Miyakogusa Predicted Gene

Lj0g3v0314249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0314249.1 Non Chatacterized Hit- tr|D7SP48|D7SP48_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,71.77,0,seg,NULL; HATPase_c_3,NULL; ATPase domain of HSP90
chaperone/DNA topoisomerase II/histidine kinase,A,CUFF.21216.1
         (344 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36280.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   434   e-122
AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV 1 |...   432   e-121
AT5G50780.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   310   9e-85
AT1G19100.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   305   2e-83
AT4G24970.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   302   2e-82
AT5G13130.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   281   5e-76
AT5G13130.2 | Symbols:  | Histidine kinase-, DNA gyrase B-, and ...   280   7e-76
AT4G36270.1 | Symbols:  | ATP binding | chr4:17161159-17164227 R...   238   4e-63

>AT4G36280.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein |
           chr4:17165513-17169277 REVERSE LENGTH=626
          Length = 626

 Score =  434 bits (1117), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 207/291 (71%), Positives = 242/291 (83%), Gaps = 4/291 (1%)

Query: 56  ASNSAP---VYSRSFWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAI 112
           A+  AP   +  RSFWKAGDY V P+V   +  G LEHARVHP+FLHSNATSHKWAFGAI
Sbjct: 39  AATMAPRETLECRSFWKAGDYFVIPNVVTPTAPGMLEHARVHPRFLHSNATSHKWAFGAI 98

Query: 113 AELVDNAVDEIQNGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGYSSKKS 172
           AEL+DNAVDEIQNGATFVK+DKI+ +KDNSP L FQDDGGGMDP  +RKCMSLGYSSKKS
Sbjct: 99  AELLDNAVDEIQNGATFVKIDKINIVKDNSPALVFQDDGGGMDPAGLRKCMSLGYSSKKS 158

Query: 173 KTTIGQYGNGFKTSTMRLGADAIVFSRAVNSSRATQSVGLLSYTFLRTTGQDDVIVPMID 232
            TTIGQYGNGFKTSTMRLGADAIVFSR+     +TQSVG+LSYTFLR TGQDDV VPMID
Sbjct: 159 NTTIGQYGNGFKTSTMRLGADAIVFSRSTRGGTSTQSVGILSYTFLRKTGQDDVTVPMID 218

Query: 233 FDISTHWAEPIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLN 292
            DIS    +PIIY S +DW+ NL+ +L WSPFS+++EL+ QF+D+G+HGTK++IYNLWLN
Sbjct: 219 IDISKERPQPIIYGSPEDWAANLEILLKWSPFSTEDELLQQFEDVGTHGTKVIIYNLWLN 278

Query: 293 DEGIYELSFDDDAEDIMLRDETNHGDEKKLSKKTVQLQSHISYRIRHSLRV 343
           DEGIYELSFDDD EDI LRDE+ + D K+L  K ++L+SHISY +R+SLR 
Sbjct: 279 DEGIYELSFDDDEEDIRLRDESVN-DGKRLHHKILELRSHISYHLRYSLRA 328


>AT4G36290.1 | Symbols: CRT1 | compromised recognition of TCV 1 |
           chr4:17169669-17173187 REVERSE LENGTH=635
          Length = 635

 Score =  432 bits (1111), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/290 (72%), Positives = 239/290 (82%), Gaps = 4/290 (1%)

Query: 56  ASNSAP---VYSRSFWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAI 112
           A+  AP   +  RSFWKAG+  V PS    +  G +EHARVHPKFLHSNATSHKWAFGAI
Sbjct: 47  AATVAPRETLECRSFWKAGENFVIPSSVTLTAIGMVEHARVHPKFLHSNATSHKWAFGAI 106

Query: 113 AELVDNAVDEIQNGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGYSSKKS 172
           AEL+DNAVDEIQNGAT VK+DKI+ +KDN+P L FQD+GGGMDPN IRKCMSLGYSSKKS
Sbjct: 107 AELLDNAVDEIQNGATVVKIDKINIVKDNTPALVFQDNGGGMDPNGIRKCMSLGYSSKKS 166

Query: 173 KTTIGQYGNGFKTSTMRLGADAIVFSRAVNSSRATQSVGLLSYTFLRTTGQDDVIVPMID 232
            TTIGQYGNGFKTSTMRLGADA+VFSR+    ++TQS+GLLSYTFLR TGQDDVIVPMID
Sbjct: 167 NTTIGQYGNGFKTSTMRLGADAMVFSRSTRGGKSTQSIGLLSYTFLRKTGQDDVIVPMID 226

