAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK 284
Query: 373 LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVE 432
G E + +SAL+DMY KC IE + +FES T+ ++ L+ G+ ++ ++
Sbjct: 285 YGI-ESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQ 343
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDA 492
F M+ G+ D S L + S + LH +K G+ V L++
Sbjct: 344 FFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL--GKQLHSLVIKRKFSGNTFVNNGLINM 401
Query: 493 YSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
YS+CG + S +F + N + + SMI +AR+G G L + M +KP ++TF
Sbjct: 402 YSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTF 461
Query: 553 LCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTP 612
L L C+H G++ +GR L + MK VHG++P H++C++D+L RAG P
Sbjct: 462 LSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLP 521
Query: 613 DKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASRE 672
K DC +W +LL +C H + EVG AA+ L + PD + + +N Y+ G + +
Sbjct: 522 LKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAK 581
Query: 673 IREVALARKMTREIGHSSIEIRQ 695
+ A +T+E G SSIEI
Sbjct: 582 TIKRMKAMGVTKETGISSIEIEH 604
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 190/432 (43%), Gaps = 8/432 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQA---LHLYGEMGLLGI 137
N + + K L A+ +F MP+RD ++ N++ + E + L +G G
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF 153
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
+ T VL+VC F +H + G+ + VG L+ Y G R
Sbjct: 154 DHATLTI--VLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
+FD + RN+ ++ G E E+ L +S M V PN VT+ L CS +R
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
+ EG+++ + + K G +ES + + +AL+D YS CG + A FE+ + +S ++
Sbjct: 272 IVEGQQIHALLWKYG-IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 318 VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDE 377
A N +A++ F M G + +L +GLGKQ+H +K F
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKF-S 389
Query: 378 GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLM 437
G+ + LI+MY KC D+ S VF + KR NS++ + + G ++L+ M
Sbjct: 390 GNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449
Query: 438 IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCG 497
+ P +VTF + L A S +LL+ G+E ++D R G
Sbjct: 450 TTLEVKPTDVTFLSLLHACS-HVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508
Query: 498 HVELSLQIFETL 509
++ + ++L
Sbjct: 509 LLKEAKSFIDSL 520
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 162/351 (46%), Gaps = 4/351 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIR 138
N+ I ++ K S VF M R+ +T +IS E L L+ M +
Sbjct: 194 NKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVH 253
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
S T+ S LA C+ S EG Q+H + K+G S + + L+ Y G E A +
Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTI 313
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
F+ E + V+L G + G EE++ ++ RM GVE + +L V L
Sbjct: 314 FESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSL 373
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSV 318
GK+L S ++K F N FV N L++ YS CG L ++ F +P N +SWNS+++
Sbjct: 374 GLGKQLHSLVIKRKF-SGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAA 432
Query: 319 NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG 378
A + AL+L+ M P+ + + LL++CS I G+++ ++ E
Sbjct: 433 FARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEP 492
Query: 379 SVHAQSALIDMYGKCSDIESSVAVFESLT-KRTLECCNSLMTSLSHCGATQ 428
+ +IDM G+ ++ + + +SL K + +L+ + S G T+
Sbjct: 493 RTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 255 bits (651), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 162/560 (28%), Positives = 279/560 (49%), Gaps = 13/560 (2%)
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFY--LNVGLREV 194
I T ++S+L C + G+Q H VVK G ++ VG +L+ Y L G+RE
Sbjct: 57 IPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRET 116
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
R +FD ++ W ++ G+ ++L + M G++ N T +K CS
Sbjct: 117 -RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 175
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
+ G+ ++ GF E N F+++ L Y V A++ F+ +P +VI W +
Sbjct: 176 LGEVRLGRCFHGVVITHGF-EWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTA 234
Query: 315 LVSVNADNDLLCDALELFTVMQLW-GQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL 373
++S + NDL +AL LF M G P + +L +C + GK+IH +
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVEL 433
G V +S+L+DMYGKC + + VF ++K+ ++L+ G + +E+
Sbjct: 295 GIGSNVV-VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEI 353
Query: 434 FGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAY 493
F M ++ D F T LKA + A+ + +H ++ G G+ V +L+D Y
Sbjct: 354 FREMEEK----DLYCFGTVLKACAGLAAVRL--GKEIHGQYVRRGCFGNVIVESALIDLY 407
Query: 494 SRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFL 553
+ G ++ + +++ +S N I + +M++ A+NG G++ ++ + MV+KG+KPD I+F+
Sbjct: 408 GKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFI 467
Query: 554 CALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPD 613
LT C HTGMV EGR F M +G++P H+SCM+DLL RAG +
Sbjct: 468 AILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAEC 527
Query: 614 KRDCFMWSSLLRSCRSHKN-EEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASRE 672
+ D +W LL C ++ + V R A+ ++EL+P ++ SN Y IG +
Sbjct: 528 RNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALN 587
Query: 673 IREVALARKMTREIGHSSIE 692
IR++ + R + + +G S I+
Sbjct: 588 IRKLMVRRGVAKTVGQSWID 607
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 159/330 (48%), Gaps = 15/330 (4%)
Query: 90 SRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGL-LGIRETSTTFSS 146
+R+ A VF MP D + + ++SA+ E+AL L+ M G+ +TF +
Sbjct: 211 NREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGT 270
Query: 147 VLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERN 206
VL C ++G ++H +++ G SNV V +L+ Y G AR++F+ + ++N
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 207 LAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQS 266
W+ LL G+C+ G E+++ + M E + F +LK C+ + GK++
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHG 386
Query: 267 CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLC 326
++ G N+ V +AL+D Y GC+ A + + + + N+I+WN+++S A N
Sbjct: 387 QYVRRGCF-GNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGE 445
Query: 327 DALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHC-HALKLGFDEGSVHAQSA 385
+A+ F M G P S + +L +C + G+ A G G+ H S
Sbjct: 446 EAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEH-YSC 504
Query: 386 LIDMYGKCSDIESSVAVFESLTKRTLECCN 415
+ID+ G+ E + E+L +R EC N
Sbjct: 505 MIDLLGRAGLFEEA----ENLLERA-ECRN 529
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 10/244 (4%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGLLGIRETS 141
+D + K + A VF+ M +++V+++ L+ +C E+A+ ++ EM +
Sbjct: 307 LDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDL 362
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
F +VL CA R G ++H + V+ G NV V L+ Y G + A ++ +
Sbjct: 363 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 422
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+ RN+ WN +L + G EE++++++ M G++P+ ++F +L C + ++EG
Sbjct: 423 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 482
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS-WNSLV---S 317
+ + K ++ + ++D G A+ E N S W L+ +
Sbjct: 483 RNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 542
Query: 318 VNAD 321
NAD
Sbjct: 543 ANAD 546
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 169/605 (27%), Positives = 286/605 (47%), Gaps = 12/605 (1%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGLLGI---RETSTTFSSV 147
L A VF MP RD V + +IS E L +M G + T
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 148 LAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNL 207
C+ G +EG +H VK G S+ FV ++ FY G A F EL + ++
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 208 AVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSC 267
W ++ G +EES + + M G+ P+GV L+ + +GK
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 268 ILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLVSVNADNDLLC 326
+++ F + V N+L+ Y L A+K F I E N +WN+++
Sbjct: 357 VIRHCFSLDST-VCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHV 415
Query: 327 DALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSAL 386
+ELF +Q G S +++SCS + LGK +HC+ +K D ++ ++L
Sbjct: 416 KCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL-TISVVNSL 474
Query: 387 IDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDE 446
ID+YGK D+ + +F + N+++ S HC ++ + LF M+ E P
Sbjct: 475 IDLYGKMGDLTVAWRMFCEADTNVI-TWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 533
Query: 447 VTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIF 506
+T T L A + S Q++H + ++ E + +++ +L+D Y++CGH+E S ++F
Sbjct: 534 ITLVTLLMACVNTGS--LERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF 591
Query: 507 ETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVK 566
+ + +A+C+ MI+GY +G + +A+ M E +KP TFL L+ C H G+V+
Sbjct: 592 DAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVE 651
Query: 567 EGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRS 626
+G+ LF M + V+P+ +H+SC+VDLL R+G P D +W +LL S
Sbjct: 652 QGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSS 710
Query: 627 CRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREI 686
C +H E+G R A+ V DP + ++ +N Y+ G ++ + RE+ + +
Sbjct: 711 CMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRA 770
Query: 687 GHSSI 691
GHS +
Sbjct: 771 GHSVV 775
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 187/422 (44%), Gaps = 16/422 (3%)
Query: 159 EGVQVHCRVVKFGFLS-NVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGF 217
E ++ H ++ G LS N+FV L+ Y + G ++ +F + R++ +WN +++
Sbjct: 41 ESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAH 100
Query: 218 CELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESN 277
G SL ++ M G P+ T ++ C+ + G + +LK G + N
Sbjct: 101 FSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRN 160
Query: 278 IFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQL 337
V + V FYS CG L A F+ +P +V++W +++S + N L M
Sbjct: 161 TAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHS 220
Query: 338 WG---QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
G P+ R+L +CS + G+ +H A+K G S QS++ Y K
Sbjct: 221 AGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGL-ASSKFVQSSMFSFYSKSG 279
Query: 395 DIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL- 453
+ + F L + S++ SL+ G ++ ++F M ++G+ PD V S +
Sbjct: 280 NPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLIN 339
Query: 454 ---KALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS 510
K + V F + HCF+L D+ V SL+ Y + + ++ ++F +S
Sbjct: 340 ELGKMMLVPQGKAFHGFVIRHCFSL------DSTVCNSLLSMYCKFELLSVAEKLFCRIS 393
Query: 511 SP-NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGR 569
N + +M+ GY + + + + + G++ D + ++ C+H G V G+
Sbjct: 394 EEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGK 453
Query: 570 IL 571
L
Sbjct: 454 SL 455
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/610 (27%), Positives = 294/610 (48%), Gaps = 52/610 (8%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAV 150
++ + VF ++ + V+Y +I + +A+ ++ M G++ S S++L++
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
Query: 151 CA-RSG-------FHRE-GVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
A R G + E G Q+HC ++ GF ++ + +L+ Y A +F E
Sbjct: 250 SAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE 309
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+PE N+ WN+++ GF + ++S+ + +RM G +PN VT +L C
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC--------- 360
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
+ G VE+ ++ F +IP +V +WN+++S ++
Sbjct: 361 -------FRSGDVET--------------------GRRIFSSIPQPSVSAWNAMLSGYSN 393
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
+ +A+ F MQ P +L +L+SC+R + GKQIH ++ + S H
Sbjct: 394 YEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS-H 452
Query: 382 AQSALIDMYGKCSDIESSVAVFES-LTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDE 440
S LI +Y +C +E S +F+ + + + C NS+++ H + LF M
Sbjct: 453 IVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQT 512
Query: 441 GLM-PDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHV 499
++ P+E +F+T L S S + + H +KSG D+ V +L D Y +CG +
Sbjct: 513 AVLCPNETSFATVLS--SCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEI 570
Query: 500 ELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGC 559
+ + Q F+ + N + + MI+GY NG G + + + M+ G KPD ITF+ LT C
Sbjct: 571 DSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTAC 630
Query: 560 NHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFM 619
+H+G+V+ G + SM+ +HG++P+ H+ C+VD L RAG TP K +
Sbjct: 631 SHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVL 690
Query: 620 WSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALA 679
W LL SCR H + + R A+ L+ LDP A ++ SN Y+ + +D S ++ +
Sbjct: 691 WEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNK 750
Query: 680 RKMTREIGHS 689
++ + G S
Sbjct: 751 NRVHKTPGQS 760
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/538 (23%), Positives = 239/538 (44%), Gaps = 56/538 (10%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGL 134
VY+ N + K DL A VF MP RD V++N +IS E+AL +Y M
Sbjct: 72 VYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC 131
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG-LRE 193
G + T +SVL+ C++ G++ H VK G N+FVG L+ Y G + +
Sbjct: 132 DGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVD 191
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKV-- 251
+F+ L + N + ++ G V E++ + MC GV+ + V +L +
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 251
Query: 252 ----CSNHRRL--NE-GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
C + + NE GK++ L++GF ++ + N+L++ Y+ + GA+ F +
Sbjct: 252 PREGCDSLSEIYGNELGKQIHCLALRLGF-GGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 305 PVENVISWNSLVSVNADNDLLCD-ALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLG 363
P NV+SWN ++ V + D ++E T M+ G P+ + + +L +C R+
Sbjct: 311 PEVNVVSWNIMI-VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRS------ 363
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH 423
D+E+ +F S+ + ++ N++++ S+
Sbjct: 364 ------------------------------GDVETGRRIFSSIPQPSVSAWNAMLSGYSN 393
Query: 424 CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDA 483
++ + F M + L PD+ T S L S + + +H +++ + ++
Sbjct: 394 YEHYEEAISNFRQMQFQNLKPDKTTLSVILS--SCARLRFLEGGKQIHGVVIRTEISKNS 451
Query: 484 AVACSLMDAYSRCGHVELSLQIFET-LSSPNAICFTSMINGYARNGMGKQGLAVLHAMVE 542
+ L+ YS C +E+S IF+ ++ + C+ SMI+G+ N + + L + M +
Sbjct: 452 HIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 543 KG-LKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
L P+E +F L+ C+ + GR F + G D + + D+ C+ G
Sbjct: 512 TAVLCPNETSFATVLSSCSRLCSLLHGR-QFHGLVVKSGYVSDSFVETALTDMYCKCG 568
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 196/463 (42%), Gaps = 87/463 (18%)
Query: 160 GVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL----------------- 202
G +H +V+ G S+ ++ L+ Y+ G + AR++FDE+
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 203 --------------PERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
PER++ WN ++ G E++L Y RM DG P+ T +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVG-AKKSFEAIPVE 307
L CS G + +K G ++ NIFV NAL+ Y+ CG +V + FE++
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTG-LDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLN------SCSRAEEI- 360
N +S+ +++ A + + +A+++F +M G L +L+ C EI
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 361 --GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLM 418
LGKQIHC AL+LGF G +H ++L+++Y K D+ + +F + + + N ++
Sbjct: 264 GNELGKQIHCLALRLGFG-GDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 419 TSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSG 478
+ VE M D G P+EVT + L A CF
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA----------------CF----- 361
Query: 479 VEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLH 538
R G VE +IF ++ P+ + +M++GY+ ++ ++
Sbjct: 362 ----------------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFR 405
Query: 539 AMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
M + LKPD+ T L+ C ++ G K +HGV
Sbjct: 406 QMQFQNLKPDKTTLSVILSSCARLRFLEGG-------KQIHGV 441
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 174/370 (47%), Gaps = 47/370 (12%)
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACG--------------- 292
LL+ + R GK + I++MG ++S+ ++ N L+D Y CG
Sbjct: 12 LLRCYRDERCKLSGKVIHGFIVRMG-MKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVR 70
Query: 293 ------------CLVG----AKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ 336
C VG A + F+ +P +V+SWN+++SV AL ++ M
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 337 LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
G PS +L +L++CS+ + G + H A+K G D+ ++ +AL+ MY KC I
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDK-NIFVGNALLSMYAKCGFI 189
Query: 397 -ESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
+ V VFESL++ +++ L+ + V++F LM ++G+ D V S L
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL-- 247
Query: 456 LSVSASATFTSS----------QLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQI 505
S+SA S + +HC AL+ G GD + SL++ Y++ + + I
Sbjct: 248 -SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELI 306
Query: 506 FETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMV 565
F + N + + MI G+ + + + L M + G +P+E+T + L C +G V
Sbjct: 307 FAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDV 366
Query: 566 KEGRILFDSM 575
+ GR +F S+
Sbjct: 367 ETGRRIFSSI 376
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 178/625 (28%), Positives = 315/625 (50%), Gaps = 20/625 (3%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETS 141
+ AF KS L+ A VF+ M R+ VT N L+ E+A L+ +M + I +
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSP 308
Query: 142 TTFSSVLAVCARSGFHRE-----GVQVHCRVVKFGFLS-NVFVGGTLVGFYLNVGLREVA 195
++ +L+ E G +VH V+ G + V +G LV Y G A
Sbjct: 309 ESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA 368
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
R +F + +++ WN ++ G + GC E++ Y M + P T L C++
Sbjct: 369 RRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASL 428
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSL 315
+ G+++ LK+G ++ N+ V+NAL+ Y+ G L +K F ++P + +SWNS+
Sbjct: 429 KWAKLGQQIHGESLKLG-IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487
Query: 316 VSVNADNDL-LCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
+ A ++ L +A+ F Q GQ + + +L++ S LGKQIH ALK
Sbjct: 488 IGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNN 547
Query: 375 F-DEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC-NSLMTSLSHCGATQDVVE 432
DE + ++ALI YGKC +++ +F + +R NS+++ H ++
Sbjct: 548 IADEATT--ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALD 605
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDA 492
L M+ G D ++T L A + + AT +H ++++ +E D V +L+D
Sbjct: 606 LVWFMLQTGQRLDSFMYATVLSAFA--SVATLERGMEVHACSVRACLESDVVVGSALVDM 663
Query: 493 YSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKG-LKPDEIT 551
YS+CG ++ +L+ F T+ N+ + SMI+GYAR+G G++ L + M G PD +T
Sbjct: 664 YSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVT 723
Query: 552 FLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQT 611
F+ L+ C+H G+++EG F+SM +G+ P HFSCM D+L RAG +
Sbjct: 724 FVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKM 783
Query: 612 PDKRDCFMWSSLLRSC--RSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDA 669
P K + +W ++L +C + + E+G +AA++L +L+P++ ++ N YA G ++
Sbjct: 784 PMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWED 843
Query: 670 SREIREVALARKMTREIGHSSIEIR 694
+ R+ + +E G+S + ++
Sbjct: 844 LVKARKKMKDADVKKEAGYSWVTMK 868
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 137/574 (23%), Positives = 262/574 (45%), Gaps = 32/574 (5%)
Query: 96 ALAVFHTMPLRDTVTYNLLISAWCFPPEQ--ALHLYGEMGLLGIRETSTTFSS-VLAVCA 152
AL F + ++++V++N +IS + +Q A ++ M G R T TF S V C+
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 153 RSGFH-REGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWN 211
+ R Q+ C + K G L+++FVG LV + G AR++F+++ RN N
Sbjct: 219 LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278
Query: 212 VLLRGFCELGCVEESLNYYSRM-CFDGVEPNGVTFCYLLKVCSNHR-----RLNEGKKLQ 265
L+ G EE+ + M V P ++ LL + L +G+++
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVH 336
Query: 266 SCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLL 325
++ G V+ + + N LV+ Y+ CG + A++ F + ++ +SWNS+++ N
Sbjct: 337 GHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396
Query: 326 CDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSA 385
+A+E + M+ P +L+ L+SC+ + LG+QIH +LKLG D +V +A
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL-NVSVSNA 455
Query: 386 LIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGAT-QDVVELFGLMIDEGLMP 444
L+ +Y + + +F S+ + NS++ +L+ + + V F G
Sbjct: 456 LMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKL 515
Query: 445 DEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQ 504
+ +TFS+ L A+S + + +H ALK+ + +A +L+ Y +CG ++ +
Sbjct: 516 NRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEK 573
Query: 505 IFETLSS-PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG 563
IF ++ + + + SMI+GY N + + L ++ M++ G + D + L+
Sbjct: 574 IFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVA 633
Query: 564 MVKEGRILFDSMKSVHG------VQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDC 617
++ G VH ++ D S +VD+ + G P R+
Sbjct: 634 TLERG-------MEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP-VRNS 685
Query: 618 FMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDP 651
+ W+S++ H E + + + +LD P
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETM-KLDGQTP 718
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 192/424 (45%), Gaps = 15/424 (3%)
Query: 157 HREGVQV-HCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLR 215
HR + H R+ K +V++ L+ YL G AR++FDE+P RN W ++
Sbjct: 16 HRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVS 75
Query: 216 GFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE--GKKLQSCILKMGF 273
G+ G +E+L + M +G+ N F +L+ C + G+++ + K+ +
Sbjct: 76 GYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSY 135
Query: 274 VESNIFVANALVDFYSACGCLVG-AKKSFEAIPVENVISWNSLVSVNADNDLLCDALELF 332
+ V+N L+ Y C VG A +F I V+N +SWNS++SV + A +F
Sbjct: 136 AVDAV-VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIF 194
Query: 333 TVMQLWGQSPSVRSLVGLLNS-CSRAE-EIGLGKQIHCHALKLGFDEGSVHAQSALIDMY 390
+ MQ G P+ + L+ + CS E ++ L +QI C K G + S L+ +
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT-DLFVGSGLVSAF 253
Query: 391 GKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF---GLMIDEGLMPDE- 446
K + + VF + R N LM L ++ +LF MID + P+
Sbjct: 254 AKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID--VSPESY 311
Query: 447 VTFSTTLKALSVSASATFTSSQLLHCFALKSG-VEGDAAVACSLMDAYSRCGHVELSLQI 505
V ++ S++ + +H + +G V+ + L++ Y++CG + + ++
Sbjct: 312 VILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371
Query: 506 FETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMV 565
F ++ +++ + SMI G +NG + + +M + P T + +L+ C
Sbjct: 372 FYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 566 KEGR 569
K G+
Sbjct: 432 KLGQ 435
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 178/388 (45%), Gaps = 19/388 (4%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW----CFPPEQALHLYGEMGLLG 136
N ++ + K + A VF+ M +D+V++N +I+ CF +A+ Y M
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFI--EAVERYKSMRRHD 410
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
I S T S L+ CA + + G Q+H +K G NV V L+ Y G R
Sbjct: 411 ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECR 470
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCF-----DGVEPNGVTFCYLLKV 251
++F +PE + WN ++ L E SL + +CF G + N +TF +L
Sbjct: 471 KIFSSMPEHDQVSWNSIIGA---LARSERSLP-EAVVCFLNAQRAGQKLNRITFSSVLSA 526
Query: 252 CSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV-ENVI 310
S+ GK++ LK + NAL+ Y CG + G +K F + + +
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEAT-TENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 311 SWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
+WNS++S N+LL AL+L M GQ +L++ + + G ++H +
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACS 645
Query: 371 LKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
++ E V SAL+DMY KC ++ ++ F ++ R NS+++ + G ++
Sbjct: 646 VRACL-ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 704
Query: 431 VELFGLM-IDEGLMPDEVTFSTTLKALS 457
++LF M +D PD VTF L A S
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACS 732
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 466 SSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYA 525
+++ H K+ ++ D + +L++AY G + ++F+ + N + + +++GY+
Sbjct: 19 AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYS 78
Query: 526 RNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
RNG K+ L L MV++G+ ++ F+ L C G V ILF + +HG+
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVG---ILFG--RQIHGL 129
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/481 (29%), Positives = 255/481 (53%), Gaps = 9/481 (1%)
Query: 217 FCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVES 276
C G ++E+L M G E + LL C + R L +G+++ + ++K ++ +
Sbjct: 30 LCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPA 86
Query: 277 NIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ 336
++ L+ FY C CL A+K + +P +NV+SW +++S + +AL +F M
Sbjct: 87 T-YLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMM 145
Query: 337 LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
P+ + +L SC RA +GLGKQIH +K +D + S+L+DMY K I
Sbjct: 146 RSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS-HIFVGSSLLDMYAKAGQI 204
Query: 397 ESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKAL 456
+ + +FE L +R + C +++ + G ++ +E+F + EG+ P+ VT+++ L AL
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Query: 457 SVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAIC 516
S A + HC L+ + A + SL+D YS+CG++ + ++F+ + AI
Sbjct: 265 S--GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 322
Query: 517 FTSMINGYARNGMGKQGLAVLHAMV-EKGLKPDEITFLCALTGCNHTGMVKEGRILFDSM 575
+ +M+ GY+++G+G++ L + M EK +KPD +T L L+GC+H M G +FD M
Sbjct: 323 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGM 382
Query: 576 -KSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEE 634
+G +P H+ C+VD+L RAG + P K + SLL +CR H + +
Sbjct: 383 VAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVD 442
Query: 635 VGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
+G + L+E++P++ ++ SN YA G + +R + + + +T+E G S I+
Sbjct: 443 IGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHE 502
Query: 695 Q 695
Q
Sbjct: 503 Q 503
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 195/393 (49%), Gaps = 4/393 (1%)
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
EM +LG + ++L C R+G +VH ++K +L ++ L+ FY
Sbjct: 42 EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
E AR++ DE+PE+N+ W ++ + + G E+L ++ M +PN TF +L
Sbjct: 102 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLT 161
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVI 310
C L GK++ I+K + +S+IFV ++L+D Y+ G + A++ FE +P +V+
Sbjct: 162 SCIRASGLGLGKQIHGLIVKWNY-DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVV 220
Query: 311 SWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
S ++++ A L +ALE+F + G SP+ + LL + S + GKQ HCH
Sbjct: 221 SCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHV 280
Query: 371 LKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
L+ +V Q++LIDMY KC ++ + +F+++ +RT N+++ S G ++V
Sbjct: 281 LRRELPFYAV-LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Query: 431 VELFGLMIDEG-LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSL 489
+ELF LM DE + PD VT L S + A + G + +
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Query: 490 MDAYSRCGHVELSLQIFETL-SSPNAICFTSMI 521
+D R G ++ + + + + S P A S++
Sbjct: 400 VDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLL 432
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 183/363 (50%), Gaps = 10/363 (2%)
Query: 62 IRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP 121
+ A T P+ Y + R + + K L A V MP ++ V++ +IS +
Sbjct: 74 VHAHMIKTRYLPA--TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 122 --PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVG 179
+AL ++ EM + TF++VL C R+ G Q+H +VK+ + S++FVG
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVG 191
Query: 180 GTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE 239
+L+ Y G + ARE+F+ LPER++ ++ G+ +LG EE+L + R+ +G+
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251
Query: 240 PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKK 299
PN VT+ LL S L+ GK+ +L+ + + N+L+D YS CG L A++
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV-LQNSLIDMYSKCGNLSYARR 310
Query: 300 SFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ-SPSVRSLVGLLNSCS--R 356
F+ +P ISWN+++ + + L + LELF +M+ + P +L+ +L+ CS R
Sbjct: 311 LFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGR 370
Query: 357 AEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESL-TKRTLECCN 415
E+ GL A + G G+ H ++DM G+ I+ + + + +K T
Sbjct: 371 MEDTGLNIFDGMVAGEYGTKPGTEH-YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLG 429
Query: 416 SLM 418
SL+
Sbjct: 430 SLL 432
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 253 bits (645), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 156/551 (28%), Positives = 271/551 (49%), Gaps = 35/551 (6%)
Query: 175 NVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC 234
N+F L+ Y GL F++LP+R+ WNVL+ G+ G V ++ Y+ M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 235 FD-GVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGC 293
D VT +LK+ S++ ++ GK++ ++K+GF ES + V + L+ Y+ GC
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGF-ESYLLVGSPLLYMYANVGC 189
Query: 294 LVGAKKSFEAIPVENVI------------------------------SWNSLVSVNADND 323
+ AKK F + N + SW +++ A N
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 324 LLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ 383
L +A+E F M++ G +L +C I GKQIH ++ F + ++
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQD-HIYVG 308
Query: 384 SALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLM 443
SALIDMY KC + + VF+ + ++ + +++ G ++ V++F M G+
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 444 PDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSL 503
PD T + A + + S+ SQ H A+ SG+ V+ SL+ Y +CG ++ S
Sbjct: 369 PDHYTLGQAISACA-NVSSLEEGSQF-HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 504 QIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG 563
++F ++ +A+ +T+M++ YA+ G + + + MV+ GLKPD +T ++ C+ G
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 564 MVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSL 623
+V++G+ F M S +G+ P H+SCM+DL R+G P D W++L
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 624 LRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMT 683
L +CR+ N E+G AA+ L+ELDP PA + S+ YA G +D+ ++R + +
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606
Query: 684 REIGHSSIEIR 694
+E G S I+ +
Sbjct: 607 KEPGQSWIKWK 617
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 238/510 (46%), Gaps = 45/510 (8%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHL 128
R P +++ N + A+ K+ ++ + F +P RD VT+N+LI + A+
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 129 YGEMGLLGIRE-----TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV 183
Y M +R+ T T ++L + + +G G Q+H +V+K GF S + VG L+
Sbjct: 126 YNTM----MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL 181
Query: 184 GFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFD------- 236
Y NVG A+++F L +RN ++N L+ G G +E++L + M D
Sbjct: 182 YMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAM 241
Query: 237 --GVEPNGVT---------------------FCYLLKVCSNHRRLNEGKKLQSCILKMGF 273
G+ NG+ F +L C +NEGK++ +CI++ F
Sbjct: 242 IKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF 301
Query: 274 VESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFT 333
+ +I+V +AL+D Y C CL AK F+ + +NV+SW ++V +A+++F
Sbjct: 302 -QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 334 VMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKC 393
MQ G P +L +++C+ + G Q H A+ G V ++L+ +YGKC
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH-YVTVSNSLVTLYGKC 419
Query: 394 SDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL 453
DI+ S +F + R +++++ + G + ++LF M+ GL PD VT + +
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 454 KALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SP 512
A S A + + G+ ++D +SR G +E +++ + P
Sbjct: 480 SACS-RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPP 538
Query: 513 NAICFTSMINGYARNGMGKQGLAVLHAMVE 542
+AI +T++++ G + G +++E
Sbjct: 539 DAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 151/379 (39%), Gaps = 76/379 (20%)
Query: 261 GKKLQSCILKMGFVESNI---------FVANALVDFYSACGCLVGAKKSFEAIPVENVIS 311
G + QS +KM + NI F+ N +V Y+ A++ F+ IP N+ S
Sbjct: 17 GARNQSRYVKM--IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFS 74
Query: 312 WNSLVSVNADNDLLCDALELF--------------------------------TVMQLWG 339
WN+L+ + L+ + F T+M+ +
Sbjct: 75 WNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFS 134
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
+ + +L+ +L S + LGKQIH +KLGF E + S L+ MY I +
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGF-ESYLLVGSPLLYMYANVGCISDA 193
Query: 400 VAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF-GLMID------------------- 439
VF L R NSLM L CG +D ++LF G+ D
Sbjct: 194 KKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKE 253
Query: 440 ----------EGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSL 489
+GL D+ F + L A + +H +++ + V +L
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPA--CGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 490 MDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDE 549
+D Y +C + + +F+ + N + +T+M+ GY + G ++ + + M G+ PD
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 550 ITFLCALTGCNHTGMVKEG 568
T A++ C + ++EG
Sbjct: 372 YTLGQAISACANVSSLEEG 390
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/556 (29%), Positives = 287/556 (51%), Gaps = 12/556 (2%)
Query: 146 SVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGT-LVGFYLNVGLREVARELFDELPE 204
+ L CA+ + G Q+H +V+ GFL + GT LV Y GL A +F E
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 205 RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKL 264
R++ +N L+ GF G +++ Y M +G+ P+ TF LLK S+ L++ KK+
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLK-GSDAMELSDVKKV 182
Query: 265 QSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP-VENVISWNSLVSVNADND 323
K+GF +S+ +V + LV YS + A+K F+ +P ++ + WN+LV+ +
Sbjct: 183 HGLAFKLGF-DSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIF 241
Query: 324 LLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ 383
DAL +F+ M+ G S ++ +L++ + + +I G+ IH A+K G V
Sbjct: 242 RFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIV-VS 300
Query: 384 SALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLM 443
+ALIDMYGK +E + ++FE++ +R L NS++ +CG + LF M+ G+
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 444 PDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGV----EGDAAVACSLMDAYSRCGHV 499
PD VT +T L + A+ + +H + + SG+ + + SLMD Y +CG +
Sbjct: 361 PDIVTLTTVLP--TCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDL 418
Query: 500 ELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGC 559
+ +F+++ ++ + MINGY G+ L + M G+KPDEITF+ L C
Sbjct: 419 RDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQAC 478
Query: 560 NHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFM 619
+H+G + EGR M++V+ + P H++C++D+L RA P + +
Sbjct: 479 SHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVV 538
Query: 620 WSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALA 679
W S+L SCR H N+++ A + L EL+P+ ++ SN Y E G ++ ++R+
Sbjct: 539 WRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQ 598
Query: 680 RKMTREIGHSSIEIRQ 695
+ + + G S I ++
Sbjct: 599 QNVKKTPGCSWIVLKN 614
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 160/334 (47%), Gaps = 11/334 (3%)
Query: 74 SDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRD-TVTYNLLISAW--CFPPEQALHLYG 130
SDC Y + + ++ K + A VF +P RD +V +N L++ + F E AL ++
Sbjct: 193 SDC-YVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFS 251
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
+M G+ + T +SVL+ SG G +H VK G S++ V L+ Y
Sbjct: 252 KMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSK 311
Query: 191 LREVARELFDELPERNLAVWNVLL--RGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
E A +F+ + ER+L WN +L +C G + +L + RM G+ P+ VT +
Sbjct: 312 WLEEANSIFEAMDERDLFTWNSVLCVHDYC--GDHDGTLALFERMLCSGIRPDIVTLTTV 369
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVE---SNIFVANALVDFYSACGCLVGAKKSFEAIP 305
L C L +G+++ ++ G + SN F+ N+L+D Y CG L A+ F+++
Sbjct: 370 LPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR 429
Query: 306 VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ 365
V++ SWN +++ AL++F+ M G P + VGLL +CS + + G+
Sbjct: 430 VKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRN 489
Query: 366 IHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
+ + + +IDM G+ +E +
Sbjct: 490 FLAQMETVYNILPTSDHYACVIDMLGRADKLEEA 523
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 15/351 (4%)
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCY-LLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
G +EE+ Y E + V C L+ C+ + G+++ +++ GF++ +
Sbjct: 46 GQIEENPKRY--------EHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPR 97
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
+LV+ Y+ CG + A F +V +N+L+S N DA+E + M+ G
Sbjct: 98 AGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANG 156
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
P + LL S A E+ K++H A KLGFD + S L+ Y K +E +
Sbjct: 157 ILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDS-DCYVGSGLVTSYSKFMSVEDA 214
Query: 400 VAVFESLTKRTLECC-NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSV 458
VF+ L R N+L+ S +D + +F M +EG+ T ++ L A +V
Sbjct: 215 QKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTV 274
Query: 459 SASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFT 518
S + + +H A+K+G D V+ +L+D Y + +E + IFE + + +
Sbjct: 275 SGD--IDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWN 332
Query: 519 SMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGR 569
S++ + G LA+ M+ G++PD +T L C +++GR
Sbjct: 333 SVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGR 383
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 141/289 (48%), Gaps = 19/289 (6%)
Query: 343 SVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAV 402
+V + + L C++ ++ G+QIH ++ GF + S A ++L++MY KC + +V V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 403 FESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASA 462
F ++R + N+L++ G+ D +E + M G++PD+ TF + LK S +
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG---SDAM 174
Query: 463 TFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS-PNAICFTSMI 521
+ + +H A K G + D V L+ +YS+ VE + ++F+ L +++ + +++
Sbjct: 175 ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALV 234
Query: 522 NGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
NGY++ + L V M E+G+ T L+ +G + GR S+HG+
Sbjct: 235 NGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGR-------SIHGL 287
Query: 582 Q------PDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
D + ++D+ ++ + D+RD F W+S+L
Sbjct: 288 AVKTGSGSDIVVSNALIDMYGKS-KWLEEANSIFEAMDERDLFTWNSVL 335
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/630 (26%), Positives = 299/630 (47%), Gaps = 101/630 (16%)
Query: 163 VHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGC 222
VHCRV+K G + +V++ L+ Y G AR+LFDE+P R WN +L + + G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 223 VEESLNYYSR-------------------------------MCFDGVEPNGVTFCYLLKV 251
++ + ++ + M +G+EP T +L
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 252 CSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS 311
+ R + GKK+ S I+K+G + N+ V+N+L++ Y+ CG + AK F+ + V ++ S
Sbjct: 156 VAATRCMETGKKVHSFIVKLG-LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISS 214
Query: 312 WNSLVSVN----------------ADNDLLC---------------DALELFTVMQLWGQ 340
WN++++++ A+ D++ AL++F+ M
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 274
Query: 341 -SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
SP +L +L++C+ E++ +GKQIH H + GFD + +ALI MY +C +E++
Sbjct: 275 LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI-VLNALISMYSRCGGVETA 333
Query: 400 ---------------------------------VAVFESLTKRTLECCNSLMTSLSHCGA 426
+F SL R + +++ G+
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 427 TQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVA 486
+ + LF M+ G P+ T + S+ A+ + + +H A+KSG +V+
Sbjct: 394 YGEAINLFRSMVGGGQRPNSYTLAAM--LSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 487 CSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGL 545
+L+ Y++ G++ + + F+ + + + +TSMI A++G ++ L + M+ +GL
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 546 KPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXX 605
+PD IT++ + C H G+V +GR FD MK V + P H++CMVDL RAG
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 606 XXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIG 665
+ P + D W SLL +CR HKN ++G AA+ L+ L+P++ + +N Y+ G
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 666 NFDASREIREVALARKMTREIGHSSIEIRQ 695
++ + +IR+ ++ +E G S IE++
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 160/558 (28%), Positives = 278/558 (49%), Gaps = 12/558 (2%)
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
TF +LA + G QVHC +K G + V +L+ Y + AR +FD
Sbjct: 316 VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDN 375
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+ ER+L WN ++ G + G E++ + ++ G++P+ T +LK S+ L EG
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEG 432
Query: 262 ----KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
K++ +K+ V S+ FV+ AL+D YS C+ A+ FE + +++WN++++
Sbjct: 433 LSLSKQVHVHAIKINNV-SDSFVSTALIDAYSRNRCMKEAEILFERHNFD-LVAWNAMMA 490
Query: 318 VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDE 377
+ L+LF +M G+ +L + +C I GKQ+H +A+K G+D
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 378 GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLM 437
+ S ++DMY KC D+ ++ F+S+ ++++ G + +F M
Sbjct: 551 -DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
Query: 438 IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCG 497
G++PDE T +T KA S + +H ALK D V SL+D Y++CG
Sbjct: 610 RLMGVLPDEFTIATLAKA--SSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCG 667
Query: 498 HVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALT 557
++ + +F+ + N + +M+ G A++G GK+ L + M G+KPD++TF+ L+
Sbjct: 668 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Query: 558 GCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDC 617
C+H+G+V E SM +G++P+ H+SC+ D L RAG +
Sbjct: 728 ACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASA 787
Query: 618 FMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVA 677
M+ +LL +CR + E G R A L+EL+P D + ++ SN YA +D + R +
Sbjct: 788 SMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMM 847
Query: 678 LARKMTREIGHSSIEIRQ 695
K+ ++ G S IE++
Sbjct: 848 KGHKVKKDPGFSWIEVKN 865
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/591 (24%), Positives = 263/591 (44%), Gaps = 52/591 (8%)
Query: 64 AQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE 123
A+ T NP + N I + K L A VF MP RD V++N +++A+ E
Sbjct: 63 ARILTFEENPER--FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSE 120
Query: 124 -------QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNV 176
QA L+ + + + T S +L +C SG+ H K G +
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180
Query: 177 FVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFD 236
FV G LV YL G + + LF+E+P R++ +WN++L+ + E+G EE+++ S
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 237 GVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVG 296
G+ PN +T L ++ + + K + S I N + Y G
Sbjct: 241 GLNPNEITLRLLARISGDDSDAGQVKSFANG--NDASSVSEIIFRNKGLSEYLHSGQYSA 298
Query: 297 AKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSR 356
K F + ++D+ CD + + + +L + +
Sbjct: 299 LLKCFADM---------------VESDVECDQV----------------TFILMLATAVK 327
Query: 357 AEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNS 416
+ + LG+Q+HC ALKLG D + ++LI+MY K + VF+++++R L NS
Sbjct: 328 VDSLALGQQVHCMALKLGLDL-MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
++ ++ G + V LF ++ GL PD+ T ++ LKA S S + S+ +H A+K
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS-SLPEGLSLSKQVHVHAIK 445
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAV 536
D+ V+ +L+DAYSR ++ + +FE + + + + +M+ GY ++ G + L +
Sbjct: 446 INNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKL 504
Query: 537 LHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFD-SMKSVHGVQPDQRHFSCMVDLL 595
M ++G + D+ T C + +G+ + ++KS G D S ++D+
Sbjct: 505 FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS--GYDLDLWVSSGILDMY 562
Query: 596 CRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVEL 646
+ G P D W++++ C + EE RA V ++
Sbjct: 563 VKCGDMSAAQFAFDSIPVPDDV-AWTTMISGCIENGEEE---RAFHVFSQM 609
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 157/329 (47%), Gaps = 10/329 (3%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETS 141
IDA+ ++R + A +F D V +N +++ + + + L L+ M G R
Sbjct: 459 IDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD 517
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
T ++V C +G QVH +K G+ +++V ++ Y+ G A+ FD
Sbjct: 518 FTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+P + W ++ G E G E + + +S+M GV P+ T L K S L +G
Sbjct: 578 IPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
+++ + LK+ ++ FV +LVD Y+ CG + A F+ I + N+ +WN+++ A
Sbjct: 638 RQIHANALKLN-CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQ 696
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG--- 378
+ + L+LF M+ G P + +G+L++CS + GL + + H + D G
Sbjct: 697 HGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS---GLVSEAYKHMRSMHGDYGIKP 753
Query: 379 SVHAQSALIDMYGKCSDIESSVAVFESLT 407
+ S L D G+ ++ + + ES++
Sbjct: 754 EIEHYSCLADALGRAGLVKQAENLIESMS 782
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 176/403 (43%), Gaps = 43/403 (10%)
Query: 164 HCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGF-----C 218
H R++ F F+ L+ Y G AR +FD++P+R+L WN +L + C
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 219 ELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNI 278
+ ++++ + + D V + +T +LK+C + + + K+G ++ +
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG-LDGDE 180
Query: 279 FVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLW 338
FVA ALV+ Y G + K FE +P +V+ WN ++ + +A++L +
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 339 GQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIES 398
G +P+ +L L + G K + G D SV
Sbjct: 241 GLNPNEITLRLLARISGDDSDAGQVK-----SFANGNDASSV------------------ 277
Query: 399 SVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK-ALS 457
S +F N ++ H G +++ F M++ + D+VTF L A+
Sbjct: 278 SEIIFR----------NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVK 327
Query: 458 VSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICF 517
V + A Q +HC ALK G++ V+ SL++ Y + + +F+ +S + I +
Sbjct: 328 VDSLAL---GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISW 384
Query: 518 TSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCN 560
S+I G A+NG+ + + + ++ GLKPD+ T L +
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP---PEQALHLYGEMGLLGIRET 140
+D ++K D+++A F ++P+ D V + +IS C E+A H++ +M L+G+
Sbjct: 559 LDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG-CIENGEEERAFHVFSQMRLMGVLPD 617
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD 200
T +++ + +G Q+H +K ++ FVG +LV Y G + A LF
Sbjct: 618 EFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFK 677
Query: 201 ELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE 260
+ N+ WN +L G + G +E+L + +M G++P+ VTF +L CS+ ++E
Sbjct: 678 RIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSE 737
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
K + ++ I + L D G + A+ E++ +E
Sbjct: 738 AYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSME 784
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 349 GLLNSCSRAEEIGLGKQIHC-HALKLGFDEGSVH-AQSALIDMYGKCSDIESSVAVFESL 406
G L + + ++ LGK C HA L F+E + LI MY KC + + VF+ +
Sbjct: 44 GFLRNAITSSDLMLGK---CTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 407 TKRTLECCNSLMTSLSHCGA-----TQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSAS 461
R L NS++ + + Q LF ++ + + +T S LK S
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKL--CLHS 158
Query: 462 ATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMI 521
+S+ H +A K G++GD VA +L++ Y + G V+ +FE + + + + M+
Sbjct: 159 GYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLML 218
Query: 522 NGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
Y G ++ + + A GL P+EIT
Sbjct: 219 KAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/493 (30%), Positives = 251/493 (50%), Gaps = 13/493 (2%)
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
WN ++ G E+L +S M + P +F +K CS+ + GK+
Sbjct: 44 WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
G+ +S+IFV++AL+ YS CG L A+K F+ IP N++SW S++ N DA+
Sbjct: 104 VFGY-QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAV 162
Query: 330 ELFTVMQLWGQSPS------VRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ 383
LF + + LV ++++CSR GL + IH +K GFD G V
Sbjct: 163 SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG-VSVG 221
Query: 384 SALIDMYGKCSDIESSVA--VFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
+ L+D Y K + +VA +F+ + + NS+M+ + G + + E+F ++
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNK 281
Query: 442 LMP-DEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE 500
++ + +T ST L L+VS S + +H ++ G+E D V S++D Y +CG VE
Sbjct: 282 VVTFNAITLSTVL--LAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 501 LSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCN 560
+ + F+ + + N +T+MI GY +G + L + AM++ G++P+ ITF+ L C+
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 561 HTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMW 620
H G+ EG F++MK GV+P H+ CMVDLL RAG + K D +W
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 621 SSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALAR 680
SSLL +CR HKN E+ + L ELD + ++ S+ YA+ G + +R + R
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 681 KMTREIGHSSIEI 693
+ + G S +E+
Sbjct: 520 GLVKPPGFSLLEL 532
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 208/427 (48%), Gaps = 15/427 (3%)
Query: 107 DTVTYNLLIS--AWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVH 164
D ++N +I+ A +AL + M L + T ++F + C+ G Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 165 CRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVE 224
+ FG+ S++FV L+ Y G E AR++FDE+P+RN+ W ++RG+ G
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 225 ESLNYYSRMCFDGVEPNGVTF------CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNI 278
++++ + + D + + F ++ CS + + S ++K GF + +
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF-DRGV 218
Query: 279 FVANALVDFYSAC--GCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELF-TVM 335
V N L+D Y+ G + A+K F+ I ++ +S+NS++SV A + + +A E+F ++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD 395
+ + + +L +L + S + + +GK IH +++G E V +++IDMY KC
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL-EDDVIVGTSIIDMYCKCGR 337
Query: 396 IESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
+E++ F+ + + + +++ G +ELF MID G+ P+ +TF + L A
Sbjct: 338 VETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397
Query: 456 LSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNA 514
S A + + + GVE ++D R G ++ + + + + P++
Sbjct: 398 CS-HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDS 456
Query: 515 ICFTSMI 521
I ++S++
Sbjct: 457 IIWSSLL 463
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 153/300 (51%), Gaps = 11/300 (3%)
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
+V SWNS+++ A + +AL F+ M+ P+ S + +CS +I GKQ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 368 CHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGAT 427
A G+ + + SALI MY C +E + VF+ + KR + S++ G
Sbjct: 100 QQAFVFGY-QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 428 QDVVELF-GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLL----HCFALKSGVEGD 482
D V LF L++DE D+ F ++ +SV ++ + ++ L H F +K G +
Sbjct: 159 LDAVSLFKDLLVDEN-DDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217
Query: 483 AAVACSLMDAYSRCGH--VELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAM 540
+V +L+DAY++ G V ++ +IF+ + + + + S+++ YA++GM + V +
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 541 VE-KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
V+ K + + IT L +H+G ++ G+ + D + + G++ D + ++D+ C+ G
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTSIIDMYCKCG 336
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 14/251 (5%)
Query: 77 VYTKNREIDAFIKSRDLNSALA--VFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEM 132
V N +DA+ K + A+A +F + +D V+YN ++S + +A ++ +
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 133 GLLGIRETSTTF-----SSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL 187
++ TF S+VL + SG R G +H +V++ G +V VG +++ Y
Sbjct: 278 ----VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 188 NVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCY 247
G E AR+ FD + +N+ W ++ G+ G ++L + M GV PN +TF
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
+L CS+ EG + + + VE + +VD G L A + + ++
Sbjct: 394 VLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMK 453
Query: 308 -NVISWNSLVS 317
+ I W+SL++
Sbjct: 454 PDSIIWSSLLA 464
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 162/606 (26%), Positives = 302/606 (49%), Gaps = 17/606 (2%)
Query: 99 VFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAVCARSGF 156
VF M ++ V +N LIS + +A +G M + ++ + +F +V + S
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 157 HREGVQVHCRVVKFG--FLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLL 214
++ + ++K G ++ ++FV + + Y +G E +R +FD ERN+ VWN ++
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 215 RGFCELGCVEESLNYY-SRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGF 273
+ + C+ ES+ + + + + VT+ S +++ G++ + K F
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK-NF 348
Query: 274 VESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFT 333
E I + N+L+ YS CG + + F ++ +V+SWN+++S N L + L L
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 334 VMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD-EGSVHAQSALIDMYGK 392
MQ G ++ LL++ S +GKQ H ++ G EG S LIDMY K
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG---MNSYLIDMYSK 465
Query: 393 CSDIESSVAVFES--LTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFS 450
I S +FE +R NS+++ + G T+ +F M+++ + P+ VT +
Sbjct: 466 SGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVA 525
Query: 451 TTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS 510
+ L A S S + LH F+++ ++ + VA +L+D YS+ G ++ + +F
Sbjct: 526 SILPACSQIGSVDL--GKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 511 SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRI 570
N++ +T+MI GY ++GMG++ +++ +M E G+KPD ITF+ L+ C+++G++ EG
Sbjct: 584 ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLK 643
Query: 571 LFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCF-MWSSLLRSCRS 629
+F+ M+ V+ +QP H+ C+ D+L R G ++ + +W SLL SC+
Sbjct: 644 IFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKL 703
Query: 630 HKNEEVGTRAAQVLVELDPDD--PAVWLQASNFYAEIGNFDASREIREVALARKMTREIG 687
H E+ ++ L + D + SN YAE + + ++R + + +E+G
Sbjct: 704 HGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVG 763
Query: 688 HSSIEI 693
S IEI
Sbjct: 764 RSGIEI 769
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 158/627 (25%), Positives = 287/627 (45%), Gaps = 67/627 (10%)
Query: 51 QQRHQSLSFSFIRAQTTTTPRNPSDCVYTKNREIDAFIKSR------DLNSALA--VFHT 102
Q RH S +FS T TP+ PS I+SR D N LA +F
Sbjct: 23 QTRHSS-TFS----PPTLTPQTPS-------------IRSRLSKICQDGNPQLARQLFDA 64
Query: 103 MPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRET--STTFSSVLAVCARSGFHR 158
+P TV +N +I + P +AL Y M + T+SS L CA + +
Sbjct: 65 IPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLK 124
Query: 159 EGVQVHCRVVKFGFLSNVFVGGTLVGFY---LNVG---LREVARELFDELPERNLAVWNV 212
G VHC +++ S+ V +L+ Y LN +V R++FD + +N+ WN
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNT 184
Query: 213 LLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMG 272
L+ + + G E+ + M V+P+ V+F + S R + + +LK+G
Sbjct: 185 LISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLG 244
Query: 273 --FVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALE 330
+V+ ++FV ++ + Y+ G + +++ F++ N+ WN+++ V ND L +++E
Sbjct: 245 DEYVK-DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIE 303
Query: 331 LFTVMQLWGQSPSVRSLVGLL---NSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALI 387
LF ++ G V V L ++ S +++ LG+Q H K F E + ++L+
Sbjct: 304 LF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK-NFRELPIVIVNSLM 360
Query: 388 DMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEV 447
MY +C + S VF S+ +R + N+++++ G + + L M +G D +
Sbjct: 361 VMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYI 420
Query: 448 TFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFE 507
T + L A S + + H F ++ G++ + + L+D YS+ G + +S ++FE
Sbjct: 421 TVTALLSAASNLRNKEI--GKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFE 477
Query: 508 --TLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMV 565
+ + + SMI+GY +NG ++ V M+E+ ++P+ +T L C+ G V
Sbjct: 478 GSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSV 537
Query: 566 KEGRILFDSMKSVHGVQP----DQRHF--SCMVDLLCRAGXXXXXXXXXXQTPDKRDCFM 619
G K +HG DQ F S +VD+ +AG QT + R+
Sbjct: 538 DLG-------KQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE-RNSVT 589
Query: 620 WSSLLRSCRSHKNEEVGTRAAQVLVEL 646
+++++ H +G RA + + +
Sbjct: 590 YTTMILGYGQHG---MGERAISLFLSM 613
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 243/446 (54%), Gaps = 5/446 (1%)
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
LLK C+ + L +G+ + + IL+ F +I + N L++ Y+ CG L A+K FE +P
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQSIF-RHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
+ ++W +L+S + +D CDAL F M +G SP+ +L ++ + + G Q+H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 368 CHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGAT 427
+K GFD +VH SAL+D+Y + ++ + VF++L R N+L+ + T
Sbjct: 185 GFCVKCGFD-SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVAC 487
+ +ELF M+ +G P ++++ A S++ + +H + +KSG + A
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGA--CSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 488 SLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKP 547
+L+D Y++ G + + +IF+ L+ + + + S++ YA++G GK+ + M G++P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 548 DEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXX 607
+EI+FL LT C+H+G++ EG ++ MK G+ P+ H+ +VDLL RAG
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 608 XXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNF 667
+ P + +W +LL +CR HKN E+G AA+ + ELDPDDP + N YA G +
Sbjct: 421 IEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRW 480
Query: 668 DASREIREVALARKMTREIGHSSIEI 693
+ + +R+ + +E S +EI
Sbjct: 481 NDAARVRKKMKESGVKKEPACSWVEI 506
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 194/383 (50%), Gaps = 9/383 (2%)
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
++++L C +G VH +++ F ++ +G TL+ Y G E AR++F+++P
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKK 263
+R+ W L+ G+ + ++L ++++M G PN T ++K + RR G +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 264 LQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADND 323
L +K GF +SN+ V +AL+D Y+ G + A+ F+A+ N +SWN+L++ +A
Sbjct: 183 LHGFCVKCGF-DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 324 LLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ 383
ALELF M G PS S L +CS + GK +H + +K G ++ A
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG-EKLVAFAG 300
Query: 384 SALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLM 443
+ L+DMY K I + +F+ L KR + NSL+T+ + G ++ V F M G+
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIR 360
Query: 444 PDEVTFSTTLKALSVSASATFTSSQLLHCFAL--KSGVEGDAAVACSLMDAYSRCGHVEL 501
P+E++F + L A S S + H + L K G+ +A +++D R G +
Sbjct: 361 PNEISFLSVLTACSHSG----LLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 502 SLQIFETLS-SPNAICFTSMING 523
+L+ E + P A + +++N
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNA 439
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 156/328 (47%), Gaps = 4/328 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIR 138
N ++ + K L A VF MP RD VT+ LIS + P AL + +M G
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
T SSV+ A G Q+H VK GF SNV VG L+ Y GL + A+ +
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
FD L RN WN L+ G E++L + M DG P+ ++ L CS+ L
Sbjct: 219 FDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFL 278
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSV 318
+GK + + ++K G + F N L+D Y+ G + A+K F+ + +V+SWNSL++
Sbjct: 279 EQGKWVHAYMIKSG-EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 319 NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG 378
A + +A+ F M+ G P+ S + +L +CS + + G + K G
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE 397
Query: 379 SVHAQSALIDMYGKCSDIESSVAVFESL 406
+ H + ++D+ G+ D+ ++ E +
Sbjct: 398 AWHYVT-VVDLLGRAGDLNRALRFIEEM 424
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 122/238 (51%), Gaps = 6/238 (2%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLIS--AWCFPPEQALHLYGEMGLLGIRETS 141
+D + + ++ A VF + R+ V++N LI+ A E+AL L+ M G R +
Sbjct: 203 LDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
+++S+ C+ +GF +G VH ++K G F G TL+ Y G AR++FD
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
L +R++ WN LL + + G +E++ ++ M G+ PN ++F +L CS+ L+EG
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Query: 262 KKLQSCILKMGFV-ESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS-WNSLVS 317
+ K G V E+ +V +VD G L A + E +P+E + W +L++
Sbjct: 383 WHYYELMKKDGIVPEAWHYV--TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLN 438
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/533 (29%), Positives = 281/533 (52%), Gaps = 28/533 (5%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCEL- 220
Q H +VK G +++F+ L+ Y + + A +LFDE+P RN+ WN+L+ G +
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRD 116
Query: 221 GCVEESLN----YYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVES 276
G + Y SR+ F V + V+F L+++C++ + G +L ++K G +ES
Sbjct: 117 GDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQG-LES 175
Query: 277 NIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ 336
+ F + +LV FY CG +V A++ FEA+ +++ WN+LVS N ++ +A F +++
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEA---FGLLK 232
Query: 337 LWGQSPS-----VRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYG 391
L G + + LL++C R E+ GKQIH K+ + + + +AL++MY
Sbjct: 233 LMGSDKNRFRGDYFTFSSLLSAC-RIEQ---GKQIHAILFKVSY-QFDIPVATALLNMYA 287
Query: 392 KCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFST 451
K + + + FES+ R + N+++ + G ++ + LFG M+ E L PDE+TF++
Sbjct: 288 KSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFAS 347
Query: 452 TLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS 511
L + + SA + Q+ K G +VA SL+ +YSR G++ +L F ++
Sbjct: 348 VLSSCA-KFSAIWEIKQV-QAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE 405
Query: 512 PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRIL 571
P+ + +TS+I A +G ++ L + +M++K L+PD+ITFL L+ C+H G+V+EG
Sbjct: 406 PDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRC 464
Query: 572 FDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHK 631
F M + ++ + H++C++DLL RAG P + ++ C H+
Sbjct: 465 FKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHE 524
Query: 632 NEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTR 684
E A+ L+E++P P + SN Y G+++ + AL RK R
Sbjct: 525 KRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWN------QAALLRKRER 571
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 219/462 (47%), Gaps = 24/462 (5%)
Query: 75 DCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALH------- 127
+ ++ +N+ + A+ K R+ + A +F MPLR+ VT+N+LI H
Sbjct: 69 NSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFC 128
Query: 128 LYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL 187
+ + +F ++ +C S + G+Q+HC +VK G S+ F +LV FY
Sbjct: 129 YLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYG 188
Query: 188 NVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNG--VTF 245
GL AR +F+ + +R+L +WN L+ + G ++E+ M D G TF
Sbjct: 189 KCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTF 248
Query: 246 CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
LL C R+ +GK++ + + K+ + + +I VA AL++ Y+ L A++ FE++
Sbjct: 249 SSLLSAC----RIEQGKQIHAILFKVSY-QFDIPVATALLNMYAKSNHLSDARECFESMV 303
Query: 306 VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ 365
V NV+SWN+++ A N +A+ LF M L P + +L+SC++ I KQ
Sbjct: 304 VRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQ 363
Query: 366 IHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG 425
+ K G + ++LI Y + ++ ++ F S+ + L S++ +L+ G
Sbjct: 364 VQAMVTKKG-SADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHG 422
Query: 426 ATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS---GVEGD 482
++ +++F M+ + L PD++TF L A S + L CF + +E +
Sbjct: 423 FAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLV----QEGLRCFKRMTEFYKIEAE 477
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETL-SSPNAICFTSMING 523
L+D R G ++ + + ++ + P+ + G
Sbjct: 478 DEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGG 519
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 249/486 (51%), Gaps = 10/486 (2%)
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
+N LL + ++ Y +G P+ TF + K C + EGK++ +
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
KMGF + +I+V N+LV FY CG A K F +PV +V+SW +++ L +AL
Sbjct: 134 KMGFYD-DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDM 389
+ F+ M + P++ + V +L S R + LGK IH LK S+ +ALIDM
Sbjct: 193 DTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRA-SLISLETGNALIDM 248
Query: 390 YGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLM-IDEGLMPDEVT 448
Y KC + ++ VF L K+ NS+++ L HC +++ ++LF LM G+ PD
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 449 FSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFET 508
++ L A ++ + +H + L +G++ D + +++D Y++CG++E +L+IF
Sbjct: 309 LTSVLSA--CASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNG 366
Query: 509 LSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
+ S N + +++ G A +G G + L MV+ G KP+ +TFL AL C HTG+V EG
Sbjct: 367 IRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEG 426
Query: 569 RILFDSMKS-VHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSC 627
R F MKS + + P H+ CM+DLLCRAG P K D + ++L +C
Sbjct: 427 RRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSAC 486
Query: 628 RSHKN-EEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREI 686
++ E+ ++++ +D V++ SN +A +D IR + + +++
Sbjct: 487 KNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVP 546
Query: 687 GHSSIE 692
G S IE
Sbjct: 547 GSSYIE 552
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 194/402 (48%), Gaps = 12/402 (2%)
Query: 59 FSFIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNS-ALAVFHTM-PLRDTVTYNLLIS 116
F I+ Q T D + N+ + KS D S + + H++ + + +YN L+S
Sbjct: 22 FKQIQTQLITRDLLRDDLII--NKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLLS 79
Query: 117 AW--CFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLS 174
++ C P + Y G TF V C + REG Q+H V K GF
Sbjct: 80 SYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYD 139
Query: 175 NVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC 234
+++V +LV FY G A ++F E+P R++ W ++ GF G +E+L+ +S+M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM- 198
Query: 235 FDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCL 294
VEPN T+ +L L+ GK + ILK + S + NAL+D Y C L
Sbjct: 199 --DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS-LETGNALIDMYVKCEQL 255
Query: 295 VGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQL-WGQSPSVRSLVGLLNS 353
A + F + ++ +SWNS++S + +A++LF++MQ G P L +L++
Sbjct: 256 SDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSA 315
Query: 354 CSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLEC 413
C+ + G+ +H + L G + H +A++DMY KC IE+++ +F + + +
Sbjct: 316 CASLGAVDHGRWVHEYILTAGI-KWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFT 374
Query: 414 CNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
N+L+ L+ G + + F M+ G P+ VTF L A
Sbjct: 375 WNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNA 416
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 139/314 (44%), Gaps = 49/314 (15%)
Query: 79 TKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLL- 135
T N ID ++K L+ A+ VF + +D V++N +IS C ++A+ L+ M
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSS 300
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
GI+ +SVL+ CA G G VH ++ G + +G +V Y G E A
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETA 360
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
E+F+ + +N+ WN LL G G ESL Y+ M G +PN VTF L C +
Sbjct: 361 LEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHT 420
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSL 315
++EG++ KM E N+F ++ Y GC++
Sbjct: 421 GLVDEGRRY---FHKMKSREYNLFPK---LEHY---GCMI-------------------- 451
Query: 316 VSVNADNDLLC------DALELFTVMQLWGQSPSVRSLVGLLNSC-SRAEEIGLGKQIHC 368
DLLC +ALEL M + P VR +L++C +R + L K+I
Sbjct: 452 -------DLLCRAGLLDEALELVKAMPV---KPDVRICGAILSACKNRGTLMELPKEILD 501
Query: 369 HALKLGFDEGSVHA 382
L + F++ V+
Sbjct: 502 SFLDIEFEDSGVYV 515
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 149/541 (27%), Positives = 274/541 (50%), Gaps = 8/541 (1%)
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
+ + + L +C+ ++ + +H + GF SN+ + L+ YL G + AR+LF
Sbjct: 11 SPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLF 70
Query: 200 DELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLN 259
D + +R++ W ++ F G ++L + M + V+ N T+ +LK C + L
Sbjct: 71 DRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLK 130
Query: 260 EGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVN 319
EG ++ + K G N+ V +AL+ Y+ CG + A+ F+++ +++SWN+++
Sbjct: 131 EGMQIHGSVEK-GNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGY 189
Query: 320 ADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGS 379
N + LF +M G+ P + LL + + + + ++H A+KLGF S
Sbjct: 190 TANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSS 249
Query: 380 VHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH-CGATQDVVELFGLMI 438
+S L++ Y KC + ++ + E KR L C +L+T S T D ++F MI
Sbjct: 250 ALIRS-LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 439 DEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSG-VEGDAAVACSLMDAYSRCG 497
DEV S+ LK + AS T + +H FALKS + D A+ SL+D Y++ G
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTI--GRQIHGFALKSSQIRFDVALGNSLIDMYAKSG 366
Query: 498 HVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALT 557
+E ++ FE + + +TS+I GY R+G ++ + + + M + +KP+++TFL L+
Sbjct: 367 EIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLS 426
Query: 558 GCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPD--KR 615
C+HTG + G ++D+M + HG++ + H SC++D+L R+G
Sbjct: 427 ACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSL 486
Query: 616 DCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIRE 675
W + L +CR H N ++ AA L+ ++P P ++ ++ YA G +D + R+
Sbjct: 487 SSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRK 546
Query: 676 V 676
+
Sbjct: 547 L 547
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 200/424 (47%), Gaps = 5/424 (1%)
Query: 80 KNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLLGI 137
K+ ID ++K D+ A +F + RD V++ +IS + C AL L+ EM +
Sbjct: 50 KDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDV 109
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
+ T+ SVL C G +EG+Q+H V K N+ V L+ Y G E AR
Sbjct: 110 KANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARL 169
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
FD + ER+L WN ++ G+ C + S + + M +G +P+ TF LL+ +
Sbjct: 170 QFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKC 229
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
L +L +K+GF S+ + +LV+ Y CG L A K E +++S +L++
Sbjct: 230 LEIVSELHGLAIKLGFGRSSALI-RSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALIT 288
Query: 318 -VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD 376
+ N+ DA ++F M + +L C+ + +G+QIH ALK
Sbjct: 289 GFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQI 348
Query: 377 EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGL 436
V ++LIDMY K +IE +V FE + ++ + SL+ G + ++L+
Sbjct: 349 RFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNR 408
Query: 437 MIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRC 496
M E + P++VTF + L A S + T ++ K G+E ++D +R
Sbjct: 409 MEHERIKPNDVTFLSLLSACSHTGQ-TELGWKIYDTMINKHGIEAREEHLSCIIDMLARS 467
Query: 497 GHVE 500
G++E
Sbjct: 468 GYLE 471
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 157/605 (25%), Positives = 296/605 (48%), Gaps = 17/605 (2%)
Query: 96 ALAVFHTMPLRDTVTYNLLISAWCF--PPEQALHLYGEM-GLLGIRETSTTFSSVLAVCA 152
A +F ++ D +N+L+ + P +L ++ + ++ S+T++ A+ A
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYA--FAISA 128
Query: 153 RSGFH--REGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVW 210
SGF R G +H + V G S + +G +V Y E AR++FD +PE++ +W
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
N ++ G+ + ES+ + + + + T +L + + L G ++ S
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
K G S+ +V + YS CG + F +++++N+++ N +L
Sbjct: 249 KTG-CYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSL 307
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGF-DEGSVHAQSALID 388
LF + L G +LV L+ + L IH + LK F SV +AL
Sbjct: 308 SLFKELMLSGARLRSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASV--STALTT 362
Query: 389 MYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVT 448
+Y K ++IES+ +F+ +++L N++++ + G T+D + LF M P+ VT
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 449 FSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFET 508
+ L A + + + + +H + E V+ +L+ Y++CG + + ++F+
Sbjct: 423 ITCILSACAQLGALSL--GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Query: 509 LSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
++ N + + +MI+GY +G G++ L + + M+ G+ P +TFLC L C+H G+VKEG
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
Query: 569 RILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCR 628
+F+SM +G +P +H++CMVD+L RAG + +W +LL +CR
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Query: 629 SHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGH 688
HK+ + ++ L ELDPD+ + SN ++ N+ + +R+ A RK+ + G+
Sbjct: 601 IHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGY 660
Query: 689 SSIEI 693
+ IEI
Sbjct: 661 TLIEI 665
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 196/430 (45%), Gaps = 9/430 (2%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLG---IRET 140
+ + K + A VF MP +DT+ +N +IS + + L+ R
Sbjct: 161 VKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLD 220
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD 200
+TT +L A R G+Q+H K G S+ +V + Y G ++ LF
Sbjct: 221 TTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFR 280
Query: 201 ELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE 260
E + ++ +N ++ G+ G E SL+ + + G T L+ V S H L
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV-SGHLMLIY 339
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNA 320
+ LK F+ S+ V+ AL YS + A+K F+ P +++ SWN+++S
Sbjct: 340 A--IHGYCLKSNFL-SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 321 DNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSV 380
N L DA+ LF MQ SP+ ++ +L++C++ + LGK +H F E S+
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF-ESSI 455
Query: 381 HAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDE 440
+ +ALI MY KC I + +F+ +TK+ N++++ G Q+ + +F M++
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
Query: 441 GLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE 500
G+ P VTF L A S A ++ + + G E ++D R GH++
Sbjct: 516 GITPTPVTFLCVLYACS-HAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 501 LSLQIFETLS 510
+LQ E +S
Sbjct: 575 RALQFIEAMS 584
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 203/421 (48%), Gaps = 15/421 (3%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
Q H +++ GF +++ + L ++G AR++F + ++ ++NVL+RGF
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 222 CVEESLNYYS--RMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
SL+ ++ R D ++PN T+ + + S R G+ + + G +S +
Sbjct: 98 SPHSSLSVFAHLRKSTD-LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG-CDSELL 155
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
+ + +V Y + A+K F+ +P ++ I WN+++S N++ +++++F L
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFR--DLIN 213
Query: 340 QSPS---VRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
+S + +L+ +L + + +E+ LG QIH A K G + + I +Y KC I
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD-YVLTGFISLYSKCGKI 272
Query: 397 ESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKAL 456
+ A+F K + N+++ + G T+ + LF E ++ S+TL +L
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF----KELMLSGARLRSSTLVSL 328
Query: 457 SVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAIC 516
V S +H + LKS A+V+ +L YS+ +E + ++F+ +
Sbjct: 329 -VPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 517 FTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMK 576
+ +MI+GY +NG+ + +++ M + P+ +T C L+ C G + G+ + D ++
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 577 S 577
S
Sbjct: 448 S 448
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 175/610 (28%), Positives = 307/610 (50%), Gaps = 26/610 (4%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVT-YNLLISAWCFPP---EQALHLYGEM 132
VY+ + A K D+ A VF MP RD V +N +I+ C E ++ L+ EM
Sbjct: 123 VYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITG-CKESGYHETSVELFREM 181
Query: 133 GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLR 192
LG+R F+++L++C G QVH V+K GF V L+ Y N +
Sbjct: 182 HKLGVRHDKFGFATILSMCDYGSLDF-GKQVHSLVIKAGFFIASSVVNALITMYFNCQVV 240
Query: 193 EVARELFDE--LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
A +F+E + R+ +NV++ G +ESL + +M + P +TF ++
Sbjct: 241 VDACLVFEETDVAVRDQVTFNVVIDGLAGFK-RDESLLVFRKMLEASLRPTDLTFVSVMG 299
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVI 310
CS G ++ +K G+ E V+NA + YS+ A K FE++ ++++
Sbjct: 300 SCSCAAM---GHQVHGLAIKTGY-EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLV 355
Query: 311 SWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
+WN+++S L A+ ++ M + G P + LL + + ++ + + +
Sbjct: 356 TWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACI 412
Query: 371 LKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
+K G + +ALI Y K IE + +FE ++ L N++++ H G +
Sbjct: 413 IKFGLS-SKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 431 VELFGLMIDEG--LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACS 488
+E F +++ ++PD T ST L ++ VS S+ SQ H + L+ G + + +
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLL-SICVSTSSLMLGSQT-HAYVLRHGQFKETLIGNA 529
Query: 489 LMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKG-LKP 547
L++ YS+CG ++ SL++F +S + + + S+I+ Y+R+G G+ + M ++G + P
Sbjct: 530 LINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIP 589
Query: 548 DEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG---XXXXX 604
D TF L+ C+H G+V+EG +F+SM HGV + HFSC+VDLL RAG
Sbjct: 590 DAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESL 649
Query: 605 XXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEI 664
+T R +W +L +C +H + ++G A++L+E + DDP+V++Q SN YA
Sbjct: 650 VKISEKTIGSR-VDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGA 708
Query: 665 GNFDASREIR 674
G + + E R
Sbjct: 709 GMWKEAEETR 718
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/543 (24%), Positives = 240/543 (44%), Gaps = 62/543 (11%)
Query: 160 GVQVHCRVVKFGFLSNVFVGGTLVGFY-------------------------------LN 188
G QVHC ++ G L + V TL+ Y
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 189 VGLREVARELFDELPER-NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCY 247
+G E A E+FD++PER ++A+WN ++ G E G E S+ + M GV + F
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA--IP 305
+L +C ++ L+ GK++ S ++K GF ++ V NAL+ Y C +V A FE +
Sbjct: 196 ILSMC-DYGSLDFGKQVHSLVIKAGFFIASS-VVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 306 VENVISWN----SLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
V + +++N L D LL +F M P+ + V ++ SCS A
Sbjct: 254 VRDQVTFNVVIDGLAGFKRDESLL-----VFRKMLEASLRPTDLTFVSVMGSCSCA---A 305
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSL 421
+G Q+H A+K G+++ ++ +A + MY D ++ VFESL ++ L N++++S
Sbjct: 306 MGHQVHGLAIKTGYEKYTL-VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSY 364
Query: 422 SHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEG 481
+ + + ++ M G+ PDE TF + L + S +++ +K G+
Sbjct: 365 NQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL-----ATSLDLDVLEMVQACIIKFGLSS 419
Query: 482 DAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMV 541
++ +L+ AYS+ G +E + +FE N I + ++I+G+ NG +GL ++
Sbjct: 420 KIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLL 479
Query: 542 EKGLK--PDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
E ++ PD T L+ C T + G + HG + + ++++ + G
Sbjct: 480 ESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR-HGQFKETLIGNALINMYSQCG 538
Query: 600 XXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASN 659
Q +K D W+SL+ + H E + + D+ V A+
Sbjct: 539 TIQNSLEVFNQMSEK-DVVSWNSLISAYSRHGEGENAVNTYKTM----QDEGKVIPDAAT 593
Query: 660 FYA 662
F A
Sbjct: 594 FSA 596
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 27/208 (12%)
Query: 397 ESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKAL 456
ES A+ E+ T TL N +T L+ G ++ ++LF +V TTL+
Sbjct: 9 ESLSAIAENST--TLLNLNRRLTGLTRSGENRNALKLFA----------DVHRCTTLRPD 56
Query: 457 SVSASATFTSSQLL---------HCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFE 507
S S T+++ L HC+A++SG+ + V+ +L+ Y R G++ + F+
Sbjct: 57 QYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFD 116
Query: 508 TLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL-TGCNHTGMVK 566
+ P+ +T++++ + G + V M E+ D++ A+ TGC +G +
Sbjct: 117 EIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPER----DDVAIWNAMITGCKESGYHE 172
Query: 567 EGRILFDSMKSVHGVQPDQRHFSCMVDL 594
LF M + GV+ D+ F+ ++ +
Sbjct: 173 TSVELFREMHKL-GVRHDKFGFATILSM 199
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/597 (26%), Positives = 295/597 (49%), Gaps = 16/597 (2%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETS 141
ID + DL +A +VF + +D ++ +++A+ E+ L L+ M +R
Sbjct: 241 IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNK 300
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
+S L A G +G+ +H V+ G + +V V +L+ Y G E+A +LF
Sbjct: 301 VAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFIN 360
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+ +R++ W+ ++ + + G +E+++ + M ++PN VT +L+ C+ G
Sbjct: 361 IEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLG 420
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
K + +K +ES + A A++ Y+ CG A K+FE +P+++ +++N+L
Sbjct: 421 KSIHCYAIKAD-IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQ 479
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
A +++ M+L G P R++VG+L +C+ + G ++ +K GFD H
Sbjct: 480 IGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS-ECH 538
Query: 382 AQSALIDMYGKCSDIESSVAVFES--LTKRTLECCNSLMTSLSHCGATQDVVELFGLMID 439
ALI+M+ KC + +++ +F+ K T+ N +M G ++ V F M
Sbjct: 539 VAHALINMFTKCDALAAAIVLFDKCGFEKSTVSW-NIMMNGYLLHGQAEEAVATFRQMKV 597
Query: 440 EGLMPDEVTFSTTLKA---LSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRC 496
E P+ VTF ++A LS S L+ C G V SL+D Y++C
Sbjct: 598 EKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQC-----GFCSQTPVGNSLVDMYAKC 652
Query: 497 GHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL 556
G +E S + F +S+ + + +M++ YA +G+ +++ +M E LKPD ++FL L
Sbjct: 653 GMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVL 712
Query: 557 TGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRD 616
+ C H G+V+EG+ +F+ M H ++ + H++CMVDLL +AG + K
Sbjct: 713 SACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTS 772
Query: 617 CFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREI 673
+W +LL S R H N + A LV+L+P +P+ + Q E+ N +++
Sbjct: 773 VGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYSQDRRL-GEVNNVSRIKKV 828
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 235/482 (48%), Gaps = 9/482 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGL-LGI 137
N+ I+A+ + + + +F ++ V +N +I + +AL +G M GI
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
+F+ L CA S ++G+++H + + G S+V++G LV Y AR+
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQ 156
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
+FD++ +++ WN ++ G + GC +L + M V+ + V+ L+ S +
Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEK 216
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
+ + L ++K GF+ + ++ L+D Y C L A+ FE + ++ SW ++++
Sbjct: 217 SDVCRCLHGLVIKKGFIFA---FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMA 273
Query: 318 VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDE 377
A N + LELF +M+ + + + L + + ++ G IH +A++ G
Sbjct: 274 AYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLI- 332
Query: 378 GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLM 437
G V ++L+ MY KC ++E + +F ++ R + ++++ S G + + LF M
Sbjct: 333 GDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDM 392
Query: 438 IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCG 497
+ + P+ VT ++ L+ + A++ S +HC+A+K+ +E + A +++ Y++CG
Sbjct: 393 MRIHIKPNAVTLTSVLQGCAGVAASRLGKS--IHCYAIKADIESELETATAVISMYAKCG 450
Query: 498 HVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALT 557
+L+ FE L +A+ F ++ GY + G + V M G+ PD T + L
Sbjct: 451 RFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQ 510
Query: 558 GC 559
C
Sbjct: 511 TC 512
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 219/482 (45%), Gaps = 13/482 (2%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGL 134
VY ++ + K+RDL SA VF M ++D VT+N ++S AL L+ +M
Sbjct: 135 VYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRS 194
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGV--QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLR 192
+ + +++ A S + V +H V+K GF+ G L+ Y N
Sbjct: 195 CCVDIDHVSLYNLIP--AVSKLEKSDVCRCLHGLVIKKGFIFAFSSG--LIDMYCNCADL 250
Query: 193 EVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
A +F+E+ ++ + W ++ + G EE L + M V N V L+
Sbjct: 251 YAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAA 310
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISW 312
+ L +G + ++ G + ++ VA +L+ YS CG L A++ F I +V+SW
Sbjct: 311 AYVGDLVKGIAIHDYAVQQGLI-GDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSW 369
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
+++++ +A+ LF M P+ +L +L C+ LGK IHC+A+K
Sbjct: 370 SAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIK 429
Query: 373 LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVE 432
E + +A+I MY KC ++ FE L + N+L + G +
Sbjct: 430 ADI-ESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFD 488
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDA 492
++ M G+ PD T L+ + + + + ++ +K G + + VA +L++
Sbjct: 489 VYKNMKLHGVCPDSRTMVGMLQ--TCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINM 546
Query: 493 YSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEIT 551
+++C + ++ +F+ + + + M+NGY +G ++ +A M + +P+ +T
Sbjct: 547 FTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVT 606
Query: 552 FL 553
F+
Sbjct: 607 FV 608
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 163/586 (27%), Positives = 284/586 (48%), Gaps = 21/586 (3%)
Query: 123 EQALHLYGEMGLLGIRETSTTF-----SSVLAVCARSGFHREGVQVHCRVV---KFGFLS 174
EQ L + ++ L + T F + +L VCA S + R G +H ++ +
Sbjct: 8 EQRLLKWDKLASLVPKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAE 67
Query: 175 NVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC 234
+ + +L+ Y+ AR+LFD +PERN+ W +++G+ G E L + M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 235 FDG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGC 293
F G PN + K CSN R+ EGK+ C LK G + S+ FV N LV YS C
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLI-SHEFVRNTLVYMYSLCSG 186
Query: 294 LVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL-ELFTVMQLWGQSPSVRSLVGLLN 352
A + + +P ++ ++S +S L C A E V++ V + + L+
Sbjct: 187 NGEAIRVLDDLPYCDLSVFSSALS----GYLECGAFKEGLDVLRKTANEDFVWNNLTYLS 242
Query: 353 SC---SRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR 409
S S ++ L Q+H ++ GF+ V A ALI+MYGKC + + VF+ +
Sbjct: 243 SLRLFSNLRDLNLALQVHSRMVRFGFN-AEVEACGALINMYGKCGKVLYAQRVFDDTHAQ 301
Query: 410 TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQL 469
+ ++M + + ++ + LF M + + P+E TF+ L S++ + L
Sbjct: 302 NIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLN--SIAELSLLKQGDL 359
Query: 470 LHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGM 529
LH LKSG V +L++ Y++ G +E + + F ++ + + + +MI+G + +G+
Sbjct: 360 LHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGL 419
Query: 530 GKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFS 589
G++ L M+ G P+ ITF+ L C+H G V++G F+ + VQPD +H++
Sbjct: 420 GREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYT 479
Query: 590 CMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPD 649
C+V LL +AG P + D W +LL +C +N +G + A+ +E P+
Sbjct: 480 CIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPN 539
Query: 650 DPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIRQ 695
D V++ SN +A+ ++ ++R + R + +E G S I IR
Sbjct: 540 DSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRN 585
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 192/396 (48%), Gaps = 9/396 (2%)
Query: 67 TTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW---CFPPE 123
T + ++ Y N I+ ++K R+ A +F MP R+ V++ ++ + F E
Sbjct: 59 VTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFE 118
Query: 124 QALHLYGEMGLLG-IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL 182
L L+ M G R + V C+ SG EG Q H +K+G +S+ FV TL
Sbjct: 119 -VLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTL 177
Query: 183 VGFY-LNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPN 241
V Y L G E R L D+LP +L+V++ L G+ E G +E L+ + + N
Sbjct: 178 VYMYSLCSGNGEAIRVL-DDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWN 236
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
+T+ L++ SN R LN ++ S +++ GF + + AL++ Y CG ++ A++ F
Sbjct: 237 NLTYLSSLRLFSNLRDLNLALQVHSRMVRFGF-NAEVEACGALINMYGKCGKVLYAQRVF 295
Query: 302 EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
+ +N+ +++ + +AL LF+ M P+ + LLNS + +
Sbjct: 296 DDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLK 355
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSL 421
G +H LK G+ V +AL++MY K IE + F +T R + N++++
Sbjct: 356 QGDLLHGLVLKSGY-RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC 414
Query: 422 SHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALS 457
SH G ++ +E F MI G +P+ +TF L+A S
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/568 (26%), Positives = 269/568 (47%), Gaps = 40/568 (7%)
Query: 145 SSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPE 204
+S+L+ C GVQVH + G + + LV FY L A+ + +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 205 RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKL 264
+ WNVL+ + + EE + Y RM G+ P+ T+ +LK C + G+ +
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 265 QSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDL 324
I ++ +S+++V NAL+ Y + A++ F+ + + +SWN++++ A +
Sbjct: 167 HGSI-EVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 325 LCDALELFTVMQLWG----------------QSPSVRSLVGL------------------ 350
+A ELF M G Q+ + +GL
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 351 -LNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR 409
L +CS I LGK+IH A+ +D G + ++ LI MY KC D+ ++ VF +
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYD-GIDNVRNTLITMYSKCKDLRHALIVFRQTEEN 344
Query: 410 TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQL 469
+L NS+++ + +++ L M+ G P+ +T ++ L + A +
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPL--CARIANLQHGKE 402
Query: 470 LHCFALKSGVEGDAAVAC-SLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNG 528
HC+ L+ D + SL+D Y++ G + + Q+ + +S + + +TS+I+GY G
Sbjct: 403 FHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQG 462
Query: 529 MGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHF 588
G LA+ M G+KPD +T + L+ C+H+ +V EG LF M+ +G++P +HF
Sbjct: 463 EGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHF 522
Query: 589 SCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDP 648
SCMVDL RAG P K W++LL +C H N ++G AA+ L+E+ P
Sbjct: 523 SCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKP 582
Query: 649 DDPAVWLQASNFYAEIGNFDASREIREV 676
++P ++ +N YA G++ E+R +
Sbjct: 583 ENPGYYVLIANMYAAAGSWSKLAEVRTI 610
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 200/493 (40%), Gaps = 42/493 (8%)
Query: 94 NSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVC 151
N A ++ + + +N+LI+++ E+ + Y M GIR + T+ SVL C
Sbjct: 95 NEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKAC 154
Query: 152 ARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWN 211
+ G VH + + S+++V L+ Y +AR LFD + ER+ WN
Sbjct: 155 GETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWN 214
Query: 212 VLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL----------------------- 248
++ + G E+ + +M F GVE + +T+ +
Sbjct: 215 AVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNF 274
Query: 249 ------------LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVG 296
LK CS + GK++ + + + V N L+ YS C L
Sbjct: 275 PTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSY-DGIDNVRNTLITMYSKCKDLRH 333
Query: 297 AKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSR 356
A F ++ +WNS++S A + +A L M + G P+ +L +L C+R
Sbjct: 334 ALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCAR 393
Query: 357 AEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNS 416
+ GK+ HC+ L+ + ++L+D+Y K I ++ V + ++KR S
Sbjct: 394 IANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTS 453
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
L+ + G + LF M G+ PD VT L A S S +L +
Sbjct: 454 LIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHS-KLVHEGERLFMKMQCE 512
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGLA 535
G+ ++D Y R G + + I + P+ + +++N +G + G
Sbjct: 513 YGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKW 572
Query: 536 VLHAMVEKGLKPD 548
++E +KP+
Sbjct: 573 AAEKLLE--MKPE 583
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 155/358 (43%), Gaps = 47/358 (13%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE----QALHLYGEM 132
+Y N I + + R++ A +F M RD V++N +I+ C+ E +A L+ +M
Sbjct: 179 LYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVIN--CYASEGMWSEAFELFDKM 236
Query: 133 GLLGIRETSTTFSSVLAVCARSGFH----------------------------------- 157
G+ + T++ + C ++G +
Sbjct: 237 WFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAI 296
Query: 158 REGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGF 217
R G ++H + + V TL+ Y A +F + E +L WN ++ G+
Sbjct: 297 RLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGY 356
Query: 218 CELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESN 277
+L EE+ + M G +PN +T +L +C+ L GK+ IL+ +
Sbjct: 357 AQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDY 416
Query: 278 IFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQL 337
+ N+LVD Y+ G +V AK+ + + + +++ SL+ + AL LF M
Sbjct: 417 TMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTR 476
Query: 338 WGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG---SVHAQSALIDMYGK 392
G P ++V +L++CS ++ + G+++ +K+ + G + S ++D+YG+
Sbjct: 477 SGIKPDHVTVVAVLSACSHSKLVHEGERLF---MKMQCEYGIRPCLQHFSCMVDLYGR 531
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
Query: 79 TKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGLLG 136
+N I + K +DL AL VF T+N +IS + E+A HL EM + G
Sbjct: 317 VRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAG 376
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFG-FLSNVFVGGTLVGFYLNVGLREVA 195
+ S T +S+L +CAR + G + HC +++ F + +LV Y G A
Sbjct: 377 FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
+++ D + +R+ + L+ G+ G +L + M G++P+ VT +L CS+
Sbjct: 437 KQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHS 496
Query: 256 RRLNEGKKLQSCILKMG---FVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVIS 311
+ ++EG++L +KM + + + +VD Y G L AK +P + + +
Sbjct: 497 KLVHEGERL---FMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGAT 553
Query: 312 WNSLVS 317
W +L++
Sbjct: 554 WATLLN 559
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 8/249 (3%)
Query: 320 ADNDLLCDALELFTVMQLWGQSPSVRSLV-----GLLNSCSRAEEIGLGKQIHCHALKLG 374
A + L DA + F++++L S LV LL++C G Q+H H + G
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF 434
+ SV L+ Y + + ++ E+ N L+ S + ++V+ +
Sbjct: 74 VEYHSVLVPK-LVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAY 132
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYS 494
M+ +G+ PD T+ + LKA + F +++H S + V +L+ Y
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACGETLDVAF--GRVVHGSIEVSSYKSSLYVCNALISMYK 190
Query: 495 RCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
R ++ ++ ++F+ + +A+ + ++IN YA GM + + M G++ IT+
Sbjct: 191 RFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNI 250
Query: 555 ALTGCNHTG 563
GC TG
Sbjct: 251 ISGGCLQTG 259
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 271/541 (50%), Gaps = 6/541 (1%)
Query: 154 SGFHREGVQVHCRVVKFG-FLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNV 212
S R Q+H V+ G L+ + L+ +G AR++FDELP+R ++V+N
Sbjct: 27 SKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNS 86
Query: 213 LLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMG 272
++ + +E L Y +M + ++P+ TF +K C + L +G+ + + G
Sbjct: 87 MIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFG 146
Query: 273 FVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELF 332
+ ++++FV +++++ Y CG + A+ F + +VI W ++V+ A A+E +
Sbjct: 147 Y-KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFY 205
Query: 333 TVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGK 392
MQ G ++GLL + + +G+ +H + + G V +++L+DMY K
Sbjct: 206 REMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVV-VETSLVDMYAK 264
Query: 393 CSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTT 452
IE + VF + +T SL++ + G E M G PD VT
Sbjct: 265 VGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGV 324
Query: 453 LKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP 512
L A S S + +L+HC+ LK V D A +LMD YS+CG + S +IFE +
Sbjct: 325 LVACSQVGS--LKTGRLVHCYILKRHVL-DRVTATALMDMYSKCGALSSSREIFEHVGRK 381
Query: 513 NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILF 572
+ +C+ +MI+ Y +G G++ +++ M E ++PD TF L+ +H+G+V++G+ F
Sbjct: 382 DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWF 441
Query: 573 DSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKN 632
M + + +QP ++H+ C++DLL RAG +W +LL C +H+N
Sbjct: 442 SVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRN 501
Query: 633 EEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
VG AA +++L+PD + SNF+A + ++R++ M + G+S+IE
Sbjct: 502 LSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIE 561
Query: 693 I 693
+
Sbjct: 562 V 562
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 211/429 (49%), Gaps = 12/429 (2%)
Query: 92 DLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETSTTFSSVLA 149
+++ A VF +P R YN +I + P++ L LY +M I+ S+TF+ +
Sbjct: 65 EISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIK 124
Query: 150 VCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAV 209
C +G V C+ V FG+ ++VFV +++ Y+ G + A LF ++ +R++
Sbjct: 125 ACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVIC 184
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
W ++ GF + G +++ +Y M +G + V LL+ + G+ + +
Sbjct: 185 WTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLY 244
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
+ G + N+ V +LVD Y+ G + A + F + + +SW SL+S A N L A
Sbjct: 245 RTG-LPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF 303
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDM 389
E MQ G P + +LVG+L +CS+ + G+ +HC+ LK + +AL+DM
Sbjct: 304 EAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV--TATALMDM 361
Query: 390 YGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTF 449
Y KC + SS +FE + ++ L C N++++ G Q+VV LF M + + PD TF
Sbjct: 362 YSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATF 421
Query: 450 STTLKALSVSASATFTSSQLLHCFAL---KSGVEGDAAVACSLMDAYSRCGHVELSLQIF 506
++ L ALS S Q H F++ K ++ L+D +R G VE +L +
Sbjct: 422 ASLLSALSHSGLV----EQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMI 477
Query: 507 ETLSSPNAI 515
+ NA+
Sbjct: 478 NSEKLDNAL 486
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 243 bits (621), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 168/635 (26%), Positives = 304/635 (47%), Gaps = 30/635 (4%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQ---ALHLYGEMGLLGIRET 140
+D + K + +L VF +P +++V+++ +I A C AL + EM + +
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAII-AGCVQNNLLSLALKFFKEMQKVNAGVS 280
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD 200
+ ++SVL CA R G Q+H +K F ++ V + Y + A+ LFD
Sbjct: 281 QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 201 ELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE 260
N +N ++ G+ + ++L + R+ G+ + ++ + + C+ + L+E
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNA 320
G ++ +K + ++ VANA +D Y C L A + F+ + + +SWN++++ +
Sbjct: 401 GLQIYGLAIKSS-LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 321 DNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSV 380
N + L LF M P + +L +C+ +G G +IH +K G S
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNS- 517
Query: 381 HAQSALIDMYGKCSDIESSVAV-------------FESL----TKRTLECC---NSLMTS 420
+LIDMY KC IE + + E L KR E C NS+++
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 421 LSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
++D LF M++ G+ PD+ T++T L + ASA + +H +K ++
Sbjct: 578 YVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL--GKQIHAQVIKKELQ 635
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAM 540
D + +L+D YS+CG + S +FE + + + +MI GYA +G G++ + + M
Sbjct: 636 SDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM 695
Query: 541 VEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGX 600
+ + +KP+ +TF+ L C H G++ +G F MK +G+ P H+S MVD+L ++G
Sbjct: 696 ILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGK 755
Query: 601 XXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNE-EVGTRAAQVLVELDPDDPAVWLQASN 659
+ P + D +W +LL C H+N EV A L+ LDP D + + SN
Sbjct: 756 VKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSN 815
Query: 660 FYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
YA+ G ++ ++R K+ +E G S +E++
Sbjct: 816 VYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELK 850
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 224/470 (47%), Gaps = 45/470 (9%)
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
++T FS V CA+ G G Q H ++ GF FV L+ Y N A +F
Sbjct: 47 STTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVF 106
Query: 200 DELPER-------------------------------NLAVWNVLLRGFCELGCVEESLN 228
D++P R ++ WN +L G+ + G +S+
Sbjct: 107 DKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIE 166
Query: 229 YYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFY 288
+ M +G+E +G TF +LKVCS + G ++ ++++G ++++ A+AL+D Y
Sbjct: 167 VFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVG-CDTDVVAASALLDMY 225
Query: 289 SACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLV 348
+ V + + F+ IP +N +SW+++++ N+LL AL+ F MQ S
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 349 GLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTK 408
+L SC+ E+ LG Q+H HALK F + ++A +DMY KC +++ + +F++
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGI-VRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 409 RTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQ 468
+ N+++T S + LF ++ GL DE++ S +A ++ +
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG--LSEGL 402
Query: 469 LLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNG 528
++ A+KS + D VA + +D Y +C + + ++F+ + +A+ + ++I + +NG
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 529 MGKQGLAVLHAMVEKGLKPDEITFLCALTGCN----------HTGMVKEG 568
G + L + +M+ ++PDE TF L C H+ +VK G
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSG 512
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 149/590 (25%), Positives = 271/590 (45%), Gaps = 36/590 (6%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHL 128
+ P V + N+ I+ + KS D+ A + F+ MP+RD V++N ++S + E +++ +
Sbjct: 108 KMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEV 167
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+ +MG GI TF+ +L VC+ G+Q+H VV+ G ++V L+ Y
Sbjct: 168 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 189 VGLREV-ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCY 247
G R V + +F +PE+N W+ ++ G + + +L ++ M + +
Sbjct: 228 -GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYAS 286
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
+L+ C+ L G +L + LK F I V A +D Y+ C + A+ F+
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGI-VRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
N S+N++++ + + AL LF + G SL G+ +C+ + + G QI+
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 368 CHALK--LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG 425
A+K L D V +A IDMYGKC + + VF+ + +R N+++ + G
