Miyakogusa Predicted Gene

Lj0g3v0314519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0314519.1 Non Chatacterized Hit- tr|I1HKM3|I1HKM3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,55.77,1e-18,IPP-2,Protein phosphatase inhibitor 2 (IPP-2); GB DEF:
ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME ,CUFF.21237.1
         (180 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G52200.1 | Symbols:  | phosphoprotein phosphatase inhibitors ...   112   2e-25
AT5G52200.2 | Symbols:  | phosphoprotein phosphatase inhibitors ...   110   6e-25

>AT5G52200.1 | Symbols:  | phosphoprotein phosphatase inhibitors |
           chr5:21202818-21204719 REVERSE LENGTH=191
          Length = 191

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 96/172 (55%), Gaps = 10/172 (5%)

Query: 2   KGRVKWDEDNIGEIEANKPVRQKITEPKTPYHPMIDDDNSGSPVRGSFDACIDDENQTRH 61
           +GRV+WDE NI EIE+NKPVRQKITEPKTPYHPM+DDD S SP   +FD C+DD    + 
Sbjct: 6   RGRVQWDEANIVEIESNKPVRQKITEPKTPYHPMMDDDGSLSPRGRAFDECVDD---MQR 62

Query: 62  AEAIWTALNDVASSSKKDTGQSGGWTSSXXXXXXXXXX------XXXXXXXRNLAFKEHR 115
           AE +   LND A+SS +++ Q  G                           +N  F  HR
Sbjct: 63  AEELRNVLNDAAASSSRNSSQGSGGGGWSSSDEEEEEADPMDQDEEGSGSGKNERFNAHR 122

Query: 116 KAHYDEFLKVKEHRQKASL-EDESDEDGDAEPSKGEKKCESSSLSDSVKEMD 166
           KAHYDEF KVKE R   S  E+E +ED  A+ SK E    S       KE+D
Sbjct: 123 KAHYDEFRKVKELRSSGSFYEEEEEEDDGAKGSKSETTTNSRHTKGGNKELD 174


>AT5G52200.2 | Symbols:  | phosphoprotein phosphatase inhibitors |
           chr5:21202818-21204017 REVERSE LENGTH=211
          Length = 211

 Score =  110 bits (274), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/173 (45%), Positives = 96/173 (55%), Gaps = 10/173 (5%)

Query: 1   MKGRVKWDEDNIGEIEANKPVRQKITEPKTPYHPMIDDDNSGSPVRGSFDACIDDENQTR 60
           + GRV+WDE NI EIE+NKPVRQKITEPKTPYHPM+DDD S SP   +FD C+DD    +
Sbjct: 25  ILGRVQWDEANIVEIESNKPVRQKITEPKTPYHPMMDDDGSLSPRGRAFDECVDD---MQ 81

Query: 61  HAEAIWTALNDVASSSKKDTGQSGGWTSSXXXXXXXXXX------XXXXXXXRNLAFKEH 114
            AE +   LND A+SS +++ Q  G                           +N  F  H
Sbjct: 82  RAEELRNVLNDAAASSSRNSSQGSGGGGWSSSDEEEEEADPMDQDEEGSGSGKNERFNAH 141

Query: 115 RKAHYDEFLKVKEHRQKASL-EDESDEDGDAEPSKGEKKCESSSLSDSVKEMD 166
           RKAHYDEF KVKE R   S  E+E +ED  A+ SK E    S       KE+D
Sbjct: 142 RKAHYDEFRKVKELRSSGSFYEEEEEEDDGAKGSKSETTTNSRHTKGGNKELD 194