Query: 233 FDISTHWAEPIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLN 292
           FDIS+   +PIIY S  DWS NL  +L WSPFS+  EL+ QF+DIG+HGTK++IYNLWLN
Sbjct: 227 FDISSDSPQPIIYGSPGDWSTNLNILLKWSPFSTMVELLQQFEDIGTHGTKVIIYNLWLN 286

Query: 293 DEGIYELSFDDDAEDIMLRDETNHGDEKKLSKKTVQLQSHISYRIRHSLR 342
           DEGIYELSFDDD  DI LRDE N  D K+L  KT++++SHISYR RHSLR
Sbjct: 287 DEGIYELSFDDDDVDIRLRDE-NAQDGKRLHAKTLEVRSHISYRYRHSLR 335


>AT5G50780.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein |
           chr5:20650269-20654948 FORWARD LENGTH=819
          Length = 819

 Score =  310 bits (794), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 153/299 (51%), Positives = 207/299 (69%), Gaps = 7/299 (2%)

Query: 48  PPLPKNTPASNSAPVYSRSFWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKW 107
           P  P N  A+ S+    + FWKAGDY            G  +H RVHPKFLHSNATSHKW
Sbjct: 110 PATPCNVVAAPSSWGSCKQFWKAGDYEGTSGGDWEVSAGGFDHVRVHPKFLHSNATSHKW 169

Query: 108 AFGAIAELVDNAVDEIQNGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGY 167
           + GA AEL+DNA+DE+++GATFV VD I N KD S ++  +D+GGGM+P  +R CMSLGY
Sbjct: 170 SLGAFAELLDNALDEVRSGATFVNVDMIQNRKDGSKMILIEDNGGGMNPEKMRHCMSLGY 229

Query: 168 SSK-KSKTTIGQYGNGFKTSTMRLGADAIVFSRAV--NSSRATQSVGLLSYTFLRTTGQD 224
           S+K K   TIGQYGNGFKTSTMRLGAD IVFSR +  +   +TQS+GLLSYTFL++TG++
Sbjct: 230 SAKSKLADTIGQYGNGFKTSTMRLGADVIVFSRCLGKDGKSSTQSIGLLSYTFLKSTGKE 289

Query: 225 DVIVPMIDFDIS-THWAEPIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTK 283
           D++VPM+D++   + W  PI  SS  DW  N++T++ WSP++++EEL+ QF+ +  HGT+
Sbjct: 290 DIVVPMLDYERRDSEWC-PITRSSVSDWEKNVETVVQWSPYATEEELLCQFNLMKKHGTR 348

Query: 284 ILIYNLWLNDEGIYELSFDDDAEDIMLRDETNHGDEKKLSKKTVQLQSHISYRIRHSLR 342
           I+IYNLW +DEG+ EL FD D  DI LR          ++ +    + +++Y  +HSLR
Sbjct: 349 IIIYNLWEDDEGMLELDFDTDPHDIQLRGVNRDDKNIVMASQFPNSRHYLTY--KHSLR 405


>AT1G19100.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein | chr1:6595560-6601159
           FORWARD LENGTH=663
          Length = 663

 Score =  305 bits (782), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 154/284 (54%), Positives = 192/284 (67%), Gaps = 9/284 (3%)

Query: 60  APVYSRSFWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAIAELVDNA 119
           APV  R FWKAG Y    S K     G   +  VHP FLHSNATSHKWAFGA+AEL+DNA
Sbjct: 83  APV-CRQFWKAGSYNDELSSKSQQPNGK-NYLHVHPMFLHSNATSHKWAFGAVAELLDNA 140

Query: 120 VDEIQNGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGYSSKKSKTTIGQY 179
           VDEIQNGATFV VDK  N +D +  L  QDDGGGMDP ++R CM  G+S KKS + IG+Y
Sbjct: 141 VDEIQNGATFVIVDKTTNPRDGATALLIQDDGGGMDPQAMRHCMGFGFSDKKSDSAIGRY 200

Query: 180 GNGFKTSTMRLGADAIVFSRAVNSSRATQSVGLLSYTFLRTTGQDDVIVPMIDFDISTHW 239
           GNGFKTSTMRLGAD IVFSR   +   TQS+GLLSYT+L  TG D ++VP++D++ +   
Sbjct: 201 GNGFKTSTMRLGADVIVFSRHSKNQTLTQSIGLLSYTYLTRTGHDRIVVPILDYEFNASA 260

Query: 240 AEPIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLNDEGIYEL 299
            E      ++ +  +L  +L+WSPFS++ EL+ QFDD+G HGTK++IYN+WLN +   EL
Sbjct: 261 GEFKTLQDREHFISSLSILLEWSPFSTEAELLQQFDDVGPHGTKVIIYNMWLNSDAKLEL 320