Sbjct: 406 GLAIKSSLSLD---VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 426 ATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAV 485
+ + LF M+ + PDE TF + LKA + + +H +KSG+ +++V
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACT---GGSLGYGMEIHSSIVKSGMASNSSV 519
Query: 486 ACSLMDAYSRCGHVELSLQI-------------FETLSSPNA-------ICFTSMINGYA 525
CSL+D YS+CG +E + +I E L + + + S+I+GY
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 526 RNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQ 585
+ + M+E G+ PD+ T+ L C + G+ + + +Q D
Sbjct: 580 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE-LQSDV 638
Query: 586 RHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSH-KNEE 634
S +VD+ + G ++ +RD W++++ H K EE
Sbjct: 639 YICSTLVDMYSKCGDLHDSRLMFEKSL-RRDFVTWNAMICGYAHHGKGEE 687
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 167/622 (26%), Positives = 305/622 (49%), Gaps = 38/622 (6%)
Query: 75 DCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEM 132
DCV+ + D + K L+ A VF +P R+ V +N L+ + E+A+ L+ +M
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 133 GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLR 192
G+ T T S+ L+ A G EG Q H + G + +G +L+ FY VGL
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 193 EVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
E A +FD + E+++ WN+++ G+ + G VE+++ M + ++ + VT L+
Sbjct: 326 EYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 385
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISW 312
+ L GK++Q ++ F ES+I +A+ ++D Y+ CG +V AKK F++ +++I W
Sbjct: 386 ARTENLKLGKEVQCYCIRHSF-ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILW 444
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
N+L++ A++ L +AL LF MQL G P+V + ++ S R ++ K
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK-------- 496
Query: 373 LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVE 432
DM+ + S + +L T ++M + G +++ +
Sbjct: 497 ---------------DMFLQM----QSSGIIPNLISWT-----TMMNGMVQNGCSEEAIL 532
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGD-AAVACSLMD 491
M + GL P+ FS T+ + + A+ + +H + +++ ++ SL+D
Sbjct: 533 FLRKMQESGLRPN--AFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVD 590
Query: 492 AYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEIT 551
Y++CG + + ++F + +MI+ YA G K+ +A+ ++ GLKPD IT
Sbjct: 591 MYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNIT 650
Query: 552 FLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQT 611
L+ CNH G + + +F + S ++P H+ MVDLL AG +
Sbjct: 651 ITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Query: 612 PDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASR 671
P K D M SL+ SC + E+ ++ L+E +P++ ++ SN YA G++D
Sbjct: 711 PFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVV 770
Query: 672 EIREVALARKMTREIGHSSIEI 693
++RE+ A+ + ++ G S I+I
Sbjct: 771 KMREMMKAKGLKKKPGCSWIQI 792
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 238/496 (47%), Gaps = 37/496 (7%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLL 135
Y + + + + K L A +F + +R+ ++ +I C E AL + EM
Sbjct: 108 YIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLEN 167
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
I + +V C + R G VH VVK G VFV +L Y G+ + A
Sbjct: 168 EIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDA 227
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
++FDE+P+RN WN L+ G+ + G EE++ +S M GVEP VT L +N
Sbjct: 228 SKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANM 287
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSL 315
+ EGK+ + + G NI + +L++FY G + A+ F+ + ++V++WN +
Sbjct: 288 GGVEEGKQSHAIAIVNGMELDNI-LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLI 346
Query: 316 VSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGF 375
+S L+ DA+ + +M+L +L L+++ +R E + LGK++ C+ ++ F
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF 406
Query: 376 DEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFG 435
+ V A S ++DMY KC I + VF+S ++ L N+L+ + + G + + + LF
Sbjct: 407 ESDIVLA-STVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 436 LMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSR 495
M EG+ P+ +T++ + +L L++G +A
Sbjct: 466 GMQLEGVPPNVITWNLIILSL------------------LRNGQVDEAK----------- 496
Query: 496 CGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCA 555
++ LQ+ + PN I +T+M+NG +NG ++ + L M E GL+P+ + A
Sbjct: 497 ----DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVA 552
Query: 556 LTGCNHTGMVKEGRIL 571
L+ C H + GR +
Sbjct: 553 LSACAHLASLHIGRTI 568
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 232/479 (48%), Gaps = 7/479 (1%)
Query: 123 EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFG--FLSNVFVGG 180
++AL L EM +R + +L C G Q+H R++K G + N ++
Sbjct: 52 KEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIET 111
Query: 181 TLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEP 240
LV FY E+A LF +L RN+ W ++ C +G E +L + M + + P
Sbjct: 112 KLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFP 171
Query: 241 NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKS 300
+ + K C + G+ + ++K G E +FVA++L D Y CG L A K
Sbjct: 172 DNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL-EDCVFVASSLADMYGKCGVLDDASKV 230
Query: 301 FEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
F+ IP N ++WN+L+ N +A+ LF+ M+ G P+ ++ L++ + +
Sbjct: 231 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGV 290
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
GKQ H A+ G + ++ S L++ Y K IE + VF+ + ++ + N +++
Sbjct: 291 EEGKQSHAIAIVNGMELDNILGTS-LLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 421 LSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
G +D + + LM E L D VT +T + A + + + + C+ ++ E
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA--AARTENLKLGKEVQCYCIRHSFE 407
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAM 540
D +A ++MD Y++CG + + ++F++ + I + +++ YA +G+ + L + + M
Sbjct: 408 SDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM 467
Query: 541 VEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+G+ P+ IT+ + G V E + +F M+S G+ P+ ++ M++ + + G
Sbjct: 468 QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNG 525
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 189/412 (45%), Gaps = 12/412 (2%)
Query: 217 FCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMG-FVE 275
C+ G ++E+L+ + M F + + +L+ C R L+ GK++ + ILK G F
Sbjct: 45 LCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYA 104
Query: 276 SNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVM 335
N ++ LV FY+ C L A+ F + V NV SW +++ V L AL F M
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD 395
P + + +C + G+ +H + +K G E V S+L DMYGKC
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL-EDCVFVASSLADMYGKCGV 223
Query: 396 IESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
++ + VF+ + R N+LM G ++ + LF M +G+ P VT ST L
Sbjct: 224 LDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL-- 281
Query: 456 LSVSASATF---TSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP 512
SASA + H A+ +G+E D + SL++ Y + G +E + +F+ +
Sbjct: 282 ---SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK 338
Query: 513 NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILF 572
+ + + +I+GY + G+ + + + M + LK D +T ++ T +K G+ +
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV- 397
Query: 573 DSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
H + D S ++D+ + G T +K D +W++LL
Sbjct: 398 QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK-DLILWNTLL 448
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 153/571 (26%), Positives = 279/571 (48%), Gaps = 7/571 (1%)
Query: 124 QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLS-NVFVGGTL 182
+A EM G+ +S ++ + C G +H R+ + G + +V + +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMGIENPSVLLQNCV 124
Query: 183 VGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNG 242
+ Y E A +LFDE+ E N ++ + E G +++++ +S M G +P
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 243 VTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFE 302
+ LLK N R L+ G+++ + +++ G SN + +V+ Y CG LVGAK+ F+
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLC-SNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 303 AIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
+ V+ ++ L+ DAL+LF + G +L +C+ EE+ L
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLS 422
GKQIH KLG E V + L+D Y KCS ES+ F+ + + +++++
Sbjct: 304 GKQIHACVAKLGL-ESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 362
Query: 423 HCGATQDVVELF-GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEG 481
++ V+ F L + + T+++ +A SV A +H A+K + G
Sbjct: 363 QMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ--VHADAIKRSLIG 420
Query: 482 DAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMV 541
+L+ YS+CG ++ + ++FE++ +P+ + +T+ I+G+A G + L + MV
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 542 EKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXX 601
G+KP+ +TF+ LT C+H G+V++G+ D+M + V P H+ CM+D+ R+G
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 602 XXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFY 661
P + D W L C +HKN E+G A + L +LDP+D A ++ N Y
Sbjct: 541 DEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLY 600
Query: 662 AEIGNFDASREIREVALARKMTREIGHSSIE 692
G ++ + E+ ++ R + +E+ S I+
Sbjct: 601 TWAGKWEEAAEMMKLMNERMLKKELSCSWIQ 631
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 4/238 (1%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIR-ET 140
+D +IK SA F + + V+++ +IS +C E+A+ + +
Sbjct: 327 VDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILN 386
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD 200
S T++S+ C+ G QVH +K + + + L+ Y G + A E+F+
Sbjct: 387 SFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFE 446
Query: 201 ELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE 260
+ ++ W + G G E+L + +M G++PN VTF +L CS+ + +
Sbjct: 447 SMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQ 506
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLVS 317
GK +L+ V I + ++D Y+ G L A K + +P E + +SW +S
Sbjct: 507 GKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLS 564
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 278/558 (49%), Gaps = 10/558 (1%)
Query: 140 TSTTFSSVLAVC--ARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
T+ FS +L C RS + +Q H ++K GF + + G LV L G + AR+
Sbjct: 64 TTHNFSQLLRQCIDERSISGIKTIQAH--MLKSGFPAEI-SGSKLVDASLKCGDIDYARQ 120
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
+FD + ER++ WN L+ + +E++ Y M + V P+ T + K S+
Sbjct: 121 VFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSL 180
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
E ++ + +G SN+FV +ALVD Y G AK + + ++V+ +L+
Sbjct: 181 EKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIV 240
Query: 318 VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDE 377
+ +A++ F M + P+ + +L SC ++IG GK IH +K GF E
Sbjct: 241 GYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF-E 299
Query: 378 GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLM 437
++ +Q++L+ MY +CS ++ S+ VF+ + SL++ L G + + F M
Sbjct: 300 SALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKM 359
Query: 438 IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCG 497
+ + + P+ T S+ L+ S A F + +H K G + D L+D Y +CG
Sbjct: 360 MRDSIKPNSFTLSSALRG--CSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Query: 498 HVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALT 557
+++ +F+TLS + I +MI YA+NG G++ L + M+ GL+P+++T L L
Sbjct: 418 CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 558 GCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDC 617
CN++ +V+EG LFDS + + H++CMVDLL RAG + + D
Sbjct: 478 ACNNSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINP-DL 535
Query: 618 FMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVA 677
+W +LL +C+ H+ E+ R + ++E++P D + SN YA G ++ E++
Sbjct: 536 VLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKM 595
Query: 678 LARKMTREIGHSSIEIRQ 695
K+ + S +EI +
Sbjct: 596 KDMKLKKNPAMSWVEINK 613
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 162/606 (26%), Positives = 299/606 (49%), Gaps = 20/606 (3%)
Query: 87 FIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLG-IRETSTT 143
F++ +L A VF M R+ ++N+L+ + ++A+ LY M +G ++ T
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
F VL C G +VH VV++G+ ++ V L+ Y+ G + AR LFD +P
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS--NHRRLNEG 261
R++ WN ++ G+ E G E L + M V+P+ +T ++ C RRL G
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL--G 316
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
+ + + ++ GF +I V N+L Y G A+K F + ++++SW +++S
Sbjct: 317 RDIHAYVITTGFA-VDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
N L A++ + +M P ++ +L++C+ ++ G ++H A+K +
Sbjct: 376 NFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
A + LI+MY KC I+ ++ +F ++ ++ + S++ L + + +F +
Sbjct: 436 ANN-LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMT 493
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVEL 501
L P+ +T + + + + +H L++GV D + +L+D Y RCG +
Sbjct: 494 LQPNAITLTAA--LAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 502 SLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNH 561
+ F + + + ++ GY+ G G + + MV+ ++PDEITF+ L GC+
Sbjct: 552 AWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 562 TGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWS 621
+ MV++G + F M+ +GV P+ +H++C+VDLL RAG + P D +W
Sbjct: 611 SQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669
Query: 622 SLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARK 681
+LL +CR H ++G +AQ + ELD ++ N YA+ G + REVA R+
Sbjct: 670 ALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKW------REVAKVRR 723
Query: 682 MTREIG 687
M +E G
Sbjct: 724 MMKENG 729
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 236/503 (46%), Gaps = 9/503 (1%)
Query: 123 EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL 182
E+A+ L M L + F +++ +C EG +V+ + V +G
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAF 135
Query: 183 VGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCF-DGVEPN 241
+ ++ G A +F ++ ERNL WNVL+ G+ + G +E++ Y RM + GV+P+
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
TF +L+ C L GK++ +++ G+ E +I V NAL+ Y CG + A+ F
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGY-ELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 302 EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
+ +P ++ISWN+++S +N + + LELF M+ P + +L ++++C +
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSL 421
LG+ IH + + GF + ++L MY + +F + ++ + ++++
Sbjct: 315 LGRDIHAYVITTGF-AVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Query: 422 SHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEG 481
+ ++ + +M + + PDE+T + L A + + LH A+K+ +
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGD--LDTGVELHKLAIKARLIS 431
Query: 482 DAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMV 541
VA +L++ YS+C ++ +L IF + N I +TS+I G N + L L M
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM- 490
Query: 542 EKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXX 601
+ L+P+ IT AL C G + G+ + + GV D + ++D+ R G
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRT-GVGLDDFLPNALLDMYVRCGRM 549
Query: 602 XXXXXXXXQTPDKRDCFMWSSLL 624
K+D W+ LL
Sbjct: 550 NTAWSQF--NSQKKDVTSWNILL 570
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 165/357 (46%), Gaps = 7/357 (1%)
Query: 214 LRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGF 273
L G C G +EE++ + M V + F L+++C R EG K+ S L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALS-SM 124
Query: 274 VESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFT 333
+ + NA + + G LV A F + N+ SWN LV A +A+ L+
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 334 VMQLW--GQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYG 391
M LW G P V + +L +C ++ GK++H H ++ G+ E + +ALI MY
Sbjct: 185 RM-LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGY-ELDIDVVNALITMYV 242
Query: 392 KCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFST 451
KC D++S+ +F+ + +R + N++++ G + +ELF M + PD +T ++
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTS 302
Query: 452 TLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS 511
+ A + +H + + +G D +V SL Y G + ++F +
Sbjct: 303 VISACELLGDRRLGRD--IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER 360
Query: 512 PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
+ + +T+MI+GY N + + + M + +KPDEIT L+ C G + G
Sbjct: 361 KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/606 (25%), Positives = 298/606 (49%), Gaps = 10/606 (1%)
Query: 96 ALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCAR 153
A +F M R +N L+ + E+ L+ + M + + T L C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 154 SGFHREGVQVHCRVVKFGFL-SNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNV 212
G +H V K L S+++VG +L+ Y+ G A +FDEL + ++ W+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 213 LLRGFCELGCVEESLNYYSRMCF-DGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKM 271
++ GF + G +++ ++ RM V P+ VT L+ C+ G+ + +++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALEL 331
GF +++ + N+L++ Y+ A F+ I ++VISW+++++ N +AL +
Sbjct: 193 GF-SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 332 FTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYG 391
F M G P+V +++ +L +C+ A ++ G++ H A++ G E V +AL+DMY
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL-ETEVKVSTALVDMYM 310
Query: 392 KCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMI-DEGLMPDEVTFS 450
KC E + AVF + ++ + +L++ + G +E F +M+ + PD +
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 451 TTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS 510
L S S ++ H + +K G + + + SL++ YSRCG + + ++F ++
Sbjct: 371 KVLG--SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 511 SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKG-LKPDEITFLCALTGCNHTGMVKEGR 569
+ + +TS+I GY +G G + L + MV+ +KP+E+TFL L+ C+H G++ EG
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488
Query: 570 ILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRS 629
+F M + + + P+ H++ +VDLL R G + P + +LL +CR
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRI 548
Query: 630 HKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHS 689
H+N E+ A+ L EL+ + ++ SN Y G ++ ++R R + + + S
Sbjct: 549 HQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAES 608
Query: 690 SIEIRQ 695
IEIR+
Sbjct: 609 LIEIRR 614
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 185/386 (47%), Gaps = 7/386 (1%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGL 134
+Y + I +IK + AL +F + D VT++ ++S + P QA+ + M +
Sbjct: 96 LYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVM 155
Query: 135 LG-IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE 193
+ T ++++ C + R G VH V++ GF +++ + +L+ Y +
Sbjct: 156 ASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFK 215
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
A LF + E+++ W+ ++ + + G E+L ++ M DG EPN T +L+ C+
Sbjct: 216 EAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACA 275
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWN 313
L +G+K ++ G +E+ + V+ ALVD Y C A F IP ++V+SW
Sbjct: 276 AAHDLEQGRKTHELAIRKG-LETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWV 334
Query: 314 SLVSVNADNDLLCDALELFTVMQLWGQS-PSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
+L+S N + ++E F++M L + P +V +L SCS + K H + +K
Sbjct: 335 ALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK 394
Query: 373 LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVE 432
GFD S L+++Y +C + ++ VF + + SL+T G +E
Sbjct: 395 YGFDSNPFIGAS-LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALE 453
Query: 433 LFGLMIDEG-LMPDEVTFSTTLKALS 457
F M+ + P+EVTF + L A S
Sbjct: 454 TFNHMVKSSEVKPNEVTFLSILSACS 479
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 155/581 (26%), Positives = 281/581 (48%), Gaps = 59/581 (10%)
Query: 158 REGVQVHCRVVKFGFLSNVFVGGTLVGFYL--NVGLREVARELFDELPERNLAVWNVLLR 215
R+ Q H +++ G S+ + L + E AR++FDE+P+ N WN L+R
Sbjct: 44 RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIR 103
Query: 216 GFCE-----------LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKL 264
+ L V ES Y PN TF +L+K + L+ G+ L
Sbjct: 104 AYASGPDPVLSIWAFLDMVSESQCY----------PNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 265 QSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDL 324
+K V S++FVAN+L+ Y +CG L A K F I ++V+SWNS+++
Sbjct: 154 HGMAVKSA-VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 325 LCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQS 384
ALELF M+ S ++VG+L++C++ + G+Q+ C ++ ++ +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV-CSYIEENRVNVNLTLAN 271
Query: 385 ALIDMYGKCSDIESSVAVFE-------------------------------SLTKRTLEC 413
A++DMY KC IE + +F+ S+ ++ +
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 414 CNSLMTSLSHCGATQDVVELFG-LMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHC 472
N+L+++ G + + +F L + + + +++T +TL A + + + +H
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL--GRWIHS 389
Query: 473 FALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQ 532
+ K G+ + V +L+ YS+CG +E S ++F ++ + +++MI G A +G G +
Sbjct: 390 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 449
Query: 533 GLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMV 592
+ + + M E +KP+ +TF C+HTG+V E LF M+S +G+ P+++H++C+V
Sbjct: 450 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 509
Query: 593 DLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPA 652
D+L R+G P +W +LL +C+ H N + A L+EL+P +
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569
Query: 653 VWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
+ SN YA++G ++ E+R+ + +E G SSIEI
Sbjct: 570 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 215/455 (47%), Gaps = 38/455 (8%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRE---TSTTFSSVLA 149
L A VF +P ++ +N LI A+ P+ L ++ + ++ + TF ++
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 150 VCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAV 209
A G +H VK S+VFV +L+ Y + G + A ++F + E+++
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
WN ++ GF + G +++L + +M + V+ + VT +L C+ R L G+++ S I
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI- 258
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI------------------------- 304
+ V N+ +ANA++D Y+ CG + AK+ F+A+
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 318
Query: 305 ------PVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSP-SVRSLVGLLNSCSRA 357
P +++++WN+L+S N +AL +F +QL + +LV L++C++
Sbjct: 319 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 378
Query: 358 EEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSL 417
+ LG+ IH + K G + H SALI MY KC D+E S VF S+ KR + +++
Sbjct: 379 GALELGRWIHSYIKKHGI-RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 418 MTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS 477
+ L+ G + V++F M + + P+ VTF+ A S + S L H
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES-LFHQMESNY 496
Query: 478 GVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP 512
G+ + ++D R G++E +++ E + P
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIP 531
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 191/422 (45%), Gaps = 52/422 (12%)
Query: 248 LLKVCSNHRRLNE--GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
L++ C + R+L + G +++ + S +F AL F S L A+K F+ IP
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS----LEYARKVFDEIP 91
Query: 306 VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQS---PSVRSLVGLLNSCSRAEEIGL 362
N +WN+L+ A L ++ + + +S P+ + L+ + + + L
Sbjct: 92 KPNSFAWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 363 GKQIHCHALK--LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
G+ +H A+K +G D V ++LI Y C D++S+ VF ++ ++ + NS++
Sbjct: 150 GQSLHGMAVKSAVGSD---VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206
Query: 421 LSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
G+ +ELF M E + VT L A + + F + + + ++ V
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEF--GRQVCSYIEENRVN 264
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMING----------------- 523
+ +A +++D Y++CG +E + ++F+ + + + +T+M++G
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Query: 524 --------------YARNGMGKQGLAVLHAM-VEKGLKPDEITFLCALTGCNHTGMVKEG 568
Y +NG + L V H + ++K +K ++IT + L+ C G ++ G
Sbjct: 325 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384
Query: 569 RILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCR 628
R + +K HG++ + S ++ + + G + +KRD F+WS+++
Sbjct: 385 RWIHSYIKK-HGIRMNFHVTSALIHMYSKCG-DLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 629 SH 630
H
Sbjct: 443 MH 444
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 117/238 (49%), Gaps = 6/238 (2%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLL-GIRET 140
+D + S D +A V ++MP +D V +N LISA+ P +AL ++ E+ L ++
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLN 364
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD 200
T S L+ CA+ G G +H + K G N V L+ Y G E +RE+F+
Sbjct: 365 QITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 201 ELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE 260
+ +R++ VW+ ++ G GC E+++ + +M V+PNGVTF + CS+ ++E
Sbjct: 425 SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 261 GKKL-QSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS-WNSLV 316
+ L G V A +VD G L A K EA+P+ S W +L+
Sbjct: 485 AESLFHQMESNYGIVPEEKHYA-CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/500 (29%), Positives = 256/500 (51%), Gaps = 13/500 (2%)
Query: 198 LFDELPERNLAVWNVLLRGFCEL-GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
LF E N +N ++RG E +L+ Y RM F G++P+ T+ ++ C+
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV 316
+ G+ + S + K+G +E ++ + ++L+ Y+ CG + A+K F+ I + +SWNS++
Sbjct: 147 EIGVGRSVHSSLFKVG-LERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 317 SVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL--KLG 374
S ++ DA++LF M+ G P R+LV +L +CS ++ G+ + A+ K+G
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 265
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF 434
S S LI MYGKC D++S+ VF + K+ +++T S G + + +LF
Sbjct: 266 L---STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLF 322
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYS 494
M G+ PD T ST L A + H L ++ + VA L+D Y
Sbjct: 323 FEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASEL--SLQHNIYVATGLVDMYG 380
Query: 495 RCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
+CG VE +L++FE + N + +MI YA G K+ L + M + P +ITF+
Sbjct: 381 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIG 437
Query: 555 ALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDK 614
L+ C H G+V +G F M S+ G+ P H++ ++DLL RAG + P K
Sbjct: 438 VLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
Query: 615 RDCFMWSSLLRSCRSHKNEEVGTRAAQVLVEL-DPDDPAVWLQASNFYAEIGNFDASREI 673
D M +++L +C K+ + +A ++L+E+ + + ++ +SN A++ +D S ++
Sbjct: 498 PDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKM 557
Query: 674 REVALARKMTREIGHSSIEI 693
R + R + + G S IEI
Sbjct: 558 RALMRDRGVVKTPGCSWIEI 577
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 215/439 (48%), Gaps = 16/439 (3%)
Query: 92 DLNSALAVFHTMPLRDTVTYNLLI----SAWCFPPEQALHLYGEMGLLGIRETSTTFSSV 147
D N + +F + ++N +I + W E AL LY M G++ T++ V
Sbjct: 80 DFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWN-DHEAALSLYRRMKFSGLKPDKFTYNFV 138
Query: 148 LAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNL 207
CA+ G VH + K G +V + +L+ Y G AR+LFDE+ ER+
Sbjct: 139 FIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDT 198
Query: 208 AVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSC 267
WN ++ G+ E G +++++ + +M +G EP+ T +L CS+ L G+ L+
Sbjct: 199 VSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEM 258
Query: 268 IL--KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLL 325
+ K+G + F+ + L+ Y CG L A++ F + ++ ++W ++++V + N
Sbjct: 259 AITKKIGL---STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKS 315
Query: 326 CDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSA 385
+A +LF M+ G SP +L +L++C + LGKQI HA +L + +++ +
Sbjct: 316 SEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL-QHNIYVATG 374
Query: 386 LIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPD 445
L+DMYGKC +E ++ VFE++ + N+++T+ +H G ++ + LF M + P
Sbjct: 375 LVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPS 431
Query: 446 EVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQI 505
++TF L A V A + H + G+ +++D SR G ++ + +
Sbjct: 432 DITFIGVLSA-CVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEF 490
Query: 506 FETL-SSPNAICFTSMING 523
E P+ I +++
Sbjct: 491 MERFPGKPDEIMLAAILGA 509
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 5/224 (2%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGLLGIRETS 141
I + K DL+SA VF+ M +D V + +I+ + +A L+ EM G+ +
Sbjct: 275 ISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDA 334
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
T S+VL+ C G G Q+ + N++V LV Y G E A +F+
Sbjct: 335 GTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEA 394
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+P +N A WN ++ + G +E+L + RM V P+ +TF +L C + +++G
Sbjct: 395 MPVKNEATWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACVHAGLVHQG 451
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
+ + M + I ++D S G L A + E P
Sbjct: 452 CRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFP 495
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 11/228 (4%)
Query: 345 RSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFE 404
R + LL C ++ +QI L SV + LI + D S +F
Sbjct: 38 RDFLFLLKKCISVNQL---RQIQAQMLL-----HSVEKPNFLIPKAVELGDFNYSSFLFS 89
Query: 405 SLTKRTLECCNSLMTSLSHCGATQDV-VELFGLMIDEGLMPDEVTFSTTLKALSVSASAT 463
+ N ++ L++ + + L+ M GL PD+ T++ A +
Sbjct: 90 VTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIG 149
Query: 464 FTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMING 523
S +H K G+E D + SL+ Y++CG V + ++F+ ++ + + + SMI+G
Sbjct: 150 VGRS--VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISG 207
Query: 524 YARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRIL 571
Y+ G K + + M E+G +PDE T + L C+H G ++ GR+L
Sbjct: 208 YSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 255
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 255/502 (50%), Gaps = 6/502 (1%)
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNY--YSRMCFDGVEPNGVTFCYLLKVC 252
AR L +L ++ +W+ L+ F + L++ Y M +GV P+ TF LLK
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISW 312
R N + + I+K G ++S+ FV N+L+ YS+ G A + F+ ++V++W
Sbjct: 115 FKLRDSNPFQ-FHAHIVKFG-LDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTW 172
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
+++ N +A+ F M+ G + + ++V +L + + E++ G+ +H L+
Sbjct: 173 TAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLE 232
Query: 373 LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVE 432
G + V S+L+DMYGKCS + + VF+ + R + +L+ +
Sbjct: 233 TGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGML 292
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDA 492
+F M+ + P+E T S+ L A + + +HC+ +K+ +E + +L+D
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSA--CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDL 350
Query: 493 YSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
Y +CG +E ++ +FE L N +T+MING+A +G + + + M+ + P+E+TF
Sbjct: 351 YVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTF 410
Query: 553 LCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTP 612
+ L+ C H G+V+EGR LF SMK ++P H++CMVDL R G + P
Sbjct: 411 MAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMP 470
Query: 613 DKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASRE 672
+ +W +L SC HK+ E+G AA +++L P + +N Y+E N+D
Sbjct: 471 MEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVAR 530
Query: 673 IREVALARKMTREIGHSSIEIR 694
+R+ +++ + G S IE++
Sbjct: 531 VRKQMKDQQVVKSPGFSWIEVK 552
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 154/294 (52%), Gaps = 1/294 (0%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
Q H +VKFG S+ FV +L+ Y + GL + A LFD ++++ W ++ GF G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 222 CVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVA 281
E++ Y+ M GV N +T +LK + G+ + L+ G V+ ++F+
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 282 NALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQS 341
++LVD Y C C A+K F+ +P NV++W +L++ + + +F M +
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 342 PSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVA 401
P+ ++L +L++C+ + G+++HC+ +K E + A + LID+Y KC +E ++
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSI-EINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 402 VFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
VFE L ++ + +++ + G +D +LF M+ + P+EVTF L A
Sbjct: 363 VFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSA 416
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 9/245 (3%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW----CFPPEQALHLYGEM 132
V+ + +D + K + A VF MP R+ VT+ LI+ + CF ++ + ++ EM
Sbjct: 240 VFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCF--DKGMLVFEEM 297
Query: 133 GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLR 192
+ T SSVL+ CA G G +VHC ++K N G TL+ Y+ G
Sbjct: 298 LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCL 357
Query: 193 EVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
E A +F+ L E+N+ W ++ GF G ++ + + M V PN VTF +L C
Sbjct: 358 EEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSAC 417
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE--NVI 310
++ + EG++L + +E +VD + G L AK E +P+E NV+
Sbjct: 418 AHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVV 477
Query: 311 SWNSL 315
W +L
Sbjct: 478 -WGAL 481
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 251/488 (51%), Gaps = 12/488 (2%)
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
WNV LR ES++ Y M G P+ +F ++LK C++ G++L C +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLH-CHV 79
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS--WNSLVSVNADNDLLCD 327
G E+ FV AL+ Y CG + A+K FE P + +S +N+L+S N + D
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 328 ALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALI 387
A +F M+ G S +++GL+ C+ E + LG+ +H +K G D V ++ I
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDS-EVAVLNSFI 198
Query: 388 DMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEV 447
MY KC +E+ +F+ + + L N++++ S G DV+EL+ M G+ PD
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 448 TFSTTLKALSVSASATFTSSQLLH---CFALKSGVEGDAAVACSLMDAYSRCGHVELSLQ 504
T + L S+ A + ++ H +G + V+ + + Y+RCG++ +
Sbjct: 259 TLVSVL-----SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARA 313
Query: 505 IFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGM 564
+F+ + + + +T+MI Y +GMG+ GL + M+++G++PD F+ L+ C+H+G+
Sbjct: 314 VFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGL 373
Query: 565 VKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
+G LF +MK + ++P H+SC+VDLL RAG P + D +W +LL
Sbjct: 374 TDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
Query: 625 RSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTR 684
+C+ HKN ++ A ++E +P++ ++ SN Y++ N + IR + R +
Sbjct: 434 GACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRK 493
Query: 685 EIGHSSIE 692
+ G+S +E
Sbjct: 494 KPGYSYVE 501
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 206/437 (47%), Gaps = 18/437 (4%)
Query: 94 NSALAVFHTMP----LRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLA 149
NSA+A + P LR+ + Y L S +++ LY M G + +F +L
Sbjct: 10 NSAVAAVASTPWNVRLRE-LAYQSLFS-------ESISLYRSMLRSGSSPDAFSFPFILK 61
Query: 150 VCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERN-LA 208
CA G Q+HC V K G + FV L+ Y GL AR++F+E P+ + L+
Sbjct: 62 SCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLS 121
Query: 209 V-WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSC 267
V +N L+ G+ V ++ + RM GV + VT L+ +C+ L G+ L
Sbjct: 122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQ 181
Query: 268 ILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCD 327
+K G ++S + V N+ + Y CG + ++ F+ +PV+ +I+WN+++S + N L D
Sbjct: 182 CVKGG-LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYD 240
Query: 328 ALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALI 387
LEL+ M+ G P +LV +L+SC+ +G ++ GF +V +A I
Sbjct: 241 VLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP-NVFVSNASI 299
Query: 388 DMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEV 447
MY +C ++ + AVF+ + ++L +++ G + + LF MI G+ PD
Sbjct: 300 SMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGA 359
Query: 448 TFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFE 507
F L A S S T +L + +E L+D R G ++ +++ E
Sbjct: 360 VFVMVLSACSHSG-LTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 508 TLS-SPNAICFTSMING 523
++ P+ + +++
Sbjct: 419 SMPVEPDGAVWGALLGA 435
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 155/329 (47%), Gaps = 9/329 (2%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRD--TVTYNLLISAWCFPPE--QALHLYGEMGLLGIRE 139
I + K + A VF P +V YN LIS + + A +++ M G+
Sbjct: 95 ISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSV 154
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
S T ++ +C + G +H + VK G S V V + + Y+ G E R LF
Sbjct: 155 DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF 214
Query: 200 DELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLN 259
DE+P + L WN ++ G+ + G + L Y +M GV P+ T +L C++
Sbjct: 215 DEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKK 274
Query: 260 EGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVN 319
G ++ + GFV N+FV+NA + Y+ CG L A+ F+ +PV++++SW +++
Sbjct: 275 IGHEVGKLVESNGFV-PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCY 333
Query: 320 ADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGF--DE 377
+ + L LF M G P V +L++CS + G ++ A+K + +
Sbjct: 334 GMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF-RAMKREYKLEP 392
Query: 378 GSVHAQSALIDMYGKCSDIESSVAVFESL 406
G H S L+D+ G+ ++ ++ ES+
Sbjct: 393 GPEH-YSCLVDLLGRAGRLDEAMEFIESM 420
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 3/239 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIR 138
N I ++K + + +F MP++ +T+N +IS + L LY +M G+
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
T SVL+ CA G + G +V V GF+ NVFV + Y G AR +
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
FD +P ++L W ++ + G E L + M G+ P+G F +L CS+
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
++G +L + + +E + LVD G L A + E++PVE + W +L+
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 26/199 (13%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLL- 135
V+ N I + + +L A AVF MP++ V++ +I + +H GE+GL+
Sbjct: 292 VFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCY------GMHGMGEIGLML 345
Query: 136 -------GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVK--FGFLSNVFVGGTLVGFY 186
GIR F VL+ C+ SG +G+++ R +K + LV
Sbjct: 346 FDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF-RAMKREYKLEPGPEHYSCLVDLL 404
Query: 187 LNVGLREVARELFDELP-ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGV---EPNG 242
G + A E + +P E + AVW LL G C+ + ++++ + + F V EPN
Sbjct: 405 GRAGRLDEAMEFIESMPVEPDGAVWGALL-GACK---IHKNVD-MAELAFAKVIEFEPNN 459
Query: 243 VTFCYLLKVCSNHRRLNEG 261
+ + L+ + + EG
Sbjct: 460 IGYYVLMSNIYSDSKNQEG 478
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 172/640 (26%), Positives = 301/640 (47%), Gaps = 72/640 (11%)
Query: 93 LNSALAVFHTMPLRDTVTYN--LLISAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAV 150
L A +F MP RD + +N ++++ E+A+ L+ EM G + +T +L V
Sbjct: 39 LGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 151 CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVW 210
C+ EG Q+H V++ G SNV + +L+ Y G E++R++F+ + +RNL+ W
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW 158
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTF------------------------- 245
N +L + +LG V++++ M G++P+ VT+
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 246 ----------CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLV 295
LL+ + L GK + IL+ + +++V L+D Y G L
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR-NQLWYDVYVETTLIDMYIKTGYLP 277
Query: 296 GAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCS 355
A+ F+ + +N+++WNSLVS + LL DA L M+ G P
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDA----------- 326
Query: 356 RAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCN 415
I ++L G+ ++ +D+ GK E VA +
Sbjct: 327 ----------ITWNSLASGY--ATLGKPEKALDVIGKMK--EKGVA-------PNVVSWT 365
Query: 416 SLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFAL 475
++ + S G ++ +++F M +EG+ P+ T ST LK L + S + +H F L
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILG--CLSLLHSGKEVHGFCL 423
Query: 476 KSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLA 535
+ + DA VA +L+D Y + G ++ +++IF + + + + M+ GYA G G++G+A
Sbjct: 424 RKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIA 483
Query: 536 VLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLL 595
M+E G++PD ITF L+ C ++G+V+EG FD M+S +G+ P H SCMVDLL
Sbjct: 484 AFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLL 543
Query: 596 CRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWL 655
R+G K D +W + L SC+ H++ E+ A + L L+P + A ++
Sbjct: 544 GRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYM 603
Query: 656 QASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIRQ 695
N Y+ + ++ IR + ++ + S I+I Q
Sbjct: 604 MMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQ 643
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 176/403 (43%), Gaps = 70/403 (17%)
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNA 320
G + ++K G S+ V +A + FY C L A K F+ +P + ++WN +V VN
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 321 DNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSV 380
+ A+ELF MQ G ++V LL CS E G+QIH + L+LG E +V
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGL-ESNV 124
Query: 381 HAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDE 440
++LI MY + +E S VF S+ R L NS+++S + G D + L M
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 441 GLMPDEVTFSTTL-----KALSVSASATFTSSQL-------------------------- 469
GL PD VT+++ L K LS A A Q+
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 470 --LHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS---------------- 511
+H + L++ + D V +L+D Y + G++ + +F+ + +
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 512 -------------------PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
P+AI + S+ +GYA G ++ L V+ M EKG+ P+ +++
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 553 LCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLL 595
+GC+ G + +F M+ GV P+ S ++ +L
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQE-EGVGPNAATMSTLLKIL 406
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 205/451 (45%), Gaps = 45/451 (9%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPL----RDTVTYNLLISAWCFP--PEQALHLYGEMGL 134
N + ++ K ++ A+ + M + D VT+N L+S + + A+ + M +
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
G++ ++++ SS+L A G + G +H +++ +V+V TL+ Y+ G
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
AR +FD + +N+ WN L+ G ++++ RM +G++P+ +T+ L S
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL---ASG 335
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
+ L + +K I KM E NV+SW +
Sbjct: 336 YATLGKPEKALDVIGKMK-----------------------------EKGVAPNVVSWTA 366
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
+ S + N +AL++F MQ G P+ ++ LL + GK++H L+
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF 434
+ +AL+DMYGK D++S++ +F + ++L N ++ + G ++ + F
Sbjct: 427 LI-CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS--GVEGDAAVACSLMDA 492
+M++ G+ PD +TF++ LSV ++ + ++S G+ ++D
Sbjct: 486 SVMLEAGMEPDAITFTSV---LSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDL 542
Query: 493 YSRCGHVELSLQIFETLS-SPNAICFTSMIN 522
R G+++ + +T+S P+A + + ++
Sbjct: 543 LGRSGYLDEAWDFIQTMSLKPDATIWGAFLS 573
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 5/239 (2%)
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSL 421
LG IH +K G D SA + YG+C + + +F+ + KR N ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 422 SHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSV-SASATFTSSQLLHCFALKSGVE 480
G + VELF M G + ST +K L V S F + +H + L+ G+E
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYD---STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLE 121
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAM 540
+ ++ SL+ YSR G +ELS ++F ++ N + S+++ Y + G + +L M
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 541 VEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
GLKPD +T+ L+G G+ K+ + M+ + G++P S ++ + G
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ-IAGLKPSTSSISSLLQAVAEPG 239
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/477 (20%), Positives = 184/477 (38%), Gaps = 109/477 (22%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCF---------------- 120
VY + ID +IK+ L A VF M ++ V +N L+S +
Sbjct: 260 VYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEK 319
Query: 121 ---------------------PPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHR- 158
PE+AL + G+M G+ +++++ + C+++G R
Sbjct: 320 EGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRN 379
Query: 159 ----------EGV------------------------QVHCRVVKFGFLSNVFVGGTLVG 184
EGV +VH ++ + + +V LV
Sbjct: 380 ALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVD 439
Query: 185 FYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
Y G + A E+F + ++LA WN +L G+ G EE + +S M G+EP+ +T
Sbjct: 440 MYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAIT 499
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
F +L VC N + EG K + + I + +VD G L A + +
Sbjct: 500 FTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTM 559
Query: 305 PVE-NVISWNSLVS---VNADNDLLCDA------------------LELFTVMQLWGQSP 342
++ + W + +S ++ D +L A + L++ + W
Sbjct: 560 SLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVE 619
Query: 343 SVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALI--DMYGKCSDIESSV 400
+R+L + N+ R +++ QI + + + EG H I ++Y S+++ S
Sbjct: 620 RIRNL--MRNNRVRVQDLWSWIQID-QTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSG 676
Query: 401 AVFESLTKRTLECCNSLMTSLSH----CGATQDVVELFGLMIDEGLMPDEVTFSTTL 453
V ++ C + ++ G T+ + +GL+ +GL P V +T +
Sbjct: 677 YVPDT------SCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNI 727
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 173/652 (26%), Positives = 308/652 (47%), Gaps = 31/652 (4%)
Query: 55 QSLSFSFIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLL 114
Q LSF Q SD Y + ++ + K L A VF M RD V + +
Sbjct: 60 QRLSFGLSIHQQVLVNGFSSD-FYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAM 118
Query: 115 ISAWCFPPE----QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCR---V 167
I C+ +A L EM GI+ T +L SG E Q+ C
Sbjct: 119 IG--CYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML-----SGV-LEITQLQCLHDFA 170
Query: 168 VKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESL 227
V +GF ++ V +++ Y A++LFD++ +R++ WN ++ G+ +G + E L
Sbjct: 171 VIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEIL 230
Query: 228 NYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDF 287
RM DG+ P+ TF L V L G+ L I+K GF + ++ + AL+
Sbjct: 231 KLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF-DVDMHLKTALITM 289
Query: 288 YSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSL 347
Y CG + + E IP ++V+ W ++S AL +F+ M G S ++
Sbjct: 290 YLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAI 349
Query: 348 VGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLT 407
++ SC++ LG +H + L+ G+ + A ++LI MY KC ++ S+ +FE +
Sbjct: 350 ASVVASCAQLGSFDLGASVHGYVLRHGYTLDTP-ALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 408 KRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGL------MPDEVTFSTTLKALSVSAS 461
+R L N++++ G Q+V L++ E + D T + L+A S++
Sbjct: 409 ERDLVSWNAIIS-----GYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQA--CSSA 461
Query: 462 ATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMI 521
+L+HC ++S + + V +L+D YS+CG++E + + F+++S + + + +I
Sbjct: 462 GALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILI 521
Query: 522 NGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
GY +G G L + + G++P+ + FL L+ C+H GMV++G +F SM GV
Sbjct: 522 AGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGV 581
Query: 582 QPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQ 641
+P+ H +C+VDLLCRA + + + +L +CR++ EV +
Sbjct: 582 EPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICE 641
Query: 642 VLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
++EL P D +++ + +A + +D E + + + G S IE+
Sbjct: 642 DMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEM 693
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 225/450 (50%), Gaps = 8/450 (1%)
Query: 123 EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL 182
+Q L + M + + TF S+L CA G+ +H +V+ GF S+ ++ +L
Sbjct: 28 KQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSL 87
Query: 183 VGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNG 242
V Y GL AR++F+E+ ER++ W ++ + G V E+ + + M F G++P
Sbjct: 88 VNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP 147
Query: 243 VTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFE 302
VT LL++ S + + + L + GF + +I V N++++ Y C + AK F+
Sbjct: 148 VT---LLEMLSGVLEITQLQCLHDFAVIYGF-DCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 303 AIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
+ +++SWN+++S A + + L+L M+ G P ++ L+ ++ +
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLS 422
G+ +HC +K GFD +H ++ALI MY KC E+S V E++ + + C +++ L
Sbjct: 264 GRMLHCQIVKTGFDV-DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLM 322
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGD 482
G + + +F M+ G D + + S + +F +H + L+ G D
Sbjct: 323 RLGRAEKALIVFSEMLQSG--SDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVE 542
SL+ Y++CGH++ SL IFE ++ + + + ++I+GYA+N + L + M
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 543 KGLKP-DEITFLCALTGCNHTGMVKEGRIL 571
K ++ D T + L C+ G + G+++
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLI 470
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 7/218 (3%)
Query: 415 NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFA 474
NS + LS G + V+ F M+ L+PD TF + LKA + +F S +H
Sbjct: 15 NSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS--IHQQV 72
Query: 475 LKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGL 534
L +G D ++ SL++ Y++ G + + ++FE + + + +T+MI Y+R G+ +
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 535 AVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDL 594
++++ M +G+KP +T L L+G + + + L D ++G D + M++L
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLE---ITQLQCLHD-FAVIYGFDCDIAVMNSMLNL 188
Query: 595 LCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKN 632
C+ Q ++RD W++++ S N
Sbjct: 189 YCKCDHVGDAKDLFDQM-EQRDMVSWNTMISGYASVGN 225
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 281/584 (48%), Gaps = 43/584 (7%)
Query: 143 TFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL 202
TF +L CA+ G +G +H +VVK GF +VF LV Y+ V A ++ DE+
Sbjct: 33 TFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM 92
Query: 203 PERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGK 262
PER +A N + G E G ++ + G N VT +L C + + G
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---IEGGM 149
Query: 263 KLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADN 322
+L +K GF E ++V +LV YS CG V A + FE +P ++V+++N+ +S +N
Sbjct: 150 QLHCLAMKSGF-EMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 323 DLLCDALELFTVMQLW-GQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
++ +F +M+ + + P+ + V + +C+ + G+Q+H +K F +
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF-QFETM 267
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTK-RTLECCNSLMTSLSHCGATQDVVELFGLMIDE 440
+ALIDMY KC +S+ VF L R L NS+++ + G + VELF + E
Sbjct: 268 VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSE 327
Query: 441 GLMPDEVTFST----------------------------TLKALSVSASA-----TFTSS 467
GL PD T+++ +LK L+ SA T +
Sbjct: 328 GLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNG 387
Query: 468 QLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL--SSPNAICFTSMINGYA 525
+ +H +K+ E D V SL+D Y +CG + +IF+ + + + MI+GY
Sbjct: 388 KEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYG 447
Query: 526 RNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQ 585
++G + + + + E+ ++P TF L+ C+H G V++G +F M+ +G +P
Sbjct: 448 KHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPST 507
Query: 586 RHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVE 645
H CM+DLL R+G Q + SSLL SCR H + +G AA L E
Sbjct: 508 EHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAE 566
Query: 646 LDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHS 689
L+P++PA ++ S+ YA + ++ IR+V +++ + G S
Sbjct: 567 LEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 206/477 (43%), Gaps = 53/477 (11%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYN-----LLISAWCFPPEQALHLYGE 131
V+T + ++K + + AL V MP R + N LL + +C A ++G+
Sbjct: 66 VFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFC---RDAFRMFGD 122
Query: 132 MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
+ G S T +SVL C G G+Q+HC +K GF V+VG +LV Y G
Sbjct: 123 ARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGE 179
Query: 192 REVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM-CFDGVEPNGVTFCYLLK 250
+A +F+++P +++ +N + G E G + + ++ M F EPN VTF +
Sbjct: 180 WVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAIT 239
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF-EAIPVENV 309
C++ L G++L ++K F + V AL+D YS C C A F E N+
Sbjct: 240 ACASLLNLQYGRQLHGLVMKKEF-QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNL 298
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQLWG------------------------------ 339
ISWNS++S N A+ELF + G
Sbjct: 299 ISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFER 358
Query: 340 -----QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
PS++ L LL++CS + GK+IH H +K E + ++LIDMY KC
Sbjct: 359 MLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAA-AERDIFVLTSLIDMYMKCG 417
Query: 395 DIESSVAVFESLTKRTLECC--NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTT 452
+ +F+ + + N +++ G + +E+F L+ +E + P TF+
Sbjct: 418 LSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAV 477
Query: 453 LKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL 509
L A S + SQ+ + G + ++D R G + + ++ + +
Sbjct: 478 LSACSHCGNVE-KGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 202/453 (44%), Gaps = 24/453 (5%)
Query: 240 PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKK 299
PN TF LLK C+ + +G+ L + ++K GF ++F A ALV Y + A K
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFF-VDVFTATALVSMYMKVKQVTDALK 87
Query: 300 SFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
+ +P + S N+ VS +N DA +F ++ G + ++ +L C E
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG 147
Query: 360 IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMT 419
G Q+HC A+K GF E V+ ++L+ MY +C + + +FE + +++ N+ ++
Sbjct: 148 ---GMQLHCLAMKSGF-EMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 420 SLSHCGATQDVVELFGLMID-EGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSG 478
L G V +F LM P++VTF + A ++ + LH +K
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITA--CASLLNLQYGRQLHGLVMKKE 261
Query: 479 VEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGLAVL 537
+ + V +L+D YS+C + + +F L + N I + S+I+G NG + + +
Sbjct: 262 FQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELF 321
Query: 538 HAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR 597
+ +GLKPD T+ ++G + G V E F+ M SV V C+ LL
Sbjct: 322 EKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVP----SLKCLTSLLSA 377
Query: 598 AGXX------XXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVL--VELDPD 649
+ +RD F+ +SL+ + + + A ++ E P
Sbjct: 378 CSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLI---DMYMKCGLSSWARRIFDRFEPKPK 434
Query: 650 DPAVWLQASNFYAEIGNFDASREIREVALARKM 682
DP W + Y + G +++ EI E+ K+
Sbjct: 435 DPVFWNVMISGYGKHGECESAIEIFELLREEKV 467
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 150/338 (44%), Gaps = 27/338 (7%)
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
SP+ + LL SC++ ++ G+ +H +K GF V +AL+ MY K + +
Sbjct: 27 HSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFV-DVFTATALVSMYMKVKQVTDA 85
Query: 400 VAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
+ V + + +R + N+ ++ L G +D +FG G + VT ++ L
Sbjct: 86 LKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVL-----G 140
Query: 460 ASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTS 519
LHC A+KSG E + V SL+ YSRCG L+ ++FE + + + + +
Sbjct: 141 GCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNA 200
Query: 520 MINGYARNGMGKQGLAVLHAMVE-KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSV 578
I+G NG+ +V + M + +P+++TF+ A+T C ++ GR L
Sbjct: 201 FISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQL------- 253
Query: 579 HG-VQPDQRHFSCMV-----DLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKN 632
HG V + F MV D+ + + D R+ W+S++ +
Sbjct: 254 HGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ 313
Query: 633 EEVGTRAAQVLVELDPD----DPAVWLQASNFYAEIGN 666
E A ++ +LD + D A W + ++++G
Sbjct: 314 HET---AVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 263/516 (50%), Gaps = 24/516 (4%)
Query: 181 TLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEP 240
L+ Y GL E AR LFDE+P+R++ W ++ G+ + + M G P
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 241 NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSAC------GCL 294
N T +LK C N + L G + ++K+G +E +++V NA+++ Y+ C CL
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLG-MEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 295 VGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSC 354
+ F I V+N ++W +L++ L+++ M L + + + +
Sbjct: 169 I-----FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 355 SRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC 414
+ + + GKQIH +K GF + ++ ++++D+Y +C + + F + + L
Sbjct: 224 ASIDSVTTGKQIHASVIKRGF-QSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITW 282
Query: 415 NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFA 474
N+L++ L +++ ++ +F +G +P+ TF++ + A + A Q LH
Sbjct: 283 NTLISELERSDSSEALL-MFQRFESQGFVPNCYTFTSLVAA--CANIAALNCGQQLHGRI 339
Query: 475 LKSGVEGDAAVACSLMDAYSRCGHVELSLQIF-ETLSSPNAICFTSMINGYARNGMGKQG 533
+ G + +A +L+D Y++CG++ S ++F E + N + +TSM+ GY +G G +
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA 399
Query: 534 LAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVD 593
+ + MV G++PD I F+ L+ C H G+V++G F+ M+S +G+ PD+ ++C+VD
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459
Query: 594 LLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTR-AAQVLVELDPDDPA 652
LL RAG + P K D W ++L +C++HK+ + +R AA+ ++EL P
Sbjct: 460 LLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVG 519
Query: 653 VWLQASNFYAEIGNFDASREIREVALARKMTREIGH 688
++ S YA G + + A RKM R +G+
Sbjct: 520 TYVMLSYIYAAEGKW------VDFARVRKMMRMMGN 549
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 204/451 (45%), Gaps = 12/451 (2%)
Query: 65 QTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP-- 122
T P P I ++ + + A ++F MP RD V + +I+ +
Sbjct: 33 NTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYN 92
Query: 123 EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL 182
+A + EM G T SSVL C G VH VVK G +++V +
Sbjct: 93 ARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAM 152
Query: 183 VGFYLNVGLR-EVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPN 241
+ Y + E A +F ++ +N W L+ GF LG L Y +M + E
Sbjct: 153 MNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVT 212
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
++ ++ + GK++ + ++K GF +SN+ V N+++D Y CG L AK F
Sbjct: 213 PYCITIAVRASASIDSVTTGKQIHASVIKRGF-QSNLPVMNSILDLYCRCGYLSEAKHYF 271
Query: 302 EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
+ +++I+WN+L+S +D +AL +F + G P+ + L+ +C+ +
Sbjct: 272 HEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALN 330
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVF-ESLTKRTLECCNSLMTS 420
G+Q+H + GF++ +V +ALIDMY KC +I S VF E + +R L S+M
Sbjct: 331 CGQQLHGRIFRRGFNK-NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIG 389
Query: 421 LSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS--G 478
G + VELF M+ G+ PD + F + LS A L + ++S G
Sbjct: 390 YGSHGYGAEAVELFDKMVSSGIRPDRIVF---MAVLSACRHAGLVEKGLKYFNVMESEYG 446
Query: 479 VEGDAAVACSLMDAYSRCGHVELSLQIFETL 509
+ D + ++D R G + + ++ E +
Sbjct: 447 INPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 166/356 (46%), Gaps = 9/356 (2%)
Query: 277 NIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ 336
+I N +V ++ G + A+ F+ +P +V++W ++++ A ++ A E F M
Sbjct: 45 HILATNLIVSYFEK-GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 337 LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS-D 395
G SP+ +L +L SC + + G +H +KLG EGS++ +A+++MY CS
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGM-EGSLYVDNAMMNMYATCSVT 162
Query: 396 IESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
+E++ +F + + +L+T +H G ++++ M+ E EVT A
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENA---EVTPYCITIA 219
Query: 456 LSVSASA-TFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNA 514
+ SAS + T+ + +H +K G + + V S++D Y RCG++ + F + +
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 515 ICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDS 574
I + ++I+ R+ + L + +G P+ TF + C + + G+ L
Sbjct: 280 ITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 575 MKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSH 630
+ G + + ++D+ + G + D+R+ W+S++ SH
Sbjct: 339 IFR-RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSH 393
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW-CFPPEQALHLYGEMGLLGIRE 139
N +D + + L+ A FH M +D +T+N LIS +AL ++ G
Sbjct: 252 NSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVP 311
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
TF+S++A CA G Q+H R+ + GF NV + L+ Y G ++ +F
Sbjct: 312 NCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVF 371
Query: 200 DELPE-RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
E+ + RNL W ++ G+ G E++ + +M G+ P+ + F +L C + +
Sbjct: 372 GEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLV 431
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
+G K + + + + + N +VD G + A + E +P
Sbjct: 432 EKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 162/552 (29%), Positives = 259/552 (46%), Gaps = 29/552 (5%)
Query: 158 REGVQVHCRVVK-FGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRG 216
R G VH R+VK F+ L+ Y + E AR + P RN+ W L+ G
Sbjct: 23 RLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 217 FCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVES 276
+ G +L + M +GV PN TF K ++ R GK++ + +K G +
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI-L 141
Query: 277 NIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ 336
++FV + D Y A+K F+ IP N+ +WN+ +S + + +A+E F +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 337 LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
P+ + LN+CS + LG Q+H L+ GFD V + LID YGKC I
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT-DVSVCNGLIDFYGKCKQI 260
Query: 397 ESSVAVFESL-TKRTLECCNSLMT----------SLSHCGATQDVVELFGLMIDEGLMPD 445
SS +F + TK + C+ + S+ + + +D+VE MI
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI------- 313
Query: 446 EVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQI 505
S+ L A + A S +H A+K+ VE V +L+D Y +CG +E S Q
Sbjct: 314 ----SSVLSACAGMAGLELGRS--IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 506 FETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGL--KPDEITFLCALTGCNHTG 563
F+ + N + S+I GYA G LA+ M +G P+ +TF+ L+ C+ G
Sbjct: 368 FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427
Query: 564 MVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSL 623
V+ G +FDSM+S +G++P H+SC+VD+L RAG + P + +W +L
Sbjct: 428 AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Query: 624 LRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMT 683
+CR H ++G AA+ L +LDP D + SN +A G + + +RE +
Sbjct: 488 QNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIK 547
Query: 684 REIGHSSIEIRQ 695
+ G+S I ++
Sbjct: 548 KGAGYSWITVKN 559
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 216/479 (45%), Gaps = 20/479 (4%)
Query: 65 QTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE- 123
+T +P P + N I+ + K SA V P R+ V++ LIS
Sbjct: 34 KTLDSPPPP----FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHF 89
Query: 124 -QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL 182
AL + EM G+ TF A G Q+H VK G + +VFVG +
Sbjct: 90 STALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSA 149
Query: 183 VGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNG 242
Y LR+ AR+LFDE+PERNL WN + G E++ + PN
Sbjct: 150 FDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS 209
Query: 243 VTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFE 302
+TFC L CS+ LN G +L +L+ GF ++++ V N L+DFY C + ++ F
Sbjct: 210 ITFCAFLNACSDWLHLNLGMQLHGLVLRSGF-DTDVSVCNGLIDFYGKCKQIRSSEIIFT 268
Query: 303 AIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRS----LVGLLNSCSRAE 358
+ +N +SW SLV+ N E +V+ L + V + + +L++C+
Sbjct: 269 EMGTKNAVSWCSLVAAYVQN----HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMA 324
Query: 359 EIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLM 418
+ LG+ IH HA+K E ++ SAL+DMYGKC IE S F+ + ++ L NSL+
Sbjct: 325 GLELGRSIHAHAVKACV-ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383
Query: 419 TSLSHCGATQDVVELFGLMIDEGL--MPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
+H G + LF M G P+ +TF + L A S A A ++
Sbjct: 384 GGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS-RAGAVENGMKIFDSMRST 442
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGL 534
G+E A ++D R G VE + + + + P + ++ N +G + GL
Sbjct: 443 YGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/527 (28%), Positives = 265/527 (50%), Gaps = 12/527 (2%)
Query: 175 NVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC 234
NVF +V Y +AR+LFDE+P+ + +N L+ G+ + ++ + RM
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 235 FDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCL 294
G E +G T L+ C + R++ K+L C G +S V NA V +YS G L
Sbjct: 133 KLGFEVDGFTLSGLIAACCD--RVDLIKQLH-CFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 295 VGAKKSFEAI-PVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNS 353
A F + + + +SWNS++ + AL L+ M G + +L +LN+
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 354 CSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMY---GKCSDIESSVAVFESLTKRT 410
+ + + G+Q H +K GF + S H S LID Y G C + S VF+ +
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNS-HVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 411 LECCNSLMTSLS-HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQL 469
L N++++ S + +++ V+ F M G PD+ +F A S +S + +
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPS--QCKQ 366
Query: 470 LHCFALKSGVEGD-AAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNG 528
+H A+KS + + +V +L+ Y + G+++ + +F+ + NA+ F MI GYA++G
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 529 MGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHF 588
G + L + M++ G+ P++ITF+ L+ C H G V EG+ F++MK ++P+ H+
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 589 SCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDP 648
SCM+DLL RAG P K W++LL +CR HKN + RAA L+ + P
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQP 546
Query: 649 DDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIRQ 695
++ +N YA+ ++ +R+ +++ ++ G S IE+++
Sbjct: 547 LAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKK 593
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 217/472 (45%), Gaps = 17/472 (3%)
Query: 59 FSFIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW 118
S+ RA +T P+ V++ N + A+ K ++ A +F +P DTV+YN LIS +
Sbjct: 59 LSYARAAFYST-EEPN--VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGY 115
Query: 119 CFPPE--QALHLYGEMGLLGIRETSTTFSSVLAV-CARSGFHREGVQVHCRVVKFGFLSN 175
E A+ L+ M LG T S ++A C R + Q+HC V GF S
Sbjct: 116 ADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIK---QLHCFSVSGGFDSY 172
Query: 176 VFVGGTLVGFYLNVGLREVARELFDELPE-RNLAVWNVLLRGFCELGCVEESLNYYSRMC 234
V V +Y GL A +F + E R+ WN ++ + + ++L Y M
Sbjct: 173 SSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMI 232
Query: 235 FDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCL 294
F G + + T +L ++ L G++ ++K GF N V + L+DFYS CG
Sbjct: 233 FKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF-HQNSHVGSGLIDFYSKCGGC 291
Query: 295 VG---AKKSFEAIPVENVISWNSLVSVNADNDLLC-DALELFTVMQLWGQSPSVRSLVGL 350
G ++K F+ I +++ WN+++S + N+ L +A++ F MQ G P S V +
Sbjct: 292 DGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 351 LNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRT 410
++CS KQIH A+K + +ALI +Y K +++ + VF+ + +
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELN 411
Query: 411 LECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLL 470
N ++ + G + + L+ M+D G+ P+++TF L A + +
Sbjct: 412 AVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVD-EGQEYF 470
Query: 471 HCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMI 521
+ +E +A ++D R G +E + + + + P ++ + +++
Sbjct: 471 NTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 146/292 (50%), Gaps = 10/292 (3%)
Query: 275 ESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTV 334
E N+F N +V Y+ + A++ F+ IP + +S+N+L+S AD A+ LF
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 335 MQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
M+ G +L GL+ +C + + L KQ+HC ++ GFD S +A + Y K
Sbjct: 131 MRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYS-SVNNAFVTYYSKGG 187
Query: 395 DIESSVAVFESLTKRTLECC-NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL 453
+ +V+VF + + E NS++ + + L+ MI +G D T ++ L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 454 KALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE---LSLQIFETLS 510
AL ++ + H +K+G ++ V L+D YS+CG + S ++F+ +
Sbjct: 248 NAL--TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 511 SPNAICFTSMINGYARN-GMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNH 561
SP+ + + +MI+GY+ N + ++ + M G +PD+ +F+C + C++
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/617 (25%), Positives = 295/617 (47%), Gaps = 41/617 (6%)
Query: 63 RAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP- 121
+ Q+ +P ++ NR I+A+ K ++ A +F MP RD ++N +I+A C
Sbjct: 82 KVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITA-CAQN 140
Query: 122 --PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVG 179
++ ++ M G+R T T+F+ VL C R Q+HC VVK+G+ NV +
Sbjct: 141 GVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLE 200
Query: 180 GTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE 239
++V Y + AR +FDE+ + WNV++R + E+G +E++ + +M V
Sbjct: 201 TSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVR 260
Query: 240 PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKK 299
P T ++ CS L GK + + +K+ V + V+ ++ D Y C L A++
Sbjct: 261 PLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTV-VSTSVFDMYVKCDRLESARR 319
Query: 300 SFEA-------------------------------IPVENVISWNSLVSVNADNDLLCDA 328
F+ +P N++SWN+++ +A
Sbjct: 320 VFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEA 379
Query: 329 LELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALID 388
L+ T+M+ ++ +LV +LN CS ++ +GKQ H + G+D + A +AL+D
Sbjct: 380 LDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVA-NALLD 438
Query: 389 MYGKCSDIESSVAVFESLTK-RTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEV 447
MYGKC ++S+ F +++ R N+L+T ++ G ++ + F M E P +
Sbjct: 439 MYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKY 497
Query: 448 TFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFE 507
T +T L + + + +H F ++ G + D + +++D YS+C + ++++F+
Sbjct: 498 TLATLLAGCANIPALNLGKA--IHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFK 555
Query: 508 TLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKE 567
++ + I + S+I G RNG K+ + + +G+KPD +TFL L C G V+
Sbjct: 556 EAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVEL 615
Query: 568 GRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSC 627
G F SM + + + P H+ CM++L C+ G P M + + +C
Sbjct: 616 GFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDAC 675
Query: 628 RSHKNEEVGTRAAQVLV 644
+ ++ ++G AA+ L+
Sbjct: 676 QRYRWSKLGAWAAKRLM 692
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 231/525 (44%), Gaps = 40/525 (7%)
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
+ + C+ + +V +V F L +F+ + Y G + ARELF+E+P
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKK 263
ER+ WN ++ + G +E + RM DGV +F +LK C L ++
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 264 LQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADND 323
L ++K G+ N+ + ++VD Y C + A++ F+ I + +SWN +V +
Sbjct: 184 LHCAVVKYGY-SGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMG 242
Query: 324 LLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ 383
+A+ +F M P ++ ++ +CSR+ + +GK IH A+KL +V
Sbjct: 243 FNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTV-VS 301
Query: 384 SALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLM 443
+++ DMY KC +ES+ VF+ + L+ S M+ + G T++ ELF LM + ++
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 444 P--------------DEVTFSTTLKALSVSASATFTSSQLL---------------HCFA 474
DE TL + T +L H F
Sbjct: 362 SWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFI 421
Query: 475 LKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS-PNAICFTSMINGYARNGMGKQG 533
+ G + + VA +L+D Y +CG ++ + F +S + + + +++ G AR G +Q
Sbjct: 422 YRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Query: 534 LAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVD 593
L+ M + KP + T L GC + + G+ + + G + D MVD
Sbjct: 482 LSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIR-DGYKIDVVIRGAMVD 539
Query: 594 LL--CRAGXXXXXXXXXXQTPDKRDCFMWSSLLRS-CRSHKNEEV 635
+ CR T RD +W+S++R CR+ +++EV
Sbjct: 540 MYSKCRCFDYAIEVFKEAAT---RDLILWNSIIRGCCRNGRSKEV 581
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 265/570 (46%), Gaps = 47/570 (8%)
Query: 121 PPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGG 180
P L L + L + S+T +L+ R+ E Q H ++K G + F
Sbjct: 16 PQAYNLRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSAS 75
Query: 181 TLVGFY-LNVGLREV--ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG 237
LV F N + V A + + + N N ++R + E +L + M
Sbjct: 76 KLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP 135
Query: 238 VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGA 297
V P+ +F ++LK C+ EG+++ +K G V +++FV N LV+ Y G A
Sbjct: 136 VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLV-TDVFVENTLVNVYGRSGYFEIA 194
Query: 298 KKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRA 357
+K + +PV + +SWNSL+S + L+ +A LF M+
Sbjct: 195 RKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME--------------------- 233
Query: 358 EEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSL 417
E +V + + +I Y ++ + VF+S+ R + N++
Sbjct: 234 -------------------ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAM 274
Query: 418 MTSLSHCGATQDVVELFGLMIDEGL-MPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
+T+ +H G +V+E+F M+D+ PD T + L A ++ + + + +H + K
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSA--CASLGSLSQGEWVHVYIDK 332
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAV 536
G+E + +A +L+D YS+CG ++ +L++F S + + S+I+ + +G+GK L +
Sbjct: 333 HGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEI 392
Query: 537 LHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLC 596
MV +G KP+ ITF+ L+ CNH GM+ + R LF+ M SV+ V+P H+ CMVDLL
Sbjct: 393 FSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLG 452
Query: 597 RAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQ 656
R G + P + SLL +C+ E R A L+EL+ D + + Q
Sbjct: 453 RMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQ 512
Query: 657 ASNFYAEIGNFDASREIREVALARKMTREI 686
SN YA G ++ + R A ++ R +
Sbjct: 513 MSNLYASDGRWEKVIDGRRNMRAERVNRSL 542
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 9/233 (3%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW----CFPPEQALHLYGEMGLLG 136
N I + + + A VF +MP+RD V++N +++A+ C+ + L ++ +M L
Sbjct: 241 NFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCY--NEVLEVFNKM-LDD 297
Query: 137 IRETSTTFS--SVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
E F+ SVL+ CA G +G VH + K G F+ LV Y G +
Sbjct: 298 STEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDK 357
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A E+F +R+++ WN ++ G +++L +S M ++G +PNG+TF +L C++
Sbjct: 358 ALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNH 417
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
L++ +KL + + VE I +VD G + A++ IP +
Sbjct: 418 VGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPAD 470
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 166/569 (29%), Positives = 276/569 (48%), Gaps = 47/569 (8%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE---VARELF-DELPERNLAVWNVLLRGF 217
QV ++++F + + F L+ F+ + E +A+ LF + P N+ V+N ++
Sbjct: 52 QVLAQIMRFNLICDTFPMSRLI-FFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAV 110
Query: 218 CELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESN 277
E YS M V P+ TF YL+K S L+E K++ I+ G +
Sbjct: 111 SS--SKNECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVKQIHCHIIVSGCLSLG 165
Query: 278 IFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQL 337
++ N+LV FY G A+K F +P +V S+N ++ A +AL+L+ M
Sbjct: 166 NYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVS 225
Query: 338 WGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG-FDEGSVHAQSALIDMYGKCS-- 394
G P +++ LL C +I LGK +H + G ++ +AL+DMY KC
Sbjct: 226 DGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKES 285
Query: 395 -----------------------------DIESSVAVFESLTKRTLECCNSLMTSLSHCG 425
D+E++ AVF+ + KR L NSL+ S G
Sbjct: 286 GLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG 345
Query: 426 ATQDVV-ELFGLM-IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDA 483
Q V ELF M I E + PD VT + + + + + + +H ++ ++GDA
Sbjct: 346 CDQRTVRELFYEMTIVEKVKPDRVTMVSLISG--AANNGELSHGRWVHGLVIRLQLKGDA 403
Query: 484 AVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEK 543
++ +L+D Y +CG +E + +F+T + + +TSMI G A +G G+Q L + M E+
Sbjct: 404 FLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEE 463
Query: 544 GLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXX 603
G+ P+ +T L LT C+H+G+V+EG +F+ MK G P+ H+ +VDLLCRAG
Sbjct: 464 GVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEE 523
Query: 604 XX-XXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYA 662
+ P + MW S+L +CR ++ E A L++L+P+ ++ SN YA
Sbjct: 524 AKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYA 583
Query: 663 EIGNFDASREIREVALARKMTREIGHSSI 691
+G + S + RE R + + G+SS+
Sbjct: 584 TVGRWGYSDKTREAMENRGVKKTAGYSSV 612
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 46/451 (10%)
Query: 95 SALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARS 154
+ L + P + YN +ISA + LY M + TF L + S
Sbjct: 87 AKLLFLNFTPNPNVFVYNTMISAVSSSKNECFGLYSSMIRHRVSPDRQTF---LYLMKAS 143
Query: 155 GFHREGVQVHCRVVKFGFLS-NVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVL 213
F E Q+HC ++ G LS ++ +LV FY+ +G VA ++F +P +++ +NV+
Sbjct: 144 SFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVM 203
Query: 214 LRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGF 273
+ G+ + G E+L Y +M DG+EP+ T LL C + + GK + I + G
Sbjct: 204 IVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGP 263
Query: 274 V-ESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV---------------- 316
V SN+ ++NAL+D Y C AK++F+A+ +++ SWN++V
Sbjct: 264 VYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVF 323
Query: 317 ------SVNADNDLL-------CD---ALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEE 359
+ + N LL CD ELF M + + P ++V L++ + E
Sbjct: 324 DQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGE 383
Query: 360 IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMT 419
+ G+ +H ++L +G SALIDMY KC IE + VF++ T++ + S++T
Sbjct: 384 LSHGRWVHGLVIRLQL-KGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMIT 442
Query: 420 SLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCF---ALK 476
L+ G Q ++LFG M +EG+ P+ VT L A S S + LH F K
Sbjct: 443 GLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLV----EEGLHVFNHMKDK 498
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFE 507
G + + SL+D R G VE + I +
Sbjct: 499 FGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 4/185 (2%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP---PEQALHLYGEMGLL-G 136
N + F++ D+ +A AVF MP RD V++N L+ + L+ EM ++
Sbjct: 304 NTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK 363
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
++ T S+++ A +G G VH V++ + F+ L+ Y G+ E A
Sbjct: 364 VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF 423
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
+F E+++A+W ++ G G +++L + RM +GV PN VT +L CS+
Sbjct: 424 MVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSG 483
Query: 257 RLNEG 261
+ EG
Sbjct: 484 LVEEG 488
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 243/492 (49%), Gaps = 42/492 (8%)
Query: 239 EPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAK 298
+P T+C L++VCS R L EGKK+ I GFV I + N L+ Y+ CG LV A+
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFV-PGIVIWNRLLRMYAKCGSLVDAR 140
Query: 299 KSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAE 358
K F+ +P ++ SWN +V+ A+ LL +A +LF M + G + E
Sbjct: 141 KVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEE 200
Query: 359 EIGL--------------------------------GKQIHCHALKLGFDEGSVHAQSAL 386
+ L GK+IH H ++ G D V S+L
Sbjct: 201 ALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV-LWSSL 259
Query: 387 IDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDE 446
+DMYGKC I+ + +F+ + ++ + S++ ++ LF ++ P+E
Sbjct: 260 MDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNE 319
Query: 447 VTFSTTLKALSVSASATFTSSQL---LHCFALKSGVEGDAAVACSLMDAYSRCGHVELSL 503
TF+ L +A A T+ +L +H + + G + + + SL+D Y++CG++E +
Sbjct: 320 YTFAGVL-----NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAK 374
Query: 504 QIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG 563
+ + P+ + +TS+I G A+NG + L +++ G KPD +TF+ L+ C H G
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
Query: 564 MVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSL 623
+V++G F S+ H + H++C+VDLL R+G + P K F+W+S+
Sbjct: 435 LVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Query: 624 LRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMT 683
L C ++ N ++ AAQ L +++P++P ++ +N YA G ++ ++R+ +T
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
Query: 684 REIGHSSIEIRQ 695
+ G S EI++
Sbjct: 555 KRPGSSWTEIKR 566
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 224/500 (44%), Gaps = 83/500 (16%)
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
+ ++T+ +++ VC+++ EG +VH + GF+ + + L+ Y G AR+
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC--------------FDGVEPNGV 243
+FDE+P R+L WNV++ G+ E+G +EE+ + M +P
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 244 TFCY-LLKVCSNHRR-----------------LNEGKKLQSCILKMGFVESNIFVANALV 285
Y L++ N R + GK++ I++ G ++S+ + ++L+
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAG-LDSDEVLWSSLM 260
Query: 286 DFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVR 345
D Y CGC+ A+ F+ I ++V+SW S++ + + LF+ + + P+
Sbjct: 261 DMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEY 320
Query: 346 SLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFES 405
+ G+LN+C+ LGKQ+H + ++GFD S A S+L+DMY KC +IES+ V +
Sbjct: 321 TFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF-ASSSLVDMYTKCGNIESAKHVVDG 379
Query: 406 LTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFT 465
K L SL+ + G + ++ F L++ G PD VTF L A
Sbjct: 380 CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC--------- 430
Query: 466 SSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTS-----M 520
+ G VE L+ F +++ + + TS +
Sbjct: 431 ----------------------------THAGLVEKGLEFFYSITEKHRLSHTSDHYTCL 462
Query: 521 INGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHG 580
++ AR+G +Q +V+ M +KP + + L GC+ G + + ++ + +
Sbjct: 463 VDLLARSGRFEQLKSVISEM---PMKPSKFLWASVLGGCSTYGNID---LAEEAAQELFK 516
Query: 581 VQPDQR-HFSCMVDLLCRAG 599
++P+ + M ++ AG
Sbjct: 517 IEPENPVTYVTMANIYAAAG 536
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 15/262 (5%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLI------SAWCFPPEQALHLYGEMGLLGI 137
+D + K ++ A +F + +D V++ +I S W + L+ E+
Sbjct: 260 MDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW----REGFSLFSELVGSCE 315
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
R TF+ VL CA G QVH + + GF F +LV Y G E A+
Sbjct: 316 RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
+ D P+ +L W L+ G + G +E+L Y+ + G +P+ VTF +L C++
Sbjct: 376 VVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGL 435
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
+ +G + I + + LVD + G K +P++ + W S++
Sbjct: 436 VEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVL 495
Query: 317 ---SVNADNDLLCDAL-ELFTV 334
S + DL +A ELF +
Sbjct: 496 GGCSTYGNIDLAEEAAQELFKI 517
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 146/544 (26%), Positives = 262/544 (48%), Gaps = 55/544 (10%)
Query: 158 REGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV---ARELFDELPERNLAVWNVLL 214
R Q+H +K+G ++ + G L+ + + + + AR L PE + ++N L+
Sbjct: 19 RALTQIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCFPEPDAFMFNTLV 77
Query: 215 RGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGF 273
RG+ E S+ + M G V P+ +F +++K N R L G ++ LK G
Sbjct: 78 RGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHG- 136
Query: 274 VESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFT 333
+ES++FV L+ Y CGC+ A+K F+ + N+++WN++++
Sbjct: 137 LESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVIT---------------- 180
Query: 334 VMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSA---LIDMY 390
+C R ++ ++I FD+ V ++ ++ Y
Sbjct: 181 -------------------ACFRGNDVAGAREI--------FDKMLVRNHTSWNVMLAGY 213
Query: 391 GKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFS 450
K ++ES+ +F + R ++++ ++H G+ + F + G+ P+EV+ +
Sbjct: 214 IKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLT 273
Query: 451 TTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS 510
L A S S S F ++LH F K+G +V +L+D YSRCG+V ++ +FE +
Sbjct: 274 GVLSACSQSGSFEF--GKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQ 331
Query: 511 SPNAIC-FTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGR 569
I +TSMI G A +G G++ + + + M G+ PD I+F+ L C+H G+++EG
Sbjct: 332 EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE 391
Query: 570 ILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRS 629
F MK V+ ++P+ H+ CMVDL R+G Q P +W +LL +C S
Sbjct: 392 DYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSS 451
Query: 630 HKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHS 689
H N E+ + Q L ELDP++ + SN YA G + IR+ + +++ + S
Sbjct: 452 HGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWS 511
Query: 690 SIEI 693
+E+
Sbjct: 512 LVEV 515
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 196/433 (45%), Gaps = 53/433 (12%)
Query: 104 PLRDTVTYNLLISAWCF--PPEQALHLYGEMGLLG-IRETSTTFSSVLAVCARSGFHREG 160
P D +N L+ + P ++ ++ EM G + S +F+ V+ R G
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 161 VQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCEL 220
Q+HC+ +K G S++FVG TL+G Y G E AR++FDE+ + NL WN ++
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITA---- 181
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
CF G + G + + NH N ++ G++++
Sbjct: 182 -------------CFRGNDVAGAREIFDKMLVRNHTSWN--------VMLAGYIKA---- 216
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
G L AK+ F +P + +SW++++ A N ++ F +Q G
Sbjct: 217 -----------GELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM 265
Query: 341 SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSV 400
SP+ SL G+L++CS++ GK +H K G+ V +ALIDMY +C ++ +
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYS-WIVSVNNALIDMYSRCGNVPMAR 324
Query: 401 AVFESLT-KRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
VFE + KR + S++ L+ G ++ V LF M G+ PD ++F + L A S +
Sbjct: 325 LVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHA 384
Query: 460 A---SATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQ-IFETLSSPNAI 515
S++ + ++ +E C ++D Y R G ++ + I + P AI
Sbjct: 385 GLIEEGEDYFSEMKRVYHIEPEIE---HYGC-MVDLYGRSGKLQKAYDFICQMPIPPTAI 440
Query: 516 CFTSMINGYARNG 528
+ +++ + +G
Sbjct: 441 VWRTLLGACSSHG 453
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 4/240 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIR 138
N + +IK+ +L SA +F MP RD V+++ +I ++ + E+ G+
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
+ + VL+ C++SG G +H V K G+ V V L+ Y G +AR +
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 199 FDELPERNLAV-WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
F+ + E+ V W ++ G G EE++ ++ M GV P+G++F LL CS+
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV-ENVISWNSLV 316
+ EG+ S + ++ +E I +VD Y G L A +P+ I W +L+
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 159/586 (27%), Positives = 283/586 (48%), Gaps = 31/586 (5%)
Query: 123 EQALHLYG-EMGLLGIRETSTTFSSVLAVCARSGFHRE----GVQVHCRVVKFGFLSNVF 177
++AL LY ++ LG + SV+ CA F +E G Q+HC +K G +
Sbjct: 27 DEALRLYKLKIHSLGTNGFTAILPSVIKACA---FQQEPFLLGAQLHCLCLKAGADCDTV 83
Query: 178 VGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG 237
V +L+ Y + R++FDE+ R+ + ++ C+ G + E++ M F G
Sbjct: 84 VSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYG 143
Query: 238 VEPNGVTFCYLLKVCSNHRRLNEGKKL----QSCILKMGFVESNIFVANALVDFYSACGC 293
P LL +C+ R+ K+ + +L ++ ++ ++ ALVD Y
Sbjct: 144 FIPKSELVASLLALCT---RMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 294 LVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNS 353
A F+ + V+N +SW +++S N ++LF MQ P+ +L+ +L +
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 354 CSRAEEIGLG----KQIHCHALKLG--FDEGSVHAQSALIDMYGKCSDIESSVAVFESLT 407
C E+ G K+IH + + G DE +A + MY +C ++ S +FE+
Sbjct: 261 CV---ELNYGSSLVKEIHGFSFRHGCHADE---RLTAAFMTMYCRCGNVSLSRVLFETSK 314
Query: 408 KRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSS 467
R + +S+++ + G +V+ L M EG+ + VT + A + S +F S+
Sbjct: 315 VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST 374
Query: 468 QLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARN 527
+H LK G + +L+D Y++CG + + ++F L+ + + ++SMIN Y +
Sbjct: 375 --VHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLH 432
Query: 528 GMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRH 587
G G + L + M++ G + D++ FL L+ CNH G+V+E + +F H + H
Sbjct: 433 GHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYH-MPVTLEH 491
Query: 588 FSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEV-GTRAAQVLVEL 646
++C ++LL R G P K +WSSLL +C +H +V G A L++
Sbjct: 492 YACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKS 551
Query: 647 DPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
+PD+PA ++ S + E GN+ A+ E+R V RK+ + G S IE
Sbjct: 552 EPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 179/411 (43%), Gaps = 17/411 (4%)
Query: 74 SDC-VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYG 130
+DC N I + K + VF M RDTV+Y +I++ C +A+ L
Sbjct: 78 ADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIK 137
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQV-HCRV-VKFGFLSNVFVGGTLVGFYLN 188
EM G S +S+LA+C R G + ++ H V V +V + LV YL
Sbjct: 138 EMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLK 197
Query: 189 VGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
A +FD++ +N W ++ G E ++ + M + + PN VT +
Sbjct: 198 FDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSV 257
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGF---VESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
L C LN G L I F ++ + A + Y CG + ++ FE
Sbjct: 258 LPACV---ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSK 314
Query: 306 VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ 365
V +V+ W+S++S A+ + + L M+ G + +L+ ++++C+ + +
Sbjct: 315 VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFAST 374
Query: 366 IHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG 425
+H LK GF + +ALIDMY KC + ++ VF LT++ L +S++ + G
Sbjct: 375 VHSQILKCGF-MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHG 433
Query: 426 ATQDVVELFGLMIDEGLMPDEVTFSTTLKA-----LSVSASATFTSSQLLH 471
+ +E+F MI G D++ F L A L A FT + H
Sbjct: 434 HGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYH 484
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 172/647 (26%), Positives = 298/647 (46%), Gaps = 92/647 (14%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQAL--HLYGEMGLLGIR 138
N I +++++ N AL VF MP +V+YN +IS + E L L+ EM
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP----- 122
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
E V V+ G++ N +G AREL
Sbjct: 123 --------------------ERDLVSWNVMIKGYVRNRNLGK--------------AREL 148
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
F+ +PER++ WN +L G+ + GCV+++ + + RM E N V++ LL + ++
Sbjct: 149 FEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKM 204
Query: 259 NEGKKL-----------QSCILKMGFVESNIFVA----------------NALVDFYSAC 291
E L +C+L GFV+ V N ++ Y+
Sbjct: 205 EEACMLFKSRENWALVSWNCLLG-GFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS 263
Query: 292 GCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLL 351
G + A++ F+ PV++V +W ++VS N ++ +A ELF M + S +L
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAML 319
Query: 352 NSCSRAEEIGLGKQIHCHALKLGFDE---GSVHAQSALIDMYGKCSDIESSVAVFESLTK 408
+ E + + K++ FD +V + +I Y +C I + +F+ + K
Sbjct: 320 AGYVQGERMEMAKEL--------FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 409 RTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASA-TFTSS 467
R +++ S G + + + LF M EG + +FS+ ALS A
Sbjct: 372 RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS---ALSTCADVVALELG 428
Query: 468 QLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARN 527
+ LH +K G E V +L+ Y +CG +E + +F+ ++ + + + +MI GY+R+
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 488
Query: 528 GMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRH 587
G G+ L +M +GLKPD+ T + L+ C+HTG+V +GR F +M +GV P+ +H
Sbjct: 489 GFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQH 548
Query: 588 FSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELD 647
++CMVDLL RAG P + D +W +LL + R H N E+ AA + ++
Sbjct: 549 YACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAME 608
Query: 648 PDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
P++ +++ SN YA G + ++R + + + G+S IEI+
Sbjct: 609 PENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQ 655
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 206/453 (45%), Gaps = 24/453 (5%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYG 130
P V + N + + ++ ++ A +VF MP ++ V++N L+SA+ E+A L+
Sbjct: 153 PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF- 211
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGF-LSNVFVGGTLVGFYLNV 189
++ ++ V C GF ++ V R + +V T++ Y
Sbjct: 212 --------KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQS 263
Query: 190 GLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLL 249
G + AR+LFDE P +++ W ++ G+ + VEE+ + +M E N V++ +L
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAML 319
Query: 250 KVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV 309
R+ K+L + N+ N ++ Y+ CG + AK F+ +P +
Sbjct: 320 AGYVQGERMEMAKELFDVMPC-----RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCH 369
+SW ++++ + + +AL LF M+ G + S L++C+ + LGKQ+H
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 370 ALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQD 429
+K G++ G +AL+ MY KC IE + +F+ + + + N+++ S G +
Sbjct: 435 LVKGGYETGCF-VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 430 VVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSL 489
+ F M EGL PD+ T L A S + Q + GV ++ +
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVD-KGRQYFYTMTQDYGVMPNSQHYACM 552
Query: 490 MDAYSRCGHVELSLQIFETLS-SPNAICFTSMI 521
+D R G +E + + + + P+A + +++
Sbjct: 553 VDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL 585
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/533 (27%), Positives = 253/533 (47%), Gaps = 37/533 (6%)
Query: 163 VHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGC 222
VH R++ N +G L+ Y ++ AR++FDE+PERN+ + NV++R + G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 223 VEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVAN 282
E + + MC V P+ TF +LK CS + G+K+ K+G S +FV N
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL-SSTLFVGN 179
Query: 283 ALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSP 342
LV Y CG L A+ + + +V+SWNSLV A N DALE+ M+ S
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH 239
Query: 343 SVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAV 402
++ LL + S + MY K +
Sbjct: 240 DAGTMASLLPAVSNTTTENV--------------------------MYVK--------DM 265
Query: 403 FESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASA 462
F + K++L N ++ + VEL+ M +G PD V+ ++ L A +++
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 463 TFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMIN 522
+ + +H + + + + + +L+D Y++CG +E + +FE + S + + +T+MI+
Sbjct: 326 SL--GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 523 GYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQ 582
Y +G G +A+ + + GL PD I F+ L C+H G+++EGR F M + +
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 583 PDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQV 642
P H +CMVDLL RAG + + +W +LL +CR H + ++G AA
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 643 LVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIRQ 695
L +L P+ ++ SN YA+ G ++ IR + ++ + + G S++E+ +
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 556
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 171/375 (45%), Gaps = 39/375 (10%)
Query: 86 AFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC---FPPEQALHLYGEMGLLGIRETST 142
A+ +D+ SA VF +P R+ + N++I ++ F E + ++G M +R
Sbjct: 83 AYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGE-GVKVFGTMCGCNVRPDHY 141
Query: 143 TFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL 202
TF VL C+ SG G ++H K G S +FVG LV Y G AR + DE+
Sbjct: 142 TFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 203 PERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGK 262
R++ WN L+ G+ + +++L M + + T LL SN N
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV-M 260
Query: 263 KLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADN 322
++ KMG KKS ++SWN ++ V N
Sbjct: 261 YVKDMFFKMG-------------------------KKS--------LVSWNVMIGVYMKN 287
Query: 323 DLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHA 382
+ +A+EL++ M+ G P S+ +L +C + LGK+IH + + ++
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLL 346
Query: 383 QSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGL 442
++ALIDMY KC +E + VFE++ R + +++++ G D V LF + D GL
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406
Query: 443 MPDEVTFSTTLKALS 457
+PD + F TTL A S
Sbjct: 407 VPDSIAFVTTLAACS 421
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 112/245 (45%), Gaps = 11/245 (4%)
Query: 99 VFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGF 156
+F M + V++N++I + P +A+ LY M G + + +SVL C +
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 157 HREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLR- 215
G ++H + + + N+ + L+ Y G E AR++F+ + R++ W ++
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 216 -GFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFV 274
GF GC +++ +S++ G+ P+ + F L CS+ L EG+ + +
Sbjct: 385 YGFSGRGC--DAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 275 ESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLVS---VNADNDL-LCDAL 329
+ +VD G + A + + + +E N W +L+ V++D D+ L A
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 330 ELFTV 334
+LF +
Sbjct: 503 KLFQL 507
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/640 (25%), Positives = 289/640 (45%), Gaps = 72/640 (11%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISA--------------WCFPPEQALHLY 129
I A+ ++ ++ A VF MP+R T +YN +I+A +C PE+ Y
Sbjct: 88 ISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSY 147
Query: 130 GEMGLLGIR------------ETSTTF-SSVLAVCARSGFHREGV-QVHCRVVKFGFLSN 175
M +R ET F SV + SG+ R G RV + +
Sbjct: 148 ATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE 207
Query: 176 VFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCF 235
V ++V Y +G AR LFD + ERN+ W ++ G+ + G E+ + RM
Sbjct: 208 VVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQ 267
Query: 236 DG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCL 294
+G V+ N T + K C + R EG ++ + +M +E ++F+ N+L+ YS G +
Sbjct: 268 EGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMP-LEFDLFLGNSLMSMYSKLGYM 326
Query: 295 VGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSC 354
AK F + ++ +SWNSL++ + +A ELF M
Sbjct: 327 GEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP------------------ 368
Query: 355 SRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC 414
GK + + + +I + +I V +F + ++
Sbjct: 369 --------GKDMV--------------SWTDMIKGFSGKGEISKCVELFGMMPEKDNITW 406
Query: 415 NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFA 474
+++++ G ++ + F M+ + + P+ TFS+ L A ++ A +H
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA--TASLADLIEGLQIHGRV 464
Query: 475 LKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGL 534
+K + D +V SL+ Y +CG+ + +IF +S PN + + +MI+GY+ NG GK+ L
Sbjct: 465 VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKAL 524
Query: 535 AVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDL 594
+ + G +P+ +TFL L+ C H G V G F SMKS + ++P H++CMVDL
Sbjct: 525 KLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDL 584
Query: 595 LCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVW 654
L R+G P K +W SLL + ++H ++ AA+ L+EL+PD +
Sbjct: 585 LGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPY 644
Query: 655 LQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
+ S Y+ IG I + ++++ ++ G S I ++
Sbjct: 645 VVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILK 684
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 252/512 (49%), Gaps = 68/512 (13%)
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACG--------------- 292
LL+ C + + L +GK + + GF N ++N L+ Y CG
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 293 ----------------CLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ 336
LV A+ F+++P +V+SWN++V A + L +AL + +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 337 LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
G + S GLL +C ++ ++ L +Q H L GF V + S +ID Y KC +
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCS-IIDAYAKCGQM 230
Query: 397 ESSVAVFESLTKRTLECCNSLMTSLSHCGATQ---------------------------- 428
ES+ F+ +T + + +L++ + G +
Sbjct: 231 ESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQG 290
Query: 429 ---DVVELFGLMIDEGLMPDEVTFSTTLKALSVSAS-ATFTSSQLLHCFALKSGVEGDAA 484
++LF MI G+ P++ TFS+ L A SAS A+ + +H + +++ V +A
Sbjct: 291 SGNRALDLFRKMIALGVKPEQFTFSSCLCA---SASIASLRHGKEIHGYMIRTNVRPNAI 347
Query: 485 VACSLMDAYSRCGHVELSLQIFETLSSPNAICF-TSMINGYARNGMGKQGLAVLHAMVEK 543
V SL+D YS+ G +E S ++F + F +MI+ A++G+G + L +L M++
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 544 GLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXX 603
++P+ T + L C+H+G+V+EG F+SM HG+ PDQ H++C++DLL RAG
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 604 XXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAE 663
+ P + D +W+++L CR H NEE+G +AA L++LDP+ A ++ S+ YA+
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 664 IGNFDASREIREVALARKMTREIGHSSIEIRQ 695
G ++ ++R V R++ +E S IEI +
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEK 559
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 174/391 (44%), Gaps = 38/391 (9%)
Query: 165 CRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVE 224
C+V L N++ +V Y+ G+ AR +FD +PER++ WN ++ G+ + G +
Sbjct: 102 CKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLH 161
Query: 225 ESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANAL 284
E+L +Y G++ N +F LL C R+L ++ +L GF+ SN+ ++ ++
Sbjct: 162 EALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFL-SNVVLSCSI 220
Query: 285 VDFYSACGCLVGAKKSFEAIPVENVISWNSLVS-------VNADNDLLCD---------- 327
+D Y+ CG + AK+ F+ + V+++ W +L+S + A L C+
Sbjct: 221 IDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWT 280
Query: 328 --------------ALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL 373
AL+LF M G P + L + + + GK+IH + ++
Sbjct: 281 ALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT 340
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC--NSLMTSLSHCGATQDVV 431
++ S+LIDMY K +E+S VF + +C N+++++L+ G +
Sbjct: 341 NVRPNAI-VISSLIDMYSKSGSLEASERVFR-ICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 432 ELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMD 491
+ MI + P+ T L A S S + ++ G+ D L+D
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNACSHSGLVE-EGLRWFESMTVQHGIVPDQEHYACLID 457
Query: 492 AYSRCG-HVELSLQIFETLSSPNAICFTSMI 521
R G EL +I E P+ + +++
Sbjct: 458 LLGRAGCFKELMRKIEEMPFEPDKHIWNAIL 488
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 145/315 (46%), Gaps = 35/315 (11%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGL 134
+Y+ N + ++KS L A VF +MP RD V++N ++ + +AL Y E
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVF----------------- 177
GI+ +F+ +L C +S + Q H +V+ GFLSNV
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 178 --------------VGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCV 223
+ TL+ Y +G E A +LF E+PE+N W L+ G+ G
Sbjct: 233 AKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSG 292
Query: 224 EESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANA 283
+L+ + +M GV+P TF L ++ L GK++ +++ V N V ++