Query: 300 SFDDDAEDIMLRDETNHGDEKKLSKKTVQLQSHISYRIRHSLRV 343
            FD  AEDI++      G  KK   K V    HI+ R  +SLRV
Sbjct: 321 DFDSVAEDILIE-----GSIKKTGSKIV--NDHIASRFSYSLRV 357


>AT4G24970.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein |
           chr4:12831125-12835449 FORWARD LENGTH=707
          Length = 707

 Score =  302 bits (773), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 151/281 (53%), Positives = 197/281 (70%), Gaps = 5/281 (1%)

Query: 65  RSFWKAGDYVVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAIAELVDNAVDEIQ 124
           + FWKAGDY            G  +H RVHPKFLHSNATSHKWA GA AEL+DNA+DE+ 
Sbjct: 136 KQFWKAGDYEGAAGDNWDLSSGGFDHVRVHPKFLHSNATSHKWALGAFAELLDNALDEVA 195

Query: 125 NGATFVKVDKIDNMKDNSPVLCFQDDGGGMDPNSIRKCMSLGYSSK-KSKTTIGQYGNGF 183
           +GAT+VKVD ++N K  + +L  +D+GGGMDP  +R+CMSLGYS+K K   TIGQYGNGF
Sbjct: 196 SGATYVKVDMLENNKGGNRMLLIEDNGGGMDPEKMRQCMSLGYSAKSKLANTIGQYGNGF 255

Query: 184 KTSTMRLGADAIVFSRA--VNSSRATQSVGLLSYTFLRTTGQDDVIVPMIDFDISTHWAE 241
           KTSTMRLGAD IVFSR    +   +TQS+GLLSYTFLR+TG++D++VPM+D++       
Sbjct: 256 KTSTMRLGADVIVFSRCPGKDGKSSTQSIGLLSYTFLRSTGKEDIVVPMLDYERRDPEWS 315

Query: 242 PIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLNDEGIYELSF 301
            II SS  DW  N++TI+ WSPFSS+E+L+ QFD +   GT+I+IYNLW +D+G+ EL F
Sbjct: 316 KIIRSSTRDWDKNVETIIQWSPFSSEEDLLHQFDLMKDRGTRIIIYNLWEDDQGMLELDF 375

Query: 302 DDDAEDIMLRDETNHGDEKKLSKKTVQLQSHISYRIRHSLR 342
           D D  DI LR         K++ +    +  ++Y  +HSLR
Sbjct: 376 DADPYDIQLRGVNREERNIKMASQFPNSRHFLTY--KHSLR 414


>AT5G13130.1 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein | chr5:4166755-4170324
           FORWARD LENGTH=708
          Length = 708

 Score =  281 bits (719), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 196/289 (67%), Gaps = 12/289 (4%)

Query: 60  APVYSRSFWKAGDY-VVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAIAELVDN 118
            P  SR FWKAGD     P     S+   +   RVHP+FLH+NATSHKWA GA+AEL+DN
Sbjct: 71  TPKLSRQFWKAGDDDEAAPVPLYCSNDAAV---RVHPQFLHANATSHKWALGALAELLDN 127

Query: 119 AVDEIQNGATFVKVDKIDNMKD-NSPVLCFQDDGGGMDPNSIRKCMSLGYSSKKSKTT-I 176
           ++DE+ NGAT+V VD   N +D  S +L  +D+GGGM+P++ R+C+SLGYS K++    +
Sbjct: 128 SLDEVSNGATYVHVDSTINKRDGKSSILIVEDNGGGMNPSTFRECLSLGYSRKRNMANRV 187

Query: 177 GQYGNGFKTSTMRLGADAIVFSRA--VNSSRATQSVGLLSYTFLRTTGQDDVIVPMIDFD 234
           GQYGNGFKTSTMRLGADAIVFSR+  +N +  TQS+G+LSYTFL  T + + IVP +D++
Sbjct: 188 GQYGNGFKTSTMRLGADAIVFSRSRGINGNNPTQSIGMLSYTFLYETRKCEAIVPTVDYE 247

Query: 235 -ISTHWAEPIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLND 293
            +   W E I+Y+S ++W DNL+TIL WSP+ S+++L+ QF+ +   GT+I+IYNLW +D
Sbjct: 248 LVDNKWKE-IVYNSTNEWLDNLETILRWSPYLSQQDLLDQFNHLEEQGTRIVIYNLWEDD 306

Query: 294 EGIYELSFDDDAEDIMLRDETNHGDEKKLSKKTVQLQSHISYRIRHSLR 342
           EG  EL FD D  DI LR      DEK +        S      RHSLR
Sbjct: 307 EGKMELDFDTDPHDIQLRGVNR--DEKNIDMAKTYPNSRHFLTYRHSLR 353


>AT5G13130.2 | Symbols:  | Histidine kinase-, DNA gyrase B-, and
           HSP90-like ATPase family protein | chr5:4166755-4170324
           FORWARD LENGTH=696
          Length = 696

 Score =  280 bits (717), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 196/289 (67%), Gaps = 12/289 (4%)

Query: 60  APVYSRSFWKAGDY-VVGPSVKPASDQGYLEHARVHPKFLHSNATSHKWAFGAIAELVDN 118
            P  SR FWKAGD     P     S+   +   RVHP+FLH+NATSHKWA GA+AEL+DN
Sbjct: 71  TPKLSRQFWKAGDDDEAAPVPLYCSNDAAV---RVHPQFLHANATSHKWALGALAELLDN 127

Query: 119 AVDEIQNGATFVKVDKIDNMKD-NSPVLCFQDDGGGMDPNSIRKCMSLGYSSKKSKTT-I 176
           ++DE+ NGAT+V VD   N +D  S +L  +D+GGGM+P++ R+C+SLGYS K++    +
Sbjct: 128 SLDEVSNGATYVHVDSTINKRDGKSSILIVEDNGGGMNPSTFRECLSLGYSRKRNMANRV 187

Query: 177 GQYGNGFKTSTMRLGADAIVFSRA--VNSSRATQSVGLLSYTFLRTTGQDDVIVPMIDFD 234
           GQYGNGFKTSTMRLGADAIVFSR+  +N +  TQS+G+LSYTFL  T + + IVP +D++
Sbjct: 188 GQYGNGFKTSTMRLGADAIVFSRSRGINGNNPTQSIGMLSYTFLYETRKCEAIVPTVDYE 247

Query: 235 -ISTHWAEPIIYSSQDDWSDNLKTILDWSPFSSKEELMLQFDDIGSHGTKILIYNLWLND 293
            +   W E I+Y+S ++W DNL+TIL WSP+ S+++L+ QF+ +   GT+I+IYNLW +D
Sbjct: 248 LVDNKWKE-IVYNSTNEWLDNLETILRWSPYLSQQDLLDQFNHLEEQGTRIVIYNLWEDD 306

Query: 294 EGIYELSFDDDAEDIMLRDETNHGDEKKLSKKTVQLQSHISYRIRHSLR 342
           EG  EL FD D  DI LR      DEK +        S      RHSLR
Sbjct: 307 EGKMELDFDTDPHDIQLRGVNR--DEKNIDMAKTYPNSRHFLTYRHSLR 353


>AT4G36270.1 | Symbols:  | ATP binding | chr4:17161159-17164227
           REVERSE LENGTH=486
          Length = 486

 Score =  238 bits (607), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 121/205 (59%), Positives = 146/205 (71%), Gaps = 22/205 (10%)

Query: 154 MDPNSIRKCMSLGYSSKKSKTTIGQYGNGFKTSTMRLGADAIVFSRAVNSSRATQSVGLL 213
           MDP+ +RKCMSLGYSSKKS TTIGQYGNGFKTSTMRLGAD IVF+R+    ++TQSVGLL
Sbjct: 1   MDPDGLRKCMSLGYSSKKSNTTIGQYGNGFKTSTMRLGADDIVFTRSTRGGKSTQSVGLL 60

Query: 214 SYTFLRTTGQDDVIVPM------IDFDISTHWAEPIIYSSQDDWSDNLKTILDWSPFSSK 267
           SYTFLR TGQDDV+VPM      ID D S    +PIIY S +DW+ +L+ IL WSPFS++
Sbjct: 61  SYTFLRKTGQDDVVVPMIRYAMQIDIDTSKERPQPIIYGSAEDWAASLEIILKWSPFSTE 120

Query: 268 EEL---------------MLQFDDIGSHGTKILIYNLWLNDEGIYELSFDDDAEDIMLRD 312
            EL                 Q +DIG+HGTK++IYNLWLNDEGIYELSF DD EDI LRD
Sbjct: 121 GELWQQRSVLLTFLFPSSTHQLEDIGTHGTKVIIYNLWLNDEGIYELSFHDDNEDIRLRD 180

Query: 313 ETNHGDEKKLSKKTVQLQSHISYRI 337
           E+ H D K+     + L+   +++I
Sbjct: 181 ESVH-DSKRAYASMLYLKRFNNFKI 204