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN-VRPNAIVISS 351
Query: 284 LVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSP 342
L+D YS G L +++ F + + + WN+++S A + L AL + M + P
Sbjct: 352 LIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQP 411
Query: 343 SVRSLVGLLNSCSRA 357
+ +LV +LN+CS +
Sbjct: 412 NRTTLVVILNACSHS 426
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 145/360 (40%), Gaps = 64/360 (17%)
Query: 347 LVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESL 406
L LL C + + GK IH H GF + + LI MY KC + VF+ +
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 407 TKRTLECCNSLMTSLSHCG------------ATQDVVELFGLMI---DEGLMPDEVTFST 451
R L N++++ G +DVV ++I +G + + + F
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 452 TLKALSVS---------ASATFTSSQL-----LHCFALKSGVEGDAAVACSLMDAYSRCG 497
+ + +A S QL H L +G + ++CS++DAY++CG
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 498 HVELSLQIFETLS-------------------------------SPNAICFTSMINGYAR 526
+E + + F+ ++ N + +T++I GY R
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 527 NGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQR 586
G G + L + M+ G+KP++ TF L ++ G+ + M + V+P+
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN-VRPNAI 347
Query: 587 HFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVEL 646
S ++D+ ++G DK DC W++++ + H +G +A ++L ++
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDM 404
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 249/524 (47%), Gaps = 19/524 (3%)
Query: 175 NVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC 234
NV + G YLN L +LFDE+PER++ WN ++ G G E + + M
Sbjct: 74 NVCLKGLFKNGYLNNAL-----DLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQ 128
Query: 235 FDGVEPNGVTFCYL--LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACG 292
+ P TF L L C H G+++ + G N+ V N+++D Y G
Sbjct: 129 RWEIRPTEFTFSILASLVTCVRH-----GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLG 183
Query: 293 CLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLN 352
A F + +V+SWN L+ +D+ AL+ F +M+ P ++ +++
Sbjct: 184 VFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVS 243
Query: 353 SCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE 412
CS E+ GKQ +K+GF S+ A IDM+ KC+ ++ SV +F L K
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSI-VLGAGIDMFSKCNRLDDSVKLFRELEKWDSV 302
Query: 413 CCNSLMTSLS-HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLH 471
CNS++ S S HC +D + LF L + + + PD+ TFS+ L +++ + +H
Sbjct: 303 LCNSMIGSYSWHC-CGEDALRLFILAMTQSVRPDKFTFSSVLSSMN---AVMLDHGADVH 358
Query: 472 CFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGK 531
+K G + D AVA SLM+ Y + G V+L++ +F + I + ++I G ARN
Sbjct: 359 SLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAV 418
Query: 532 QGLAVLHAMV-EKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSC 590
+ LA+ + ++ + LKPD +T + L C + G V EG +F SM+ HGV P H++C
Sbjct: 419 ESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYAC 478
Query: 591 MVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDD 650
+++LLCR G + P + +W +L + + + A+ ++E +P
Sbjct: 479 IIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKS 538
Query: 651 PAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
+L Y ++ S ++R K+ G S I I
Sbjct: 539 SFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIE 582
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 188/388 (48%), Gaps = 12/388 (3%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYG 130
P T N + K+ LN+AL +F MP RD V++N +IS C E + ++
Sbjct: 66 PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125
Query: 131 EMGLLGIRETSTTFS--SVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+M IR T TFS + L C R G G + V ++ N+ V +++ Y
Sbjct: 126 DMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRY----NLVVWNSVMDMYRR 181
Query: 189 VGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
+G+ + A +F + +R++ WN L+ + G E +L+ + M ++P+ T +
Sbjct: 182 LGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMV 241
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVEN 308
+ +CS+ R L++GK+ + +KMGF+ SN V A +D +S C L + K F + +
Sbjct: 242 VSICSDLRELSKGKQALALCIKMGFL-SNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWD 300
Query: 309 VISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHC 368
+ NS++ + + DAL LF + P + +L+S + A + G +H
Sbjct: 301 SVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMN-AVMLDHGADVHS 359
Query: 369 HALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQ 428
+KLGFD + A S L++MY K ++ ++ VF + L N+++ L+
Sbjct: 360 LVIKLGFDLDTAVATS-LMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAV 418
Query: 429 DVVELFG-LMIDEGLMPDEVTFSTTLKA 455
+ + +F L++++ L PD VT L A
Sbjct: 419 ESLAIFNQLLMNQSLKPDRVTLMGILVA 446
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 145/307 (47%), Gaps = 10/307 (3%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP---PEQALHLYGEMGLLGI 137
N +D + + + AL+VF TM RD V++N LI + C E AL + M + I
Sbjct: 173 NSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILS-CSDSGNKEVALDQFWLMREMEI 231
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
+ T S V+++C+ +G Q +K GFLSN V G + + + + +
Sbjct: 232 QPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVK 291
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
LF EL + + + N ++ + C E++L + V P+ TF +L N
Sbjct: 292 LFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLS-SMNAVM 350
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
L+ G + S ++K+GF + + VA +L++ Y G + A F +++I WN+++
Sbjct: 351 LDHGADVHSLVIKLGF-DLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIM 409
Query: 318 VNADNDLLCDALELFTVMQLWGQS--PSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL-G 374
A N ++L +F + L QS P +L+G+L +C A + G QI K G
Sbjct: 410 GLARNSRAVESLAIFNQL-LMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHG 468
Query: 375 FDEGSVH 381
+ G+ H
Sbjct: 469 VNPGNEH 475
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 272/560 (48%), Gaps = 34/560 (6%)
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVK--FGFLSNVFVGGTLVGFYLNVGLREVAR 196
++ ++++ CA +G+ +H ++ + + NV + L+ Y G AR
Sbjct: 57 QSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYAR 116
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM---CFDGVEPNGVTFCYLLKVCS 253
++FD +PERN+ W L+ G+ + G +E +S M CF PN T +L C
Sbjct: 117 QVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF----PNEFTLSSVLTSC- 171
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKS---FEAIPVENVI 310
R GK++ LK+G + +I+VANA++ Y C A ++ FEAI +N++
Sbjct: 172 ---RYEPGKQVHGLALKLG-LHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLV 227
Query: 311 SWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGK------ 364
+WNS+++ +L A+ +F M G +L+ + +S ++ ++ +
Sbjct: 228 TWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCL 287
Query: 365 QIHCHALKLGFDEGSVHAQSALIDMYGK-CSDIESSVAVFESLTK-RTLECCNSLMTSLS 422
Q+H +K G +ALI +Y + D +F ++ R + N ++T+ +
Sbjct: 288 QLHSLTVKSGL-VTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA 346
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGD 482
+ + LFG + E L PD TFS+ LKA + +A S +H +K G D
Sbjct: 347 -VYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALS--IHAQVIKGGFLAD 403
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVE 542
+ SL+ AY++CG ++L +++F+ + S + + + SM+ Y+ +G L V M
Sbjct: 404 TVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM-- 461
Query: 543 KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXX 602
+ PD TF+ L+ C+H G V+EG +F SM P H++C++D+L RA
Sbjct: 462 -DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFA 520
Query: 603 XXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVEL-DPDDPAVWLQASNFY 661
Q P D +W +LL SCR H N +G AA L EL +P + ++Q SN Y
Sbjct: 521 EAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIY 580
Query: 662 AEIGNF-DASREIREVALAR 680
G+F +A+ I+E+ R
Sbjct: 581 NAEGSFNEANLSIKEMETWR 600
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 110/213 (51%), Gaps = 5/213 (2%)
Query: 106 RDTVTYNLLISAWC-FPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVH 164
RD V +N +I+A+ + PE+A+HL+G++ + TFSSVL CA R + +H
Sbjct: 333 RDIVAWNGIITAFAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIH 392
Query: 165 CRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVE 224
+V+K GFL++ + +L+ Y G ++ +FD++ R++ WN +L+ + G V+
Sbjct: 393 AQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVD 452
Query: 225 ESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANAL 284
L + +M + P+ TF LL CS+ R+ EG ++ + + + +
Sbjct: 453 SILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACV 509
Query: 285 VDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
+D S A++ + +P++ + + W +L+
Sbjct: 510 IDMLSRAERFAEAEEVIKQMPMDPDAVVWIALL 542
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 233/459 (50%), Gaps = 9/459 (1%)
Query: 237 GVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVG 296
G+ + T+ L+K C ++R ++EG + + G +F+ N L++ Y L
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGH-RPMMFLVNVLINMYVKFNLLND 114
Query: 297 AKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSR 356
A + F+ +P NVISW +++S + + ALEL +M P+V + +L SC+
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 357 AEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNS 416
++ + +HC +K G E V +SALID++ K + E +++VF+ + NS
Sbjct: 175 MSDV---RMLHCGIIKEGL-ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
++ + + +ELF M G + ++ T ++ L+A + A +H
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY- 289
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAV 536
+ D + +L+D Y +CG +E +L++F + + I +++MI+G A+NG ++ L +
Sbjct: 290 ---DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 537 LHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLC 596
M G KP+ IT + L C+H G++++G F SMK ++G+ P + H+ CM+DLL
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 597 RAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQ 656
+AG + + D W +LL +CR +N + AA+ ++ LDP+D +
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 657 ASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIRQ 695
SN YA +D+ EIR R + +E G S IE+ +
Sbjct: 467 LSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNK 505
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 166/323 (51%), Gaps = 9/323 (2%)
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKF-GFLSNVFVGGTLVGFYLNVGLREV 194
G+ S T+S ++ C + EG + CR + F G +F+ L+ Y+ L
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLI-CRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A +LFD++P+RN+ W ++ + + +++L M D V PN T+ +L+ C+
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
+++ + L I+K G +ES++FV +AL+D ++ G A F+ + + I WNS
Sbjct: 175 ---MSDVRMLHCGIIKEG-LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
++ A N ALELF M+ G +L +L +C+ + LG Q H H +K
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-- 288
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF 434
+D+ + +AL+DMY KC +E ++ VF + +R + +++++ L+ G +Q+ ++LF
Sbjct: 289 YDQDLI-LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLF 347
Query: 435 GLMIDEGLMPDEVTFSTTLKALS 457
M G P+ +T L A S
Sbjct: 348 ERMKSSGTKPNYITIVGVLFACS 370
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 169/345 (48%), Gaps = 17/345 (4%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGL 134
++ N I+ ++K LN A +F MP R+ +++ +ISA+ C ++AL L M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
+R T+SSVL C R +HC ++K G S+VFV L+ + +G E
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A +FDE+ + VWN ++ GF + + +L + RM G T +L+ C+
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
L G + I+K + ++ + NALVD Y CG L A + F + +VI+W++
Sbjct: 273 LALLELGMQAHVHIVK---YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWST 329
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL- 373
++S A N +AL+LF M+ G P+ ++VG+L +CS A + G KL
Sbjct: 330 MISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESSVAVF-------ESLTKRTL 411
G D H +ID+ GK ++ +V + +++T RTL
Sbjct: 390 GIDPVREH-YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTL 433
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 5/243 (2%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGL 134
V+ ++ ID F K + AL+VF M D + +N +I + + AL L+ M
Sbjct: 194 VFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR 253
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
G T +SVL C G+Q H +VK+ ++ + LV Y G E
Sbjct: 254 AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLED 311
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A +F+++ ER++ W+ ++ G + G +E+L + RM G +PN +T +L CS+
Sbjct: 312 ALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSH 371
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWN 313
L +G + K+ ++ ++D G L A K + E + ++W
Sbjct: 372 AGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWR 431
Query: 314 SLV 316
+L+
Sbjct: 432 TLL 434
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/667 (24%), Positives = 292/667 (43%), Gaps = 122/667 (18%)
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQ----VHCRVVKFGFLSNVFVGGTLVGFYLNVGLR 192
+R + +++ L +C R +Q VH ++ FGF + L+ Y
Sbjct: 8 VRAIANRYAANLRLCLP--LRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSEL 65
Query: 193 EVARELFDELPE---------------------------------RNLAVWNVLLRGFCE 219
AR+LFDE+ E R+ ++N ++ GF
Sbjct: 66 NYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSH 125
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLK----VCSNHRRLNEGKKLQSCILK--MGF 273
++N + +M +G +P+ TF +L V + ++ + + LK G+
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQC---VQFHAAALKSGAGY 182
Query: 274 VESNIFVANALVDFYSACGC----LVGAKKSFEAIPVENVISW----------------- 312
+ S V+NALV YS C L A+K F+ I ++ SW
Sbjct: 183 ITS---VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGE 239
Query: 313 ---------------NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRA 357
N+++S + +ALE+ M G + ++ +C+ A
Sbjct: 240 ELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATA 299
Query: 358 EEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSL 417
+ LGKQ+H + L+ ++ S H ++L+ +Y KC + + A+FE + + L N+L
Sbjct: 300 GLLQLGKQVHAYVLRR--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNAL 357
Query: 418 MTS-------------------------------LSHCGATQDVVELFGLMIDEGLMPDE 446
++ L+ G ++ ++LF M EG P +
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD 417
Query: 447 VTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIF 506
FS +K+ +V + + + Q H LK G + + +L+ Y++CG VE + Q+F
Sbjct: 418 YAFSGAIKSCAVLGA--YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVF 475
Query: 507 ETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVK 566
T+ +++ + ++I ++G G + + V M++KG++PD IT L LT C+H G+V
Sbjct: 476 RTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVD 535
Query: 567 EGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRS 626
+GR FDSM++V+ + P H++ ++DLLCR+G P K +W +LL
Sbjct: 536 QGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Query: 627 CRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREI 686
CR H N E+G AA L L P+ ++ SN +A G ++ +R++ R + +E+
Sbjct: 596 CRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEV 655
Query: 687 GHSSIEI 693
S IE+
Sbjct: 656 ACSWIEM 662
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 135/543 (24%), Positives = 230/543 (42%), Gaps = 89/543 (16%)
Query: 84 IDAFIKSRDLNSALAVFHTMP--LRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRE 139
+ + S D+ A VF P +RDTV YN +I+ + + A++L+ +M G +
Sbjct: 87 VSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146
Query: 140 TSTTFSSVLAVCAR-SGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG----LREV 194
+ TF+SVLA A + ++ VQ H +K G V LV Y L
Sbjct: 147 DNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHS 206
Query: 195 ARELFDELPERN--------------------------------LAVWNVLLRGFCELGC 222
AR++FDE+ E++ L +N ++ G+ G
Sbjct: 207 ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 223 VEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVAN 282
+E+L RM G+E + T+ +++ C+ L GK++ + +L+ + + N
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE--DFSFHFDN 324
Query: 283 ALVDFYSACGCLVGAKKSFEAIPVENVISWNSL--------------------------- 315
+LV Y CG A+ FE +P ++++SWN+L
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 316 ----VSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
+S A+N + L+LF+ M+ G P + G + SC+ G+Q H L
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC-----NSLMTSLSHCGA 426
K+GFD S+ A +ALI MY KC +E + VF RT+ C N+L+ +L G
Sbjct: 445 KIGFDS-SLSAGNALITMYAKCGVVEEARQVF-----RTMPCLDSVSWNALIAALGQHGH 498
Query: 427 TQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVA 486
+ V+++ M+ +G+ PD +T T L A S A + + A
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACS-HAGLVDQGRKYFDSMETVYRIPPGADHY 557
Query: 487 CSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGL 545
L+D R G + + E+L P A + ++++G +G + G+ + GL
Sbjct: 558 ARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GL 615
Query: 546 KPD 548
P+
Sbjct: 616 IPE 618
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 209/489 (42%), Gaps = 66/489 (13%)
Query: 109 VTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCR 166
V YN +IS + ++AL + M GI T+ SV+ CA +G + G QVH
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 167 VVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGF--------- 217
V++ S F +LV Y G + AR +F+++P ++L WN LL G+
Sbjct: 312 VLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 218 ----------------------CELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
E G EE L +S M +G EP F +K C+
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSL 315
G++ + +LK+GF +S++ NAL+ Y+ CG + A++ F +P + +SWN+L
Sbjct: 431 GAYCNGQQYHAQLLKIGF-DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNAL 489
Query: 316 VSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ-IHCHALKLG 374
++ + +A++++ M G P +L+ +L +CS A + G++
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR 549
Query: 375 FDEGSVHAQSALIDMY---GKCSDIESSVAVFESLT-KRTLECCNSLMTSLSHCGATQDV 430
G+ H + LID+ GK SD ES V ESL K T E +L LS C +
Sbjct: 550 IPPGADH-YARLIDLLCRSGKFSDAES---VIESLPFKPTAEIWEAL---LSGCRVHGN- 601
Query: 431 VELFGLMIDE--GLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACS 488
+EL + D+ GL+P+ T LS +AT ++ L VACS
Sbjct: 602 MELGIIAADKLFGLIPEH---DGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACS 658
Query: 489 LMDAYSRCGHVELSLQIF--ETLSSPNA----ICFTSMINGYARNGMGKQGLAVLHAMVE 542
++ +E + F + S P A I + R G VLH +
Sbjct: 659 WIE-------METQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVES 711
Query: 543 KGLKPDEIT 551
G K D +T
Sbjct: 712 DGHKEDMLT 720
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 113/250 (45%), Gaps = 3/250 (1%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHL 128
+ P+ + + N + ++ S + A +F M ++ +++ ++IS E+ L L
Sbjct: 345 KMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+ M G FS + CA G + G Q H +++K GF S++ G L+ Y
Sbjct: 405 FSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAK 464
Query: 189 VGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
G+ E AR++F +P + WN L+ + G E+++ Y M G+ P+ +T +
Sbjct: 465 CGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVEN 308
L CS+ +++G+K + + + L+D G A+ E++P +
Sbjct: 525 LTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKP 584
Query: 309 VIS-WNSLVS 317
W +L+S
Sbjct: 585 TAEIWEALLS 594
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 229/481 (47%), Gaps = 40/481 (8%)
Query: 247 YLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV 306
Y + + NE KK+ + I+ G +S+ F+ +VDF + A + F +
Sbjct: 12 YFIPFLQRVKSRNEWKKINASIIIHGLSQSS-FMVTKMVDFCDKIEDMDYATRLFNQVSN 70
Query: 307 ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQS---PSVRSLVGLLNSCSRAEEIGLG 363
NV +NS++ N L CD + ++ QL +S P + + SC+ LG
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYK--QLLRKSFELPDRFTFPFMFKSCASLGSCYLG 128
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH 423
KQ+H H K G V ++ALIDMY K D+ + VF+ + +R + NSL++ +
Sbjct: 129 KQVHGHLCKFG-PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 187
Query: 424 CGATQDVVELFGLMIDE-------------------------------GLMPDEVTFSTT 452
G + LF LM+D+ G+ PDE++ +
Sbjct: 188 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISV 247
Query: 453 LKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP 512
L S + + + +H +A + G V +L++ YS+CG + ++Q+F +
Sbjct: 248 LP--SCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK 305
Query: 513 NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILF 572
+ I +++MI+GYA +G + + M +KP+ ITFL L+ C+H GM +EG F
Sbjct: 306 DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYF 365
Query: 573 DSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKN 632
D M+ + ++P H+ C++D+L RAG P K D +W SLL SCR+ N
Sbjct: 366 DMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGN 425
Query: 633 EEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
+V A LVEL+P+D ++ +N YA++G ++ +R++ M + G S IE
Sbjct: 426 LDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIE 485
Query: 693 I 693
+
Sbjct: 486 V 486
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 198/455 (43%), Gaps = 47/455 (10%)
Query: 132 MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
M GIRE F L R E +++ ++ G + F+ +V F +
Sbjct: 1 MAFHGIREVENYFIPFLQ---RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIED 57
Query: 192 REVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE-PNGVTFCYLLK 250
+ A LF+++ N+ ++N ++R + + + Y ++ E P+ TF ++ K
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVI 310
C++ GK++ + K G ++ NAL+D Y LV A K F+ + +VI
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFG-PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI 176
Query: 311 SW-------------------------------NSLVSVNADNDLLCDALELFTVMQLWG 339
SW +++S +A++ F MQL G
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
P SL+ +L SC++ + LGK IH +A + GF + +ALI+MY KC I +
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLK-QTGVCNALIEMYSKCGVISQA 295
Query: 400 VAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
+ +F + + + +++++ ++ G +E F M + P+ +TF L LS
Sbjct: 296 IQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITF---LGLLSAC 352
Query: 460 ASATFTSSQLLHCFALKSGVEGDAAV---ACSLMDAYSRCGHVELSLQIFETLS-SPNAI 515
+ L + ++ + + + C L+D +R G +E +++I +T+ P++
Sbjct: 353 SHVGMWQEGLRYFDMMRQDYQIEPKIEHYGC-LIDVLARAGKLERAVEITKTMPMKPDSK 411
Query: 516 CFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEI 550
+ S+++ G L + +VE L+P+++
Sbjct: 412 IWGSLLSSCRTPGNLDVALVAMDHLVE--LEPEDM 444
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 182/415 (43%), Gaps = 52/415 (12%)
Query: 48 PLMQQRHQSLSFSFIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRD 107
P +Q+ + I A + S + TK +D K D++ A +F+ + +
Sbjct: 15 PFLQRVKSRNEWKKINASIIIHGLSQSSFMVTK--MVDFCDKIEDMDYATRLFNQVSNPN 72
Query: 108 TVTYNLLISAWCFPPE--QALHLYGEMGLLGIRET-----STTFSSVLAVCARSGFHREG 160
YN +I A+ + +Y ++ +R++ TF + CA G G
Sbjct: 73 VFLYNSIIRAYTHNSLYCDVIRIYKQL----LRKSFELPDRFTFPFMFKSCASLGSCYLG 128
Query: 161 VQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCEL 220
QVH + KFG +V L+ Y+ A ++FDE+ ER++ WN LL G+ L
Sbjct: 129 KQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARL 188
Query: 221 -------------------------------GCVEESLNYYSRMCFDGVEPNGVTFCYLL 249
GC E+++++ M G+EP+ ++ +L
Sbjct: 189 GQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248
Query: 250 KVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV 309
C+ L GK + + GF++ V NAL++ YS CG + A + F + ++V
Sbjct: 249 PSCAQLGSLELGKWIHLYAERRGFLKQT-GVCNALIEMYSKCGVISQAIQLFGQMEGKDV 307
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ--IH 367
ISW++++S A + A+E F MQ P+ + +GLL++CS +G+ ++ +
Sbjct: 308 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSH---VGMWQEGLRY 364
Query: 368 CHALKLGFD-EGSVHAQSALIDMYGKCSDIESSVAVFESL-TKRTLECCNSLMTS 420
++ + E + LID+ + +E +V + +++ K + SL++S
Sbjct: 365 FDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 419
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 173/669 (25%), Positives = 290/669 (43%), Gaps = 114/669 (17%)
Query: 115 ISAWCF--PPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGF 172
+ A CF P GE +T S L CA S G Q+HCRV+K G
Sbjct: 18 LQARCFSAPSRTHFDFSGESS-----DTERALVSALGSCASSNDVTCGRQIHCRVLKSGL 72
Query: 173 LSNVFVGGTLVGFYLNVGL--------REVAR-----------------------ELFDE 201
SN ++ +++ Y L R+ A+ +LFD
Sbjct: 73 DSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDV 132
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+PER+ + L++G+ + E++ + M G+ N VT ++ CS+ + +
Sbjct: 133 MPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC 192
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
+ LQS +K+ +E +FV+ L+ Y C CL A+K F+ +P N+++WN +++ +
Sbjct: 193 RMLQSLAIKLK-LEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSK 251
Query: 322 NDLLCDALELF-------------------------------TVMQLWGQSPSVRSLVGL 350
L+ A ELF T M G PS +V L
Sbjct: 252 AGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDL 311
Query: 351 LNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRT 410
L++ +R+ G Q+H +K GFD Q+ +I Y +DI+ ++ FE+ K
Sbjct: 312 LSASARSVGSSKGLQLHGTIVKRGFDCYDF-LQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 411 LECCNSLMTSLSHCGATQDVVELFGLMIDEGLM--------------------------- 443
+ N+L+ G + E+F D+ +
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMIS 430
Query: 444 -----PDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGH 498
PD +T + A +S+ + + H + S + + + +++D Y++CG
Sbjct: 431 SSQVKPDAITMVSVFSA--ISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 488
Query: 499 VELSLQIF---ETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCA 555
+E +L IF + +SS + ++I G A +G K L + + +KP+ ITF+
Sbjct: 489 IETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 556 LTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKR 615
L+ C H G+V+ G+ F+SMKS HG++PD +H+ CMVDLL +AG + P K
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 616 DCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIRE 675
D +W LL + R+H N E+ AA L +DP + SN YA+ G ++ +
Sbjct: 609 DVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWE------D 662
Query: 676 VALARKMTR 684
VAL R+ R
Sbjct: 663 VALVREEMR 671
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 228/516 (44%), Gaps = 75/516 (14%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIR 138
N +D +++SR L AL +F MP R V+Y LI + + +A+ L+ EM LGI
Sbjct: 111 NIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIM 170
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFY-LNVGLREVARE 197
T ++V++ C+ G + + +K VFV L+ Y L + L++ AR+
Sbjct: 171 LNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKD-ARK 229
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVE-------------------------------ES 226
LFDE+PERNL WNV+L G+ + G +E E+
Sbjct: 230 LFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEA 289
Query: 227 LNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGF------------- 273
L YY+ M G++P+ V LL + ++G +L I+K GF
Sbjct: 290 LVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHF 349
Query: 274 -----------------VESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV 316
V+ +I NAL+ + G + A++ F+ +++ SWN+++
Sbjct: 350 YAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMI 409
Query: 317 SVNADNDLLCDALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGF 375
S A + AL LF M Q P ++V + ++ S + GK+ H + L
Sbjct: 410 SGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY-LNFST 468
Query: 376 DEGSVHAQSALIDMYGKCSDIESSVAVF---ESLTKRTLECCNSLMTSLSHCGATQDVVE 432
+ + +A+IDMY KC IE+++ +F ++++ T+ N+++ + G + ++
Sbjct: 469 IPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALD 528
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS--GVEGDAAVACSLM 490
L+ + + P+ +TF + LS A + ++KS G+E D ++
Sbjct: 529 LYSDLQSLPIKPNSITF---VGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMV 585
Query: 491 DAYSRCGHVELSLQIFETLSSPNAICFTSMINGYAR 526
D + G +E + ++ + + + M+ +R
Sbjct: 586 DLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASR 621
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 165/373 (44%), Gaps = 42/373 (11%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQ---ALHLY 129
P + T N ++ + K+ + A +F + +D V++ +I C Q AL Y
Sbjct: 235 PERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDG-CLRKNQLDEALVYY 293
Query: 130 GEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFY--- 186
EM G++ + +L+ ARS +G+Q+H +VK GF F+ T++ FY
Sbjct: 294 TEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVS 353
Query: 187 ----------------------------LNVGLREVARELFDELPERNLAVWNVLLRGFC 218
+ G+ E ARE+FD+ ++++ WN ++ G+
Sbjct: 354 NDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYA 413
Query: 219 ELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESN 277
+ + +L+ + M V+P+ +T + S+ L EGK+ L + N
Sbjct: 414 QSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHD-YLNFSTIPPN 472
Query: 278 IFVANALVDFYSACGCLVGAKKSF---EAIPVENVISWNSLVSVNADNDLLCDALELFTV 334
+ A++D Y+ CG + A F + I + WN+++ +A + AL+L++
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSD 532
Query: 335 MQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD-EGSVHAQSALIDMYGKC 393
+Q P+ + VG+L++C A + LGK + ++K E + ++D+ GK
Sbjct: 533 LQSLPIKPNSITFVGVLSACCHAGLVELGKT-YFESMKSDHGIEPDIKHYGCMVDLLGKA 591
Query: 394 SDIESSVAVFESL 406
+E + + + +
Sbjct: 592 GRLEEAKEMIKKM 604
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 113/252 (44%), Gaps = 7/252 (2%)
Query: 75 DCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEM 132
D + ++N I F+K+ + A VF +D ++N +IS + P+ ALHL+ EM
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 133 -GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
++ + T SV + + G EG + H + N + ++ Y G
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 488
Query: 192 REVARELFDE---LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
E A +F + + ++ WN ++ G G + +L+ YS + ++PN +TF +
Sbjct: 489 IETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE- 307
L C + + GK + +E +I +VD G L AK+ + +PV+
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 308 NVISWNSLVSVN 319
+V+ W L+S +
Sbjct: 609 DVMIWGMLLSAS 620
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 146/604 (24%), Positives = 267/604 (44%), Gaps = 74/604 (12%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
Q H R++K G ++ ++ L+ Y N A + +P+ + ++ L+ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 222 CVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVA 281
+S+ +SRM G+ P+ L KVC+ GK++ C+ + ++ + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIH-CVSCVSGLDMDAFVQ 154
Query: 282 NALVDFYSACGCLVGAKKSF----------------------------------EAIPVE 307
++ Y CG + A+K F E+ +E
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 308 -NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQI 366
N++SWN ++S + +A+ +F + G P ++ +L S +E + +G+ I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 367 HCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGA 426
H + +K G + SA+IDMYGK + +++F CN+ +T LS G
Sbjct: 275 HGYVIKQGLLKDKC-VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 427 TQDVVELFGLMIDE-----------------------------------GLMPDEVTFST 451
+E+F L ++ G+ P+ VT +
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 452 TLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS 511
L A A+ S H FA++ + + V +L+D Y++CG + LS +F + +
Sbjct: 394 MLPACGNIAALGHGRST--HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 512 PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRIL 571
N +C+ S++NG++ +G K+ +++ +++ LKPD I+F L+ C G+ EG
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 572 FDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHK 631
F M +G++P H+SCMV+LL RAG + P + D +W +LL SCR
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 632 NEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSI 691
N ++ AA+ L L+P++P ++ SN YA G + IR + + + G S I
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Query: 692 EIRQ 695
+++
Sbjct: 632 QVKN 635
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 189/450 (42%), Gaps = 74/450 (16%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLL 135
Y + I ++ N A V ++P +++ LI A Q++ ++ M
Sbjct: 51 YISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSH 110
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
G+ S ++ VCA + G Q+HC G + FV G++ Y+ G A
Sbjct: 111 GLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDA 170
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE---------------- 239
R++FD + ++++ + LL + GC+EE + S M G+E
Sbjct: 171 RKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRS 230
Query: 240 -------------------PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
P+ VT +L + LN G+ + ++K G ++ V
Sbjct: 231 GYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKC-V 289
Query: 281 ANALVDFYSACGCLVG-------------------------------AKKSFEAIPVE-- 307
+A++D Y G + G A + FE +
Sbjct: 290 ISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTM 349
Query: 308 --NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ 365
NV+SW S+++ A N +ALELF MQ+ G P+ ++ +L +C +G G+
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRS 409
Query: 366 IHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG 425
H A+++ + +VH SALIDMY KC I S VF + + L C NSLM S G
Sbjct: 410 THGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHG 468
Query: 426 ATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
++V+ +F ++ L PD ++F++ L A
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSA 498
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 1/195 (0%)
Query: 124 QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV 183
+AL L+ EM + G++ T S+L C G H V+ L NV VG L+
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430
Query: 184 GFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGV 243
Y G +++ +F+ +P +NL WN L+ GF G +E ++ + + ++P+ +
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 244 TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
+F LL C +EG K + + ++ + + +V+ G L A +
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 304 IPVE-NVISWNSLVS 317
+P E + W +L++
Sbjct: 551 MPFEPDSCVWGALLN 565
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 215/416 (51%), Gaps = 5/416 (1%)
Query: 279 FVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQL- 337
F+ + LV Y G V A+K F+ +P +++SWNSL+S + L E+ + M +
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 338 -WGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
G P+ + + ++++C G+ IH +K G E V +A I+ YGK D+
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLE-EVKVVNAFINWYGKTGDL 185
Query: 397 ESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKAL 456
SS +FE L+ + L N+++ G + + F + G PD+ TF L+
Sbjct: 186 TSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLR-- 243
Query: 457 SVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAIC 516
S +Q +H + G G+ + +L+D YS+ G +E S +F ++SP+++
Sbjct: 244 SCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMA 303
Query: 517 FTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMK 576
+T+M+ YA +G G+ + MV G+ PD +TF L C+H+G+V+EG+ F++M
Sbjct: 304 WTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMS 363
Query: 577 SVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVG 636
+ + P H+SCMVDLL R+G + P + +W +LL +CR +K+ ++G
Sbjct: 364 KRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLG 423
Query: 637 TRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
T+AA+ L EL+P D ++ SN Y+ G + + IR + + + R G S IE
Sbjct: 424 TKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 4/300 (1%)
Query: 163 VHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGC 222
+HC+VVK + F+G LVG YL +G A +LFDE+PER+L WN L+ G+ G
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 223 VEESLNYYSRMCFD--GVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
+ + SRM G PN VTF ++ C EG+ + ++K G +E + V
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLE-EVKV 171
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
NA +++Y G L + K FE + ++N++SWN+++ ++ N L L F + + G
Sbjct: 172 VNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGH 231
Query: 341 SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSV 400
P + + +L SC + L + IH + GF G+ +AL+D+Y K +E S
Sbjct: 232 EPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS-GNKCITTALLDLYSKLGRLEDSS 290
Query: 401 AVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSA 460
VF +T +++ + + G +D ++ F LM+ G+ PD VTF+ L A S S
Sbjct: 291 TVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSG 350
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 147/319 (46%), Gaps = 13/319 (4%)
Query: 96 ALAVFHTMPLRDTVTYNLLISAW--------CFPPEQALHLYGEMGLLGIRETSTTFSSV 147
A +F MP RD V++N LIS + CF + + +G R TF S+
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMI----SEVGFRPNEVTFLSM 140
Query: 148 LAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNL 207
++ C G EG +H V+KFG L V V + +Y G + +LF++L +NL
Sbjct: 141 ISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNL 200
Query: 208 AVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSC 267
WN ++ + G E+ L Y++ G EP+ TF +L+ C + + + +
Sbjct: 201 VSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGL 260
Query: 268 ILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCD 327
I+ GF N + AL+D YS G L + F I + ++W ++++ A + D
Sbjct: 261 IMFGGF-SGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRD 319
Query: 328 ALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALI 387
A++ F +M +G SP + LLN+CS + + GK K + + S ++
Sbjct: 320 AIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMV 379
Query: 388 DMYGKCSDIESSVAVFESL 406
D+ G+ ++ + + + +
Sbjct: 380 DLLGRSGLLQDAYGLIKEM 398
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 32/316 (10%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYN--LLISAWCFPPEQALHLYGEMGLLGIR 138
N I+ + K+ DL S+ +F + +++ V++N ++I E+ L + +G
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
TF +VL C G R +H ++ GF N + L+ Y +G E + +
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
F E+ + W +L + G +++ ++ M G+ P+ VTF +LL CS+ +
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS-WNSLVS 317
EGK + K ++ + + +VD G L A + +P+E W +L+
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 412
Query: 318 ---VNADNDLLCDALE------------------LFTVMQLWGQSPSVRSLV---GLLNS 353
V D L A E +++ LW + +R+L+ GL+ +
Sbjct: 413 ACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRA 472
Query: 354 --CSRAEEIGLGKQIH 367
CS E G +IH
Sbjct: 473 SGCSYIEH---GNKIH 485
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 468 QLLHCFALKS-----GVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMIN 522
+LLHC +KS G GD V C Y R GH + ++F+ + + + + S+I+
Sbjct: 51 RLLHCKVVKSVSYRHGFIGDQLVGC-----YLRLGHDVCAEKLFDEMPERDLVSWNSLIS 105
Query: 523 GYARNGMGKQGLAVLHAMV--EKGLKPDEITFLCALTGCNHTGMVKEGR 569
GY+ G + VL M+ E G +P+E+TFL ++ C + G +EGR
Sbjct: 106 GYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 158/633 (24%), Positives = 296/633 (46%), Gaps = 37/633 (5%)
Query: 72 NPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLY 129
+P V N I + K D +A VF + RD ++ N +++ + E+A +
Sbjct: 321 SPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGIL 380
Query: 130 GEM-GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVF-VGGTLVGFYL 187
+M + I+ T S+ ++C F REG VH V+ S V +++ Y
Sbjct: 381 NQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYG 440
Query: 188 NVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC--FDGVEPNGVTF 245
GL A LF R+L WN ++ F + G ++ N + + + + + T
Sbjct: 441 KCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTV 500
Query: 246 CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
+L C + L GK + + K+G + S + +
Sbjct: 501 LAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSE------------------- 541
Query: 306 VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVR-SLVGLLNSCSRAEEIGLGK 364
++ SWNS++S A + ++L F M G+ +R L+ LL + S + +GL
Sbjct: 542 TRDLTSWNSVISGCASSGHHLESLRAFQAMSREGK---IRHDLITLLGTISASGNLGLVL 598
Query: 365 QIHC-HALKL-GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLS 422
Q C H L + E Q+ LI MYG+C DIES+V VF ++ L N ++++LS
Sbjct: 599 QGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALS 658
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGD 482
A ++V +LF + L P+E+TF L A + S ++ HC ++ G + +
Sbjct: 659 QNKAGREVFQLFR---NLKLEPNEITFVGLLSASTQLGSTSY--GMQAHCHLIRRGFQAN 713
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVE 542
V+ +L+D YS CG +E +++F + + S+I+ + +GMG++ + + +
Sbjct: 714 PFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSS 773
Query: 543 KG-LKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXX 601
++P++ +F+ L+ C+H+G + EG + M+ GV+P H +VD+L RAG
Sbjct: 774 NSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKL 833
Query: 602 XXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFY 661
+ + +W +LL +C H + ++G A+VL E++PD+ + ++ +N Y
Sbjct: 834 REAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTY 893
Query: 662 AEIGNFDASREIREVALARKMTREIGHSSIEIR 694
+G ++ + +R++ + + G+S I++R
Sbjct: 894 VGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 127/526 (24%), Positives = 240/526 (45%), Gaps = 36/526 (6%)
Query: 60 SFIRAQTTTTPRNPS----DC-----VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVT 110
SF+ T TPR+ C + T ++ + + ++ +L S+ +F + +D +
Sbjct: 96 SFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIV 155
Query: 111 YNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVV 168
+N +I+A A+ L+ EM G STT + + R+ +HC +
Sbjct: 156 WNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAI 215
Query: 169 KFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLN 228
+ G + + + L+ Y A +F + R++ WN ++ G +SL
Sbjct: 216 ETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQ 275
Query: 229 YYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFV-ESNIFVANALVDF 287
Y+ M G E + VTF ++ CS+ L G+ L ++K G+ E+++ V N+++
Sbjct: 276 YFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISM 335
Query: 288 YSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ-SPSVRS 346
YS CG A+ FE + +VIS N++++ A N + +A + MQ + P + +
Sbjct: 336 YSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIAT 395
Query: 347 LVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESL 406
+V + + C G+ +H + +++ ++ +++IDMYGKC + +F++
Sbjct: 396 VVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTT 455
Query: 407 TKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKAL-SVSASATFT 465
T R L NS++++ S G T LF ++ E + + ST L L S +S +
Sbjct: 456 THRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTVLAILTSCDSSDSLI 514
Query: 466 SSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGY 524
+ +HC+ K G L A+ R ET+S + + + S+I+G
Sbjct: 515 FGKSVHCWLQKLG---------DLTSAFLR----------LETMSETRDLTSWNSVISGC 555
Query: 525 ARNGMGKQGLAVLHAMVEKG-LKPDEITFLCALTGCNHTGMVKEGR 569
A +G + L AM +G ++ D IT L ++ + G+V +GR
Sbjct: 556 ASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR 601
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 235/467 (50%), Gaps = 42/467 (8%)
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNA 320
GKK+ + I+K GF + ++ ++ L+ + CGCL A++ F+ +P + ++N ++S
Sbjct: 53 GKKIHADIIKTGF-QPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 321 DNDLLCDALELFTVMQLWGQSPSVRSLVGLLN-SCSRAEEIGLGKQ----IHCHALKLGF 375
+ L+ + L L M G+ +L +L S SR + L + +H +K
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 376 DEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFG 435
+ V +AL+D Y K +ES+ VFE++ + CC S+++ + G +D E+F
Sbjct: 172 ELDDVLI-TALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 436 L--------------------------------MIDEGLMPDEVTFSTTLKALSVSASAT 463
M G P+ TF++ + A SV S
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 464 FTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMING 523
Q +H +KSGV + SL+D Y++CG + + ++F+ + N +TSMI+G
Sbjct: 291 V--GQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDG 348
Query: 524 YARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQP 583
Y +NG ++ L + M E ++P+ +TFL AL+ C+H+G+V +G +F+SM+ + ++P
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP 408
Query: 584 DQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVL 643
H++C+VDL+ RAG P++ D +W++LL SC H N E+ + AA L
Sbjct: 409 KMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASEL 468
Query: 644 VELDPDD-PAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHS 689
+L+ D P +L SN YA +D +IREV R++++ IG S
Sbjct: 469 FKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 191/461 (41%), Gaps = 96/461 (20%)
Query: 158 REGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGF 217
+ G ++H ++K GF ++ + L+ +L G AR++FDELP+ L+ +N ++ G+
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 218 CELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR-----------RLNEGKKLQS 266
+ G V+E L RM + G + +G T +LK SN R RL + +
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLK-ASNSRGSTMILPRSLCRL-----VHA 164
Query: 267 CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLC 326
I+K VE + + ALVD Y G L A+ FE + ENV+ S++S + +
Sbjct: 165 RIIKCD-VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVE 223
Query: 327 DALELFTV--------------------------------MQLWGQSPSVRSLVGLLNSC 354
DA E+F MQ G P++ + ++ +C
Sbjct: 224 DAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGAC 283
Query: 355 SRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC 414
S +G+Q+H +K G + S+L+DMY KC I + VF+ + ++ +
Sbjct: 284 SVLTSHEVGQQVHAQIMKSGV-YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSW 342
Query: 415 NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFA 474
S++ G ++ +ELF M + + P+ VTF L ALS
Sbjct: 343 TSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTF---LGALS----------------- 382
Query: 475 LKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-----SPNAICFTSMINGYARNGM 529
AC S G V+ +IFE++ P + +++ R G
Sbjct: 383 -----------AC------SHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGD 425
Query: 530 GKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRI 570
+ AM E +PD + L+ CN G V+ I
Sbjct: 426 LNKAFEFARAMPE---RPDSDIWAALLSSCNLHGNVELASI 463
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 3/225 (1%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQA---LHLYGEMGLLGIRET 140
I ++ + A +F+T ++D V YN ++ + E A + +Y M G
Sbjct: 213 ISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPN 272
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD 200
+TF+SV+ C+ H G QVH +++K G +++ +G +L+ Y G AR +FD
Sbjct: 273 ISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFD 332
Query: 201 ELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE 260
++ E+N+ W ++ G+ + G EE+L ++RM +EPN VTF L CS+ +++
Sbjct: 333 QMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDK 392
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
G ++ + + ++ + +VD G L A + A+P
Sbjct: 393 GYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMP 437
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/523 (28%), Positives = 264/523 (50%), Gaps = 27/523 (5%)
Query: 175 NVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC 234
N+ LV Y+ G + AR++FD +PERN+ W L++G+ G V+ + + + +M
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 235 FDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCL 294
E N V++ +L L +G+ +C L + + +++ G +
Sbjct: 138 ----EKNKVSWTVMLIGF-----LQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRV 188
Query: 295 VGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNS- 353
A++ F+ + +VI+W ++V+ N+ + DA ++F VM + L+G + +
Sbjct: 189 DEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNG 248
Query: 354 -CSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE 412
AEE+ +K V A +A+I G+ +I + VF+S+ +R
Sbjct: 249 RIEDAEEL-----FEVMPVK------PVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 413 CCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSAS-ATFTSSQLLH 471
+++ G + ++LF LM +G+ P TF T + LSV AS A+ + +H
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRP---TFPTLISILSVCASLASLHHGKQVH 354
Query: 472 CFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGK 531
++ + D VA LM Y +CG + S IF+ S + I + S+I+GYA +G+G+
Sbjct: 355 AQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGE 414
Query: 532 QGLAVLHAMVEKG-LKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSC 590
+ L V M G KP+E+TF+ L+ C++ GMV+EG +++SM+SV GV+P H++C
Sbjct: 415 EALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYAC 474
Query: 591 MVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDD 650
MVD+L RAG + D +W SLL +CR+H +V A+ L+E++P++
Sbjct: 475 MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPEN 534
Query: 651 PAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
++ SN YA G + E+R++ R + + G S E+
Sbjct: 535 SGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEV 577
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 6/249 (2%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW---CFPPEQALHLY 129
P V N I + ++ A VF +M R+ ++ +I F E AL L+
Sbjct: 261 PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELE-ALDLF 319
Query: 130 GEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNV 189
M G+R T T S+L+VCA G QVH ++V+ F +V+V L+ Y+
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 190 GLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYL 248
G ++ +FD P +++ +WN ++ G+ G EE+L + M G +PN VTF
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE- 307
L CS + EG K+ + + V+ +VD G A + +++ VE
Sbjct: 440 LSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEP 499
Query: 308 NVISWNSLV 316
+ W SL+
Sbjct: 500 DAAVWGSLL 508
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 159/379 (41%), Gaps = 38/379 (10%)
Query: 275 ESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTV 334
+ NI N LV Y G + A+K F+ +P NV+SW +LV N + A LF
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 335 MQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
M + L+G L R ++ C ++ D+ ++ A++++I K
Sbjct: 136 MPEKNKVSWTVMLIGFLQD-GRIDDA-------CKLYEMIPDKDNI-ARTSMIHGLCKEG 186
Query: 395 DIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
++ + +F+ +++R++ +++T D ++F +M ++ EV++++ L
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLM 242
Query: 455 ALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLM-DAYSRCGHVELSLQIFETLSSPN 513
V + +L +K +AC+ M + G + + ++F+++ N
Sbjct: 243 GY-VQNGRIEDAEELFEVMPVK------PVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Query: 514 AICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFD 573
+ ++I + RNG + L + M ++G++P T + L+ C + G
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG----- 350
Query: 574 SMKSVHG------VQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSC 627
K VH D S ++ + + G + P K D MW+S++
Sbjct: 351 --KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGY 407
Query: 628 RSHKNEEVGTRAAQVLVEL 646
SH +G A +V E+
Sbjct: 408 ASHG---LGEEALKVFCEM 423
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 130/299 (43%), Gaps = 29/299 (9%)
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
AN + S G + A+K F++ +++ SWNS+V+ N + DA +LF M
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----P 75
Query: 341 SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD---EGSVHAQSALIDMYGKCSDIE 397
++ S GL++ + EI +++ FD E +V + +AL+ Y ++
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKV--------FDLMPERNVVSWTALVKGYVHNGKVD 127
Query: 398 SSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALS 457
+ ++F + ++ ++ G D +L+ ++ D+ D + ++ + L
Sbjct: 128 VAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLC 183
Query: 458 VSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICF 517
+ ++ + +S + +++ Y + V+ + +IF+ + + +
Sbjct: 184 KEGRVD-EAREIFDEMSERSVI-----TWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSW 237
Query: 518 TSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMK 576
TSM+ GY +NG + + M K + I ++G G + + R +FDSMK
Sbjct: 238 TSMLMGYVQNGRIEDAEELFEVMPVKPV----IACNAMISGLGQKGEIAKARRVFDSMK 292
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/570 (25%), Positives = 275/570 (48%), Gaps = 41/570 (7%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
Q+H + ++ LS+ ++ Y N+ L A LF L + W ++R F +
Sbjct: 26 QLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQS 84
Query: 222 CVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVA 281
++L + M G P+ F +LK C+ L G+ + I+++G ++ +++
Sbjct: 85 LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG-MDCDLYTG 143
Query: 282 NALVDFYS-------------------------------ACGCLV-----GAKKSFEAIP 305
NAL++ Y+ A C++ ++ FE +P
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203
Query: 306 VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ 365
++V+S+N++++ A + + DAL + M P +L +L S ++ GK+
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 366 IHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG 425
IH + ++ G D V+ S+L+DMY K + IE S VF L R NSL+ G
Sbjct: 264 IHGYVIRKGIDS-DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNG 322
Query: 426 ATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAV 485
+ + LF M+ + P V FS+ + A + AT + LH + L+ G + +
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPA--CAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 486 ACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGL 545
A +L+D YS+CG+++ + +IF+ ++ + + +T++I G+A +G G + +++ M +G+
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 546 KPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXX 605
KP+++ F+ LT C+H G+V E F+SM V+G+ + H++ + DLL RAG
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Query: 606 XXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIG 665
+ + +WS+LL SC HKN E+ + A+ + +D ++ ++ N YA G
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNG 560
Query: 666 NFDASREIREVALARKMTREIGHSSIEIRQ 695
+ ++R + + ++ S IE++
Sbjct: 561 RWKEMAKLRLRMRKKGLRKKPACSWIEMKN 590
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 206/459 (44%), Gaps = 77/459 (16%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAV 150
++S VF MP +D V+YN +I+ + E AL + EMG ++ S T SSVL +
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 151 CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVW 210
+ +G ++H V++ G S+V++G +LV Y E + +F L R+ W
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILK 270
N L+ G+ + G E+L + +M V+P V F ++ C++ L+ GK+L +L+
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 271 MGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALE 330
GF SNIF+A+ALVD YS CG + A+K F+ + V + +SW +++ +A + +A+
Sbjct: 372 GGF-GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430
Query: 331 LFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMY 390
LF M+ G P+ + V +L +CS +GL
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACS---HVGL---------------------------- 459
Query: 391 GKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFS 450
++ + F S+TK L L H A D++ G +
Sbjct: 460 -----VDEAWGYFNSMTK-----VYGLNQELEHYAAVADLLGRAGKL------------- 496
Query: 451 TTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFE--- 507
+ + F K VE +V +L+ + S ++EL+ ++ E
Sbjct: 497 -----------------EEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539
Query: 508 TLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLK 546
T+ S N + M N YA NG K+ + M +KGL+
Sbjct: 540 TVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLR 578
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/592 (24%), Positives = 271/592 (45%), Gaps = 46/592 (7%)
Query: 119 CFPPEQALHLYGEMGLLGIRETSTTF-----SSVLAVCARSGFHREGVQVHCRVVKFGFL 173
C Q + LL + S F +S+L+ C G Q+H + G
Sbjct: 56 CISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 174 SNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM 233
+ + LV FY L + A+ + + + WNVL+ + +ES++ Y RM
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 234 CFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGC 293
G+ + T+ ++K C+ G+ + I ++ N++V NAL+ Y G
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI-EVSSHRCNLYVCNALISMYKRFGK 234
Query: 294 LVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRS------- 346
+ A++ F+ + + +SWN++++ + L +A +L M L G S+ +
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 347 -------------LVGL---------------LNSCSRAEEIGLGKQIHCHALK-LGFDE 377
+VG+ L +CS + GK HC ++ F
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 378 GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLM 437
+ +++LI MY +CSD+ + VF+ + +L NS+++ ++ +++ L M
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 438 IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVAC-SLMDAYSRC 496
+ G P+ +T ++ L + + HC+ L+ D + SL+D Y++
Sbjct: 415 LLSGFHPNHITLASILPLFA--RVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKS 472
Query: 497 GHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL 556
G + + ++F+++ + + +TS+I+GY R G G+ LA M G+KPD +T + L
Sbjct: 473 GEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Query: 557 TGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRD 616
+ C+H+ +V+EG LF M+ V G++ H+SCMVDL CRAG P +
Sbjct: 533 SACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPS 592
Query: 617 CFMWSSLLRSCRSHKNEEVGTRAA-QVLVELDPDDPAVWLQASNFYAEIGNF 667
M ++LL++C H N +G AA ++L+E P+ ++ ++ YA G++
Sbjct: 593 SAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 75 DCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEM 132
DC+ N +D + KS ++ +A VF +M RD VTY LI + E AL + +M
Sbjct: 457 DCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM 516
Query: 133 GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVK-FGFLSNVFVGGTLVGFYLNVGL 191
GI+ T +VL+ C+ S REG + ++ FG + +V Y G
Sbjct: 517 DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGY 576
Query: 192 REVARELFDELP 203
+ AR++F +P
Sbjct: 577 LDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/592 (24%), Positives = 271/592 (45%), Gaps = 46/592 (7%)
Query: 119 CFPPEQALHLYGEMGLLGIRETSTTF-----SSVLAVCARSGFHREGVQVHCRVVKFGFL 173
C Q + LL + S F +S+L+ C G Q+H + G
Sbjct: 56 CISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 174 SNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM 233
+ + LV FY L + A+ + + + WNVL+ + +ES++ Y RM
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 234 CFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGC 293
G+ + T+ ++K C+ G+ + I ++ N++V NAL+ Y G
Sbjct: 176 MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI-EVSSHRCNLYVCNALISMYKRFGK 234
Query: 294 LVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRS------- 346
+ A++ F+ + + +SWN++++ + L +A +L M L G S+ +
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 347 -------------LVGL---------------LNSCSRAEEIGLGKQIHCHALK-LGFDE 377
+VG+ L +CS + GK HC ++ F
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 378 GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLM 437
+ +++LI MY +CSD+ + VF+ + +L NS+++ ++ +++ L M
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 438 IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVAC-SLMDAYSRC 496
+ G P+ +T ++ L + + HC+ L+ D + SL+D Y++
Sbjct: 415 LLSGFHPNHITLASILPLFA--RVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKS 472
Query: 497 GHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL 556
G + + ++F+++ + + +TS+I+GY R G G+ LA M G+KPD +T + L
Sbjct: 473 GEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Query: 557 TGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRD 616
+ C+H+ +V+EG LF M+ V G++ H+SCMVDL CRAG P +
Sbjct: 533 SACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPS 592
Query: 617 CFMWSSLLRSCRSHKNEEVGTRAA-QVLVELDPDDPAVWLQASNFYAEIGNF 667
M ++LL++C H N +G AA ++L+E P+ ++ ++ YA G++
Sbjct: 593 SAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 75 DCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEM 132
DC+ N +D + KS ++ +A VF +M RD VTY LI + E AL + +M
Sbjct: 457 DCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM 516
Query: 133 GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVK-FGFLSNVFVGGTLVGFYLNVGL 191
GI+ T +VL+ C+ S REG + ++ FG + +V Y G
Sbjct: 517 DRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGY 576
Query: 192 REVARELFDELP 203
+ AR++F +P
Sbjct: 577 LDKARDIFHTIP 588
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 248/486 (51%), Gaps = 8/486 (1%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGL 134
+Y N I + ++ DL A VF +MP ++TVT+ +I + ++A L+ +
Sbjct: 117 IYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVK 176
Query: 135 LGIRETST-TFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE 193
GIR T+ F +L +C+R G QVH +VK G + N+ V +LV FY G
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELT 235
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
A FD + E+++ W ++ G +++ + M PN T C +LK CS
Sbjct: 236 SALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACS 295
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWN 313
+ L G+++ S ++K +++++FV +L+D Y+ CG + +K F+ + N ++W
Sbjct: 296 EEKALRFGRQVHSLVVKR-MIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWT 354
Query: 314 SLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL 373
S+++ +A +A+ LF +M+ + ++V +L +C + LGK++H +K
Sbjct: 355 SIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN 414
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVEL 433
E +V+ S L+ +Y KC + + V + L R + ++++ S G + ++
Sbjct: 415 SI-EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDF 473
Query: 434 FGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAY 493
MI EG+ P+ T+S+ LKA + S S S +H A K+ + V +L+ Y
Sbjct: 474 LKEMIQEGVEPNPFTYSSALKACANSESLLIGRS--IHSIAKKNHALSNVFVGSALIHMY 531
Query: 494 SRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFL 553
++CG V + ++F+++ N + + +MI GYARNG ++ L +++ M +G + D+ F
Sbjct: 532 AKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFA 591
Query: 554 CALTGC 559
L+ C
Sbjct: 592 TILSTC 597
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 203/407 (49%), Gaps = 6/407 (1%)
Query: 176 VFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCF 235
++ G L+ + +G AR++FD +PE+N W ++ G+ + G +E+ +
Sbjct: 117 IYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVK 176
Query: 236 DGVE-PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCL 294
G+ N F LL +CS G+++ ++K+G N+ V ++LV FY+ CG L
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV--GNLIVESSLVYFYAQCGEL 234
Query: 295 VGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSC 354
A ++F+ + ++VISW +++S + A+ +F M P+ ++ +L +C
Sbjct: 235 TSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKAC 294
Query: 355 SRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC 414
S + + G+Q+H +K + V ++L+DMY KC +I VF+ ++ R
Sbjct: 295 SEEKALRFGRQVHSLVVKRMI-KTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTW 353
Query: 415 NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFA 474
S++ + + G ++ + LF +M L+ + +T + L+A S A +L H
Sbjct: 354 TSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG-SVGALLLGKEL-HAQI 411
Query: 475 LKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGL 534
+K+ +E + + +L+ Y +CG + + + L S + + +T+MI+G + G + L
Sbjct: 412 IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEAL 471
Query: 535 AVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
L M+++G++P+ T+ AL C ++ + GR + K H +
Sbjct: 472 DFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL 518
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 197/391 (50%), Gaps = 10/391 (2%)
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
K++ + LK F + I+ N L+ G LV A+K F+++P +N ++W +++
Sbjct: 102 KRIHAMALKC-FDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLK 160
Query: 322 NDLLCDALELFTVMQLWG-QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSV 380
L +A LF G + + R V LLN CSR E LG+Q+H + +K+G G++
Sbjct: 161 YGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV--GNL 218
Query: 381 HAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDE 440
+S+L+ Y +C ++ S++ F+ + ++ + +++++ S G + +F M++
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNH 278
Query: 441 GLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE 500
+P+E T + LKA S + F + +H +K ++ D V SLMD Y++CG +
Sbjct: 279 WFLPNEFTVCSILKACSEEKALRF--GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 501 LSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCN 560
++F+ +S+ N + +TS+I +AR G G++ +++ M + L + +T + L C
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG 396
Query: 561 HTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMW 620
G + G+ L + + ++ + S +V L C+ G Q P RD W
Sbjct: 397 SVGALLLGKELHAQIIK-NSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS-RDVVSW 454
Query: 621 SSLLRSCRS--HKNEEVGTRAAQVLVELDPD 649
++++ C S H++E + + ++P+
Sbjct: 455 TAMISGCSSLGHESEALDFLKEMIQEGVEPN 485
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 141/284 (49%), Gaps = 3/284 (1%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGL 134
V+ +D + K +++ VF M R+TVT+ +I+A E+A+ L+ M
Sbjct: 319 VFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKR 378
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
+ + T S+L C G G ++H +++K NV++G TLV Y G
Sbjct: 379 RHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRD 438
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A + +LP R++ W ++ G LG E+L++ M +GVEPN T+ LK C+N
Sbjct: 439 AFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACAN 498
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
L G+ + S I K SN+FV +AL+ Y+ CG + A + F+++P +N++SW +
Sbjct: 499 SESLLIGRSIHS-IAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKA 557
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAE 358
++ A N +AL+L M+ G +L++C E
Sbjct: 558 MIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIE 601
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 216/444 (48%), Gaps = 49/444 (11%)
Query: 297 AKKSFEAIPVENVISWNSLVS--VNADNDLLCDALELF-TVMQLWGQSPSVRSLVGLLNS 353
A K F +P N SWN+++ +D D A+ LF +M P+ + +L +
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 354 CSRAEEIGLGKQIHCHALKLGF--DE---------------------------------- 377
C++ +I GKQIH ALK GF DE
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 378 --------GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQD 429
G + + +ID Y + D +++ +F+ + +R++ N++++ S G +D
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 430 VVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSL 489
VE+F M + P+ VT + L A+S S + LH +A SG+ D + +L
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLEL--GEWLHLYAEDSGIRIDDVLGSAL 315
Query: 490 MDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDE 549
+D YS+CG +E ++ +FE L N I +++MING+A +G + M + G++P +
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 550 ITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXX 609
+ ++ LT C+H G+V+EGR F M SV G++P H+ CMVDLL R+G
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 610 QTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDA 669
P K D +W +LL +CR N E+G R A +L+++ P D ++ SN YA GN+
Sbjct: 436 NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 495
Query: 670 SREIREVALARKMTREIGHSSIEI 693
E+R + + ++ G S I+I
Sbjct: 496 VSEMRLRMKEKDIRKDPGCSLIDI 519
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 194/443 (43%), Gaps = 65/443 (14%)
Query: 158 REGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLR----EVARELFDELPERNLAVWNVL 213
R+ Q+H +K G + + ++ F L + A ++F+++P+RN WN +
Sbjct: 37 RDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTI 96
Query: 214 LRGFCE----LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
+RGF E + +L +Y M + VEPN TF +LK C+ ++ EGK++ L
Sbjct: 97 IRGFSESDEDKALIAITL-FYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 270 KMGF-----VESN---------------------------------------IFVANALV 285
K GF V SN I + N ++
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 286 DFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVR 345
D Y G A+ F+ + +V+SWN+++S + N DA+E+F M+ P+
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275
Query: 346 SLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFES 405
+LV +L + SR + LG+ +H +A G V SALIDMY KC IE ++ VFE
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG-SALIDMYSKCGIIEKAIHVFER 334
Query: 406 LTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALS---VSASA 462
L + + ++++ + G D ++ F M G+ P +V + L A S +
Sbjct: 335 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 394
Query: 463 TFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQ-IFETLSSPNAICFTSMI 521
SQ++ L+ +E C ++D R G ++ + + I P+ + + +++
Sbjct: 395 RRYFSQMVSVDGLEPRIE---HYGC-MVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Query: 522 NGYARNG---MGKQGLAVLHAMV 541
G MGK+ +L MV
Sbjct: 451 GACRMQGNVEMGKRVANILMDMV 473
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 159/352 (45%), Gaps = 51/352 (14%)
Query: 91 RDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQ----ALHLYGEMGLLGIRETST-TFS 145
RDL+ A +F+ MP R+ ++N +I + E A+ L+ EM E + TF
Sbjct: 73 RDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFP 132
Query: 146 SVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV------GF-------------- 185
SVL CA++G +EG Q+H +K+GF + FV LV GF
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 186 -------------------------YLNVGLREVARELFDELPERNLAVWNVLLRGFCEL 220
Y+ +G + AR LFD++ +R++ WN ++ G+
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
G ++++ + M + PN VT +L S L G+ L G ++ +
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-L 311
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
+AL+D YS CG + A FE +P ENVI+W+++++ A + DA++ F M+ G
Sbjct: 312 GSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 371
Query: 341 SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGK 392
PS + + LL +CS + G++ + + E + ++D+ G+
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGR 423
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 3/239 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIR 138
N ID +++ D +A +F M R V++N +IS + + A+ ++ EM IR
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
T SVL +R G G +H G + +G L+ Y G+ E A +
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
F+ LP N+ W+ ++ GF G ++++ + +M GV P+ V + LL CS+ +
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
EG++ S ++ + +E I +VD G L A++ +P++ + + W +L+
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/333 (18%), Positives = 130/333 (39%), Gaps = 62/333 (18%)
Query: 351 LNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSAL-----IDMYGKCSDIESSVAVFES 405
+N+C ++ QIH +K G ++ A L D++ + D++ + +F
Sbjct: 30 INNCRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQ 84
Query: 406 LTKRTLECCNSLMTSLSHCGATQDVVEL---FGLMIDEGLMPDEVTFSTTLKALSVSASA 462
+ +R N+++ S + ++ + + +M DE + P+ TF + LKA + +
Sbjct: 85 MPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA--CAKTG 142
Query: 463 TFTSSQLLHCFALKSGVEGDAAVACSL--------------------------------- 489
+ +H ALK G GD V +L
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 490 ------------MDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVL 537
+D Y R G + + +F+ + + + + +MI+GY+ NG K + V
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 538 HAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR 597
M + ++P+ +T + L + G ++ G L + G++ D S ++D+ +
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAED-SGIRIDDVLGSALIDMYSK 321
Query: 598 AGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSH 630
G + P + + WS+++ H
Sbjct: 322 CGIIEKAIHVFERLP-RENVITWSAMINGFAIH 353
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 243/453 (53%), Gaps = 16/453 (3%)
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
+L++C+ + + E K I+++ +E ++ + N L++ YS CG + A++ F+ +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRID-LEGDVTLLNVLINAYSKCGFVELARQVFDGMLER 125
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
+++SWN+++ + N + +AL++F M+ G S ++ +L++C + K++H
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 368 CHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGAT 427
C ++K D +++ +AL+D+Y KC I+ +V VFES+ ++ +S++
Sbjct: 186 CLSVKTCIDL-NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVAC 487
++ + L+ L ++ T S+ + A S A + +H KSG + VA
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICA--CSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 488 SLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKP 547
S +D Y++CG + S IF + N + ++I+G+A++ K+ + + M + G+ P
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 362
Query: 548 DEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXX 607
+E+TF L+ C HTG+V+EGR F M++ +G+ P+ H+SCMVD+L RAG
Sbjct: 363 NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 422
Query: 608 XXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNF 667
P +W SLL SCR +KN E+ AA+ L EL+P++ + SN YA
Sbjct: 423 IKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYA----- 477
Query: 668 DASREIREVALARKMTREI------GHSSIEIR 694
A+++ E+A +RK+ R+ G S I+I+
Sbjct: 478 -ANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIK 509
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 159/307 (51%), Gaps = 2/307 (0%)
Query: 147 VLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERN 206
+L +CAR+G E H ++++ +V + L+ Y G E+AR++FD + ER+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 207 LAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQS 266
L WN ++ + E+L+ + M +G + + T +L C + E KKL
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH- 185
Query: 267 CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLC 326
C+ ++ N++V AL+D Y+ CG + A + FE++ ++ ++W+S+V+ N
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 327 DALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSAL 386
+AL L+ Q + +L ++ +CS + GKQ+H K GF +V S+
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG-SNVFVASSA 304
Query: 387 IDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDE 446
+DMY KC + S +F + ++ LE N++++ + ++V+ LF M +G+ P+E
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 447 VTFSTTL 453
VTFS+ L
Sbjct: 365 VTFSSLL 371
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 5/326 (1%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETS 141
I+A+ K + A VF M R V++N +I + +AL ++ EM G + +
Sbjct: 103 INAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSE 162
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
T SSVL+ C + E ++HC VK N++VG L+ Y G+ + A ++F+
Sbjct: 163 FTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFES 222
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+ +++ W+ ++ G+ + EE+L Y R +E N T ++ CSN L EG
Sbjct: 223 MQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG 282
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
K++ + I K GF SN+FVA++ VD Y+ CG L + F + +N+ WN+++S A
Sbjct: 283 KQMHAVICKSGF-GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ-IHCHALKLGFDEGSV 380
+ + + LF MQ G P+ + LL+ C + G++ G V
Sbjct: 342 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVV 401
Query: 381 HAQSALIDMYGKCSDIESSVAVFESL 406
H S ++D+ G+ + + + +S+
Sbjct: 402 H-YSCMVDILGRAGLLSEAYELIKSI 426
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 121/244 (49%), Gaps = 3/244 (1%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGL 134
+Y +D + K + A+ VF +M + +VT++ +++ + E+AL LY
Sbjct: 197 LYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQR 256
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
+ + + T SSV+ C+ EG Q+H + K GF SNVFV + V Y G
Sbjct: 257 MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 316
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
+ +F E+ E+NL +WN ++ GF + +E + + +M DG+ PN VTF LL VC +
Sbjct: 317 SYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 376
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS-WN 313
+ EG++ + + N+ + +VD G L A + ++IP + S W
Sbjct: 377 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWG 436
Query: 314 SLVS 317
SL++
Sbjct: 437 SLLA 440
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 260/512 (50%), Gaps = 36/512 (7%)
Query: 195 ARELFDELPERNLA-VWNVLLRGFCELGCVEESLNYYSRM----CFDGVEPNGVTFCYLL 249
AR+LFD+ P+R+ + + N +++ + E +S Y + CF P+ TF L
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCF---APDNFTFTTLT 85
Query: 250 KVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV 309
K CS + +G +L S I + GF ++++V+ +VD Y+ G + A+ +F+ +P +
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFC-ADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE 144
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLV---GLLNSCSRAEEIGLGKQI 366
+SW +L+S + C L+L + +L+ Q P V+ +V +++ ++ ++ +++
Sbjct: 145 VSWTALIS----GYIRCGELDLAS--KLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL 198
Query: 367 HCHALKLGFDE---GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH 423
FDE +V + +I Y DI+++ +F+++ +R L N+++
Sbjct: 199 --------FDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQ 250
Query: 424 CGATQDVVELFGLM-IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGD 482
Q+ + LF M L PD+VT + L A +S + + + HCF + ++
Sbjct: 251 NKQPQEGIRLFQEMQATTSLDPDDVTILSVLPA--ISDTGALSLGEWCHCFVQRKKLDKK 308
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAV-LHAMV 541
V +++D YS+CG +E + +IF+ + + +MI+GYA NG + L + + M+
Sbjct: 309 VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMI 368
Query: 542 EKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXX 601
E+ KPDEIT L +T CNH G+V+EGR F M+ + G+ H+ CMVDLL RAG
Sbjct: 369 EE--KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSL 425
Query: 602 XXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFY 661
P + + + SS L +C +K+ E R + VEL+P + ++ N Y
Sbjct: 426 KEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLY 485
Query: 662 AEIGNFDASREIREVALARKMTREIGHSSIEI 693
A +D ++ V + +E+G S IEI
Sbjct: 486 AADKRWDDFGMVKNVMRKNQAKKEVGCSLIEI 517
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 173/391 (44%), Gaps = 49/391 (12%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYG 130
R D + N I A++++R + A++ RD L CF P+
Sbjct: 36 RPQRDDSFLSNSMIKAYLETRQYPDSFALY-----RD------LRKETCFAPD------- 77
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
+ TF+++ C+ S +G+Q+H ++ +FGF ++++V +V Y G
Sbjct: 78 ----------NFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFG 127
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM--CFDGVEPNGVT--FC 246
AR FDE+P R+ W L+ G+ G ++ + + +M D V N + F
Sbjct: 128 KMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFV 187
Query: 247 YLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV 306
+ S R +E + ++ Y + A+K F+A+P
Sbjct: 188 KSGDMTSARRLFDE------------MTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPE 235
Query: 307 ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEIGLGKQ 365
N++SWN+++ N + + LF MQ P +++ +L + S + LG+
Sbjct: 236 RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEW 295
Query: 366 IHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG 425
HC + D+ V +A++DMY KC +IE + +F+ + ++ + N+++ + G
Sbjct: 296 CHCFVQRKKLDK-KVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNG 354
Query: 426 ATQDVVELF-GLMIDEGLMPDEVTFSTTLKA 455
+ ++LF +MI+E PDE+T + A
Sbjct: 355 NARAALDLFVTMMIEEK--PDEITMLAVITA 383
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 169/360 (46%), Gaps = 21/360 (5%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGL 134
+Y +D + K + A F MP R V++ LIS + C + A L+ +M
Sbjct: 113 MYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH 172
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSN--VFVGGTLVGFYLNVGLR 192
+ V+ GF + G R + F +++ V T++ Y N+
Sbjct: 173 VK--------DVVIYNAMMDGFVKSGDMTSARRL-FDEMTHKTVITWTTMIHGYCNIKDI 223
Query: 193 EVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM-CFDGVEPNGVTFCYLLKV 251
+ AR+LFD +PERNL WN ++ G+C+ +E + + M ++P+ VT +L
Sbjct: 224 DAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPA 283
Query: 252 CSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS 311
S+ L+ G+ C ++ ++ + V A++D YS CG + AK+ F+ +P + V S
Sbjct: 284 ISDTGALSLGEWCH-CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS 342
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
WN+++ A N AL+LF M + + P +++ ++ +C+ + G++
Sbjct: 343 WNAMIHGYALNGNARAALDLFVTMMI-EEKPDEITMLAVITACNHGGLVEEGRKWFHVMR 401
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS-LSHCGATQDV 430
++G + + ++D+ G+ ++ + + +T E +++S LS CG +D+
Sbjct: 402 EMGLN-AKIEHYGCMVDLLGRAGSLKEAEDL---ITNMPFEPNGIILSSFLSACGQYKDI 457
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 210/397 (52%), Gaps = 7/397 (1%)
Query: 301 FEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
F ++P+ + +NS++ + L + + M SPS + ++ SC+ +
Sbjct: 64 FLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSAL 123
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
+GK +HCHA+ GF + + Q+AL+ Y KC D+E + VF+ + ++++ NSL++
Sbjct: 124 RIGKGVHCHAVVSGFGLDT-YVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 421 LSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
G + +++F M + G PD TF + L A + + + + S +H + + G++
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGS--WVHQYIISEGLD 240
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAM 540
+ + +L++ YSRCG V + ++F+ + N +T+MI+ Y +G G+Q + + + M
Sbjct: 241 LNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 541 VEK-GLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+ G P+ +TF+ L+ C H G+V+EGR ++ M + + P H CMVD+L RAG
Sbjct: 301 EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAG 360
Query: 600 XXXXXXXXXXQ---TPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQ 656
Q T +W+++L +C+ H+N ++G A+ L+ L+PD+P +
Sbjct: 361 FLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVM 420
Query: 657 ASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
SN YA G D IR+ + + +++G+S IE+
Sbjct: 421 LSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEV 457
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 159/326 (48%), Gaps = 4/326 (1%)
Query: 99 VFHTMPLRDTVTYNLLI--SAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGF 156
+F ++PL D +N +I ++ P + Y M + ++ TF+SV+ CA
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 157 HREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRG 216
R G VHC V GF + +V LV FY G E AR++FD +PE+++ WN L+ G
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 217 FCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVES 276
F + G +E++ + +M G EP+ TF LL C+ ++ G + I+ G ++
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG-LDL 241
Query: 277 NIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ 336
N+ + AL++ YS CG + A++ F+ + NV +W +++S + A+ELF M+
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKME 301
Query: 337 -LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD 395
G P+ + V +L++C+ A + G+ ++ K V ++DM G+
Sbjct: 302 DDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGF 361
Query: 396 IESSVAVFESLTKRTLECCNSLMTSL 421
++ + L +L T++
Sbjct: 362 LDEAYKFIHQLDATGKATAPALWTAM 387
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLL 135
Y + + + K D+ A VF MP + V +N L+S + ++A+ ++ +M
Sbjct: 143 YVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRES 202
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
G S TF S+L+ CA++G G VH ++ G NV +G L+ Y G A
Sbjct: 203 GFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKA 262
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFD-GVEPNGVTFCYLLKVCSN 254
RE+FD++ E N+A W ++ + G ++++ +++M D G PN VTF +L C++
Sbjct: 263 REVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAH 322
Query: 255 HRRLNEGKKLQSCILK 270
+ EG+ + + K
Sbjct: 323 AGLVEEGRSVYKRMTK 338
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 133/286 (46%), Gaps = 8/286 (2%)
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH 423
+Q+H H + G+ S + LI + I + +F S+ NS++ S S
Sbjct: 26 QQVHAHLIVTGYGR-SRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSK 84
Query: 424 CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDA 483
V + M+ + P TF++ +K S + + + +HC A+ SG D
Sbjct: 85 LRLPLHCVAYYRRMLSSNVSPSNYTFTSVIK--SCADLSALRIGKGVHCHAVVSGFGLDT 142
Query: 484 AVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEK 543
V +L+ YS+CG +E + Q+F+ + + + + S+++G+ +NG+ + + V + M E
Sbjct: 143 YVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRES 202
Query: 544 GLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXX 603
G +PD TF+ L+ C TG V G + + S G+ + + + +++L R G
Sbjct: 203 GFEPDSATFVSLLSACAQTGAVSLGSWVHQYIIS-EGLDLNVKLGTALINLYSRCGDVGK 261
Query: 604 XXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPD 649
+ + + W++++ + +H G +A ++ +++ D
Sbjct: 262 AREVFDKMKET-NVAAWTAMISAYGTHG---YGQQAVELFNKMEDD 303
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 208 bits (530), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 228/484 (47%), Gaps = 16/484 (3%)
Query: 123 EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL 182
+ L + EM LG+ + S+V A + R+G++ H +K G ++VF+ +L
Sbjct: 196 QDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSL 255
Query: 183 VGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFD-GVEPN 241
V Y G +AR +FDE+ ER++ VW ++ G E+L + M + + PN
Sbjct: 256 VDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPN 315
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
V +L V + + L GK++ + +LK FV + L+D Y CG + ++ F
Sbjct: 316 SVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVF 375
Query: 302 EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
N ISW +L+S A N AL MQ G P V ++ +L C+ I
Sbjct: 376 YGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIK 435
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSL 421
GK+IHC+ALK F +V ++L+ MY KC E + +F+ L +R ++ +++
Sbjct: 436 QGKEIHCYALKNLFLP-NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCY 494
Query: 422 SHCGATQDVVELFGLMIDEGLMPDEVTFS------TTLKALSVSASATFTSSQLLHCFAL 475
+ +E+F LM+ PD VT + LKAL + LH L
Sbjct: 495 VENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKE--------LHGHIL 546
Query: 476 KSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLA 535
K E V+ ++ Y +CG + + F+ ++ ++ +T++I Y N + + +
Sbjct: 547 KKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAIN 606
Query: 536 VLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLL 595
MV +G P+ TF L+ C+ G V E F+ M ++ +QP + H+S +++LL
Sbjct: 607 CFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELL 666
Query: 596 CRAG 599
R G
Sbjct: 667 NRCG 670
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 231/515 (44%), Gaps = 14/515 (2%)
Query: 60 SFIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC 119
S IR T P RE DAF S L+S + ++ I A
Sbjct: 38 SPIRPSRTRRPSTSPAKKPKPFRERDAFPSSLPLHSKNPYI--------IHRDIQIFARQ 89
Query: 120 FPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVG 179
E AL + + GI +TTFS++L C R G QVH + G SN F+
Sbjct: 90 NNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLR 149
Query: 180 GTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGC--VEESLNYYSRMCFDG 237
LV Y G + A+++FDE N+ WN LLRG G ++ L+ ++ M G
Sbjct: 150 TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELG 209
Query: 238 VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGA 297
V+ N + + K + L +G K + +K G S +F+ +LVD Y CG + A
Sbjct: 210 VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNS-VFLKTSLVDMYFKCGKVGLA 268
Query: 298 KKSFEAIPVENVISWNSLVSVNADNDLLCDALELF-TVMQLWGQSPSVRSLVGLLNSCSR 356
++ F+ I +++ W ++++ A N +AL LF T++ P+ L +L
Sbjct: 269 RRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGD 328
Query: 357 AEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNS 416
+ + LGK++H H LK S LID+Y KC D+ S VF +R +
Sbjct: 329 VKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTA 388
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
LM+ + G + M EG PD VT +T L + + +HC+ALK
Sbjct: 389 LMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPV--CAELRAIKQGKEIHCYALK 446
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAV 536
+ + ++ SLM YS+CG E +++F+ L N +T+MI+ Y N + G+ V
Sbjct: 447 NLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEV 506
Query: 537 LHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRIL 571
M+ +PD +T LT C+ +K G+ L
Sbjct: 507 FRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKEL 541
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 154/318 (48%), Gaps = 3/318 (0%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETS 141
ID + K D+ S VF+ R+ +++ L+S + +QAL M G R
Sbjct: 359 IDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDV 418
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
T ++VL VCA ++G ++HC +K FL NV + +L+ Y G+ E LFD
Sbjct: 419 VTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDR 478
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
L +RN+ W ++ + E + + + M P+ VT +L VCS+ + L G
Sbjct: 479 LEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLG 538
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
K+L ILK F ES FV+ ++ Y CG L A SF+A+ V+ ++W +++
Sbjct: 539 KELHGHILKKEF-ESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGC 597
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
N+L DA+ F M G +P+ + +L+ CS+A + + L++ + S
Sbjct: 598 NELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEE 657
Query: 382 AQSALIDMYGKCSDIESS 399
S +I++ +C +E +
Sbjct: 658 HYSLVIELLNRCGRVEEA 675
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
R S T VL VC+ + G ++H ++K F S FV ++ Y G A
Sbjct: 516 RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANF 575
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVE---ESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
FD + + W ++ + GC E +++N + +M G PN TF +L +CS
Sbjct: 576 SFDAVAVKGSLTWTAIIEAY---GCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQ 632
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKK 299
++E + + +L+M ++ + + +++ + CG + A++
Sbjct: 633 AGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQR 677
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 249/501 (49%), Gaps = 13/501 (2%)
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A LFDE+P R++ WN ++ G E G + ++ + M E + V++ ++ C
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM----PERSVVSWTAMVNGCFR 140
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
++++ ++L +M ++ + N++V Y G + A K F+ +P +NVISW +
Sbjct: 141 SGKVDQAERL---FYQMPVKDTAAW--NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTT 195
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
++ N+ +AL+LF M + R ++ +C+ A +G Q+H +KLG
Sbjct: 196 MICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLG 255
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF 434
F + ++LI Y C I S VF+ + +L++ S +D + +F
Sbjct: 256 FLYEE-YVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIF 314
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYS 494
M+ ++P++ TF++ L S SA T + +H A+K G+E DA V SL+ YS
Sbjct: 315 SGMLRNSILPNQSTFASGLN--SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYS 372
Query: 495 RCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
G+V ++ +F + + + + S+I G A++G GK + M+ +PDEITF
Sbjct: 373 DSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTG 432
Query: 555 ALTGCNHTGMVKEGRILFDSMKS-VHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPD 613
L+ C+H G +++GR LF M S ++ + +H++CMVD+L R G +
Sbjct: 433 LLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVV 492
Query: 614 KRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREI 673
K + +W +LL +CR H + + G +AA + LD A ++ SN YA G + ++
Sbjct: 493 KPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKL 552
Query: 674 REVALARKMTREIGHSSIEIR 694
R + ++ G S + IR
Sbjct: 553 RVKMKKNGIMKKPGSSWVVIR 573
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 229/498 (45%), Gaps = 46/498 (9%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISA--WCFPPEQALHLYG 130
PS V + I + +S L AL +F MP+RD V++N +IS C A+ L+
Sbjct: 62 PSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFD 121
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
EM + ++++++ C RSG + ++ ++ + + ++V YL G
Sbjct: 122 EMP----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMP----VKDTAAWNSMVHGYLQFG 173
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
+ A +LF ++P +N+ W ++ G + E+L+ + M ++ F ++
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVIT 233
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVI 310
C+N + G ++ I+K+GF+ +V+ +L+ FY+ C + ++K F+ E V
Sbjct: 234 ACANAPAFHMGIQVHGLIIKLGFLYEE-YVSASLITFYANCKRIGDSRKVFDEKVHEQVA 292
Query: 311 SWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
W +L+S + N DAL +F+ M P+ + LNSCS + GK++H A
Sbjct: 293 VWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVA 352
Query: 371 LKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
+KLG E ++L+ MY ++ +V+VF + K+++ NS++ + G +
Sbjct: 353 VKLGL-ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 431 VELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLM 490
+FG MI PDE+TF+ L A S HC L+ G + ++ +
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACS-------------HCGFLEKGRKLFYYMSSGI- 457
Query: 491 DAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEI 550
H++ +Q +T M++ R G K+ ++ MV +KP+E+
Sbjct: 458 ------NHIDRKIQ-----------HYTCMVDILGRCGKLKEAEELIERMV---VKPNEM 497
Query: 551 TFLCALTGCNHTGMVKEG 568
+L L+ C V G
Sbjct: 498 VWLALLSACRMHSDVDRG 515
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 145/326 (44%), Gaps = 23/326 (7%)
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSL 315
RR++E +++ + + ++ + ++ Y+ LV A F+ +PV +V+SWNS+
Sbjct: 49 RRIDEAREVFNQV-----PSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSM 103
Query: 316 VSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGF 375
+S + + A++LF M SV S ++N C R+ GK L
Sbjct: 104 ISGCVECGDMNTAVKLFDEM----PERSVVSWTAMVNGCFRS-----GKVDQAERLFYQM 154
Query: 376 DEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFG 435
A ++++ Y + ++ ++ +F+ + + + +++ L + + ++LF
Sbjct: 155 PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFK 214
Query: 436 LMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSR 495
M+ + F+ + A + + F +H +K G + V+ SL+ Y+
Sbjct: 215 NMLRCCIKSTSRPFTCVITA--CANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYAN 272
Query: 496 CGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCA 555
C + S ++F+ +T++++GY+ N + L++ M+ + P++ TF
Sbjct: 273 CKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASG 332
Query: 556 LTGCNHTGMVKEGRILFDSMKSVHGV 581
L C+ G + G K +HGV
Sbjct: 333 LNSCSALGTLDWG-------KEMHGV 351
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 242/510 (47%), Gaps = 35/510 (6%)
Query: 160 GVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCE 219
G +H +V G + LV FY+ G AR++FDE+P+R+++ V++
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
G +ESL+++ M DG++ + LLK N GK + +LK + ES+ F
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSY-ESDAF 153
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
+ ++L+D YS G + A+K F + ++++ +N+++S A+N +AL L M+L G
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
P V + L++ S +E V L+ + G D+ S
Sbjct: 214 IKPDVITWNALISGFSHMR-----------------NEEKVSEILELMCLDGYKPDVVS- 255
Query: 400 VAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
S+++ L H + + F M+ GL P+ T T L A +
Sbjct: 256 --------------WTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA--CT 299
Query: 460 ASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTS 519
A + +H +++ +G+E V +L+D Y +CG + ++ +F + F S
Sbjct: 300 TLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNS 359
Query: 520 MINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVH 579
MI YA +G+ + + + M G K D +TF LT C+H G+ G+ LF M++ +
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKY 419
Query: 580 GVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRA 639
+ P H++CMVDLL RAG + D F+W +LL +CR+H N E+ A
Sbjct: 420 RIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIA 479
Query: 640 AQVLVELDPDDPAVWLQASNFYAEIGNFDA 669
A+ L EL+P++ L ++ YA G++++
Sbjct: 480 AKHLAELEPENSGNGLLLTSLYANAGSWES 509
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 175/366 (47%), Gaps = 39/366 (10%)
Query: 96 ALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCAR 153
A VF MP RD ++I A +++L + EM G++ + S+L +R
Sbjct: 70 ARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLK-ASR 128
Query: 154 SGFHRE-GVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNV 212
+ RE G +HC V+KF + S+ F+ +L+ Y G AR++F +L E++L V+N
Sbjct: 129 NLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNA 188
Query: 213 LLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMG 272
++ G+ +E+LN M G++P+ +T+ L+ S+ R NE K S IL++
Sbjct: 189 MISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMR--NEEK--VSEILEL- 243
Query: 273 FVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELF 332
CL G K +V+SW S++S N A + F
Sbjct: 244 -------------------MCLDGYKP--------DVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 333 TVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGF-DEGSVHAQSALIDMYG 391
M G P+ +++ LL +C+ + GK+IH +++ G D G V +SAL+DMYG
Sbjct: 277 KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFV--RSALLDMYG 334
Query: 392 KCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFST 451
KC I ++ +F K+T NS++ ++ G VELF M G D +TF+
Sbjct: 335 KCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTA 394
Query: 452 TLKALS 457
L A S
Sbjct: 395 ILTACS 400
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 7/248 (2%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWC--FPPEQALHLYG 130
V T N I F R+ + M L D V++ +IS F E+A +
Sbjct: 218 VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFK 277
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
+M G+ S T ++L C + + G ++H V G + FV L+ Y G
Sbjct: 278 QMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCG 337
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
A LF + P++ +N ++ + G ++++ + +M G + + +TF +L
Sbjct: 338 FISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILT 397
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NV 309
CS+ + G+ L + + + +VD G LV A + +A+ +E ++
Sbjct: 398 ACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDL 457
Query: 310 ISWNSLVS 317
W +L++
Sbjct: 458 FVWGALLA 465
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 264/538 (49%), Gaps = 51/538 (9%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLV-GFYLNV-GLREVARELFDELPERNLAVWNVLLRGFCE 219
Q+H +V G +SN+ V G L+ L+V G + A +LFDE+P+ ++++ N +LRG +
Sbjct: 30 QIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQ 89
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
E++++ Y+ M GV P+ TF ++LK CS + G +++ GFV N +
Sbjct: 90 SMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV-LNEY 148
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
V NAL+ F++ CG L A + F+ + ++W+S+ S A + +A+ LF M
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKD 208
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
Q + G L KC +++S+
Sbjct: 209 QVAWNVMITGCL----------------------------------------KCKEMDSA 228
Query: 400 VAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
+F+ T++ + N++++ +CG ++ + +F M D G PD VT + L A +V
Sbjct: 229 RELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVL 288
Query: 460 ASATFTSSQLLHCFALK-----SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNA 514
+ + LH + L+ S + + +L+D Y++CG ++ ++++F + +
Sbjct: 289 GD--LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 346
Query: 515 ICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDS 574
+ ++I G A + + + + M + P+E+TF+ + C+H+G V EGR F
Sbjct: 347 STWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSL 405
Query: 575 MKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEE 634
M+ ++ ++P+ +H+ CMVD+L RAG + + +W +LL +C+ + N E
Sbjct: 406 MRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVE 465
Query: 635 VGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
+G A + L+ + D+ ++ SN YA G +D +++R++ ++ + G S IE
Sbjct: 466 LGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 158/382 (41%), Gaps = 69/382 (18%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLI--SAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAV 150
L A +F +P D N ++ SA PE+ + LY EM G+ TF+ VL
Sbjct: 62 LKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKA 121
Query: 151 CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE------------- 197
C++ + G H +VV+ GF+ N +V L+ F+ N G +A E
Sbjct: 122 CSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 181
Query: 198 ------------------LFDELPERNLAVWNV--------------------------- 212
LFDE+P ++ WNV
Sbjct: 182 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 241
Query: 213 ----LLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCI 268
++ G+ G +E+L + M G P+ VT LL C+ L GK+L I
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 269 LKMGFVESNIFVA----NALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDL 324
L+ V S+I+V NAL+D Y+ CG + A + F + ++ +WN+L+ V
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLI-VGLALHH 360
Query: 325 LCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQS 384
++E+F MQ P+ + +G++ +CS + + G++ + E ++
Sbjct: 361 AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYG 420
Query: 385 ALIDMYGKCSDIESSVAVFESL 406
++DM G+ +E + ES+
Sbjct: 421 CMVDMLGRAGQLEEAFMFVESM 442
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 262/537 (48%), Gaps = 12/537 (2%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
Q+H ++ + F+ L+ L + + LF N+ ++N L+ GF
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 222 CVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVA 281
E+L+ + + G+ +G TF +LK C+ G L S ++K GF ++
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGF-NHDVAAM 149
Query: 282 NALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQS 341
+L+ YS G L A K F+ IP +V++W +L S + +A++LF M G
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 342 PSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVA 401
P +V +L++C ++ G+ I + ++ + S ++ L+++Y KC +E + +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF-VRTTLVNLYAKCGKMEKARS 268
Query: 402 VFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDE---VTFSTTLKALSV 458
VF+S+ ++ + ++++ + ++ +ELF M+ E L PD+ V F ++ +L
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 459 SASATFTSSQL-LHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICF 517
+ S + H F + +A +L+D Y++CG + ++F+ + + +
Sbjct: 329 LDLGEWGISLIDRHEFLT------NLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIM 382
Query: 518 TSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKS 577
+ I+G A+NG K AV + G+ PD TFL L GC H G++++G F+++
Sbjct: 383 NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 578 VHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGT 637
V+ ++ H+ CMVDL RAG P + + +W +LL CR K+ ++
Sbjct: 443 VYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAE 502
Query: 638 RAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
+ L+ L+P + ++Q SN Y+ G +D + E+R++ + M + G+S IE+
Sbjct: 503 TVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELE 559
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 209/445 (46%), Gaps = 24/445 (5%)
Query: 91 RDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVL 148
R + +F + YN LI+ + + L L+ + G+ TF VL
Sbjct: 59 RQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVL 118
Query: 149 AVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLA 208
C R+ + G+ +H VVK GF +V +L+ Y G A +LFDE+P+R++
Sbjct: 119 KACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVV 178
Query: 209 VWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCI 268
W L G+ G E+++ + +M GV+P+ +L C + L+ G+ + +
Sbjct: 179 TWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 269 LKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDA 328
+M ++ N FV LV+ Y+ CG + A+ F+++ +++++W++++ A N +
Sbjct: 239 EEME-MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEG 297
Query: 329 LELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ----IHCHALKLGFDEGSVHAQS 384
+ELF M P S+VG L+SC+ + LG+ I H ++ +
Sbjct: 298 IELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT-----NLFMAN 352
Query: 385 ALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMP 444
ALIDMY KC + VF+ + ++ + N+ ++ L+ G + +FG G+ P
Sbjct: 353 ALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412
Query: 445 DEVTFSTTL----KALSVSASATFTSSQLLHC-FALKSGVEGDAAVACSLMDAYSRCGHV 499
D TF L A + F ++ + C +ALK VE C ++D + R G +
Sbjct: 413 DGSTFLGLLCGCVHAGLIQDGLRFFNA--ISCVYALKRTVE---HYGC-MVDLWGRAGML 466
Query: 500 ELSLQIF-ETLSSPNAICFTSMING 523
+ + ++ + PNAI + ++++G
Sbjct: 467 DDAYRLICDMPMRPNAIVWGALLSG 491
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 121/274 (44%), Gaps = 6/274 (2%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLL 135
+ + ++ + K + A +VF +M +D VT++ +I + P++ + L+ +M
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
++ + L+ CA G G + + FL+N+F+ L+ Y G
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARG 367
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
E+F E+ E+++ + N + G + G V+ S + + G+ P+G TF LL C +
Sbjct: 368 FEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 427
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNS 314
+ +G + + I + ++ + +VD + G L A + +P+ N I W +
Sbjct: 428 GLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGA 487
Query: 315 LVS---VNADNDLLCDALELFTVMQLWGQSPSVR 345
L+S + D L L+ ++ W V+
Sbjct: 488 LLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 166/638 (26%), Positives = 297/638 (46%), Gaps = 48/638 (7%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLG-I 137
N I ++K A+ VF ++ V+Y LIS + +AL ++ M G +
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFY-LNVGLR-EVA 195
+ TF ++L C R G+Q+H +VK GFL++VFV +L+ Y + G +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC-FDGVEPNGVTFCYLLKVCSN 254
+LFDE+P+R++A WN ++ + G ++ + + M +G + T LL C++
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYS------------------------- 289
L G++L +++G ++ + V NAL+ FYS
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQ-ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTE 356
Query: 290 ------ACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPS 343
+ G + A + F + +N I++N+L++ N AL+LFT M G +
Sbjct: 357 MITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELT 416
Query: 344 VRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVF 403
SL +++C E + +QIH +K G Q+AL+DM +C + + +F
Sbjct: 417 DFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPC-IQTALLDMCTRCERMADAEEMF 475
Query: 404 ESLTKR--TLECCNSLMTSLSHCGATQDVVELFGLMI-DEGLMPDEVTFSTTLKALSVSA 460
+ + + S++ + G V LF + ++ L DEV+ + L +V
Sbjct: 476 DQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLIL---AVCG 532
Query: 461 SATFTS-SQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTS 519
+ F +HC+ALK+G D ++ SL+ Y++C + +++IF T+ + I + S
Sbjct: 533 TLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNS 592
Query: 520 MINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHT--GMVKEGRILFDSMKS 577
+I+ Y G + LA+ M EK +KPD IT ++ +T + R LF SMK+
Sbjct: 593 LISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKT 652
Query: 578 VHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGT 637
++ ++P H++ V +L G P + + + +LL SCR H N V
Sbjct: 653 IYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAK 712
Query: 638 RAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIRE 675
R A++++ P+ P+ ++ SN Y+ G + S IRE
Sbjct: 713 RVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIRE 750
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 200/432 (46%), Gaps = 48/432 (11%)
Query: 178 VGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG 237
+G L+ YL +G A +F L + + L+ GF L E+L + RM G
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 238 -VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFY-----SAC 291
V+PN TF +L C R + G ++ I+K GF+ S +FV+N+L+ Y S+C
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNS-VFVSNSLMSLYDKDSGSSC 234
Query: 292 GCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVM-QLWGQSPSVRSLVGL 350
++ K F+ IP +V SWN++VS A +LF M ++ G +L L
Sbjct: 235 DDVL---KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTL 291
Query: 351 LNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD--------------- 395
L+SC+ + + G+++H A+++G + + +ALI Y K D
Sbjct: 292 LSSCTDSSVLLRGRELHGRAIRIGLMQ-ELSVNNALIGFYSKFWDMKKVESLYEMMMAQD 350
Query: 396 ----------------IESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMID 439
++S+V +F ++T++ N+LM G ++LF M+
Sbjct: 351 AVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQ 410
Query: 440 EGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHV 499
G+ + + ++ + A + + S+ +H F +K G + + +L+D +RC +
Sbjct: 411 RGVELTDFSLTSAVDACGLVSEKKV--SEQIHGFCIKFGTAFNPCIQTALLDMCTRCERM 468
Query: 500 ELSLQIFETLSS--PNAICFTSMINGYARNGMGKQGLAVLH-AMVEKGLKPDEITFLCAL 556
+ ++F+ S ++ TS+I GYARNG+ + +++ H + E+ L DE++ L
Sbjct: 469 ADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLIL 528
Query: 557 TGCNHTGMVKEG 568
C G + G
Sbjct: 529 AVCGTLGFREMG 540
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 170/374 (45%), Gaps = 53/374 (14%)
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
F YLL++ + + + K + + LK+ E + NAL+ Y G A F ++
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLR--EEKTRLGNALISTYLKLGFPREAILVFVSL 140
Query: 305 PVENVISWNSLVSVNADNDLLCDALELFTVMQLWG-QSPSVRSLVGLLNSCSRAEEIGLG 363
V+S+ +L+S + +L +AL++F M+ G P+ + V +L +C R LG
Sbjct: 141 SSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGK-----CSDIESSVAVFESLTKRTLECCNSLM 418
QIH +K GF SV ++L+ +Y K C D+ + +F+ + +R + N+++
Sbjct: 201 IQIHGLIVKSGF-LNSVFVSNSLMSLYDKDSGSSCDDV---LKLFDEIPQRDVASWNTVV 256
Query: 419 TSLSHCGATQDVVELFGLMID-EGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS 477
+SL G + +LF M EG D T ST L S + S+ + LH A++
Sbjct: 257 SSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLS--SCTDSSVLLRGRELHGRAIRI 314
Query: 478 GV-------------------------------EGDAAVACSLMDAYSRCGHVELSLQIF 506
G+ DA ++ AY G V+ +++IF
Sbjct: 315 GLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIF 374
Query: 507 ETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVK 566
++ N I + +++ G+ RNG G + L + M+++G++ + + A+ C G+V
Sbjct: 375 ANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVS 431
Query: 567 EGRILFDSMKSVHG 580
E ++ + +HG
Sbjct: 432 EKKV----SEQIHG 441
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 138/539 (25%), Positives = 257/539 (47%), Gaps = 22/539 (4%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
Q+H ++++ ++ + L+ +A +F+++ E N+ + N L+R +
Sbjct: 37 QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNS 96
Query: 222 CVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVA 281
++ +S M G+ + T+ +LLK CS L K + + I K+G + S+I+V
Sbjct: 97 QPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG-LSSDIYVP 155
Query: 282 NALVDFYSACGCL--VGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
NAL+D YS CG L A K FE + + +SWNS++ L A EL +L+
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGG------LVKAGELRDARRLFD 209
Query: 340 QSPSVRSLVG---LLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
+ P R L+ +L+ +R E+ L E + + S ++ Y K D+
Sbjct: 210 EMPQ-RDLISWNTMLDGYARCREMS-----KAFELFEKMPERNTVSWSTMVMGYSKAGDM 263
Query: 397 ESSVAVFES--LTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
E + +F+ L + + ++ + G ++ L M+ GL D + L
Sbjct: 264 EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 455 ALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNA 514
A + S + +H +S + +A V +L+D Y++CG+++ + +F + +
Sbjct: 324 A--CTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDL 381
Query: 515 ICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDS 574
+ + +M++G +G GK+ + + M +G++PD++TF+ L CNH G++ EG F S
Sbjct: 382 VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYS 441
Query: 575 MKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEE 634
M+ V+ + P H+ C+VDLL R G P + + +W +LL +CR H +
Sbjct: 442 MEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVD 501
Query: 635 VGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
+ LV+LDP DP + SN YA +++ +IR + + + G SS+E+
Sbjct: 502 IAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 143/324 (44%), Gaps = 45/324 (13%)
Query: 38 LSYRSGTKLWPLMQQRH----QSLSFSFIRAQTTTTPRN-----PSDCVYTKNREIDAFI 88
L R KL+ M +R S+ ++A R P + + N +D +
Sbjct: 168 LGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYA 227
Query: 89 KSRDLNSALAVFHTMPLRDTVTYNLLISAWC----------------FPPEQALHL---- 128
+ R+++ A +F MP R+TV+++ ++ + P + +
Sbjct: 228 RCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287
Query: 129 --YGEMGLL-------------GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFL 173
Y E GLL G++ + S+LA C SG G+++H + +
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 174 SNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM 233
SN +V L+ Y G + A ++F+++P+++L WN +L G G +E++ +SRM
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Query: 234 CFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGC 293
+G+ P+ VTF +L C++ ++EG + K+ + + LVD G
Sbjct: 408 RREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGR 467
Query: 294 LVGAKKSFEAIPVE-NVISWNSLV 316
L A K + +P+E NV+ W +L+
Sbjct: 468 LKEAIKVVQTMPMEPNVVIWGALL 491
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 2/164 (1%)
Query: 462 ATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMI 521
A + LH ++ + D +A L+ A S C L++++F + PN S+I
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLI 89
Query: 522 NGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
+A+N Q V M GL D T+ L C+ + +++ + ++ + G+
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKL-GL 148
Query: 582 QPDQRHFSCMVDLLCR-AGXXXXXXXXXXQTPDKRDCFMWSSLL 624
D + ++D R G + +RD W+S+L
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSML 192
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 147/539 (27%), Positives = 269/539 (49%), Gaps = 20/539 (3%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
++H +VK G + F L+ F + +R A +F+ + NL ++N ++RG+
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLAFSSVLDIR-YASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 222 CVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF-- 279
E + + ++++ G+ + +F LK CS ++ G+ L L+ GF+ +F
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFM---VFTD 161
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLVSVNADNDLLCDALELFTVMQLW 338
+ NAL+ FY CG + A+K F+ +P + +++++L++ AL+LF +M+
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS 221
Query: 339 GQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIES 398
+V +L+ L++ S ++ + H +K+G D +H +ALI MYGK I S
Sbjct: 222 EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL-DLHLITALIGMYGKTGGISS 280
Query: 399 SVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSV 458
+ +F+ ++ + N ++ + G ++ V L M E + P+ TF L + +
Sbjct: 281 ARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAY 340
Query: 459 SASATF--TSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAIC 516
S +A T + LL + + DA + +L+D Y++ G +E +++IF + +
Sbjct: 341 SEAAFVGRTVADLLE----EERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKS 396
Query: 517 FTSMINGYARNGMGKQGLAVLHAMVEKG--LKPDEITFLCALTGCNHTGMVKEGRILFDS 574
+T+MI+GY +G+ ++ + + + M E+ ++P+EITFL L C+H G+V EG F
Sbjct: 397 WTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKR 456
Query: 575 MKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEE 634
M + P H+ C+VDLL RAG P D W +LL +CR + N +
Sbjct: 457 MVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNAD 516
Query: 635 VGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
+G L E+ PA + + +A GN + S + E+ RK E G+S+IEI
Sbjct: 517 LGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLD-NELNKGRK---EAGYSAIEI 571
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 226/511 (44%), Gaps = 22/511 (4%)
Query: 45 KLWPLMQQRHQSLSFSFIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMP 104
KL ++ ++ S I T + D +K + AF D+ A ++F +
Sbjct: 30 KLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSK---LLAFSSVLDIRYASSIFEHVS 86
Query: 105 LRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQ 162
+ +N +I + PE+A ++ ++ G+ +F + L C+R G
Sbjct: 87 NTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEG 146
Query: 163 VHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAV-WNVLLRGFCELG 221
+H ++ GF+ + L+ FY G AR++FDE+P+ AV ++ L+ G+ ++
Sbjct: 147 LHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVS 206
Query: 222 CVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVA 281
+L+ + M V N T L S+ L+ + +K+G ++ ++ +
Sbjct: 207 KKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIG-LDLDLHLI 265
Query: 282 NALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQS 341
AL+ Y G + A++ F+ ++V++WN ++ A LL + + L M+
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK 325
Query: 342 PSVRSLVGLLNSCSRAEEIGLGKQIH--CHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
P+ + VGLL+SC+ +E +G+ + ++ D +AL+DMY K +E +
Sbjct: 326 PNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALD---AILGTALVDMYAKVGLLEKA 382
Query: 400 VAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG--LMPDEVTFSTTLKALS 457
V +F + + ++ ++++ G ++ V LF M +E + P+E+TF L A S
Sbjct: 383 VEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
Query: 458 ---VSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPN 513
+ +++ ++ VE V +D R G +E + ++ L + +
Sbjct: 443 HGGLVMEGIRCFKRMVEAYSFTPKVEHYGCV----VDLLGRAGQLEEAYELIRNLPITSD 498
Query: 514 AICFTSMINGYARNGMGKQGLAVLHAMVEKG 544
+ + +++ G G +V+ + E G
Sbjct: 499 STAWRALLAACRVYGNADLGESVMMRLAEMG 529
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 255/530 (48%), Gaps = 46/530 (8%)
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
L +L ++N +L+ + + L + + G+ P+ T +LK R++ EG
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
+K+ +K G +E + +V+N+L+ Y++ G + K F+ +P +V+SWN L+S
Sbjct: 66 EKVHGYAVKAG-LEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 322 NDLLCDALELFTVMQLWGQSPSVR----SLVGLLNSCSRAEEIGLGKQIHCHALKLGFDE 377
N DA+ +F M Q +++ ++V L++CS + + +G++I+ + E
Sbjct: 125 NGRFEDAIGVFKRMS---QESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEF--E 179
Query: 378 GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG------------ 425
SV +AL+DM+ KC ++ + AVF+S+ + ++C S++ G
Sbjct: 180 MSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERS 239
Query: 426 ATQDVV-------------------ELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTS 466
+DVV ELF M G+ PD + L + +
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTG--CAQTGALEQ 297
Query: 467 SQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYAR 526
+ +H + ++ V D V +L+D Y++CG +E +L++F + + +TS+I G A
Sbjct: 298 GKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAM 357
Query: 527 NGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQR 586
NGM + L + + M G++ D ITF+ LT CNH G V EGR +F SM H VQP
Sbjct: 358 NGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSE 417
Query: 587 HFSCMVDLLCRAGXXXXXXXXXXQTPDKRD---CFMWSSLLRSCRSHKNEEVGTRAAQVL 643
H SC++DLLCRAG + + D ++ SLL + R++ N ++ R A+ L
Sbjct: 418 HCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKL 477
Query: 644 VELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
+++ D + ++ YA ++ +R + + G SSIEI
Sbjct: 478 EKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEI 527
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 193/422 (45%), Gaps = 44/422 (10%)
Query: 124 QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV 183
+ L L+GE+ G+ + T VL R EG +VH VK G + +V +L+
Sbjct: 29 KVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLM 88
Query: 184 GFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFD-GVEPNG 242
G Y ++G E+ ++FDE+P+R++ WN L+ + G E+++ + RM + ++ +
Sbjct: 89 GMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDE 148
Query: 243 VTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFE 302
T L CS + L G+++ ++ E ++ + NALVD + CGCL A+ F+
Sbjct: 149 GTIVSTLSACSALKNLEIGERIYRFVVTE--FEMSVRIGNALVDMFCKCGCLDKARAVFD 206
Query: 303 AI-------------------------------PVENVISWNSLVSVNADNDLLCDALEL 331
++ PV++V+ W ++++ + +ALEL
Sbjct: 207 SMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALEL 266
Query: 332 FTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ----SALI 387
F MQ G P LV LL C++ + GK IH + +E V +AL+
Sbjct: 267 FRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY-----INENRVTVDKVVGTALV 321
Query: 388 DMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEV 447
DMY KC IE+++ VF + +R SL+ L+ G + ++L+ M + G+ D +
Sbjct: 322 DMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAI 381
Query: 448 TFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFE 507
TF L A + ++ H + V+ + L+D R G ++ + ++ +
Sbjct: 382 TFVAVLTACN-HGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Query: 508 TL 509
+
Sbjct: 441 KM 442
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 129/302 (42%), Gaps = 36/302 (11%)
Query: 99 VFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGL-LGIRETSTTFSSVLAVCARSG 155
VF MP RD V++N LIS++ E A+ ++ M ++ T S L+ C+
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 156 FHREGVQVHCRVVKFGFLSNVFVGGTLVGF------------------------------ 185
G +++ R V F +V +G LV
Sbjct: 163 NLEIGERIY-RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVF 221
Query: 186 -YLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
Y++ G + AR LF+ P +++ +W ++ G+ + +E+L + M G+ P+
Sbjct: 222 GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
LL C+ L +GK + I V + V ALVD Y+ CGC+ A + F I
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYI-NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEI 340
Query: 305 PVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGK 364
+ SW SL+ A N + AL+L+ M+ G + V +L +C+ + G+
Sbjct: 341 KERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGR 400
Query: 365 QI 366
+I
Sbjct: 401 KI 402
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 2/225 (0%)
Query: 86 AFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC-FPP-EQALHLYGEMGLLGIRETSTT 143
++ + ++ A +F P++D V + +++ + F ++AL L+ M GIR +
Sbjct: 222 GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
S+L CA++G +G +H + + + VG LV Y G E A E+F E+
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKK 263
ER+ A W L+ G G +L+ Y M GV + +TF +L C++ + EG+K
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 264 LQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVEN 308
+ + + V+ + L+D G L A++ + + E+
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGES 446
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 247/519 (47%), Gaps = 13/519 (2%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFY-LNVGLREVARELFDELPERNLAVWNVLLRGFCEL 220
++H V K + + L FY LN L AR+LFD PER++ +WN ++R + +
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLIS-ARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF- 279
L+ +S++ P+ T+ L + S + K L+ CI + V F
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESF---DTKGLR-CIHGIAIVSGLGFD 140
Query: 280 --VANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQL 337
+A+V YS G +V A K F +IP ++ WN ++ + LF +MQ
Sbjct: 141 QICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH 200
Query: 338 WGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIE 397
G P+ ++V L + + + +H LK+ D S + AL++MY +C I
Sbjct: 201 RGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS-YVGCALVNMYSRCMCIA 259
Query: 398 SSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALS 457
S+ +VF S+++ L C+SL+T S CG ++ + LF + G PD V + L S
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLG--S 317
Query: 458 VSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICF 517
+ + S + +H + ++ G+E D V +L+D YS+CG ++ ++ +F + N + F
Sbjct: 318 CAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 518 TSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKS 577
S+I G +G ++E GL PDEITF L C H+G++ +G+ +F+ MKS
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKS 437
Query: 578 VHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGT 637
G++P H+ MV L+ AG D + +LL C H+N +
Sbjct: 438 EFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAE 497
Query: 638 RAAQVLVELDPDDPAVW-LQASNFYAEIGNFDASREIRE 675
A+ + + + +V+ + SN YA G +D +R+
Sbjct: 498 VVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRD 536
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLLGIRETSTTFSSVLAV 150
+ SA +VF+++ D V + LI+ + C ++ALHL+ E+ + G + + VL
Sbjct: 258 IASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGS 317
Query: 151 CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVW 210
CA G +VH V++ G ++ V L+ Y GL + A LF +PE+N+ +
Sbjct: 318 CAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKL 264
N L+ G G + ++ + G+ P+ +TF LL C + LN+G+++
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 214/423 (50%), Gaps = 4/423 (0%)
Query: 244 TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
T+ L++ C + + K++ ++ GF E ++ N ++ + CG ++ A++ F+
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGF-EPEQYMMNRILLMHVKCGMIIDARRLFDE 183
Query: 304 IPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLG 363
IP N+ S+ S++S + +A ELF +M + +L + + I +G
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH 423
KQ+H ALKLG + + LIDMY KC DIE + FE + ++T N+++ +
Sbjct: 244 KQLHVCALKLGVVDNTF-VSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 424 CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDA 483
G +++ + L M D G+ D+ T S ++ + A T H +++G E +
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQA--HASLIRNGFESEI 360
Query: 484 AVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEK 543
+L+D YS+ G V+ + +F+ L N I + +++ GYA +G G + + M+
Sbjct: 361 VANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAA 420
Query: 544 GLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXX 603
+ P+ +TFL L+ C ++G+ ++G +F SM VHG++P H++CM++LL R G
Sbjct: 421 NVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDE 480
Query: 604 XXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAE 663
+ P K MW++LL +CR +N E+G A+ L + P+ ++ N Y
Sbjct: 481 AIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNS 540
Query: 664 IGN 666
+G
Sbjct: 541 MGK 543
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 204/444 (45%), Gaps = 40/444 (9%)
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
+T+ +++ C R R +V+ ++ GF ++ ++ ++ G+ AR LFDE
Sbjct: 124 STYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDE 183
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+PERNL + ++ GF G E+ + M + + TF +L+ + + G
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
K+L C LK+G V+ N FV+ L+D YS CG + A+ +FE +P + ++WN++++ A
Sbjct: 244 KQLHVCALKLGVVD-NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
+ +AL L M+ G S +L ++ ++ ++ L KQ H ++ GF E +
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF-ESEIV 361
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
A +AL+D Y K ++++ VF+ L ++ + N+LM ++ G D V+LF MI
Sbjct: 362 ANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAAN 421
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVEL 501
+ P+ VTF L A + S S Q F S V G
Sbjct: 422 VAPNHVTFLAVLSACAYSG----LSEQGWEIFLSMSEVHG-------------------- 457
Query: 502 SLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNH 561
P A+ + MI R+G+ + +A + LK + L C
Sbjct: 458 --------IKPRAMHYACMIELLGRDGLLDEAIAFIR---RAPLKTTVNMWAALLNACRM 506
Query: 562 TGMVKEGRILFDSMKSVHGVQPDQ 585
++ GR++ + + +G+ P++
Sbjct: 507 QENLELGRVVAEKL---YGMGPEK 527
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 6/290 (2%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLL 135
Y NR + +K + A +F +P R+ +Y +IS + +A L+ M
Sbjct: 159 YMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEE 218
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
+ TF+ +L A G G Q+H +K G + N FV L+ Y G E A
Sbjct: 219 LSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDA 278
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
R F+ +PE+ WN ++ G+ G EE+L M GV + T ++++ +
Sbjct: 279 RCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKL 338
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSL 315
+L K+ + +++ GF ES I ALVDFYS G + A+ F+ +P +N+ISWN+L
Sbjct: 339 AKLELTKQAHASLIRNGF-ESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNAL 397
Query: 316 VSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ 365
+ A++ DA++LF M +P+ + + +L++C+ + GL +Q
Sbjct: 398 MGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYS---GLSEQ 444
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 198/369 (53%), Gaps = 4/369 (1%)
Query: 327 DALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSAL 386
+AL + M G P + LL +C+R + I GKQIH KLG E V Q++L
Sbjct: 115 EALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGL-EADVFVQNSL 173
Query: 387 IDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF-GLMIDEGLMPD 445
I+MYG+C ++E S AVFE L +T +S++++ + G + + LF G+ + L +
Sbjct: 174 INMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAE 233
Query: 446 EVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQI 505
E + L A + + + S +H F L++ E + V SL+D Y +CG ++ +L I
Sbjct: 234 ESGMVSALLACANTGALNLGMS--IHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHI 291
Query: 506 FETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMV 565
F+ + N + +++MI+G A +G G+ L + M+++GL+PD + ++ L C+H+G+V
Sbjct: 292 FQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLV 351
Query: 566 KEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLR 625
KEGR +F M V+P H+ C+VDLL RAG P +++ +W + L
Sbjct: 352 KEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Query: 626 SCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTRE 685
CR +N E+G AAQ L++L +P +L SN Y++ +D R + + +
Sbjct: 412 QCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQT 471
Query: 686 IGHSSIEIR 694
G S +E++
Sbjct: 472 PGFSIVELK 480
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 162/345 (46%), Gaps = 14/345 (4%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGLLGIRETSTTFSSVLAV 150
+N A ++F + T +N +I + E+AL Y EM G + T+ +L
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 151 CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVW 210
C R REG Q+H +V K G ++VFV +L+ Y G E++ +F++L + A W
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFD---GVEPNGVTFCYLLKVCSNHRRLNEGKKLQSC 267
+ ++ +G E L + MC + E +G+ L C+N LN G +
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALL--ACANTGALNLGMSIHGF 259
Query: 268 ILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCD 327
+L+ E NI V +LVD Y CGCL A F+ + N +++++++S A +
Sbjct: 260 LLR-NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 328 ALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALI 387
AL +F+ M G P V +LN+CS + + G+++ LK G E + L+
Sbjct: 319 ALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLV 378
Query: 388 DMYGKCSDIESSVAVFESLTKRTLECCNSLM--TSLSHCGATQDV 430
D+ G+ +E ++ +S+ N ++ T LS C Q++
Sbjct: 379 DLLGRAGLLEEALETIQSIPIEK----NDVIWRTFLSQCRVRQNI 419
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 120/248 (48%), Gaps = 10/248 (4%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISA------WCFPPEQALHLYG 130
V+ +N I+ + + ++ + AVF + + +++ ++SA W E L G
Sbjct: 167 VFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMW---SECLLLFRG 223
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
++ + S L CA +G G+ +H +++ N+ V +LV Y+ G
Sbjct: 224 MCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCG 283
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
+ A +F ++ +RN ++ ++ G G E +L +S+M +G+EP+ V + +L
Sbjct: 284 CLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLN 343
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NV 309
CS+ + EG+++ + +LK G VE LVD G L A ++ ++IP+E N
Sbjct: 344 ACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKND 403
Query: 310 ISWNSLVS 317
+ W + +S
Sbjct: 404 VIWRTFLS 411
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/555 (26%), Positives = 257/555 (46%), Gaps = 53/555 (9%)
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
F S++ C + R VH ++++ G LS+ V LV + + + +F
Sbjct: 32 FISLIHACKDTASLR---HVHAQILRRGVLSSR-VAAQLVSCSSLLKSPDYSLSIFRNSE 87
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKK 263
ERN V N L+RG E E S+ ++ M GV+P+ +TF ++LK S G+
Sbjct: 88 ERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRA 147
Query: 264 LQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP----VENVISWNSLVSVN 319
L + LK FV+ + FV +LVD Y+ G L A + FE P E+++ WN L++
Sbjct: 148 LHAATLK-NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLING- 205
Query: 320 ADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGS 379
C A ++ L+ P E +
Sbjct: 206 -----YCRAKDMHMATTLFRSMP----------------------------------ERN 226
Query: 380 VHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMID 439
+ S LI Y ++ + +FE + ++ + +L+ S G + + + M++
Sbjct: 227 SGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLE 286
Query: 440 EGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHV 499
+GL P+E T + L A S S S +H + L +G++ D A+ +L+D Y++CG +
Sbjct: 287 KGLKPNEYTIAAVLSA--CSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGEL 344
Query: 500 ELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGC 559
+ + +F ++ + + +T+MI G+A +G Q + M+ G KPDE+ FL LT C
Sbjct: 345 DCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
Query: 560 NHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFM 619
++ V G FDSM+ + ++P +H+ +VDLL RAG P D
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTT 464
Query: 620 WSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALA 679
W++L R+C++HK +Q L+ELDP+ ++ +A GN E R ++L
Sbjct: 465 WAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQ-DVEKRRLSLQ 523
Query: 680 RKMT-REIGHSSIEI 693
+++ R +G S IE+
Sbjct: 524 KRIKERSLGWSYIEL 538
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 165/376 (43%), Gaps = 49/376 (13%)
Query: 86 AFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTT 143
+ +KS D +L++F R+ N LI E ++ + M LG++ T
Sbjct: 71 SLLKSPDY--SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLT 128
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
F VL ++ GF G +H +K + FV +LV Y G + A ++F+E P
Sbjct: 129 FPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESP 188
Query: 204 ER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLN 259
+R ++ +WNVL+ G+C + + + M E N ++ L+K
Sbjct: 189 DRIKKESILIWNVLINGYCRAKDMHMATTLFRSM----PERNSGSWSTLIK--------- 235
Query: 260 EGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVN 319
G+V+S G L AK+ FE +P +NV+SW +L++
Sbjct: 236 ------------GYVDS---------------GELNRAKQLFELMPEKNVVSWTTLINGF 268
Query: 320 ADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGS 379
+ A+ + M G P+ ++ +L++CS++ +G G +IH + L G
Sbjct: 269 SQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDR 328
Query: 380 VHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMID 439
+AL+DMY KC +++ + VF ++ + + +++ + G ++ F M+
Sbjct: 329 A-IGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMY 387
Query: 440 EGLMPDEVTFSTTLKA 455
G PDEV F L A
Sbjct: 388 SGEKPDEVVFLAVLTA 403
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 112/235 (47%), Gaps = 3/235 (1%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETS 141
I ++ S +LN A +F MP ++ V++ LI+ + E A+ Y EM G++
Sbjct: 234 IKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNE 293
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
T ++VL+ C++SG G+++H ++ G + +G LV Y G + A +F
Sbjct: 294 YTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSN 353
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+ +++ W +++G+ G +++ + +M + G +P+ V F +L C N ++ G
Sbjct: 354 MNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG 413
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSL 315
+ +E + +VD G L A + E +P+ ++ +W +L
Sbjct: 414 LNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 157/540 (29%), Positives = 265/540 (49%), Gaps = 32/540 (5%)
Query: 166 RVVKFGFLSNVFVGGTLVGFYLNVGLREV--------ARELFDELPERNLAVWNVLLRGF 217
R+ +F L NV V T N+ LR V A LFDELP+R+L+ N L
Sbjct: 6 RIGRFIRLGNVTVKST------NLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSH 59
Query: 218 CELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESN 277
G ++L + ++ + + TF +L CS G+++ + ++K G E+
Sbjct: 60 LRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQG-AETG 118
Query: 278 IFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQL 337
AL+D YS G LV + + FE++ ++++SWN+L+S N +AL +F M
Sbjct: 119 TISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYR 178
Query: 338 WGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIE 397
S +L ++ +C+ + + GKQ+H + G D V +A+I Y I
Sbjct: 179 ERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRD--LVVLGTAMISFYSSVGLIN 236
Query: 398 SSVAVFESLTKRTLEC-CNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKAL 456
++ V+ SL T E NSL +S C ++ E F LM + P+ S++L
Sbjct: 237 EAMKVYNSLNVHTDEVMLNSL---ISGCIRNRNYKEAFLLMSRQ--RPNVRVLSSSLAGC 291
Query: 457 SVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAIC 516
S S + Q+ HC AL++G D+ + LMD Y +CG + + IF + S + +
Sbjct: 292 S-DNSDLWIGKQI-HCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVS 349
Query: 517 FTSMINGYARNGMGKQGLAVLHAMVEK--GLKPDEITFLCALTGCNHTGMVKEGRILFDS 574
+TSMI+ YA NG G + L + M E+ G+ P+ +TFL ++ C H G+VKEG+ F
Sbjct: 350 WTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGM 409
Query: 575 MKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRD----CFMWSSLLRSCRSH 630
MK + + P H+ C +D+L +AG + + + C +W ++L +C +
Sbjct: 410 MKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLN 469
Query: 631 KNEEVGTRAAQVLV-ELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHS 689
+ G A+ L+ E P++ ++++ SNFYA +G +D E+R + + + GHS
Sbjct: 470 MDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 189/395 (47%), Gaps = 20/395 (5%)
Query: 122 PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGT 181
P L L+ ++ +S TF+ VL C+ + G QVH ++K G +
Sbjct: 65 PNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTA 124
Query: 182 LVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPN 241
L+ Y G + +F+ + E++L WN LL GF G +E+L ++ M + VE +
Sbjct: 125 LIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEIS 184
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
T ++K C++ + L +GK++ + ++ G + + A++ FYS+ G + A K +
Sbjct: 185 EFTLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVY 242
Query: 302 EAIPVE-NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
++ V + + NSL+S N + E F +M Q P+VR L L CS ++
Sbjct: 243 NSLNVHTDEVMLNSLISGCIRNR---NYKEAFLLMSR--QRPNVRVLSSSLAGCSDNSDL 297
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
+GKQIHC AL+ GF S + L+DMYGKC I + +F ++ +++ S++ +
Sbjct: 298 WIGKQIHCVALRNGFVSDS-KLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDA 356
Query: 421 LSHCGATQDVVELFGLMIDE--GLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSG 478
+ G +E+F M +E G++P+ VTF L +S A A + CF +
Sbjct: 357 YAVNGDGVKALEIFREMCEEGSGVLPNSVTF---LVVISACAHAGLV-KEGKECFGMMKE 412
Query: 479 ----VEGDAAVACSLMDAYSRCGHVELSLQIFETL 509
V G C +D S+ G E ++ E +
Sbjct: 413 KYRLVPGTEHYVC-FIDILSKAGETEEIWRLVERM 446
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 228/454 (50%), Gaps = 6/454 (1%)
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
+ LL C + + L+ G K+ S IL + N + + L+ +S C L A+K F+ +
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDV 193
Query: 305 PVENVIS---WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
++++ W ++ + N DAL ++ M P S+ L +C +++
Sbjct: 194 TDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLR 253
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSL 421
+G+ IH +K V + L+ +Y + + + VF+ +++R + NSL++ L
Sbjct: 254 VGRGIHAQIVKRKEKVDQV-VYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVL 312
Query: 422 SHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEG 481
S ++ LF M +E + T +T L A S A + + +H LKS +
Sbjct: 313 SKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPA--CSRVAALLTGKEIHAQILKSKEKP 370
Query: 482 DAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMV 541
D + SLMD Y +CG VE S ++F+ + + + + M+N YA NG ++ + + M+
Sbjct: 371 DVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI 430
Query: 542 EKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXX 601
E G+ PD ITF+ L+GC+ TG+ + G LF+ MK+ V P H++C+VD+L RAG
Sbjct: 431 ESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKI 490
Query: 602 XXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFY 661
P K +W SLL SCR H N VG AA+ L L+P +P ++ SN Y
Sbjct: 491 KEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIY 550
Query: 662 AEIGNFDASREIREVALARKMTREIGHSSIEIRQ 695
A+ +D +IRE+ R + +E G S ++++
Sbjct: 551 ADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKD 584
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 168/337 (49%), Gaps = 13/337 (3%)
Query: 193 EVARELFDELPERNL---AVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLL 249
++AR++FD++ + +L VW + G+ G ++L Y M +EP + L
Sbjct: 184 DLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVAL 243
Query: 250 KVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV 309
K C + + L G+ + + I+K + V N L+ Y G A+K F+ + NV
Sbjct: 244 KACVDLKDLRVGRGIHAQIVKRKEKVDQV-VYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCH 369
++WNSL+SV + + + LF MQ S +L +L +CSR + GK+IH
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQ 362
Query: 370 ALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQD 429
LK ++ V ++L+DMYGKC ++E S VF+ + + L N ++ + G ++
Sbjct: 363 ILK-SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEE 421
Query: 430 VVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSS---QLLHCFALKSGVEGDAAVA 486
V+ LF MI+ G+ PD +TF L S + + S ++ F + +E A
Sbjct: 422 VINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALE---HYA 478
Query: 487 CSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMIN 522
C L+D R G ++ ++++ ET+ P+A + S++N
Sbjct: 479 C-LVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 143/301 (47%), Gaps = 4/301 (1%)
Query: 122 PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGT 181
P AL +Y +M I + + S L C R G +H ++VK + V
Sbjct: 217 PRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNV 276
Query: 182 LVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPN 241
L+ Y+ GL + AR++FD + ERN+ WN L+ + V E N + +M + + +
Sbjct: 277 LLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFS 336
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
T +L CS L GK++ + ILK + ++ + N+L+D Y CG + +++ F
Sbjct: 337 WATLTTILPACSRVAALLTGKEIHAQILKSK-EKPDVPLLNSLMDMYGKCGEVEYSRRVF 395
Query: 302 EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
+ + +++ SWN +++ A N + + + LF M G +P + V LL+ CS
Sbjct: 396 DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTE 455
Query: 362 LGKQIHCHALKLGFD-EGSVHAQSALIDMYGKCSDIESSVAVFESLT-KRTLECCNSLMT 419
G + +K F ++ + L+D+ G+ I+ +V V E++ K + SL+
Sbjct: 456 YGLSLF-ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
Query: 420 S 420
S
Sbjct: 515 S 515
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 5/259 (1%)
Query: 62 IRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC-- 119
I AQ VY N + +++S + A VF M R+ VT+N LIS
Sbjct: 258 IHAQIVKRKEKVDQVVY--NVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKK 315
Query: 120 FPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVG 179
+ +L+ +M I + T +++L C+R G ++H +++K +V +
Sbjct: 316 VRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLL 375
Query: 180 GTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE 239
+L+ Y G E +R +FD + ++LA WN++L + G +EE +N + M GV
Sbjct: 376 NSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVA 435
Query: 240 PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKK 299
P+G+TF LL CS+ G L + V + LVD G + A K
Sbjct: 436 PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVK 495
Query: 300 SFEAIPVENVIS-WNSLVS 317
E +P + S W SL++
Sbjct: 496 VIETMPFKPSASIWGSLLN 514
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/514 (24%), Positives = 243/514 (47%), Gaps = 33/514 (6%)
Query: 209 VWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCI 268
V+N LR ++ +Y R+ G + +F +LK S L EG +L
Sbjct: 78 VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVA 137
Query: 269 LKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDA 328
K+ + + FV +D Y++CG + A+ F+ + +V++WN+++ L+ +A
Sbjct: 138 FKIATL-CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 329 LELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH-----------CHAL------ 371
+LF M+ P L ++++C R + + I+ H L
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 372 ----------KLGFDEGSVH---AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLM 418
+ F + SV +A++ Y KC ++ + +F+ K+ L C +++
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 419 TSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSG 478
++ Q+ + +F M G+ PD V+ + + A + ++ +H +G
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISA--CANLGILDKAKWVHSCIHVNG 374
Query: 479 VEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLH 538
+E + ++ +L++ Y++CG ++ + +FE + N + ++SMIN + +G L++
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 539 AMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRA 598
M ++ ++P+E+TF+ L GC+H+G+V+EG+ +F SM + + P H+ CMVDL RA
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 599 GXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQAS 658
P + +W SL+ +CR H E+G AA+ ++EL+PD + S
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMS 554
Query: 659 NFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
N YA ++ R IR V + + +E G S I+
Sbjct: 555 NIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRID 588
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 214/487 (43%), Gaps = 38/487 (7%)
Query: 96 ALAVFHTMP-LRDTVTYNLLIS--AWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCA 152
AL VF ++P +++ +N + + P + Y + +G R +F +L +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 153 RSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNV 212
+ EG+++H K L + FV + Y + G AR +FDE+ R++ WN
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 213 LLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILK-- 270
++ +C G V+E+ + M V P+ + C ++ C + + + +++
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 271 --------------------MGFVES--------NIFVANALVDFYSACGCLVGAKKSFE 302
M N+FV+ A+V YS CG L A+ F+
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 303 AIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
++++ W +++S ++D +AL +F M G P V S+ ++++C+ +
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLS 422
K +H + + E + +ALI+MY KC ++++ VFE + +R + +S++ +LS
Sbjct: 363 AKWVHS-CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALS 421
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGD 482
G D + LF M E + P+EVTF L S S ++ + +
Sbjct: 422 MHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE-EGKKIFASMTDEYNITPK 480
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGLAVLHAMV 541
++D + R + +L++ E++ + N + + S+++ +G + G ++
Sbjct: 481 LEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRIL 540
Query: 542 EKGLKPD 548
E L+PD
Sbjct: 541 E--LEPD 545
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETS 141
+ + K L+ A +F +D V + +ISA+ P++AL ++ EM GI+
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
+ SV++ CA G + VH + G S + + L+ Y G + R++F++
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+P RN+ W+ ++ G ++L+ ++RM + VEPN VTF +L CS+ + EG
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV-ENVISWNSLVS 317
KK+ + + + + +VD + L A + E++PV NV+ W SL+S
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS 521
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/568 (23%), Positives = 258/568 (45%), Gaps = 73/568 (12%)
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
AR++FD +PE + WN +L + LG +E++ ++++ F +P+ +F +L C++
Sbjct: 23 ARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCAS 82
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKK--------------- 299
+ G+K+QS +++ GF S + V N+L+D Y C + A K
Sbjct: 83 LGNVKFGRKIQSLVIRSGFCAS-LPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTW 141
Query: 300 -----------SFEA-------IPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQS 341
FEA +P +WN ++S +A L L LF M
Sbjct: 142 CSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFK 201
Query: 342 PSVRSLVGLLNSCS-RAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSV 400
P + L+N+CS + + G+ +H LK G+ +V A+++++ Y K + ++
Sbjct: 202 PDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSS-AVEAKNSVLSFYTKLGSRDDAM 260
Query: 401 AVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGL------------------------ 436
ES+ T NS++ + G T+ +E+F L
Sbjct: 261 RELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQ 320
Query: 437 -------MIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSL 489
M+ G+ D + L A S A +++H + G +G A V +L
Sbjct: 321 ALRFFVEMMKSGVDSDHFAYGAVLHA--CSGLALLGHGKMIHGCLIHCGFQGYAYVGNAL 378
Query: 490 MDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDE 549
++ Y++CG ++ + + F +++ + + + +M+ + +G+ Q L + M+ G+KPD
Sbjct: 379 VNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDN 438
Query: 550 ITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXX 609
+TF+ LT C+H+G+V+EG ++F+SM + + + H +CM+D+ R G
Sbjct: 439 VTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLAT 498
Query: 610 Q----TPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIG 665
D + W +LL +C +H + E+G ++VL +P + ++ SN Y G
Sbjct: 499 TYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTG 558
Query: 666 NFDASREIREVALARKMTREIGHSSIEI 693
+ ++R + R M + G S IE+
Sbjct: 559 RWKEGEDVRREMVERGMKKTPGCSWIEV 586
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 132/572 (23%), Positives = 231/572 (40%), Gaps = 113/572 (19%)
Query: 83 EIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRET 140
+I + KS + SA VF MP DTV +N +++++ ++A+ L+ ++ +
Sbjct: 10 KIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPD 69
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFY-------------- 186
+F+++L+ CA G + G ++ V++ GF +++ V +L+ Y
Sbjct: 70 DYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFR 129
Query: 187 -------------------LNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESL 227
+N E A ++F E+P+R WN+++ G G +E L
Sbjct: 130 DMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCL 189
Query: 228 NYYSRMCFDGVEPNGVTFCYLLKVCS-NHRRLNEGKKLQSCILKMGFVESNIFVANALVD 286
+ + M +P+ TF L+ CS + + G+ + + +LK G+ S + N+++
Sbjct: 190 SLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGW-SSAVEAKNSVLS 248
Query: 287 FYSACGCLVGAKKSFEAIPVENVISWNSLVSV---------------------------- 318
FY+ G A + E+I V +SWNS++
Sbjct: 249 FYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTM 308
Query: 319 ------NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
N D + AL F M G + +L++CS +G GK IH +
Sbjct: 309 ITGYGRNGDGE---QALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 373 LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVE 432
GF +G + +AL+++Y KC DI+ + F + + L N+++ + G ++
Sbjct: 366 CGF-QGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALK 424
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALS----VSASATFTSSQL-----------LHCFALKS 477
L+ MI G+ PD VTF L S V S + + C
Sbjct: 425 LYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMF 484
Query: 478 GVEGDAAVACSLMDAYSR-----------------CG---HVELSLQIFETL--SSPN-A 514
G G A A L YS C H EL ++ + L + P+
Sbjct: 485 GRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEE 544
Query: 515 ICFTSMINGYARNGMGKQGLAVLHAMVEKGLK 546
+ F + N Y G K+G V MVE+G+K
Sbjct: 545 MSFVLLSNLYCSTGRWKEGEDVRREMVERGMK 576
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 10/244 (4%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCF--PPEQALHLYGEMGLLGIR 138
N IDA +K + AL VFH P ++ VT+ +I+ + EQAL + EM G+
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
+ +VL C+ G +H ++ GF +VG LV Y G + A
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRA 394
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
F ++ ++L WN +L F G +++L Y M G++P+ VTF LL CS+ +
Sbjct: 395 FGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLV 454
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSV 318
EG + ++K + + ++D + G L AK + +++SLV+
Sbjct: 455 EEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAK--------DLATTYSSLVTD 506
Query: 319 NADN 322
+++N
Sbjct: 507 SSNN 510
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 48/300 (16%)
Query: 391 GKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFS 450
K I S+ VF+ + + N+++TS S G Q+ + LF + PD+ +F+
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 451 TTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL- 509
L + + F + + ++SG V SL+D Y +C + ++F +
Sbjct: 75 AILSTCASLGNVKF--GRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMC 132
Query: 510 -SSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFL--CALTGCNHTGMVK 566
S N + + S++ Y +Q A L VE P + F ++G H G ++
Sbjct: 133 CDSRNEVTWCSLLFAYMN---AEQFEAALDVFVE---MPKRVAFAWNIMISGHAHCGKLE 186
Query: 567 EGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRS 626
LF M ++ K DC+ +SSL+ +
Sbjct: 187 SCLSLFKEM---------------------------------LESEFKPDCYTFSSLMNA 213
Query: 627 CRSHKNEEVGTRAAQVLVELDPDDPAVWLQAS--NFYAEIGNF-DASREIREVALARKMT 683
C + + V R ++ + AV + S +FY ++G+ DA RE+ + + +++
Sbjct: 214 CSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVS 273
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 240/491 (48%), Gaps = 14/491 (2%)
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILK 270
N L++ C+ G +++++ S+ P+ T+ L+ C + L++ ++ IL
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 271 MGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALE 330
G + + F+A L+ YS G + A+K F+ + WN+L + L
Sbjct: 106 NG-SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 331 LFTVMQLWGQSPSVRSLVGLLNSCSRAE----EIGLGKQIHCHALKLGFDEGSVHAQSAL 386
L+ M G + +L +C +E + GK+IH H + G+ V+ + L
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS-SHVYIMTTL 223
Query: 387 IDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGL--MP 444
+DMY + ++ + VF + R + ++++ + G + + F M+ E P
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 445 DEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQ 504
+ VT + L+A ++ A +L+H + L+ G++ V +L+ Y RCG +E+ +
Sbjct: 284 NSVTMVSVLQA--CASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQR 341
Query: 505 IFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGM 564
+F+ + + + + S+I+ Y +G GK+ + + M+ G P +TF+ L C+H G+
Sbjct: 342 VFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGL 401
Query: 565 VKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
V+EG+ LF++M HG++P H++CMVDLL RA + +W SLL
Sbjct: 402 VEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461
Query: 625 RSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTR 684
SCR H N E+ RA++ L L+P + ++ ++ YAE +D + ++++ R + +
Sbjct: 462 GSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQK 521
Query: 685 EIGHSSIEIRQ 695
G +E+R+
Sbjct: 522 LPGRCWMEVRR 532
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 169/326 (51%), Gaps = 12/326 (3%)
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
+ T+ ++ C + ++VH ++ G + F+ L+G Y ++G + AR++F
Sbjct: 76 SQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVF 135
Query: 200 DELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC------S 253
D+ +R + VWN L R G EE L Y +M GVE + T+ Y+LK C
Sbjct: 136 DKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTV 195
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWN 313
NH L +GK++ + + + G+ S++++ LVD Y+ GC+ A F +PV NV+SW+
Sbjct: 196 NH--LMKGKEIHAHLTRRGY-SSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 252
Query: 314 SLVSVNADNDLLCDALELFTVM--QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
++++ A N +AL F M + SP+ ++V +L +C+ + GK IH + L
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVV 431
+ G D + SAL+ MYG+C +E VF+ + R + NSL++S G + +
Sbjct: 313 RRGLD-SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAI 371
Query: 432 ELFGLMIDEGLMPDEVTFSTTLKALS 457
++F M+ G P VTF + L A S
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACS 397
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 69 TPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QAL 126
T R S VY +D + + ++ A VF MP+R+ V+++ +I+ + + +AL
Sbjct: 209 TRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEAL 268
Query: 127 HLYGEMGLLGIRET------STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGG 180
+ EM +RET S T SVL CA +G +H +++ G S + V
Sbjct: 269 RTFREM----MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVIS 324
Query: 181 TLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEP 240
LV Y G EV + +FD + +R++ WN L+ + G ++++ + M +G P
Sbjct: 325 ALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASP 384
Query: 241 NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKS 300
VTF +L CS+ + EGK+L + + ++ I +VD L A K
Sbjct: 385 TPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKM 444
Query: 301 FEAIPVE-NVISWNSLV 316
+ + E W SL+
Sbjct: 445 VQDMRTEPGPKVWGSLL 461
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 225/439 (51%), Gaps = 8/439 (1%)
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSAC---GCLVGAKKSFEAIPVENVISWNS 314
L E ++Q+ +K +E FVA L++F + + A+ FEA+ +++ +NS
Sbjct: 42 LRELMQIQAYAIK-SHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIVIFNS 99
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
+ + + LF + G P + LL +C+ A+ + G+Q+HC ++KLG
Sbjct: 100 MARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 159
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF 434
D+ +V+ LI+MY +C D++S+ VF+ + + + C N+++T + + + LF
Sbjct: 160 LDD-NVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYS 494
M + L P+E+T + L + ++ S + +H +A K V +L+D ++
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDL--GKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Query: 495 RCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
+CG ++ ++ IFE + + +++MI YA +G ++ + + M + ++PDEITFL
Sbjct: 277 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 336
Query: 555 ALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDK 614
L C+HTG V+EGR F M S G+ P +H+ MVDLL RAG + P
Sbjct: 337 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS 396
Query: 615 RDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIR 674
+W LL +C SH N ++ + ++ + ELD ++ SN YA ++ +R
Sbjct: 397 PTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLR 456
Query: 675 EVALARKMTREIGHSSIEI 693
+V RK + G SSIE+
Sbjct: 457 KVMKDRKAVKVPGCSSIEV 475
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 148/317 (46%), Gaps = 5/317 (1%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGLLGIRETSTTFSSVLAV 150
++ A +F M D V +N + + P + L+ E+ GI + TF S+L
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 151 CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVW 210
CA + EG Q+HC +K G NV+V TL+ Y + AR +FD + E + +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILK 270
N ++ G+ E+L+ + M ++PN +T +L C+ L+ GK + K
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 271 MGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALE 330
F + + V AL+D ++ CG L A FE + ++ +W++++ A++ ++
Sbjct: 259 HSFCKY-VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 331 LFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL-KLGFDEGSVHAQSALIDM 389
+F M+ P + +GLLN+CS + G++ + K G S+ +++D+
Sbjct: 318 MFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGI-VPSIKHYGSMVDL 376
Query: 390 YGKCSDIESSVAVFESL 406
+ ++E + + L
Sbjct: 377 LSRAGNLEDAYEFIDKL 393
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 4/235 (1%)
Query: 75 DCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEM 132
D VY I+ + + D++SA VF + V YN +I+ + P +AL L+ EM
Sbjct: 162 DNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM 221
Query: 133 GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLR 192
++ T SVL+ CA G G +H K F V V L+ + G
Sbjct: 222 QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSL 281
Query: 193 EVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
+ A +F+++ ++ W+ ++ + G E+S+ + RM + V+P+ +TF LL C
Sbjct: 282 DDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNAC 341
Query: 253 SNHRRLNEGKKLQSCIL-KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV 306
S+ R+ EG+K S ++ K G V S I ++VD S G L A + + +P+
Sbjct: 342 SHTGRVEEGRKYFSQMVSKFGIVPS-IKHYGSMVDLLSRAGNLEDAYEFIDKLPI 395
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 209/402 (51%), Gaps = 10/402 (2%)
Query: 297 AKKSFEAI--PVENVISWNSLVSVNADNDLLCDALELFTVMQLWG-QSPSVRSLVGLLNS 353
A K F I P+ NV WN+L+ A+ A L+ M++ G P + L+ +
Sbjct: 72 AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 354 CSRAEEIGLGKQIHCHALKLGFDEGS-VHAQSALIDMYGKCSDIESSVAVFESLTKRTLE 412
+ ++ LG+ IH ++ GF GS ++ Q++L+ +Y C D+ S+ VF+ + ++ L
Sbjct: 131 VTTMADVRLGETIHSVVIRSGF--GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 413 CCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHC 472
NS++ + G ++ + L+ M +G+ PD T + L A + + T + +H
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL--GKRVHV 246
Query: 473 FALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQ 532
+ +K G+ + + L+D Y+RCG VE + +F+ + N++ +TS+I G A NG GK+
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKE 306
Query: 533 GLAVLHAMVE-KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCM 591
+ + M +GL P EITF+ L C+H GMVKEG F M+ + ++P HF CM
Sbjct: 307 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM 366
Query: 592 VDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDP 651
VDLL RAG P + + +W +LL +C H + ++ A +++L+P+
Sbjct: 367 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHS 426
Query: 652 AVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
++ SN YA + ++IR+ L + + GHS +E+
Sbjct: 427 GDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 468
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 206/411 (50%), Gaps = 48/411 (11%)
Query: 162 QVHCRVVKFGF-LSNVFVGGTLVGFYLNVGL-----REVARELFDELPER-NLAVWNVLL 214
Q+H ++ G +S+ +G L+ FYL V L A ++F ++ + N+ +WN L+
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLI-FYL-VSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92
Query: 215 RGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGF 273
RG+ E+G + + Y M G VEP+ T+ +L+K + + G+ + S +++ GF
Sbjct: 93 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 274 VESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFT 333
S I+V N+L+ Y+ CG + A K F+ +P +++++WNS+++ A+N +AL L+T
Sbjct: 153 -GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211
Query: 334 VMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKC 393
M G P ++V LL++C++ + LGK++H + +K+G ++H+ + L+D+Y +C
Sbjct: 212 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR-NLHSSNVLLDLYARC 270
Query: 394 SDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMID-EGLMPDEVTFSTT 452
+E + +F+ + + SL+ L+ G ++ +ELF M EGL+P E+TF
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 453 LKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP 512
L A S HC +K G E Y R E ++ P
Sbjct: 331 LYACS-------------HCGMVKEGFE------------YFRRMREEYKIE-------P 358
Query: 513 NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG 563
F M++ AR G K+ + +M ++P+ + + L C G
Sbjct: 359 RIEHFGCMVDLLARAGQVKKAYEYIKSM---PMQPNVVIWRTLLGACTVHG 406
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 133/254 (52%), Gaps = 14/254 (5%)
Query: 125 ALHLYGEMGLLGIRETST-TFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV 183
A LY EM + G+ E T T+ ++ R G +H V++ GF S ++V +L+
Sbjct: 104 AFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLL 163
Query: 184 GFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGV 243
Y N G A ++FD++PE++L WN ++ GF E G EE+L Y+ M G++P+G
Sbjct: 164 HLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 223
Query: 244 TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
T LL C+ L GK++ ++K+G N+ +N L+D Y+ CG + AK F+
Sbjct: 224 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTR-NLHSSNVLLDLYARCGRVEEAKTLFDE 282
Query: 304 IPVENVISWNSLVSVNADNDLLCDALELFTVMQ-LWGQSPSVRSLVGLLNSCSRAEEIGL 362
+ +N +SW SL+ A N +A+ELF M+ G P + VG+L +CS
Sbjct: 283 MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS------- 335
Query: 363 GKQIHCHALKLGFD 376
HC +K GF+
Sbjct: 336 ----HCGMVKEGFE 345
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 129/255 (50%), Gaps = 7/255 (2%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGL 134
+Y +N + + D+ SA VF MP +D V +N +I+ + PE+AL LY EM
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 215
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
GI+ T S+L+ CA+ G G +VH ++K G N+ L+ Y G E
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM-CFDGVEPNGVTFCYLLKVCS 253
A+ LFDE+ ++N W L+ G G +E++ + M +G+ P +TF +L CS
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISW 312
+ + EG + + + +E I +VD + G + A + +++P++ NV+ W
Sbjct: 336 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 395
Query: 313 NSLV---SVNADNDL 324
+L+ +V+ D+DL
Sbjct: 396 RTLLGACTVHGDSDL 410
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 212/419 (50%), Gaps = 4/419 (0%)
Query: 275 ESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTV 334
+ N +N L++ Y G LV A+K F+ +P + +WN++++ + + L LF
Sbjct: 22 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE 81
Query: 335 MQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
M G SP +L + + + + +G+QIH + +K G E + S+L MY +
Sbjct: 82 MHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL-ELDLVVNSSLAHMYMRNG 140
Query: 395 DIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
++ V S+ R L N+L+ + G + V+ L+ +M G P+++TF T L
Sbjct: 141 KLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLS 200
Query: 455 ALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNA 514
S S A Q +H A+K G AV SL+ YS+CG + + + F +
Sbjct: 201 --SCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDE 258
Query: 515 ICFTSMINGYARNGMGKQGLAVLHAMVEK-GLKPDEITFLCALTGCNHTGMVKEGRILFD 573
+ ++SMI+ Y +G G + + + + M E+ ++ +E+ FL L C+H+G+ +G LFD
Sbjct: 259 VMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFD 318
Query: 574 SMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNE 633
M +G +P +H++C+VDLL RAG P K D +W +LL +C HKN
Sbjct: 319 MMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNA 378
Query: 634 EVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
E+ R + ++++DP+D A ++ +N +A + E+R+ + + +E G S E
Sbjct: 379 EMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFE 437
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 163/336 (48%), Gaps = 6/336 (1%)
Query: 79 TKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC-FP-PEQALHLYGEMGLLG 136
+ N I+ ++++ DL +A VF MP R T+N +I+ F E+ L L+ EM LG
Sbjct: 27 SSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG 86
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
T SV + A G Q+H +K+G ++ V +L Y+ G +
Sbjct: 87 FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGE 146
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
+ +P RNL WN L+ G + GC E L Y M G PN +TF +L CS+
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV 316
+G+++ + +K+G S + V ++L+ YS CGCL A K+F E+ + W+S++
Sbjct: 207 IRGQGQQIHAEAIKIG-ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMI 265
Query: 317 SVNADNDLLCDALELFTVM-QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL-KLG 374
S + +A+ELF M + + + + LL +CS + G ++ + K G
Sbjct: 266 SAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG 325
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRT 410
F G H + ++D+ G+ ++ + A+ S+ +T
Sbjct: 326 FKPGLKH-YTCVVDLLGRAGCLDQAEAIIRSMPIKT 360
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 155/315 (49%), Gaps = 9/315 (2%)
Query: 148 LAVCARSGFHREGVQVHCRVVKFGFLS-NVFVGGTLVGFYLNVGLREVARELFDELPERN 206
+++ ++ G V V+ R+ K ++S N+ + G Y+ G AR++FDE+P+R
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILING-----YVRAGDLVNARKVFDEMPDRK 55
Query: 207 LAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQS 266
L WN ++ G + EE L+ + M G P+ T + + R ++ G+++
Sbjct: 56 LTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHG 115
Query: 267 CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLC 326
+K G +E ++ V ++L Y G L + ++PV N+++WN+L+ NA N
Sbjct: 116 YTIKYG-LELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPE 174
Query: 327 DALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSAL 386
L L+ +M++ G P+ + V +L+SCS G G+QIH A+K+G V S+L
Sbjct: 175 TVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASS-VVAVVSSL 233
Query: 387 IDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMP-D 445
I MY KC + + F +S++++ G + +ELF M ++ M +
Sbjct: 234 ISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEIN 293
Query: 446 EVTFSTTLKALSVSA 460
EV F L A S S
Sbjct: 294 EVAFLNLLYACSHSG 308
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 116/236 (49%), Gaps = 6/236 (2%)
Query: 87 FIKSRDLNSALAVFHTMPLRDTVTYNLLI--SAWCFPPEQALHLYGEMGLLGIRETSTTF 144
++++ L V +MP+R+ V +N LI +A PE L+LY M + G R TF
Sbjct: 136 YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITF 195
Query: 145 SSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPE 204
+VL+ C+ +G Q+H +K G S V V +L+ Y G A + F E +
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 255
Query: 205 RNLAVWNVLLRGFCELGCVEESLNYYSRMCFD-GVEPNGVTFCYLLKVCSNHRRLNEGKK 263
+ +W+ ++ + G +E++ ++ M +E N V F LL CS+ ++G +
Sbjct: 256 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLE 315
Query: 264 LQSCIL-KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLVS 317
L ++ K GF + + +VD GCL A+ ++P++ +++ W +L+S
Sbjct: 316 LFDMMVEKYGF-KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 370
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 152/580 (26%), Positives = 259/580 (44%), Gaps = 45/580 (7%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAV 150
L A VF MP + T+N ++S ++ + + E+ +G T ++F VL
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 151 CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVW 210
+ Q+HC K G + V +L+ Y G +A +F + ++ W
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 284
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILK 270
N ++ + ++L + M G PN T+ +L V S + L+ G+++ ++K
Sbjct: 285 NAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK 344
Query: 271 MGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADND-LLCDAL 329
G E+ I + NAL+DFY+ CG L ++ F+ I +N++ WN+L+S A+ D +C L
Sbjct: 345 NG-CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPIC--L 401
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSV--------H 381
LF M G P+ + L SC E +Q+H +++G+++ +
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSY 457
Query: 382 AQSALID-----------------------MYGKCSDIESSVAVFESLTKRTLECCNSLM 418
A++ L++ +Y + SV + +L + N +
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAI 517
Query: 419 TSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSG 478
+ S ++V+ELF M+ + PD+ TF + L S T SS +H K+
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSS--IHGLITKTD 575
Query: 479 VE-GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVL 537
D V L+D Y +CG + +++FE N I +T++I+ +G G++ L
Sbjct: 576 FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 538 HAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR 597
+ G KPD ++F+ LT C H GMVKEG LF MK +GV+P+ H+ C VDLL R
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLAR 694
Query: 598 AGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGT 637
G + P D +W + L C E+ T
Sbjct: 695 NGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEEQRNT 734
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/525 (27%), Positives = 263/525 (50%), Gaps = 26/525 (4%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCF--PPEQALHLYGEMGL 134
VY N I + K +++ A VF MP R+ V++N +I + ++A ++ EM
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFG-FLSNVFVGGTLVGFYLNVGLRE 193
G +T S +L+ CA R G Q+H +K+G F+++ FVG L+ Y + L E
Sbjct: 109 FGYLPNQSTVSGLLS-CASLDV-RAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
+A ++F+++P ++L WN ++ G ++E + ++ + G +F +LK S
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWN 313
+ L+ K+L K G ++ I V N+L+ Y CG A++ F+ +++SWN
Sbjct: 227 CVKDLDISKQLHCSATKKG-LDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWN 285
Query: 314 SLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL 373
+++ A ++ AL+LF M G SP+ + V +L S + + G+QIH +K
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN 345
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQD---V 430
G + G V +ALID Y KC ++E S F+ + + + C N+L++ A +D
Sbjct: 346 GCETGIVLG-NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY----ANKDGPIC 400
Query: 431 VELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLM 490
+ LF M+ G P E TFST LK+ V T Q LH ++ G E + V SLM
Sbjct: 401 LSLFLQMLQMGFRPTEYTFSTALKSCCV------TELQQLHSVIVRMGYEDNDYVLSSLM 454
Query: 491 DAYSRCGHVELSLQIFETLSSPNAICFTSMING-YARNGMGKQGLAVLHAMVEKGLKPDE 549
+Y++ + +L + + S P ++ +++ G Y+R G + + ++ + + PD
Sbjct: 455 RSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQ----PDT 510
Query: 550 ITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDL 594
+++ A+ C+ + +E LF M + ++PD+ F ++ L
Sbjct: 511 VSWNIAIAACSRSDYHEEVIELFKHMLQSN-IRPDKYTFVSILSL 554
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 205/416 (49%), Gaps = 8/416 (1%)
Query: 146 SVLAVCARSGFHREGVQVHCRVVKF--GFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
S+L VC ++ +H + L V+V ++ Y +G +A ++FD++P
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKK 263
ERN +N +++G+ + G V+++ +S M + G PN T LL S R G +
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVR--AGTQ 134
Query: 264 LQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADND 323
L LK G ++ FV L+ Y L A++ FE +P +++ +WN ++S+
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 324 LLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ 383
L + + F + G S + S +G+L S +++ + KQ+HC A K G D +
Sbjct: 195 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLD-CEISVV 253
Query: 384 SALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLM 443
++LI YGKC + + +F+ + N+++ + + ++LF M + G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 444 PDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSL 503
P++ T+ + L S+ + + +H +K+G E + +L+D Y++CG++E S
Sbjct: 314 PNQGTYVSVLGVSSL--VQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSR 371
Query: 504 QIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGC 559
F+ + N +C+ ++++GYA N G L++ M++ G +P E TF AL C
Sbjct: 372 LCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 185/417 (44%), Gaps = 43/417 (10%)
Query: 75 DC-VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLI--SAWCFPPEQALHLYGE 131
DC + N I A+ K + + A +F D V++N +I +A P +AL L+
Sbjct: 247 DCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS 306
Query: 132 MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
M G T+ SVL V + G Q+H ++K G + + +G L+ FY G
Sbjct: 307 MPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGN 366
Query: 192 REVARELFDELPERNLAVWNVLLRGFC-ELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
E +R FD + ++N+ WN LL G+ + G + L+ + +M G P TF LK
Sbjct: 367 LEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFSTALK 424
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYS-------ACGCLVGAKKSFEA 303
C + E ++L S I++MG+ E N +V ++L+ Y+ A L A
Sbjct: 425 SCC----VTELQQLHSVIVRMGY-EDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSV 479
Query: 304 IPVE-------------------------NVISWNSLVSVNADNDLLCDALELFTVMQLW 338
+P+ + +SWN ++ + +D + +ELF M
Sbjct: 480 VPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQS 539
Query: 339 GQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIES 398
P + V +L+ CS+ ++ LG IH K F + LIDMYGKC I S
Sbjct: 540 NIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRS 599
Query: 399 SVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
+ VFE ++ L +L++ L G Q+ +E F + G PD V+F + L A
Sbjct: 600 VMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTA 656
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 223/446 (50%), Gaps = 19/446 (4%)
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
F LL+ C + R ++ G ++ I + +N+ +++ LV Y++CG A + F+ +
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPY-LLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 305 PVEN--VISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
+ +WNSL+S A+ DA+ L+ M G P + +L +C + +
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLS 422
G+ IH +K GF V+ +AL+ MY KC DI + VF+ + + NS++T
Sbjct: 214 GEAIHRDLVKEGFGY-DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYL 272
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGD 482
H G + +++F LM+ G+ PD+V S+ L + +F + LH + ++ G+E +
Sbjct: 273 HHGLLHEALDIFRLMVQNGIEPDKVAISSVLARV-----LSFKHGRQLHGWVIRRGMEWE 327
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVE 542
+VA +L+ YS+ G + + IF+ + + + + ++I+ +++N GL M
Sbjct: 328 LSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMHR 384
Query: 543 KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXX 602
KPD ITF+ L+ C +TGMV++G LF M +G+ P H++CMV+L RAG
Sbjct: 385 ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 603 XXXXXXXQTPD-KRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFY 661
Q + +W +LL +C H N ++G AAQ L EL+PD+ NF
Sbjct: 445 EAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDN------EHNFE 498
Query: 662 AEIGNFDASREIREVALARKMTREIG 687
I + ++ +V R+M + G
Sbjct: 499 LLIRIYSKAKRAEDVERVRQMMVDRG 524
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 211/458 (46%), Gaps = 48/458 (10%)
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
F+S+L C GV+VH + + +N+ + LV Y + G EVA E+FD +
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 204 ERNLA--VWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+R+ + WN L+ G+ ELG E+++ Y +M DGV+P+ TF +LK C + G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
+ + ++K GF +++V NALV Y+ CG +V A+ F+ IP ++ +SWNS+++
Sbjct: 215 EAIHRDLVKEGF-GYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLH 273
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
+ LL +AL++F +M G P ++ +L +R G+Q+H ++ G E +
Sbjct: 274 HGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGM-EWELS 329
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
+ALI +Y K + + +F+ + +R N+++++ S + ++ F M
Sbjct: 330 VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHS---KNSNGLKYFEQMHRAN 386
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVEL 501
PD +TF + L +G+ D SLM
Sbjct: 387 AKPDGITFVSVL------------------SLCANTGMVEDGERLFSLMSK--------- 419
Query: 502 SLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNH 561
E P + M+N Y R GM ++ +++ + E GL+ + L C
Sbjct: 420 -----EYGIDPKMEHYACMVNLYGRAGMMEEAYSMI--VQEMGLEAGPTVWGALLYACYL 472
Query: 562 TGMVKEGRILFDSMKSVHGVQPDQRH-FSCMVDLLCRA 598
G G + + + + ++PD H F ++ + +A
Sbjct: 473 HGNTDIGEV---AAQRLFELEPDNEHNFELLIRIYSKA 507
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 15/314 (4%)
Query: 96 ALAVFHTMPLRDT--VTYNLLISAWC--FPPEQALHLYGEMGLLGIRETSTTFSSVLAVC 151
A VF M RD+ +N LIS + E A+ LY +M G++ TF VL C
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 152 ARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWN 211
G + G +H +VK GF +V+V LV Y G AR +FD +P ++ WN
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 212 VLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLL-KVCSNHRRLNEGKKLQSCILK 270
+L G+ G + E+L+ + M +G+EP+ V +L +V S G++L +++
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS----FKHGRQLHGWVIR 321
Query: 271 MGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALE 330
G +E + VANAL+ YS G L A F+ + + +SWN+++S ++ N + L+
Sbjct: 322 RG-MEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLK 377
Query: 331 LFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK-LGFDEGSVHAQSALIDM 389
F M P + V +L+ C+ + G+++ K G D H + ++++
Sbjct: 378 YFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEH-YACMVNL 436
Query: 390 YGKCSDIESSVAVF 403
YG+ +E + ++
Sbjct: 437 YGRAGMMEEAYSMI 450
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 238/483 (49%), Gaps = 34/483 (7%)
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
+ + L++C+ +R L K L + I+K+G V+ +AN LV+ Y CG A + F+ +
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQC-CPLANTLVNVYGKCGAASHALQVFDEM 64
Query: 305 PVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEIGLG 363
P + I+W S+++ +L L +F+ + P L+ +C+ I G
Sbjct: 65 PHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHG 124
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH 423
+Q+HCH + + V +S+L+DMY KC + S+ AVF+S+ + ++++ +
Sbjct: 125 RQVHCHFIVSEYANDEV-VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183
Query: 424 CGATQDVVELFGLMIDE------GLMPDEVTFSTTLKALS-------------------- 457
G ++ +ELF ++ + L+ V L+A S
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243
Query: 458 -VSASATFTSS---QLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPN 513
V A A +S + +H + G + ++ +L+D Y++C V + IF + +
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRD 303
Query: 514 AICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFD 573
+ +TS+I G A++G ++ LA+ MV G+KP+E+TF+ + C+H G V++GR LF
Sbjct: 304 VVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQ 363
Query: 574 SMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNE 633
SM +G++P +H++C++DLL R+G P D W++LL +C+
Sbjct: 364 SMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRG 423
Query: 634 EVGTRAAQVLV-ELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
++G R A LV DP+ ++ SN YA + E R ++ ++ GHSS+E
Sbjct: 424 QMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 483
Query: 693 IRQ 695
+R+
Sbjct: 484 VRK 486
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 197/440 (44%), Gaps = 37/440 (8%)
Query: 148 LAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNL 207
L +CAR+ +H +VK G + + TLV Y G A ++FDE+P R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 208 AVWNVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQS 266
W +L + ++L+ +S + + P+ F L+K C+N ++ G+++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH- 128
Query: 267 CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLC 326
C + ++ V ++LVD Y+ CG L AK F++I V+N ISW ++VS A +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 327 DALELFTVMQL-----WGQ--SPSVRSLVGL-------------------------LNSC 354
+ALELF ++ + W S V+S GL + +C
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 355 SRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC 414
+ G+Q+H + LGFD V +ALIDMY KCSD+ ++ +F + R +
Sbjct: 249 ANLAASIAGRQVHGLVIALGFD-SCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSW 307
Query: 415 NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFA 474
SL+ ++ G + + L+ M+ G+ P+EVTF + A S +L
Sbjct: 308 TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACS-HVGFVEKGRELFQSMT 366
Query: 475 LKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQG 533
G+ L+D R G ++ + + T+ P+ + ++++ R G G+ G
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 534 LAVLHAMVEKGLKPDEITFL 553
+ + +V D T++
Sbjct: 427 IRIADHLVSSFKLKDPSTYI 446
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 158/357 (44%), Gaps = 46/357 (12%)
Query: 76 CVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGE---- 131
C N ++ + K + AL VF MP RD + + +++A QA +L G+
Sbjct: 37 CCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTAL----NQA-NLSGKTLSV 91
Query: 132 ----MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL 187
G+R FS+++ CA G G QVHC + + ++ V +LV Y
Sbjct: 92 FSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYA 151
Query: 188 NVGL-------------------------------REVARELFDELPERNLAVWNVLLRG 216
GL +E A ELF LP +NL W L+ G
Sbjct: 152 KCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISG 211
Query: 217 FCELGCVEESLNYYSRMCFDGVEP-NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVE 275
F + G E+ + ++ M + V+ + + ++ C+N G+++ ++ +GF +
Sbjct: 212 FVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGF-D 270
Query: 276 SNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVM 335
S +F++NAL+D Y+ C ++ AK F + +V+SW SL+ A + AL L+ M
Sbjct: 271 SCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM 330
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGK 392
G P+ + VGL+ +CS + G+++ K S+ + L+D+ G+
Sbjct: 331 VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGR 387
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 12/242 (4%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRE-- 139
+ + KS AL +F +P+++ ++ LIS + + +A ++ EM RE
Sbjct: 178 VSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR----RERV 233
Query: 140 ---TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
SS++ CA G QVH V+ GF S VF+ L+ Y A+
Sbjct: 234 DILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAK 293
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
++F + R++ W L+ G + G E++L Y M GV+PN VTF L+ CS+
Sbjct: 294 DIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVG 353
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV-ENVISWNSL 315
+ +G++L + K + ++ L+D G L A+ +P + +W +L
Sbjct: 354 FVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAAL 413
Query: 316 VS 317
+S
Sbjct: 414 LS 415
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 4/143 (2%)
Query: 76 CVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLI--SAWCFPPEQALHLYGEMG 133
CV+ N ID + K D+ +A +F M RD V++ LI A E+AL LY +M
Sbjct: 272 CVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMV 331
Query: 134 LLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVK-FGFLSNVFVGGTLVGFYLNVGLR 192
G++ TF ++ C+ GF +G ++ + K +G ++ L+ GL
Sbjct: 332 SHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLL 391
Query: 193 EVARELFDELP-ERNLAVWNVLL 214
+ A L +P + W LL
Sbjct: 392 DEAENLIHTMPFPPDEPTWAALL 414
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 160/640 (25%), Positives = 283/640 (44%), Gaps = 85/640 (13%)
Query: 79 TKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP-----EQALHLYGEMG 133
T N I ++K R++N A +F MP RD VT+N +IS + E+A L+ EM
Sbjct: 73 TWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMP 132
Query: 134 LLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE 193
S +++++++ G+ N +G L+
Sbjct: 133 ----SRDSFSWNTMIS---------------------GYAKNRRIGEALL---------- 157
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
LF+++PERN W+ ++ GFC+ G V+ ++ + +M P C L+
Sbjct: 158 ----LFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLI 209
Query: 254 NHRRLNEGKKL--QSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP------ 305
+ RL+E + Q L G E ++ N L+ Y G + A+ F+ IP
Sbjct: 210 KNERLSEAAWVLGQYGSLVSG-REDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDD 268
Query: 306 ---------VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSR 356
+NV+SWNS++ + A LF M+ + S +++ SR
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD-RDTISWNTMIDGYVHVSR 327
Query: 357 AEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNS 416
E+ AL H+ + ++ Y ++E + FE ++ NS
Sbjct: 328 MED--------AFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNS 379
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQL---LHCF 473
++ + ++ V+LF M EG PD T ++ L SAS + +L +H
Sbjct: 380 IIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL-----SASTGLVNLRLGMQMHQI 434
Query: 474 ALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQ 532
+K+ V D V +L+ YSRCG + S +IF+ + I + +MI GYA +G +
Sbjct: 435 VVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASE 493
Query: 533 GLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMV 592
L + +M G+ P ITF+ L C H G+V E + F SM SV+ ++P H+S +V
Sbjct: 494 ALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLV 553
Query: 593 DLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPA 652
++ G P + D +W +LL +CR + N + AA+ + L+P+
Sbjct: 554 NVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESST 613
Query: 653 VWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
++ N YA++G +D + ++R ++++ +E G S ++
Sbjct: 614 PYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/534 (23%), Positives = 243/534 (45%), Gaps = 77/534 (14%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYG 130
PS ++ N I + K+R + AL +F MP R+ V+++ +I+ +C E A+ L+
Sbjct: 132 PSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFR 191
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSN-----VFVGGTLVGF 185
+M + + S+ +++A ++ E V + ++G L + V+ TL+
Sbjct: 192 KMPV----KDSSPLCALVAGLIKNERLSEAAWV---LGQYGSLVSGREDLVYAYNTLIVG 244
Query: 186 YLNVGLREVARELFDELPE---------------RNLAVWNVLLRGFCELGCVEESLNYY 230
Y G E AR LFD++P+ +N+ WN +++ + ++G V
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVS----- 299
Query: 231 SRMCFDGVEP-NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYS 289
+R+ FD ++ + +++ ++ + R+ + L S +M +++ + N +V Y+
Sbjct: 300 ARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFS---EMPNRDAHSW--NMMVSGYA 354
Query: 290 ACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVG 349
+ G + A+ FE P ++ +SWNS+++ N +A++LF M + G+ P +L
Sbjct: 355 SVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 350 LLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLT-K 408
LL++ + + LG Q+H +K + VH +ALI MY +C +I S +F+ + K
Sbjct: 415 LLSASTGLVNLRLGMQMHQIVVKTVIPDVPVH--NALITMYSRCGEIMESRRIFDEMKLK 472
Query: 409 RTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA-----LSVSASAT 463
R + N+++ + G + + LFG M G+ P +TF + L A L A A
Sbjct: 473 REVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQ 532
Query: 464 FTS--------SQLLHCFAL---KSG---------------VEGDAAVACSLMDA---YS 494
F S Q+ H +L SG E D V +L+DA Y+
Sbjct: 533 FVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYN 592
Query: 495 RCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPD 548
G ++ + L ++ + + N YA G+ + V M K +K +
Sbjct: 593 NVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKE 646
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 231/499 (46%), Gaps = 51/499 (10%)
Query: 193 EVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
++A ++ E N+ V+N L +GF SL Y RM D V P+ T+ L+K
Sbjct: 822 DLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKAS 881
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISW 312
S R G+ LQ+ I K GF ++ + L+DFYSA G + A+K F+ +P + I+W
Sbjct: 882 SFASRF--GESLQAHIWKFGF-GFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAW 938
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
++VS + R ++ + ++ S A ++
Sbjct: 939 TTMVS-------------------------AYRRVLDMDSANSLANQMS----------- 962
Query: 373 LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVE 432
E + + LI+ Y ++E + ++F + + + +++ S ++ +
Sbjct: 963 ----EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIA 1018
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDA 492
+F M++EG++PDEVT ST + A + + +H + L++G D + +L+D
Sbjct: 1019 VFYKMMEEGIIPDEVTMSTVISA--CAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDM 1076
Query: 493 YSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
YS+CG +E +L +F L N C+ S+I G A +G ++ L + M + +KP+ +TF
Sbjct: 1077 YSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF 1136
Query: 553 LCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTP 612
+ T C H G+V EGR ++ SM + + + H+ MV L +AG
Sbjct: 1137 VSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNME 1196
Query: 613 DKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASRE 672
+ + +W +LL CR HKN + A L+ L+P + + + YAE +
Sbjct: 1197 FEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRW----- 1251
Query: 673 IREVALARKMTREIGHSSI 691
R+VA R RE+G I
Sbjct: 1252 -RDVAEIRGRMRELGIEKI 1269
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 164/381 (43%), Gaps = 83/381 (21%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLLGIR 138
N+ I A + L+ A++ M + YN L + C P ++L LY M +
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
+S T+SS++ + + E +Q H + KFGF +V + TL+ FY G AR++
Sbjct: 869 PSSYTYSSLVKASSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKV 926
Query: 199 FDELPERNLAVW-------------------------------NVLLRGFCELGCVE--- 224
FDE+PER+ W N L+ G+ LG +E
Sbjct: 927 FDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAE 986
Query: 225 ----------------------------ESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
E++ + +M +G+ P+ VT ++ C++
Sbjct: 987 SLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLG 1046
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV 316
L GK++ L+ GFV ++++ +ALVD YS CG L A F +P +N+ WNS++
Sbjct: 1047 VLEIGKEVHMYTLQNGFV-LDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSII 1105
Query: 317 SVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD 376
A + +AL++F M++ P+ + V + +C+ A + G++I+
Sbjct: 1106 EGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY--------- 1156
Query: 377 EGSVHAQSALIDMYGKCSDIE 397
++ID Y S++E
Sbjct: 1157 -------RSMIDDYSIVSNVE 1170
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 125/241 (51%), Gaps = 3/241 (1%)
Query: 79 TKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLG 136
T N I+ ++ +L A ++F+ MP++D +++ +I + +A+ ++ +M G
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
I T S+V++ CA G G +VH ++ GF+ +V++G LV Y G E A
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 1087
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
+F LP++NL WN ++ G G +E+L +++M + V+PN VTF + C++
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSL 315
++EG+++ ++ + SN+ +V +S G + A + + E N + W +L
Sbjct: 1148 LVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGAL 1207
Query: 316 V 316
+
Sbjct: 1208 L 1208
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 8/180 (4%)
Query: 396 IESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
++ +V+ + + + N+L C +EL+ M+ + + P T+S+ +KA
Sbjct: 821 LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA 880
Query: 456 LSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAI 515
S ++ F S H + K G + +L+D YS G + + ++F+ + + I
Sbjct: 881 SSFASR--FGESLQAHIW--KFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDI 936
Query: 516 CFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSM 575
+T+M++ Y R ++ + M EK +E T C + G G +++ LF+ M
Sbjct: 937 AWTTMVSAYRRVLDMDSANSLANQMSEK----NEATSNCLINGYMGLGNLEQAESLFNQM 992
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 224/464 (48%), Gaps = 42/464 (9%)
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVG--AKKSFEAIPVENVISWNSL 315
LN+ K++ +L+ G +S ++ L+ + G + A++ E + N W ++
Sbjct: 62 LNQIKQIHGHVLRKGLDQS-CYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120
Query: 316 VSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL-G 374
+ A +A+ ++ M+ +P + LL +C +++ LG+Q H +L G
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRG 180
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR----------------TLECCNSLM 418
F V+ + +IDMY KC I+ + VF+ + +R +EC L
Sbjct: 181 F--CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 419 TSL---------------SHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASAT 463
SL + Q+ +E F M G+ DEVT + + A + ++
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 464 FTSSQLLHCFALKSGVE--GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMI 521
+ + A KSG + +L+D YS+CG+VE ++ +F ++++ N ++SMI
Sbjct: 299 YADRAVQ--IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMI 356
Query: 522 NGYARNGMGKQGLAVLHAMV-EKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHG 580
G A +G ++ L + H MV + +KP+ +TF+ AL C+H+G+V +GR +FDSM G
Sbjct: 357 LGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFG 416
Query: 581 VQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAA 640
VQP + H++CMVDLL R G + +W +LL +CR H N E+ AA
Sbjct: 417 VQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAA 476
Query: 641 QVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTR 684
+ L EL+PD ++ SN YA G++ +R++ + + +
Sbjct: 477 EHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKK 520
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 173/385 (44%), Gaps = 39/385 (10%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFY--LNVGLREVARELFDELPERNLAVWNVLLRGFCE 219
Q+H V++ G + ++ L+ L V + AR + + + RN +W ++RG+
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKM-GFVESNI 278
G +E++ Y M + + P TF LLK C + LN G++ + ++ GF +
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFC--FV 184
Query: 279 FVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNA----------------DN 322
+V N ++D Y C + A+K F+ +P +VISW L++ A
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK 244
Query: 323 DLLC---------------DALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
D++ +ALE F M+ G ++ G +++C++ +
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 368 CHALKLGFDEGS-VHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGA 426
A K G+ V SALIDMY KC ++E +V VF S+ + + +S++ L+ G
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 427 TQDVVELFGLMIDEG-LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAV 485
Q+ + LF M+ + + P+ VTF L A S S Q+ GV+
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVD-QGRQVFDSMYQTFGVQPTRDH 423
Query: 486 ACSLMDAYSRCGHVELSLQIFETLS 510
++D R G ++ +L++ +T+S
Sbjct: 424 YTCMVDLLGRTGRLQEALELIKTMS 448
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 151/347 (43%), Gaps = 35/347 (10%)
Query: 96 ALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCAR 153
A V + R+ + +I + ++A+ +YG M I S TFS++L C
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 154 SGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVL 213
G Q H + + V+VG T++ Y+ + AR++FDE+PER++ W L
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 214 LRGFCELGCVE-------------------------------ESLNYYSRMCFDGVEPNG 242
+ + +G +E E+L Y+ RM G+ +
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 243 VTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESN-IFVANALVDFYSACGCLVGAKKSF 301
VT + C+ + K G+ S+ + + +AL+D YS CG + A F
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 302 EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEI 360
++ +NV +++S++ A + +AL LF M + P+ + VG L +CS + +
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLT 407
G+Q+ + + + + ++D+ G+ ++ ++ + ++++
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 448
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 129/321 (40%), Gaps = 41/321 (12%)
Query: 344 VRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVA-- 401
V SL+ L+ C +I KQIH H L+ G D+ S + + LI K A
Sbjct: 49 VSSLISKLDDCINLNQI---KQIHGHVLRKGLDQ-SCYILTKLIRTLTKLGVPMDPYARR 104
Query: 402 VFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSAS 461
V E + R +++ + G + + ++G M E + P TFS LKA
Sbjct: 105 VIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKD 164
Query: 462 ATFTS---SQLLH----CFALKSGVEGDAAVACSLMD----------------------A 492
+Q CF D V C +D A
Sbjct: 165 LNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAA 224
Query: 493 YSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
Y+R G++E + ++FE+L + + + +T+M+ G+A+N ++ L M + G++ DE+T
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 553 LCALTGCNHTGMVKEG-RILFDSMKSVHGVQPDQRHF--SCMVDLLCRAGXXXXXXXXXX 609
++ C G K R + + KS G P S ++D+ + G
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKS--GYSPSDHVVIGSALIDMYSKCGNVEEAVNVFM 342
Query: 610 QTPDKRDCFMWSSLLRSCRSH 630
+K + F +SS++ +H
Sbjct: 343 SMNNK-NVFTYSSMILGLATH 362
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 36/267 (13%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--------------FP- 121
VY N ID ++K ++ A VF MP RD +++ LI+A+ P
Sbjct: 184 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 243
Query: 122 ------------------PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQV 163
P++AL + M GIR T + ++ CA+ G + +
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 164 HCRVVKFGF--LSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
K G+ +V +G L+ Y G E A +F + +N+ ++ ++ G G
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHG 363
Query: 222 CVEESLNYYSRMCFDG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
+E+L+ + M ++PN VTF L CS+ +++G+++ + + V+
Sbjct: 364 RAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH 423
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVE 307
+VD G L A + + + VE
Sbjct: 424 YTCMVDLLGRTGRLQEALELIKTMSVE 450
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 228/491 (46%), Gaps = 66/491 (13%)
Query: 244 TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
+ CY++ N LN K +++C S G L A F
Sbjct: 34 SHCYMIITGLNRDNLNVAKFIEAC---------------------SNAGHLRYAYSVFTH 72
Query: 304 IPVENVISWNSLV-SVNADNDLLCDALELFTVMQLWG--QSPSVRSLVGLLNSCSRAEEI 360
P N N+++ +++ ++ ++ + +LW P + +L R ++
Sbjct: 73 QPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDV 132
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLM-- 418
G+QIH + GFD SVH + LI MY C + + +F+ + + + N+L+
Sbjct: 133 WFGRQIHGQVVVFGFDS-SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAG 191
Query: 419 -------------------------------TSLSHCGATQDVVELFGLMIDEGLMPDEV 447
+ + G + +E+F M+ E + PDEV
Sbjct: 192 YGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEV 251
Query: 448 TFSTTLKALSVSASATFTSSQL---LHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQ 504
T L SA A S +L + + G+ ++ +++D Y++ G++ +L
Sbjct: 252 TLLAVL-----SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALD 306
Query: 505 IFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGM 564
+FE ++ N + +T++I G A +G G + LA+ + MV+ G++P+++TF+ L+ C+H G
Sbjct: 307 VFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGW 366
Query: 565 VKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
V G+ LF+SM+S +G+ P+ H+ CM+DLL RAG P K + +W SLL
Sbjct: 367 VDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLL 426
Query: 625 RSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTR 684
+ H + E+G RA L++L+P++ ++ +N Y+ +G +D SR +R + + +
Sbjct: 427 AASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKK 486
Query: 685 EIGHSSIEIRQ 695
G SSIE+
Sbjct: 487 MAGESSIEVEN 497
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 41/362 (11%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALH-----LYGEMGLLGIR 138
I+A + L A +VF P +T +N +I A E H +Y ++ L +
Sbjct: 54 IEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAK 113
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
+ TF VL + R G Q+H +VV FGF S+V V L+ Y + G AR++
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 199 FDELPERNLAVWNVLLRGFCELG-----------------------CV----------EE 225
FDE+ +++ VWN LL G+ ++G CV E
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 226 SLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALV 285
++ + RM + VEP+ VT +L C++ L G+++ S + G + + + NA++
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRA-VSLNNAVI 292
Query: 286 DFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVR 345
D Y+ G + A FE + NV++W ++++ A + +AL +F M G P+
Sbjct: 293 DMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDV 352
Query: 346 SLVGLLNSCSRAEEIGLGKQI-HCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFE 404
+ + +L++CS + LGK++ + K G H +ID+ G+ + + V +
Sbjct: 353 TFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEH-YGCMIDLLGRAGKLREADEVIK 411
Query: 405 SL 406
S+
Sbjct: 412 SM 413
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 171/397 (43%), Gaps = 40/397 (10%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFC--- 218
Q HC ++ G + + N G A +F P N + N ++R
Sbjct: 33 QSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLD 92
Query: 219 ELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNI 278
E ++ Y ++ +P+ TF ++LK+ + G+++ ++ GF +S++
Sbjct: 93 EPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF-DSSV 151
Query: 279 FVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSL----------------------- 315
V L+ Y +CG L A+K F+ + V++V WN+L
Sbjct: 152 HVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCW 211
Query: 316 ----------VSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ 365
+S A + +A+E+F M + P +L+ +L++C+ + LG++
Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER 271
Query: 366 IHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG 425
I + G + +V +A+IDMY K +I ++ VFE + +R + +++ L+ G
Sbjct: 272 ICSYVDHRGMNR-AVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG 330
Query: 426 ATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAV 485
+ + +F M+ G+ P++VTF L A S +L + K G+ +
Sbjct: 331 HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDL-GKRLFNSMRSKYGIHPNIEH 389
Query: 486 ACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMI 521
++D R G + + ++ +++ NA + S++
Sbjct: 390 YGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLL 426
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 6/250 (2%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMP--LRDTVTYNLLISAWCFP--PEQALHLYGEMGLLG 136
N + + K +++ A ++ MP +R+ V++ +IS + +A+ ++ M +
Sbjct: 186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
+ T +VL+ CA G G ++ V G V + ++ Y G A
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKAL 305
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
++F+ + ERN+ W ++ G G E+L ++RM GV PN VTF +L CS+
Sbjct: 306 DVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVG 365
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSL 315
++ GK+L + + + NI ++D G L A + +++P + N W SL
Sbjct: 366 WVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSL 425
Query: 316 VSV-NADNDL 324
++ N +DL
Sbjct: 426 LAASNVHHDL 435
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 230/480 (47%), Gaps = 43/480 (8%)
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVG---AKKSFEAI 304
LL++ H ++ + +L+ SN+ +A+ F S CG L A + F I
Sbjct: 7 LLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAH----FISICGSLSNSDYANRVFSHI 62
Query: 305 PVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGK 364
NV+ +N+++ + ++L F+ M+ G + LL SCS ++ GK
Sbjct: 63 QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGK 122
Query: 365 QIHCHALKLGF------------------------------DEGSVHAQSALIDMYGKCS 394
+H ++ GF E +V + +I +
Sbjct: 123 CVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSG 182
Query: 395 DIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
D+E + +F+ +++R++ NS+++SLS CG ++ +ELF MID+G PDE T T L
Sbjct: 183 DVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLP 242
Query: 455 ALSVSAS-ATFTSSQLLHCFALKSGVEGD-AAVACSLMDAYSRCGHVELSLQIFETLSSP 512
+SAS + + +H A SG+ D V +L+D Y + G +E + IF +
Sbjct: 243 ---ISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR 299
Query: 513 NAICFTSMINGYARNGMGKQGLAVLHAMVEKG-LKPDEITFLCALTGCNHTGMVKEGRIL 571
N + + ++I+G A NG G+ G+ + AM+E+G + P+E TFL L C++TG V+ G L
Sbjct: 300 NVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEEL 359
Query: 572 FDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHK 631
F M ++ H+ MVDL+ R+G P + MW SLL +CRSH
Sbjct: 360 FGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Query: 632 NEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSI 691
+ ++ AA LV+++P + ++ SN YAE G + ++R + ++ + G S+I
Sbjct: 420 DVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 157/344 (45%), Gaps = 38/344 (11%)
Query: 99 VFHTMPLRDTVTYNLLISAWCF--PPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGF 156
VF + + + +N +I + PP ++L + M GI T++ +L C+
Sbjct: 58 VFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSD 117
Query: 157 HREGVQVHCRVVKFGF--LSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLL 214
R G VH +++ GF L + +G +V Y + G A+++FDE+ ERN+ VWN+++
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIG--VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMI 175
Query: 215 RGFCELGCVE-------------------------------ESLNYYSRMCFDGVEPNGV 243
RGFC+ G VE E+L + M G +P+
Sbjct: 176 RGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEA 235
Query: 244 TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
T +L + ++ L+ GK + S G + I V NALVDFY G L A F
Sbjct: 236 TVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRK 295
Query: 304 IPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEIGL 362
+ NV+SWN+L+S +A N ++LF M G+ +P+ + +G+L CS ++
Sbjct: 296 MQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVER 355
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESL 406
G+++ ++ E A++D+ + I + +++
Sbjct: 356 GEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNM 399
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 177/388 (45%), Gaps = 37/388 (9%)
Query: 193 EVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
+ A +F + N+ V+N +++ + +G ESL+++S M G+ + T+ LLK C
Sbjct: 53 DYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSC 112
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISW 312
S+ L GK + +++ GF + +V+ Y++ G + A+K F+ + NV+ W
Sbjct: 113 SSLSDLRFGKCVHGELIRTGFHRLGK-IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVW 171
Query: 313 NSLV----------------------SVNADNDLLC---------DALELFTVMQLWGQS 341
N ++ S+ + N ++ +ALELF M G
Sbjct: 172 NLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFD 231
Query: 342 PSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVA 401
P ++V +L + + GK IH A G + + +AL+D Y K D+E++ A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 402 VFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG-LMPDEVTFSTTLKALSVSA 460
+F + +R + N+L++ + G + ++LF MI+EG + P+E TF L S +
Sbjct: 292 IFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTG 351
Query: 461 SATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTS 519
+L + +E +++D SR G + + + + + + NA + S
Sbjct: 352 QVE-RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGS 410
Query: 520 MINGYARNGMGKQGLAVLHAMVEKGLKP 547
+++ +G K LA + AM ++P
Sbjct: 411 LLSACRSHGDVK--LAEVAAMELVKIEP 436
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 111/246 (45%), Gaps = 5/246 (2%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGL 134
V N I F S D+ L +F M R V++N +IS+ C +AL L+ EM
Sbjct: 168 VVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMID 227
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSN-VFVGGTLVGFYLNVGLRE 193
G T +VL + A G G +H G + + VG LV FY G E
Sbjct: 228 QGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLE 287
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVC 252
A +F ++ RN+ WN L+ G G E ++ + M +G V PN TF +L C
Sbjct: 288 AATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACC 347
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVIS 311
S ++ G++L +++ +E+ A+VD S G + A K + +PV N
Sbjct: 348 SYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAM 407
Query: 312 WNSLVS 317
W SL+S
Sbjct: 408 WGSLLS 413
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 246/507 (48%), Gaps = 28/507 (5%)
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
W L+R + +E+++ Y M G+ P+ +L+ C + +GK + + L
Sbjct: 72 WGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQAL 131
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
K G ++V LV YS G + AKK+F+ I +N +SWNSL+ ++ L +A
Sbjct: 132 KNGLCGC-VYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 330 ELFTVMQ-----LWGQSPSVRSLVGLL-NSCS----------RAEEIGLGKQIHCHALKL 373
+F + W S + G + N+CS + I +G ++C +KL
Sbjct: 191 RVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKL 250
Query: 374 G---FDEGSVHAQSALIDM---YGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGAT 427
FD + I M Y K D++S+ +F ++K+ ++++ + G
Sbjct: 251 ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKP 310
Query: 428 QDVVELFGLMIDEG--LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAV 485
+D ++LF M++ + PDE+T S+ + A S + +F + + + + G++ D +
Sbjct: 311 KDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGT--WVESYITEHGIKIDDLL 368
Query: 486 ACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGL 545
+ SL+D Y + G + ++F L+ + + +++MI G NGM + ++ AM+EK +
Sbjct: 369 STSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKI 428
Query: 546 KPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXX 605
P+ +TF L+ +H+G+V+EG F+SMK H ++P H+ MVD+L RAG
Sbjct: 429 PPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAY 487
Query: 606 XXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIG 665
P + + +W +LL + H N E G A V+L+ D + Y+ +G
Sbjct: 488 ELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVG 547
Query: 666 NFDASREIREVALARKMTREIGHSSIE 692
+D +R +R+ +K+ + +G S +E
Sbjct: 548 RWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 191/435 (43%), Gaps = 50/435 (11%)
Query: 123 EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL 182
++ + +Y +M GI +S +SVL C + +G +H + +K G V+V L
Sbjct: 86 KETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGL 145
Query: 183 VGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNG 242
VG Y +G E+A++ FD++ E+N WN LL G+ E G ++E +R FD + P
Sbjct: 146 VGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE-----ARRVFDKI-PEK 199
Query: 243 VTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFE 302
+ L + S ++ + G +C L + N L+ Y C + A+ F+
Sbjct: 200 DAVSWNLIISSYAKKGDMG---NACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFD 256
Query: 303 AIPVENVISWNSLVSVNADNDLLCDALELFTVM-------------------------QL 337
A+P +N +SW +++S + A ELF +M +L
Sbjct: 257 AMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKL 316
Query: 338 WGQ--------SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDM 389
+ Q P +L ++++ S+ G + + + G + + S LID+
Sbjct: 317 FAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTS-LIDL 375
Query: 390 YGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTF 449
Y K D + +F +L K+ ++++ G + LF MI++ + P+ VTF
Sbjct: 376 YMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTF 435
Query: 450 STTLKALSVSASATFTSSQLLHCF-ALKS-GVEGDAAVACSLMDAYSRCGHVELSLQIFE 507
+ L A S S + CF ++K +E A ++D R G +E + ++ +
Sbjct: 436 TGLLSAYSHSGLV----QEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIK 491
Query: 508 TLS-SPNAICFTSMI 521
++ PNA + +++
Sbjct: 492 SMPMQPNAGVWGALL 506
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 151/353 (42%), Gaps = 26/353 (7%)
Query: 298 KKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRA 357
K+ + + SW LV + + + ++++ M G PS ++ +L +C +
Sbjct: 58 KRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 358 EEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSL 417
E + GK IH ALK G G V+ Q+ L+ +Y + IE + F+ + ++ NSL
Sbjct: 118 ENMVDGKPIHAQALKNGLC-GCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSL 176
Query: 418 MTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK--------------ALSVSASAT 463
+ G + +F + ++ + + S+ K L AS
Sbjct: 177 LHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWN 236
Query: 464 FTSSQLLHCFALK-------SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAIC 516
++C +K + + + +++ Y++ G V+ + ++F +S + +
Sbjct: 237 ILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV 296
Query: 517 FTSMINGYARNGMGKQGLAVLHAMVEKG--LKPDEITFLCALTGCNHTGMVKEGRILFDS 574
+ +MI Y +NG K L + M+E+ ++PDEIT ++ + G G + +S
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV-ES 355
Query: 575 MKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSC 627
+ HG++ D + ++DL + G +K+D +S+++ C
Sbjct: 356 YITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNL-NKKDTVSYSAMIMGC 407
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 228/456 (50%), Gaps = 7/456 (1%)
Query: 241 NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKS 300
N C LL + R +G +L ++K G + VAN L++FYS ++++
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPL-VANNLINFYSKSQLPFDSRRA 72
Query: 301 FEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
FE P ++ +W+S++S A N+L +LE M P L SC+
Sbjct: 73 FEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRC 132
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
+G+ +HC ++K G+D V S+L+DMY KC +I + +F+ + +R + + +M
Sbjct: 133 DIGRSVHCLSMKTGYD-ADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYG 191
Query: 421 LSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTS-SQLLHCFALKSGV 479
+ G ++ + LF + E L ++ +FS+ + SV A++T + +H ++KS
Sbjct: 192 YAQMGENEEALWLFKEALFENLAVNDYSFSSVI---SVCANSTLLELGRQIHGLSIKSSF 248
Query: 480 EGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHA 539
+ + V SL+ YS+CG E + Q+F + N + +M+ YA++ ++ + +
Sbjct: 249 DSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKR 308
Query: 540 MVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
M G+KP+ ITFL L C+H G+V EGR FD MK ++P +H++ +VD+L RAG
Sbjct: 309 MKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAG 367
Query: 600 XXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASN 659
P +W +LL SC HKN E+ AA + EL P + + SN
Sbjct: 368 RLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSN 427
Query: 660 FYAEIGNFDASREIREVALARKMTREIGHSSIEIRQ 695
YA G F+ + + R++ R +E G S +E R
Sbjct: 428 AYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERN 463
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 152/300 (50%), Gaps = 3/300 (1%)
Query: 122 PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGT 181
P +L +M +R S CA G VHC +K G+ ++VFVG +
Sbjct: 97 PWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSS 156
Query: 182 LVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPN 241
LV Y G AR++FDE+P+RN+ W+ ++ G+ ++G EE+L + F+ + N
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
+F ++ VC+N L G+++ + +S+ FV ++LV YS CG GA + F
Sbjct: 217 DYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275
Query: 302 EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
+PV+N+ WN+++ A + +ELF M+L G P+ + + +LN+CS A +
Sbjct: 276 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC-NSLMTS 420
G+ + +K E + ++L+DM G+ ++ ++ V ++ E +L+TS
Sbjct: 336 EGR-YYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 394
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 172/364 (47%), Gaps = 6/364 (1%)
Query: 147 VLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERN 206
+L AR+ +G+Q+H VVK G V L+ FY L +R F++ P+++
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 207 LAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQS 266
W+ ++ F + SL + +M + P+ K C+ R + G+ +
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 267 CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLC 326
+K G+ ++++FV ++LVD Y+ CG +V A+K F+ +P NV++W+ ++ A
Sbjct: 141 LSMKTGY-DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENE 199
Query: 327 DALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSAL 386
+AL LF + + S +++ C+ + + LG+QIH + S S+L
Sbjct: 200 EALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSSFVGSSL 258
Query: 387 IDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDE 446
+ +Y KC E + VF + + L N+++ + + TQ V+ELF M G+ P+
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 447 VTFSTTLKALSVSASATFTSSQLLHCFALK-SGVEGDAAVACSLMDAYSRCGHVELSLQI 505
+TF L L+ + A + +K S +E SL+D R G ++ +L++
Sbjct: 319 ITF---LNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEV 375
Query: 506 FETL 509
+
Sbjct: 376 ITNM 379
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 126/244 (51%), Gaps = 4/244 (1%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGL 134
V+ + +D + K ++ A +F MP R+ VT++ ++ + E+AL L+ E
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
+ +FSSV++VCA S G Q+H +K F S+ FVG +LV Y G+ E
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A ++F+E+P +NL +WN +L+ + + ++ + + RM G++PN +TF +L CS+
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVIS-WN 313
++EG+ +K +E +LVD G L A + +P++ S W
Sbjct: 331 AGLVDEGRYYFD-QMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 314 SLVS 317
+L++
Sbjct: 390 ALLT 393
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 236/508 (46%), Gaps = 38/508 (7%)
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGV-EPNGVTFCYLLKVCSNHR 256
+F+ +P +WN L++G+ E+++ RM G+ P+ TF ++KVCSN+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV 316
++ G + +L++GF + ++ V + VDFY C L A+K F +P N +SW +LV
Sbjct: 125 QVRVGSSVHGLVLRIGF-DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALV 183
Query: 317 SVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD 376
+ L +A +F +M ++ S L++ ++ ++ K++ FD
Sbjct: 184 VAYVKSGELEEAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKL--------FD 231
Query: 377 E---GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVEL 433
E + + +++ID Y K D+ S+ +FE + ++L+ + G + ++
Sbjct: 232 EMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKV 291
Query: 434 FGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEG----------DA 483
F M + + PDE + A S + CF L V+
Sbjct: 292 FSEMCAKNVKPDEFIMVGLMSACSQ-----------MGCFELCEKVDSYLHQRMNKFSSH 340
Query: 484 AVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEK 543
V +L+D ++CGH++ + ++FE + + + + SM+ G A +G G + + + MV++
Sbjct: 341 YVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE 400
Query: 544 GLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXX 603
G+ PDE+ F L C + +V+EG F+ M+ + + H+SC+V+LL R G
Sbjct: 401 GIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKE 460
Query: 604 XXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAE 663
P + W SLL C H N E+ A+ L EL+P ++ SN YA
Sbjct: 461 AYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAA 520
Query: 664 IGNFDASREIREVALARKMTREIGHSSI 691
+ + +R+ +T+ G S I
Sbjct: 521 LDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 173/359 (48%), Gaps = 12/359 (3%)
Query: 99 VFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGLLGI-RETSTTFSSVLAVCARSG 155
VF +P T +N LI + F + + + M G+ R TF V+ VC+ +G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 156 FHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLR 215
R G VH V++ GF +V VG + V FY AR++F E+PERN W L+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 216 GFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVE 275
+ + G +EE+ + + M E N ++ L+ L KKL + K
Sbjct: 185 AYVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPK----- 235
Query: 276 SNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVM 335
+I +++D Y+ G +V A+ FE +V +W++L+ A N +A ++F+ M
Sbjct: 236 RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD 395
P +VGL+++CS+ L +++ + + S + ALIDM KC
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGH 355
Query: 396 IESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
++ + +FE + +R L S+M ++ G + + LF M+DEG++PDEV F+ LK
Sbjct: 356 MDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILK 414
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 128/281 (45%), Gaps = 8/281 (2%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRETSTT 143
+D + K +DL SA VF MP R+ V++ L+ A+ E L M L +
Sbjct: 152 VDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGE--LEEAKSMFDLMPERNLGS 209
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
+++++ +SG ++ + K +S +++ Y G AR+LF+E
Sbjct: 210 WNALVDGLVKSGDLVNAKKLFDEMPKRDIISYT----SMIDGYAKGGDMVSARDLFEEAR 265
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKK 263
++ W+ L+ G+ + G E+ +S MC V+P+ L+ CS +K
Sbjct: 266 GVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEK 325
Query: 264 LQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADND 323
+ S + + S+ +V AL+D + CG + A K FE +P +++S+ S++ A +
Sbjct: 326 VDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHG 385
Query: 324 LLCDALELFTVMQLWGQSPSVRSLVGLLNSC--SRAEEIGL 362
+A+ LF M G P + +L C SR E GL
Sbjct: 386 CGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGL 426
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 141/569 (24%), Positives = 262/569 (46%), Gaps = 40/569 (7%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVG---LREVARELFDEL--------PERNLAVW 210
Q+H R++K G + N + +V + + L + AR +F E + +W
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFLW 89
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILK 270
N +++ ++L M +GV + + +LK CS + G ++ + K
Sbjct: 90 NAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKK 149
Query: 271 MGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALE 330
G + S++F+ N L+ Y CGCL +++ F+ +P + +S+NS++ L+ A E
Sbjct: 150 TG-LWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 331 LFTVMQLWGQS-PSVRSLVGLLNSCSRAEEI---------------------GLGKQIHC 368
LF +M + ++ S S++ S +I G K
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 268
Query: 369 HALKLGFD---EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG 425
K FD V + +ID Y K + + +F+ + R + NS+M
Sbjct: 269 EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK 328
Query: 426 ATQDVVELFGLMIDEG-LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAA 484
+ +E+F M E L+PD+ T L A ++ + + +H + ++
Sbjct: 329 YHMEALEIFSDMEKESHLLPDDTTLVIVLPA--IAQLGRLSKAIDMHLYIVEKQFYLGGK 386
Query: 485 VACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKG 544
+ +L+D YS+CG ++ ++ +FE + + + + +MI G A +G+G+ +L +
Sbjct: 387 LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLS 446
Query: 545 LKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXX 604
LKPD+ITF+ L C+H+G+VKEG + F+ M+ H ++P +H+ CMVD+L R+G
Sbjct: 447 LKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 506
Query: 605 XXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEI 664
+ P + + +W + L +C HK E G A+ L+ +P+ ++ SN YA
Sbjct: 507 KNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASF 566
Query: 665 GNFDASREIREVALARKMTREIGHSSIEI 693
G + R +R + RK+ + G S IE+
Sbjct: 567 GMWKDVRRVRTMMKERKIEKIPGCSWIEL 595
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 222/491 (45%), Gaps = 48/491 (9%)
Query: 122 PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGT 181
P QAL L M G+ + S VL C+R GF + G+Q+H + K G S++F+
Sbjct: 102 PRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNC 161
Query: 182 LVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCV------------------ 223
L+G YL G ++R++FD +P+R+ +N ++ G+ + G +
Sbjct: 162 LIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLI 221
Query: 224 ------------EESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKM 271
+ ++ S++ D E + +++ ++ H R+ + K L + +
Sbjct: 222 SWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPR- 280
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALEL 331
++ ++D Y+ G + AK F+ +P +V+++NS+++ N +ALE+
Sbjct: 281 ----RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEI 336
Query: 332 FTVMQLWGQ-SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMY 390
F+ M+ P +LV +L + ++ + +H + ++ F G ALIDMY
Sbjct: 337 FSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGG-KLGVALIDMY 395
Query: 391 GKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFS 450
KC I+ ++ VFE + ++++ N+++ L+ G + ++ + L PD++TF
Sbjct: 396 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFV 455
Query: 451 TTLKALSVSASATFTSSQLLHCFAL---KSGVEGDAAVACSLMDAYSRCGHVELSLQIFE 507
L A S S + L CF L K +E ++D SR G +EL+ + E
Sbjct: 456 GVLNACSHSGLV----KEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIE 511
Query: 508 TLS-SPNAICFTSMINGYARNGMGKQG-LAVLHAMVEKGLKPDEITFLCALTGCNHTGMV 565
+ PN + + + + + + + G L H +++ G P L + GM
Sbjct: 512 EMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYAS--FGMW 569
Query: 566 KEGRILFDSMK 576
K+ R + MK
Sbjct: 570 KDVRRVRTMMK 580
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 138/315 (43%), Gaps = 40/315 (12%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGL 134
++ +N I ++K L + +F MP RD+V+YN +I + C A L+ M +
Sbjct: 156 LFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPM 215
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
+ +++S+++ A++ +GV + ++ ++ +++ Y+ G E
Sbjct: 216 E--MKNLISWNSMISGYAQTS---DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIED 270
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM--------------------- 233
A+ LFD +P R++ W ++ G+ +LG V + + +M
Sbjct: 271 AKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYH 330
Query: 234 -----CFDGVE------PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVAN 282
F +E P+ T +L + RL++ + I++ F +
Sbjct: 331 MEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGK-LGV 389
Query: 283 ALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSP 342
AL+D YS CG + A FE I +++ WN+++ A + L A ++ ++ P
Sbjct: 390 ALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKP 449
Query: 343 SVRSLVGLLNSCSRA 357
+ VG+LN+CS +
Sbjct: 450 DDITFVGVLNACSHS 464
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 4/249 (1%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYG 130
P V T ID + K ++ A +F MP RD V YN +++ + +AL ++
Sbjct: 279 PRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFS 338
Query: 131 EMGLLG-IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNV 189
+M + TT VL A+ G + + +H +V+ F +G L+ Y
Sbjct: 339 DMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKC 398
Query: 190 GLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLL 249
G + A +F+ + +++ WN ++ G G E + + ++ ++P+ +TF +L
Sbjct: 399 GSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVL 458
Query: 250 KVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-N 308
CS+ + EG + + +E + +VD S G + AK E +PVE N
Sbjct: 459 NACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPN 518
Query: 309 VISWNSLVS 317
+ W + ++
Sbjct: 519 DVIWRTFLT 527
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 153/368 (41%), Gaps = 35/368 (9%)
Query: 247 YLLKVCSNHRRLNE--GKKLQSCILKMGFVESNIFVANA------LVDF-------YSAC 291
++L C +N+ G+ +++ I+K + + I +A A L DF Y C
Sbjct: 17 HVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVC 76
Query: 292 GCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLL 351
SF VE+ WN+++ ++ AL L +M G S SL +L
Sbjct: 77 --------SFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVL 128
Query: 352 NSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTL 411
+CSR + G QIH K G + Q+ LI +Y KC + S +F+ + KR
Sbjct: 129 KACSRLGFVKGGMQIHGFLKKTGL-WSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDS 187
Query: 412 ECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLH 471
NS++ CG ELF LM E M + +++++ + + ++ +S+L
Sbjct: 188 VSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFA 245
Query: 472 CFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGK 531
E D S++D Y + G +E + +F+ + + + + +MI+GYA+ G
Sbjct: 246 DMP-----EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVH 300
Query: 532 QGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCM 591
+ M + D + + + G E +F M+ + PD +
Sbjct: 301 HAKTLFDQMPHR----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIV 356
Query: 592 VDLLCRAG 599
+ + + G
Sbjct: 357 LPAIAQLG 364
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 206/406 (50%), Gaps = 11/406 (2%)
Query: 297 AKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ---SPSVRSLVGLLNS 353
A F++I + N +++++ + + + L F +M + +PS + L+ +
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 354 CSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLEC 413
C +A +GKQIHC +K G H Q+ ++ +Y + + + VF+ + + +
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 414 CNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCF 473
+ LM CG + +E+F M+ G+ PDE + +T L A + + +H F
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTA--CAQVGALAQGKWIHEF 243
Query: 474 ALKS-GVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQ 532
K +E D V +L+D Y++CG +E ++++FE L+ N + ++I GYA G K+
Sbjct: 244 VKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKK 303
Query: 533 GLAVLHAMV-EKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCM 591
L + E G+KPD + L L C H G ++EGR + ++M++ +G+ P H+SC+
Sbjct: 304 ATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCI 363
Query: 592 VDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDP--- 648
VDL+CRAG + P K +W +LL CR+HKN E+G A Q L++L+
Sbjct: 364 VDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNV 423
Query: 649 -DDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
++ A +Q SN Y + + ++R + R + + G S +E+
Sbjct: 424 EEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEV 469
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 167/348 (47%), Gaps = 17/348 (4%)
Query: 78 YTKNREIDAFIKSRDLNS----ALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMG 133
Y ++ + AF+ +LN A ++F ++ + ++ Y+ +I C Q HL
Sbjct: 44 YAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI-CSRSSQP-HLGLRYF 101
Query: 134 LLGIRE-------TSTTFSSVLAVCARSGFHREGVQVHCRVVKFG-FLSNVFVGGTLVGF 185
LL ++E + TF ++ C ++ F G Q+HC VVK G FLS+ V ++
Sbjct: 102 LLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRI 161
Query: 186 YLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTF 245
Y+ L AR++FDE+P+ ++ W+VL+ G+ G E L + M G+EP+ +
Sbjct: 162 YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSV 221
Query: 246 CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
L C+ L +GK + + K ++ES++FV ALVD Y+ CGC+ A + FE +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT 281
Query: 306 VENVISWNSLVSVNADNDLLCDALE-LFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGK 364
NV SW +L+ A A L + + G P L+G+L +C+ + G+
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 365 -QIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTL 411
+ + G H S ++D+ + ++ ++ + E + + L
Sbjct: 342 TMLENMEARYGITPKHEH-YSCIVDLMCRAGRLDDALDLIEKMPMKPL 388
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 152/362 (41%), Gaps = 47/362 (12%)
Query: 205 RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE-PNGVTFCYLLKVCSNHRR------ 257
RN + LL F L + + +Y S + FD +E PN + ++++CS +
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSI-FDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 258 --------------------------------LNEGKKLQSCILKMGFVESNIFVANALV 285
+ GK++ ++K G S+ V ++
Sbjct: 100 YFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVL 159
Query: 286 DFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVR 345
Y L A+K F+ IP +V+ W+ L++ L + LE+F M + G P
Sbjct: 160 RIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEF 219
Query: 346 SLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFES 405
S+ L +C++ + GK IH K + E V +AL+DMY KC IE++V VFE
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEK 279
Query: 406 LTKRTLECCNSLMTSLSHCG-ATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATF 464
LT+R + +L+ + G A + L + ++G+ PD V L L+ A F
Sbjct: 280 LTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVL---LGVLAACAHGGF 336
Query: 465 TSS--QLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMI 521
+L + G+ ++D R G ++ +L + E + P A + +++
Sbjct: 337 LEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALL 396
Query: 522 NG 523
NG
Sbjct: 397 NG 398
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 208/406 (51%), Gaps = 11/406 (2%)
Query: 297 AKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ---SPSVRSLVGLLNS 353
A F++I + N +++++ + + + L F +M + +PS + L+ +
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 354 CSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLEC 413
C +A +GKQIHC +K G H Q+ ++ +Y + + + VF+ + + +
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 414 CNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCF 473
+ LM CG + +E+F M+ +GL PDE + +T L A + + +H F
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTA--CAQVGALAQGKWIHEF 243
Query: 474 ALK-SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQ 532
K S +E D V +L+D Y++CG +E ++++F+ L+ N + ++I GYA G K+
Sbjct: 244 VKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKK 303
Query: 533 GLAVLHAMV-EKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCM 591
+ L + E G+KPD + L L C H G ++EGR + ++M++ + + P H+SC+
Sbjct: 304 AMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCI 363
Query: 592 VDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDP--- 648
VDL+CRAG + P K +W +LL CR+HKN E+G A + L++L+
Sbjct: 364 VDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNV 423
Query: 649 -DDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
++ A +Q SN Y + + ++R + R + + G S +E+
Sbjct: 424 EEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEV 469
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 169/348 (48%), Gaps = 17/348 (4%)
Query: 78 YTKNREIDAFIKSRDLNS----ALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMG 133
Y ++ + AF+ +LN A ++F ++ + ++ Y+ +I C Q HL
Sbjct: 44 YAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI-CSRSSQP-HLGLRYF 101
Query: 134 LLGIRE-------TSTTFSSVLAVCARSGFHREGVQVHCRVVKFG-FLSNVFVGGTLVGF 185
LL ++E + TF ++ C ++ F G Q+HC VVK G FLS+ V ++
Sbjct: 102 LLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRI 161
Query: 186 YLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTF 245
Y+ L AR++FDE+P+ ++ W+VL+ G+ G E L + M G+EP+ +
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 246 CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
L C+ L +GK + + K ++ES++FV ALVD Y+ CGC+ A + F+ +
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 306 VENVISWNSLVSVNADNDLLCDALELFTVMQLW-GQSPSVRSLVGLLNSCSRAEEIGLGK 364
NV SW +L+ A A+ ++ G P L+G+L +C+ + G+
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Query: 365 QIHCHALKLGFDEGSVHAQ-SALIDMYGKCSDIESSVAVFESLTKRTL 411
+ ++ ++ H S ++D+ + ++ ++ + E + + L
Sbjct: 342 SM-LENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPL 388
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 153/360 (42%), Gaps = 43/360 (11%)
Query: 205 RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE-PNGVTFCYLLKVCSNHRR------ 257
RN + LL F L + + +Y S + FD +E PN + ++++CS +
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSI-FDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 258 --------------------------------LNEGKKLQSCILKMGFVESNIFVANALV 285
+ GK++ ++K G S+ V ++
Sbjct: 100 YFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVL 159
Query: 286 DFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVR 345
Y L+ A+K F+ IP +V+ W+ L++ L + LE+F M + G P
Sbjct: 160 RIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEF 219
Query: 346 SLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFES 405
S+ L +C++ + GK IH K + E V +AL+DMY KC IE++V VF+
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKK 279
Query: 406 LTKRTLECCNSLMTSLSHCG-ATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATF 464
LT+R + +L+ + G A + + L L ++G+ PD V L A +
Sbjct: 280 LTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEE 339
Query: 465 TSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMING 523
S L + A +C ++D R G ++ +L + E + P A + +++NG
Sbjct: 340 GRSMLENMEARYEITPKHEHYSC-IVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 184/356 (51%), Gaps = 5/356 (1%)
Query: 339 GQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIES 398
G S L + SC + G HC ALK GF V+ S+L+ +Y ++E+
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFIS-DVYLGSSLVVLYRDSGEVEN 173
Query: 399 SVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSV 458
+ VFE + +R + ++++ + ++L+ M P++ TF+ L A
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA--C 231
Query: 459 SASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFT 518
+ S + +HC L G++ ++ SL+ Y +CG ++ + +IF+ S+ + + +
Sbjct: 232 TGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWN 291
Query: 519 SMINGYARNGMGKQGLAVLHAMVEK-GLKPDEITFLCALTGCNHTGMVKEGRILFDSMKS 577
SMI GYA++G+ Q + + M+ K G KPD IT+L L+ C H G+VKEGR F+ M
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE 351
Query: 578 VHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGT 637
HG++P+ H+SC+VDLL R G P K + +W SLL SCR H + G
Sbjct: 352 -HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Query: 638 RAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
RAA+ + L+PD A +Q +N YA +G + + +R++ + + G S IEI
Sbjct: 411 RAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEI 466
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 143/264 (54%), Gaps = 3/264 (1%)
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
SS + C + R G HC +K GF+S+V++G +LV Y + G E A ++F+E+P
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKK 263
ERN+ W ++ GF + V+ L YS+M +PN TF LL C+ L +G+
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRS 242
Query: 264 LQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADND 323
+ L MG ++S + ++N+L+ Y CG L A + F+ ++V+SWNS+++ A +
Sbjct: 243 VHCQTLHMG-LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHG 301
Query: 324 LLCDALELFTVMQ-LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHA 382
L A+ELF +M G P + +G+L+SC A + G++ + G + ++
Sbjct: 302 LAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGL-KPELNH 360
Query: 383 QSALIDMYGKCSDIESSVAVFESL 406
S L+D+ G+ ++ ++ + E++
Sbjct: 361 YSCLVDLLGRFGLLQEALELIENM 384
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 120/244 (49%), Gaps = 5/244 (2%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGL 134
VY + + + S ++ +A VF MP R+ V++ +IS + + + L LY +M
Sbjct: 155 VYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRK 214
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
TF+++L+ C SG +G VHC+ + G S + + +L+ Y G +
Sbjct: 215 STSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKD 274
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC-FDGVEPNGVTFCYLLKVCS 253
A +FD+ +++ WN ++ G+ + G +++ + M G +P+ +T+ +L C
Sbjct: 275 AFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCR 334
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISW 312
+ + EG+K + + + G ++ + + LVD G L A + E +P++ N + W
Sbjct: 335 HAGLVKEGRKFFNLMAEHG-LKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIW 393
Query: 313 NSLV 316
SL+
Sbjct: 394 GSLL 397
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 240/491 (48%), Gaps = 53/491 (10%)
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVES-NIFVANALVDFYSACGCLVGAKKSFEAIPV 306
LL+ C++ L GK+L + + G ++ +++NAL FY++ G +V A+K F+ IP+
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 307 --ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGK 364
++ + W +L+S + LL ++++LF M+ S+V L C++ E++G +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 365 QIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH- 423
Q H A+K+G SV +AL+DMYGKC + +FE L ++++ ++ ++
Sbjct: 132 QGHGVAVKMGVLT-SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 424 ------------------------------CGATQDVVELFGLMI---DEGLMPDEVTFS 450
G T++V+EL M+ GL F
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL-----NFV 245
Query: 451 TTLKALSVSA-SATFTSSQLLHCFALKS----GVEG---DAAVACSLMDAYSRCGHVELS 502
T LS A S + +H +ALK G E D V +L+D Y++CG+++ S
Sbjct: 246 TLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSS 305
Query: 503 LQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHT 562
+ +F + N + + ++ +G A +G G+ + + M+ + +KPD++TF L+ C+H+
Sbjct: 306 MNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHS 364
Query: 563 GMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSS 622
G+V EG F S++ +G++P H++CMVDLL RAG + P + + S
Sbjct: 365 GIVDEGWRCFHSLR-FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGS 423
Query: 623 LLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKM 682
LL SC H E+ R + L+++ P + + SN Y G D + +R R +
Sbjct: 424 LLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGI 483
Query: 683 TREIGHSSIEI 693
+ G SSI +
Sbjct: 484 RKIPGLSSIYV 494
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 188/423 (44%), Gaps = 51/423 (12%)
Query: 151 CARSGFHREGVQVHCRVVKFGF--LSNVFVGGTLVGFYLNVGLREVARELFDELP--ERN 206
CA F R G ++H + G ++ L FY + G A++LFDE+P E++
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKD 75
Query: 207 LAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQS 266
W LL F G + S+ + M VE + V+ L VC+ L ++
Sbjct: 76 NVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHG 135
Query: 267 CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI---------------------- 304
+KMG V +++ V NAL+D Y CG + K+ FE +
Sbjct: 136 VAVKMG-VLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLE 194
Query: 305 ---------PVENVISWNSLVSVNADNDLLCDALELFTVMQLW-GQSPSVRSLVGLLNSC 354
P N ++W +V+ + LEL M G + +L +L++C
Sbjct: 195 RGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSAC 254
Query: 355 SRAEEIGLGKQIHCHALKLGFDEG------SVHAQSALIDMYGKCSDIESSVAVFESLTK 408
+++ + +G+ +H +ALK G V +AL+DMY KC +I+SS+ VF + K
Sbjct: 255 AQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRK 314
Query: 409 RTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQ 468
R + N+L + L+ G + V+++F MI E + PD++TF+ L A S S +
Sbjct: 315 RNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSG----IVDE 369
Query: 469 LLHCF-ALK-SGVEGDAAVACSLMDAYSRCGHV-ELSLQIFETLSSPNAICFTSMINGYA 525
CF +L+ G+E ++D R G + E + + E PN + S++ +
Sbjct: 370 GWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429
Query: 526 RNG 528
+G
Sbjct: 430 VHG 432
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 161/383 (42%), Gaps = 50/383 (13%)
Query: 62 IRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPL--RDTVTYNLLISAWC 119
+ A TT+ + Y N + S ++ +A +F +PL +D V + L+S++
Sbjct: 28 LHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFS 87
Query: 120 FPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCARS---GFHREGVQVHCRVVKFGFLS 174
++ L+ EM + + + VCA+ GF ++G H VK G L+
Sbjct: 88 RYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQG---HGVAVKMGVLT 144
Query: 175 NVFVGGTLVGFYLNVGL-------------------------------REVARELFDELP 203
+V V L+ Y GL E RE+F E+P
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFD-GVEPNGVTFCYLLKVCSNHRRLNEGK 262
ERN W V++ G+ G E L + M F G N VT C +L C+ L G+
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 263 KLQSCILK----MGFVES--NIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV 316
+ LK MG S ++ V ALVD Y+ CG + + F + NV++WN+L
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALF 324
Query: 317 SVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD 376
S A + +++F M + P + +L++CS + + G + H+L+
Sbjct: 325 SGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCF-HSLRFYGL 382
Query: 377 EGSVHAQSALIDMYGKCSDIESS 399
E V + ++D+ G+ IE +
Sbjct: 383 EPKVDHYACMVDLLGRAGLIEEA 405
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLL-GIRET 140
+D +K L VFH MP R+ V + ++++ + + L L EM G
Sbjct: 184 LDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLN 243
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFL-------SNVFVGGTLVGFYLNVGLRE 193
T S+L+ CA+SG G VH +K + +V VG LV Y G +
Sbjct: 244 FVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNID 303
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
+ +F + +RN+ WN L G G ++ + +M + V+P+ +TF +L CS
Sbjct: 304 SSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACS 362
Query: 254 NHRRLNEGKKLQSCILKMGF--VESNIFVANALVDFYSACGCLVGAKKSFEAIPV 306
+ ++EG + C + F +E + +VD G + A+ +PV
Sbjct: 363 HSGIVDEGWR---CFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPV 414
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 257/541 (47%), Gaps = 45/541 (8%)
Query: 154 SGFHREGVQVHCRVVKFGFLS--NVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWN 211
SG+ G+ R + F +S NV LV Y+ + AR +F+ +PERN+ W
Sbjct: 56 SGYFSNGLPKEARQL-FDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWT 114
Query: 212 VLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKM 271
+++G+ + G V E+ + + RM E N V++ + + R+++ +KL +
Sbjct: 115 AMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK 170
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALEL 331
V S + + G + A+ F+ + NV++W ++++ N+ + A +L
Sbjct: 171 DVVASTNMIGGLCRE-----GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKL 225
Query: 332 FTVMQLWGQSPSVRSLVG--LLNSCSRAEE----IGLGKQIHCHALKLGFDEGSVHAQSA 385
F VM + L+G L AEE + + I C+A+ +GF
Sbjct: 226 FEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGF---------- 275
Query: 386 LIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPD 445
G+ +I + VF+ + R ++ + G + ++LF M +G+ P
Sbjct: 276 -----GEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP- 329
Query: 446 EVTFSTTLKALSVSAS-ATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQ 504
+F + + LSV A+ A+ + +H ++ + D VA LM Y +CG + +
Sbjct: 330 --SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 505 IFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGM 564
+F+ SS + I + S+I+GYA +G+G++ L + H M G P+++T + LT C++ G
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Query: 565 VKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
++EG +F+SM+S V P H+SC VD+L RAG K D +W +LL
Sbjct: 448 LEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Query: 625 RSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASR-EIREVALARKMT 683
+C++H ++ AA+ L E +PD+ Y + + +ASR + +VA+ RK
Sbjct: 508 GACKTHSRLDLAEVAAKKLFENEPDNAGT-------YVLLSSINASRSKWGDVAVVRKNM 560
Query: 684 R 684
R
Sbjct: 561 R 561
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 5/248 (2%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW---CFPPEQALHLY 129
P V N I F + +++ A VF M RD T+ +I A+ F E AL L+
Sbjct: 261 PMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELE-ALDLF 319
Query: 130 GEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNV 189
+M G+R + + S+L+VCA + G QVH +V+ F +V+V L+ Y+
Sbjct: 320 AQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKC 379
Query: 190 GLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLL 249
G A+ +FD +++ +WN ++ G+ G EE+L + M G PN VT +L
Sbjct: 380 GELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAIL 439
Query: 250 KVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-N 308
CS +L EG ++ + V + + VD G + A + E++ ++ +
Sbjct: 440 TACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPD 499
Query: 309 VISWNSLV 316
W +L+
Sbjct: 500 ATVWGALL 507
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 150/631 (23%), Positives = 262/631 (41%), Gaps = 81/631 (12%)
Query: 74 SDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMG 133
S C+ N + + K +L+ A F M RD + +N ++ A+C
Sbjct: 213 SSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYC-------------- 258
Query: 134 LLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE 193
++G H E V++ + K G + L+G Y +G +
Sbjct: 259 -------------------QNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD 299
Query: 194 VARELFDELPE----RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLL 249
A +L ++ ++ W ++ G G ++L+ + +M GV PN VT +
Sbjct: 300 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 250 KVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV 309
CS + +N+G ++ S +KMGF++ ++ V N+LVD YS CG L A+K F+++ ++V
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFID-DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 418
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCH 369
+WNS+++ A ELFT MQ P++ +
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW---------------------- 456
Query: 370 ALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTK-----RTLECCNSLMTSLSHC 424
+ +I Y K D ++ +F+ + K R N ++
Sbjct: 457 --------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 425 GATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAA 484
G + +ELF M MP+ VT + L A + A +H L+ ++ A
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE--IHGCVLRRNLDAIHA 560
Query: 485 VACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKG 544
V +L D Y++ G +E S IF + + + I + S+I GY +G LA+ + M +G
Sbjct: 561 VKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQG 620
Query: 545 LKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXX 604
+ P+ T + G V EG+ +F S+ + + + P H S MV L RA
Sbjct: 621 ITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEA 680
Query: 605 XXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEI 664
+ + + +W S L CR H + ++ AA+ L L+P++ A S YA
Sbjct: 681 LQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALG 740
Query: 665 GNFDASREIREVALARKMTREIGHSSIEIRQ 695
S E + + + +G S IE+R
Sbjct: 741 AKLGRSLEGNKPRRDNLLKKPLGQSWIEVRN 771
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 206/462 (44%), Gaps = 46/462 (9%)
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLS--NVFVGGTLVGFYLNVGLRE 193
G + +T+ +L C SG G +H R FG + +VFV L+ Y G
Sbjct: 76 GSKVKRSTYLKLLESCIDSGSIHLGRILHAR---FGLFTEPDVFVETKLLSMYAKCGCIA 132
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
AR++FD + ERNL W+ ++ + E + M DGV P+ F +L+ C+
Sbjct: 133 DARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCA 192
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWN 313
N + GK + S ++K+G + S + V+N+++ Y+ CG L A K F + +VI+WN
Sbjct: 193 NCGDVEAGKVIHSVVIKLG-MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWN 251
Query: 314 SLVSVNADNDLLCDALELFTVMQLWGQSPSVRS---LVGLLNSCSRAEEIGLGKQIHCHA 370
S++ N +A+EL M+ G SP + + L+G N + +
Sbjct: 252 SVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD------------ 299
Query: 371 LKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
A +D+ K + VF ++++ L H G
Sbjct: 300 --------------AAMDLMQKMETFGITADVF---------TWTAMISGLIHNGMRYQA 336
Query: 431 VELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLM 490
+++F M G++P+ VT + + A S +H A+K G D V SL+
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSA--CSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 491 DAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEI 550
D YS+CG +E + ++F+++ + + + SMI GY + G + + M + L+P+ I
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 551 TFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMV 592
T+ ++G G E LF M+ VQ + ++ ++
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII 496
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/556 (22%), Positives = 233/556 (41%), Gaps = 81/556 (14%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGL 134
V+ + + + + K + A VF +M R+ T++ +I A+ + L+ M
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
G+ F +L CA G G +H V+K G S + V +++ Y G +
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A + F + ER++ WN +L +C+ G EE++ M +G+ P
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISP-------------- 280
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV-ENVISWN 313
G V NI + + C + + E + +V +W
Sbjct: 281 -----------------GLVTWNILIGG--YNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Query: 314 SLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL 373
+++S N + AL++F M L G P+ +++ +++CS + I G ++H A+K+
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVEL 433
GF + V ++L+DMY KC +E + VF+S+ + + NS++T G EL
Sbjct: 382 GFID-DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 434 FGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAY 493
F M D L P+ +T++T + +K+G EG+A MD +
Sbjct: 441 FTRMQDANLRPNIITWNTMISGY------------------IKNGDEGEA------MDLF 476
Query: 494 SRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFL 553
R +E ++ ++ N I I GY +NG + L + M P+ +T L
Sbjct: 477 QR---MEKDGKVQRNTATWNLI-----IAGYIQNGKKDEALELFRKMQFSRFMPNSVTIL 528
Query: 554 CALTGCNH---TGMVKE--GRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXX 608
L C + MV+E G +L ++ ++H V+ + + D ++G
Sbjct: 529 SLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK------NALTDTYAKSGDIEYSRTIF 582
Query: 609 XQTPDKRDCFMWSSLL 624
+ +D W+SL+
Sbjct: 583 LGM-ETKDIITWNSLI 597
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 181/410 (44%), Gaps = 42/410 (10%)
Query: 217 FCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMG-FVE 275
C G + E+ + G + T+ LL+ C + ++ G+ L + + G F E
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTE 112
Query: 276 SNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVM 335
++FV L+ Y+ CGC+ A+K F+++ N+ +W++++ + + + +LF +M
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD 395
G P +L C+ ++ GK IH +KLG + ++++ +Y KC +
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGM-SSCLRVSNSILAVYAKCGE 231
Query: 396 IESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
++ + F + +R + NS++ + G ++ VEL M EG+ P VT++ +
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 456 LSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNA 514
+QL C DAA MD +Q ET + +
Sbjct: 292 Y----------NQLGKC---------DAA-----MDL----------MQKMETFGITADV 317
Query: 515 ICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDS 574
+T+MI+G NGM Q L + M G+ P+ +T + A++ C+ ++ +G + S
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH-S 376
Query: 575 MKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
+ G D + +VD+ + G +K D + W+S++
Sbjct: 377 IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK-DVYTWNSMI 425
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 196/384 (51%), Gaps = 13/384 (3%)
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
WN+++ ++ DA++++ M P SL ++ + + + LGK++H A+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVV 431
+LGF G +S I +Y K + E++ VF+ +R L N+++ L+H G + V
Sbjct: 145 RLGF-VGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 432 ELFGLMIDEGLMPDEVTFSTTLKALSVSAS----ATFTSSQLLHCFALKSGVE--GDAAV 485
E+F M GL PD+ T +SV+AS + + LH L++ E D +
Sbjct: 204 EMFVDMKRSGLEPDDFTM------VSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMM 257
Query: 486 ACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGL 545
SL+D Y +CG ++L+ IFE + N + ++SMI GYA NG + L M E G+
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGV 317
Query: 546 KPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXX 605
+P++ITF+ L+ C H G+V+EG+ F MKS ++P H+ C+VDLL R G
Sbjct: 318 RPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAK 377
Query: 606 XXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIG 665
+ P K + +W L+ C + E+ A +VEL+P + V++ +N YA G
Sbjct: 378 KVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRG 437
Query: 666 NFDASREIREVALARKMTREIGHS 689
+ +R++ +K+ + +S
Sbjct: 438 MWKDVERVRKLMKTKKVAKIPAYS 461
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 3/252 (1%)
Query: 160 GVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCE 219
G ++H V+ GF+ + F + Y G E AR++FDE PER L WN ++ G
Sbjct: 136 GKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNH 195
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVE-SNI 278
G E++ + M G+EP+ T + C L+ +L C+L+ E S+I
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 279 FVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLW 338
+ N+L+D Y CG + A FE + NV+SW+S++ A N +ALE F M+ +
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 339 GQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD-EGSVHAQSALIDMYGKCSDIE 397
G P+ + VG+L++C + GK + +K F+ E + ++D+ + ++
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKT-YFAMMKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 398 SSVAVFESLTKR 409
+ V E + +
Sbjct: 375 EAKKVVEEMPMK 386
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 163/355 (45%), Gaps = 14/355 (3%)
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
+ D+ P L WN ++R + +++ Y M V P+ + ++K
Sbjct: 75 ILDQYPIAFL--WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHD 132
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
GK+L S +++GFV + F + + Y G A+K F+ P + SWN+++
Sbjct: 133 FTLGKELHSVAVRLGFV-GDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIG 191
Query: 318 VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDE 377
+A+E+F M+ G P ++V + SC ++ L Q+H L+ +E
Sbjct: 192 GLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEE 251
Query: 378 GS-VHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGL 436
S + ++LIDMYGKC ++ + +FE + +R + +S++ + G T + +E F
Sbjct: 252 KSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQ 311
Query: 437 MIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE---GDAAVACSLMDAY 493
M + G+ P+++TF + LS + +KS E G + C ++D
Sbjct: 312 MREFGVRPNKITF---VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGC-IVDLL 367
Query: 494 SRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKP 547
SR G ++ + ++ E + PN + + ++ G + G + V MVE L+P
Sbjct: 368 SRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVE--LEP 420
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETS 141
I + K+ + +A VF P R ++N +I +A+ ++ +M G+
Sbjct: 159 ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD 218
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVV--KFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
T SV A C G Q+H V+ K S++ + +L+ Y G ++A +F
Sbjct: 219 FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIF 278
Query: 200 DELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLN 259
+E+ +RN+ W+ ++ G+ G E+L + +M GV PN +TF +L C + +
Sbjct: 279 EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVE 338
Query: 260 EGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
EGK + + +E + +VD S G L AKK E +P++ NV+ W L+
Sbjct: 339 EGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLM 396
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 229/482 (47%), Gaps = 47/482 (9%)
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSAC------GCLVGAKKSFE 302
L+ CS L K++ + +LK G ++ + A+ F S C L A+ F+
Sbjct: 21 LQRCSKQEEL---KQIHARMLKTGLMQDSY----AITKFLSFCISSTSSDFLPYAQIVFD 73
Query: 303 AIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
+ WN ++ + +D +L L+ M + + LL +CS
Sbjct: 74 GFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEE 133
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYG------------------------------- 391
QIH KLG+ E V+A ++LI+ Y
Sbjct: 134 TTQIHAQITKLGY-ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 392 KCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFST 451
K ++ ++ +F + ++ ++++ ++ ++LF M + + PD V+ +
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 452 TLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS 511
L A + + +H + K+ + D+ + C L+D Y++CG +E +L++F+ +
Sbjct: 253 ALSA--CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 512 PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRIL 571
+ +T++I+GYA +G G++ ++ M + G+KP+ ITF LT C++TG+V+EG+++
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 572 FDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHK 631
F SM+ + ++P H+ C+VDLL RAG + P K + +W +LL++CR HK
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 632 NEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSI 691
N E+G ++L+ +DP ++ +N +A +D + E R + + + + G S+I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 692 EI 693
+
Sbjct: 491 SL 492
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 184/409 (44%), Gaps = 44/409 (10%)
Query: 153 RSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE---VARELFDELPERNLAV 209
R E Q+H R++K G + + + + F ++ + A+ +FD + +
Sbjct: 23 RCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFL 82
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
WN+++RGF E SL Y RM N TF LLK CSN E ++ + I
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV----------------------- 306
K+G+ E++++ N+L++ Y+ G A F+ IP
Sbjct: 143 KLGY-ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIAL 201
Query: 307 --------ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAE 358
+N ISW +++S D+ +AL+LF MQ P SL L++C++
Sbjct: 202 TLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 261
Query: 359 EIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLM 418
+ GK IH + K SV LIDMY KC ++E ++ VF+++ K++++ +L+
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLG-CVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI 320
Query: 419 TSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSA---SATFTSSQLLHCFAL 475
+ ++ G ++ + F M G+ P+ +TF+ L A S + + + L
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380
Query: 476 KSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMING 523
K +E C ++D R G ++ + + + + PNA+ + +++
Sbjct: 381 KPTIE---HYGC-IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 34/307 (11%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGLLGIRETSTTFSSVLAV 150
L A VF DT +NL+I + PE++L LY M + TF S+L
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 151 CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVW 210
C+ E Q+H ++ K G+ ++V+ +L+ Y G ++A LFD +PE + W
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 211 NVLLRGFCELGCVE-------------------------------ESLNYYSRMCFDGVE 239
N +++G+ + G ++ E+L + M VE
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 240 PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKK 299
P+ V+ L C+ L +GK + S + K + + + L+D Y+ CG + A +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTR-IRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 300 SFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
F+ I ++V +W +L+S A + +A+ F MQ G P+V + +L +CS
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 360 IGLGKQI 366
+ GK I
Sbjct: 364 VEEGKLI 370
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYG 130
P D + N I ++K+ ++ AL +F M ++ +++ +IS + ++AL L+
Sbjct: 179 PDDVSW--NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
EM + + + ++ L+ CA+ G +G +H + K + +G L+ Y G
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCG 296
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
E A E+F + ++++ W L+ G+ G E+++ + M G++PN +TF +L
Sbjct: 297 EMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT 356
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NV 309
CS + EGK + + + ++ I +VD G L AK+ + +P++ N
Sbjct: 357 ACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNA 416
Query: 310 ISWNSLVS 317
+ W +L+
Sbjct: 417 VIWGALLK 424
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/576 (21%), Positives = 267/576 (46%), Gaps = 45/576 (7%)
Query: 161 VQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCEL 220
+Q+H R+V F + F+ L+ FY A +FDE+ RN +N LL +
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 221 GCVEES----LNYYSRMCF--DGVEPNGVTFCYLLKV---CSNHRRLNEGKKLQSCILKM 271
++ L++ C+ D P+ ++ +LK C + + +++ +++
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALEL 331
GF +S++FV N ++ +Y+ C + A+K F+ + +V+SWNS++S + + D ++
Sbjct: 162 GF-DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 332 FTVMQLWGQ-SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMY 390
+ M P+ +++ + +C ++ ++ G ++H ++ + + +A+I Y
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE-NHIQMDLSLCNAVIGFY 279
Query: 391 GKCSDIESSVAVFESLTKRT-------------------------------LECCNSLMT 419
KC ++ + A+F+ ++++ L N++++
Sbjct: 280 AKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMIS 339
Query: 420 SLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGV 479
L ++V+ F MI G P+ VT S+ L +L+ S++ + +H FA+++G
Sbjct: 340 GLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSN--LKGGKEIHAFAIRNGA 397
Query: 480 EGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHA 539
+ + V S++D Y++ G + + ++F+ + I +T++I YA +G ++
Sbjct: 398 DNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQ 457
Query: 540 MVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
M G KPD++T L+ H+G + +FDSM + + ++P H++CMV +L RAG
Sbjct: 458 MQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAG 517
Query: 600 XXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASN 659
+ P +W +LL + E+ A L E++P++ + +N
Sbjct: 518 KLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMAN 577
Query: 660 FYAEIGNFDASREIREVALARKMTREIGHSSIEIRQ 695
Y + G ++ + +R + + G S IE +
Sbjct: 578 LYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEK 613
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 160/359 (44%), Gaps = 44/359 (12%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEM-G 133
V+ N I + K ++ SA VF M RD V++N +IS + E +Y M
Sbjct: 167 VFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLA 226
Query: 134 LLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE 193
+ T SV C +S G++VH ++++ ++ + ++GFY G +
Sbjct: 227 CSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLD 286
Query: 194 VARELFDELPERN-------------------------------LAVWNVLLRGFCELGC 222
AR LFDE+ E++ L+ WN ++ G +
Sbjct: 287 YARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNH 346
Query: 223 VEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVAN 282
EE +N + M G PN VT LL + L GK++ + ++ G ++NI+V
Sbjct: 347 HEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG-ADNNIYVTT 405
Query: 283 ALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS---VNADNDLLCDALELFTVMQLWG 339
+++D Y+ G L+GA++ F+ ++I+W ++++ V+ D+D C LF MQ G
Sbjct: 406 SIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC---SLFDQMQCLG 462
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL-KLGFDEGSVHA--QSALIDMYGKCSD 395
P +L +L++ + + + + + I L K + G H +++ GK SD
Sbjct: 463 TKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSD 521
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 115/271 (42%), Gaps = 34/271 (12%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEM------ 132
N I + K L+ A A+F M +D+VTY +IS + ++A+ L+ EM
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 133 -------GLL------------------GIRETSTTFSSVLAVCARSGFHREGVQVHCRV 167
GL+ G R + T SS+L S + G ++H
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 168 VKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESL 227
++ G +N++V +++ Y +G A+ +FD +R+L W ++ + G + +
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 228 NYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDF 287
+ + +M G +P+ VT +L ++ + + + +L +E + +V
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 288 YSACGCLVGAKKSFEAIPVENVIS-WNSLVS 317
S G L A + +P++ + W +L++
Sbjct: 513 LSRAGKLSDAMEFISKMPIDPIAKVWGALLN 543
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 197/387 (50%), Gaps = 9/387 (2%)
Query: 311 SWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
+WN L + +D +++ +++ M+ G P+ + LL +C+ + G+QI
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 371 LKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
LK GFD V+ + LI +YG C + VF+ +T+R + NS+MT+L G V
Sbjct: 140 LKHGFD-FDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 431 VELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLM 490
E F MI + PDE TT+ L + + +L+H + +E + + +L+
Sbjct: 199 FECFCEMIGKRFCPDE----TTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 491 DAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMV-EKGLKPDE 549
D Y++ G +E + +FE + N +++MI G A+ G ++ L + M+ E ++P+
Sbjct: 255 DMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNY 314
Query: 550 ITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXX 609
+TFL L C+HTG+V +G F M+ +H ++P H+ MVD+L RAG
Sbjct: 315 VTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIK 374
Query: 610 QTPDKRDCFMWSSLLRSCRSHKNEE---VGTRAAQVLVELDPDDPAVWLQASNFYAEIGN 666
+ P + D +W +LL +C H +E+ +G + + L+EL+P + +N +AE
Sbjct: 375 KMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARM 434
Query: 667 FDASREIREVALARKMTREIGHSSIEI 693
+ + E+R V KM + G S +E+
Sbjct: 435 WAEAAEVRRVMKETKMKKIAGESCLEL 461
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 17/316 (5%)
Query: 88 IKSRDLNSALAVFHTMPLRDT----VTYNLLISAWCFP--PEQALHLYGEMGLLGIRETS 141
+ S L LA T+ L + T+N+L + P +++ +Y EM GI+
Sbjct: 54 VSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNK 113
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
TF +L CA G Q+ V+K GF +V+VG L+ Y AR++FDE
Sbjct: 114 LTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDE 173
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+ ERN+ WN ++ E G + + M P+ T LL C + L+ G
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGN--LSLG 231
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
K + S ++ + +E N + ALVD Y+ G L A+ FE + +NV +W++++ A
Sbjct: 232 KLVHSQVM-VRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQ 290
Query: 322 NDLLCDALELFT-VMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSV 380
+AL+LF+ +M+ P+ + +G+L +CS + G + + H ++ +
Sbjct: 291 YGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYK-YFHEME------KI 343
Query: 381 HAQSALIDMYGKCSDI 396
H ++ YG DI
Sbjct: 344 HKIKPMMIHYGAMVDI 359
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 9/254 (3%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLG 136
VY N I + + + A VF M R+ V++N +++A + L ++G
Sbjct: 148 VYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIG 207
Query: 137 IR--ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
R TT +L+ C G G VH +V+ N +G LV Y G E
Sbjct: 208 KRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEY 265
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVCS 253
AR +F+ + ++N+ W+ ++ G + G EE+L +S+M + V PN VTF +L CS
Sbjct: 266 ARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACS 325
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISW 312
+ +++G K + K+ ++ + A+VD G L A + +P E + + W
Sbjct: 326 HTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVW 385
Query: 313 NSLV---SVNADND 323
+L+ S++ D D
Sbjct: 386 RTLLSACSIHHDED 399
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 203/421 (48%), Gaps = 44/421 (10%)
Query: 274 VESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFT 333
VE N+ + ++++ Y LV A++ F+ P +++ WN+++S + + +A LF
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLF- 113
Query: 334 VMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKC 393
Q+ C V + + +++ Y
Sbjct: 114 ------------------------------DQMPCR---------DVMSWNTVLEGYANI 134
Query: 394 SDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG-LMPDEVTFSTT 452
D+E+ VF+ + +R + N L+ + G +V+ F M+DEG ++P++ T +
Sbjct: 135 GDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLV 194
Query: 453 LKALSVSASATFTSSQLLHCFALKSGVEG-DAAVACSLMDAYSRCGHVELSLQIFETLSS 511
L A + F + +H + G D V +L+D Y +CG +E+++++F+ +
Sbjct: 195 LSA--CAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR 252
Query: 512 PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRIL 571
+ I + +MING A +G G + L + H M G+ PD++TF+ L C H G+V++G
Sbjct: 253 RDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAY 312
Query: 572 FDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHK 631
F+SM + + P+ H C+VDLL RAG + P K D +W++LL + + +K
Sbjct: 313 FNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYK 372
Query: 632 NEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSI 691
++G A + L++L+P +PA ++ SN Y + G FD + ++ +E G S I
Sbjct: 373 KVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWI 432
Query: 692 E 692
E
Sbjct: 433 E 433
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 189/469 (40%), Gaps = 112/469 (23%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRETSTT 143
I+ ++ ++DL SA F P RD V +N +IS Y EMG +
Sbjct: 66 INGYLLNKDLVSARRYFDLSPERDIVLWNTMISG-----------YIEMGNM-------- 106
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
+ ARS F Q+ CR +V T++ Y N+G E +FD++P
Sbjct: 107 ------LEARSLFD----QMPCR--------DVMSWNTVLEGYANIGDMEACERVFDDMP 148
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLLKVCSNHRRLNEGK 262
ERN+ WN L++G+ + G V E L + RM +G V PN T +L C+ + GK
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 263 KLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADN 322
+ +G+ + ++ V NAL+D Y CG + A + F+ I ++ISWN++++ A +
Sbjct: 209 WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAH 268
Query: 323 DLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHA 382
+AL LF M+ G SP + VG+L +C + +GL
Sbjct: 269 GHGTEALNLFHEMKNSGISPDKVTFVGVLCAC---KHMGL-------------------- 305
Query: 383 QSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGL 442
+E +A F S+ S+M + HCG D L+ G
Sbjct: 306 -------------VEDGLAYFNSMFTDF-----SIMPEIEHCGCVVD------LLSRAGF 341
Query: 443 MPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDA---YSRCGHV 499
+ V F K V+ DA + +L+ A Y +
Sbjct: 342 LTQAVEFIN------------------------KMPVKADAVIWATLLGASKVYKKVDIG 377
Query: 500 ELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPD 548
E++L+ L N F + N Y G + AM + G K +
Sbjct: 378 EVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKE 426
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 5/249 (2%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYG 130
P V + N ++ + D+ + VF MP R+ ++N LI + + L +
Sbjct: 117 PCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFK 176
Query: 131 EMGLLG-IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLS-NVFVGGTLVGFYLN 188
M G + T + VL+ CA+ G G VH G+ +V V L+ Y
Sbjct: 177 RMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGK 236
Query: 189 VGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
G E+A E+F + R+L WN ++ G G E+LN + M G+ P+ VTF +
Sbjct: 237 CGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGV 296
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE- 307
L C + + +G + + + I +VD S G L A + +PV+
Sbjct: 297 LCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKA 356
Query: 308 NVISWNSLV 316
+ + W +L+
Sbjct: 357 DAVIWATLL 365
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 225/492 (45%), Gaps = 50/492 (10%)
Query: 247 YLLKVCSNHRRLNE--GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKS---- 300
YLLK+C + L++ + + S + F ++++F AN L S +K+
Sbjct: 9 YLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVF-ANVLFAITSISPSASASKEVVSYA 67
Query: 301 ---FEAIPVENVISWNSLVSV-NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSR 356
F I + +N+++ + + F M+ P + + +C+
Sbjct: 68 TSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAA 127
Query: 357 AE--EIGLGKQIHCHALKLG---------------------------FDEG---SVHAQS 384
+ ++ L K +HC AL+ G FDE V +
Sbjct: 128 KKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYN 187
Query: 385 ALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMP 444
LID K +I + +F+S+ R L NSL++ + ++ ++LF M+ GL P
Sbjct: 188 VLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKP 247
Query: 445 DEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQ 504
D V +TL A + S + + +H + + + D+ +A L+D Y++CG ++ +++
Sbjct: 248 DNVAIVSTLSA--CAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAME 305
Query: 505 IFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGM 564
IFE S + +MI G A +G G+ + MV G+KPD +TF+ L GC+H+G+
Sbjct: 306 IFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGL 365
Query: 565 VKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTP----DKRDCFMW 620
V E R LFD M+S++ V + +H+ CM DLL RAG Q P ++ W
Sbjct: 366 VDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 621 SSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVA-LA 679
S LL CR H N E+ +AA + L P+D V+ YA ++ ++RE+
Sbjct: 426 SGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRD 485
Query: 680 RKMTREIGHSSI 691
+K+ + +G S +
Sbjct: 486 KKVKKNVGFSKV 497
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 127/252 (50%), Gaps = 7/252 (2%)
Query: 72 NPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLY 129
NP V T N ID +K+R++ A +F +MPLRD V++N LIS + +A+ L+
Sbjct: 178 NPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLF 237
Query: 130 GEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNV 189
EM LG++ + S L+ CA+SG ++G +H + + F+ LV FY
Sbjct: 238 DEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKC 297
Query: 190 GLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLL 249
G + A E+F+ ++ L WN ++ G G E +++Y+ +M G++P+GVTF +L
Sbjct: 298 GFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVL 357
Query: 250 KVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV--- 306
CS+ ++E + L + + V + + D G + A + E +P
Sbjct: 358 VGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGG 417
Query: 307 --ENVISWNSLV 316
E +++W+ L+
Sbjct: 418 NREKLLAWSGLL 429
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 149/353 (42%), Gaps = 45/353 (12%)
Query: 96 ALAVFHTMPLRDTVTYNLLISAWCFPPEQAL---HLYGEMGLLGIRETSTTFSSVLAVCA 152
A +VF + T +N +I +L + EM + TF V CA
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 153 --RSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFY-----------------------L 187
++G +HC+ ++FG LS++F TL+ Y
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTY 186
Query: 188 NV---GL---REV--ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE 239
NV GL RE+ ARELFD +P R+L WN L+ G+ ++ E++ + M G++
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 240 PNGVTFCYLLKVCSNHRRLNEGKKLQSCI-LKMGFVESNIFVANALVDFYSACGCLVGAK 298
P+ V L C+ +GK + K F++S F+A LVDFY+ CG + A
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDS--FLATGLVDFYAKCGFIDTAM 304
Query: 299 KSFEAIPVENVISWNSLVS---VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCS 355
+ FE + + +WN++++ ++ + +L D F M G P + + +L CS
Sbjct: 305 EIFELCSDKTLFTWNAMITGLAMHGNGELTVD---YFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 356 RAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTK 408
+ + + + L + + D+ G+ IE + + E + K
Sbjct: 362 HSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPK 414
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/583 (25%), Positives = 260/583 (44%), Gaps = 55/583 (9%)
Query: 125 ALHLYGEMGLL---------GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSN 175
AL +G +G+L G + ++ +L V G+ Q+H V K GF+SN
Sbjct: 30 ALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSN 89
Query: 176 VFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCF 235
+ +L+ FY E A ++FDE+P+ ++ WN L+ G+ + G +E + + +
Sbjct: 90 TRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHR 149
Query: 236 DGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLV 295
V PN +F L C+ G + S ++K+G + N+ V N L+D Y CG +
Sbjct: 150 SDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMD 209
Query: 296 GAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCS 355
A F+ + ++ +SWN++V+ SCS
Sbjct: 210 DAVLVFQHMEEKDTVSWNAIVA-----------------------------------SCS 234
Query: 356 RAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCN 415
R ++ LG H + + LID + K D ++ V + N
Sbjct: 235 RNGKLELGLWFF-HQMP----NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWN 289
Query: 416 SLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFAL 475
+++T + + + E F M G+ DE + S L A++ A + S L+H A
Sbjct: 290 TILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGS--LIHACAH 347
Query: 476 KSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLA 535
K G++ VA +L+D YS+CG ++ + +F T+ N I + MI+GYARNG + +
Sbjct: 348 KLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIK 407
Query: 536 VLHAMV-EKGLKPDEITFLCALTGCNHTGMVKEGRI-LFDSMKSVHGVQPDQRHFSCMVD 593
+ + + E+ LKPD TFL L C+H + E + F+ M + + ++P H ++
Sbjct: 408 LFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIR 467
Query: 594 LLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVEL-DPD-DP 651
+ + G + D W +LL +C + K+ + A ++EL D D D
Sbjct: 468 AMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDE 527
Query: 652 AVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
+++ SN YA + +IR++ + +E+G S I+ R
Sbjct: 528 YLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSR 570
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 151/343 (44%), Gaps = 43/343 (12%)
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
W+ ++ G + L + DG +P+ +LL+V N+ ++ ++L +
Sbjct: 24 WSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
K GFV SN ++N+L+ FY L A K F+ +P +VISWNSLVS + + +
Sbjct: 83 KHGFV-SNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDM 389
LF + P+ S L +C+R LG IH +KLG ++G+V + LIDM
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 390 YGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTF 449
YGKC ++ +V VF+ + ++ N+++ S S G + + F M + PD VT+
Sbjct: 202 YGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTY 257
Query: 450 STTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL 509
+ L+DA+ + G + Q+ +
Sbjct: 258 N-------------------------------------ELIDAFVKSGDFNNAFQVLSDM 280
Query: 510 SSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
+PN+ + +++ GY + + M G++ DE +
Sbjct: 281 PNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSL 323
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 200/477 (41%), Gaps = 54/477 (11%)
Query: 87 FIKSRD-LNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTT 143
F K+ D L A VF MP D +++N L+S + ++ + L+ E+ + +
Sbjct: 99 FYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFS 158
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGF-LSNVFVGGTLVGFYLNVGLREVARELFDEL 202
F++ LA CAR G +H ++VK G NV VG L+ Y G + A +F +
Sbjct: 159 FTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHM 218
Query: 203 PERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGK 262
E++ WN ++ G +E L ++ +M PN T Y
Sbjct: 219 EEKDTVSWNAIVASCSRNGKLELGLWFFHQM------PNPDTVTY--------------- 257
Query: 263 KLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADN 322
N L+D + G A + +P N SWN++++ ++
Sbjct: 258 -------------------NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNS 298
Query: 323 DLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHA 382
+ +A E FT M G SL +L + + + G IH A KLG D V A
Sbjct: 299 EKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVA 358
Query: 383 QSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG- 441
SALIDMY KC ++ + +F ++ ++ L N +++ + G + + ++LF + E
Sbjct: 359 -SALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERF 417
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFAL---KSGVEGDAAVACSLMDAYSRCGH 498
L PD TF L L+V + +L F + + ++ CSL+ A + G
Sbjct: 418 LKPDRFTF---LNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGE 474
Query: 499 VELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKG-LKPDEITFL 553
V + Q+ + + + + +++ + K V M+E G DE ++
Sbjct: 475 VWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYI 531
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Query: 72 NPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLY 129
NP Y N IDAF+KS D N+A V MP ++ ++N +++ + + +A +
Sbjct: 251 NPDTVTY--NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFF 308
Query: 130 GEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNV 189
+M G+R + S VLA A G +H K G S V V L+ Y
Sbjct: 309 TKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKC 368
Query: 190 GLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYL 248
G+ + A +F +P +NL VWN ++ G+ G E++ ++++ + ++P+ TF L
Sbjct: 369 GMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNL 428
Query: 249 LKVCSN 254
L VCS+
Sbjct: 429 LAVCSH 434
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 181/337 (53%), Gaps = 6/337 (1%)
Query: 359 EIGLGKQIHCHALKLGFDEGS-VHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSL 417
++ LG+ IH ++ GF GS ++ Q++L+ +Y C D+ S+ VF+ + ++ L NS+
Sbjct: 3 DVRLGETIHSVVIRSGF--GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 418 MTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS 477
+ + G ++ + L+ M +G+ PD T + L A + + T + +H + +K
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL--GKRVHVYMIKV 118
Query: 478 GVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVL 537
G+ + + L+D Y+RCG VE + +F+ + N++ +TS+I G A NG GK+ + +
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 538 HAMVE-KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLC 596
M +GL P EITF+ L C+H GMVKEG F M+ + ++P HF CMVDLL
Sbjct: 179 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 238
Query: 597 RAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQ 656
RAG P + + +W +LL +C H + ++ A +++L+P+ ++
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 298
Query: 657 ASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
SN YA + ++IR+ L + + GHS +E+
Sbjct: 299 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 335
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 119/220 (54%), Gaps = 13/220 (5%)
Query: 158 REGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGF 217
R G +H V++ GF S ++V +L+ Y N G A ++FD++PE++L WN ++ GF
Sbjct: 5 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 218 CELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESN 277
E G EE+L Y+ M G++P+G T LL C+ L GK++ ++K+G N
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR-N 123
Query: 278 IFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ- 336
+ +N L+D Y+ CG + AK F+ + +N +SW SL+ A N +A+ELF M+
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 337 LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD 376
G P + VG+L +CS HC +K GF+
Sbjct: 184 TEGLLPCEITFVGILYACS-----------HCGMVKEGFE 212
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 129/255 (50%), Gaps = 7/255 (2%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALHLYGEMGL 134
+Y +N + + D+ SA VF MP +D V +N +I+ + PE+AL LY EM
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
GI+ T S+L+ CA+ G G +VH ++K G N+ L+ Y G E
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM-CFDGVEPNGVTFCYLLKVCS 253
A+ LFDE+ ++N W L+ G G +E++ + M +G+ P +TF +L CS
Sbjct: 143 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 202
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISW 312
+ + EG + + + +E I +VD + G + A + +++P++ NV+ W
Sbjct: 203 HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIW 262
Query: 313 NSLV---SVNADNDL 324
+L+ +V+ D+DL
Sbjct: 263 RTLLGACTVHGDSDL 277
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 207/422 (49%), Gaps = 12/422 (2%)
Query: 275 ESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTV 334
E + F N ++ Y A+ F+ +P ++ SWN++++ A + A ELF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 335 MQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
M + S +++ C E+ H K+ G V A +A+I Y K
Sbjct: 181 M-MEKNEVSWNAMISGYIECGDLEKAS-------HFFKVAPVRGVV-AWTAMITGYMKAK 231
Query: 395 DIESSVAVFESLT-KRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL 453
+E + A+F+ +T + L N++++ +D ++LF M++EG+ P+ S+ L
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 454 KALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPN 513
L S + + +H KS + D SL+ Y +CG + + ++FE + +
Sbjct: 292 --LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD 349
Query: 514 AICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFD 573
+ + +MI+GYA++G + L + M++ ++PD ITF+ L CNH G+V G F+
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 574 SMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNE 633
SM + V+P H++CMVDLL RAG P + ++ +LL +CR HKN
Sbjct: 410 SMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNV 469
Query: 634 EVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
E+ AA+ L++L+ + A ++Q +N YA ++ +R+ + + G+S IEI
Sbjct: 470 ELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEI 529
Query: 694 RQ 695
R
Sbjct: 530 RN 531
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 194/466 (41%), Gaps = 56/466 (12%)
Query: 61 FIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCF 120
+R+ T P + D ++ N+ I ++S D++ AL VFH M ++T+T+N L+
Sbjct: 46 LVRSDYLTKPSD-QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISK 104
Query: 121 PPE---QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVF 177
P +A L+ E I E T +++ C + E Q + F +
Sbjct: 105 DPSRMMEAHQLFDE-----IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPF---KDAA 156
Query: 178 VGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG 237
T++ Y G E ARELF + E+N WN ++ G+ E G +E++ +++ G
Sbjct: 157 SWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG 216
Query: 238 VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGA 297
V A++ Y + A
Sbjct: 217 V----------------------------------------VAWTAMITGYMKAKKVELA 236
Query: 298 KKSFEAIPV-ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSR 356
+ F+ + V +N+++WN+++S +N D L+LF M G P+ L L CS
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 357 AEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNS 416
+ LG+QIH K V A ++LI MY KC ++ + +FE + K+ + N+
Sbjct: 297 LSALQLGRQIHQIVSKSTLC-NDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNA 355
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
+++ + G + LF MID + PD +TF L A + A
Sbjct: 356 MISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACN-HAGLVNIGMAYFESMVRD 414
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMI 521
VE ++D R G +E +L++ ++ P+A F +++
Sbjct: 415 YKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLL 460
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 211/433 (48%), Gaps = 6/433 (1%)
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
KK+ + +L+ GF E N + L + G + A++ F+ + + WN+L
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLV-VIGDMCYARQVFDEMHKPRIFLWNTLFKGYVR 86
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
N L ++L L+ M+ G P + ++ + S+ + G +H H +K GF +
Sbjct: 87 NQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
A + L+ MY K ++ S+ +FES+ + L N+ + G + +E F M +
Sbjct: 147 A-TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVEL 501
+ D T + L A S + ++ A K ++ + V + +D + +CG+ E
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEI--GEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 502 SLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNH 561
+ +FE + N + +++MI GYA NG ++ L + M +GL+P+ +TFL L+ C+H
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 562 TGMVKEGRILFDSM--KSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFM 619
G+V EG+ F M + ++P + H++CMVDLL R+G + P + D +
Sbjct: 324 AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 620 WSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALA 679
W +LL +C H++ +G + A VLVE PD + + SN YA G +D ++R
Sbjct: 384 WGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRK 443
Query: 680 RKMTREIGHSSIE 692
+ +SS+E
Sbjct: 444 LGTKKVAAYSSVE 456
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 132/276 (47%), Gaps = 3/276 (1%)
Query: 92 DLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETSTTFSSVLA 149
D+ A VF M +N L + P ++L LY +M LG+R T+ V+
Sbjct: 58 DMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVK 117
Query: 150 VCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAV 209
++ G G +H VVK+GF V LV Y+ G A LF+ + ++L
Sbjct: 118 AISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVA 177
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
WN L + G +L Y+++MC D V+ + T +L C L G+++
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRAR 237
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
K ++ NI V NA +D + CG A+ FE + NV+SW++++ A N +AL
Sbjct: 238 KEE-IDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ 365
LFT MQ G P+ + +G+L++CS A + GK+
Sbjct: 297 TLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKR 332
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 154/296 (52%), Gaps = 2/296 (0%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
++H V++ GF + L+ + +G AR++FDE+ + + +WN L +G+
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 222 CVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVA 281
ESL Y +M GV P+ T+ +++K S + G L + ++K GF I VA
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI-VA 147
Query: 282 NALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQS 341
LV Y G L A+ FE++ V+++++WN+ ++V ALE F M
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 342 PSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVA 401
++V +L++C + + +G++I+ A K D ++ ++A +DM+ KC + E++
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID-CNIIVENARLDMHLKCGNTEAARV 266
Query: 402 VFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALS 457
+FE + +R + ++++ + G +++ + LF M +EGL P+ VTF L A S
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 117/236 (49%), Gaps = 7/236 (2%)
Query: 87 FIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQ---ALHLYGEMGLLGIRETSTT 143
++K +L+SA +F +M ++D V +N + A C AL + +M ++ S T
Sbjct: 154 YMKFGELSSAEFLFESMQVKDLVAWNAFL-AVCVQTGNSAIALEYFNKMCADAVQFDSFT 212
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
S+L+ C + G G +++ R K N+ V + +L G E AR LF+E+
Sbjct: 213 VVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK 272
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKK 263
+RN+ W+ ++ G+ G E+L ++ M +G+ PN VTF +L CS+ +NEGK+
Sbjct: 273 QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKR 332
Query: 264 LQSCILKMG--FVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
S +++ +E +VD G L A + + +PVE + W +L+
Sbjct: 333 YFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 186/353 (52%), Gaps = 18/353 (5%)
Query: 349 GLLNS-CSRAEEIGLGKQIHCHALKLGFDEGS---VHAQSALIDMYGKCSDIESSVAVFE 404
LL+S S I L +Q+ FDE S V + +A++ Y + DI ++VA+FE
Sbjct: 166 ALLHSYASSVSHITLARQL--------FDEMSERNVVSWTAMLSGYARSGDISNAVALFE 217
Query: 405 SLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDE-GLMPDEVTFSTTLKALSVSASAT 463
+ +R + N+++ + + G + V LF MI+E + P+EVT L A + + T
Sbjct: 218 DMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSA--CAQTGT 275
Query: 464 FTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMING 523
++ +H FA + + D V+ SL+D Y +CG++E + +F+ S + + SMIN
Sbjct: 276 LQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINC 335
Query: 524 YARNGMGKQGLAVLHAMVE---KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHG 580
+A +G ++ +AV M++ +KPD ITF+ L C H G+V +GR FD M + G
Sbjct: 336 FALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFG 395
Query: 581 VQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAA 640
++P H+ C++DLL RAG K D +W SLL +C+ H + ++ A
Sbjct: 396 IEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAV 455
Query: 641 QVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
+ LV L+P++ +N Y E+GN++ +R R++ + + G S IEI
Sbjct: 456 KNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEI 508
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 114/244 (46%), Gaps = 7/244 (2%)
Query: 175 NVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC 234
NV ++ Y G A LF+++PER++ WN +L + G E+++ + RM
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 235 FD-GVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGC 293
+ + PN VT +L C+ L K + + + + S++FV+N+LVD Y CG
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRD-LSSDVFVSNSLVDLYGKCGN 310
Query: 294 LVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVM---QLWGQSPSVRSLVGL 350
L A F+ +++ +WNS+++ A + +A+ +F M + P + +GL
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 351 LNSCSRAEEIGLGK-QIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR 409
LN+C+ + G+ + G E + LID+ G+ + ++ V ++ +
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGI-EPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMK 429
Query: 410 TLEC 413
E
Sbjct: 430 ADEA 433
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 8/216 (3%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE---QALHLYGEM-GLLGIRE 139
+ + +S D+++A+A+F MP RD ++N +++A C +A+ L+ M IR
Sbjct: 200 LSGYARSGDISNAVALFEDMPERDVPSWNAILAA-CTQNGLFLEAVSLFRRMINEPSIRP 258
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
T VL+ CA++G + +H + S+VFV +LV Y G E A +F
Sbjct: 259 NEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF 318
Query: 200 DELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC---FDGVEPNGVTFCYLLKVCSNHR 256
+++L WN ++ F G EE++ + M + ++P+ +TF LL C++
Sbjct: 319 KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGG 378
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACG 292
+++G+ + +E I L+D G
Sbjct: 379 LVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAG 414
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 433 LFGLMIDEGL-MPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMD 491
F LM++ + P+ + LK+ +SA S+ L+H KSG V +L+
Sbjct: 112 FFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAF--STPLVHTHLFKSGFHLYVVVQTALLH 169
Query: 492 AY-SRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEI 550
+Y S H+ L+ Q+F+ +S N + +T+M++GYAR+G +A+ M E+ D
Sbjct: 170 SYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPER----DVP 225
Query: 551 TFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
++ L C G+ E LF M + ++P++ C++ + G
Sbjct: 226 SWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTG 274
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 231/488 (47%), Gaps = 42/488 (8%)
Query: 241 NGVTFCYLLKV-CSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKK 299
+G T+ L+ CS R L K++ + ++K G + + + L ++ + A
Sbjct: 23 SGNTYLRLIDTQCSTMREL---KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYL 79
Query: 300 SFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVR----SLVGLLNSCS 355
F I +N WN+++ + + A+ +F + + SPSV+ + + +
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIF--IDMLCSSPSVKPQRLTYPSVFKAYG 137
Query: 356 RAEEIGLGKQIHCHALKLGFDEGS------------------------------VHAQSA 385
R + G+Q+H +K G ++ S V A ++
Sbjct: 138 RLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNS 197
Query: 386 LIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPD 445
+I + KC I+ + +F+ + +R NS+++ G +D +++F M ++ + PD
Sbjct: 198 MIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPD 257
Query: 446 EVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQI 505
T + L A + ++ + +H + +++ E ++ V +L+D Y +CG +E L +
Sbjct: 258 GFTMVSLLNACAYLGASE--QGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 506 FETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMV 565
FE C+ SMI G A NG ++ + + + GL+PD ++F+ LT C H+G V
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375
Query: 566 KEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLR 625
F MK + ++P +H++ MV++L AG P + D +WSSLL
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLS 435
Query: 626 SCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTRE 685
+CR N E+ RAA+ L +LDPD+ ++ SN YA G F+ + E R + R+M +E
Sbjct: 436 ACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKE 495
Query: 686 IGHSSIEI 693
+G SSIE+
Sbjct: 496 VGCSSIEV 503
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 175/392 (44%), Gaps = 46/392 (11%)
Query: 50 MQQRHQSLSFSFIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTV 109
++Q H SL + + + T T R + C + + D+N A VF + ++
Sbjct: 41 LKQIHASLIKTGLISDTVTASRVLAFCCASPS----------DMNYAYLVFTRINHKNPF 90
Query: 110 TYNLLISAWCFP--PEQALHLYGEM--GLLGIRETSTTFSSVLAVCARSGFHREGVQVHC 165
+N +I + PE A+ ++ +M ++ T+ SV R G R+G Q+H
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 166 RVVKFGFLSNVFVGGTLVGFYL-------------------------------NVGLREV 194
V+K G + F+ T++ Y+ GL +
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQ 210
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
A+ LFDE+P+RN WN ++ GF G +++L+ + M V+P+G T LL C+
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
+G+ + I++ F E N V AL+D Y CGC+ FE P + + WNS
Sbjct: 271 LGASEQGRWIHEYIVRNRF-ELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNS 329
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
++ A+N A++LF+ ++ G P S +G+L +C+ + E+ + +
Sbjct: 330 MILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKY 389
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESL 406
E S+ + ++++ G +E + A+ +++
Sbjct: 390 MIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM 421
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 3/244 (1%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGL 134
V N I F K ++ A +F MP R+ V++N +IS + + AL ++ EM
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQE 251
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
++ T S+L CA G +G +H +V+ F N V L+ Y G E
Sbjct: 252 KDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEE 311
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
+F+ P++ L+ WN ++ G G E +++ +S + G+EP+ V+F +L C++
Sbjct: 312 GLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAH 371
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV-ENVISWN 313
++ + + + +E +I +V+ G L A+ + +PV E+ + W+
Sbjct: 372 SGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWS 431
Query: 314 SLVS 317
SL+S
Sbjct: 432 SLLS 435
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 207/417 (49%), Gaps = 9/417 (2%)
Query: 264 LQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADND 323
L + LK+GF S+ F N LV Y + A+K F+ + NV+SW S++S D
Sbjct: 51 LHTLTLKLGFA-SDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 324 LLCDALELFTVM-QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHA 382
+AL +F M + P+ + + +CS E +GK IH L++ ++
Sbjct: 110 KPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHAR-LEISGLRRNIVV 168
Query: 383 QSALIDMYGKCSDIESSVAVFESLTK--RTLECCNSLMTSLSHCGATQDVVELFGLMIDE 440
S+L+DMYGKC+D+E++ VF+S+ R + S++T+ + + +ELF +
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-RSFNA 227
Query: 441 GLMPDEVTFSTTLKALSVSAS-ATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHV 499
L D +S +S ++ H + G E + VA SL+D Y++CG +
Sbjct: 228 ALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
Query: 500 ELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGC 559
+ +IF + + I +TSMI A++G+G+ + + MV + P+ +T L L C
Sbjct: 288 SCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHAC 347
Query: 560 NHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXX--XXXXXXXXQTPDKRDC 617
+H+G+V EG M +GV PD RH++C+VD+L R G + ++
Sbjct: 348 SHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGA 407
Query: 618 FMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIR 674
+W +LL + R H E+ + A++ L++ + + ++ SN YA G ++ S +R
Sbjct: 408 LLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLR 464
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 188/413 (45%), Gaps = 29/413 (7%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGL- 134
+T N + +++K +++N+A +F M + V++ +IS + P+ AL ++ +M
Sbjct: 65 FTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHED 124
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
+ TF+SV C+ R G +H R+ G N+ V +LV Y E
Sbjct: 125 RPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVET 184
Query: 195 ARELFDELPE--RNLAVWNVLLRGFCELGCVEESLNYYSRM--CFDGVEPNGVTFCYLLK 250
AR +FD + RN+ W ++ + + E++ + N ++
Sbjct: 185 ARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVIS 244
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVI 310
CS+ RL GK + + G+ ESN VA +L+D Y+ CG L A+K F I +VI
Sbjct: 245 ACSSLGRLQWGKVAHGLVTRGGY-ESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVI 303
Query: 311 SWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLG-KQIHCH 369
S+ S++ A + L A++LF M +P+ +L+G+L++CS + + G + +
Sbjct: 304 SYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLM 363
Query: 370 ALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQD 429
A K G S H + ++DM G+ ++ + + +T+E GA Q
Sbjct: 364 AEKYGVVPDSRH-YTCVVDMLGRFGRVDEAYEL-----AKTIE-----------VGAEQG 406
Query: 430 VVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSS--QLLHCFALKSGVE 480
+ L+G ++ G + V + + ++ TS+ L + +A+ G E
Sbjct: 407 AL-LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWE 458
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 456 LSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAI 515
LS S +A FT+ LLH LK G D L+ +Y + + + ++F+ + PN +
Sbjct: 39 LSESTNAAFTN--LLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVV 96
Query: 516 CFTSMINGYARNGMGKQGLAVLHAMVE-KGLKPDEITFLCALTGCNHTGMVKEGRILFDS 574
+TS+I+GY G + L++ M E + + P+E TF C+ + G+ +
Sbjct: 97 SWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHAR 156
Query: 575 MKSVHGVQPDQRHFSCMVDL 594
++ + G++ + S +VD+
Sbjct: 157 LE-ISGLRRNIVVSSSLVDM 175
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 158/647 (24%), Positives = 278/647 (42%), Gaps = 95/647 (14%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYG 130
P + T N + ++K R +N A +F MP ++ V++ ++++A C E A+ L+
Sbjct: 104 PERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFD 162
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRV----------------------- 167
EM ++++++ R+G + QV +
Sbjct: 163 EMP----ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEE 218
Query: 168 --VKFGFLS--NVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCV 223
+ FG +S NV ++V Y G A LF E+PERN+ W ++ GF
Sbjct: 219 AKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELY 278
Query: 224 EESLNYYSRMC--FDGVEPNGVTFCYLLKVCSN----HRRLNEGKKLQSCILKMGF--VE 275
E+L + M D V PNG T L C RRL G++L + ++ G+ V+
Sbjct: 279 REALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRL--GEQLHAQVISNGWETVD 336
Query: 276 SNIFVANALVDFYSACGCLVGAKKSF-EAIPVENVISWNSLVSVNADNDLLCDALELFTV 334
+ +A +LV Y++ G + A+ E+ ++ S N +++ N L A LF
Sbjct: 337 HDGRLAKSLVHMYASSGLIASAQSLLNESFDLQ---SCNIIINRYLKNGDLERAETLFER 393
Query: 335 MQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
+ K +H + +++ID Y +
Sbjct: 394 V----------------------------KSLHDKV-----------SWTSMIDGYLEAG 414
Query: 395 DIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
D+ + +F+ L + +++ L + L M+ GL P T+S L
Sbjct: 415 DVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Query: 455 ALSVSASATFTSSQLLHCFALKSGV--EGDAAVACSLMDAYSRCGHVELSLQIFETLSSP 512
S A++ + +HC K+ + D + SL+ Y++CG +E + +IF +
Sbjct: 475 --SAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK 532
Query: 513 NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILF 572
+ + + SMI G + +G+ + L + M++ G KP+ +TFL L+ C+H+G++ G LF
Sbjct: 533 DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELF 592
Query: 573 DSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSC----R 628
+MK + +QP H+ M+DLL RAG P D ++ +LL C R
Sbjct: 593 KAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWR 652
Query: 629 SHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIRE 675
E + RAA L+ELDP + + N YA +G D +E+R+
Sbjct: 653 DKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRK 699
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 145/607 (23%), Positives = 267/607 (43%), Gaps = 80/607 (13%)
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
T+ + + ++ + ++SG RE V +++ NV+ ++ Y+ + ARELF
Sbjct: 22 TAVSSNQLVNLYSKSGLLREARNVFDEMLE----RNVYSWNAVIAAYVKFNNVKEARELF 77
Query: 200 DELP-ERNLAVWNVLLRGFCEL-GCVEESLNYYSRMCF---DGVEPNGVTFCYLLKVCSN 254
+ ER+L +N LL GF + GC E++ + M D + + T ++K+ +
Sbjct: 78 ESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAK 137
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE------- 307
+ G++L ++K G + F ++L+ YS CG F VE
Sbjct: 138 LTNVFYGEQLHGVLVKTG-NDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVAR 196
Query: 308 ---------------------------NVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
+ ISWN+L++ A N +AL++ M+ G
Sbjct: 197 NAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGL 256
Query: 341 SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIE--- 397
S +LN S + + +GK++H LK G + S ++D+Y KC +++
Sbjct: 257 KWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG-SYSNKFVSSGIVDVYCKCGNMKYAE 315
Query: 398 --------------SSVAV--------------FESLTKRTLECCNSLMTSLSHCGATQD 429
SS+ V F+SL+++ L ++ +
Sbjct: 316 SAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDS 375
Query: 430 VVELF-GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACS 488
V+EL + +E PD + + L A S+ A + +H +L++G+ D + +
Sbjct: 376 VLELARAFIANETNTPDSLVMVSVLGACSLQA--YMEPGKEIHGHSLRTGILMDKKLVTA 433
Query: 489 LMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPD 548
+D YS+CG+VE + +IF++ + + + +MI G A +G + M E G KPD
Sbjct: 434 FVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPD 493
Query: 549 EITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXX 608
EITF+ L+ C H G+V EG F SM + + P+ H++CM+DL +A
Sbjct: 494 EITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELM 553
Query: 609 XQTPD-KRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNF 667
++D + + L +C +KN E+ + L+ ++ + + ++Q +N YA G +
Sbjct: 554 EGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRW 613
Query: 668 DASREIR 674
D + IR
Sbjct: 614 DEMQRIR 620
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 156/364 (42%), Gaps = 36/364 (9%)
Query: 80 KNREIDAFIKSRDLNSALAVFHTMP-LRDTVTYNLLISAWCFP--PEQALHLYGEMGLLG 136
+N I A+ + D++ AL+VF P L DT+++N LI+ + E+AL + M G
Sbjct: 196 RNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENG 255
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV-- 194
++ +F +VL V + + G +VH RV+K G SN FV +V Y G +
Sbjct: 256 LKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAE 315
Query: 195 -----------------------------ARELFDELPERNLAVWNVLLRGFCELGCVEE 225
A+ LFD L E+NL VW + G+ L +
Sbjct: 316 SAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDS 375
Query: 226 SLNYYSRMCFDGVE-PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANAL 284
L + P+ + +L CS + GK++ L+ G + V A
Sbjct: 376 VLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT-AF 434
Query: 285 VDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSV 344
VD YS CG + A++ F++ + + +N++++ A + + + F M G P
Sbjct: 435 VDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDE 494
Query: 345 RSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFE 404
+ + LL++C + G++ ++ + +ID+YGK ++ ++ + E
Sbjct: 495 ITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELME 554
Query: 405 SLTK 408
+ +
Sbjct: 555 GIDQ 558
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 187/385 (48%), Gaps = 38/385 (9%)
Query: 341 SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG-------------------------- 374
+P+ + LL SCS GK IH H LK G
Sbjct: 127 NPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQK 182
Query: 375 -FD---EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDV 430
FD E S+ + +A+I Y K ++E++ A+F+S+ +R + N ++ + G D
Sbjct: 183 VFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDA 242
Query: 431 VELFGLMIDEGL-MPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSL 489
+ LF ++ EG PDE+T L A S + + +H F S + + V L
Sbjct: 243 LMLFQKLLAEGKPKPDEITVVAALSA--CSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 490 MDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVE-KGLKPD 548
+D YS+CG +E ++ +F + + + +MI GYA +G + L + + M GL+P
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 549 EITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXX 608
+ITF+ L C H G+V EG +F+SM +G++P H+ C+V LL RAG
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 609 XQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFD 668
D +WSS+L SC+ H + +G A+ L+ L+ + +++ SN YA +G+++
Sbjct: 421 KNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYE 480
Query: 669 ASREIREVALARKMTREIGHSSIEI 693
++R + + + +E G S+IEI
Sbjct: 481 GVAKVRNLMKEKGIVKEPGISTIEI 505
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 139/316 (43%), Gaps = 40/316 (12%)
Query: 86 AFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGIRETSTT 143
A+ + +LA+FH D + I+ +QA LY ++ I T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
FSS+L C+ + G +H V+KFG + +V LV Y G A+++FD +P
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 204 ERNL-------------------------------AVWNVLLRGFCELGCVEESLNYYSR 232
ER+L WNV++ G+ + G ++L + +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 233 MCFDG-VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSAC 291
+ +G +P+ +T L CS L G+ + +K + N+ V L+D YS C
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIH-VFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 292 GCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ-LWGQSPSVRSLVGL 350
G L A F P +++++WN++++ A + DAL LF MQ + G P+ + +G
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 351 LNSCSRAEEIGLGKQI 366
L +C+ A + G +I
Sbjct: 368 LQACAHAGLVNEGIRI 383
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 143/349 (40%), Gaps = 54/349 (15%)
Query: 342 PSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDM-----YGKCSDI 396
P L L++ +E+ QIH L+ +H + ++++ Y I
Sbjct: 27 PPPEKLAVLIDKSQSVDEV---LQIHAAILRHNL---LLHPRYPVLNLKLHRAYASHGKI 80
Query: 397 ESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKAL 456
S+A+F L + + + S G L+ ++ + P+E TFS+ LK+
Sbjct: 81 RHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC 140
Query: 457 SVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAIC 516
S S +L+H LK G+ D VA L+D Y++ G V + ++F+ + + +
Sbjct: 141 STK------SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVS 194
Query: 517 FTSMINGYARNGMGKQGLAVLHAMVEKGL------------------------------- 545
T+MI YA+ G + A+ +M E+ +
Sbjct: 195 STAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGK 254
Query: 546 -KPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXX 604
KPDEIT + AL+ C+ G ++ GR + +KS ++ + + + ++D+ + G
Sbjct: 255 PKPDEITVVAALSACSQIGALETGRWIHVFVKSSR-IRLNVKVCTGLIDMYSKCGSLEEA 313
Query: 605 XXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTR---AAQVLVELDPDD 650
TP ++D W++++ H + R Q + L P D
Sbjct: 314 VLVFNDTP-RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTD 361
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 222/456 (48%), Gaps = 22/456 (4%)
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVEN 308
L + S + L K++ + I+ +G ++ L S+ CL A IP +
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLL--HLSSTVCLSYALSILRQIPNPS 70
Query: 309 VISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSR----------AE 358
V +N+L+S N ++ + L+ Q S RS N + A+
Sbjct: 71 VFLYNTLISSIVSNH---NSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQ 127
Query: 359 EIGLGKQIHCHALKLGFDEGSVH---AQSALIDMYGKCSDIESSVAVFESLTKRTLECCN 415
G+ +H H LK F E H Q+AL+ Y C + + ++FE + + L N
Sbjct: 128 WHRHGRALHAHVLK--FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWN 185
Query: 416 SLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFAL 475
+L+ + ++ E+ L + + P+E++ +K S + F H + L
Sbjct: 186 TLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIK--SCANLGEFVRGVWAHVYVL 243
Query: 476 KSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLA 535
K+ + + V SL+D YS+CG + + ++F+ +S + C+ +MI G A +G G++G+
Sbjct: 244 KNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIE 303
Query: 536 VLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLL 595
+ +++ +GL PD TF+ ++ C+H+G+V EG +F+SMK+V+G++P H+ C+VDLL
Sbjct: 304 LYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLL 363
Query: 596 CRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWL 655
R+G + P K + +W S L S ++H + E G A + L+ L+ ++ ++
Sbjct: 364 GRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYV 423
Query: 656 QASNFYAEIGNFDASREIREVALARKMTREIGHSSI 691
SN YA + + + RE+ ++ + G S++
Sbjct: 424 LLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 146/326 (44%), Gaps = 28/326 (8%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWC-----FPPEQALHLYGEMGLLG-----IRETST 142
L+ AL++ +P YN LIS+ A LY + +L +R
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQ--ILSSRSNFVRPNEF 113
Query: 143 TFSSVLAVCARSGF----HREGVQVHCRVVKF--GFLSNVFVGGTLVGFYLNVGLREVAR 196
T+ S+ SGF HR G +H V+KF + FV LVGFY N G AR
Sbjct: 114 TYPSLFKA---SGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREAR 170
Query: 197 ELFDELPERNLAVWNVLLRGFC---ELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
LF+ + E +LA WN LL + E+ EE L + RM V PN ++ L+K C+
Sbjct: 171 SLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCA 227
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWN 313
N G +LK N FV +L+D YS CGCL A+K F+ + +V +N
Sbjct: 228 NLGEFVRGVWAHVYVLKNNLT-LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYN 286
Query: 314 SLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL 373
+++ A + + +EL+ + G P + V +++CS + + G QI +
Sbjct: 287 AMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAV 346
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESS 399
E V L+D+ G+ +E +
Sbjct: 347 YGIEPKVEHYGCLVDLLGRSGRLEEA 372
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 9/230 (3%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWCFPPE-----QALHLYGEMGLLGIRETSTTFSSV 147
L A ++F + D T+N L++A+ E + L L+ M +R + ++
Sbjct: 166 LREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVAL 222
Query: 148 LAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNL 207
+ CA G GV H V+K N FVG +L+ Y G AR++FDE+ +R++
Sbjct: 223 IKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDV 282
Query: 208 AVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSC 267
+ +N ++RG G +E + Y + G+ P+ TF + CS+ ++EG ++ +
Sbjct: 283 SCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNS 342
Query: 268 ILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
+ + +E + LVD G L A++ + +PV+ N W S +
Sbjct: 343 MKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFL 392
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 181/345 (52%), Gaps = 3/345 (0%)
Query: 350 LLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR 409
LL C + +E GK+IH +GF + + L+ +Y D++++ +F SL R
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNE-YLKVKLLILYALSGDLQTAGILFRSLKIR 172
Query: 410 TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQL 469
L N++++ G Q+ + ++ M ++PD+ TF++ +A SA +
Sbjct: 173 DLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRA--CSALDRLEHGKR 230
Query: 470 LHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGM 529
H +K ++ + V +L+D Y +C ++F+ LS+ N I +TS+I+GY +G
Sbjct: 231 AHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK 290
Query: 530 GKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFS 589
+ L M E+G +P+ +TFL LT CNH G+V +G F SMK +G++P+ +H++
Sbjct: 291 VSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYA 350
Query: 590 CMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPD 649
MVD L RAG ++P K +W SLL +CR H N ++ AA +ELDP
Sbjct: 351 AMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPT 410
Query: 650 DPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
+ ++ +N YA G +A+ ++R + ++ G+S IE++
Sbjct: 411 NGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQ 455
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 137/274 (50%), Gaps = 10/274 (3%)
Query: 132 MGLL---GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+GLL G++ T++ +L C + + +G ++H ++ GF N ++ L+ Y
Sbjct: 96 VGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYAL 155
Query: 189 VGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYL 248
G + A LF L R+L WN ++ G+ + G +E L Y M + + P+ TF +
Sbjct: 156 SGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASV 215
Query: 249 LKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVEN 308
+ CS RL GK+ + ++K ++SNI V +ALVD Y C + F+ + N
Sbjct: 216 FRACSALDRLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRN 274
Query: 309 VISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHC 368
VI+W SL+S + + + L+ F M+ G P+ + + +L +C+ + G + H
Sbjct: 275 VITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HF 333
Query: 369 HALKLGFD---EGSVHAQSALIDMYGKCSDIESS 399
+++K + EG +A A++D G+ ++ +
Sbjct: 334 YSMKRDYGIEPEGQHYA--AMVDTLGRAGRLQEA 365
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 2/186 (1%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLL 135
Y K + + + S DL +A +F ++ +RD + +N +IS + ++ L +Y +M
Sbjct: 144 YLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN 203
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
I TF+SV C+ G + H ++K SN+ V LV Y
Sbjct: 204 RIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDG 263
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
+FD+L RN+ W L+ G+ G V E L + +M +G PN VTF +L C++
Sbjct: 264 HRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHG 323
Query: 256 RRLNEG 261
+++G
Sbjct: 324 GLVDKG 329
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 215/439 (48%), Gaps = 43/439 (9%)
Query: 296 GAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCS 355
A K F+ IP +VIS +++ +A + F + G P+ + ++ S +
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 356 RAEEIGLGKQIHCHALKLG---------------------------FDEG---SVHAQSA 385
+ ++ LGKQ+HC+ALK+G FD+ +V + +
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 386 LIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG-LMP 444
LI Y K + E ++++F ++ +R++ N+++ S G ++ V F M+ EG ++P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 445 DEVTFSTTLKALSVSASATFTSSQLLHCFALKS-GVEGDAAVACSLMDAYSRCGHVELSL 503
+E TF + A +S A+ + + +H A+K G + V SL+ YS+CG++E SL
Sbjct: 225 NESTFPCAITA--ISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 504 QIFETLSSP--NAICFTSMINGYARNGMGKQGLAVLHAMV-EKGLKPDEITFLCALTGCN 560
F L N + + SMI GYA NG G++ +A+ MV + L+P+ +T L L CN
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 561 HTGMVKEGRILFDSMKSVHGVQP----DQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRD 616
H G+++EG + F+ K+V+ + H++CMVD+L R+G P
Sbjct: 343 HAGLIQEGYMYFN--KAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 617 CFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREV 676
W +LL C+ H N+ + AA ++ELDP D + ++ SN Y+ + N+ IR
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 677 ALARKMTREIGHSSIEIRQ 695
+ R G S IE+R
Sbjct: 461 MKETGLKRFTGCSWIEVRD 479
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 145/318 (45%), Gaps = 37/318 (11%)
Query: 83 EIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRET 140
E+ I S + +A VF +P D ++ +I + +A + + LGIR
Sbjct: 33 ELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPN 92
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD 200
TF +V+ S + G Q+HC +K G SNVFVG ++ Y+ + AR FD
Sbjct: 93 EFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFD 152
Query: 201 E-------------------------------LPERNLAVWNVLLRGFCELGCVEESLNY 229
+ +PER++ WN ++ GF + G EE++N
Sbjct: 153 DTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNT 212
Query: 230 YSRMCFDGVE-PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFY 288
+ M +GV PN TF + SN GK + +C +K N+FV N+L+ FY
Sbjct: 213 FVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFY 272
Query: 289 SACGCLVGAKKSFEAIPVE--NVISWNSLVSVNADNDLLCDALELFTVM-QLWGQSPSVR 345
S CG + + +F + E N++SWNS++ A N +A+ +F M + P+
Sbjct: 273 SKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNV 332
Query: 346 SLVGLLNSCSRAEEIGLG 363
+++G+L +C+ A I G
Sbjct: 333 TILGVLFACNHAGLIQEG 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 9/198 (4%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHL 128
R+P+ V + I ++K + AL++F MP R VT+N +I + E+A++
Sbjct: 155 RDPN--VVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNT 212
Query: 129 YGEMGLLGIR-ETSTTFSSVLAVCARSGFHREGVQVHCRVVKF-GFLSNVFVGGTLVGFY 186
+ +M G+ +TF + + H G +H +KF G NVFV +L+ FY
Sbjct: 213 FVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFY 272
Query: 187 LNVGLREVARELFDELPE--RNLAVWNVLLRGFCELGCVEESLNYYSRMCFD-GVEPNGV 243
G E + F++L E RN+ WN ++ G+ G EE++ + +M D + PN V
Sbjct: 273 SKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNV 332
Query: 244 TFCYLLKVCSNHRRLNEG 261
T +L C++ + EG
Sbjct: 333 TILGVLFACNHAGLIQEG 350
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 189/421 (44%), Gaps = 36/421 (8%)
Query: 307 ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCS--RAEEIGLGK 364
E +SW S +++ N L +A + F+ M L G P+ + + LL+ C + LG
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 365 QIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHC 424
+H +A KLG D V +A+I MY K + + VF+ + + N+++
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 425 GATQDVVELFGLMIDE-------------------------------GLMPDEVTFSTTL 453
G + ++F M + G+ PD V L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 454 KALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPN 513
A + + +F +H + L + + V+ SL+D Y RCG VE + Q+F +
Sbjct: 214 NACTNLGALSF--GLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 514 AICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFD 573
+ + S+I G+A NG + L M EKG KPD +TF ALT C+H G+V+EG F
Sbjct: 272 VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQ 331
Query: 574 SMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNE 633
MK + + P H+ C+VDL RAG P K + + SLL +C +H N
Sbjct: 332 IMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN 391
Query: 634 EV-GTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
V R + L +L+ + ++ SN YA G ++ + ++R + ++ G SSIE
Sbjct: 392 IVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIE 451
Query: 693 I 693
I
Sbjct: 452 I 452
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 152/338 (44%), Gaps = 38/338 (11%)
Query: 124 QALHLYGEMGLLGIRETSTTFSSVLAVCA--RSGFHREGVQVHCRVVKFGFLSN-VFVGG 180
+A + +M L G+ TF ++L+ C SG G +H K G N V VG
Sbjct: 54 EAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGT 113
Query: 181 TLVGFYLNVGLREVAR-------------------------------ELFDELPERNLAV 209
++G Y G + AR ++FD++PER+L
Sbjct: 114 AIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLIS 173
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
W ++ GF + G EE+L ++ M GV+P+ V L C+N L+ G + +L
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDAL 329
F ++N+ V+N+L+D Y CGC+ A++ F + V+SWNS++ A N ++L
Sbjct: 234 SQDF-KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESL 292
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD-EGSVHAQSALID 388
F MQ G P + G L +CS + G + + +K + + L+D
Sbjct: 293 VYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQIMKCDYRISPRIEHYGCLVD 351
Query: 389 MYGKCSDIESSVAVFESLTKRTLECC-NSLMTSLSHCG 425
+Y + +E ++ + +S+ + E SL+ + S+ G
Sbjct: 352 LYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 157/356 (44%), Gaps = 42/356 (11%)
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE--GKKLQSC 267
W + G + E+ +S M GVEPN +TF LL C + +E G L
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGY 98
Query: 268 ILKMGFVESNIFVA-------------------------------NALVDFYSACGCLVG 296
K+G +++ V N ++D Y G +
Sbjct: 99 ACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDN 158
Query: 297 AKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSR 356
A K F+ +P ++ISW ++++ +AL F MQ+ G P +++ LN+C+
Sbjct: 159 AAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTN 218
Query: 357 AEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNS 416
+ G +H + L F + +V ++LID+Y +C +E + VF ++ KRT+ NS
Sbjct: 219 LGALSFGLWVHRYVLSQDF-KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNS 277
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSA--SATFTSSQLLHC-F 473
++ + G + + F M ++G PD VTF+ L A S Q++ C +
Sbjct: 278 VIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDY 337
Query: 474 ALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNG 528
+ +E C L+D YSR G +E +L++ +++ PN + S++ + +G
Sbjct: 338 RISPRIE---HYGC-LVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 4/232 (1%)
Query: 79 TKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLG 136
T N ID +++S +++A +F MP RD +++ +I+ + E+AL + EM + G
Sbjct: 142 TWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG 201
Query: 137 IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAR 196
++ + L C G G+ VH V+ F +NV V +L+ Y G E AR
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 197 ELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
++F + +R + WN ++ GF G ESL Y+ +M G +P+ VTF L CS+
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVG 321
Query: 257 RLNEGKKLQSCILKMGF-VESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
+ EG + I+K + + I LVD YS G L A K +++P++
Sbjct: 322 LVEEGLRYFQ-IMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 34/250 (13%)
Query: 407 TKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTS 466
T T S + L+ G + + F M G+ P+ +TF L S +
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL 91
Query: 467 SQLLHCFALKSGVE------GDAAVAC--------------------------SLMDAYS 494
LLH +A K G++ G A + +++D Y
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYM 151
Query: 495 RCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
R G V+ + ++F+ + + I +T+MING+ + G ++ L M G+KPD + +
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 555 ALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDK 614
AL C + G + G + + S + + R + ++DL CR G +K
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLS-QDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM-EK 269
Query: 615 RDCFMWSSLL 624
R W+S++
Sbjct: 270 RTVVSWNSVI 279
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 224/481 (46%), Gaps = 37/481 (7%)
Query: 235 FDGVEPNGVTFC----YLLKVCS-NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYS 289
+ G+ GV F +L+ C+ R+ GK L S +K G V S++ V ++L+ Y
Sbjct: 34 YGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFG-VCSDVMVGSSLISMYG 92
Query: 290 ACGCLVGAKKSFEAIPVENVISWNSLVS---VNADNDLLCDALELFTV----------MQ 336
CGC+V A+K F+ +P NV +WN+++ N D L E +V ++
Sbjct: 93 KCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIK 152
Query: 337 LWGQSPSVRSLVGLLNSCS------RAEEIGLGKQIHCHALKLG------FDEGSVHAQS 384
+G+ + L +A + LG ++ ++ E + S
Sbjct: 153 GYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWS 212
Query: 385 ALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMP 444
++ Y + D+ + A+F + R L N+L+ + G + D ++ F M EG P
Sbjct: 213 LMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEP 272
Query: 445 DEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQ 504
D VT S+ L A + S + +H G+E + V+ +L+D Y++CG +E +
Sbjct: 273 DAVTVSSILSA--CAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATS 330
Query: 505 IFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGM 564
+FE++S + C SMI+ A +G GK+ L + M LKPDEITF+ LT C H G
Sbjct: 331 VFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGF 390
Query: 565 VKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLL 624
+ EG +F MK+ V+P+ +HF C++ LL R+G + K + + +LL
Sbjct: 391 LMEGLKIFSEMKT-QDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALL 449
Query: 625 RSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTR 684
+C+ H + E+ A QV+ ++ + N A I N A E + A A ++
Sbjct: 450 GACKVHMDTEM---AEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEM 506
Query: 685 E 685
E
Sbjct: 507 E 507
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 182/374 (48%), Gaps = 56/374 (14%)
Query: 122 PEQALHLYGEMGLLGIRETSTTFSS----VLAVCA----RSGFHREGVQVHCRVVKFGFL 173
P QAL LYG GIR F +L CA R G +H +KFG
Sbjct: 27 PIQALVLYG-----GIRRRGVYFPGWVPLILRACACVVPRVVL---GKLLHSESIKFGVC 78
Query: 174 SNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG------------ 221
S+V VG +L+ Y G AR++FDE+PERN+A WN ++ G+ G
Sbjct: 79 SDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI 138
Query: 222 --C------------------VEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
C +E++ + RM F+ N + +L V N+R++ +
Sbjct: 139 SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE--LKNVKAWSVMLGVYVNNRKMEDA 196
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
+K I E N FV + ++ Y G + A+ F + +++ WN+L++ A
Sbjct: 197 RKFFEDI-----PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQ 251
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
N DA++ F MQ G P ++ +L++C+++ + +G+++H G E +
Sbjct: 252 NGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGI-ELNQF 310
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
+ALIDMY KC D+E++ +VFES++ R++ CCNS+++ L+ G ++ +E+F M
Sbjct: 311 VSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLD 370
Query: 442 LMPDEVTFSTTLKA 455
L PDE+TF L A
Sbjct: 371 LKPDEITFIAVLTA 384
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 137/297 (46%), Gaps = 47/297 (15%)
Query: 95 SALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARS 154
SA VF MP R+ T+N +I + + L GL E S ++V +
Sbjct: 99 SARKVFDEMPERNVATWNAMIGGYMSNGDAVL----ASGLF--EEISVCRNTVTWIEMIK 152
Query: 155 GFHREGVQVHCRVVKFGF------LSNVFVGGTLVGFYLNVGLREVARELFDELPERN-- 206
G+ G ++ + F L NV ++G Y+N E AR+ F+++PE+N
Sbjct: 153 GY---GKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAF 209
Query: 207 -----------------------------LAVWNVLLRGFCELGCVEESLNYYSRMCFDG 237
L +WN L+ G+ + G +++++ + M +G
Sbjct: 210 VWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEG 269
Query: 238 VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGA 297
EP+ VT +L C+ RL+ G+++ S I G +E N FV+NAL+D Y+ CG L A
Sbjct: 270 YEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG-IELNQFVSNALIDMYAKCGDLENA 328
Query: 298 KKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSC 354
FE+I V +V NS++S A + +ALE+F+ M+ P + + +L +C
Sbjct: 329 TSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC 385
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYG 130
P + + + + + D++ A A+F+ + RD V +N LI+ + + A+ +
Sbjct: 204 PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFF 263
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
M G + T SS+L+ CA+SG G +VH + G N FV L+ Y G
Sbjct: 264 NMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCG 323
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
E A +F+ + R++A N ++ G +E+L +S M ++P+ +TF +L
Sbjct: 324 DLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLT 383
Query: 251 VCSNHRRLNEGKKLQS 266
C + L EG K+ S
Sbjct: 384 ACVHGGFLMEGLKIFS 399
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 191/386 (49%), Gaps = 38/386 (9%)
Query: 341 SPSVRSLVGLLNSCS--RAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYG------- 391
P ++ L+ +C+ R E GL Q+H ++ GFD H Q+ LI +Y
Sbjct: 105 KPDNYTVNFLVQACTGLRMRETGL--QVHGMTIRRGFDNDP-HVQTGLISLYAELGCLDS 161
Query: 392 ------------------------KCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGAT 427
+C D+ + +FE + +R N++++ + G +
Sbjct: 162 CHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGES 221
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVAC 487
++ + +F LM EG+ + V + L A + + H + ++ ++ +A
Sbjct: 222 REALNVFHLMQLEGVKVNGVAMISVLSA--CTQLGALDQGRWAHSYIERNKIKITVRLAT 279
Query: 488 SLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKP 547
+L+D Y++CG +E ++++F + N ++S +NG A NG G++ L + M + G+ P
Sbjct: 280 TLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTP 339
Query: 548 DEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXX 607
+ +TF+ L GC+ G V EG+ FDSM++ G++P H+ C+VDL RAG
Sbjct: 340 NAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSI 399
Query: 608 XXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNF 667
Q P K +WSSLL + R +KN E+G A++ ++EL+ + ++ SN YA+ ++
Sbjct: 400 IQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDW 459
Query: 668 DASREIREVALARKMTREIGHSSIEI 693
D +R+ ++ + ++ G S +E+
Sbjct: 460 DNVSHVRQSMKSKGVRKQPGCSVMEV 485
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 195/408 (47%), Gaps = 51/408 (12%)
Query: 158 REGVQVHCRVVKFGFLSNVFVGGTLVGFYLN-VGLRE-----VARELFDELPERNLAVWN 211
+E Q+H ++ G L + LVG ++ V L + A ++ D + L N
Sbjct: 20 KEVRQIHAKLYVDGTLKD----DHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALN 75
Query: 212 VLLRGFCELGCVEESLNYYSRMCFDG--VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
++R C+ E+S ++Y R+ G ++P+ T +L++ C+ R G ++ +
Sbjct: 76 SMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTI 135
Query: 270 KMGFVESNIFVANALVDFYSACGCL-------------------------------VGAK 298
+ GF +++ V L+ Y+ GCL V A+
Sbjct: 136 RRGF-DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 299 KSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAE 358
K FE +P + I+WN+++S A +AL +F +MQL G + +++ +L++C++
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 359 EIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLM 418
+ G+ H + ++ + +V + L+D+Y KC D+E ++ VF + ++ + +S +
Sbjct: 255 ALDQGRWAHSY-IERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSAL 313
Query: 419 TSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS- 477
L+ G + +ELF LM +G+ P+ VTF + L+ SV F H ++++
Sbjct: 314 NGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG---FVDEGQRHFDSMRNE 370
Query: 478 -GVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMING 523
G+E L+D Y+R G +E ++ I + + P+A ++S+++
Sbjct: 371 FGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 3/228 (1%)
Query: 92 DLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLA 149
D+ A +F MP RD + +N +IS + E +AL+++ M L G++ SVL+
Sbjct: 189 DVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 150 VCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAV 209
C + G +G H + + V + TLV Y G E A E+F + E+N+
Sbjct: 249 ACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 210 WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
W+ L G G E+ L +S M DGV PN VTF +L+ CS ++EG++ +
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
+E + LVD Y+ G L A + +P++ + W+SL+
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 222/463 (47%), Gaps = 24/463 (5%)
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVE--SNIFVANALVDFYSACGCLVGAKKSFEAIP 305
L + CS+ +L K+L + L+ + E + +F+ ++ S+ + A + F++I
Sbjct: 54 LAETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 306 VENVISWNSLVSVNA-DNDLLCDALELFTVMQLWGQS-PSVRSLVGLLNSCSRAEEIGLG 363
+ WN+L+ A D +A L+ M G+S P + +L +C+ G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH 423
KQ+HC +K GF G V+ + LI +YG C ++ + VF+ + +R+L NS++ +L
Sbjct: 171 KQVHCQIVKHGFG-GDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 229
Query: 424 CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS---GVE 480
G ++LF M PD T + L A + S + + H F L+ V
Sbjct: 230 FGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGT--WAHAFLLRKCDVDVA 286
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAM 540
D V SL++ Y +CG + ++ Q+F+ + + + +MI G+A +G ++ + M
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 541 VEK--GLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRA 598
V+K ++P+ +TF+ L CNH G V +GR FD M + ++P H+ C+VDL+ RA
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 406
Query: 599 GXXXXXXXXXXQTPDKRDCFMWSSLLRS-CRSHKNEEVGTRAAQVLVELDPDDPA----- 652
G P K D +W SLL + C+ + E+ A+ ++ D+ +
Sbjct: 407 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 466
Query: 653 --VWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
++ S YA ++ +R++ + +E G SSIEI
Sbjct: 467 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEI 509
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 177/371 (47%), Gaps = 20/371 (5%)
Query: 50 MQQRHQSLSFSFIRAQTTTTPRNPSDC-VYTKNREIDAFIKSRDLNSALAVFHTMPLRDT 108
M Q Q +F+ TT P P+ +Y K ++ + D+N A VF ++ +
Sbjct: 61 MSQLKQLHAFTL----RTTYPEEPATLFLYGKILQLSSSFS--DVNYAFRVFDSIENHSS 114
Query: 109 VTYNLLISAWCFP---PEQALHLYGEMGLLGIRETST---TFSSVLAVCARSGFHREGVQ 162
+N LI A E+A LY +M G E+S TF VL CA EG Q
Sbjct: 115 FMWNTLIRACAHDVSRKEEAFMLYRKMLERG--ESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 163 VHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGC 222
VHC++VK GF +V+V L+ Y + G ++AR++FDE+PER+L WN ++ G
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 223 VEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVE--SNIFV 280
+ +L + M EP+G T +L C+ L+ G + +L+ V+ ++ V
Sbjct: 233 YDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 291
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVM--QLW 338
N+L++ Y CG L A++ F+ + ++ SWN+++ A + +A+ F M +
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 339 GQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIES 398
P+ + VGLL +C+ + G+Q ++ E ++ ++D+ + I
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 411
Query: 399 SVAVFESLTKR 409
++ + S+ +
Sbjct: 412 AIDMVMSMPMK 422
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 182/348 (52%), Gaps = 7/348 (2%)
Query: 351 LNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRT 410
L C ++ ++ G QIH GF S+ + L+D+Y C + + VF+ + KR
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSL-LMTTLMDLYSTCENSTDACKVFDEIPKRD 178
Query: 411 LECCNSLMTSLSHCGATQDVVELFGLM---IDEGLMPDEVTFSTTLKALSVSASATFTSS 467
N L + T+DV+ LF M +D + PD VT L+A + + F
Sbjct: 179 TVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDF--G 236
Query: 468 QLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARN 527
+ +H F ++G+ G ++ +L+ YSRCG ++ + Q+F + N + +T++I+G A N
Sbjct: 237 KQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMN 296
Query: 528 GMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVH-GVQPDQR 586
G GK+ + + M++ G+ P+E T L+ C+H+G+V EG + FD M+S ++P+
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLH 356
Query: 587 HFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVEL 646
H+ C+VDLL RA K D +W +LL +CR H + E+G R L+EL
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 647 DPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIR 694
++ ++ N Y+ +G ++ E+R + +++ + G S+IE++
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQ 464
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 51/420 (12%)
Query: 91 RDLNSALAVFHTMPLRDTVTY-NLLISAWCFP--PEQALHLYGEM---GLLGIRETSTTF 144
RD+N + VF + L T+++ N +I A+ P + L+ + L S++F
Sbjct: 60 RDINYSCRVF-SQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSF 118
Query: 145 SSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPE 204
+ L C +SG G+Q+H ++ GFLS+ + TL+ Y A ++FDE+P+
Sbjct: 119 A--LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK 176
Query: 205 RNLAVWNVLLRGFCELGCVEESLNYYSRMC--FDG-VEPNGVTFCYLLKVCSNHRRLNEG 261
R+ WNVL + + L + +M DG V+P+GVT L+ C+N L+ G
Sbjct: 177 RDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFG 236
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
K++ I + G + + ++N LV YS CG + A + F + NV+SW +L+S A
Sbjct: 237 KQVHDFIDENG-LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAM 295
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD-EGSV 380
N +A+E F M +G SP ++L GLL++CS + + G F + ++
Sbjct: 296 NGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNL 355
Query: 381 HAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDE 440
H ++D+ G+ R L+ SL+ S+
Sbjct: 356 HHYGCVVDLLGRA---------------RLLDKAYSLIKSME------------------ 382
Query: 441 GLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE 500
+ PD + T L A V + H LK+ GD + L++ YS G E
Sbjct: 383 -MKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVL---LLNTYSTVGKWE 438
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 122/300 (40%), Gaps = 38/300 (12%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEM--GLLG-IR 138
+D + + A VF +P RDTV++N+L S + L L+ +M + G ++
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK 214
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
T L CA G G QVH + + G + + TLV Y G + A ++
Sbjct: 215 PDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQV 274
Query: 199 FDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
F + ERN+ W L+ G G +E++ ++ M G+ P T LL CS+ +
Sbjct: 275 FYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLV 334
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSV 318
EG M F + +S E N+ + +V +
Sbjct: 335 AEG---------MMFFDR---------------------MRSGEFKIKPNLHHYGCVVDL 364
Query: 319 NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG 378
LL A L M++ S R+L+G +C ++ LG+++ H ++L +E
Sbjct: 365 LGRARLLDKAYSLIKSMEMKPDSTIWRTLLG---ACRVHGDVELGERVISHLIELKAEEA 421
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 185/402 (46%), Gaps = 39/402 (9%)
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGL-LNSCSRAEEIGLGKQI 366
+IS +S A+ AL LF M P + L L SC+ A LG +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 367 HCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGA 426
H H++K F AL+DMYGKC + + +F+ + +R N++++ +HCG
Sbjct: 71 HAHSVKSNFLSNPF-VGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 427 TQDVVELFGLMIDEGLMPDEVTFSTTLKAL------------------------------ 456
++ VEL+ M +MP+E +F+ +K L
Sbjct: 130 VKEAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 457 ----SVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP 512
+ SA F + +H +A ++ +E + L++AY RCG + +F+++
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 513 NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILF 572
+ + ++S+I+ YA +G + L M + PD+I FL L C+H G+ E + F
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYF 306
Query: 573 DSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKN 632
M+ +G++ + H+SC+VD+L R G P+K W +LL +CR++
Sbjct: 307 KRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
Query: 633 EEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIR 674
E+ AA+ L+ ++P++PA ++ Y +G + + +R
Sbjct: 367 IELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLR 408
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 145/324 (44%), Gaps = 41/324 (12%)
Query: 123 EQALHLYGEM-GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGT 181
EQAL+L+ +M + + FS L CA + G VH VK FLSN FVG
Sbjct: 29 EQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCA 88
Query: 182 LVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM-------C 234
L+ Y AR+LFDE+P+RN VWN ++ + G V+E++ Y M
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESS 148
Query: 235 FDGV--------------------------EPNGVTFCYLLKVCSNHRRLNEGKKLQSCI 268
F+ + +PN +T L+ CS K++ S
Sbjct: 149 FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 269 LKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDA 328
+ +E + + + LV+ Y CG +V + F+++ +V++W+SL+S A + A
Sbjct: 209 FR-NLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESA 267
Query: 329 LELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG---SVHAQSA 385
L+ F M+L +P + + +L +CS A GL + + ++ D G S S
Sbjct: 268 LKTFQEMELAKVTPDDIAFLNVLKACSHA---GLADEALVYFKRMQGDYGLRASKDHYSC 324
Query: 386 LIDMYGKCSDIESSVAVFESLTKR 409
L+D+ + E + V +++ ++
Sbjct: 325 LVDVLSRVGRFEEAYKVIQAMPEK 348
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 153/355 (43%), Gaps = 51/355 (14%)
Query: 214 LRGFCELGCVEESLNYYSRMCFDGVEP-NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMG 272
L + G E++LN + +M P + F LK C+ R G + + +K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 273 FVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELF 332
F+ SN FV AL+D Y C + A+K F+ IP N + WN+++S + +A+EL+
Sbjct: 79 FL-SNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELY 137
Query: 333 TVMQLWGQ---------------------------------SPSVRSLVGLLNSCSRAEE 359
M + P++ +L+ L+++CS
Sbjct: 138 EAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGA 197
Query: 360 IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMT 419
L K+IH +A + E +S L++ YG+C I VF+S+ R + +SL++
Sbjct: 198 FRLIKEIHSYAFR-NLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLIS 256
Query: 420 SLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGV 479
+ + G + ++ F M + PD++ F LKA S A L++ +
Sbjct: 257 AYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACS---HAGLADEALVYF----KRM 309
Query: 480 EGDAAVACS------LMDAYSRCGHVELSLQIFETL-SSPNAICFTSMINGYARN 527
+GD + S L+D SR G E + ++ + + P A + +++ G RN
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL-GACRN 363
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 115/277 (41%), Gaps = 52/277 (18%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLLGIRETS 141
+D + K ++ A +F +P R+ V +N +IS + C ++A+ LY M ++
Sbjct: 90 LDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVM---PNE 146
Query: 142 TTFSSVLA--VCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL- 198
++F++++ V G +R ++ + ++++F F N+ LV +G + +E+
Sbjct: 147 SSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIH 205
Query: 199 ----------------------------------FDELPERNLAVWNVLLRGFCELGCVE 224
FD + +R++ W+ L+ + G E
Sbjct: 206 SYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAE 265
Query: 225 ESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG----KKLQSCILKMGFVESNIFV 280
+L + M V P+ + F +LK CS+ +E K++Q G S
Sbjct: 266 SALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG---DYGLRASKDHY 322
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
+ LVD S G A K +A+P + +W +L+
Sbjct: 323 S-CLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL 358
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 220/450 (48%), Gaps = 11/450 (2%)
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDF--YSACGCLVGAKKSFEAIP 305
+L+ C++ ++L +K+ S ++ G ++ + + N L+ F S G L A+ F+
Sbjct: 11 MLQGCNSMKKL---RKIHSHVIING-LQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFD 66
Query: 306 VENVIS-WNSLVSVNADNDLLCDALELFTVMQLWGQS-PSVRSLVGLLNSCSRAEEIGLG 363
+ S WN L+ +++ +++ + M L S P + + L SC R + I
Sbjct: 67 SDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKC 126
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH 423
+IH ++ GF + ++ A S L+ Y +E + VF+ + R L N ++ SH
Sbjct: 127 LEIHGSVIRSGFLDDAIVATS-LVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSH 185
Query: 424 CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDA 483
G + ++ M +EG+ D T L S + + +LH A E
Sbjct: 186 VGLHNQALSMYKRMGNEGVCGDSYTLVALLS--SCAHVSALNMGVMLHRIACDIRCESCV 243
Query: 484 AVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEK 543
V+ +L+D Y++CG +E ++ +F + + + + SMI GY +G G + ++ MV
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303
Query: 544 GLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXX 603
G++P+ ITFL L GC+H G+VKEG F+ M S + P+ +H+ CMVDL RAG
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363
Query: 604 XXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAE 663
+ D +W +LL SC+ H+N E+G A + LV+L+ + ++ ++ Y+
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423
Query: 664 IGNFDASREIREVALARKMTREIGHSSIEI 693
+ A +R++ + + G S IEI
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEI 453
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 161/350 (46%), Gaps = 42/350 (12%)
Query: 195 ARELFDEL-PERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGV-EPNGVTFCYLLKVC 252
A+ LFD + + + WN L+RGF S+ +Y+RM V P+ TF + LK C
Sbjct: 58 AQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSC 117
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISW 312
+ + + ++ +++ GF++ I VA +LV YSA G + A K F+ +PV +++SW
Sbjct: 118 ERIKSIPKCLEIHGSVIRSGFLDDAI-VATSLVRCYSANGSVEIASKVFDEMPVRDLVSW 176
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
N ++ + L AL ++ M G +LV LL+SC+ + +G +H +
Sbjct: 177 NVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH----R 232
Query: 373 LGFD---EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQD 429
+ D E V +ALIDMY KC +E+++ VF + KR + NS++ G +
Sbjct: 233 IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVE 292
Query: 430 VVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSL 489
+ F M+ G+ P+ +TF L S H +K GVE
Sbjct: 293 AISFFRKMVASGVRPNAITFLGLLLGCS-------------HQGLVKEGVE--------- 330
Query: 490 MDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHA 539
H E+ F +PN + M++ Y R G + L +++A
Sbjct: 331 --------HFEIMSSQFHL--TPNVKHYGCMVDLYGRAGQLENSLEMIYA 370
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 148/299 (49%), Gaps = 10/299 (3%)
Query: 108 TVTYNLLISAWC--FPPEQALHLYGEMGLLGI-RETSTTFSSVLAVCARSGFHREGVQVH 164
T +N LI + P ++ Y M L + R TF+ L C R + +++H
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIH 130
Query: 165 CRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVE 224
V++ GFL + V +LV Y G E+A ++FDE+P R+L WNV++ F +G
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHN 190
Query: 225 ESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQ--SCILKMGFVESNIFVAN 282
++L+ Y RM +GV + T LL C++ LN G L +C ++ ES +FV+N
Sbjct: 191 QALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR---CESCVFVSN 247
Query: 283 ALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSP 342
AL+D Y+ CG L A F + +V++WNS++ + +A+ F M G P
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 307
Query: 343 SVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD-EGSVHAQSALIDMYGKCSDIESSV 400
+ + +GLL CS + G + H + F +V ++D+YG+ +E+S+
Sbjct: 308 NAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSL 365
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 13/229 (5%)
Query: 96 ALAVFHTMPLRDTVTYNLLISAWCFPP----EQALHLYGEMGLLGIRETSTTFSSVLAVC 151
A VF MP+RD V++N++I CF QAL +Y MG G+ S T ++L+ C
Sbjct: 161 ASKVFDEMPVRDLVSWNVMIC--CFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSC 218
Query: 152 ARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWN 211
A GV +H S VFV L+ Y G E A +F+ + +R++ WN
Sbjct: 219 AHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWN 278
Query: 212 VLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKM 271
++ G+ G E+++++ +M GV PN +TF LL CS+ + EG + +
Sbjct: 279 SMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQ 338
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV----ENVISWNSLV 316
+ N+ +VD Y G L + S E I E+ + W +L+
Sbjct: 339 FHLTPNVKHYGCMVDLYGRAGQL---ENSLEMIYASSCHEDPVLWRTLL 384
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 76 CVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMG 133
CV+ N ID + K L +A+ VF+ M RD +T+N +I + +A+ + +M
Sbjct: 242 CVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMV 301
Query: 134 LLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVV--KFGFLSNVFVGGTLVGFYLNVGL 191
G+R + TF +L C+ G +EGV+ H ++ +F NV G +V Y G
Sbjct: 302 ASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQ 360
Query: 192 REVAREL-FDELPERNLAVWNVLLRGFCEL 220
E + E+ + + +W LL G C++
Sbjct: 361 LENSLEMIYASSCHEDPVLWRTLL-GSCKI 389
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 133/544 (24%), Positives = 242/544 (44%), Gaps = 109/544 (20%)
Query: 100 FHTMPLRDTVTY-NLLISAWCFP-------PEQALHLYGEMGLLGIRETSTTFSSVLAVC 151
++T + D+VT+ N+ + F L LY + GI + +F V+
Sbjct: 57 YYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA 116
Query: 152 ARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWN 211
R G + V K GF + +V ++ Y+ E AR++FD++ +R + WN
Sbjct: 117 GRFG-----ILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWN 171
Query: 212 VLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKM 271
V++ G+ + G EE+ + M
Sbjct: 172 VMISGYWKWGNKEEACKLFDMMP------------------------------------- 194
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALEL 331
E+++ ++ ++ L A+K F+ +P ++V+SWN+++S A N DAL L
Sbjct: 195 ---ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRL 251
Query: 332 FTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH----AQSALI 387
F M G P+ + V ++++CS + L + + +KL DE V ++AL+
Sbjct: 252 FNDMLRLGVRPNETTWVIVISACSFRADPSLTRSL----VKL-IDEKRVRLNCFVKTALL 306
Query: 388 DMYGKCSDIESSVAVF--------------------------------ESLTKRTLECCN 415
DM+ KC DI+S+ +F +++ KR + N
Sbjct: 307 DMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWN 366
Query: 416 SLMTSLSHCGATQDVVELFGLMIDEG-LMPDEVTFSTTLKALSVSASATFTSSQLLHC-- 472
SL+ +H G +E F MID G PDEVT + L SA +L C
Sbjct: 367 SLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVL-----SACGHMADLELGDCIV 421
Query: 473 -FALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGK 531
+ K+ ++ + + SL+ Y+R G++ + ++F+ + + + + ++ +A NG G
Sbjct: 422 DYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGV 481
Query: 532 QGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCM 591
+ L +L M ++G++PD +T+ LT CN G++KEG+ +F S+++ P H++CM
Sbjct: 482 ETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
Query: 592 VDLL 595
DLL
Sbjct: 537 -DLL 539
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 180/414 (43%), Gaps = 78/414 (18%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLGI 137
Y +N +D ++K + SA VF + R +N++IS +
Sbjct: 137 YVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYW------------------ 178
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
+ G E C++ ++V ++ + V E AR+
Sbjct: 179 ---------------KWGNKEEA----CKLFDMMPENDVVSWTVMITGFAKVKDLENARK 219
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH-- 255
FD +PE+++ WN +L G+ + G E++L ++ M GV PN T+ ++ CS
Sbjct: 220 YFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRAD 279
Query: 256 --------RRLNEGKKLQSCILKMGFV---------------------ESNIFVANALVD 286
+ ++E + +C +K + + N+ NA++
Sbjct: 280 PSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMIS 339
Query: 287 FYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQS-PSVR 345
Y+ G + A++ F+ +P NV+SWNSL++ A N A+E F M +G S P
Sbjct: 340 GYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEV 399
Query: 346 SLVGLLNSCSRAEEIGLG----KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVA 401
+++ +L++C ++ LG I + +KL D G +LI MY + ++ +
Sbjct: 400 TMISVLSACGHMADLELGDCIVDYIRKNQIKLN-DSG----YRSLIFMYARGGNLWEAKR 454
Query: 402 VFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
VF+ + +R + N+L T+ + G + + L M DEG+ PD VT+++ L A
Sbjct: 455 VFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 508
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYG 130
P + V + I F K +DL +A F MP + V++N ++S + E AL L+
Sbjct: 194 PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFN 253
Query: 131 EMGLLGIRETSTTFSSVLAVC---ARSGFHREGVQV---------------------HCR 166
+M LG+R TT+ V++ C A R V++ CR
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 167 VVK--------FGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFC 218
++ G N+ ++ Y +G AR+LFD +P+RN+ WN L+ G+
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 219 ELGCVEESLNYYSRMC-FDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESN 277
G ++ ++ M + +P+ VT +L C + L +L CI+ ++ N
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL----ELGDCIVD--YIRKN 427
Query: 278 IFVAN-----ALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELF 332
N +L+ Y+ G L AK+ F+ + +V+S+N+L + A N + L L
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLL 487
Query: 333 TVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQI 366
+ M+ G P + +L +C+RA + G++I
Sbjct: 488 SKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 225/487 (46%), Gaps = 51/487 (10%)
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALV-------DFYSACGCLVGAKKS 300
LL+ CS+ L K + +L+ + S++FVA+ L+ F L A
Sbjct: 18 LLQSCSSFSDL---KIIHGFLLRTHLI-SDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 301 FEAIPVENVISWNSLVSVNADNDLLCDALELFTVM---QLWGQSPSVRSLVGLLNSCSRA 357
F I N+ +N L+ + A +T M ++W P + L+ + S
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIW---PDNITFPFLIKASSEM 130
Query: 358 EEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSL 417
E + +G+Q H ++ GF + V+ +++L+ MY C I ++ +F + R + S+
Sbjct: 131 ECVLVGEQTHSQIVRFGF-QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 418 MTSLSHCGATQDV-------------------------------VELFGLMIDEGLMPDE 446
+ CG ++ ++LF M EG++ +E
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 447 VTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIF 506
+ + + + + F + + + +KS + + + +L+D + RCG +E ++ +F
Sbjct: 250 TVMVSVISSCAHLGALEF--GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 507 ETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVK 566
E L +++ ++S+I G A +G + + M+ G P ++TF L+ C+H G+V+
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 567 EGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRS 626
+G ++++MK HG++P H+ C+VD+L RAG + K + + +LL +
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGA 427
Query: 627 CRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREI 686
C+ +KN EV R +L+++ P+ ++ SN YA G +D +R++ + + +
Sbjct: 428 CKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPP 487
Query: 687 GHSSIEI 693
G S IEI
Sbjct: 488 GWSLIEI 494
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 153/342 (44%), Gaps = 38/342 (11%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAWCF----PPEQALHLYGEMGLLGIRETSTTFSSVL 148
L A +F + + +NLLI CF P +A Y +M I + TF ++
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIR--CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI 124
Query: 149 AVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN-------------VGLREV- 194
+ G Q H ++V+FGF ++V+V +LV Y N +G R+V
Sbjct: 125 KASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVV 184
Query: 195 -----------------ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG 237
ARE+FDE+P RNL W++++ G+ + C E++++ + M +G
Sbjct: 185 SWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 238 VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGA 297
V N ++ C++ L G++ ++K + N+ + ALVD + CG + A
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVK-SHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 298 KKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRA 357
FE +P + +SW+S++ A + A+ F+ M G P + +L++CS
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHG 363
Query: 358 EEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
+ G +I+ + K E + ++DM G+ + +
Sbjct: 364 GLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 6/210 (2%)
Query: 93 LNSALAVFHTMPLRDTVTYNLLISAW----CFPPEQALHLYGEMGLLGIRETSTTFSSVL 148
+ +A +F MP R+ T++++I+ + CF E+A+ L+ M G+ T SV+
Sbjct: 199 VENAREMFDEMPHRNLFTWSIMINGYAKNNCF--EKAIDLFEFMKREGVVANETVMVSVI 256
Query: 149 AVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLA 208
+ CA G G + + VVK N+ +G LV + G E A +F+ LPE +
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL 316
Query: 209 VWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCI 268
W+ +++G G ++++Y+S+M G P VTF +L CS+ + +G ++ +
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 269 LKMGFVESNIFVANALVDFYSACGCLVGAK 298
K +E + +VD G L A+
Sbjct: 377 KKDHGIEPRLEHYGCIVDMLGRAGKLAEAE 406
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/472 (25%), Positives = 214/472 (45%), Gaps = 37/472 (7%)
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANAL-VDFYSACGCLVGAKKSFEAIPVENVISWNS 314
+ ++E K+ + ++ +G E FV+ L S+ G + A K + WN
Sbjct: 19 KSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNF 78
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
++ +++ ++ ++ M +G P + L+ S SR LG +HC +K G
Sbjct: 79 VIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG 138
Query: 375 FD------------EGSVHAQSA------------------LIDMYGKCSDIESSVAVFE 404
+ GS Q++ ++D Y K D+ S+ VF+
Sbjct: 139 LEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFD 198
Query: 405 SLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGL-MPDEVTFSTTLKALSVSASAT 463
+++R + +S++ G +E+F M+ G +EVT + + A +
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICA--CAHLGA 256
Query: 464 FTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIF--ETLSSPNAICFTSMI 521
+ +H + L + + SL+D Y++CG + + +F ++ +A+ + ++I
Sbjct: 257 LNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAII 316
Query: 522 NGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
G A +G ++ L + H M E + PDEITFLC L C+H G+VKE F S+K G
Sbjct: 317 GGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GA 375
Query: 582 QPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQ 641
+P H++CMVD+L RAG + P K M +LL C +H N E+ +
Sbjct: 376 EPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGK 435
Query: 642 VLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
L+EL P + ++ +N YA F A+R +RE + + + GHS +++
Sbjct: 436 KLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDL 487
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 185/409 (45%), Gaps = 45/409 (11%)
Query: 159 EGVQVHCRVVKFGFLSN-VFVGGTLVGFYLNV-GLREVARELFDELPERNLAVWNVLLRG 216
E ++H ++ G FV TL L+ G + A + +L + WN ++RG
Sbjct: 23 ELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRG 82
Query: 217 FCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVES 276
F E+S++ Y +M G+ P+ +T+ +L+K S G L ++K G +E
Sbjct: 83 FSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG-LEW 141
Query: 277 NIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNA---------------- 320
++F+ N L+ Y + A+K F+ +P +N+++WNS++ A
Sbjct: 142 DLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS 201
Query: 321 DNDLLC---------------DALELFTVMQLWGQSPSVR-SLVGLLNSCSRAEEIGLGK 364
+ D++ ALE+F M G S + ++V ++ +C+ + GK
Sbjct: 202 ERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGK 261
Query: 365 QIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC--NSLMTSLS 422
+H + L + +V Q++LIDMY KC I + +VF + + + N+++ L+
Sbjct: 262 TVHRYILDVHLPL-TVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLA 320
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCF-ALK-SGVE 480
G ++ ++LF M + + PDE+TF L A S + H F +LK SG E
Sbjct: 321 SHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLV----KEAWHFFKSLKESGAE 376
Query: 481 GDAAVACSLMDAYSRCGHVELSLQ-IFETLSSPNAICFTSMINGYARNG 528
+ ++D SR G V+ + I E P +++NG +G
Sbjct: 377 PKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHG 425
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 35/270 (12%)
Query: 122 PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGT 181
PE+++ +Y +M G+ T+ ++ +R + G +HC VVK G ++F+ T
Sbjct: 89 PEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNT 148
Query: 182 LVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCV-----------EESLNYY 230
L+ Y + + AR+LFDE+P +NL WN +L + + G V E + +
Sbjct: 149 LIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTW 208
Query: 231 SRM---------------CFDGV------EPNGVTFCYLLKVCSNHRRLNEGKKLQSCIL 269
S M FD + + N VT ++ C++ LN GK + IL
Sbjct: 209 SSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYIL 268
Query: 270 KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE--NVISWNSLVSVNADNDLLCD 327
+ + + + +L+D Y+ CG + A F V+ + + WN+++ A + + +
Sbjct: 269 DV-HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRE 327
Query: 328 ALELFTVMQLWGQSPSVRSLVGLLNSCSRA 357
+L+LF M+ P + + LL +CS
Sbjct: 328 SLQLFHKMRESKIDPDEITFLCLLAACSHG 357
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 6/240 (2%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYG 130
P + T N +DA+ KS D+ SA VF M RD VT++ +I + E +AL ++
Sbjct: 170 PHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFD 229
Query: 131 EMGLLGI-RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNV 189
+M +G + T SV+ CA G G VH ++ V + +L+ Y
Sbjct: 230 QMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKC 289
Query: 190 GLREVARELF--DELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCY 247
G A +F + E + +WN ++ G G + ESL + +M ++P+ +TF
Sbjct: 290 GSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLC 349
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
LL CS+ + E + + G + A +VD S G + A +P++
Sbjct: 350 LLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYA-CMVDVLSRAGLVKDAHDFISEMPIK 408
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 141/660 (21%), Positives = 278/660 (42%), Gaps = 97/660 (14%)
Query: 39 SYRSGTKLWPLMQQRHQSLSFSFIRA--QTTTTPRNPSDCVYTKNREIDAFIKSRDLNSA 96
SY + ++P F+ +R+ +++ PR P I K + A
Sbjct: 11 SYYKRSSVFPSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEWL-----IGELCKVGKIAEA 65
Query: 97 LAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGF 156
+F +P RD VT+ +I+ G + L +RE AR F
Sbjct: 66 RKLFDGLPERDVVTWTHVIT-------------GYIKLGDMRE------------ARELF 100
Query: 157 HREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRG 216
R V R NV +V YL +A LF E+PERN+ WN ++ G
Sbjct: 101 DR----VDSR-------KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDG 149
Query: 217 FCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVES 276
+ + G ++++L + M E N V++ ++K R++E L + +
Sbjct: 150 YAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMNLFERMPR-----R 200
Query: 277 NIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ 336
++ A+VD + G + A++ F+ +P N+ISWN++++ A N+ + +A +LF VM
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMP 260
Query: 337 LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
E + + +I + + ++
Sbjct: 261 ----------------------------------------ERDFASWNTMITGFIRNREM 280
Query: 397 ESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG-LMPDEVTFSTTLKA 455
+ +F+ + ++ + +++T ++ + +F M+ +G + P+ T+ + L A
Sbjct: 281 NKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Query: 456 LSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFET--LSSPN 513
S A Q +H KS + + V +L++ YS+ G + + ++F+ + +
Sbjct: 341 --CSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRD 398
Query: 514 AICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFD 573
I + SMI YA +G GK+ + + + M + G KP +T+L L C+H G+V++G F
Sbjct: 399 LISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFK 458
Query: 574 SMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNE 633
+ + + H++C+VDL RAG + + ++L +C H
Sbjct: 459 DLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEV 518
Query: 634 EVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
+ + ++E DD ++ SN YA G + + E+R + + ++ G S +++
Sbjct: 519 SIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKV 578
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 217/481 (45%), Gaps = 42/481 (8%)
Query: 244 TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
T +L+ C N + + + I++ F + + FV L+ S + A F
Sbjct: 31 TLISVLRSCKN---IAHVPSIHAKIIRT-FHDQDAFVVFELIRVCSTLDSVDYAYDVFSY 86
Query: 304 IPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLG 363
+ NV + +++ + D + L+ M P + +L +C ++ +
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVC 142
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH 423
++IH LKLGF S ++++YGK ++ ++ +F+ + R ++ S
Sbjct: 143 REIHAQVLKLGFG-SSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSE 201
Query: 424 CGATQDVVELF-----------GLMIDEGL-----MPDEVTFSTTLKALSVSASATFTS- 466
CG ++ +ELF MID GL M + ++ +VSA+ FT+
Sbjct: 202 CGFIKEALELFQDVKIKDTVCWTAMID-GLVRNKEMNKALELFREMQMENVSAN-EFTAV 259
Query: 467 --------------SQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP 512
+ +H F +E V +L++ YSRCG + + ++F +
Sbjct: 260 CVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDK 319
Query: 513 NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILF 572
+ I + +MI+G A +G + + MV +G +P+++T + L C+H G++ G +F
Sbjct: 320 DVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVF 379
Query: 573 DSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKN 632
+SMK V V+P H+ C+VDLL R G P + D M +LL +C+ H N
Sbjct: 380 NSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN 439
Query: 633 EEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIE 692
E+G + A+ L E + D ++ SN YA G + S EIRE + +E G S+IE
Sbjct: 440 MELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499
Query: 693 I 693
+
Sbjct: 500 V 500
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 190/446 (42%), Gaps = 40/446 (8%)
Query: 163 VHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGC 222
+H ++++ + FV L+ + + A ++F + N+ ++ ++ GF G
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 223 VEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVAN 282
+ ++ Y RM + V P+ +LK C L +++ + +LK+GF S V
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSR-SVGL 162
Query: 283 ALVDFYSACGCLVGAKKSFEAIP-------------------------------VENVIS 311
+++ Y G LV AKK F+ +P +++ +
Sbjct: 163 KMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVC 222
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
W +++ N + ALELF MQ+ S + + V +L++CS + LG+ +H
Sbjct: 223 WTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVE 282
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVV 431
E S +ALI+MY +C DI + VF + + + N++++ L+ GA+ + +
Sbjct: 283 NQRM-ELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAI 341
Query: 432 ELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMD 491
F M++ G P++VT L A S ++ + VE ++D
Sbjct: 342 NEFRDMVNRGFRPNQVTLVALLNACS-HGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVD 400
Query: 492 AYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEI 550
R G +E + + E + P+ I ++++ +G + G + + E PD
Sbjct: 401 LLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE-NPDSG 459
Query: 551 TFLCALTGCNHTGMVKEGRILFDSMK 576
T++ +G KE + +SM+
Sbjct: 460 TYVLLSNLYASSGKWKESTEIRESMR 485
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 190/470 (40%), Gaps = 82/470 (17%)
Query: 72 NPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGE 131
NP+ +YT ID F+ S ++++H M + N +I
Sbjct: 89 NPNVYLYTA--MIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVI---------------- 130
Query: 132 MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
TS + L VC ++H +V+K GF S+ VG ++ Y G
Sbjct: 131 --------TSVLKACDLKVCR---------EIHAQVLKLGFGSSRSVGLKMMEIYGKSGE 173
Query: 192 REVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYS-------------------- 231
A+++FDE+P+R+ V++ + E G ++E+L +
Sbjct: 174 LVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRN 233
Query: 232 -----------RMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
M + V N T +L CS+ L G+ + S + SN FV
Sbjct: 234 KEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSN-FV 292
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
NAL++ YS CG + A++ F + ++VIS+N+++S A + +A+ F M G
Sbjct: 293 GNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGF 352
Query: 341 SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD-EGSVHAQSALIDMYGKCSDIESS 399
P+ +LV LLN+CS + +G ++ +++K F+ E + ++D+ G+ +E +
Sbjct: 353 RPNQVTLVALLNACSHGGLLDIGLEVF-NSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA 411
Query: 400 VAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
E++ + S ++ E + E PD T+ L L S
Sbjct: 412 YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTY-VLLSNLYAS 470
Query: 460 ASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL 509
+ S+++ SG+E + C +E+ QI E L
Sbjct: 471 SGKWKESTEIRESMR-DSGIEKEPG-----------CSTIEVDNQIHEFL 508
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 167/320 (52%), Gaps = 7/320 (2%)
Query: 375 FDEGS---VHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVV 431
FDE S V +A+I Y + D+++++ +F+S+ ++ + ++++ S G + +
Sbjct: 140 FDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEAL 199
Query: 432 ELFGLM-IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLM 490
++F M D+ + P+ +T + L A + + L +A ++G + V + +
Sbjct: 200 KMFLCMEKDKSVKPNHITVVSVLPA--CANLGELEIGRRLEGYARENGFFDNIYVCNATI 257
Query: 491 DAYSRCGHVELSLQIFETLSSPNAIC-FTSMINGYARNGMGKQGLAVLHAMVEKGLKPDE 549
+ YS+CG ++++ ++FE L + +C + SMI A +G + L + M+ +G KPD
Sbjct: 258 EMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDA 317
Query: 550 ITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXX 609
+TF+ L C H GMV +G+ LF SM+ VH + P H+ CM+DLL R G
Sbjct: 318 VTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIK 377
Query: 610 QTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDA 669
P K D +W +LL +C H N E+ A++ L +L+P +P + SN YA +D
Sbjct: 378 TMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDG 437
Query: 670 SREIREVALARKMTREIGHS 689
+R++ MT+ G+S
Sbjct: 438 VLRMRKLMKKETMTKAAGYS 457
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 156/337 (46%), Gaps = 36/337 (10%)
Query: 108 TVTYNLLISAWCF--PPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHC 165
T YN LI A+ P +++ LY + G+R + TF+ + A A R +H
Sbjct: 47 TFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHS 106
Query: 166 RVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEE 225
+ + GF S+ F TL+ Y +G AR +FDE+ +R++ VWN ++ G+ G ++
Sbjct: 107 QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKA 166
Query: 226 SLNYYSRM-----------------------------CFD---GVEPNGVTFCYLLKVCS 253
++ + M C + V+PN +T +L C+
Sbjct: 167 AMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACA 226
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISW 312
N L G++L+ + GF + NI+V NA ++ YS CG + AK+ FE + + N+ SW
Sbjct: 227 NLGELEIGRRLEGYARENGFFD-NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSW 285
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALK 372
NS++ A + +AL LF M G+ P + VGLL +C + G+++ +
Sbjct: 286 NSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEE 345
Query: 373 LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR 409
+ + +ID+ G+ ++ + + +++ +
Sbjct: 346 VHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMK 382
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 175/373 (46%), Gaps = 47/373 (12%)
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
AR+LFD ++N L++ + ES+ Y+ + FDG+ P+ TF ++ ++
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 255 HRRLNEGKKLQSCILKMGFVESNIF-------------------------------VANA 283
+ L S + GF ES+ F V NA
Sbjct: 95 FSSARPLRLLHSQFFRSGF-ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNA 153
Query: 284 LVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQL-WGQSP 342
++ Y G + A + F+++P +NV SW +++S + N +AL++F M+ P
Sbjct: 154 MITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKP 213
Query: 343 SVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAV 402
+ ++V +L +C+ E+ +G+++ +A + GF + +++ +A I+MY KC I+ + +
Sbjct: 214 NHITVVSVLPACANLGELEIGRRLEGYARENGFFD-NIYVCNATIEMYSKCGMIDVAKRL 272
Query: 403 FESL-TKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA-----L 456
FE L +R L NS++ SL+ G + + LF M+ EG PD VTF L A +
Sbjct: 273 FEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGM 332
Query: 457 SVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAI 515
V F S + +H + K G ++D R G ++ + + +T+ P+A+
Sbjct: 333 VVKGQELFKSMEEVHKISPKLEHYG------CMIDLLGRVGKLQEAYDLIKTMPMKPDAV 386
Query: 516 CFTSMINGYARNG 528
+ +++ + +G
Sbjct: 387 VWGTLLGACSFHG 399
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 136/325 (41%), Gaps = 41/325 (12%)
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSH 423
KQ+H H L+ G DE Q L+ ++ + +F+ N L+ +
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLL-----IPNLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 424 CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDA 483
+ + L+ L+ +GL P TF+ + ++ ++ +LLH +SG E D+
Sbjct: 60 HHQPHESIVLYNLLSFDGLRPSHHTFN--FIFAASASFSSARPLRLLHSQFFRSGFESDS 117
Query: 484 AVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMV-- 541
+L+ AY++ G + + ++F+ +S + + +MI GY R G K + + +M
Sbjct: 118 FCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 542 ------------------------------EKGLKPDEITFLCALTGCNHTGMVKEGRIL 571
+K +KP+ IT + L C + G ++ GR L
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 572 FDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSH- 630
+ +G + + +++ + G + ++R+ W+S++ S +H
Sbjct: 238 -EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 631 KNEEVGTRAAQVLVELDPDDPAVWL 655
K++E T AQ+L E + D ++
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFV 321
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 17/366 (4%)
Query: 340 QSPSVRSLVGLL-----NSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
QSPS +L +S +A + G+QIH KLGF+ + Q++L+ Y
Sbjct: 57 QSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFN-AVIQIQTSLVGFYSSVG 114
Query: 395 DIESSVAVF-ESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL 453
D++ + VF E+ K+ + +++++ + + + +ELF M E + D V + L
Sbjct: 115 DVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVAL 174
Query: 454 KALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPN 513
A + + K + D + SL++ Y + G E + ++F+ +
Sbjct: 175 SACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKD 234
Query: 514 AICFTSMINGYARNGMGKQGLAVLHAMV------EKGLKPDEITFLCALTGCNHTGMVKE 567
+TSMI GYA NG ++ L + M + + P+++TF+ L C+H+G+V+E
Sbjct: 235 VTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEE 294
Query: 568 GRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSC 627
G+ F SM + ++P + HF CMVDL CR+G Q P K + +W +LL +C
Sbjct: 295 GKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGAC 354
Query: 628 RSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIG 687
H N E+G + + ELD D ++ SN YA G +D ++R+ R+M G
Sbjct: 355 SLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRMP---G 411
Query: 688 HSSIEI 693
S IE+
Sbjct: 412 KSWIEL 417
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 123/234 (52%), Gaps = 11/234 (4%)
Query: 143 TFSSVLAV---CARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
+FS + A+ A+ +G Q+H V K GF + + + +LVGFY +VG + AR++F
Sbjct: 64 SFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVF 123
Query: 200 DELPER-NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
DE PE+ N+ +W ++ + E E++ + RM + +E +GV L C++ +
Sbjct: 124 DETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAV 183
Query: 259 NEGKKLQS-CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
G+++ S I + + ++ + N+L++ Y G A+K F+ ++V ++ S++
Sbjct: 184 QMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIF 243
Query: 318 VNADNDLLCDALELFTVMQLWGQS------PSVRSLVGLLNSCSRAEEIGLGKQ 365
A N ++LELF M+ QS P+ + +G+L +CS + + GK+
Sbjct: 244 GYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKR 297
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 200/423 (47%), Gaps = 10/423 (2%)
Query: 273 FVESNIFVANALVDFYSACGCLVGAKKS-FEAIPVENVISWNSLVSVNADNDLLCDALEL 331
F+ SN+ +++ LV YS L S F +P N+ SWN ++ + + +++L
Sbjct: 61 FLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDL 120
Query: 332 FTVMQLWGQS---PSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALID 388
F +++W +S P +L +L +CS + E G IH LKLGF S+ SAL+
Sbjct: 121 F--LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSS-SLFVSSALVI 177
Query: 389 MYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVT 448
MY + + +F+ + R ++ G + +F M G D V
Sbjct: 178 MYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVV 237
Query: 449 FSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFET 508
+ L A + S +H + ++ + ++ D Y +C ++ + +F
Sbjct: 238 MVSLLMACGQLGALKHGKS--VHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVN 295
Query: 509 LSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
+S + I ++S+I GY +G + M+++G++P+ +TFL L+ C H G+V++
Sbjct: 296 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKS 355
Query: 569 RILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCR 628
+ F M+ + + P+ +H++ + D + RAG P K D + ++L C+
Sbjct: 356 WLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCK 414
Query: 629 SHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGH 688
+ N EVG R A+ L++L P + ++ + Y+ G FD + +R+ +++++ G
Sbjct: 415 VYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGC 474
Query: 689 SSI 691
SSI
Sbjct: 475 SSI 477
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 8/268 (2%)
Query: 95 SALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLG-IRETSTTFSSVLAVC 151
++L+VF MP R+ ++N++I + +++ L+ M +R T +L C
Sbjct: 85 TSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRAC 144
Query: 152 ARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWN 211
+ S + G +H +K GF S++FV LV Y+++G AR+LFD++P R+ ++
Sbjct: 145 SASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYT 204
Query: 212 VLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQS-CILK 270
+ G+ + G L + M + G + V LL C L GK + CI +
Sbjct: 205 AMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRR 264
Query: 271 MGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLV-SVNADNDLLCDAL 329
+ N+ NA+ D Y C L A F + +VISW+SL+ D D++ +
Sbjct: 265 CSCLGLNL--GNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVM-SF 321
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRA 357
+LF M G P+ + +G+L++C+
Sbjct: 322 KLFDEMLKEGIEPNAVTFLGVLSACAHG 349
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 3/236 (1%)
Query: 74 SDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHL--YGE 131
S ++ + + ++ L A +F MP+RD+V Y + + E L L + E
Sbjct: 166 SSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFRE 225
Query: 132 MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
MG G S S+L C + G + G VH ++ + +G + Y+ +
Sbjct: 226 MGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSI 285
Query: 192 REVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKV 251
+ A +F + R++ W+ L+ G+ G V S + M +G+EPN VTF +L
Sbjct: 286 LDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSA 345
Query: 252 CSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
C+ H L E L +++ + + ++ D S G L A+K E +PV+
Sbjct: 346 CA-HGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVK 400
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 209/442 (47%), Gaps = 18/442 (4%)
Query: 262 KKLQSCILKMGFVESNIFVANALVD--FYSACGCLVGAKKSFEAIPVENVISWNSLVSVN 319
K+LQS L G +S+ F+ + L++ S G L A + F IP WN+++
Sbjct: 20 KQLQSHFLTAGHFQSS-FLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGF 78
Query: 320 ADNDLLCDALELFTVMQLWGQSPSVRSLVG------LLNSCSRAEEIGLGKQIHCHALKL 373
A + A + M S S V L +C+RA Q+HC +
Sbjct: 79 AGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRR 138
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVEL 433
G S+ + L+D Y K D+ S+ +F+ + R + N+L+ L + +EL
Sbjct: 139 GLSADSLLC-TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMEL 197
Query: 434 FGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAY 493
+ M EG+ EVT L A S + H ++ + + +AA+ D Y
Sbjct: 198 YKRMETEGIRRSEVTVVAALGACSHLGDVK-EGENIFHGYSNDNVIVSNAAI-----DMY 251
Query: 494 SRCGHVELSLQIFETLSSPNAIC-FTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
S+CG V+ + Q+FE + ++ + +MI G+A +G + L + + + G+KPD++++
Sbjct: 252 SKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSY 311
Query: 553 LCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTP 612
L ALT C H G+V+ G +F++M + GV+ + +H+ C+VDLL RAG
Sbjct: 312 LAALTACRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMS 370
Query: 613 DKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASRE 672
D +W SLL + + + E+ A++ + E+ ++ ++ SN YA G +
Sbjct: 371 MIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGR 430
Query: 673 IREVALARKMTREIGHSSIEIR 694
+R+ ++++ + G S IE +
Sbjct: 431 VRDDMESKQVKKIPGLSYIEAK 452
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 14/281 (4%)
Query: 92 DLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYGEMGLLGI------RETSTT 143
DL+ A+ +F +P T +N +I + P A Y M R + T
Sbjct: 52 DLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALT 111
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
S L CAR+ Q+HC++ + G ++ + TL+ Y G A +LFDE+P
Sbjct: 112 CSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMP 171
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKK 263
R++A WN L+ G E++ Y RM +G+ + VT L CS+ + EG+
Sbjct: 172 VRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN 231
Query: 264 LQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP-VENVISWNSLVSVNADN 322
+ G+ N+ V+NA +D YS CG + A + FE ++V++WN++++ A +
Sbjct: 232 IFH-----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
Query: 323 DLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLG 363
ALE+F ++ G P S + L +C A + G
Sbjct: 287 GEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 15/240 (6%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCF--PPEQALHLYGEMGLLGIRETS 141
+DA+ K+ DL SA +F MP+RD ++N LI+ +A+ LY M GIR +
Sbjct: 151 LDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSE 210
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLS-NVFVGGTLVGFYLNVGLREVARELFD 200
T + L C+ G +EG + G+ + NV V + Y G + A ++F+
Sbjct: 211 VTVVAALGACSHLGDVKEGENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFE 265
Query: 201 ELP-ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLN 259
+ ++++ WN ++ GF G +L + ++ +G++P+ V++ L C + +
Sbjct: 266 QFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVE 325
Query: 260 EGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKK---SFEAIPVENVISWNSLV 316
G + + + G VE N+ +VD S G L A S IP + + W SL+
Sbjct: 326 YGLSVFNNMACKG-VERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIP--DPVLWQSLL 382
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 161/346 (46%), Gaps = 18/346 (5%)
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSL 421
+G+ +H KLGF S + L+ Y K D+ + VF+ + +RT N+++
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 422 -SHCGA----TQDVVELFGLM--IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFA 474
SH + + LF G+ P + T L A +S + L+H +
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSA--ISQTGLLEIGSLVHGYI 246
Query: 475 LKSGV--EGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQ 532
K G E D + +L+D YS+CG + + +FE + N +TSM G A NG G +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 533 GLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMV 592
+L+ M E G+KP+EITF L+ H G+V+EG LF SMK+ GV P H+ C+V
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 593 DLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPA 652
DLL +AG P K D + SL +C + +G + L+E++ +D
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEK 426
Query: 653 V-------WLQASNFYAEIGNFDASREIREVALARKMTREIGHSSI 691
+ ++ SN A G + ++R+ R++ G+S +
Sbjct: 427 LSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 144/323 (44%), Gaps = 28/323 (8%)
Query: 97 LAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMG----LLGIRETSTTFSSVLAVCA 152
L VF D +N L+ C PE ++ ++ LL + E TF VL CA
Sbjct: 64 LLVFPRFGHPDKFLFNTLLK--CSKPEDSIRIFANYASKSSLLYLNER--TFVFVLGACA 119
Query: 153 RSGFH---REGVQVHCRVVKFGFL-SNVFVGGTLVGFYLNVGLREVARELFDELPERNLA 208
RS R G VH V K GFL + +G TL+ FY G AR++FDE+PER
Sbjct: 120 RSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSV 179
Query: 209 VWNVLLRGFCELGCVEESLNYYSRM----------CFDGVEPNGVTFCYLLKVCSNHRRL 258
WN ++ G+C ++ N+ +R C GV P T +L S L
Sbjct: 180 TWNAMIGGYCSH---KDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLL 236
Query: 259 NEGKKLQSCILKMGFV-ESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVS 317
G + I K+GF E ++F+ ALVD YS CGCL A FE + V+NV +W S+ +
Sbjct: 237 EIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMAT 296
Query: 318 VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDE 377
A N + L M G P+ + LL++ + G ++ ++K F
Sbjct: 297 GLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELF-KSMKTRFGV 355
Query: 378 GSV-HAQSALIDMYGKCSDIESS 399
V ++D+ GK I+ +
Sbjct: 356 TPVIEHYGCIVDLLGKAGRIQEA 378
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 104/232 (44%), Gaps = 11/232 (4%)
Query: 87 FIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLL---------GI 137
+ K+ DL A VF MP R +VT+N +I +C ++ H + +L G+
Sbjct: 157 YAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGV 216
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLS--NVFVGGTLVGFYLNVGLREVA 195
R T TT VL+ +++G G VH + K GF +VF+G LV Y G A
Sbjct: 217 RPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNA 276
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
+F+ + +N+ W + G G E+ N +RM G++PN +TF LL +
Sbjct: 277 FSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHI 336
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE 307
+ EG +L + V I +VD G + A + A+P++
Sbjct: 337 GLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK 388
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 178/423 (42%), Gaps = 44/423 (10%)
Query: 312 WNSLVSV---NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHC 368
WN ++ N + + ++ M+ SP + LL S + LG++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 369 HALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQ 428
L G D+ +++L++MY C D+ S+ VF+ + L NS++ + + G
Sbjct: 87 QILLFGLDKDPF-VRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 429 DVVELFGLMIDEGLM------------------------------------PDEVTFSTT 452
D +LF M + ++ P+E T ST
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 453 LKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP 512
L A + +H + K VE D + +L+D Y++CG +E + ++F L S
Sbjct: 206 LSA--CGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 513 NAI-CFTSMINGYARNGMGKQGLAVLHAMV-EKGLKPDEITFLCALTGCNHTGMVKEGRI 570
+ +++MI A G+ + + M + P+ +TF+ L C H G++ EG+
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 571 LFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSH 630
F M G+ P +H+ CMVDL R+G P + D +W SLL R
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 631 KNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSS 690
+ + A + L+ELDP + ++ SN YA+ G + + IR + + + G S
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 691 IEI 693
+E+
Sbjct: 444 VEV 446
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 124/247 (50%), Gaps = 10/247 (4%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAW--CFPPEQALHLYGEMGLLG-- 136
N ++A+ K+ ++ A +F MP R+ ++++ LI+ + C ++AL L+ EM L
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 137 ---IRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLRE 193
+R T S+VL+ C R G +G VH + K+ ++ +G L+ Y G E
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 194 VARELFDEL-PERNLAVWNVLLRGFCELGCVEESLNYYSRMCF-DGVEPNGVTFCYLLKV 251
A+ +F+ L ++++ ++ ++ G +E +S M D + PN VTF +L
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 252 CSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVI 310
C + +NEGK +++ + +I +VD Y G + A+ ++P+E +V+
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 311 SWNSLVS 317
W SL+S
Sbjct: 372 IWGSLLS 378
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 168/372 (45%), Gaps = 33/372 (8%)
Query: 48 PLMQQRHQSL-SFSF---IRA--QTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFH 101
P+ RH L SF + IRA ++P+ ++ I +++ R+ + FH
Sbjct: 13 PIFHIRHLKLESFLWNIIIRAIVHNVSSPQ--------RHSPISVYLRMRN-HRVSPDFH 63
Query: 102 TMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGV 161
T P +N L P Q H ++ L G+ + +S+L + + G R
Sbjct: 64 TFPFLLPSFHNPL----HLPLGQRTH--AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQ 117
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
RV ++ ++V Y GL + AR+LFDE+PERN+ W+ L+ G+ G
Sbjct: 118 ----RVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCG 173
Query: 222 CVEESLNYYSRMCFDG-----VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVES 276
+E+L+ + M V PN T +L C L +GK + + I K VE
Sbjct: 174 KYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKY-HVEI 232
Query: 277 NIFVANALVDFYSACGCLVGAKKSFEAI-PVENVISWNSLVSVNADNDLLCDALELFTVM 335
+I + AL+D Y+ CG L AK+ F A+ ++V ++++++ A L + +LF+ M
Sbjct: 233 DIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEM 292
Query: 336 QLWGQ-SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
+P+ + VG+L +C I GK ++ S+ ++D+YG+
Sbjct: 293 TTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSG 352
Query: 395 DIESSVAVFESL 406
I+ + + S+
Sbjct: 353 LIKEAESFIASM 364
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 165/376 (43%), Gaps = 45/376 (11%)
Query: 209 VWNVLLRGFCELGCVEE---SLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQ 265
+WN+++R + ++ Y RM V P+ TF +LL N L G++
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 266 SCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLL 325
+ IL G ++ + FV +L++ YS+CG L A++ F+ +++ +WNS+V+ A L+
Sbjct: 86 AQILLFG-LDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 326 CD-------------------------------ALELFTVMQLWGQS-----PSVRSLVG 349
D AL+LF MQL + P+ ++
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 350 LLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESL-TK 408
+L++C R + GK +H + K E + +ALIDMY KC +E + VF +L +K
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHV-EIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 409 RTLECCNSLMTSLSHCGATQDVVELFGLM-IDEGLMPDEVTFSTTLKALSVSASATFTSS 467
+ ++ ++++ L+ G T + +LF M + + P+ VTF L A V
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA-CVHRGLINEGK 322
Query: 468 QLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYAR 526
+ G+ ++D Y R G ++ + ++ P+ + + S+++G
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRM 382
Query: 527 NGMGKQGLAVLHAMVE 542
G K L ++E
Sbjct: 383 LGDIKTCEGALKRLIE 398
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 169/356 (47%), Gaps = 39/356 (10%)
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG------ 425
KLGF E V+ Q+AL+ MY ++ + VF+ + +R N ++T L++ G
Sbjct: 151 KLGF-ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKAL 209
Query: 426 -------------------------ATQDVVELFGLMID-EGLMPDEVTFSTTLKALSVS 459
++ + LF M+ + + P+E+T L A+
Sbjct: 210 CFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNL 269
Query: 460 ASATFTSSQLLHCFALKSG-VEGDAAVACSLMDAYSRCGHVELSLQIFETLSS--PNAIC 516
S +H + K G V D V SL+DAY++CG ++ + + F + + N +
Sbjct: 270 GDLKMCGS--VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVS 327
Query: 517 FTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRI-LFDSM 575
+T+MI+ +A +GMGK+ +++ M GLKP+ +T + L C+H G+ +E + F++M
Sbjct: 328 WTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM 387
Query: 576 KSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEV 635
+ + + PD +H+ C+VD+L R G + P + +W LL +C + + E+
Sbjct: 388 VNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAEL 447
Query: 636 GTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSI 691
R + L+EL+ ++ SN + G F ++ R+ R + + GHS +
Sbjct: 448 AERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 37/228 (16%)
Query: 169 KFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLN 228
K GF S+V+V LVG YL G A ++FDE+PERN WNV++ G LG E++L
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 229 Y-------------------------------YSRMCF-DGVEPNGVTFCYLLKVCSNHR 256
+ +SRM D ++PN +T +L N
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP--VENVISWNS 314
L + + + K GFV +I V N+L+D Y+ CGC+ A K F IP +N++SW +
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSR---AEE 359
++S A + + +A+ +F M+ G P+ +++ +LN+CS AEE
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEE 378
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 128/301 (42%), Gaps = 37/301 (12%)
Query: 241 NGVTFCYLLKVCSNHR--RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAK 298
+ T+ +LLK SN R L G L LK+GF ES+++V ALV Y G ++ A
Sbjct: 120 DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGF-ESHVYVQTALVGMYLVGGNMIDAH 178
Query: 299 KSFEAIPVEN-------------------------------VISWNSLVSVNADNDLLCD 327
K F+ +P N V+SW +++ A D +
Sbjct: 179 KVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKE 238
Query: 328 ALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSAL 386
A+ LF+ M P+ +++ +L + ++ + +H + K GF + ++L
Sbjct: 239 AILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSL 298
Query: 387 IDMYGKCSDIESSVAVFESLT--KRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMP 444
ID Y KC I+S+ F + ++ L +++++ + G ++ V +F M GL P
Sbjct: 299 IDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKP 358
Query: 445 DEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQ 504
+ VT + L A S A + + + + D L+D R G +E + +
Sbjct: 359 NRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEK 418
Query: 505 I 505
I
Sbjct: 419 I 419
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 17/266 (6%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCF--PPEQALHL 128
RNP T N I D AL MP R V++ +I + P++A+ L
Sbjct: 187 RNP----VTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILL 242
Query: 129 YGEM-GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLS-NVFVGGTLVGFY 186
+ M I+ T ++L G + VH V K GF+ ++ V +L+ Y
Sbjct: 243 FSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAY 302
Query: 187 LNVGLREVARELFDELP--ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
G + A + F E+P +NL W ++ F G +E+++ + M G++PN VT
Sbjct: 303 AKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVT 362
Query: 245 FCYLLKVCSNHRRLNEGKKLQ--SCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFE 302
+L CS H L E + L+ + ++ + ++ LVD G L A+K
Sbjct: 363 MISVLNACS-HGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIAL 421
Query: 303 AIPV-ENVISWNSLV---SVNADNDL 324
IP+ E + W L+ SV D +L
Sbjct: 422 EIPIEEKAVVWRMLLGACSVYDDAEL 447
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 135/251 (53%), Gaps = 5/251 (1%)
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVEL 501
+ P++ +F+++L A + ++ +H + SG+E +A ++ +L+D Y++CG +
Sbjct: 161 IKPNKFSFASSLAA--CARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGT 218
Query: 502 SLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNH 561
S ++F ++ + + +MI G+A +G+ + + V M + + PD ITFL LT C+H
Sbjct: 219 SREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSH 278
Query: 562 TGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWS 621
G+++EG+ F M +QP H+ MVDLL RAG P + D +W
Sbjct: 279 CGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWR 338
Query: 622 SLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARK 681
SLL S R++KN E+G A Q L + D ++ SN Y+ +++++++RE+
Sbjct: 339 SLLSSSRTYKNPELGEIAIQNLSKAKSGD---YVLLSNIYSSTKKWESAQKVRELMSKEG 395
Query: 682 MTREIGHSSIE 692
+ + G S +E
Sbjct: 396 IRKAKGKSWLE 406
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 4/241 (1%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWC--FPPEQALH-LYGEMGLLGI 137
N I++ +K + A V ++ +T+NL+I + E+AL L + I
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
+ +F+S LA CAR G VH ++ G N + LV Y G +RE
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 198 LFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
+F + ++++WN ++ GF G E++ +S M + V P+ +TF LL CS+
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLV 316
L EGK+ + + ++ + A+VD G + A + E++P+E +V+ W SL+
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 317 S 317
S
Sbjct: 342 S 342
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 113/221 (51%), Gaps = 2/221 (0%)
Query: 187 LNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM-CFDGVEPNGVTF 245
+ +G +A+++ ++N+ WN+++ G+ EE+L M F ++PN +F
Sbjct: 109 MKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSF 168
Query: 246 CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
L C+ L+ K + S ++ G +E N +++ALVD Y+ CG + +++ F ++
Sbjct: 169 ASSLAACARLGDLHHAKWVHSLMIDSG-IELNAILSSALVDVYAKCGDIGTSREVFYSVK 227
Query: 306 VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQ 365
+V WN++++ A + L +A+ +F+ M+ SP + +GLL +CS + GK+
Sbjct: 228 RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE 287
Query: 366 IHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESL 406
+ + + A++D+ G+ ++ + + ES+
Sbjct: 288 YFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESM 328
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 108/240 (45%), Gaps = 28/240 (11%)
Query: 297 AKKSFEAIPVENVISWNSLVSVNADNDLLCDALE-LFTVMQLWGQSPSVRSLVGLLNSCS 355
AKK +NVI+WN ++ N +AL+ L ++ P+ S L +C+
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 356 RAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCN 415
R ++ K +H + G + ++ SAL+D+Y KC DI +S VF S+ + + N
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAI-LSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 416 SLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFAL 475
+++T + G + + +F M E + PD +TF L S HC L
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCS-------------HCGLL 282
Query: 476 KSGVEGDAAVA------------CSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMIN 522
+ G E ++ +++D R G V+ + ++ E++ P+ + + S+++
Sbjct: 283 EEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 179/400 (44%), Gaps = 33/400 (8%)
Query: 328 ALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALI 387
AL + + +G P + V L++ + + GK H A+K G D+ + Q++L+
Sbjct: 102 ALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQ-VLPVQNSLM 160
Query: 388 DMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEV 447
MY C ++ + +F + KR + NS++ + G +LF M D+ ++ +
Sbjct: 161 HMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNI 220
Query: 448 TFSTTLKA----LSVS-------------------------ASATFTSSQLLHCFALKSG 478
S L A +S+S SA + +H +++
Sbjct: 221 MISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF 280
Query: 479 VEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLH 538
+ + +L+D Y +C V L+ +IF++LS N + + MI + +G + GL +
Sbjct: 281 LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFE 340
Query: 539 AMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRA 598
AM+ L+PDE+TF+ L GC G+V +G+ + M ++P+ H CM +L A
Sbjct: 341 AMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSA 400
Query: 599 GXXXXXXXXXXQTPDKR---DCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAVWL 655
G PD+ + W++LL S R N +G A+ L+E DP + +
Sbjct: 401 GFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYH 460
Query: 656 QASNFYAEIGNFDASREIREVALARKMTREIGHSSIEIRQ 695
N Y+ G ++ +RE+ RK+ R G +++++
Sbjct: 461 LLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKE 500
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 128/276 (46%), Gaps = 37/276 (13%)
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILK 270
N + + + +++L +Y + G P+ TF L+ ++ GK +K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 271 MGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALE 330
G + + V N+L+ Y+ CG L AKK F IP +++SWNS+++ N + A +
Sbjct: 147 HG-CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 331 LFTVMQ--------------LWGQSPSVR-----------------SLVGLLNSCSRAEE 359
LF M L +P V +LV LLN+C R+
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 360 IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMT 419
+ G+ +H ++ F SV +ALIDMYGKC ++ + +F+SL+ R N ++
Sbjct: 266 LKEGRSVHASLIRT-FLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI- 323
Query: 420 SLSHC--GATQDVVELFGLMIDEGLMPDEVTFSTTL 453
L+HC G + +ELF MI+ L PDEVTF L
Sbjct: 324 -LAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVL 358
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYG 130
P + + N I +++ D+ +A +F MP ++ +++N++ISA+ P ++ L+
Sbjct: 180 PKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFR 239
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
EM G + +T +L C RS +EG VH +++ S+V + L+ Y
Sbjct: 240 EMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCK 299
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
+AR +FD L RN WNV++ C G E L + M + P+ VTF +L
Sbjct: 300 EVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLC 359
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV- 309
C+ +++G+ S ++ ++ N + + YS+ G A+++ + +P E+V
Sbjct: 360 GCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVT 419
Query: 310 ---ISWNSLVS 317
W +L+S
Sbjct: 420 PESTKWANLLS 430
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 123/277 (44%), Gaps = 32/277 (11%)
Query: 122 PEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGT 181
P+QAL Y ++ G S TF S+++ ++ G H + +K G + V +
Sbjct: 99 PKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNS 158
Query: 182 LVGFYLNVGLREVARELF-------------------------------DELPERNLAVW 210
L+ Y G ++A++LF DE+P++N+ W
Sbjct: 159 LMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISW 218
Query: 211 NVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILK 270
N+++ + S++ + M G + N T LL C RL EG+ + + +++
Sbjct: 219 NIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR 278
Query: 271 MGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALE 330
F+ S++ + AL+D Y C + A++ F+++ + N ++WN ++ + + LE
Sbjct: 279 T-FLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 331 LFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
LF M P + VG+L C+RA + G+ +
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYY 374
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 35/221 (15%)
Query: 386 LIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPD 445
L+ + D +V+++ S+ K L C N + + + + + + ++ G +PD
Sbjct: 60 LLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPD 117
Query: 446 EVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQI 505
TF + + + + S ++ H A+K G + V SLM Y+ CG ++L+ ++
Sbjct: 118 SYTFVSLISC--IEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 506 FETLSSPNAICFTSMINGYARNG---------------------------MGKQG----L 534
F + + + + S+I G RNG +G +
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 535 AVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSM 575
++ MV G + +E T + L C + +KEGR + S+
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 177/414 (42%), Gaps = 36/414 (8%)
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
+N+L+ +L LFT M P+ + L+ + + + G +H AL
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCG------ 425
K GF Q++ + YG+ D+ESS +F+ + + CNSL+ + G
Sbjct: 114 KRGF-LWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 426 ------ATQDVVE-------------------LFGLMIDEG---LMPDEVTFSTTLKALS 457
DVV +FG MI + P+E TF + L + +
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 458 VSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICF 517
+ +H + + + + +L+D Y + G +E++L IF+ + +
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 518 TSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKS 577
++I+ A NG KQ L + M + P+ IT L LT C + +V G LF S+ S
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 578 VHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGT 637
+ + P H+ C+VDL+ RAG P + D + +LL +C+ H+N E+G
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 638 RAAQVLVELDPDDPAVWLQASNFYAEIGNFDASREIREVALARKMTREIGHSSI 691
+ L+ L P ++ S F A N+ + ++R+ A+ R+I S+
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRK-AMIEAGIRKIPAYSV 465
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 39/294 (13%)
Query: 111 YNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVV 168
YN LI ++ E +L L+ M ++ + TF S++ S GV +H + +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 169 KFGFLSNVFVGGTLVGFYLNVGLREVARELFDE--------------------------- 201
K GFL + FV + V FY VG E +R++FD+
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 202 ----LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG---VEPNGVTFCYLLKVCSN 254
+P ++ W ++ GF + G ++L + M + + PN TF +L C+N
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 255 HRR--LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISW 312
+ + GK++ ++ + + + AL+D Y G L A F+ I + V +W
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTT-LGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 313 NSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQI 366
N+++S A N ALE+F +M+ P+ +L+ +L +C+R++ + LG Q+
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 9/243 (3%)
Query: 72 NPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLY 129
NP CV N +DA ++ +++ A F MP+ D V++ +I+ + +AL ++
Sbjct: 149 NP--CVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVF 206
Query: 130 GEM---GLLGIRETSTTFSSVLAVCAR--SGFHREGVQVHCRVVKFGFLSNVFVGGTLVG 184
GEM I TF SVL+ CA G R G Q+H V+ + +G L+
Sbjct: 207 GEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLD 266
Query: 185 FYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
Y G E+A +FD++ ++ + WN ++ G +++L + M V PNG+T
Sbjct: 267 MYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGIT 326
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
+L C+ + ++ G +L S I + +VD G LV A +++
Sbjct: 327 LLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSL 386
Query: 305 PVE 307
P E
Sbjct: 387 PFE 389
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 181/385 (47%), Gaps = 40/385 (10%)
Query: 247 YLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV 306
Y L+ CSN +L K++ + I+K + V L+ S+ G A F +
Sbjct: 25 YFLRTCSNFSQL---KQIHTKIIKHNLTNDQLLV-RQLISVSSSFGETQYASLVFNQLQS 80
Query: 307 ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVR-SLVGLLNSCSRAEEIGLGKQ 365
+ +WN ++ + N +AL LF +M + QS + + ++ +C + I LG Q
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 366 IHCHALKLGFDEGSVHAQSALIDMYGKC-------------------------------S 394
+H A+K GF V Q+ L+D+Y KC S
Sbjct: 141 VHGLAIKAGF-FNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNS 199
Query: 395 DIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
++S+ VF + R + +++T+ + +LF M + + P+E T L+
Sbjct: 200 QLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQ 259
Query: 455 ALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNA 514
A + S + + +H +A K+G D + +L+D YS+CG ++ + ++F+ + +
Sbjct: 260 ASTQLGS--LSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Query: 515 ICFTSMINGYARNGMGKQGLAVLHAMVEKG-LKPDEITFLCALTGCNHTGMVKEGRILFD 573
+ SMI +G G++ L++ M E+ ++PD ITF+ L+ C +TG VK+G F
Sbjct: 318 ATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFT 377
Query: 574 SMKSVHGVQPDQRHFSCMVDLLCRA 598
M V+G+ P + H +CM+ LL +A
Sbjct: 378 RMIQVYGISPIREHNACMIQLLEQA 402
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 156/347 (44%), Gaps = 44/347 (12%)
Query: 99 VFHTMPLRDTVTYNLLISAWCF--PPEQALHLYGEMGLLGIRETST----TFSSVLAVCA 152
VF+ + T T+NL+I + P +AL L+ L+ I S TF V+ C
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFI---LMMISHQSQFDKFTFPFVIKACL 130
Query: 153 RSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNV 212
S R G QVH +K GF ++VF TL+ Y G + R++FD++P R++ W
Sbjct: 131 ASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTT 190
Query: 213 LLRGFC---ELGCVE----------------------------ESLNYYSRMCFDGVEPN 241
+L G +L E E+ + RM D V+PN
Sbjct: 191 MLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPN 250
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
T LL+ + L+ G+ + K GFV + F+ AL+D YS CG L A+K F
Sbjct: 251 EFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFV-LDCFLGTALIDMYSKCGSLQDARKVF 309
Query: 302 EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ-SPSVRSLVGLLNSCSRAEEI 360
+ + +++ +WNS+++ + +AL LF M+ P + VG+L++C+ +
Sbjct: 310 DVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNV 369
Query: 361 GLGKQIHCHALKL-GFDEGSVHAQSALIDMYGKCSDIESSVAVFESL 406
G + +++ G H + +I + + ++E + + ES+
Sbjct: 370 KDGLRYFTRMIQVYGISPIREH-NACMIQLLEQALEVEKASNLVESM 415
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 150/327 (45%), Gaps = 35/327 (10%)
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELG 221
Q+H +++K ++ + L+ + G + A +F++L + WN+++R
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 222 CVEESLNYYSRMCFD-GVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
E+L + M + + TF +++K C + G ++ +K GF +++F
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFF-NDVFF 156
Query: 281 ANALVDFYSACGCLVGAKKSFEA-------------------------------IPVENV 309
N L+D Y CG +K F+ +P+ NV
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCH 369
+SW ++++ N +A +LF MQ+ P+ ++V LL + ++ + +G+ +H +
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 370 ALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQD 429
A K GF +ALIDMY KC ++ + VF+ + ++L NS++TSL G ++
Sbjct: 277 AHKNGFVLDCFLG-TALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEE 335
Query: 430 VVELFGLMIDEG-LMPDEVTFSTTLKA 455
+ LF M +E + PD +TF L A
Sbjct: 336 ALSLFEEMEEEASVEPDAITFVGVLSA 362
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 3/192 (1%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFP--PEQALHLYG 130
P + + + + + L+SA VF+ MP+R+ V++ +I+A+ P++A L+
Sbjct: 181 PGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFR 240
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
M + ++ T ++L + G G VH K GF+ + F+G L+ Y G
Sbjct: 241 RMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCG 300
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDG-VEPNGVTFCYLL 249
+ AR++FD + ++LA WN ++ GC EE+L+ + M + VEP+ +TF +L
Sbjct: 301 SLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVL 360
Query: 250 KVCSNHRRLNEG 261
C+N + +G
Sbjct: 361 SACANTGNVKDG 372
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 180/468 (38%), Gaps = 77/468 (16%)
Query: 123 EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL 182
E AL LY M G+ +L C G H +V++ G N+ V L
Sbjct: 140 ENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNEL 199
Query: 183 VGFYLNVGLREVARELFDELPERNLAVWNVLLRGF-----CE------------------ 219
+ Y G A LF E+P RN WNV+++GF CE
Sbjct: 200 LTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDE 259
Query: 220 ------------LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSC 267
G E+ L Y+ M G +G VC+ L+ +K+
Sbjct: 260 VTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGY 319
Query: 268 ILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCD 327
++K GF E + NAL+ Y G + A+ F I + + SWNSL++ D L +
Sbjct: 320 VIKGGF-EEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDE 378
Query: 328 ALELFTVMQLWGQSPSVRSLVG-------------------------------------- 349
AL LF+ ++ +V++ V
Sbjct: 379 ALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTIC 438
Query: 350 -LLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTK 408
+L+ C+ + LG++IH H ++ E ++ Q+AL++MY KC + VFE++
Sbjct: 439 CILSICAELPALNLGREIHGHVIRTSMSE-NILVQNALVNMYAKCGLLSEGSLVFEAIRD 497
Query: 409 RTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQ 468
+ L NS++ G + + +F MI G PD + L A S A +
Sbjct: 498 KDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACS-HAGLVEKGRE 556
Query: 469 LLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAIC 516
+ + + + G+E ++D R G ++ + +I + + +C
Sbjct: 557 IFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVC 604
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 181/433 (41%), Gaps = 50/433 (11%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLIS--AWCFPPEQALHLYGEMGL 134
N I F + D SA+ +F M D VT+ ++S + C E L + M +
Sbjct: 228 NVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRM 287
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
G + + +VCA +VH V+K GF + L+ Y G +
Sbjct: 288 SGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKD 347
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEE----------------------------- 225
A LF ++ + + WN L+ F + G ++E
Sbjct: 348 AEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIK 407
Query: 226 ----------SLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVE 275
SL Y+ +M F V N VT C +L +C+ LN G+++ +++ E
Sbjct: 408 GCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSE 467
Query: 276 SNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVM 335
NI V NALV+ Y+ CG L FEAI +++ISWNS++ + AL +F M
Sbjct: 468 -NILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM 526
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQI-HCHALKLGFDEGSVHAQSALIDMYGKCS 394
G P +LV +L++CS A + G++I + + + G + H + ++D+ G+
Sbjct: 527 ISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEH-YACIVDLLGRVG 585
Query: 395 DIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
++ + + +++ C L L+ C ++V G+ ++ E T S L
Sbjct: 586 FLKEASEIVKNMPMEPKVCV--LGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLL 643
Query: 455 ALSVSASATFTSS 467
+ SA + S
Sbjct: 644 SNIYSAGGRWEES 656
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 157/372 (42%), Gaps = 44/372 (11%)
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
F +LL +C ++ +++ + +L F+ + +A L+ Y+ G L+ A+ FE +
Sbjct: 59 FDHLLGLCLTAQQC---RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETV 115
Query: 305 PV---ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
+ ++ WNS++ N + L +ALEL+ M+ G + L +L +C G
Sbjct: 116 SLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFG 175
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSL 421
L + H +++G E ++H + L+ +Y K + + +F + R N ++
Sbjct: 176 LCRAFHTQVIQIGLKE-NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGF 234
Query: 422 SHCGATQDVVELFGLMIDEGLMPDEVTFSTTL-----------------------KALSV 458
S + V++F M E PDEVT+++ L A+S
Sbjct: 235 SQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSG 294
Query: 459 SASATFTS----------SQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFET 508
A A F S ++ +H + +K G E +L+ Y + G V+ + +F
Sbjct: 295 EALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQ 354
Query: 509 LSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEK----GLKPDEITFLCALTGCNHTGM 564
+ + + S+I + G + L++ + E +K + +T+ + GCN G
Sbjct: 355 IRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGR 414
Query: 565 VKEGRILFDSMK 576
+ F M+
Sbjct: 415 GDDSLEYFRQMQ 426
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/547 (21%), Positives = 237/547 (43%), Gaps = 64/547 (11%)
Query: 104 PLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGV 161
P + VT+ LI+ +C E +A L+ M GI +S+++ ++G G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL----PERNLAVWNVLLRGF 217
++ + + G +V V + + Y+ G A ++ + N+ + +L++G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 218 CELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESN 277
C+ G + E+ Y ++ G+EP+ VT+ L+ L G L ++KMG+ +
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY-PPD 460
Query: 278 IFVANALVDFYSACGCLVGA-----KKSFEAIPVENVISWNSLVSVNADNDLLCDALELF 332
+ + LVD S G ++ A K ++I + NV+ +NSL+ + +AL++F
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL-NVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 333 TVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGK 392
+M ++G P V + ++ + + K+G + ++ A LID + K
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL-AYCTLIDAFCK 578
Query: 393 CSDIESSVAVFESLTKRTLEC----CNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVT 448
+ +F+ + + + CN ++ L C +D + F +I+ + PD VT
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 449 FSTTL----------------KALSVS--ASATFTSSQLLHCFALKSGVEG--------- 481
++T + + L V+ T T + L+H + ++G
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 482 ------DAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGK 531
+A LMD +S+ +E S ++FE + SP+ + ++ +I+G + G
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 532 QGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCM 591
+ + H ++ L PD + + + G G + E +L++ M +GV+PD
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR-NGVKPD------- 810
Query: 592 VDLLCRA 598
DLL RA
Sbjct: 811 -DLLQRA 816
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 192/451 (42%), Gaps = 55/451 (12%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPPE--QALHLYGEMGLLGI 137
ID ++KS DL +A V+ M + + VTY +LI C +A +YG++ G+
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLR----E 193
+ T+SS++ + G R G ++ ++K G+ +V + G LV GL
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 194 VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
+ ++ + N+ V+N L+ G+C L +E+L + M G++P+ TF +++V
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 254 NHRRLNEGKKLQSCILKMGF----------------------------------VESNIF 279
RL E L + KMG + ++I
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIA 602
Query: 280 VANALVDFYSACGCLVGAKKSF----EAIPVENVISWNSLVSVNADNDLLCDALELFTVM 335
V N ++ C + A K F E +++++N+++ L +A +F ++
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD 395
++ P+ +L L++ + ++ ++ + G +V L+D + K D
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV-TYGCLMDWFSKSVD 721
Query: 396 IESSVAVFESLTKR----TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFST 451
IE S +FE + ++ ++ + ++ L G + +F ID L+PD V ++
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 781
Query: 452 TLKALSVSASATFTSSQLLHCFALKSGVEGD 482
++ + LL+ L++GV+ D
Sbjct: 782 LIRGY--CKVGRLVEAALLYEHMLRNGVKPD 810
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 170/394 (43%), Gaps = 41/394 (10%)
Query: 228 NYYSRMCFDGVEPNGVT---------FCY--LLKVCSNHRRLNEGK---KLQSC--ILKM 271
+++ ++C G+EP+GV+ FC + K HR + E + SC +LK
Sbjct: 202 DHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLK- 260
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALEL 331
G I VA+ L+ CG P NV+++ +L++ + A +L
Sbjct: 261 GLSVDQIEVASRLLSLVLDCG------------PAPNVVTFCTLINGFCKRGEMDRAFDL 308
Query: 332 FTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYG 391
F VM+ G P + + L++ +A +G+G ++ AL G + V S+ ID+Y
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV-KLDVVVFSSTIDVYV 367
Query: 392 KCSDIESSVAVFESL----TKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEV 447
K D+ ++ V++ + + L+ L G + ++G ++ G+ P V
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 448 TFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCG----HVELSL 503
T+S+ + S L+ +K G D + L+D S+ G + S+
Sbjct: 428 TYSSLIDGF--CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 504 QIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG 563
++ N + F S+I+G+ R + L V M G+KPD TF + G
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEG 545
Query: 564 MVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR 597
++E LF M + G++PD + ++D C+
Sbjct: 546 RLEEALFLFFRMFKM-GLEPDALAYCTLIDAFCK 578
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 26/227 (11%)
Query: 396 IESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVV-------------------ELFGL 436
I S V + L+ +E + L++ + CG +VV +LF +
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 437 MIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRC 496
M G+ PD + +ST + + L AL GV+ D V S +D Y +
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYF--KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369
Query: 497 GHVELSLQIFETL----SSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
G + + +++ + SPN + +T +I G ++G + + ++++G++P +T+
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 553 LCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+ G G ++ G L++ M + G PD + +VD L + G
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKM-GYPPDVVIYGVLVDGLSKQG 475
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 226/503 (44%), Gaps = 71/503 (14%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTM------PLRDTVTYNLLISAWCFPPE--QALHL 128
+YT + I+ F + L+ ALAV M P D VT N L++ +C A+ L
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLNSLLNGFCHGNRISDAVSL 173
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
G+M +G + S TF++++ R E V + R+V G ++ G +V
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 189 VGLREVARELFDELP----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
G ++A L ++ E + ++N ++ C V ++LN ++ M G+ PN VT
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
+ L++ N+ R ++ +L S +++ + N+ +AL+D + G LV A+K ++ +
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 305 PVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
++ +++SL++ +D L +A +F +M P+V + L+ +A+ +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
DEG + +F +++R L T+
Sbjct: 413 ---------------DEG---------------------MELFREMSQRGLVGNTVTYTT 436
Query: 421 LSH-------CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCF 473
L H C Q V F M+ +G++PD +T+S L L + ++ ++ +
Sbjct: 437 LIHGFFQARECDNAQIV---FKQMVSDGVLPDIMTYSILLDGL--CNNGKVETALVVFEY 491
Query: 474 ALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGM 529
+S +E D +++ + G VE +F +LS PN + +T+M++G+ R G+
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 530 GKQGLAVLHAMVEKGLKPDEITF 552
++ A+ M E+G PD T+
Sbjct: 552 KEEADALFREMKEEGPLPDSGTY 574
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/504 (20%), Positives = 210/504 (41%), Gaps = 50/504 (9%)
Query: 110 TYNLLISAWCFPPEQ--ALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRV 167
TY++LI+ +C + AL + +M LG T +S+L + V + ++
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 168 VKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP----ERNLAVWNVLLRGFCELGCV 223
V+ G+ + F TL+ A L D + + +L + +++ G C+ G +
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 224 EESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANA 283
+ +L+ +M +EP V + ++ N++ +N+ L F E +
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL--------FTEMD------ 283
Query: 284 LVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPS 343
K NV+++NSL+ + DA L + M +P+
Sbjct: 284 --------------NKGIRP----NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 344 VRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVF 403
V + L+++ + ++ ++++ +K D + S+LI+ + ++ + +F
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 404 ESLTKR----TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
E + + + N+L+ + +ELF M GL+ + VT++T + +
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 460 ASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAI 515
++Q++ + GV D L+D G VE +L +FE L P+
Sbjct: 445 RECD--NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 502
Query: 516 CFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSM 575
+ MI G + G + G + ++ KG+KP+ +T+ ++G G+ +E LF M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 576 KSVHGVQPDQRHFSCMVDLLCRAG 599
K G PD ++ ++ R G
Sbjct: 563 KE-EGPLPDSGTYNTLIRAHLRDG 585
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 38/206 (18%)
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVS------------------ASATFTSSQL 469
D V LFG M+ P V FS L A++ + +T S L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 470 LHCF---------------ALKSGVEGDAAVACSLMDAYSRCGH----VELSLQIFETLS 510
++CF +K G E D SL++ + V L Q+ E
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 511 SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRI 570
P++ F ++I+G R+ + +A++ MV KG +PD +T+ + G G +
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 571 LFDSMKSVHGVQPDQRHFSCMVDLLC 596
L M+ ++P ++ ++D LC
Sbjct: 243 LLKKMEQ-GKIEPGVVIYNTIIDALC 267
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 225/500 (45%), Gaps = 32/500 (6%)
Query: 107 DTVTYNLLISAW--CFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVH 164
D VTYN L+ + P++A+ + EM L G + T++S+++ AR G E +++
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 165 CRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP----ERNLAVWNVLLRGFCEL 220
++ + G +VF TL+ + G E A +F+E+ + N+ +N ++ +
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFV-ESNIF 279
G E + + + G+ P+ VT+ LL V + +E + + + GFV E F
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 280 VANALVDFYSACGCLVGA----KKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVM 335
N L+ YS CG A ++ +A ++ ++N++++ A + + ++ M
Sbjct: 493 --NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMY----G 391
+ P+ + LL++ + +EIGL H+L G + ++ L+
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGL-----MHSLAEEVYSGVIEPRAVLLKTLVLVCS 605
Query: 392 KCSDIESSVAVFESLTKRTLEC-CNSLMTSLSHCGATQDVVELFGL---MIDEGLMPDEV 447
KC + + F L +R +L + +S G Q V + G+ M + G P
Sbjct: 606 KCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMA 665
Query: 448 TFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFE 507
T+++ + S SA F S+ + L G++ D +++ AY R + + +IF
Sbjct: 666 TYNSLM--YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 508 TLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG 563
+ + P+ I + + I YA + M ++ + V+ M++ G +P++ T+ + G
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLN 783
Query: 564 MVKEGRILFDSMKSVHGVQP 583
E ++ + ++++ P
Sbjct: 784 RKDEAKLFVEDLRNLDPHAP 803
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 117/550 (21%), Positives = 218/550 (39%), Gaps = 75/550 (13%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMP----LRDTVTYNLLISAWC---FPPEQALHLY 129
VY+ I AF S A+ VF M +TYN++++ + P + L
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 130 GEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNV 189
+M GI + T+++++ C R H+E QV + GF + L+ Y
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 190 GLREVARELFDELP----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTF 245
+ A ++ +E+ ++ +N L+ + G ++E++ ++M G +P+ T+
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 246 CYLLKVCSNHRRLNEGKKLQSCILKM--GFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
LL S R + + S +M + NI NA + Y G K F+
Sbjct: 388 TTLL---SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 304 IPV----ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
I V ++++WN+L++V N + + +F M+ G P +
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF------------ 492
Query: 360 IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESL----TKRTLECCN 415
+ LI Y +C E ++ V+ + L N
Sbjct: 493 ------------------------NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 416 SLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFA- 474
+++ +L+ G + ++ M D P+E+T+ + L A A L+H A
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY-----ANGKEIGLMHSLAE 583
Query: 475 -LKSGV-EGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNG 528
+ SGV E A + +L+ S+C + + + F L SP+ SM++ Y R
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 529 MGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG-MVKEGRILFDSMKSVHGVQPDQRH 587
M + VL M E+G P T+ + + + K IL + + G++PD
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL--AKGIKPDIIS 701
Query: 588 FSCMVDLLCR 597
++ ++ CR
Sbjct: 702 YNTVIYAYCR 711
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/513 (21%), Positives = 215/513 (41%), Gaps = 36/513 (7%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALA-VFHTMPLRDTVTYNLLISAWCFPPEQALHLY 129
R P ++NR KSRD N +H + + LI F Q +
Sbjct: 62 RQPISSQTSRNRNRTRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEP-NFDSGQLDSVL 120
Query: 130 GEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKF--------GFLSNVFVGGT 181
E+ + +T S +LA GFH++ + R + L N V
Sbjct: 121 SELFEPFKDKPESTSSELLAFLKGLGFHKK-FDLALRAFDWFMKQKDYQSMLDNSVVA-I 178
Query: 182 LVGFYLNVGLREVARELFDELPERNLAV----WNVLLRGFCELGCVEESLNYYSRMCFDG 237
++ G A +F+ L E ++ + L+ F G E++N + +M DG
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 238 VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGF--VESNIFVANALVDFYSACGCLV 295
+P +T+ +L V + K+ S + KM + + + N L+
Sbjct: 239 CKPTLITYNVILNVFG--KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 296 GAKKSFEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLL 351
A + FE + + +++N+L+ V + +A+++ M L G SPS+ + L+
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 352 NSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLT---- 407
++ +R + ++ + G + V + L+ + + +ES++++FE +
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKG-TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 408 KRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSS 467
K + N+ + + G +++++F + GL PD VT++T L + + S
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 468 QLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL----SSPNAICFTSMING 523
++G + +L+ AYSRCG E ++ ++ + +P+ + +++
Sbjct: 476 VFKEM--KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 524 YARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL 556
AR GM +Q VL M + KP+E+T+ C+L
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTY-CSL 565
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 22/234 (9%)
Query: 380 VHAQSALIDMYGKCSDIESSVAVFESLT----KRTLECCNSLMTSLSHCGAT-QDVVELF 434
V++ ++LI + +V VF+ + K TL N ++ G + L
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 435 GLMIDEGLMPDEVTFSTTLK-----ALSVSASATFTSSQLLHCFALKSGVEGDAAVACSL 489
M +G+ PD T++T + +L A+ F + +G D +L
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK-------AAGFSYDKVTYNAL 320
Query: 490 MDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGL 545
+D Y + + ++++ + SP+ + + S+I+ YAR+GM + + + + M EKG
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 546 KPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
KPD T+ L+G G V+ +F+ M++ G +P+ F+ + + G
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRG 433
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 221/500 (44%), Gaps = 65/500 (13%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTM------PLRDTVTYNLLISAWCFPPE--QALHL 128
+Y+ N I+ F + L ALAV M P D VT + L++ +C +A+ L
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEP--DIVTLSSLLNGYCHGKRISEAVAL 172
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+M ++ + + TF++++ E V + R+V G ++F GT+V
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 189 VGLREVARELFDELP----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
G ++A L ++ E ++ ++ ++ C V ++LN ++ M G+ PN VT
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
+ L++ N+ R ++ +L S +++ + N+ +AL+D + G LV A+K ++ +
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 305 PVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
++ +++SL++ +D L +A +F +M P+V +
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT-------------- 397
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTL----ECCNS 416
+ LI + K +E + +F +++R L N+
Sbjct: 398 ----------------------YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
L+ L G ++F M+ +G+ PD +T+S L L + ++ + K
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL--CKYGKLEKALVVFEYLQK 493
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQ 532
S +E D +++ + G VE +F +LS PN I +T+MI+G+ R G+ ++
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 533 GLAVLHAMVEKGLKPDEITF 552
A+ M E G P+ T+
Sbjct: 554 ADALFREMKEDGTLPNSGTY 573
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/508 (21%), Positives = 213/508 (41%), Gaps = 52/508 (10%)
Query: 107 DTVTYNLLISAWCFPPEQ--ALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVH 164
D +YN+LI+ +C + AL + G+M LG T SS+L E V +
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 165 CRVVKFGFLSNVFVGGTLV-GFYLNVGLREVARELFDELPER----NLAVWNVLLRGFCE 219
++ + N TL+ G +L+ E A L D + R +L + ++ G C+
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASE-AVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
G ++ +L+ +M +E + V + ++ N++ +N+ L F E +
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNL--------FTEMD-- 282
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
K NV+++NSL+ + DA L + M
Sbjct: 283 ------------------NKGIRP----NVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
+P+V + L+++ + ++ ++++ +K D + S+LI+ + ++ +
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP-DIFTYSSLINGFCMHDRLDEA 379
Query: 400 VAVFESLTKR----TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKA 455
+FE + + + N+L+ ++ +ELF M GL+ + VT++T ++
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 456 LSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS---- 511
L + +Q + + GV D L+D + G +E +L +FE L
Sbjct: 440 LFQAGDCDM--AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 512 PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRIL 571
P+ + MI G + G + G + ++ KG+KP+ I + ++G G+ +E L
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 572 FDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
F MK G P+ ++ ++ R G
Sbjct: 558 FREMKE-DGTLPNSGTYNTLIRARLRDG 584
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 38/206 (18%)
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVS------------------ASATFTSSQL 469
D V+LFG M+ +P V F+ L A++ + ++ + L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 470 LHCF---------------ALKSGVEGDAAVACSLMDAY---SRCGH-VELSLQIFETLS 510
++CF +K G E D SL++ Y R V L Q+F
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 511 SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRI 570
PN + F ++I+G + + +A++ MV +G +PD T+ + G G +
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 571 LFDSMKSVHGVQPDQRHFSCMVDLLC 596
L M+ ++ D ++ ++D LC
Sbjct: 242 LLKKMEK-GKIEADVVIYTTIIDALC 266
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 227/496 (45%), Gaps = 57/496 (11%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTM------PLRDTVTYNLLISAWCFPPE--QALHL 128
+YT N I+ + L+ ALA+ M P VT N L++ +C +A+ L
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP--SIVTLNSLLNGFCHGNRISEAVAL 157
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+M +G + + TF++++ + E V + R+V G ++ G ++
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 189 VGLREVARELFDELP----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
G ++A L +++ E ++ +++ ++ C+ V+++LN ++ M G+ P+ T
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
+ L+ N+ R ++ +L S +L+ + N+ N+L+D ++ G L+ A+K F+ +
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 305 PVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
N++++NSL++ +D L +A ++FT+M P V + L+N +A+++
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
G ++ + G G+ + LI + + SD +++ VF+
Sbjct: 397 VDGMELFRDMSRRGL-VGNTVTYTTLIHGFFQASDCDNAQMVFKQ--------------- 440
Query: 421 LSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
M+ +G+ P+ +T++T L L + + ++ + KS +E
Sbjct: 441 ----------------MVSDGVHPNIMTYNTLLDGLC--KNGKLEKAMVVFEYLQKSKME 482
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAV 536
D + + + G VE +F +LS P+ I + +MI+G+ + G+ ++ +
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 537 LHAMVEKGLKPDEITF 552
M E G PD T+
Sbjct: 543 FIKMKEDGPLPDSGTY 558
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 179/406 (44%), Gaps = 17/406 (4%)
Query: 206 NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQ 265
++ N LL GFC + E++ +M G +P+ VTF L+ H + +E L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 266 SCILKMGFVESNIFVANALVDFYSACG---CLVGAKKSFEAIPVE-NVISWNSLVSVNAD 321
++ G + ++ A+++ G + E +E +V+ +++++
Sbjct: 194 ERMVVKG-CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
+ DAL LFT M G P V + L++ ++ L+ + V
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVELFGLM 437
S LID + K + + +F+ + +R+++ NSL+ + ++F LM
Sbjct: 313 FNS-LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 438 IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCG 497
+ + +PD VT++T + A +L + + G+ G+ +L+ + +
Sbjct: 372 VSKDCLPDVVTYNTLINGF-CKAKKVVDGMELFRDMS-RRGLVGNTVTYTTLIHGFFQAS 429
Query: 498 HVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFL 553
+ + +F+ + S PN + + ++++G +NG ++ + V + + ++PD T+
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 554 CALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
G G V++G LF S+ S+ GV+PD ++ M+ C+ G
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIAYNTMISGFCKKG 534
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 13/179 (7%)
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS---GVEGDAA 484
+ V+LFG M+ P V FS L SA A L+ F K GV +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLL-----SAIAKMKKFDLVISFGEKMEILGVSHNLY 101
Query: 485 VACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAM 540
+++ R + +L I + P+ + S++NG+ + +A++ M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 541 VEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
VE G +PD +TF + G E L + M V G QPD + +++ LC+ G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM-VVKGCQPDLVTYGAVINGLCKRG 219
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 125/310 (40%), Gaps = 44/310 (14%)
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
N+ ++N +++ L AL + M G PS+ +L LLN I +
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 368 CHALKLGFDEGSV-----------HAQS----ALID---MYGKCSDIESSVAVFESLTKR 409
+++G+ +V H ++ AL++ + G D+ + AV L KR
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 410 -----TLECCN---------------SLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTF 449
L N +++ SL D + LF M ++G+ PD T+
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 450 STTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL 509
S+ + L ++ + L L+ + + SL+DA+++ G + + ++F+ +
Sbjct: 279 SSLISCLC--NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 510 S----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMV 565
PN + + S+ING+ + + + MV K PD +T+ + G V
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 566 KEGRILFDSM 575
+G LF M
Sbjct: 397 VDGMELFRDM 406
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 223/495 (45%), Gaps = 32/495 (6%)
Query: 89 KSRDLNSALAVFHTM----PLRDTVTYNLLISAWCFPP---EQALHLYGEMGLLGIRETS 141
K+ DL SAL +F M P ++VT+++LI W E+AL Y +M +LG+ +
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE-WFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
+++ + H E +++ + G L+NVFV T++ + G + A EL +
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 202 LPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC-SNHR 256
+ R N+ +N ++ G C ++ + +S + G++PN T+ L+ C NH
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 257 RLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-----NVIS 311
N + + + +E N V +++ G A++ + E + +S
Sbjct: 529 EQNALEVVNH--MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
+NS++ + A+ + M G SP+V + L+N + + ++
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGAT 427
G + + A ALID + K S++ES+ A+F L + L NSL++ + G
Sbjct: 647 NKGV-KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVAC 487
++L+ M+ +GL D T++T + L + S L+ G+ D +
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE--LYTEMQAVGLVPDEIIYT 763
Query: 488 SLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEK 543
+++ S+ G +++FE + +PN + + ++I G+ R G + + M++K
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
Query: 544 GLKPDEITFLCALTG 558
G+ PD TF ++G
Sbjct: 824 GILPDGATFDILVSG 838
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/513 (19%), Positives = 217/513 (42%), Gaps = 26/513 (5%)
Query: 107 DTVTYNLLISAWCFPPEQAL--HLYGEMGLLGI-RETSTTFSSVLAVCARSGFHREGVQV 163
D++ Y+L + A C + A+ L EM + + T++SV+ + G + +++
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326
Query: 164 HCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL----PERNLAVWNVLLRGFCE 219
++ G NV +L+ + A LFD++ P N ++VL+ F +
Sbjct: 327 KDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRK 386
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
G +E++L +Y +M G+ P+ +++ ++ E KL + G +N+F
Sbjct: 387 NGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL--ANVF 444
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVM 335
V N ++ + G A + + NV+S+N+++ + + A +F+ +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD 395
G P+ + L++ C R + ++ H + V Q+ +I+ K
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQT-IINGLCKVGQ 563
Query: 396 IESSVAVFESLTKRTLECC-----NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFS 450
+ + ++ + C NS++ G V + M G+ P+ +T++
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 451 TTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS 510
+ + L + + + GV+ D +L+D + + ++E + +F L
Sbjct: 624 SLMNGLC--KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681
Query: 511 ----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVK 566
+P+ + S+I+G+ G L + M++ GL+ D T+ + G G +
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 567 EGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
L+ M++V G+ PD+ ++ +V+ L + G
Sbjct: 742 LASELYTEMQAV-GLVPDEIIYTVIVNGLSKKG 773
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 104/544 (19%), Positives = 219/544 (40%), Gaps = 71/544 (13%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTY----NLLISAWCFPPE--QALHLYGEMGL 134
N ++A+ K R + A+ + + M D + + N +SA +A LY M
Sbjct: 167 NYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVA 226
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
+G+ + T ++ R E ++V R ++ G + + ++ ++
Sbjct: 227 IGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLL--------YSLAVQAC 278
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
+ L +LA+ N LLR E ++C P+ T+ ++
Sbjct: 279 CKTL-------DLAMANSLLREMKE-----------KKLCV----PSQETYTSVILASVK 316
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI----PVENVI 310
+++ +L+ +L G + N+ A +L+ + LV A F+ + P N +
Sbjct: 317 QGNMDDAIRLKDEMLSDG-ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSV 375
Query: 311 SWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHA 370
+++ L+ N + ALE + M++ G +PSV + ++ L Q H A
Sbjct: 376 TFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW-------LKGQKHEEA 428
Query: 371 LKLGFDE------GSVHAQSALIDMYGKCSDIESSVAVFESLTKR----TLECCNSLMTS 420
LKL FDE +V + ++ K + + + + R + N++M
Sbjct: 429 LKL-FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM-- 485
Query: 421 LSHC-GATQDVVEL-FGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSG 478
L HC D+ + F ++++GL P+ T+S + + + H + S
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS--SN 543
Query: 479 VEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAIC-----FTSMINGYARNGMGKQG 533
+E + V ++++ + G + ++ + +C + S+I+G+ + G
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 534 LAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVD 593
+A M G+ P+ IT+ + G + + + D MK+ GV+ D + ++D
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN-KGVKLDIPAYGALID 662
Query: 594 LLCR 597
C+
Sbjct: 663 GFCK 666
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/543 (21%), Positives = 235/543 (43%), Gaps = 85/543 (15%)
Query: 104 PLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGV 161
P + VT+ LI+ +C E +A L+ M GI +S+++ ++G G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 162 QVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL----PERNLAVWNVLLRGF 217
++ + + G +V V + + Y+ G A ++ + N+ + +L++G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 218 CELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESN 277
C+ G + E+ Y ++ G+EP+ VT+ L+ L G L ++KMG+ +
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY-PPD 460
Query: 278 IFVANALVDFYSACGCLVGA-----KKSFEAIPVENVISWNSLVSVNADNDLLCDALELF 332
+ + LVD S G ++ A K ++I + NV+ +NSL+ + +AL++F
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL-NVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 333 TVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGK 392
+M ++G P V + ++ + + + C +K ++ Q L D+ +
Sbjct: 520 RLMGIYGIKPDVATFTTVM-------RVSIMEDAFCKHMK-----PTIGLQ--LFDLMQR 565
Query: 393 CSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTT 452
+ I + +AV CN ++ L C +D + F +I+ + PD VT++T
Sbjct: 566 -NKISADIAV-----------CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 613
Query: 453 L----------------KALSVS--ASATFTSSQLLHCFALKSGVEG------------- 481
+ + L V+ T T + L+H + ++G
Sbjct: 614 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 673
Query: 482 --DAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLA 535
+A LMD +S+ +E S ++FE + SP+ + ++ +I+G + G +
Sbjct: 674 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 733
Query: 536 VLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLL 595
+ H ++ L PD + + + G G + E +L++ M +GV+PD DLL
Sbjct: 734 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR-NGVKPD--------DLL 784
Query: 596 CRA 598
RA
Sbjct: 785 QRA 787
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 40/349 (11%)
Query: 228 NYYSRMCFDGVEPNGVT---------FCY--LLKVCSNHRRLNEGK---KLQSC--ILKM 271
+++ ++C G+EP+GV+ FC + K HR + E + SC +LK
Sbjct: 202 DHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLK- 260
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALEL 331
G I VA+ L+ CG P NV+++ +L++ + A +L
Sbjct: 261 GLSVDQIEVASRLLSLVLDCG------------PAPNVVTFCTLINGFCKRGEMDRAFDL 308
Query: 332 FTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYG 391
F VM+ G P + + L++ +A +G+G ++ AL G + V S+ ID+Y
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV-KLDVVVFSSTIDVYV 367
Query: 392 KCSDIESSVAVFESL----TKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEV 447
K D+ ++ V++ + + L+ L G + ++G ++ G+ P V
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427
Query: 448 TFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCG----HVELSL 503
T+S+ + S L+ +K G D + L+D S+ G + S+
Sbjct: 428 TYSSLIDGF--CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 504 QIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
++ N + F S+I+G+ R + L V M G+KPD TF
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 222/502 (44%), Gaps = 71/502 (14%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTM------PLRDTVTYNLLISAWCFPPE--QALHL 128
+YT N I+ F + ++ ALA+ M P VT + L++ +C A+ L
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVAL 177
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+M +G R + TF++++ E V + R+V+ G N+ G +V
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 189 VGLREVARELFDELP----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
G ++A L +++ E N+ +++ ++ C+ +++LN ++ M GV PN +T
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 297
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
+ L+ N+ R ++ +L S +++ + N+ NAL+D + G LV A+K ++ +
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 305 PVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
++ +++SL++ +D L +A +F +M P+V + L+N +A+ I
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
DEG V +F +++R L T+
Sbjct: 417 ---------------DEG---------------------VELFREMSQRGLVGNTVTYTT 440
Query: 421 LSH-------CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCF 473
L H C Q V F M+ +G+ P+ +T++T L L + + ++ +
Sbjct: 441 LIHGFFQARDCDNAQMV---FKQMVSDGVHPNIMTYNTLLDGLC--KNGKLEKAMVVFEY 495
Query: 474 ALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGM 529
+S +E +++ + G VE +F +LS P+ I + +MI+G+ R G+
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 530 GKQGLAVLHAMVEKGLKPDEIT 551
++ A+ M E G PD T
Sbjct: 556 KEEADALFRKMREDGPLPDSGT 577
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 227/531 (42%), Gaps = 56/531 (10%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPL----RDTVTYNLLISAWCFPPE--QAL 126
P ++ N+ + A K + + +++ M + TYN+LI+ +C + AL
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 127 HLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV-GF 185
L G+M LG + T SS+L + V + ++V+ G+ + TL+ G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 186 YLNVGLREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPN 241
+L+ E A L D + +R NL + V++ G C+ G ++ + N ++M +E N
Sbjct: 201 FLHNKASE-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
V + ++ +R ++ L F E + N V
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNL--------FTE----MENKGVR--------------- 292
Query: 302 EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
NVI+++SL+S + + DA L + M +P+V + L+++ + ++
Sbjct: 293 -----PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR----TLECCNSL 417
++++ +K D + S+LI+ + ++ + +FE + + + N+L
Sbjct: 348 EAEKLYDEMIKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 418 MTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS 477
+ + VELF M GL+ + VT++T + + ++Q++ +
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD--NAQMVFKQMVSD 464
Query: 478 GVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQG 533
GV + +L+D + G +E ++ +FE L P + MI G + G + G
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 534 LAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPD 584
+ ++ KG+KPD I + ++G G+ +E LF M+ G PD
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE-DGPLPD 574
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 188/446 (42%), Gaps = 62/446 (13%)
Query: 206 NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQ 265
NL +N+L+ FC + +L +M G EP+ VT LL + +R+++ L
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 266 SCILKMGFVESNI---------FVAN------ALVDFYSACGC----------------- 293
+++MG+ I F+ N ALVD GC
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 294 -----LVGAKKSFEAIPVE-NVISWNSLVSVNADNDLLC------DALELFTVMQLWGQS 341
EA +E NV+ +++++ D LC DAL LFT M+ G
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVI------DSLCKYRHEDDALNLFTEMENKGVR 292
Query: 342 PSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVA 401
P+V + L++ E ++ ++ + V +ALID + K + +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV-TFNALIDAFVKEGKLVEAEK 351
Query: 402 VFESLTKRTLE----CCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALS 457
+++ + KR+++ +SL+ + +F LMI + P+ VT++T +
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF- 410
Query: 458 VSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PN 513
A +L + + G+ G+ +L+ + + + + +F+ + S PN
Sbjct: 411 CKAKRIDEGVELFREMS-QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 514 AICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFD 573
+ + ++++G +NG ++ + V + ++P T+ + G G V++G LF
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 574 SMKSVHGVQPDQRHFSCMVDLLCRAG 599
S+ S+ GV+PD ++ M+ CR G
Sbjct: 530 SL-SLKGVKPDVIIYNTMISGFCRKG 554
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 7/181 (3%)
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGD 482
H D + LFG M+ +P F+ L A++ S L + G+ +
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVIS--LGEKMQRLGISHN 119
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLH 538
L++ + R + L+L + + P+ + +S++NGY +A++
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 539 AMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRA 598
MVE G +PD ITF + G E L D M G QP+ + +V+ LC+
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKR 238
Query: 599 G 599
G
Sbjct: 239 G 239
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 120/540 (22%), Positives = 224/540 (41%), Gaps = 78/540 (14%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMP----LRDTVTYNLLISAW--CFPPEQ 124
R ++T + AF +++SAL++ M + ++V Y LI + C +
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 125 ALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVG 184
AL L EM L+G + TF+ V+ + E ++ R++ GF + G L+
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 185 FYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFD-GVEPNGV 243
+G + A++LF +P+ + ++N L+ GF G ++++ S M G+ P+
Sbjct: 331 GLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 244 TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
T+ L+ + ++ + G + N++ LVD + G + A
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKG-CKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 304 IPVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
+ + N + +N L+S + +A+E+F M G P V + L++ +E
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 360 IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMT 419
I HAL L D+ S V ++T N+L+
Sbjct: 510 IK-------HALWL-------------------LRDMISEGVVANTVTY------NTLIN 537
Query: 420 SLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGV 479
+ G ++ +L M+ +G DE+T+++ +K L C A
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL---------------CRA----- 577
Query: 480 EGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHA 539
G+ A SL + R GH +P+ I +ING R+GM ++ +
Sbjct: 578 -GEVDKARSLFEKMLRDGH------------APSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 540 MVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
MV +G PD +TF + G G +++G +F +++ G+ PD F+ ++ LC+ G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQA-EGIPPDTVTFNTLMSWLCKGG 683
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/497 (21%), Positives = 207/497 (41%), Gaps = 29/497 (5%)
Query: 122 PEQALHLYGEM-GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGG 180
P Q L EM + T +++ VL + H+ V ++ +F G
Sbjct: 162 PGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFG 221
Query: 181 TLVGFYLNVGLREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFD 236
++ + V + A L ++ + N ++ L+ + V E+L M
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 281
Query: 237 GVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVG 296
G P+ TF ++ R+NE K+ + +L GF +I L++ G +
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDI-TYGYLMNGLCKIGRVDA 340
Query: 297 AKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQL-WGQSPSVRSLVGLLNSCS 355
AK F IP ++ +N+L+ + L DA + + M +G P V + L+
Sbjct: 341 AKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 356 RAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLEC-- 413
+ +GL ++ H ++ + +V++ + L+D + K I+ + V ++ L+
Sbjct: 401 KEGLVGLALEV-LHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 414 --CNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLH 471
N L+++ + VE+F M +G PD TF++ + L ++ H
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC-------EVDEIKH 512
Query: 472 CFAL-----KSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL---SSP-NAICFTSMIN 522
L GV + +L++A+ R G ++ + ++ + SP + I + S+I
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 523 GYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQ 582
G R G + ++ M+ G P I+ + G +GMV+E + F + G
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA-VEFQKEMVLRGST 631
Query: 583 PDQRHFSCMVDLLCRAG 599
PD F+ +++ LCRAG
Sbjct: 632 PDIVTFNSLINGLCRAG 648
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/500 (21%), Positives = 216/500 (43%), Gaps = 65/500 (13%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTM------PLRDTVTYNLLISAWCFPPE--QALHL 128
+YT N I+ F + ++ ALA+ M P VT + L++ +C A+ L
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVAL 177
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+M +G R + TF++++ E V + R+V+ G N+ G +V
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 189 VGLREVARELFDELP----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
G ++A L +++ E ++ ++N ++ C+ V+++LN + M G+ PN VT
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
+ L+ ++ R ++ +L S +++ + N+ NAL+D + G V A+K ++ +
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 305 PVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
++ ++NSLV+ +D L A ++F M P V +
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT-------------- 402
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTL----ECCNS 416
+ LI + K +E +F ++ R L +
Sbjct: 403 ----------------------YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
L+ L H G + ++F M+ +G+ PD +T+S L L + + + + K
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL--CNNGKLEKALEVFDYMQK 498
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQ 532
S ++ D + ++++ + G V+ +F +LS PN + + +MI+G + ++
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 533 GLAVLHAMVEKGLKPDEITF 552
A+L M E G P+ T+
Sbjct: 559 AYALLKKMKEDGPLPNSGTY 578
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/547 (20%), Positives = 232/547 (42%), Gaps = 58/547 (10%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTV----TYNLLISAWCFPPE--QAL 126
P + N+ + A K + + +++ M + V TYN+LI+ +C + AL
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 127 HLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV-GF 185
L G+M LG + T SS+L + V + ++V+ G+ + TL+ G
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 186 YLNVGLREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPN 241
+L+ E A L D + +R NL + V++ G C+ G + +LN ++M +E +
Sbjct: 201 FLHNKASE-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
V F ++ +R +++ N+F K
Sbjct: 260 VVIFNTIIDSLCKYRHVDDA--------------LNLF-------------------KEM 286
Query: 302 EAIPVE-NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
E + NV++++SL+S DA +L + M +P++ + L+++ + +
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRT----LECCNS 416
++++ +K D + ++L++ + ++ + +FE + + + N+
Sbjct: 347 VEAEKLYDDMIKRSIDP-DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
L+ +D ELF M GL+ D VT++T ++ L ++Q + +
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD--NAQKVFKQMVS 463
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP----NAICFTSMINGYARNGMGKQ 532
GV D L+D G +E +L++F+ + + +T+MI G + G
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 533 GLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMV 592
G + ++ KG+KP+ +T+ ++G +++E L MK G P+ ++ ++
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE-DGPLPNSGTYNTLI 582
Query: 593 DLLCRAG 599
R G
Sbjct: 583 RAHLRDG 589
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 35/195 (17%)
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSAS------------------ATF 464
H D + LFG M+ +P V F+ L A++ +
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121
Query: 465 TSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGY 524
T + L++CF +S + ++A +L+ + G+ P+ + +S++NGY
Sbjct: 122 TYNILINCFCRRSQI----SLALALLGKMMKLGY------------EPSIVTLSSLLNGY 165
Query: 525 ARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPD 584
+A++ MVE G +PD ITF + G E L D M G QP+
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPN 224
Query: 585 QRHFSCMVDLLCRAG 599
+ +V+ LC+ G
Sbjct: 225 LVTYGVVVNGLCKRG 239
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/503 (21%), Positives = 222/503 (44%), Gaps = 71/503 (14%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTM------PLRDTVTYNLLISAWCFPPE--QALHL 128
+YT + I+ F + L+ ALAV M P D VT + L++ +C A+ L
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLSSLLNGYCHSKRISDAVAL 175
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+M +G + + TF++++ E V + ++V+ G ++ GT+V
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 189 VGLREVARELFDELP----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
G ++A L ++ E ++ ++N ++ G C+ ++++LN ++ M G+ P+ T
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
+ L+ N+ R ++ +L S +++ + N+ +AL+D + G LV A+K ++ +
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 305 PVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
++ +++SL++ +D L +A +F +M P+V +
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY------------- 401
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTS 420
S LI + K +E + +F +++R L T+
Sbjct: 402 -----------------------STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 421 LSH-------CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCF 473
L H C Q V F M+ G+ P+ +T++ L L + + ++ +
Sbjct: 439 LIHGFFQARDCDNAQMV---FKQMVSVGVHPNILTYNILLDGL--CKNGKLAKAMVVFEY 493
Query: 474 ALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGM 529
+S +E D +++ + G VE ++F LS SPN I + +MI+G+ R G
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 530 GKQGLAVLHAMVEKGLKPDEITF 552
++ ++L M E G P+ T+
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTY 576
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 178/408 (43%), Gaps = 17/408 (4%)
Query: 204 ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKK 263
E ++ + LL G+C + +++ +M G +P+ TF L+ H + +E
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 264 LQSCILKMGFVESNIFVANALVDFYSACGCL---VGAKKSFEAIPVE-NVISWNSLVSVN 319
L +++ G + ++ +V+ G + + K E +E +V+ +N+++
Sbjct: 210 LVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 320 ADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGS 379
+ DAL LFT M G P V + L++ ++ ++ +
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 380 VHAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVELFG 435
V SALID + K + + +++ + KR+++ +SL+ + +F
Sbjct: 329 V-TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 436 LMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSR 495
LMI + P+ VT+ST +K A +L + + G+ G+ +L+ + +
Sbjct: 388 LMISKDCFPNVVTYSTLIKGF-CKAKRVEEGMELFREMS-QRGLVGNTVTYTTLIHGFFQ 445
Query: 496 CGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEIT 551
+ + +F+ + S PN + + +++G +NG + + V + ++PD T
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 552 FLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+ + G G V++G LF ++ S+ GV P+ ++ M+ CR G
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYNTMISGFCRKG 552
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 153/372 (41%), Gaps = 27/372 (7%)
Query: 276 SNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVM 335
S+I + VD + G +V ++ P +++ +N L+S A + + L M
Sbjct: 59 SDIIKVDDAVDLF---GDMVKSR------PFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD 395
Q G S + + +N R ++ L + +KLG+ E + S+L++ Y
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY-EPDIVTLSSLLNGYCHSKR 168
Query: 396 IESSVAVFESLTKRTLECCNSLMTSLSHC----GATQDVVELFGLMIDEGLMPDEVTFST 451
I +VA+ + + + + T+L H + V L M+ G PD VT+ T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 452 TLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS 511
+ L S L K +E D + +++D + H++ +L +F + +
Sbjct: 229 VVNGLCKRGDIDLALSLLKK--MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 512 ----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKE 567
P+ ++S+I+ G +L M+E+ + P+ +TF + G + E
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 568 GRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCF----MWSSL 623
L+D M + PD +S +++ C K DCF +S+L
Sbjct: 347 AEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYSTL 404
Query: 624 LRS-CRSHKNEE 634
++ C++ + EE
Sbjct: 405 IKGFCKAKRVEE 416
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 13/190 (6%)
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
L LS D V+LFG M+ P V F+ L SA A +L+ +
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLL-----SAVAKMNKFELVISLGEQ 108
Query: 477 S---GVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGM 529
G+ D ++ + R + L+L + + P+ + +S++NGY +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 530 GKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFS 589
+A++ MVE G KPD TF + G E L D M G QPD +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVTYG 227
Query: 590 CMVDLLCRAG 599
+V+ LC+ G
Sbjct: 228 TVVNGLCKRG 237
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/509 (21%), Positives = 221/509 (43%), Gaps = 73/509 (14%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTM------PLRDTVTYNLLISAWCFPPE--QALHLY 129
YT + I+ F + L ALAV M P + VT + L++ +C +A+ L
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEP--NIVTLSSLLNGYCHSKRISEAVALV 174
Query: 130 GEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNV 189
+M + G + + TF++++ E + + R+V G ++ G +V
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 190 GLREVARELFDELPERNLA----VWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTF 245
G ++A L +++ + L ++N ++ G C+ ++++LN + M G+ PN VT+
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 246 CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
L+ N+ R ++ +L S +++ + ++F +AL+D + G LV A+K ++ +
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 306 VE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
++++++SL++ +D L +A ++F M
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV------------------------- 388
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTL----ECCNSL 417
HC V + LI + K +E + VF +++R L N L
Sbjct: 389 ---SKHCFP--------DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 418 MTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS 477
+ L G E+F M+ +G+ P+ +T++T L L + + ++ + +S
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL--CKNGKLEKAMVVFEYLQRS 495
Query: 478 GVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQG 533
+E +++ + G VE +F LS P+ + + +MI+G+ R G ++
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 534 LAVLHAMVEKGLKPDEITFLCALTGCNHT 562
A+ M E G P+ +GC +T
Sbjct: 556 DALFKEMKEDGTLPN--------SGCYNT 576
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 106/529 (20%), Positives = 224/529 (42%), Gaps = 27/529 (5%)
Query: 93 LNSALAVFHTM----PLRDTVTYNLLISAWCF--PPEQALHLYGEMGLLGIRETSTTFSS 146
L+ A+A+F M P + ++ L+SA + + L +M LGI T+S
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 147 VLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL---- 202
++ R + V +++K G+ N+ +L+ Y + A L D++
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 203 PERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGK 262
+ N +N L+ G E++ RM G +P+ VT+ ++ +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 263 KLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE----NVISWNSLVSV 318
L + ++ G +E + + N ++D + A F+ + + NV++++SL+S
Sbjct: 242 NLLNK-MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 319 NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG 378
+ DA L + M +P V + L+++ + ++ ++++ +K D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP- 359
Query: 379 SVHAQSALIDMYGKCSDIESSVAVFESLTKR----TLECCNSLMTSLSHCGATQDVVELF 434
S+ S+LI+ + ++ + +FE + + + N+L+ ++ +E+F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYS 494
M GL+ + VT++ ++ L + +Q + + GV + +L+D
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDM--AQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 495 RCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEI 550
+ G +E ++ +FE L P + MI G + G + G + + KG+KPD +
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV 537
Query: 551 TFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+ ++G G +E LF MK G P+ ++ ++ R G
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNTLIRARLRDG 585
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/547 (20%), Positives = 233/547 (42%), Gaps = 58/547 (10%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPL----RDTVTYNLLISAWCFPPE--QAL 126
P ++ N+ + A K + + +++ M + TYN+LI+ +C + AL
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 127 HLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV-GF 185
L G+M LG + T SS+L + V + ++V+ G+ + TL+ G
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 186 YLNVGLREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPN 241
+L+ E A L D + +R NL + V++ G C+ G ++ + N ++M +E +
Sbjct: 126 FLHNKASE-AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSF 301
V F ++ +R +++ N+F K
Sbjct: 185 VVIFNTIIDSLCKYRHVDDA--------------LNLF-------------------KEM 211
Query: 302 EAIPVE-NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
E + NV++++SL+S DA +L + M +P++ + L+++ + +
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRT----LECCNS 416
+++H +K D + ++LI+ + ++ + +FE + + L+ N+
Sbjct: 272 VEAEKLHDDMIKRSIDP-DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
L+ +D ELF M GL+ D VT++T ++ L ++Q + +
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD--NAQKVFKQMVS 388
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP----NAICFTSMINGYARNGMGKQ 532
GV D L+D G +E +L++F+ + + +T+MI G + G
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 533 GLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMV 592
G + ++ KG+KP+ +T+ ++G +++E L MK G PD ++ ++
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE-DGPLPDSGTYNTLI 507
Query: 593 DLLCRAG 599
R G
Sbjct: 508 RAHLRDG 514
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 128/552 (23%), Positives = 223/552 (40%), Gaps = 71/552 (12%)
Query: 108 TVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHC 165
TVTYN L+ + +AL + EM S T++ ++A R+GF +E V
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
Query: 166 RVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER----NLAVWNVLLRGFCELG 221
+ K G + N T++ Y G + A +LF + E N +N +L +
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKS 435
Query: 222 CVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH---RRLNEG-KKLQSCILKMGFVESN 277
E + M +G PN T+ +L +C N + +N ++++SC GF E +
Sbjct: 436 RSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC----GF-EPD 490
Query: 278 IFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQL 337
N L+ Y CG V DA +++ M
Sbjct: 491 RDTFNTLISAYGRCGSEV-------------------------------DASKMYGEMTR 519
Query: 338 WGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD-- 395
G + V + LLN+ +R + G+ + GF + + + S ++ Y K +
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF-KPTETSYSLMLQCYAKGGNYL 578
Query: 396 ----IESSVA---VFES-LTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEV 447
IE+ + +F S + RTL N C A F L G PD V
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLLANF------KCRALAGSERAFTLFKKHGYKPDMV 632
Query: 448 TFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFE 507
F++ L + + + ++ + + G+ D SLMD Y R G + +I +
Sbjct: 633 IFNSMLSIFT--RNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILK 690
Query: 508 TLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG 563
TL P+ + + ++I G+ R G+ ++ + +L M E+G++P T+ ++G G
Sbjct: 691 TLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
Query: 564 MVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSL 623
M E + + M + + +P++ F +VD CRAG + CF S+
Sbjct: 751 MFAEIEDVIECM-AKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSI 809
Query: 624 LR-SCRSHKNEE 634
R + R +N E
Sbjct: 810 QRLALRVRENLE 821
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 397 ESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKAL 456
+ V + S+ ++ L + S+ D+V L + D G + F L
Sbjct: 106 KKEVVLVNSIVEQPLTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHW-ERAVFLFEWLVL 164
Query: 457 SVSASATFTSSQLLHCFALKSGVEGDAAVACSLMD-------------------AYSRCG 497
S ++ A Q++ F G E +VA L+D AYSR G
Sbjct: 165 SSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTG 224
Query: 498 HVELSLQIFETLS----SPNAICFTSMINGYARNGMG-KQGLAVLHAMVEKGLKPDEITF 552
E ++ +FE + SP + + +++ + + G ++ L VL M KGLK DE T
Sbjct: 225 KYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTC 284
Query: 553 LCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
L+ C G+++E + F +KS G +P ++ ++ + +AG
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSC-GYEPGTVTYNALLQVFGKAG 330
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 18/230 (7%)
Query: 380 VHAQSALIDMYGKCSDIESSVAVFESLTKR----TLECCNSLMTSLSHCGAT-QDVVELF 434
V A + ++ Y + E ++ +FE + + TL N ++ G + + ++ +
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 269
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSA---SATFTSSQLLHCFALKSGVEGDAAVACSLMD 491
M +GL DE T ST L A + A ++L C G E +L+
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC-----GYEPGTVTYNALLQ 324
Query: 492 AYSRCGHVELSLQIFETL---SSP-NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKP 547
+ + G +L + + + S P +++ + ++ Y R G K+ V+ M +KG+ P
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
Query: 548 DEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR 597
+ IT+ + G E LF SMK G P+ ++ ++ LL +
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGK 433
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 145/319 (45%), Gaps = 10/319 (3%)
Query: 132 MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
M L + +S + AR R ++ ++K + L+ +++ G
Sbjct: 79 MDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGR 138
Query: 192 REVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE-----PNGVTFC 246
++ R++FD +P R+ W ++ G E+G E++ + M + P+ + C
Sbjct: 139 LDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGC 198
Query: 247 YLLKVCSNHRRLNEGKKLQSCILKMGFV-ESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
+LK C+ R GK++ + K+GF+ E + +++ +L+ FY CL A +
Sbjct: 199 -VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLS 257
Query: 306 VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL-GK 364
N ++W + V+ + + + F M G +V +L +CS + G G+
Sbjct: 258 NANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQ 317
Query: 365 QIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRT-LECCNSLMTSLSH 423
Q+H +A+KLGF E + LI+MYGK ++ + VF+S T + C N+++ S
Sbjct: 318 QVHANAIKLGF-ESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQ 376
Query: 424 CGATQDVVELFGLMIDEGL 442
G + ++L M G+
Sbjct: 377 NGIYIEAIKLLYQMKATGI 395
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 140/293 (47%), Gaps = 8/293 (2%)
Query: 263 KLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADN 322
+LQ I+K + F+ N L+ + +CG L ++ F+ +P + SW + +
Sbjct: 109 ELQVHIMKSSIRPTITFI-NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEM 167
Query: 323 DLLCDALELFTVMQLWGQSPSVRS---LVG-LLNSCSRAEEIGLGKQIHCHALKLGF-DE 377
DA LF M Q + + ++G +L +C+ + LGKQ+H KLGF DE
Sbjct: 168 GDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDE 227
Query: 378 GSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLM 437
+ +LI YG+ +E + V L+ + +T+ G Q+V+ F M
Sbjct: 228 EDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEM 287
Query: 438 IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCG 497
+ G+ + FS LKA S + S Q +H A+K G E D + C L++ Y + G
Sbjct: 288 GNHGIKKNVSVFSNVLKACSWVSDGG-RSGQQVHANAIKLGFESDCLIRCRLIEMYGKYG 346
Query: 498 HVELSLQIFETLSSPNAI-CFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDE 549
V+ + ++F++ ++ C+ +M+ Y +NG+ + + +L+ M G+K +
Sbjct: 347 KVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHD 399
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 91 RDLNSALAVFHTMPLRDTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVL 148
R L A V H + +TV + ++ E + + + EMG GI++ + FS+VL
Sbjct: 244 RCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVL 303
Query: 149 AVCA-RSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD-ELPERN 206
C+ S R G QVH +K GF S+ + L+ Y G + A ++F E +
Sbjct: 304 KACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETS 363
Query: 207 LAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPN 241
++ WN ++ + + G E++ +M G++ +
Sbjct: 364 VSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAH 398
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 205/492 (41%), Gaps = 56/492 (11%)
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL-VGF--YLNVGLREVARELFD 200
F L+ G +Q+ ++++ N+ TL +G Y + ARE+FD
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 201 ELPE----RNLAVWNVLLRGFCELGCVEESLNYYSRMCFD-GVEPNGVTFCYLLKVCSNH 255
++ + N+ +NVL+ G+C G +E++L RM + V P+ VT+ +LK S
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVI----S 311
RL++ K+L + K G V N N LV Y G L A + E + NV+ +
Sbjct: 254 GRLSDLKELLLDMKKNGLV-PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSC-------------SRAE 358
+N L++ + + + LEL M+ P V + L++ C + E
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 359 EIGLGKQIHCHALKLGF------DEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE 412
G+ H + L + E L+DM+G DI + +L K L+
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDI----VTYHTLIKAYLK 428
Query: 413 CCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHC 472
G +E+ M +G+ + +T +T L AL + L
Sbjct: 429 V-----------GDLSGALEMMREMGQKGIKMNTITLNTILDALC--KERKLDEAHNLLN 475
Query: 473 FALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNG 528
A K G D +L+ + R VE +L++++ + +P F S+I G +G
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 529 MGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILF-DSMKSVHGVQPDQRH 587
+ + + E GL PD+ TF + G G V++ + +S+K H +PD
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK--HSFKPDNYT 593
Query: 588 FSCMVDLLCRAG 599
+ +++ LC+ G
Sbjct: 594 CNILLNGLCKEG 605
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 204/466 (43%), Gaps = 31/466 (6%)
Query: 110 TYNLLISAWCFPP--EQALHLYGEM-GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCR 166
T+N+L++ +C E AL + M + + T++++L ++ G + ++
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLD 265
Query: 167 VVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERN----LAVWNVLLRGFCELGC 222
+ K G + N LV Y +G + A ++ + + + N L +N+L+ G C G
Sbjct: 266 MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGS 325
Query: 223 VEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVAN 282
+ E L M ++P+ VT+ L+ C E +KL + G V++N N
Sbjct: 326 MREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG-VKANQVTHN 384
Query: 283 ALVDFY-SACGCLVGAKKSFEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQL 337
+ + +K E + + +++++++L+ L ALE+ M
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 338 WGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIE 397
G + +L +L++ + ++ + A K GF V LI + + +E
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV-TYGTLIMGFFREEKVE 503
Query: 398 SSVAVFESLTK----RTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL 453
++ +++ + K T+ NSL+ L H G T+ +E F + + GL+PD+ TF++ +
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 454 ----KALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL 509
K V + F + + H F + D L++ + G E +L F TL
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSF------KPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Query: 510 ---SSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
+ + + +MI+ + ++ K+ +L M EKGL+PD T+
Sbjct: 618 IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 134/342 (39%), Gaps = 57/342 (16%)
Query: 365 QIHCHALKLGFDEGSVHAQSALIDM--YGKCSDIESSVAVFESLTK----RTLECCNSLM 418
QI ++L + + LI + Y I S+ VF+ + K ++ N L+
Sbjct: 152 QIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLV 211
Query: 419 TSLSHCGATQDVVELFGLMIDE-GLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS 477
G +D + + M+ E + PD VT++T LKA+S K
Sbjct: 212 NGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS------------------KK 253
Query: 478 GVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVL 537
G D EL L + + PN + + +++ GY + G K+ ++
Sbjct: 254 GRLSDLK---------------ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 538 HAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR 597
M + + PD T+ + G + G ++EG L D+MKS+ +QPD ++ ++D
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK-LQPDVVTYNTLIDGCFE 357
Query: 598 AGXXXXXXXXXXQTPDK----RDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDPDDPAV 653
G Q + SL C+ K E V TR + LV++ P +
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV-TRKVKELVDMHGFSPDI 416
Query: 654 --WLQASNFYAEIGNFDASREIREVALARKMTREIGHSSIEI 693
+ Y ++G+ + E M RE+G I++
Sbjct: 417 VTYHTLIKAYLKVGDLSGALE---------MMREMGQKGIKM 449
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/421 (18%), Positives = 166/421 (39%), Gaps = 27/421 (6%)
Query: 79 TKNREIDAFIKSRDLNSALAVFHTMP----LRDTVTYNLLISAWCFPP--EQALHLYGEM 132
T N + + K L A + M L D TYN+LI+ C + L L M
Sbjct: 277 TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM 336
Query: 133 GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLR 192
L ++ T+++++ C G E ++ ++ G +N + + R
Sbjct: 337 KSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR 396
Query: 193 EVARELFDELPER-----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCY 247
E EL + ++ ++ L++ + ++G + +L M G++ N +T
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGC-----LVGAKKSFE 302
+L R+L+E L + K GF+ + ++ F+ + K +
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Query: 303 AIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
P V ++NSL+ + A+E F + G P + ++ + +
Sbjct: 517 ITPT--VSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEK 574
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD--IESSVAVFESLTK-RTLECC--NSL 417
+ + ++K F + I + G C + E ++ F +L + R ++ N++
Sbjct: 575 AFEFYNESIKHSFKPDNYTCN---ILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTM 631
Query: 418 MTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS 477
+++ ++ +L M ++GL PD T+++ + L + T +LL F+ K
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET-DELLKKFSGKF 690
Query: 478 G 478
G
Sbjct: 691 G 691
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/498 (19%), Positives = 222/498 (44%), Gaps = 28/498 (5%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWC--FPPEQALHLYGEMGLLGI 137
++ + K +L AL +F+ M D V +++++ +C E+A+ Y M + I
Sbjct: 352 VNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRI 411
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
+S +++ C ++ +++ + ++++ F+ + + G + A
Sbjct: 412 APSSVLVHTMIQGCLKAESPEAALEIFNDSFE-SWIAHGFMCNKIFLLFCKQGKVDAATS 470
Query: 198 LFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
+ ++ N+ +N ++ C + ++ + + +S M G+EPN T+ L+
Sbjct: 471 FLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFF 530
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-----N 308
++ + + + F E+N + N +++ G AK+ + + E +
Sbjct: 531 KNKDEQNAWDVINQMNASNF-EANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 309 VISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHC 368
S+NS++ A+E + M G+SP+V + L+N ++ + L ++
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM-T 648
Query: 369 HALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTL----ECCNSLMTSLSHC 424
H +K + + A ALID + K +D++++ +F L + L NSL++ +
Sbjct: 649 HEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNL 708
Query: 425 GATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAA 484
G ++L+ M+++G+ D T++T + L + S L+ L G+ D
Sbjct: 709 GKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD--LYSELLDLGIVPDEI 766
Query: 485 VACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHAM 540
+ L++ S+ G + ++ E + +PN + ++++I G+ R G + + M
Sbjct: 767 LHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
Query: 541 VEKGLKPDEITFLCALTG 558
+EKG+ D+ F ++G
Sbjct: 827 LEKGIVHDDTVFNLLVSG 844
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 118/542 (21%), Positives = 230/542 (42%), Gaps = 38/542 (7%)
Query: 86 AFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPPE--QALHLYGEM-GLLGIR 138
A ++ R A+ +F + R D + ++L + A C P+ AL L EM G LG+
Sbjct: 248 ASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVP 307
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVAREL 198
+ T++SV+ + G E V+V +V FG +V +LV Y A +L
Sbjct: 308 ASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDL 367
Query: 199 FDELPERNLA----VWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
F+ + E LA +++V++ FC+ +E+++ +Y RM + P+ V +++ C
Sbjct: 368 FNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLK 427
Query: 255 HRRLNEGKKLQSCILKMGFVESNI---FVANALVDFYSACGCLVGAK---KSFEAIPVE- 307
E + I F ES I F+ N + + G + A K E +E
Sbjct: 428 A----ESPEAALEIFNDSF-ESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEP 482
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
NV+ +N+++ + + A +F+ M G P+ + L++ + ++ +
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 368 CHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR---TLECC--NSLMTSLS 422
F+ V + +I+ K + + ++L K ++ C NS++
Sbjct: 543 NQMNASNFEANEV-IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV 601
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS-GVEG 481
G T VE + M + G P+ VTF++ + S + ++ H +KS ++
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL-ALEMTH--EMKSMELKL 658
Query: 482 DAAVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVL 537
D +L+D + + ++ + +F L PN + S+I+G+ G + +
Sbjct: 659 DLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY 718
Query: 538 HAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR 597
MV G+ D T+ + G G + L+ + + G+ PD+ +V+ L +
Sbjct: 719 KKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL-GIVPDEILHMVLVNGLSK 777
Query: 598 AG 599
G
Sbjct: 778 KG 779
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 194/435 (44%), Gaps = 24/435 (5%)
Query: 180 GTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVE 239
+L F L +++V E+ ++ N+ +N ++ G+C+LG VEE+ Y S++ G++
Sbjct: 191 NSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLD 250
Query: 240 PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANAL--------VDFYSAC 291
P+ T+ L+ + L+ K+ + + G + + + + +D A
Sbjct: 251 PDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID--EAM 308
Query: 292 GCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLL 351
V K E P V ++ L+ ++ +AL L M+ G P++ + L+
Sbjct: 309 DLFVKMKDD-ECFPT--VRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 352 NSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTL 411
+S + +++ L+ G +V +ALI+ Y K IE +V V E + R L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGL-MPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 412 ECCNSLMTSLSHCGATQDVVELFGL---MIDEGLMPDEVTFSTTLKALSVSASATFTSSQ 468
L +V + G+ M++ ++PD VT+++ + S F S+
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDG--QCRSGNFDSAY 482
Query: 469 LLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGY 524
L G+ D S++D+ + VE + +F++L +PN + +T++I+GY
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 525 ARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPD 584
+ G + +L M+ K P+ +TF + G G +KE +L + M + G+QP
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI-GLQPT 601
Query: 585 QRHFSCMVDLLCRAG 599
+ ++ L + G
Sbjct: 602 VSTDTILIHRLLKDG 616
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 119/573 (20%), Positives = 233/573 (40%), Gaps = 71/573 (12%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPL----RDTVTYNLLISAWCFPP--EQALHLYGE 131
+T I + + +DL+SA VF+ MPL R+ V Y LI C ++A+ L+ +
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVK 313
Query: 132 MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
M T T++ ++ S E + + + + G N+ L+ +
Sbjct: 314 MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK 373
Query: 192 REVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCY 247
E AREL ++ E+ N+ +N L+ G+C+ G +E++++ M + PN T+
Sbjct: 374 FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Query: 248 LLK-VCSNHRRLNEG---KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
L+K C ++ G K L+ +L ++ N+L+D G A +
Sbjct: 434 LIKGYCKSNVHKAMGVLNKMLERKVL------PDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 304 IPVENVI----SWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
+ ++ ++ S++ + + +A +LF ++ G +P+V L++ +A +
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 360 IG-----LGKQI--HCHALKLGFDEGSVHAQSALIDMYGKCSD--IESSVAVFESLTKRT 410
+ L K + +C L F+ ALI +G C+D ++ + + E + K
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFN--------ALI--HGLCADGKLKEATLLEEKMVKIG 597
Query: 411 LECCNSLMTSLSH----CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTS 466
L+ S T L H G F M+ G PD T++T ++ +
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ--TYCREGRLLD 655
Query: 467 SQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMIN 522
++ + ++GV D SL+ Y G + + + + P+ F S+I
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Query: 523 GYARNGMGKQG------------------LAVLHAMVEKGLKPDEITFLCALTGCNHTGM 564
GKQ + +L MVE + P+ ++ + G G
Sbjct: 716 HLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGN 775
Query: 565 VKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR 597
++ +FD M+ G+ P + F+ ++ C+
Sbjct: 776 LRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 106/556 (19%), Positives = 215/556 (38%), Gaps = 78/556 (14%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPP-EQALHLYGE 131
V T N I+ + K + A+ V M R +T TYN LI +C +A+ + +
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNK 452
Query: 132 MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
M + T++S++ RSG ++ + G + + + +++
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 192 REVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCY 247
E A +LFD L ++ N+ ++ L+ G+C+ G V+E+ +M PN +TF
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI--- 304
L+ +L E L+ ++K+G ++ + L+ G A F+ +
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIG-LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS 631
Query: 305 -PVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNS---------- 353
+ ++ + + L DA ++ M+ G SP + + L+
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Query: 354 -----------CSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAV 402
C ++ L H +K G +GS A+ +M + ++ V +
Sbjct: 692 FDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM----EFDTVVEL 747
Query: 403 FESLTKRTL----ECCNSLMTSLSHCGATQDVVELFGLMI-DEGLMPDEVTFSTTLKALS 457
E + + ++ + L+ + G + ++F M +EG+ P E+ F+ L
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC-- 805
Query: 458 VSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICF 517
C LK E A ++D GH+ P
Sbjct: 806 --------------CCKLKKHNE-----AAKVVDDMICVGHL------------PQLESC 834
Query: 518 TSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKS 577
+I G + G ++G +V +++ G DE+ + + G G+V+ LF+ M+
Sbjct: 835 KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
Query: 578 VHGVQPDQRHFSCMVD 593
+G + + +S +++
Sbjct: 895 -NGCKFSSQTYSLLIE 909
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/489 (21%), Positives = 195/489 (39%), Gaps = 99/489 (20%)
Query: 107 DTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVH 164
D +TYN++IS +C E AL + M + T++++L SG ++ ++V
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 165 CRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER----NLAVWNVLLRGFCEL 220
R+++ +V L+ A +L DE+ +R ++ +NVL+ G C+
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
G ++E++ + + M G +PN +T +L+ + R + +KL + +L+ GF S +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS-VVT 346
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQ 336
N L++F G L A E +P N +S+N L+ + A+E M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 337 LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD- 395
G P + + +L + C D
Sbjct: 407 SRGCYPDIVTYNTMLTAL--------------------------------------CKDG 428
Query: 396 -IESSVAVFESLTKR----TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFS 450
+E +V + L+ + L N+++ L+ G T ++L M + L PD +T+S
Sbjct: 429 KVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYS 488
Query: 451 TTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS 510
SL+ SR G V+ +++ F
Sbjct: 489 -------------------------------------SLVGGLSREGKVDEAIKFFHEFE 511
Query: 511 ----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVK 566
PNA+ F S++ G ++ + + L M+ +G KP+E ++ + G + GM K
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 567 EGRILFDSM 575
E L + +
Sbjct: 572 EALELLNEL 580
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 193/474 (40%), Gaps = 83/474 (17%)
Query: 153 RSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER----NLA 208
R+G EG + +V G + ++ TL+ + +G A ++ + L ++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 209 VWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG-----KK 263
+NV++ G+C+ G + +L+ RM V P+ VT+ +L+ + +L + +
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 264 LQ----------SCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWN 313
LQ + +++ +S + A L+D GC +V+++N
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC------------TPDVVTYN 278
Query: 314 SLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNS-CSRAEEIGLGKQIHCHALK 372
LV+ L +A++ M G P+V + +L S CS + +++ L+
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD-AEKLLADMLR 337
Query: 373 LGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQ 428
GF SV + LI+ + + ++ + E + + + N L+
Sbjct: 338 KGFSP-SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 429 DVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACS 488
+E M+ G PD VT++T L AL
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALC------------------------------- 425
Query: 489 LMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKG 544
+ G VE +++I LSS P I + ++I+G A+ G + + +L M K
Sbjct: 426 ------KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 545 LKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRA 598
LKPD IT+ + G + G V E F + + G++P+ F+ ++ LC++
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM-GIRPNAVTFNSIMLGLCKS 532
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 6/221 (2%)
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVAC 487
+D +EL +D+G MPD F + S + + S+ +H L+S GD +
Sbjct: 222 KDAIEL----LDKGAMPDRECFVLLFE--SCANLKSLEHSKKVHDHFLQSKFRGDPKLNN 275
Query: 488 SLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKP 547
++ + C + + ++F+ + + + M+ Y+ NGMG L + M + GLKP
Sbjct: 276 MVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKP 335
Query: 548 DEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXX 607
+E TFL C G ++E + FDSMK+ HG+ P H+ ++ +L + G
Sbjct: 336 NEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQY 395
Query: 608 XXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVELDP 648
P + W ++ R H + ++ +++V++DP
Sbjct: 396 IRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 324 LLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ 383
L DA+EL G P V L SC+ + + K++H H L+ F G
Sbjct: 220 LYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKF-RGDPKLN 274
Query: 384 SALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLM 443
+ +I M+G+CS I + VF+ + + ++ + +M + S G D + LF M GL
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 444 PDEVTFSTTLKALSVSASATFTSSQLLHCFALKS--GVEGDAAVACSLMDAYSRCGH-VE 500
P+E TF T A A+ LH ++K+ G+ ++ +CGH VE
Sbjct: 335 PNEETFLTVFLAC---ATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVE 391
Query: 501 LSLQIFETLSSPNAICFTSMINGYAR 526
I + P A + +M N YAR
Sbjct: 392 AEQYIRDLPFEPTADFWEAMRN-YAR 416
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 237 GVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVG 296
G P+ F L + C+N + L KK+ L+ F + + N ++ + C +
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKF-RGDPKLNNMVISMFGECSSITD 289
Query: 297 AKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCS 355
AK+ F+ + +++ SW+ ++ +DN + DAL LF M G P+ + + + +C+
Sbjct: 290 AKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACA 348
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/551 (20%), Positives = 224/551 (40%), Gaps = 76/551 (13%)
Query: 88 IKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQALHLYGEMGLLGIRETSTTFSSV 147
I RD N+ L +F ++ ++ + +QA + +M G + +++ +
Sbjct: 148 IIKRDTNTYLTIFKSLSVKGGL-------------KQAPYALRKMREFGFVLNAYSYNGL 194
Query: 148 LAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER-- 205
+ + +S F E ++V+ R++ GF ++ +L+ + +G R + L E
Sbjct: 195 IHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM---VGLGKRRDIDSVMGLLKEMET 251
Query: 206 -----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNE 260
N+ + + +R G + E+ RM +G P+ VT+ L+ R+L+
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 261 GKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP----VENVISWNSLV 316
K++ +K G + + L+D +S L K+ + + V +V+++ LV
Sbjct: 312 AKEVFE-KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 317 SVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD 376
+A + VM+ G P++ + L+ R + ++ + LG
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV- 429
Query: 377 EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVE 432
+ + + ID YGK D S++ FE + + + CN+ + SL+ G ++ +
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDA 492
+F + D GL+PD VT++ +K S + L +++G E D V SL++
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYS--KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 493 YSRC-----------------------------------GHVELSLQIFETLSS----PN 513
+ G ++ ++++FE + PN
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 514 AICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFD 573
I F ++ + +N L +L M++ G PD T+ + G G VKE F
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667
Query: 574 SMKSVHGVQPD 584
MK + V PD
Sbjct: 668 QMKKL--VYPD 676
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 110/545 (20%), Positives = 228/545 (41%), Gaps = 34/545 (6%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPP--EQALHLYGEMGLL 135
Y+K EID IK L S + P D + N LI+ ++A ++ M +
Sbjct: 513 YSKVGEIDEAIK---LLSEMMENGCEP--DVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
++ T T++++LA ++G +E +++ +V+ G N TL +A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 196 RELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKV 251
++ ++ + ++ +N ++ G + G V+E++ ++ +M V P+ VT C LL
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPG 686
Query: 252 CSNHRRLNEGKKLQSCIL-KMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVI 310
+ + K+ + L +N+F + + + G + SF V N I
Sbjct: 687 VVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG--IDNAVSFSERLVANGI 744
Query: 311 SWNS------LVSVNADNDLLCDALELF-TVMQLWGQSPSVRSLVGLLNSCSRAEEIGLG 363
+ ++ + ++ + A LF + G P + + L+ A+ I +
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC----NSLMT 419
+ + G V + L+D YGK I+ +++ ++ E N +++
Sbjct: 805 QDVFLQVKSTGCIP-DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 420 SLSHCGATQDVVELF-GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSG 478
L G D ++L+ LM D P T+ + LS S + + QL L G
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR-LYEAKQLFEGM-LDYG 921
Query: 479 VEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGL 534
+ A+ L++ + + G + + +F+ + P+ ++ +++ G +GL
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 535 AVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDL 594
+ E GL PD + + + G + ++E +LF+ MK+ G+ PD ++ ++
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 595 LCRAG 599
L AG
Sbjct: 1042 LGIAG 1046
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 108/514 (21%), Positives = 196/514 (38%), Gaps = 97/514 (18%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPPEQALHLYGEM 132
VYT I ++ +N A + M D VTY +LI A C
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC------------- 304
Query: 133 GLLGIRETSTTFSSVLAVCARSGFHREGVQVHC--RVVKFGFLSNVFVGGTLVGFYLNVG 190
T+ CA+ F + H RV L F N
Sbjct: 305 -------TARKLD-----CAKEVFEKMKTGRHKPDRVTYITLLDR---------FSDNRD 343
Query: 191 LREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTF- 245
L V ++ + E+ + ++ + +L+ C+ G E+ + M G+ PN T+
Sbjct: 344 LDSV-KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 246 ---CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFE 302
C LL+V RL++ +L + +G V+ + +D+Y G V A ++FE
Sbjct: 403 TLICGLLRV----HRLDDALELFGNMESLG-VKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 303 AIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAE 358
+ + N+++ N+ + A +A ++F ++ G P + ++ S+
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 359 EIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVF----ESLTKRTLECC 414
EI ++ ++ G E V ++LI+ K ++ + +F E K T+
Sbjct: 518 EIDEAIKLLSEMMENGC-EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576
Query: 415 NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFA 474
N+L+ L G Q+ +ELF M+ +G P+ +TF+T L + T L
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF---- 632
Query: 475 LKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGL 534
+MD G V P+ + ++I G +NG K+ +
Sbjct: 633 -------------KMMDM----GCV------------PDVFTYNTIIFGLVKNGQVKEAM 663
Query: 535 AVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
H M +K + PD +T L G ++++
Sbjct: 664 CFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDA 696
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 153/374 (40%), Gaps = 52/374 (13%)
Query: 195 ARELFDELP-----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLL 249
AR LF++ + L +N+L+ G E +E + + + ++ G P+ T+ +LL
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 250 KVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV 309
+++E L + Y + EA N
Sbjct: 828 DAYGKSGKIDE-----------------------LFELYKEM-----STHECEA----NT 855
Query: 310 ISWNSLVS--VNADNDLLCDALELF-TVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQI 366
I+ N ++S V A N + DAL+L+ +M SP+ + L++ S++ + KQ+
Sbjct: 856 ITHNIVISGLVKAGN--VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 367 HCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR----TLECCNSLMTSLS 422
L G + + LI+ +GK + +++ A+F+ + K L+ + L+ L
Sbjct: 914 FEGMLDYGC-RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC 972
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGD 482
G + + F + + GL PD V ++ + L S + L + G+ D
Sbjct: 973 MVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE-EALVLFNEMKTSRGITPD 1031
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLH 538
SL+ G VE + +I+ + PN F ++I GY+ +G + AV
Sbjct: 1032 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Query: 539 AMVEKGLKPDEITF 552
MV G P+ T+
Sbjct: 1092 TMVTGGFSPNTGTY 1105
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 127/291 (43%), Gaps = 15/291 (5%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRD----TVTYNLLISAWCFPP--EQALHLYG 130
V T N +DA+ KS ++ ++ M + T+T+N++IS + AL LY
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 131 E-MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNV 189
+ M T+ T+ ++ ++SG E Q+ ++ +G N + L+ +
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 190 GLREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTF 245
G + A LF + + +L ++VL+ C +G V+E L+Y+ + G+ P+ V +
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 246 CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP 305
++ RL E L + + + +++ N+L+ G + A K + I
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 306 ----VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLN 352
NV ++N+L+ + + A ++ M G SP+ + L N
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 136/338 (40%), Gaps = 49/338 (14%)
Query: 306 VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI----G 361
V N S+N L+ + + +A+E++ M L G PS+++ L+ + +I G
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 362 LGKQIHCHALK------------LGF---------------DEG---SVHAQSALIDMYG 391
L K++ LK LG DEG V + LID
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 392 KCSDIESSVAVFESL-TKRTLECCNSLMTSLSHCGATQD---VVELFGLMIDEGLMPDEV 447
++ + VFE + T R + +T L +D V + + M +G +PD V
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 448 TFSTTLKALSVSAS--ATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQI 505
TF+ + AL + + F + ++ + + + C L+ R ++ +L++
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL----RVHRLDDALEL 420
Query: 506 FETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNH 561
F + S P A + I+ Y ++G L M KG+ P+ + +L
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 562 TGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
G +E + +F +K + G+ PD ++ M+ + G
Sbjct: 481 AGRDREAKQIFYGLKDI-GLVPDSVTYNMMMKCYSKVG 517
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 187/424 (44%), Gaps = 65/424 (15%)
Query: 94 NSALAV--FHTMPLRD----TVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFS 145
NSALA+ F M R+ V Y+++I + C + AL L+ EM + GI+ T+S
Sbjct: 225 NSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
Query: 146 SVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER 205
S++ G +G ++ ++ + +V L+ ++ G A+EL++E+ R
Sbjct: 285 SLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 206 NLA----VWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
+A +N L+ GFC+ C+ E+ + M G EP+ VT+ L+ +R+++G
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFE-----AIPVENVISWNSLV 316
+L I G + N N LV + G L AK+ F+ +P +V+++ L+
Sbjct: 405 MRLFREISSKGLI-PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP-PSVVTYGILL 462
Query: 317 SVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD 376
DN L ALE+F MQ + LG I+
Sbjct: 463 DGLCDNGELNKALEIFEKMQ--------------------KSRMTLGIGIYN-------- 494
Query: 377 EGSVHAQSALIDMYGKC--SDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDV 430
I ++G C S ++ + ++F SL+ + ++ N ++ L G+ +
Sbjct: 495 ----------IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 431 VELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLM 490
LF M ++G PD+ T++ ++A + S +S +L+ + G D++ ++
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRA-HLGGSGLISSVELIEEMKV-CGFSADSSTIKMVI 602
Query: 491 DAYS 494
D S
Sbjct: 603 DMLS 606
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/503 (19%), Positives = 201/503 (39%), Gaps = 91/503 (18%)
Query: 107 DTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVH 164
DT+T++ L++ +C +A+ L M + R T S+++ G E + +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 165 CRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAV----WNVLLRGFCEL 220
R+V++GF + G ++ G +A +LF ++ ERN+ +++++ C+
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
G +++L+ ++ M G++ + VT+ L+ N + ++G K+ + NI
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR-----EMIGRNI-- 311
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
IP +V+++++L+ V L +A EL+ M G
Sbjct: 312 -----------------------IP--DVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Query: 341 SPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFD-------EGSVHAQSALIDMYGKC 393
+P + L++ G K+ H FD E + S LI+ Y K
Sbjct: 347 APDTITYNSLID--------GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 394 SDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL 453
++ + +F ++ + GL+P+ +T++T +
Sbjct: 399 KRVDDGMRLFREISSK-------------------------------GLIPNTITYNTLV 427
Query: 454 KALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPN 513
L S +++ L + GV L+D G + +L+IFE +
Sbjct: 428 --LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 514 AI----CFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGR 569
+ +I+G ++ ++ +KG+KPD +T+ + G G + E
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 570 ILFDSMKSVHGVQPDQRHFSCMV 592
+LF MK G PD ++ ++
Sbjct: 546 MLFRKMKE-DGCTPDDFTYNILI 567
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 126/592 (21%), Positives = 223/592 (37%), Gaps = 131/592 (22%)
Query: 93 LNSALAVFHTM----PLRDTVTYNLLISAWCFPPEQALHLY--GEMGLLGIRETSTTFSS 146
+N A+ +F +M PL + +N L SA + L L M L GI T +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 147 VLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER- 205
++ R V R K G+ + TLV + G A L D + E
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 206 ---NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLL-KVCSNHRR---L 258
+L + L+ G C G V E+L RM G +P+ VT+ +L ++C + L
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSV 318
+ +K++ +K V+ +I + + D SF+
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKD------------GSFD---------------- 262
Query: 319 NADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEG 378
DAL LF M++ G V + L+ GL C+ K +D+G
Sbjct: 263 --------DALSLFNEMEMKGIKADVVTYSSLIG--------GL-----CNDGK--WDDG 299
Query: 379 SVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMI 438
+ L +M G+ +I V F ++L+ G + EL+ MI
Sbjct: 300 A----KMLREMIGR--NIIPDVVTF-----------SALIDVFVKEGKLLEAKELYNEMI 342
Query: 439 DEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGH 498
G+ PD +T+++ + + ++Q+ K G E D L+++Y +
Sbjct: 343 TRGIAPDTITYNSLIDGFC-KENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKR 400
Query: 499 VELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
V+ +++F +SS PN I + +++ G+ ++G + MV +G+ P +T+
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 555 ALTGCNHTGMVKEGRILFDSMK----------------------------------SVHG 580
L G G + + +F+ M+ S G
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 581 VQPDQRHFSCMVDLLCRAGXXXXXXXXXXQ------TPDKRDCFMWSSLLRS 626
V+PD ++ M+ LC+ G + TPD F ++ L+R+
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD---FTYNILIRA 569
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 224/523 (42%), Gaps = 80/523 (15%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPPEQALHLYGEM 132
V+T N ID K D+ +A +F M R DTVTYN +I +G++
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG-----------FGKV 310
Query: 133 GLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLR 192
G L +T F + +C ++C KFG L +GL
Sbjct: 311 GRLD--DTVCFFEEMKDMCCEPDVITYNALINC-FCKFG--------------KLPIGL- 352
Query: 193 EVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
E RE+ + N+ ++ L+ FC+ G +++++ +Y M G+ PN T+ L+
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP----VEN 308
L++ +L + +L++G VE N+ AL+D + A++ F + + N
Sbjct: 413 CKIGNLSDAFRLGNEMLQVG-VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 309 VISWNSLVS--VNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQI 366
+ S+N+L+ V A N + ALEL ++ G P + + E+I K +
Sbjct: 472 LASYNALIHGFVKAKN--MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 367 HCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGA 426
+ G S+ + L+D Y K + + + + + + +E +T ++ C
Sbjct: 530 MNEMKECGIKANSL-IYTTLMDAYFKSGNPTEGLHLLDEMKELDIE-----VTVVTFC-- 581
Query: 427 TQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVA 486
++ID GL +++ VS + + + + G++ +AA+
Sbjct: 582 ---------VLID-GLCKNKL----------VSKAVDYFNR-----ISNDFGLQANAAIF 616
Query: 487 CSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVE 542
+++D + VE + +FE + P+ +TS+++G + G + LA+ M E
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Query: 543 KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQ 585
G+K D + + + G +H +++ R + M G+ PD+
Sbjct: 677 IGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG-EGIHPDE 718
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 120/545 (22%), Positives = 216/545 (39%), Gaps = 99/545 (18%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLRDTV-----------------TYNLLISAWCF 120
++K + F K+R N L F + D V TYN++I C
Sbjct: 215 FSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK 274
Query: 121 PP--EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFV 178
E A L+ EM G+ + T++S++ GF K G L +
Sbjct: 275 EGDVEAARGLFEEMKFRGLVPDTVTYNSMI-----DGFG-----------KVGRLDDT-- 316
Query: 179 GGTLVGFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGV 238
V F+ E+ D E ++ +N L+ FC+ G + L +Y M +G+
Sbjct: 317 ----VCFF---------EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 239 EPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAK 298
+PN V++ L+ + + K + ++G V N + +L+D G L A
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV-PNEYTYTSLIDANCKIGNLSDAF 422
Query: 299 K---SFEAIPVE-NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSC 354
+ + VE NV+++ +L+ D + + +A ELF M G P++ S L++
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 355 SRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECC 414
+A+ + AL+L +E + +YG + + SL K +E
Sbjct: 483 VKAKNMD-------RALEL-LNELKGRGIKPDLLLYG------TFIWGLCSLEK--IEAA 526
Query: 415 NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFA 474
+M + CG + + + ++T + A S + T + LH
Sbjct: 527 KVVMNEMKECG----------------IKANSLIYTTLMDAYFKSGNPT----EGLHLLD 566
Query: 475 LKSGVEGDAAVA--CSLMDAYSRCGHVELSLQIFETLSS-----PNAICFTSMINGYARN 527
++ + V C L+D + V ++ F +S+ NA FT+MI+G ++
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 528 GMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRH 587
+ + MV+KGL PD + + G G V E L D M + G++ D
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI-GMKLDLLA 685
Query: 588 FSCMV 592
++ +V
Sbjct: 686 YTSLV 690
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/471 (18%), Positives = 196/471 (41%), Gaps = 55/471 (11%)
Query: 143 TFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL 202
F ++ +V G E +Q ++ +F L+ + +G + + F ++
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 203 ----PERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRL 258
+ +N+++ C+ G VE + + M F G+ P+ VT+ ++ RL
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 259 NEGKKLQSCI---LKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP----VENVIS 311
++ C +K E ++ NAL++ + G L + + + NV+S
Sbjct: 314 DD----TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
+++LV ++ A++ + M+ G P+ + L+++ + + ++ L
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVV 431
++G E +V +ALID G C D E ++
Sbjct: 430 QVGV-EWNVVTYTALID--GLC-DAER----------------------------MKEAE 457
Query: 432 ELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS-GVEGDAAVACSLM 490
ELFG M G++P+ +++ + V A + +LL+ LK G++ D + + +
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGF-VKAKNMDRALELLN--ELKGRGIKPDLLLYGTFI 514
Query: 491 DAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLK 546
+E + + + N++ +T++++ Y ++G +GL +L M E ++
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 547 PDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR 597
+TF + G +V + F+ + + G+Q + F+ M+D LC+
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 172/400 (43%), Gaps = 27/400 (6%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPP--EQALHLYG 130
V T N I+ F K L L + M + V+Y+ L+ A+C +QA+ Y
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
+M +G+ T++S++ + G + ++ +++ G NV L+ +
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 191 LREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTF- 245
+ A ELF ++ NLA +N L+ GF + ++ +L + + G++P+ + +
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 246 CYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGC------LVGAKK 299
++ +CS + E K+ +K +++N + L+D Y G L+ K
Sbjct: 512 TFIWGLCSLEKI--EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 300 SFEAIPVENVISWNSLVSVNADNDLLCDALELFT-VMQLWGQSPSVRSLVGLLNSCSRAE 358
+ I V V+++ L+ N L+ A++ F + +G + +++ +
Sbjct: 570 ELD-IEV-TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 359 EIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLT----KRTLECC 414
++ + ++ G A ++L+D K ++ ++A+ + + K L
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRT-AYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Query: 415 NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
SL+ LSHC Q MI EG+ PDEV + LK
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/462 (18%), Positives = 195/462 (42%), Gaps = 53/462 (11%)
Query: 152 ARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDEL-PERNL--- 207
R+GF + V+ +C V F + ++ V + L + ++FD L RN+
Sbjct: 134 TRNGF-KHSVESYCIVAHILFCARMYYDANSV--LKEMVLSKADCDVFDVLWSTRNVCVP 190
Query: 208 --AVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQ 265
V++ L +LG +EE++ +S+M V P + LL + + ++ K+
Sbjct: 191 GFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 250
Query: 266 SCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIP----VENVISWNSLVSVNAD 321
++ G +F N ++D G + A+ FE + V + +++NS++
Sbjct: 251 KDMIGAG-ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
L D + F M+ P V + L+N + ++ +G + + +K + +V
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY-REMKGNGLKPNVV 368
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEG 441
+ S L+D + C + G Q ++ + M G
Sbjct: 369 SYSTLVDAF--CKE-----------------------------GMMQQAIKFYVDMRRVG 397
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVEL 501
L+P+E T+++ + A + + L L+ GVE + +L+D ++
Sbjct: 398 LVPNEYTYTSLIDA--NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKE 455
Query: 502 SLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALT 557
+ ++F + + PN + ++I+G+ + + L +L+ + +G+KPD + + +
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 558 GCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
G ++ +++ + MK G++ + ++ ++D ++G
Sbjct: 516 GLCSLEKIEAAKVVMNEMKEC-GIKANSLIYTTLMDAYFKSG 556
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 211/527 (40%), Gaps = 92/527 (17%)
Query: 61 FIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLIS 116
F+ + T P+ VY N ID+FI++ LN A+ + M + + TYN LI
Sbjct: 351 FVLKEMTKKGFPPNVIVY--NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 117 AWCF--PPEQALHLYGEMGLLGIRETSTTFSSVLAV-CARSGFHREGVQVHCRVVKFGFL 173
+C + A L EM +G +F+SV+ + C+ F R V L
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA-----LRFVGEMLL 463
Query: 174 SNVFVGG----TLVGFYLNVGLREVARELFDELPERNLAV----WNVLLRGFCELGCVEE 225
N+ GG TL+ G A EL+ + + V N LL G CE G ++E
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 226 SLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALV 285
+ + G + V++ L+ C ++L+E ++K G N + + L+
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN-YTYSILI 582
Query: 286 DFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVR 345
CG L K EAI + N G P V
Sbjct: 583 -----CG-LFNMNKVEEAIQFWDDCKRN-------------------------GMLPDVY 611
Query: 346 SLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFES 405
+ +++ C +AE G++ FDE M K +++ + V+
Sbjct: 612 TYSVMIDGCCKAERTEEGQEF--------FDE-----------MMSK--NVQPNTVVY-- 648
Query: 406 LTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFT 465
N L+ + G +EL M +G+ P+ T+++ +K +S+ +
Sbjct: 649 ---------NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE-- 697
Query: 466 SSQLLHCFALKSGVEGDAAVACSLMDAYSRCGH-VELSLQIFETLSS---PNAICFTSMI 521
++LL G+E + +L+D Y + G V++ + E S PN I +T MI
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 522 NGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
GYAR+G + +L+ M EKG+ PD IT+ + G G V E
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 122/559 (21%), Positives = 230/559 (41%), Gaps = 104/559 (18%)
Query: 112 NLLISAWCFPPEQ-----ALHLYGEMGLLGIRETSTTFSSVLAVCARSG-FHR--EGVQV 163
+LLI +C ++ AL ++ + G+ + TT + +L R+ F + E V
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 164 HCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER----NLAVWNVLLRGFCE 219
C+ G +V++ T + + G E A +LF ++ E N+ +N ++ G
Sbjct: 252 VCK----GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 307
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
G +E+ + +M G+EP +T+ L+K + +R+ + + + K GF N+
Sbjct: 308 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF-PPNVI 366
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVENVI----------SWNSLV-----SVNADND- 323
V N L+D + G L +AI +++++ ++N+L+ + ADN
Sbjct: 367 VYNNLIDSFIEAGSLN------KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Query: 324 -----------------------LLCD------ALELFTVMQLWGQSPSVRSLVGLLNSC 354
LLC AL M L SP L L++
Sbjct: 421 RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 355 SRAEEIGLGKQIHCHALKLGF---DEGSV---HAQSALIDMYGKCSDIESSVAVFESLTK 408
+ GK H AL+L F ++G V +AL+ + ++ + + + +
Sbjct: 481 CKH-----GK--HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 409 RTLECCN---SLMTSLSHCGATQDVVELFGL---MIDEGLMPDEVTFSTTLKAL----SV 458
R C S T +S C + + E F M+ GL PD T+S + L V
Sbjct: 534 RG--CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 459 SASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNA 514
+ F ++G+ D ++D + E + F+ + S PN
Sbjct: 592 EEAIQFWDD------CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 515 ICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDS 574
+ + +I Y R+G L + M KG+ P+ T+ + G + V+E ++LF+
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 575 MKSVHGVQPDQRHFSCMVD 593
M+ + G++P+ H++ ++D
Sbjct: 706 MR-MEGLEPNVFHYTALID 723
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 119/568 (20%), Positives = 211/568 (37%), Gaps = 103/568 (18%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMP----LRDTVTYNLLISA--WCFPPEQALHLYG 130
VY I+AF K + A+ +F M + VT+N +I C ++A
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 319
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
+M G+ T T+S ++ R+ + V + K GF NV V L+ ++ G
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Query: 191 LREVARELFDELPERNLAV----WNVLLRGFCELG------------------------- 221
A E+ D + + L++ +N L++G+C+ G
Sbjct: 380 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 222 ---CV-------EESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKM 271
C+ + +L + M + P G L+ H + ++ +L L
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIP----VENVISWNSLVSVNADNDLLCD 327
GFV + +NAL+ G L A + + I V + +S+N+L+S L +
Sbjct: 500 GFV-VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 328 ALELFTVMQLWGQSPSVRS----LVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ 383
A M G P + + GL N E I + + V+
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-----PDVYTY 613
Query: 384 SALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLM 443
S +ID CC + T++ E F M+ + +
Sbjct: 614 SVMID-----------------------GCCKA--------ERTEEGQEFFDEMMSKNVQ 642
Query: 444 PDEVTFSTTLKALSVSASATFT---SSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE 500
P+ V ++ ++A S + + H G+ ++A SL+ S VE
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKH-----KGISPNSATYTSLIKGMSIISRVE 697
Query: 501 LSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL 556
+ +FE + PN +T++I+GY + G + +L M K + P++IT+ +
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 557 TGCNHTGMVKEGRILFDSMKSVHGVQPD 584
G G V E L + M+ G+ PD
Sbjct: 758 GGYARDGNVTEASRLLNEMRE-KGIVPD 784
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 211/527 (40%), Gaps = 92/527 (17%)
Query: 61 FIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLIS 116
F+ + T P+ VY N ID+FI++ LN A+ + M + + TYN LI
Sbjct: 351 FVLKEMTKKGFPPNVIVY--NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 117 AWCF--PPEQALHLYGEMGLLGIRETSTTFSSVLAV-CARSGFHREGVQVHCRVVKFGFL 173
+C + A L EM +G +F+SV+ + C+ F R V L
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA-----LRFVGEMLL 463
Query: 174 SNVFVGG----TLVGFYLNVGLREVARELFDELPERNLAV----WNVLLRGFCELGCVEE 225
N+ GG TL+ G A EL+ + + V N LL G CE G ++E
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 226 SLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALV 285
+ + G + V++ L+ C ++L+E ++K G N + + L+
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN-YTYSILI 582
Query: 286 DFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVR 345
CG L K EAI + N G P V
Sbjct: 583 -----CG-LFNMNKVEEAIQFWDDCKRN-------------------------GMLPDVY 611
Query: 346 SLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFES 405
+ +++ C +AE G++ FDE M K +++ + V+
Sbjct: 612 TYSVMIDGCCKAERTEEGQEF--------FDE-----------MMSK--NVQPNTVVY-- 648
Query: 406 LTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFT 465
N L+ + G +EL M +G+ P+ T+++ +K +S+ +
Sbjct: 649 ---------NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE-- 697
Query: 466 SSQLLHCFALKSGVEGDAAVACSLMDAYSRCGH-VELSLQIFETLSS---PNAICFTSMI 521
++LL G+E + +L+D Y + G V++ + E S PN I +T MI
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 522 NGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
GYAR+G + +L+ M EKG+ PD IT+ + G G V E
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 122/559 (21%), Positives = 230/559 (41%), Gaps = 104/559 (18%)
Query: 112 NLLISAWCFPPEQ-----ALHLYGEMGLLGIRETSTTFSSVLAVCARSG-FHR--EGVQV 163
+LLI +C ++ AL ++ + G+ + TT + +L R+ F + E V
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 164 HCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER----NLAVWNVLLRGFCE 219
C+ G +V++ T + + G E A +LF ++ E N+ +N ++ G
Sbjct: 252 VCK----GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 307
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
G +E+ + +M G+EP +T+ L+K + +R+ + + + K GF N+
Sbjct: 308 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF-PPNVI 366
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVENVI----------SWNSLV-----SVNADND- 323
V N L+D + G L +AI +++++ ++N+L+ + ADN
Sbjct: 367 VYNNLIDSFIEAGSLN------KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Query: 324 -----------------------LLCD------ALELFTVMQLWGQSPSVRSLVGLLNSC 354
LLC AL M L SP L L++
Sbjct: 421 RLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL 480
Query: 355 SRAEEIGLGKQIHCHALKLGF---DEGSV---HAQSALIDMYGKCSDIESSVAVFESLTK 408
+ GK H AL+L F ++G V +AL+ + ++ + + + +
Sbjct: 481 CKH-----GK--HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 409 RTLECCN---SLMTSLSHCGATQDVVELFGL---MIDEGLMPDEVTFSTTLKAL----SV 458
R C S T +S C + + E F M+ GL PD T+S + L V
Sbjct: 534 RG--CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 459 SASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNA 514
+ F ++G+ D ++D + E + F+ + S PN
Sbjct: 592 EEAIQFWDD------CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 515 ICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDS 574
+ + +I Y R+G L + M KG+ P+ T+ + G + V+E ++LF+
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 575 MKSVHGVQPDQRHFSCMVD 593
M+ + G++P+ H++ ++D
Sbjct: 706 MR-MEGLEPNVFHYTALID 723
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 119/568 (20%), Positives = 211/568 (37%), Gaps = 103/568 (18%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMP----LRDTVTYNLLISA--WCFPPEQALHLYG 130
VY I+AF K + A+ +F M + VT+N +I C ++A
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 319
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
+M G+ T T+S ++ R+ + V + K GF NV V L+ ++ G
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Query: 191 LREVARELFDELPERNLAV----WNVLLRGFCELG------------------------- 221
A E+ D + + L++ +N L++G+C+ G
Sbjct: 380 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 222 ---CV-------EESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKM 271
C+ + +L + M + P G L+ H + ++ +L L
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Query: 272 GFVESNIFVANALVDFYSACGCLVGAKKSFEAIP----VENVISWNSLVSVNADNDLLCD 327
GFV + +NAL+ G L A + + I V + +S+N+L+S L +
Sbjct: 500 GFV-VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 328 ALELFTVMQLWGQSPSVRS----LVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ 383
A M G P + + GL N E I + + V+
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-----PDVYTY 613
Query: 384 SALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLM 443
S +ID CC + T++ E F M+ + +
Sbjct: 614 SVMID-----------------------GCCKA--------ERTEEGQEFFDEMMSKNVQ 642
Query: 444 PDEVTFSTTLKALSVSASATFT---SSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE 500
P+ V ++ ++A S + + H G+ ++A SL+ S VE
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKH-----KGISPNSATYTSLIKGMSIISRVE 697
Query: 501 LSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL 556
+ +FE + PN +T++I+GY + G + +L M K + P++IT+ +
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 557 TGCNHTGMVKEGRILFDSMKSVHGVQPD 584
G G V E L + M+ G+ PD
Sbjct: 758 GGYARDGNVTEASRLLNEMRE-KGIVPD 784
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 191/456 (41%), Gaps = 33/456 (7%)
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL----NVGLRE-V 194
TS+ F V+ +R + + + GF+ V ++ + N+ E V
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
+E+ + N+ +N+L+RGFC G ++ +L + +M G PN VT+ L+
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE------- 307
R++++G KL + G +E N+ N +++ C G K + E
Sbjct: 253 LRKIDDGFKLLRSMALKG-LEPNLISYNVVINGL----CREGRMKEVSFVLTEMNRRGYS 307
Query: 308 -NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQI 366
+ +++N+L+ AL + M G +PSV + L++S +A + +
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 367 HCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR----TLECCNSLMTSLS 422
G + L+D + + + + V + ++ N+L+
Sbjct: 368 LDQMRVRGLCPNE-RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN--G 424
Query: 423 HC--GATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
HC G +D + + M ++GL PD V++ST L S + + ++ G++
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV--DEALRVKREMVEKGIK 482
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETL----SSPNAICFTSMINGYARNGMGKQGLAV 536
D SL+ + + + ++E + P+ +T++IN Y G ++ L +
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 537 LHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILF 572
+ MVEKG+ PD +T+ + G N +E + L
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 106/520 (20%), Positives = 220/520 (42%), Gaps = 43/520 (8%)
Query: 77 VYTKNREIDAFIKS-RDLNSALAVFHTM------PLRDTVTYNLLISAWCFPP--EQALH 127
V + N +DA I+S R+++ A VF M P + TYN+LI +CF + AL
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP--NVFTYNILIRGFCFAGNIDVALT 226
Query: 128 LYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL 187
L+ +M G T+++++ + +G ++ + G N+ ++
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 188 NVGLREVARELFDELPERNLAV----WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGV 243
G + + E+ R ++ +N L++G+C+ G ++L ++ M G+ P+ +
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 244 TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
T+ L+ +N + + G N LVD +S G + A +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 304 IP----VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
+ +V+++N+L++ + + DA+ + M+ G SP V S +L+ R+ +
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 360 IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMT 419
+ ++ ++ G ++ S+LI + + + + ++E + + L T
Sbjct: 466 VDEALRVKREMVEKGIKPDTI-TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 420 SL--SHC--GATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFAL 475
+L ++C G + ++L M+++G++PD VT+S + L+ S T + +LL
Sbjct: 525 ALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN-KQSRTREAKRLLLKLFY 583
Query: 476 KSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLA 535
+ V D + C ++E S+I G+ GM +
Sbjct: 584 EESVPSDVTYHTLI----ENCSNIEFK-------------SVVSLIKGFCMKGMMTEADQ 626
Query: 536 VLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSM 575
V +M+ K KPD + + G G +++ L+ M
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/453 (20%), Positives = 192/453 (42%), Gaps = 25/453 (5%)
Query: 208 AVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK-VCSNHRRLNEGKKLQS 266
+V++++++ + L ++++L+ G P +++ +L + R ++ + +
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 267 CILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE----NVISWNSLVSVNADN 322
+L+ V N+F N L+ + G + A F+ + + NV+++N+L+
Sbjct: 195 EMLE-SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 323 DLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHA 382
+ D +L M L G P++ S ++N R + + + G+ V
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV-T 312
Query: 383 QSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVELFGLMI 438
+ LI Y K + ++ + + + L SL+ S+ G +E M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 439 DEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGH 498
GL P+E T++T + S L +G +L++ + G
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN--DNGFSPSVVTYNALINGHCVTGK 430
Query: 499 VELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
+E ++ + E + SP+ + ++++++G+ R+ + L V MVEKG+KPD IT+
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 555 ALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDK 614
+ G KE L++ M V G+ PD+ ++ +++ C G + +K
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 615 ---RDCFMWSSLLRSCRSHKNEEVGTRAAQVLV 644
D +S L+ N++ TR A+ L+
Sbjct: 550 GVLPDVVTYSVLINGL----NKQSRTREAKRLL 578
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 10/191 (5%)
Query: 74 SDCVYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWC--FPPEQALH 127
S V T N I+ + + A+AV M + D V+Y+ ++S +C + ++AL
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 128 LYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL 187
+ EM GI+ + T+SS++ +E ++ +++ G + F L+ Y
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 188 NVGLREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGV 243
G E A +L +E+ E+ ++ ++VL+ G + E+ ++ ++ P+ V
Sbjct: 532 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 591
Query: 244 TFCYLLKVCSN 254
T+ L++ CSN
Sbjct: 592 TYHTLIENCSN 602
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 25/216 (11%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFP--PEQALHLYGEMGLLGI 137
+ F +S D++ AL V M + DT+TY+ LI +C ++A LY EM +G+
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV-GFYLNVGLREVAR 196
T+++++ G + +Q+H +V+ G L +V L+ G RE R
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 197 ELFDELPER----------------NLAVWNV--LLRGFCELGCVEESLNYYSRMCFDGV 238
L E N+ +V L++GFC G + E+ + M
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 239 EPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFV 274
+P+G + ++ + + L ++K GF+
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 206/496 (41%), Gaps = 57/496 (11%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVF-HTMPL---RDTVTYNLLISAWCFP--PEQALHLYG 130
+YT + I+ F + R L+ A + M L DTV +N L++ C +AL L
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
M +G + T T ++++ +G + V + R+V+ GF N G ++ G
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 191 LREVARELFDELPERNLAV----WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFC 246
+A EL ++ ERN+ + +++++ G C+ G ++ + N ++ M G + + +T+
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 247 YLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGA----KKSFE 302
L+ N R ++G KL ++K + N+ + L+D + G L A K+ +
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRK-ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 303 AIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
N I++NSL+ + L +A+++ +M G P + + L+N +A I
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLS 422
G ++ F E S+ A Y N+L+
Sbjct: 422 GLEL--------FREMSLRGVIANTVTY------------------------NTLVQGFC 449
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFAL--KSGVE 480
G + +LF M+ + PD V++ L L + + L F KS +E
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL----EKALEIFGKIEKSKME 505
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAV 536
D + ++ V+ + +F +L +A + MI+ R + +
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 537 LHAMVEKGLKPDEITF 552
M E+G PDE+T+
Sbjct: 566 FRKMTEEGHAPDELTY 581
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 122/582 (20%), Positives = 244/582 (41%), Gaps = 76/582 (13%)
Query: 94 NSALAVFHTM----PLRDTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSV 147
+ A+ +F M PL + +N L SA E L L +M GI + T S +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 148 LAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV-GFYLNVGLREVARELFDELPER- 205
+ R +++K G+ + + TL+ G L + E A EL D + E
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE-ALELVDRMVEMG 188
Query: 206 ---NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKV-CSNHRR---L 258
L N L+ G C G V +++ RM G +PN VT+ +L V C + + +
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 259 NEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE----NVISWNS 314
+K++ +K+ V+ +I ++D G L A F + ++ ++I++N+
Sbjct: 249 ELLRKMEERNIKLDAVKYSI-----IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
L+ + D +L M SP+V + L++S + ++ Q+ ++ G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF 434
++ S LID + K + +E ++ ++
Sbjct: 364 IAPNTITYNS-LIDGFCKENRLEEAI-------------------------------QMV 391
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYS 494
LMI +G PD +TF+ + A+ +L +L+ GV + +L+ +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYC-KANRIDDGLELFREMSLR-GVIANTVTYNTLVQGFC 449
Query: 495 RCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEI 550
+ G +E++ ++F+ + S P+ + + +++G NG ++ L + + + ++ D
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Query: 551 TFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR------AGXXXXX 604
++ + G + V + LF S+ + GV+ D R ++ M+ LCR A
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSL-PLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 605 XXXXXQTPDKRDCFMWSSLLRSCRSHKNEEVGTRAAQVLVEL 646
PD+ ++ L+ R+H ++ T AA+++ E+
Sbjct: 569 MTEEGHAPDE---LTYNILI---RAHLGDDDATTAAELIEEM 604
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 179/421 (42%), Gaps = 54/421 (12%)
Query: 107 DTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVH 164
D V Y+++I C + A +L+ EM + G + T+++++ +G +G ++
Sbjct: 262 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLL 321
Query: 165 CRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLA----VWNVLLRGFCEL 220
++K NV L+ ++ G A +L E+ +R +A +N L+ GFC+
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
+EE++ M G +P+ +TF L+ R+++G +L + G + +N
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI-ANTVT 440
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQ 340
N LV + G L AKK F+ + V +VS D LCD EL ++++G+
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRV--RPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 341 SPSVRSLVGLLNSCSRAE-EIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKC--SDIE 397
S+ E +IG+ +I ++G C S ++
Sbjct: 499 IEK-----------SKMELDIGI----------------------YMIIIHGMCNASKVD 525
Query: 398 SSVAVFESL----TKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL 453
+ +F SL K N +++ L + LF M +EG PDE+T++ +
Sbjct: 526 DAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Query: 454 KALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPN 513
+A AT T+++L+ SG D + +++ S EL + LS+
Sbjct: 586 RAHLGDDDAT-TAAELIEEMK-SSGFPADVSTVKMVINMLS---SGELDKSFLDMLSTTR 640
Query: 514 A 514
A
Sbjct: 641 A 641
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 133/302 (44%), Gaps = 15/302 (4%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPP--EQ 124
R S V T + ID+F+K L A + M R +T+TYN LI +C E+
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 125 ALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVG 184
A+ + M G TF+ ++ ++ +G+++ + G ++N TLV
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 185 FYLNVGLREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEP 240
+ G EVA++LF E+ R ++ + +LL G C+ G +E++L + ++ +E
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 241 NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKS 300
+ + ++ N ++++ L C L + V+ + N ++ L A
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDL-FCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 301 FEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSR 356
F + E + +++N L+ + +D A EL M+ G V ++ ++N S
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625
Query: 357 AE 358
E
Sbjct: 626 GE 627
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 186/424 (43%), Gaps = 44/424 (10%)
Query: 75 DCVYTKNREIDAFIKSRDLNSALAVFHTMP---LR-DTVTYNLLISA---WCFPPEQALH 127
+ VY + I A+ +S A++VF++M LR + VTYN +I A +Q
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 128 LYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL 187
+ EM G++ TF+S+LAVC+R G + + +VF TL+
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 188 NVGLREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGV 243
G ++A E+ ++P + N+ ++ ++ GF + G +E+LN + M + G+ + V
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 244 TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
++ LL + + R E + + +G ++ ++ NAL+ Y G KK F
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVG-IKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 304 IPVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
+ E N++++++L+ + L +A+E+F + G V L+++ +
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 360 IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSV----------------AVF 403
+G + K G V S +ID +G+ + ++ S A+
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNS-IIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 623
Query: 404 ESLTKRTLECCNSLMTSLSHCGATQD----------VVELFGLMIDEGLMPDEVTFSTTL 453
E+ R ++ L T S+ T+D ++E+F M + P+ VTFS L
Sbjct: 624 ETEGNRVIQLFGQLTTE-SNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAIL 682
Query: 454 KALS 457
A S
Sbjct: 683 NACS 686
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 118/536 (22%), Positives = 220/536 (41%), Gaps = 94/536 (17%)
Query: 171 GFLSNVFVGGTLVGFYLNVGLREVARELFDELPER----NLAVWNVLLRGFCELGCVE-- 224
G+ + V+ L+ Y GL E A +F+ + E NL +N ++ C G +E
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFK 321
Query: 225 ESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANAL 284
+ ++ M +GV+P+ +TF LL VCS + L + +E ++F N L
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR-IEQDVFSYNTL 380
Query: 285 VDFYSACGCLVGAKKSFEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWG- 339
+D G + A + +PV+ NV+S+++++ A +AL LF M+ G
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 340 --QSPSVRSLVGLLNSCSRAEE-IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
S +L+ + R+EE + + +++ +K V +AL+ YGK
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK-----KDVVTYNALLGGYGKQGKY 495
Query: 397 ESSVAVFESLTKR----TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTT 452
+ VF + + L ++L+ S G ++ +E+F GL D V +S
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 453 LKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP 512
+ AL C K+G+ G A SL+D ++ G SP
Sbjct: 556 IDAL---------------C---KNGLVGSA---VSLIDEMTKEG------------ISP 582
Query: 513 NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKE-GRIL 571
N + + S+I+ + R+ + + G P + L ALT +++ G++
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADYSNG----GSLPFSSSALSALTETEGNRVIQLFGQLT 638
Query: 572 FDSM-KSVHGVQPDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSC-RS 629
+S ++ + + SC++++ + Q K + +S++L +C R
Sbjct: 639 TESNNRTTKDCEEGMQELSCILEVFRK----------MHQLEIKPNVVTFSAILNACSRC 688
Query: 630 HKNEEVGTRAAQVLVELDPDDPAV---------------WLQASNFYAEIGNFDAS 670
+ E+ A+ +L EL D V WLQA + + ++ D S
Sbjct: 689 NSFED----ASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMDGS 740
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 105/499 (21%), Positives = 191/499 (38%), Gaps = 87/499 (17%)
Query: 136 GIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVA 195
G T FS++++ RSG H E + V + ++G
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL----------------------- 299
Query: 196 RELFDELPERNLAVWNVLLRGFCELGCVE--ESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
NL +N ++ C G +E + ++ M +GV+P+ +TF LL VCS
Sbjct: 300 --------RPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS 350
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE----NV 309
+ L + +E ++F N L+D G + A + +PV+ NV
Sbjct: 351 RGGLWEAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNV 409
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQLWG---QSPSVRSLVGLLNSCSRAEE-IGLGKQ 365
+S+++++ A +AL LF M+ G S +L+ + R+EE + + ++
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE 469
Query: 366 IHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR----TLECCNSLMTSL 421
+ +K V +AL+ YGK + VF + + L ++L+
Sbjct: 470 MASVGIK-----KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 422 SHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEG 481
S G ++ +E+F GL D V +S + AL + S+ L K G+
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL--CKNGLVGSAVSLIDEMTKEGISP 582
Query: 482 DAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGM------------ 529
+ S++DA+ R ++ S S P + S + N +
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESN 642
Query: 530 ---------GKQGLA----VLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMK 576
G Q L+ V M + +KP+ +TF L C+ ++ +L + ++
Sbjct: 643 NRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Query: 577 --------SVHGVQPDQRH 587
VHG+ QR
Sbjct: 703 LFDNKVYGVVHGLLMGQRE 721
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 136/323 (42%), Gaps = 36/323 (11%)
Query: 69 TPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPP-- 122
T R V++ N +DA K ++ A + MP++ + V+Y+ +I +
Sbjct: 366 TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRF 425
Query: 123 EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL 182
++AL+L+GEM LGI +++++L++ + G E + + + G +V L
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 183 VGFYLNVGLREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGV 238
+G Y G + +++F E+ NL ++ L+ G+ + G +E++ + G+
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 239 EPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDF----------- 287
+ V + L+ + + L + K G + N+ N+++D
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSA 604
Query: 288 -YSACGCLVGAKKSFEAIPV---ENVISWNSLVSVNADNDLLCD----------ALELFT 333
YS G L + + A+ VI ++ ++N D LE+F
Sbjct: 605 DYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFR 664
Query: 334 VMQLWGQSPSVRSLVGLLNSCSR 356
M P+V + +LN+CSR
Sbjct: 665 KMHQLEIKPNVVTFSAILNACSR 687
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 485 VACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAM 540
+A +++ R G V ++ +IFET + F+++I+ Y R+G+ ++ ++V ++M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 541 VEKGLKPDEITFLCALTGCNHTGM-VKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
E GL+P+ +T+ + C GM K+ FD M+ +GVQPD+ F+ ++ + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSLLAVCSRGG 353
Query: 600 XXXXXXXXXXQTPDKR---DCFMWSSLLRS-CRSHKNEEVGTRAAQVLVELDPDDPAVWL 655
+ ++R D F +++LL + C+ + + AQ+ V+ + +
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 656 QASNFYAEIGNFD 668
+ +A+ G FD
Sbjct: 414 TVIDGFAKAGRFD 426
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 155/383 (40%), Gaps = 50/383 (13%)
Query: 255 HRRLNEGKKLQSCILKM-------------------GFVESNIFVANALVDFYSACGCLV 295
RR NE KL S ++ G + ++ +AL+ Y G
Sbjct: 226 ERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHE 285
Query: 296 GAKKSFEAIPV----ENVISWNSLVSVNADNDL-LCDALELFTVMQLWGQSPSVRSLVGL 350
A F ++ N++++N+++ + + F MQ G P + L
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSL 345
Query: 351 LNSCSRAEEIGLGKQIHCHALKLGFDEGS-------VHAQSALIDMYGKCSDIESSVAVF 403
L CSR GL A + FDE + V + + L+D K ++ + +
Sbjct: 346 LAVCSRG---GL-----WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 404 ESL-TKRTLE---CCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVS 459
+ KR + ++++ + G + + LFG M G+ D V+++T L ++
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL-SIYTK 456
Query: 460 ASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNAI 515
+ + +L A G++ D +L+ Y + G + ++F + PN +
Sbjct: 457 VGRSEEALDILREMA-SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLL 515
Query: 516 CFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSM 575
++++I+GY++ G+ K+ + + GL+ D + + + G+V L D M
Sbjct: 516 TYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Query: 576 KSVHGVQPDQRHFSCMVDLLCRA 598
+ G+ P+ ++ ++D R+
Sbjct: 576 -TKEGISPNVVTYNSIIDAFGRS 597
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 118/541 (21%), Positives = 214/541 (39%), Gaps = 82/541 (15%)
Query: 91 RDLNSALAVFHTMPLRDTV-----TYN--LLISAWCFPPEQALHLYGEMGLLGIRETSTT 143
+D+N A+ F R + +YN LL+ A C + + GEM + G + T
Sbjct: 76 KDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNT 135
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP 203
++ C ++ REG V + KF F TL+G + V ++ LF ++
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195
Query: 204 ----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLN 259
E + ++ L+RGF + G V+ +L+ M
Sbjct: 196 ELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM-------------------------- 229
Query: 260 EGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV----ISWNSL 315
K ++++I + N +D + G + A K F I + +++ S+
Sbjct: 230 ----------KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 316 VSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL---- 371
+ V + L +A+E+F ++ + P + ++ A GK ++L
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSA-----GKFDEAYSLLERQ 334
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR---TLECCNSLMTSLSHCGATQ 428
+ SV A + ++ K ++ ++ VFE + K L N L+ L G
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLD 394
Query: 429 DVVELFGLMIDEGLMPDEVTFSTTLKALSVS-----ASATFTSSQLLHCFALKSGVEGDA 483
EL M GL P+ T + + L S A A F C D
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP-------DE 447
Query: 484 AVACSLMDAYSRCGHVELSLQIFETLSSP----NAICFTSMINGYARNGMGKQGLAVLHA 539
CSL+D + G V+ + +++E + N+I +TS+I + +G + G +
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKD 507
Query: 540 MVEKGLKPDEITFLCALTGCN-HTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRA 598
M+ + PD + L C G ++GR +F+ +K+ V PD R +S ++ L +A
Sbjct: 508 MINQNCSPD-LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV-PDARSYSILIHGLIKA 565
Query: 599 G 599
G
Sbjct: 566 G 566
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 100/544 (18%), Positives = 210/544 (38%), Gaps = 67/544 (12%)
Query: 76 CVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTV----TYNLLISAWCFPP----EQALH 127
C Y N I + + + A ++ + ++ YN +++ C ++AL
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT--CLRKMGKVDEALK 364
Query: 128 LYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL 187
++ EM ST ++ ++ + R+G ++ + K G NV +V
Sbjct: 365 VFEEMKKDAAPNLST-YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 188 NVGLREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGV 243
+ A +F+E+ + + + L+ G ++G V+++ Y +M N +
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 244 TFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEA 303
+ L+K NH R +G K+ ++ ++ + N +D G + FE
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQN-CSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542
Query: 304 IP----VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
I V + S++ L+ + ELF M+ G R+ +++ + +
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 360 IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCN 415
+ Q+ GF E +V ++ID K ++ + +FE + +E +
Sbjct: 603 VNKAYQLLEEMKTKGF-EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661
Query: 416 SLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFAL 475
SL+ G + + ++ +GL P+ T++
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN------------------------- 696
Query: 476 KSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGK 531
SL+DA + + +L F+++ +PN + + +ING +
Sbjct: 697 ------------SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 532 QGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCM 591
+ M ++G+KP I++ ++G G + E LFD K+ GV PD ++ M
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV-PDSACYNAM 803
Query: 592 VDLL 595
++ L
Sbjct: 804 IEGL 807
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 118/574 (20%), Positives = 229/574 (39%), Gaps = 95/574 (16%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFP--PEQALHLYG 130
V+ N ID K + +N A +F M R +TYN LI +C PE++ +
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
M I + TF+++L ++G + V + GF+ + F
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT------------ 321
Query: 191 LREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLK 250
+++L G+ E +L Y GV+ N T LL
Sbjct: 322 -------------------FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 251 VCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENV- 309
++ + +++ + G V + + + N ++D Y G LVGA+ EA+ + +
Sbjct: 363 ALCKEGKIEKAEEILGREMAKGLVPNEV-IYNTMIDGYCRKGDLVGARMKIEAMEKQGMK 421
Query: 310 ---ISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE------- 359
+++N L+ + + +A + M+L G SPSV + L+ R E
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDI 481
Query: 360 -------------IGLGKQIHC----------HALKLGFDEGSVHAQSALIDMY--GKCS 394
+ G I+C +K ++ V + + +M G CS
Sbjct: 482 LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCS 541
Query: 395 D--IESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVT 448
IE + + + K+ +E N+L+ LS G + +L + +GL PD T
Sbjct: 542 KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFT 601
Query: 449 FSTTLKALSVSASATFTSSQLLHCFAL-----KSGVEGDAAVACSLMDAYSRCGHVELSL 503
+++ + + + C AL +SG++ L+ ++ G +EL+
Sbjct: 602 YNSLISGYGFAGNVQ-------RCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTE 653
Query: 504 QIFETLS-SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHT 562
++F +S P+ + + +++ YA +G ++ + M+EK + D+ T+ + G
Sbjct: 654 RLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 563 GMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLC 596
G + E R L D M + ++P+ ++ +V C
Sbjct: 714 GKLCEVRSLIDEM-NAREMEPEADTYNIIVKGHC 746
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 197/459 (42%), Gaps = 40/459 (8%)
Query: 164 HCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER----NLAVWNVLLRGFCE 219
H R+ F+ NV + G G +N A +LFDE+ R +L +N L+ G+C+
Sbjct: 207 HDRIYPSVFIYNVLIDGLCKGKRMND-----AEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
G E+S RM D +EP+ +TF LLK + + + + + +GFV + F
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV-PDAF 320
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVENVISWNSL---VSVNADNDLLCDALELFTVMQ 336
+ L D YS+ A +E V++ + N+ + +NA LC ++ +
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYET-AVDSGVKMNAYTCSILLNA----LCKEGKIEKAEE 375
Query: 337 LWGQSPSVRSLVG---LLNS-----CSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALID 388
+ G+ + + LV + N+ C + + +G +I K G + A + LI
Sbjct: 376 ILGREMA-KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME-KQGMKPDHL-AYNCLIR 432
Query: 389 MYGKCSDIESSVAVFESLTKR----TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMP 444
+ + ++E++ + + ++E N L+ ++ M D G MP
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 445 DEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE---- 500
+ V++ T + L + +Q++ GV + L+D G +E
Sbjct: 493 NVVSYGTLINCL--CKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 501 LSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCN 560
S ++ + N + + ++I+G + G + +L + KGLKPD T+ ++G
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 561 HTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
G V+ L++ MK G++P + + ++ L + G
Sbjct: 611 FAGNVQRCIALYEEMKR-SGIKPTLKTYHLLISLCTKEG 648
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 109/287 (37%), Gaps = 61/287 (21%)
Query: 328 ALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDE-------GSV 380
LELF M+ PSV L++ + + + +Q+ FDE S+
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL--------FDEMLARRLLPSL 249
Query: 381 HAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVELFGL 436
+ LID Y K + E S V E + +E N+L+ L G +D +
Sbjct: 250 ITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKE 309
Query: 437 MIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRC 496
M D G +PD TFS L D YS
Sbjct: 310 MKDLGFVPDAFTFSI-------------------------------------LFDGYSSN 332
Query: 497 GHVELSLQIFETLSSP----NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
E +L ++ET NA + ++N + G ++ +L + KGL P+E+ +
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 553 LCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+ G G + R+ ++M+ G++PD ++C++ C G
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEK-QGMKPDHLAYNCLIRRFCELG 438
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 15/231 (6%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWC--FPPEQAL 126
P++ +Y N ID + + DL A M + D + YN LI +C E A
Sbjct: 387 PNEVIY--NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 127 HLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV--- 183
+M L G+ + T++ ++ R + + + G + NV GTL+
Sbjct: 445 KEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCL 504
Query: 184 --GFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPN 241
G L + + V R++ D + ++N+L+ G C G +E++ + M G+E N
Sbjct: 505 CKGSKL-LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563
Query: 242 GVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACG 292
VT+ L+ S +L+E + L I + G ++ ++F N+L+ Y G
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKG-LKPDVFTYNSLISGYGFAG 613
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 156/345 (45%), Gaps = 19/345 (5%)
Query: 268 ILKMGFVESNIFVANALVDF-----YSACGCLVGAKKSFEAIPVENVISWNSLVSVNADN 322
++K+GF S + + + L F + LV + F +P NV+ +N++++ N
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP--NVVIYNTVINGLCKN 197
Query: 323 DLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHA 382
L +ALE+F M+ G + L++ S + ++ +K D +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 383 QSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVELFGLMI 438
+ALID + K ++ + +++ + +R++ NSL+ G D +F LM+
Sbjct: 258 -TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 439 DEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGH 498
+G PD VT++T + S L C G+ GDA +L+ Y + G
Sbjct: 317 SKGCFPDVVTYNTLITGFC--KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 499 VELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
+ ++ ++F + SP+ + + +++ NG ++ L ++ + + + D IT+
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 555 ALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+ G T +KE LF S+ + GV+PD + M+ LCR G
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSL-TRKGVKPDAIAYITMISGLCRKG 478
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 102/491 (20%), Positives = 193/491 (39%), Gaps = 80/491 (16%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMP----LRDTVTYNLLISAWC--FPPEQAL 126
P + R + K + + ++H M D ++ +LI +C AL
Sbjct: 75 PIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLAL 134
Query: 127 HLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFY 186
L G+M LG R + T S+L + +E V + + FGF+ NV
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNV---------- 184
Query: 187 LNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFC 246
++N ++ G C+ + +L + M G+ + VT+
Sbjct: 185 ---------------------VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 223
Query: 247 YLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI-- 304
L+ SN R + +L ++K ++ N+ AL+D + G L+ A+ ++ +
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 282
Query: 305 --PVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
V NV ++NSL++ + L DA +F +M G P V + L+ +++ +
Sbjct: 283 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 342
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLS 422
G ++ C G G + LI +G C + +VA
Sbjct: 343 GMKLFCEMTYQGL-VGDAFTYNTLI--HGYCQAGKLNVA--------------------- 378
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGD 482
++F M+D G+ PD VT++ L L + + ++ KS ++ D
Sbjct: 379 --------QKVFNRMVDCGVSPDIVTYNILLDCL--CNNGKIEKALVMVEDLQKSEMDVD 428
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLH 538
++ R ++ + +F +L+ P+AI + +MI+G R G+ ++ +
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488
Query: 539 AMVEKGLKPDE 549
M E G P E
Sbjct: 489 RMKEDGFMPSE 499
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 146/307 (47%), Gaps = 12/307 (3%)
Query: 301 FEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
++ P+ +++ + +++V A + + L+ M+ G S + S L++ R +
Sbjct: 71 LQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRL 130
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTK----RTLECCNS 416
L + +KLGF S+ +L++ + + + + +V++ +S+ + N+
Sbjct: 131 SLALALLGKMMKLGF-RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNT 189
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
++ L + +E+F M +G+ D VT++T + LS S T +++LL +K
Sbjct: 190 VINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT-DAARLLRDM-VK 247
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQ 532
++ + +L+D + + G++ + +++ + PN + S+ING+ +G
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 533 GLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMV 592
+ MV KG PD +T+ +TG + V++G LF M + G+ D ++ ++
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-TYQGLVGDAFTYNTLI 366
Query: 593 DLLCRAG 599
C+AG
Sbjct: 367 HGYCQAG 373
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 10/224 (4%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPP--EQALHLYG 130
V+T N I+ F L A +F M + D VTYN LI+ +C E + L+
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
EM G+ + T+++++ ++G +V R+V G ++ L+ N G
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNG 408
Query: 191 LREVARELFDELPERNLAV----WNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFC 246
E A + ++L + + V +N++++G C ++E+ + + GV+P+ + +
Sbjct: 409 KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 468
Query: 247 YLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSA 290
++ E KL + + GF+ S L D Y++
Sbjct: 469 TMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 512
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/497 (20%), Positives = 218/497 (43%), Gaps = 62/497 (12%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTM------PLRDTVTYNLLISAWCFPPE--QALHL 128
+YT + I+ F + L+ ALAV M P D VT + L++ +C A+ L
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLSSLLNGYCHSKRISDAVAL 175
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+M +G + + TF++++ E V + ++V+ G ++ GT+V
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 189 VGLREVARELFDELP----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
G ++A L +++ + N+ ++N ++ C+ VE +++ ++ M G+ PN VT
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
+ L+ N+ R ++ +L S +L+ + N+ NAL+D + G LV A+K E +
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKK-INPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 305 PVENV----ISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEI 360
++ I++N L++ ++ L +A ++F M P++++
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY------------- 401
Query: 361 GLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTL----ECCNS 416
+ LI+ + KC +E V +F +++R L +
Sbjct: 402 -----------------------NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
++ G +F M+ + D +T+S L L + ++ ++ + K
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL--CSYGKLDTALVIFKYLQK 496
Query: 477 SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-SPNAICFTSMINGYARNGMGKQGLA 535
S +E + + ++++ + G V + +F +LS P+ + + +MI+G + ++
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 536 VLHAMVEKGLKPDEITF 552
+ M E G P+ T+
Sbjct: 557 LFRKMKEDGTLPNSGTY 573
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/502 (19%), Positives = 216/502 (43%), Gaps = 57/502 (11%)
Query: 107 DTVTYNLLISAWCFPPEQ--ALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVH 164
D TY++ I+ +C + AL + +M LG T SS+L S + V +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 165 CRVVKFGFLSNVFVGGTLV-GFYLNVGLREVARELFDELPER----NLAVWNVLLRGFCE 219
++V+ G+ + F TL+ G +L+ E A L D++ +R +L + ++ G C+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASE-AVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 220 LGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
G ++ +LN ++M ++ N V F ++ +R +
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE-------------------- 275
Query: 280 VANALVDFYSACGCLVGAKKSFEAIPVE-NVISWNSLVSVNADNDLLCDALELFTVMQLW 338
VD ++ E + NV+++NSL++ + DA L + M
Sbjct: 276 ---VAVDLFT----------EMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 339 GQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIES 398
+P+V + L+++ + ++ +++H ++ D ++ + LI+ + + ++
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI-TYNLLINGFCMHNRLDE 381
Query: 399 SVAVFESLTKR----TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
+ +F+ + + ++ N+L+ C +D VELF M GL+ + VT++T ++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 455 ALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSP-- 512
+ S+Q++ + + V D L+ G ++ +L IF+ L
Sbjct: 442 GFFQAGDCD--SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 513 --NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRI 570
N + +MI G + G + + ++ +KPD +T+ ++G +++E
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 571 LFDSMKSVHGVQPDQRHFSCMV 592
LF MK G P+ ++ ++
Sbjct: 557 LFRKMKE-DGTLPNSGTYNTLI 577
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 127/300 (42%), Gaps = 12/300 (4%)
Query: 305 PVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGK 364
P +++ +N L+S A + + L MQ G S + + +N R ++ L
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 365 QIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHC 424
+ +KLG+ E + S+L++ Y I +VA+ + + + + T+L H
Sbjct: 139 AVLAKMMKLGY-EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 425 ----GATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
+ V L M+ G PD VT+ T + L + L A + ++
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR--IK 255
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAV 536
+ + +++D+ + HVE+++ +F + + PN + + S+IN G +
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 537 LHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLC 596
L M+EK + P+ +TF + G + E L + M + PD ++ +++ C
Sbjct: 316 LSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ-RSIDPDTITYNLLINGFC 374
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/402 (19%), Positives = 167/402 (41%), Gaps = 44/402 (10%)
Query: 206 NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQ 265
+L +++ + FC + +L ++M G EP+ VT LL + +R+++ L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 266 SCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLL 325
+++MG+ + + F L+ G + K S
Sbjct: 177 DQMVEMGY-KPDTFTFTTLIH-----GLFLHNKAS------------------------- 205
Query: 326 CDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSA 385
+A+ L M G P + + ++N + +I L + + ++ + +V +
Sbjct: 206 -EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL-LNKMEAARIKANVVIFNT 263
Query: 386 LIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVELFGLMIDEG 441
+ID K +E +V +F + + + NSL+ L + G D L M+++
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 442 LMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVEL 501
+ P+ VTF+ + A ++ LH ++ ++ D L++ + ++
Sbjct: 324 INPNVVTFNALIDAFF--KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 502 SLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALT 557
+ Q+F+ + S PN + ++ING+ + + G+ + M ++GL + +T+ +
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 558 GCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
G G +++F M S + V D +S ++ LC G
Sbjct: 442 GFFQAGDCDSAQMVFKQMVS-NRVPTDIMTYSILLHGLCSYG 482
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 13/190 (6%)
Query: 417 LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK 476
L LS D V+LFG M+ P V F+ L SA A +L+ +
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLL-----SAVAKMNKFELVISLGEQ 108
Query: 477 S---GVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGM 529
G+ D ++ + R + L+L + + P+ + +S++NGY +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 530 GKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFS 589
+A++ MVE G KPD TF + G E L D M G QPD +
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVTYG 227
Query: 590 CMVDLLCRAG 599
+V+ LC+ G
Sbjct: 228 TVVNGLCKRG 237
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 195/445 (43%), Gaps = 25/445 (5%)
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGF-LSNVFVGGTLVGFYLNVGLREVAR 196
+ TS+T++SV+ + + G H + +V+ + G + L+ Y +G + A
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 197 ELFDELPERNL----AVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVC 252
LFDE+ + + ++ LL + ++G VE++L+ + M G P T+ L+K
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 253 SNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV----EN 308
R++E +L+ G +F+ N L++ G + F + +
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNN-LMNILGKVGRVEELTNVFSEMGMWRCTPT 372
Query: 309 VISWNSLVSVNADNDL-LCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
V+S+N+++ ++ + + F M+ SPS + L++ + + +
Sbjct: 373 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 368 CHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR----TLECCNSLMTSLSH 423
+ GF A +LI+ GK E++ +F+ L + + ++
Sbjct: 433 EEMDEKGFPPCPA-AYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGK 491
Query: 424 CGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDA 483
CG + V+LF M ++G PD ++ + + V A ++ LL ++G D
Sbjct: 492 CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM-VKAGMINEANSLLRKME-ENGCRADI 549
Query: 484 AVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHA 539
+++ ++R G ++++FET+ P+ + + +++ +A GM ++ ++
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Query: 540 MVEKGLKPDEITF---LCALTGCNH 561
M +KG + D IT+ L A+ +H
Sbjct: 610 MKDKGFEYDAITYSSILDAVGNVDH 634
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 135/333 (40%), Gaps = 21/333 (6%)
Query: 282 NALVDFYSACGCLVGAKKSFEAI------PVENVISWNSLVSVNADNDLLCDALELFTVM 335
+AL+ Y G A + F+ + P E + + +L+ + + AL+LF M
Sbjct: 237 SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI--YTTLLGIYFKVGKVEKALDLFEEM 294
Query: 336 QLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSD 395
+ G SP+V + L+ +A + + L+ G V + L+++ GK
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNN-LMNILGKVGR 353
Query: 396 IESSVAVFESLT----KRTLECCNSLMTSLSHCGA-TQDVVELFGLMIDEGLMPDEVTFS 450
+E VF + T+ N+++ +L A +V F M + + P E T+S
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 451 TTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIF---- 506
+ + + LL + G A CSL++A + E + ++F
Sbjct: 414 ILIDGYC--KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 507 ETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVK 566
E + ++ + MI + + G + + + + M +G PD + ++G GM+
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 567 EGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
E L M+ +G + D + +++ R G
Sbjct: 532 EANSLLRKMEE-NGCRADINSHNIILNGFARTG 563
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/494 (18%), Positives = 206/494 (41%), Gaps = 33/494 (6%)
Query: 123 EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL 182
E A +Y E+ G+ T + ++ + G + +V + G ++ TL
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 183 VGFYLNVGLREVARELFDELPERNLA----VWNVLLRGFCELGCVEESLNYYSRMCFDGV 238
+ Y + GL E A EL + +P + + +N ++ G C+ G E + ++ M G+
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
Query: 239 EPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAK 298
P+ T+ LL + E +K+ S + V ++ ++++ ++ G L A
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVV-PDLVCFSSMMSLFTRSGNLDKAL 395
Query: 299 KSFEAIPVENVISWNSLVSVNAD----NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSC 354
F ++ +I N + ++ ++ A+ L M G + V + +L+
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 355 SRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE-- 412
+ + +G ++ + S + + LID + K ++++++ +F+ + ++ +
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDS-YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 413 --CCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLL 470
N+L+ G E++ M+ + ++P +++S + AL + L
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC-------SKGHLA 567
Query: 471 HCF-----ALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMI 521
F + ++ + S++ Y R G+ E + S P+ I + ++I
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 522 NGYARNGMGKQGLAVLHAMVEK--GLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVH 579
G+ R + ++ M E+ GL PD T+ L G +KE ++ M
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE-R 686
Query: 580 GVQPDQRHFSCMVD 593
GV PD+ ++CM++
Sbjct: 687 GVNPDRSTYTCMIN 700
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/524 (19%), Positives = 200/524 (38%), Gaps = 79/524 (15%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRD----TVTYNLLISAWCF--PPEQALHLYG 130
+ T N I A+ + A + + MP + TYN +I+ C E+A ++
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
EM G+ STT+ S+L + G E +V + + ++ +++ + G
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 191 LREVARELFDELPERNL----AVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFC 246
+ A F+ + E L ++ +L++G+C G + ++N + M G + VT+
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 247 YLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV 306
+L + L E KL + + + + + L+D + G L A + F+ +
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDS-YTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 307 E----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
+ +V+++N+L+ D ++ T ++W S
Sbjct: 509 KRIRLDVVTYNTLL------DGFGKVGDIDTAKEIWADMVS------------------- 543
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLS 422
K+I + ++ ++ L + + ++ S K T+ CNS++
Sbjct: 544 -KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN------IKPTVMICNSMIKGYC 596
Query: 423 HCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGD 482
G D MI EG +PD ++++T + + F L +E +
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGF-------VREENMSKAFGLVKKMEEE 649
Query: 483 AAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVE 542
G V P+ + S+++G+ R K+ VL M+E
Sbjct: 650 QG------------GLV------------PDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 543 KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQR 586
+G+ PD T+ C + G + E + D M G PD +
Sbjct: 686 RGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ-RGFSPDDK 728
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/492 (19%), Positives = 188/492 (38%), Gaps = 67/492 (13%)
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG------- 190
+ TS + S+++ + RSG + R+++ +S + + +L + N G
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFD 169
Query: 191 -----------LREVARELFDELPERNLAVW----NVLLRGFCELGCVEESLNYYSRMCF 235
LRE A E F L + V N L+ +G VE + Y +
Sbjct: 170 LLIRTYVQARKLRE-AHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISR 228
Query: 236 DGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLV 295
GV N T ++ ++ + S + + G V +I N L+ YS+ G
Sbjct: 229 SGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG-VYPDIVTYNTLISAYSSKG--- 284
Query: 296 GAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCS 355
L+ +A EL M G SP V + ++N
Sbjct: 285 ----------------------------LMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 356 RAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR----TL 411
+ + K++ L+ G S +S L++ K D+ + VF + R L
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK-GDVVETEKVFSDMRSRDVVPDL 375
Query: 412 ECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLH 471
C +S+M+ + G + F + + GL+PD V ++ ++ + + L
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY--CRKGMISVAMNLR 433
Query: 472 CFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARN 527
L+ G D +++ + + + ++F ++ P++ T +I+G+ +
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 528 GMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRH 587
G + + + M EK ++ D +T+ L G G + + ++ M S + P
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE-ILPTPIS 552
Query: 588 FSCMVDLLCRAG 599
+S +V+ LC G
Sbjct: 553 YSILVNALCSKG 564
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 12/215 (5%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLRDT----VTYNLLISAWCFPPE--QALHLYG 130
V T N +D F K D+++A ++ M ++ ++Y++L++A C +A ++
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
EM I+ T +S++ RSG +G +++ GF+ + TL+ ++
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 191 LREVARELFDELPER------NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
A L ++ E ++ +N +L GFC ++E+ +M GV P+ T
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIF 279
+ ++ + L E ++ +L+ GF + F
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 207/456 (45%), Gaps = 39/456 (8%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTM------PLRDTVTYNLLISAWCFPPE--QALHL 128
+YT + I+ F + L+ ALA+ M P VT N L++ +C +A+ L
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGP--SIVTLNSLLNGFCHGNRISEAVAL 167
Query: 129 YGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLN 188
+M +G + + TF++++ + E V + R+V G ++ G ++
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 189 VGLREVARELFDELP----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVT 244
G ++A L +++ E ++ ++N ++ G C+ ++++ + +++M G++P+ T
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 245 FCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI 304
+ L+ N+ R ++ +L S +L+ + ++ NAL+D + G LV A+K ++ +
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKN-INPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 305 P-----VENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEE 359
+V+++N+L+ + + +E+F M G + + L++ +A +
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 360 IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCN 415
+ + + G + + L+D ++E+++ VFE + KR ++
Sbjct: 407 CDNAQMVFKQMVSDGV-HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 416 SLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL-----KALSVSASATFT----- 465
+++ +L G +D +LF + +G+ P+ VT++T + K L A A F
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 466 ----SSQLLHCFALKSGVEGDAAVACSLMDAYSRCG 497
+S + +GD A + L+ CG
Sbjct: 526 GPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/494 (19%), Positives = 207/494 (41%), Gaps = 22/494 (4%)
Query: 123 EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTL 182
+ A+ L+G+M + FS +L+ A+ + + ++ G N++
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 183 VGFYLNVGLREVARELFDELPE----RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGV 238
+ ++ +A + ++ + ++ N LL GFC + E++ +M G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 239 EPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACG---CLV 295
+P+ VTF L+ H + +E L ++ G + ++ A+++ G +
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 296 GAKKSFEAIPVE-NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSC 354
E +E +V+ +N+++ + DA +LF M+ G P V + L++
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 355 SRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRT---- 410
++ L+ + V +ALID + K + + +++ + K
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFF-NALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 411 -LECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQL 469
+ N+L+ ++ +E+F M GL+ + VT++T + + ++Q+
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD--NAQM 412
Query: 470 LHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNA----ICFTSMINGYA 525
+ + GV D L+D G+VE +L +FE + + + +T+MI
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 526 RNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQ 585
+ G + G + ++ KG+KP+ +T+ ++G G+ +E LF MK G P+
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE-DGPLPNS 531
Query: 586 RHFSCMVDLLCRAG 599
++ ++ R G
Sbjct: 532 GTYNTLIRARLRDG 545
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/510 (20%), Positives = 213/510 (41%), Gaps = 64/510 (12%)
Query: 110 TYNLLISAWCFPPEQ--ALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRV 167
T N++I+ +C + A + G++ LG +TTF++++ G E V + R+
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 168 VKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLA----VWNVLLRGFCELGCV 223
V+ G +V ++V G +A +L ++ ERN+ ++ ++ C GC+
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 224 EESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANA 283
+ +++ + M G++ + VT+ L++ + N+G L ++ V N+ N
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV-PNVITFNV 303
Query: 284 LVDFYSACGCLVGAKKSFEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
L+D + G L A + ++ + N+I++N+L+ + L +A + +M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
SP + + ++LI Y ++
Sbjct: 364 CSPDIVTF------------------------------------TSLIKGYCMVKRVDDG 387
Query: 400 VAVFESLTKRTLECCNSLMTSL-----SHCGATQDVVELFGLMIDEGLMPDEVTFSTTLK 454
+ VF +++KR L N++ S+ G + ELF M+ G++PD +T+ L
Sbjct: 388 MKVFRNISKRGL-VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 455 ALSVSASATFTSSQLLHCFA--LKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS-- 510
L + + L F KS ++ + ++++ + G VE + +F +L
Sbjct: 447 GLCDNGKL----EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 511 --SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
PN + +T MI+G + G + +L M E G P++ T+ + G +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562
Query: 569 RILFDSMKSVHGVQPDQRHFSCMVDLLCRA 598
L + MKS G D ++D+L A
Sbjct: 563 AKLIEEMKSC-GFSADASSIKMVIDMLLSA 591
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPP--EQALHLYG 130
V T N ++ +S D + AL + M R D TY+ +I + C + A+ L+
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
EM GI+ + T++S++ ++G +G + +V + NV L+ ++ G
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 191 LREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFC 246
+ A EL+ E+ R N+ +N L+ G+C + E+ N M + P+ VTF
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372
Query: 247 YLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAI-- 304
L+K +R+++G K+ I K G V +N + LV + G + A++ F+ +
Sbjct: 373 SLIKGYCMVKRVDDGMKVFRNISKRGLV-ANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 305 --PVENVISWNSLVSVNADNDLLCDALELFTVMQ 336
+ +V+++ L+ DN L ALE+F +Q
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 146/345 (42%), Gaps = 20/345 (5%)
Query: 269 LKMGFVESNIFVANALVDFYSAC--GC----LVGAKKSFEAIPVENVISWNSLVSVNADN 322
L++ + NI+ N +++ + C C ++G P + ++N+L+
Sbjct: 114 LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP--DTTTFNTLIKGLFLE 171
Query: 323 DLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHA 382
+ +A+ L M G P V + ++N R+ + L + ++ + V
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL-LRKMEERNVKADVFT 230
Query: 383 QSALIDMYGKCSDIESSVAVFESLTKRTLECC----NSLMTSLSHCGATQDVVELFGLMI 438
S +ID + I++++++F+ + + ++ NSL+ L G D L M+
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 439 DEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGH 498
++P+ +TF+ L + L+ + G+ + +LMD Y
Sbjct: 291 SREIVPNVITFNVLLDVFV--KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 499 VELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLC 554
+ + + + + SP+ + FTS+I GY G+ V + ++GL + +T+
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 555 ALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+ G +G +K LF M S HGV PD + ++D LC G
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVS-HGVLPDVMTYGILLDGLCDNG 452
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 10/189 (5%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPP--EQ 124
R S + T N +D + L+ A + M D VT+ LI +C +
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 125 ALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVG 184
+ ++ + G+ + T+S ++ +SG + ++ +V G L +V G L+
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 185 FYLNVGLREVARELFDELPERNL----AVWNVLLRGFCELGCVEESLNYYSRMCFDGVEP 240
+ G E A E+F++L + + ++ ++ G C+ G VE++ N + + GV+P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 241 NGVTFCYLL 249
N +T+ ++
Sbjct: 507 NVMTYTVMI 515
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/475 (21%), Positives = 199/475 (41%), Gaps = 62/475 (13%)
Query: 144 FSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV-GFYLNVGLREVARELFDEL 202
+ +++ ++G+ +++K GF+ + +G +L+ GF + LR+ A ++FD +
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD-ALKVFDVM 256
Query: 203 PER-----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
+ N +++L+ G CE+G +EE+ +M G +P+ T+ L+K +
Sbjct: 257 SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGA----KKSFEAIPVENVISWN 313
+++ L ++ G + N+ L+D G + A +K + +VI++N
Sbjct: 317 IDKAFNLFDEMIPRG-CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYN 375
Query: 314 SLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHC-HALK 372
+L++ + + A EL TVM+ P+VR+ L+ R +GK H LK
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR-----VGKPYKAVHLLK 430
Query: 373 LGFDEG---SVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCG 425
D G + + + LID + + ++ + S+ +E +++ + G
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490
Query: 426 ATQDVVELFGLMIDEGLMPDEVTFSTTLKAL---SVSASATFTSSQLLHCFAL------- 475
GLM+ +G+ DEVT +T + + + A F L+ L
Sbjct: 491 KADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLN 550
Query: 476 -----------------------KSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS- 511
K G+ +L+D R G + S +I E +
Sbjct: 551 VILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610
Query: 512 ---PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG 563
PN +T +ING + G ++ +L AM + G+ P+ +T+ + G + G
Sbjct: 611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 111/503 (22%), Positives = 207/503 (41%), Gaps = 76/503 (15%)
Query: 86 AFIKSRDLNSALAVFHTMPLR-----DTVTYNLLISAWCFPP--EQALHLYGEMGLLGIR 138
F + +L AL VF M ++V+Y++LI C E+A L +MG G +
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 139 ETSTTFSSVL-AVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
++ T++ ++ A+C R GL + A
Sbjct: 299 PSTRTYTVLIKALCDR------------------------------------GLIDKAFN 322
Query: 198 LFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
LFDE+ R N+ + VL+ G C G +EE+ +M D + P+ +T+ L+
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV------- 306
R+ +L + + K + N+ N L++ C VG K ++A+ +
Sbjct: 383 KDGRVVPAFELLTVMEKRA-CKPNVRTFNELMEGL----CRVG--KPYKAVHLLKRMLDN 435
Query: 307 ---ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLG 363
+++S+N L+ + A +L + M + P + ++N+ + + +
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 364 KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTK----RTLECCNSLMT 419
L+ G V + LID K ++ + E+L K T N ++
Sbjct: 496 SAFLGLMLRKGISLDEVTG-TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 420 SLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGV 479
LS ++ + + G + GL+P VT++T + L S T S ++L L SG
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT-GSFRILELMKL-SGC 612
Query: 480 EGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLA 535
+ +++ + G VE + ++ + SPN + +T M+ GY NG + L
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 536 VLHAMVEKGLKPDEITFLCALTG 558
+ AMVE+G + ++ + L G
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQG 695
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 164/405 (40%), Gaps = 42/405 (10%)
Query: 199 FDELPE-----RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
FDEL E N ++ LL +L + Y RM DG + + ++
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE-----N 308
+ + S ILK+GFV + + L+ F L A K F+ + E N
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN-LRDALKVFDVMSKEVTCAPN 265
Query: 309 VISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNS-CSRAEEIGLGKQIH 367
+S++ L+ + L +A L M G PS R+ L+ + C R GL +
Sbjct: 266 SVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR----GLIDK-- 319
Query: 368 CHALKLGFDE-------GSVHAQSALIDMYGKCSD--IESSVAVFESLTKR----TLECC 414
A L FDE +VH + LID G C D IE + V + K ++
Sbjct: 320 --AFNL-FDEMIPRGCKPNVHTYTVLID--GLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 415 NSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFA 474
N+L+ G EL +M P+ TF+ ++ L + + LL
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC-RVGKPYKAVHLLK-RM 432
Query: 475 LKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMG 530
L +G+ D L+D R GH+ + ++ +++ P+ + FT++IN + + G
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 531 KQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSM 575
A L M+ KG+ DE+T + G G ++ + +++
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 20/266 (7%)
Query: 345 RSLVGLL--NSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAV 402
R++V L N + A E+ + K LK+GF S H ++L+ + + ++ ++ V
Sbjct: 199 RTIVNALCKNGYTEAAEMFMSK-----ILKIGFVLDS-HIGTSLLLGFCRGLNLRDALKV 252
Query: 403 FESLTKRTLECCNS-----LMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALS 457
F+ ++K NS L+ L G ++ L M ++G P T++ +KAL
Sbjct: 253 FDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC 312
Query: 458 VSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PN 513
+ L + G + + L+D R G +E + + + P+
Sbjct: 313 --DRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370
Query: 514 AICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFD 573
I + ++INGY ++G +L M ++ KP+ TF + G G + L
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Query: 574 SMKSVHGVQPDQRHFSCMVDLLCRAG 599
M +G+ PD ++ ++D LCR G
Sbjct: 431 RMLD-NGLSPDIVSYNVLIDGLCREG 455
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 168/403 (41%), Gaps = 46/403 (11%)
Query: 206 NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQ 265
NL N+LL FC + +L++ +M G EP+ VTF LL R+ + +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 266 SCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLL 325
++ MG+ + N+ + N ++D G KS + DN
Sbjct: 175 DQMVGMGY-KPNVVIYNTIID---------GLCKSKQV-----------------DN--- 204
Query: 326 CDALELFTVMQLWGQSPSVRSLVGLLNS-CSRAEEIGLGKQIHCHALKLGFDEGSVHAQS 384
AL+L M+ G P V + L++ CS + + C + + + V +
Sbjct: 205 --ALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD--VFTFN 260
Query: 385 ALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVELFGLMIDE 440
ALID K + + +E + +R+L+ + L+ L + E+FG M+ +
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Query: 441 GLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVE 500
G PD VT+S + S L C + GV + L+ Y R G +
Sbjct: 321 GCFPDVVTYSILINGYC--KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 501 LSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCAL 556
++ +IF + PN I + +++G NG ++ L +L M + G+ D +T+ +
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 557 TGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
G G V + ++ S+ + G+ PD ++ M+ L + G
Sbjct: 439 RGMCKAGEVADAWDIYCSL-NCQGLMPDIWTYTTMMLGLYKKG 480
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/480 (20%), Positives = 211/480 (43%), Gaps = 53/480 (11%)
Query: 88 IKSRDLNSALAVFHTM----PLRDTVTYNLLISAWCFPPEQ--ALHLYGEMGLLGIRETS 141
I+ L+ +L +F M PL ++ L+SA + ++L+ +M +LGI
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116
Query: 142 TTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDE 201
T + +L R + +++K G ++ G+L+ + A +FD+
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 202 LP----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRR 257
+ + N+ ++N ++ G C+ V+ +L+ +RM DG+ P+ VT+ L+ + R
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 258 LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE----NVISWN 313
++ ++ SC+ K + ++F NAL+D G + A++ +E + ++++++
Sbjct: 237 WSDATRMVSCMTKRE-IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 314 SLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKL 373
L+ L +A E+F M G P V + L+N +++++ G ++ C +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 374 GFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVEL 433
G +V + I + G C + +VA E + +R + C
Sbjct: 356 GVVRNTV---TYTILIQGYCRAGKLNVA--EEIFRRMVFC-------------------- 390
Query: 434 FGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAY 493
G+ P+ +T++ L L + + ++ K+G++ D ++
Sbjct: 391 -------GVHPNIITYNVLLHGL--CDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 494 SRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDE 549
+ G V + I+ +L+ P+ +T+M+ G + G+ ++ A+ M E G+ P+E
Sbjct: 442 CKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 110/512 (21%), Positives = 205/512 (40%), Gaps = 84/512 (16%)
Query: 88 IKSRDLNSALAVFHTM----PLRDTVTYN-LLIS-AWCFPPEQALHLYGEMGLLGIRETS 141
+ S N AL +F M PL V ++ LLI+ A E + L+ + +LGI
Sbjct: 55 LHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDL 114
Query: 142 TTFSSVLAVCARSGFHREGVQVHC--RVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
+F++++ R R + + C +++K GF ++ G+LV + +V A L
Sbjct: 115 YSFTTLIDCFCRCA--RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 200 DELP----ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNH 255
D++ E N+ ++N ++ CE G V +L+ M G+ P+ VT+ L+ +
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 256 RRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE----NVIS 311
++ S +++MG + ++ +AL+D Y G L+ AKK + + N+++
Sbjct: 233 GTWGVSARILSDMMRMG-ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVT 291
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
+NSL++ + LL +A ++ V+ G P+ + L+N +A+ + G +I C
Sbjct: 292 YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMS 351
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVV 431
+ G D + N+L G
Sbjct: 352 RDGVDGDTF--------------------------------TYNTLYQGYCQAGKFSAAE 379
Query: 432 ELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMD 491
++ G M+ G+ PD TF+ L L G G A V
Sbjct: 380 KVLGRMVSCGVHPDMYTFNILLDGLC------------------DHGKIGKALVRLE--- 418
Query: 492 AYSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEIT 551
LQ +T+ I + +I G + + + ++ KG+ PD IT
Sbjct: 419 ----------DLQKSKTVVG--IITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVIT 466
Query: 552 FLCALTGCNHTGMVKEGRILFDSMKSVHGVQP 583
++ + G + +E L+ M+ G+ P
Sbjct: 467 YITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 138/306 (45%), Gaps = 12/306 (3%)
Query: 302 EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
E+ P+ +++ ++ L+ A + + LF +++ G S + S L++ R +
Sbjct: 72 ESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLS 131
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSL 417
L +KLGF E S+ +L++ + + ++++ + + E N++
Sbjct: 132 LALSCLGKMMKLGF-EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTI 190
Query: 418 MTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS 477
+ SL G +++ M G+ PD VT+++ + L S T+ S + ++
Sbjct: 191 IDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLF--HSGTWGVSARILSDMMRM 248
Query: 478 GVEGDAAVACSLMDAYSRCGHV-ELSLQIFETLS---SPNAICFTSMINGYARNGMGKQG 533
G+ D +L+D Y + G + E Q E + +PN + + S+ING +G+ +
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 534 LAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVD 593
VL+ +V KG P+ +T+ + G V +G + M S GV D ++ +
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM-SRDGVDGDTFTYNTLYQ 367
Query: 594 LLCRAG 599
C+AG
Sbjct: 368 GYCQAG 373
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 113/564 (20%), Positives = 226/564 (40%), Gaps = 56/564 (9%)
Query: 72 NPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPP--EQA 125
NPS VYT N + + +KS + S + M R D T+N+LI+ C E++
Sbjct: 195 NPS--VYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKS 252
Query: 126 LHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLV-- 183
+L +M G T T+++VL + G + +++ + G ++V L+
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312
Query: 184 ---------GFYLNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMC 234
G+ L R++ + N +N L+ GF G V + + M
Sbjct: 313 LCRSNRIAKGYLL-------LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML 365
Query: 235 FDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANAL------VDFY 288
G+ PN VTF L+ + E K+ + G S + L +F
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 425
Query: 289 SACGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLV 348
A G + K++ + I++ ++ N L +A+ L M G P + +
Sbjct: 426 LARGFYMRMKRNGVCV---GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 482
Query: 349 GLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLT- 407
L+N + K+I C ++G + S LI + ++ ++ ++E++
Sbjct: 483 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI-IYSTLIYNCCRMGCLKEAIRIYEAMIL 541
Query: 408 ---KRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATF 464
R N L+TSL G + E M +G++P+ V+F +
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYG------- 594
Query: 465 TSSQLLHCFAL-----KSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL----SSPNAI 515
S + L F++ K G SL+ + GH+ + + ++L ++ + +
Sbjct: 595 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTV 654
Query: 516 CFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSM 575
+ +++ ++G + +++ MV++ + PD T+ ++G G +
Sbjct: 655 MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEA 714
Query: 576 KSVHGVQPDQRHFSCMVDLLCRAG 599
++ V P++ ++C VD + +AG
Sbjct: 715 EARGNVLPNKVMYTCFVDGMFKAG 738
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 115/574 (20%), Positives = 230/574 (40%), Gaps = 67/574 (11%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRDTVTYNLLISAWCFPPEQ--ALHLYGEMGLLGIR 138
NR ++ RD+ M + VTYN LI+ + + A L EM G+
Sbjct: 317 NRIAKGYLLLRDMRK------RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 370
Query: 139 ETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFL-SNVFVGGTLVGFYLNVGLREVARE 197
TF++++ G +E +++ + G S V G L G N ++AR
Sbjct: 371 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF-DLARG 429
Query: 198 LFDELPERNLAVWNV----LLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
+ + + V + ++ G C+ G ++E++ + M DG++P+ VT+ L+
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 489
Query: 254 NHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSAC--GCLVGAKKSFEAIPVE---- 307
R K++ I ++G + I + + Y+ C GCL A + +EA+ +E
Sbjct: 490 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI---YNCCRMGCLKEAIRIYEAMILEGHTR 546
Query: 308 NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIH 367
+ ++N LV+ + +A E M G P+ S L+N + E +
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 368 CHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLEC----CNSLMTSLSH 423
K+G + +L+ K + + +SL N+L+T++
Sbjct: 607 DEMTKVGHHP-TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665
Query: 424 CGATQDVVELFGLMIDEGLMPDEVTFSTTLKAL--------------SVSASATFTSSQL 469
G V LFG M+ ++PD T+++ + L A +++
Sbjct: 666 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 725
Query: 470 LH-CFA--------LKSGV-----------EGDAAVACSLMDAYSRCGHVELSLQIFETL 509
++ CF K+G+ D +++D YSR G +E + + +
Sbjct: 726 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785
Query: 510 SS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMV 565
+ PN + +++GY++ + +++ G+ PD++T + G + M+
Sbjct: 786 GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML 845
Query: 566 KEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+ G + + GV+ D+ F+ ++ C G
Sbjct: 846 EIGLKILKAF-ICRGVEVDRYTFNMLISKCCANG 878
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 111/551 (20%), Positives = 226/551 (41%), Gaps = 41/551 (7%)
Query: 110 TYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHC-- 165
Y++LI + + +L ++ MGL G + T +++L +SG E V V
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG---EDVSVWSFL 221
Query: 166 -RVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLA----VWNVLLRGFCEL 220
++K +V L+ G E + L ++ + A +N +L +C+
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
G + ++ M GV+ + T+ L+ R+ +G L + K + N
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR-MIHPNEVT 340
Query: 281 ANALVDFYSACGCLVGAKK------SFEAIPVENVISWNSLVSVNADNDLLCDALELFTV 334
N L++ +S G ++ A + SF P N +++N+L+ + +AL++F +
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSP--NHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 335 MQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCS 394
M+ G +PS S LL+ + E L + + + G G + + +ID K
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLCKNG 457
Query: 395 DIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFS 450
++ +V + ++K ++ ++L+ G + E+ + GL P+ + +S
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 451 TTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS 510
T + + + ++ + G D L+ + + G V + + ++
Sbjct: 518 TLI--YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 511 S----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVK 566
S PN + F +INGY +G G + +V M + G P T+ L G G ++
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 567 EGRILFDSMKSVHGVQP--DQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKR---DCFMWS 621
E +KS+H V D ++ ++ +C++G + + D + ++
Sbjct: 636 EAEKF---LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 692
Query: 622 SLLRS-CRSHK 631
SL+ CR K
Sbjct: 693 SLISGLCRKGK 703
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 183/461 (39%), Gaps = 79/461 (17%)
Query: 82 REIDAFIKSRDLNSALAVFHTMPLR-DTVTYNLLISAWCFPPE--QALHLYGEMGLLGIR 138
RE + F+KS H +P DTV YN L++A C +A+ L+GEM I
Sbjct: 635 REAEKFLKS---------LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 139 ETSTTFSSVLAVCARSG-------FHRE-----------------------------GVQ 162
S T++S+++ R G F +E G+
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745
Query: 163 VHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERN----LAVWNVLLRGFC 218
++ G ++ ++ Y +G E +L E+ +N L +N+LL G+
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805
Query: 219 ELGCVEESLNYYSRMCFDGVEPNGVTFCY--LLKVCSNHRRLNEGKKLQSCILKMGFVES 276
+ V S Y + +G+ P+ +T C+ +L +C ++ L G K+ + G VE
Sbjct: 806 KRKDVSTSFLLYRSIILNGILPDKLT-CHSLVLGICESNM-LEIGLKILKAFICRG-VEV 862
Query: 277 NIFVANALVDFYSACGCLVGAKKSFEAIPVENVI-------SWNSLVSVNADNDLLCDAL 329
+ + N L+ A G + A F+ + V + + +++VSV N ++
Sbjct: 863 DRYTFNMLISKCCANGEINWA---FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 919
Query: 330 ELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDM 389
+ M G SP R +GL+N R +I + + +V A+SA++
Sbjct: 920 MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNV-AESAMVRA 978
Query: 390 YGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHC----GATQDVVELFGLMIDEGLMPD 445
KC + + + + K L + T+L H G + +EL +M + GL D
Sbjct: 979 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 1038
Query: 446 EVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVA 486
V+++ + L F L ++GD +A
Sbjct: 1039 LVSYNVLITGLCAKGDMALA-------FELYEEMKGDGFLA 1072
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 122/545 (22%), Positives = 219/545 (40%), Gaps = 88/545 (16%)
Query: 110 TYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRV 167
YN LI + C + +A L+ MG +G+R T+S ++ + R G + +
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 168 VKFGFLSNVFVGGTLVGFYLNVGLREVAR----ELFDELPERNLAVWNVLLRGFCELGCV 223
V G +V+ +L+ + G A E+ ++ E + + L+ G+C G +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 224 EESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANA 283
++L Y M G+ P+ TF LL + + KL + + + V+ N N
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN-VKPNRVTYNV 547
Query: 284 LVDFYSACGCLVGA----KKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
+++ Y G + A K+ E V + S+ L+ LC L G
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG------LC----------LTG 591
Query: 340 QSPSVRSLV----------------GLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQ 383
Q+ + V GLL+ R ++ + ++ G D V
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV-CY 650
Query: 384 SALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGA-TQDVVELFG---LMID 439
LID K D + + + + R L+ + + TS+ + T D E FG LMI+
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 440 EGLMPDEVTFSTTLKAL--------------------SVSASATF-------TSSQL--- 469
EG +P+EVT++ + L SV T+ T ++
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Query: 470 ----LHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETL----SSPNAICFTSMI 521
LH LK G+ + A L+ + R G +E + ++ + SP+ I +T+MI
Sbjct: 771 KAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Query: 522 NGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGV 581
N R K+ + + ++M EKG++PD + + + GC G + + L + M G+
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR-QGL 888
Query: 582 QPDQR 586
P+ +
Sbjct: 889 IPNNK 893
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 111/570 (19%), Positives = 210/570 (36%), Gaps = 122/570 (21%)
Query: 81 NREIDAFIKSRDLNSALAVFHTMPLRD----TVTYNLLISAWCFPPE--QALHLYGEMGL 134
N ID K + + A+ + + +D VTY L+ C E L + EM
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325
Query: 135 LGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREV 194
L + SS++ + G E + + RVV FG N+FV
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV---------------- 369
Query: 195 ARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSN 254
+N L+ C+ E+ + RM G+ PN VT+ L+ +
Sbjct: 370 ---------------YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 414
Query: 255 HRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVEN-----V 309
+L+ ++ G ++ +++ N+L++ + G + A + F A + V
Sbjct: 415 RGKLDTALSFLGEMVDTG-LKLSVYPYNSLINGHCKFGD-ISAAEGFMAEMINKKLEPTV 472
Query: 310 ISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCH 369
+++ SL+ + AL L+ M G +PS+ + LL+ RA GL
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA---GL------- 522
Query: 370 ALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCG 425
I +V +F + + ++ N ++ G
Sbjct: 523 --------------------------IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 426 ATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASAT------------------FTSS 467
E M ++G++PD ++ + L ++ A+ +
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 468 QLLHCF---------------ALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS- 511
LLH F ++ GV+ D L+D + +L + + +
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 512 ---PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEG 568
P+ + +TSMI+ ++ G K+ + M+ +G P+E+T+ + G G V E
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 569 RILFDSMKSVHGVQPDQRHFSCMVDLLCRA 598
+L M+ V V P+Q + C +D+L +
Sbjct: 737 EVLCSKMQPVSSV-PNQVTYGCFLDILTKG 765
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 152/383 (39%), Gaps = 53/383 (13%)
Query: 206 NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQ 265
N+ +NVL+ G C+ V E++ + ++P+ VT+C L+ + G ++
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 266 SCILKMGFVESNIFVANALVDFYSACGCLVGA----KKSFEAIPVENVISWNSLVSVNAD 321
+L + F S V+ +LV+ G + A K+ + N+ +N+L+
Sbjct: 321 DEMLCLRFSPSEAAVS-SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG-----LGKQIHCHALKLGFD 376
+A LF M G P+ + L++ R ++ LG+ + LKL
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT-GLKL--- 435
Query: 377 EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVE 432
SV+ ++LI+ + K DI ++ + + LE SLM G +
Sbjct: 436 --SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 433 LFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDA 492
L+ M +G+ P TF+T L L ++G+ DA
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGL------------------FRAGLIRDA--------- 526
Query: 493 YSRCGHVELSLQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITF 552
V+L ++ E PN + + MI GY G + L M EKG+ PD ++
Sbjct: 527 ------VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 553 LCALTGCNHTGMVKEGRILFDSM 575
+ G TG E ++ D +
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGL 603
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 167/410 (40%), Gaps = 54/410 (13%)
Query: 202 LPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
LPE + + LL G + ++ ++ M G+ P+ + +++ + L+
Sbjct: 189 LPE--VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRA 246
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
K++ + + G + NI N L+D L +K +EA+ ++ ++ L
Sbjct: 247 KEMIAHMEATG-CDVNIVPYNVLID------GLCKKQKVWEAVGIKKDLAGKDL------ 293
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
P V + L+ + +E +G ++ L L F S
Sbjct: 294 -------------------KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP-SEA 333
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLE--------CCNSLMTSLSHCGATQDVVEL 433
A S+L++ K IE ++ +L KR ++ N+L+ SL + L
Sbjct: 334 AVSSLVEGLRKRGKIEEAL----NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 434 FGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAY 493
F M GL P++VT+S + S L + +G++ SL++ +
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE--MVDTGLKLSVYPYNSLINGH 447
Query: 494 SRCGHVELS----LQIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDE 549
+ G + + ++ P + +TS++ GY G + L + H M KG+ P
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 550 ITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
TF L+G G++++ LF+ M + V+P++ ++ M++ C G
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWN-VKPNRVTYNVMIEGYCEEG 556
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 43/220 (19%)
Query: 50 MQQRHQSLSFSFIRAQTTTTPRNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLRDTV 109
++ + + L F ++ + P D +YT IDA K+ D A +
Sbjct: 658 LKHKDRKLFFGLLK-EMHDRGLKPDDVIYTSM--IDAKSKTGDFKEAFGI---------- 704
Query: 110 TYNLLISAWCFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVK 169
++L+I+ C P E T+++V+ ++GF E + ++
Sbjct: 705 -WDLMINEGCVPNE------------------VTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 170 FGFLSNVFVGGTLVGFYLN--VGLREVARELFDELPE---RNLAVWNVLLRGFCELGCVE 224
+ N G + V +++ A EL + + + N A +N+L+RGFC G +E
Sbjct: 746 VSSVPNQVTYGCFLDILTKGEVDMQK-AVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 225 ESLNYYSRMCFDGVEPNGVTFCYLL-KVCSNHRRLNEGKK 263
E+ +RM DGV P+ +T+ ++ ++C R N+ KK
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELC----RRNDVKK 840
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 166/393 (42%), Gaps = 25/393 (6%)
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
G +E++ + M G+ P + L++ + + +G +L + K V S +
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP-YT 419
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQ 336
+V + G L GA + + NV+ + +L+ N DA+ + M+
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 337 LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
G +P + L+ S+A+ + + ++ G + + A I Y + S+
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL-KPNAFTYGAFISGYIEASEF 538
Query: 397 ESSVAVFESLTKRTLEC--------CNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVT 448
S+ + K EC C L+ G + + M+D+G++ D T
Sbjct: 539 ASA----DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 449 FSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFET 508
++ + L + ++ + G+ D L++ +S+ G+++ + IF+
Sbjct: 595 YTVLMNGLF--KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 509 LS----SPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGM 564
+ +PN I + ++ G+ R+G ++ +L M KGL P+ +T+ + G +G
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Query: 565 VKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCR 597
+ E LFD MK + G+ PD ++ +VD CR
Sbjct: 713 LAEAFRLFDEMK-LKGLVPDSFVYTTLVDGCCR 744
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 104/527 (19%), Positives = 211/527 (40%), Gaps = 56/527 (10%)
Query: 110 TYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRV 167
Y LI +C Q L EM I + T+ +V+ SG + +
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443
Query: 168 VKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLA----VWNVLLRGFCELGCV 223
+ G NV + TL+ +L A + E+ E+ +A +N L+ G + +
Sbjct: 444 IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 224 EESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANA 283
+E+ ++ M +G++PN T+ + K + + G V N +
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG-VLPNKVLCTG 562
Query: 284 LVDFYSACGCLVGAKKSFEAIPVENVI----SWNSLVSVNADNDLLCDALELFTVMQLWG 339
L++ Y G ++ A ++ ++ + ++ ++ L++ ND + DA E+F M+ G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 340 QSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESS 399
+P V S L+N S+ + I ++ G +V + L+ + + +IE +
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP-NVIIYNMLLGGFCRSGEIEKA 681
Query: 400 VAVFESLTKRTLECCN----SLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTL-- 453
+ + ++ + L +++ G + LF M +GL+PD ++T +
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741
Query: 454 --------KALSV-------SASATFTSSQLLHCFALKSGVEGDAAVACSLMD-AYSRCG 497
+A+++ AS+T + L++ E V LMD ++ R G
Sbjct: 742 CCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 498 ------------------HVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLA 535
++E + ++F + + P I +TS++NGY + G +
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 536 VLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQ 582
V + G++PD I + + GM + +L D M + + V
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 98/510 (19%), Positives = 205/510 (40%), Gaps = 43/510 (8%)
Query: 71 RNPSDCVYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPPE--Q 124
RN YT + S DL+ A + M + V Y LI +
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 125 ALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVG 184
A+ + EM GI ++S++ +++ E +V+ G N F G +
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 185 FYLNVGLREVARELFDELPE----RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEP 240
Y+ A + E+ E N + L+ +C+ G V E+ + Y M G+
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 241 NGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKS 300
+ T+ L+ + ++++ +++ + G + ++F L++ +S G + A
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 301 FEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSR 356
F+ + E NVI +N L+ + + A EL M + G P+ + +++ +
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 357 AEEIGLGKQIHCHALKLGFDEGSVHA-------QSALIDMYGKCSDIESSVAVFESLTK- 408
+ ++ A +L FDE + + L+D + +D+E ++ +F + K
Sbjct: 710 SGDLA-------EAFRL-FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761
Query: 409 --RTLECCNSLMTSLSHCGATQDVVELFGLMIDEGL----MPDEVTFSTTLKALSVSASA 462
+ N+L+ + G T+ E+ ++D P++VT++ + L +
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 463 TFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIF-ETLSS---PNAICFT 518
+ +L H + + SL++ Y + G +F E +++ P+ I ++
Sbjct: 822 E-AAKELFHQMQ-NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 519 SMINGYARNGMGKQGLAVLHAMVEKGLKPD 548
+IN + + GM + L ++ M K D
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDD 909
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/503 (20%), Positives = 196/503 (38%), Gaps = 90/503 (17%)
Query: 93 LNSALAVFHTM----PLRDTVTYNLLISAWCF--PPEQALHLYGEMGLLGIRETSTTFSS 146
LN A+ +F M P V +N L+SA + + L +M +LGIR TF+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 147 VLAVCARSGFHRE-GVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPE- 204
V+ C F + + +++K G+ + G+LV + A L D++ E
Sbjct: 126 VIN-CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 205 ---RNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEG 261
++ +N ++ C+ V ++ +++ + G+ PN VT+ L+ N R ++
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 262 KKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNSLVSVNAD 321
+L S ++K NVI++++L+
Sbjct: 245 ARLLSDMIKKKITP--------------------------------NVITYSALLDAFVK 272
Query: 322 NDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVH 381
N + +A ELF M P + + L+N + I Q+ + G V
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC-LADVV 331
Query: 382 AQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGATQDVVELFGLM 437
+ + LI+ + K +E + +F +++R L N+L+ G E F M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 438 IDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCG 497
G+ PD T++ L L + G
Sbjct: 392 DFFGISPDIWTYNILLGGLCDN-------------------------------------G 414
Query: 498 HVELSLQIFETLSSP----NAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFL 553
+E +L IFE + + + +T++I G + G ++ ++ ++ KGLKPD +T+
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 554 CALTGCNHTGMVKEGRILFDSMK 576
++G G++ E L+ MK
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMK 497
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/498 (18%), Positives = 203/498 (40%), Gaps = 88/498 (17%)
Query: 73 PSDCVYTKNREIDAFIKSRDLNSALAVFHTMPL----RDTVTYNLLISAWC--FPPEQAL 126
P + NR + A +K + + +++ M + D T+N++I+ +C F AL
Sbjct: 81 PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 127 HLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFY 186
+ G+M LG T S++ R + V + ++V+ G+
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY-------------- 186
Query: 187 LNVGLREVARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFC 246
+ ++ +N ++ C+ V ++ +++ + G+ PN VT+
Sbjct: 187 -----------------KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229
Query: 247 YLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPV 306
L+ N R ++ +L S ++K + N+ +AL+D + G ++ AK+ FE +
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 307 ----ENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGL 362
++++++SL++ +D + +A ++F +M G
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG----------------------- 325
Query: 363 GKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTL----ECCNSLM 418
C A V + + LI+ + K +E + +F +++R L N+L+
Sbjct: 326 -----CLA--------DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 419 TSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSG 478
G E F M G+ PD T++ L L + + ++ K
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL--CDNGELEKALVIFEDMQKRE 430
Query: 479 VEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGL 534
++ D +++ + G VE + +F +LS P+ + +T+M++G G+ +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 535 AVLHAMVEKGLKPDEITF 552
A+ M ++GL ++ T
Sbjct: 491 ALYTKMKQEGLMKNDCTL 508
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 130/318 (40%), Gaps = 21/318 (6%)
Query: 291 CGCLVGAKKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGL 350
C C V A S + +S L + L DA++LF+ M PS+ L
Sbjct: 37 CRCWVRASSSVSGGDLRERLSKTRLRDIK-----LNDAIDLFSDMVKSRPFPSIVDFNRL 91
Query: 351 LNSCSRAEE----IGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESL 406
L++ + ++ I LGK++ ++ ++ + +I+ + C + ++++ +
Sbjct: 92 LSAIVKLKKYDVVISLGKKMEVLGIR-----NDLYTFNIVINCFCCCFQVSLALSILGKM 146
Query: 407 TKRTLE----CCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKAL--SVSA 460
K E SL+ D V L M++ G PD V ++ + +L +
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206
Query: 461 SATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSSPNAICFTSM 520
+ F + + ++ V A+ L ++ L + + +PN I ++++
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 521 INGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHG 580
++ + +NG + + MV + PD +T+ + G + E +FD M S G
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS-KG 325
Query: 581 VQPDQRHFSCMVDLLCRA 598
D ++ +++ C+A
Sbjct: 326 CLADVVSYNTLINGFCKA 343
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/469 (19%), Positives = 192/469 (40%), Gaps = 79/469 (16%)
Query: 141 STTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFD 200
++TF++++ + ++G + + ++K G + T++ G A L
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 201 ELPERNLA----VWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
++ E+ ++ +N+LL + G +E +L YY ++ G+ P+ VT +L + +
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 257 RLNEGKKLQSCILKM--GFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVENVISWNS 314
+ E +++ I +M + + ++ Y G +V AK FE ++ V+S +
Sbjct: 425 MVAE---VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTT 481
Query: 315 LVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLG 374
L +V ++++ LW + AE + GK+ +
Sbjct: 482 LAAV----------IDVYAEKGLWVE----------------AETVFYGKR------NMS 509
Query: 375 FDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELF 434
V + +I YGK E ++++F+
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKG----------------------------- 540
Query: 435 GLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYS 494
M ++G PDE T+++ + L+ +Q + L SG + +++ +Y
Sbjct: 541 --MKNQGTWPDECTYNSLFQMLA--GVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYV 596
Query: 495 RCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEI 550
R G + ++ ++E + PN + + S+ING+A +GM ++ + M E G++ + I
Sbjct: 597 RLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHI 656
Query: 551 TFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+ + G ++E R ++D MK G PD + M+ L G
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYDKMKDSEG-GPDVAASNSMLSLCADLG 704
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 107/510 (20%), Positives = 195/510 (38%), Gaps = 95/510 (18%)
Query: 107 DTVTYNLLISAWCFPP--EQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVH 164
D + YN++I A+ E+AL L+ M G T++S+ + A E ++
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 165 CRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPER----NLAVWNVLLRGFCEL 220
++ G ++ Y+ +GL A +L++ + + N V+ L+ GF E
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
G VEE++ Y+ M E +GV +SN V
Sbjct: 634 GMVEEAIQYFRMM-----EEHGV-------------------------------QSNHIV 657
Query: 281 ANALVDFYSACGCLVGAKKSFEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQ 336
+L+ YS GCL A++ ++ + +V + NS++S+ AD ++ +A +F ++
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALR 717
Query: 337 LWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
G C + + ++ +Y +
Sbjct: 718 EKGT---------------------------CDVISF----------ATMMYLYKGMGML 740
Query: 397 ESSVAVFESLTKRTL--ECC--NSLMTSLSHCGATQDVVELF-GLMIDEGLMPDEVTFST 451
+ ++ V E + + L +C N +M + G + ELF ++++ L+ D TF T
Sbjct: 741 DEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKT 800
Query: 452 TLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS 511
L + SQL + + A+ +L A + S Q +
Sbjct: 801 LFTLLKKGGVPSEAVSQLQTAYNEAKPL-ATPAITATLFSAMGLYAYALESCQELTSGEI 859
Query: 512 PNA-ICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEIT--FLCALTGCNHTGMVKEG 568
P + ++I Y+ +G L M EKGL+PD +T +L + G GMV EG
Sbjct: 860 PREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYG--KAGMV-EG 916
Query: 569 RILFDSMKSVHGVQPDQRHFSCMVDLLCRA 598
S + ++P Q F + D A
Sbjct: 917 VKRVHSRLTFGELEPSQSLFKAVRDAYVSA 946
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 192/451 (42%), Gaps = 56/451 (12%)
Query: 175 NVFVGGTLVGFYLNVGLRE-VARELFDELPERNLAVWNVLLRGFCELGCVEESLNYYSRM 233
N+F+ +L+G G E + +++ +E N+ +N L+ + E G ++L
Sbjct: 186 NLFIYNSLLGAMRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLT 245
Query: 234 CFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSA--C 291
G EPN +T+ L V +RR+ +G MG +E FV L + Y+
Sbjct: 246 KEKGFEPNPITYSTALLV---YRRMEDG---------MGALE--FFVE--LREKYAKREI 289
Query: 292 GCLVGAKKSFEAIPVENVIS---------WNSLVSVNADNDLLCDALELFTVMQLWGQSP 342
G VG FE + +EN I W LV D++ L+L M G P
Sbjct: 290 GNDVGYDWEFEFVKLENFIGRICYQVMRRW--LVK---DDNWTTRVLKLLNAMDSAGVRP 344
Query: 343 SVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAV 402
S L+ +C+R E +GK+++ ++ F E S+ + LI + GK +++ +
Sbjct: 345 SREEHERLIWACTREEHYIVGKELY-KRIRERFSEISLSVCNHLIWLMGKAKKWWAALEI 403
Query: 403 FESLTKRTLEC-----------CNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFST 451
+E L E N L+++ S G + V L M D+GL P ++
Sbjct: 404 YEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNA 463
Query: 452 TLKALSVSASATFTSSQLLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS 511
L A S AS T + Q+ + +G + +L+ A + + + +++ +
Sbjct: 464 VLVACS-KASETTAAIQIFKAM-VDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIK 521
Query: 512 ----PNAICFTSMINGYARNGMGKQGL--AVLHAMVEKGLKPDEITFLCALTGCNHTGMV 565
PN +T+M + G K L +L M KG++P +TF ++GC G+
Sbjct: 522 VGIEPNLYAYTTMAS--VLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS 579
Query: 566 KEGRILFDSMKSVHGVQPDQRHFSCMVDLLC 596
F MKS V+P++ + +++ L
Sbjct: 580 GVAYEWFHRMKS-ENVEPNEITYEMLIEALA 609
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/527 (20%), Positives = 216/527 (40%), Gaps = 98/527 (18%)
Query: 107 DTVTYNLLISA------WCFPPEQALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREG 160
D TY+ LI+A W + A++L +M I + +T+++++ C SG RE
Sbjct: 177 DAETYDALINAHGRAGQWRW----AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREA 232
Query: 161 VQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELP----ERNLAVWNVLLRG 216
++V ++ G ++ ++ Y + A F+ + + +N+++
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 292
Query: 217 FCELGCVEESLNYYSRMCFDGVE--PNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFV 274
+LG ++L+ ++ M E P+ VTF ++ + S + + + ++ G +
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG-L 351
Query: 275 ESNIFVANALVDFYSACG-------------------------CLVG----------AKK 299
+ NI NAL+ Y+ G CL+ AK+
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 300 SFEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCS 355
F + E NV+++N+L+ N L +A+E+F M+ G P+V S+ LL +CS
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Query: 356 RAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLECCN 415
R+++ + A G + + SA I Y +++E ++A+++S+ K+ ++ +
Sbjct: 472 RSKKKVNVDTVLSAAQSRGINLNTAAYNSA-IGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 416 SLMTSL--SHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCF 473
T L C ++ P+ +++ ++ LS+ + SS
Sbjct: 531 VTFTILISGSCRMSK--------------YPEAISYLKEMEDLSIPLTKEVYSS------ 570
Query: 474 ALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGM 529
V C AYS+ G V + IF + P+ I +TSM++ Y +
Sbjct: 571 -----------VLC----AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEK 615
Query: 530 GKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMK 576
+ + M G++PD I + N G +L D M+
Sbjct: 616 WGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 662
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 160/393 (40%), Gaps = 33/393 (8%)
Query: 312 WNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
+N ++ ++A ++ + A LF MQ W P + L+N+ RA + + L
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 372 KLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR----TLECCNSLMTSLSHCGAT 427
+ S + LI+ G + ++ V + +T L N ++++
Sbjct: 206 RAAIAP-SRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCF----ALKSGVEGDA 483
+ F LM + PD TF+ + LS SSQ L F ++ D
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ----SSQALDLFNSMREKRAECRPDV 320
Query: 484 AVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGYARNGMGKQGLAVLHA 539
S+M YS G +E +FE + + PN + + +++ YA +GM L+VL
Sbjct: 321 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 380
Query: 540 MVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
+ + G+ PD +++ C L + + + +F M+ +P+ ++ ++D G
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK-ERRKPNVVTYNALIDAYGSNG 439
Query: 600 XXXXXXXXXXQTPD---KRDCFMWSSLLRSC-RSHKNEEVGT--RAAQVLVELDPDDPAV 653
Q K + +LL +C RS K V T AAQ +
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ--------SRGI 491
Query: 654 WLQASNFYAEIGNFDASREI-REVALARKMTRE 685
L + + + IG++ + E+ + +AL + M ++
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKK 524
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 184/469 (39%), Gaps = 73/469 (15%)
Query: 185 FYLNVGLREVARE--------LFDELPERNLA----VWNVLLRGFCELGCVEESLNYYSR 232
F NV LR V R LFDE+ +R LA ++ L+ F + G + +L++ +
Sbjct: 156 FAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQK 215
Query: 233 MCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCI--LKMGFVESNIFVANALVDFYSA 290
M D V + V + L+++ RRL + K S LK + ++ N++++ Y
Sbjct: 216 MEQDRVSGDLVLYSNLIELS---RRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 291 CGCLVGA----KKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ---------- 336
A K+ EA + N +S+++L+SV +N +AL +F M+
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 337 ------LWGQ-------------------SPSVRSLVGLLNSCSRAEEIGLGKQIHCHAL 371
++GQ P+V S +L AE G+ IH L
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE--LFGEAIHLFRL 390
Query: 372 KLGFD-EGSVHAQSALIDMYGKCSDIESSVAVFESLTKRTLE----CCNSLMTSLSHCGA 426
D E +V + +I +YGK + E + + + + R +E +++++ G
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 450
Query: 427 TQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVEGDAAVA 486
LF + G+ D+V + T + A + +LLH L + + A+
Sbjct: 451 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYE-RVGLMGHAKRLLHELKLPDNIPRETAIT 509
Query: 487 CSLMDAYSRCGHVELSL----QIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVE 542
++ G E + Q FE+ + F MIN Y+RN + V M
Sbjct: 510 I-----LAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRT 564
Query: 543 KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCM 591
G PD L ++ ++ M+ V PD+ HF +
Sbjct: 565 AGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 195/498 (39%), Gaps = 41/498 (8%)
Query: 78 YTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLI--SAWCFPPEQALHLYGE 131
YT + I +F K +SAL+ M D V Y+ LI S +A+ ++
Sbjct: 191 YTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSR 250
Query: 132 MGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGL 191
+ GI ++S++ V ++ RE + + + G L N TL+ Y+
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 310
Query: 192 REVARELFDELPERN----LAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCY 247
A +F E+ E N L N+++ + +L V+E+ + + +EPN V++
Sbjct: 311 FLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNT 370
Query: 248 LLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFY------SACGCLVGAKKSF 301
+L+V E L + + +E N+ N ++ Y LV +S
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKD-IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR 429
Query: 302 EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIG 361
P N I++++++S+ L A LF ++ G ++ + R +G
Sbjct: 430 GIEP--NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMG 487
Query: 362 LGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAV----FESLTKRTLECCNSL 417
K++ H LKL ++ ++A I + K E + V FES + + +
Sbjct: 488 HAKRL-LHELKLP---DNIPRETA-ITILAKAGRTEEATWVFRQAFESGEVKDISVFGCM 542
Query: 418 MTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKS 477
+ S +V+E+F M G PD + L A F + ++ +
Sbjct: 543 INLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAY--GKQREFEKADTVYREMQEE 600
Query: 478 GVEGDAAVACSLMDAYSRCGHVELSLQIFETL-SSPNA------ICFTSMINGYARNGMG 530
G V ++ YS E+ +F+ L S PN + ++ Y R
Sbjct: 601 GCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAAL---YERADKL 657
Query: 531 KQGLAVLHAMVEKG-LKP 547
V++ M E+G LKP
Sbjct: 658 NDASRVMNRMRERGILKP 675
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 14/302 (4%)
Query: 305 PVENVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNSCSRAEEIGLGK 364
P +I ++ L SV A L+L M+L G + ++ +L ++N C R ++ L
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 365 QIHCHALKLGFDEGSVHAQSALID---MYGKCSD-IESSVAVFESLTKRTLECCNSLMTS 420
+KLG++ +V S LI+ + G+ S+ +E + E K TL N+L+
Sbjct: 128 SAMGKIIKLGYEPDTV-TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG 186
Query: 421 LSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSGVE 480
L G D V L M++ G P+EVT+ LK + S T + +LL + ++
Sbjct: 187 LCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ-TALAMELLRKMEERK-IK 244
Query: 481 GDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTSMINGYARNGMGKQGLAV 536
DA ++D + G ++ + +F + + I +T++I G+ G G +
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKL 304
Query: 537 LHAMVEKGLKPDEITFLCALTGC-NHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLL 595
L M+++ + PD + F AL C G ++E L M G+ PD ++ ++D
Sbjct: 305 LRDMIKRKITPDVVAF-SALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGF 362
Query: 596 CR 597
C+
Sbjct: 363 CK 364
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/495 (19%), Positives = 200/495 (40%), Gaps = 64/495 (12%)
Query: 125 ALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVG 184
L L +M L GI T S ++ C R +++K G+ + TL+
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN 150
Query: 185 FYLNVGLREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEP 240
G A EL D + E L N L+ G C G V +++ RM G +P
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 241 NGVTFCYLLKV-CSNHRR---LNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVG 296
N VT+ +LKV C + + + +K++ +K+ V+ +I + D G L
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD-----GSLDN 265
Query: 297 AKKSFEAIPVE----NVISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLN 352
A F + ++ ++I + +L+ D +L M +P V + L++
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 353 SCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVFESLTKR--- 409
+ ++ +++H ++ G +V ++LID + K + ++ + + + + +
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTV-TYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 410 -TLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQ 468
+ N L+ D +ELF M G++ D VT++T
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT----------------- 427
Query: 469 LLHCFALKSGVEGDAAVACSLMDAYSRCGHVELSLQIFETLSS----PNAICFTSMINGY 524
L+ + G +E++ ++F+ + S P+ + + +++G
Sbjct: 428 --------------------LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 525 ARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPD 584
NG ++ L + + + ++ D + + G + V + LF S+ + GV+PD
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPD 526
Query: 585 QRHFSCMVDLLCRAG 599
+ ++ M+ LC+ G
Sbjct: 527 VKTYNIMIGGLCKKG 541
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 189/455 (41%), Gaps = 67/455 (14%)
Query: 107 DTVTYNLLISAWCFPPE--QALHLYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVH 164
DTVT++ LI+ C +AL L M +G + T T ++++ +G + V +
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 165 CRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELFDELPERNLAV----WNVLLRGFCEL 220
R+V+ GF N G ++ G +A EL ++ ER + + +++++ G C+
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 221 GCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFV 280
G ++ + N ++ M G + + + + L++ R ++G KL ++K + ++
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK-ITPDVVA 319
Query: 281 ANALVDFYSACGCLVGA----KKSFEAIPVENVISWNSLVSVNADNDLLCDALELFTVMQ 336
+AL+D + G L A K+ + + +++ SL+ + L A + +M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 337 LWGQSPSVRSLVGLLNSCSRAEEIGLGKQ--------------IHCHALKLGFDE-GSVH 381
G P++R+ L+N +A I G + + + L GF E G +
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 382 AQSAL-----------------IDMYGKCS--DIESSVAVFESLTKRTLECCNSLMTSLS 422
L I + G C + E ++ +FE + K +E + +
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 423 H--CGATQ--DVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALKSG 478
H C A++ D +LF + +G+ PD T++ + L S + + LL + G
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS--LSEADLLFRKMEEDG 557
Query: 479 ----------------VEGDAAVACSLMDAYSRCG 497
EGDA + L++ RCG
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 120/278 (43%), Gaps = 17/278 (6%)
Query: 84 IDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWCFPP--EQALHLYGEMGLLGI 137
ID K L++A +F+ M ++ D + Y LI +C+ + L +M I
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 138 RETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARE 197
FS+++ + G RE ++H +++ G + +L+ + + A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 198 LFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCS 253
+ D + + N+ +N+L+ G+C+ +++ L + +M GV + VT+ L++
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 254 NHRRLNEGKKL-QSCILKMGFVESNIFVANALVDFYSACGCLVGAKKSFEAIPVE----N 308
+L K+L Q + + V +I L+D G A + FE I +
Sbjct: 434 ELGKLEVAKELFQEMVSRR--VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491
Query: 309 VISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRS 346
+ +N ++ + + DA +LF + L G P V++
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Query: 77 VYTKNREIDAFIKSRDLNSALAVFHTMPLR----DTVTYNLLISAWC--FPPEQALHLYG 130
+ T N I+ + K+ ++ L +F M LR DTVTYN LI +C E A L+
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 131 EMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVG 190
EM +R ++ +L +G + +++ ++ K ++ + ++ N
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 191 LREVARELFDELPER----NLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFC 246
+ A +LF LP + ++ +N+++ G C+ G + E+ + +M DG PNG T+
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 247 YLLKVCSNHRRLNEGKKLQSCILKMGF 273
L++ + KL I + GF
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGF 593
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 428 QDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTSSQLLHCFALK-SGVEGDAAVA 486
D V+LF M P + FS + SV A L C ++ G+ +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFS---RLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTL 110
Query: 487 CSLMDAYSRCGHVELSL----QIFETLSSPNAICFTSMINGYARNGMGKQGLAVLHAMVE 542
+++ RC + L+ +I + P+ + F+++ING G + L ++ MVE
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 543 KGLKPDEITFLCALTGCNHTGMVKEGRILFDSMKSVHGVQPDQRHFSCMVDLLCRAG 599
G KP IT + G G V + +L D M G QP++ + ++ ++C++G
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSG 226
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 109/578 (18%), Positives = 236/578 (40%), Gaps = 46/578 (7%)
Query: 128 LYGEMGLLGIRETSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYL 187
L+ EM GI+ ++T+ +++ V ++ G + ++ K G + G ++ Y
Sbjct: 209 LWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYK 268
Query: 188 NVGLREVARELFDELP-ERNLA---------VWNVLLRGFCELGCVEESLNYYSRMCFDG 237
+ A E F + + N A +N ++ + + G ++E+ + RM +G
Sbjct: 269 KAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEG 328
Query: 238 VEPNGVTFCYLLKVCSNHRRLNEGKKLQSCILKMGFVESNIFVANALVDFYSACGCLVGA 297
+ P VTF ++ + N+ +L E L + ++ + N L+ ++ + A
Sbjct: 329 IVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTY--NILISLHTKNNDIERA 386
Query: 298 KKSFEAIPVENV----ISWNSLVSVNADNDLLCDALELFTVMQLWGQSPSVRSLVGLLNS 353
F+ + + + +S+ +L+ + ++ +A L M + L
Sbjct: 387 GAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRM 446
Query: 354 CSRAEEIGLG----KQIHCHALKLGFDEGSVHAQSALIDMYGKCSDIESSVAVF---ESL 406
AE + K+ H S SA ID YG+ + + VF + +
Sbjct: 447 YVEAEMLEKSWSWFKRFHVAG------NMSSEGYSANIDAYGERGYLSEAERVFICCQEV 500
Query: 407 TKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKALSVSASATFTS 466
KRT+ N ++ + + + ELF M+ G+ PD+ T++T ++ L ASA
Sbjct: 501 NKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQIL---ASADMPH 557
Query: 467 SQLLHCFALK---SGVEGDAAVACSLMDAYSRCGHVELSLQIFETLS----SPNAICFTS 519
C+ K +G D C+++ ++ + G + ++ ++++ + P+ + +
Sbjct: 558 KG--RCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGV 615
Query: 520 MINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTGMVKEGRILFDS-MKSV 578
+IN +A G +Q ++ + AM E G+ + + + + G + E ++ ++S
Sbjct: 616 LINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSC 675
Query: 579 HGVQ-PDQRHFSCMVDLLCRAGXXXXXXXXXXQTPDKRDCFMWSSLLRSCRSHKNE--EV 635
+ Q PD +CM++L + + ++ + C KN E
Sbjct: 676 NKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEE 735
Query: 636 GTRAAQVLVELDP-DDPAVWLQASNFYAEIGNFDASRE 672
T+ A+ + E+ DP + +A G F + E
Sbjct: 736 ATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVE 773
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 114/575 (19%), Positives = 214/575 (37%), Gaps = 128/575 (22%)
Query: 140 TSTTFSSVLAVCARSGFHREGVQVHCRVVKFGFLSNVFVGGTLVGFYLNVGLREVARELF 199
+S T+++++ +SG +E + R+++ G + T++ Y N G L
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356
Query: 200 DELP---ERNLAVWNVLLRGFCELGCVEESLNYYSRMCFDGVEPNGVTFCYLLKVCSNHR 256
+ + +N+L+ + +E + Y+ M DG++P+ V++ LL S
Sbjct: 357 KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRH 416
Query: 257 RLNEGKKL---------------QSCILKMGFVESNIF-----------VA--------N 282
+ E + L QS + +M +VE+ + VA +
Sbjct: 417 MVEEAEGLIAEMDDDNVEIDEYTQSALTRM-YVEAEMLEKSWSWFKRFHVAGNMSSEGYS 475
Query: 283 ALVDFYSACGCLVGAKKSF---EAIPVENVISWNSLVSVNADNDLLCDALELFTVMQLWG 339
A +D Y G L A++ F + + VI +N ++ + A ELF M +G
Sbjct: 476 ANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYG 535
Query: 340 QSP---SVRSLVGLLNSCSRAEEIGLGKQIHCHALKLGFDEGSVHAQSALIDMYGKCSDI 396
+P + +LV +L S + + C+ K+ G SD
Sbjct: 536 VTPDKCTYNTLVQILASAD------MPHKGRCYLEKM--------------RETGYVSDC 575
Query: 397 ESSVAVFESLTKRTLECCNSLMTSLSHCGATQDVVELFGLMIDEGLMPDEVTFSTTLKAL 456
AV S K G E++ M++ + PD V + + A
Sbjct: 576 IPYCAVISSFVK---------------LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Query: 457 SVSASATFTSSQLLHCFALK-SGVEGDAAVACSLMDAYSRCGHVELSLQIFETL------ 509
+ + + + + A+K +G+ G++ + SL+ Y++ G+++ + I+ L
Sbjct: 621 ADTGNV---QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNK 677
Query: 510 -SSPNAICFTSMINGYARNGMGKQGLAVLHAMVEKGLKPDEITFLCALTGCNHTG----- 563
P+ MIN Y+ M ++ A+ +M ++G + +E TF L G
Sbjct: 678 TQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEA 736
Query: 564 -----MVKEGRILFD--SMKSV----------------------HGVQPDQRHFSCMVDL 594
++E +IL D S SV G+QPD F + +
Sbjct: 737 TQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTI 796
Query: 595 LCRAGXXXXXXXXXXQTPD---KRDCFMWSSLLRS 626
L + G + KR +W S L S
Sbjct: 797 LMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSS 831