Miyakogusa Predicted Gene

Lj0g3v0314209.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0314209.2 Non Chatacterized Hit- tr|H2SVR7|H2SVR7_TAKRU
Uncharacterized protein OS=Takifugu rubripes GN=GLE1
P,29.71,8e-19,SUBFAMILY NOT NAMED,NULL; GLE-1-RELATED,GLE1-like;
GLE1,GLE1-like,CUFF.21213.2
         (263 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13120.1 | Symbols: emb1745 | embryo defective 1745 | chr1:44...   214   6e-56

>AT1G13120.1 | Symbols: emb1745 | embryo defective 1745 |
           chr1:4469334-4472775 REVERSE LENGTH=611
          Length = 611

 Score =  214 bits (544), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 104/243 (42%), Positives = 160/243 (65%), Gaps = 30/243 (12%)

Query: 14  GKRDNLLGCARSKASELIKLLNDPQYPQSISVETFAKKVISNSKAPGSAPFASAYVIVLV 73
           G +D++ G    K ++++K+  DP+ P SIS+  FAKK+++  + P   PFA +YVIV +
Sbjct: 366 GTKDSVSG----KINDIVKIFKDPRCPVSISIAAFAKKMVTTKEKPN--PFACSYVIVYI 419

Query: 74  TSQVPHAMDILLAELHRVCPYTVPKHMVYKKSTFHSREAYLKSIGYWEENGKMENTEDYL 133
            SQ P  MDILLAE H+ C YTVPKH+V  +S + S                     D  
Sbjct: 420 NSQFPQVMDILLAEFHKACIYTVPKHIVNSQSAWDS---------------------DAY 458

Query: 134 QRLESYVKMYAALVQTE--VPKVQNLHGLQHGWAWLSRFFNALSAHQYTAVSLDAFLRMA 191
           +RL+S +++Y ALVQT+  V    N+HG++HGWAWL+RF N + A++ TA +L++FL+ A
Sbjct: 459 ERLDSIMRLYGALVQTDIRVGNATNVHGIEHGWAWLARFLNKIPANRATATALNSFLQTA 518

Query: 192 GFALFRRYKSQFLKMLNVISENFLVDIKS-LNAPELRKTVAEIQTYIEDKMFLQEPEGRS 250
           GF L +RYKSQFLK++NV+ E+FL  +++  +  +L   +AEI  Y++D+M+L+EPEGR+
Sbjct: 519 GFGLHQRYKSQFLKVVNVVREHFLQKLRAKKDTSDLLVIIAEITAYLDDRMYLKEPEGRA 578

Query: 251 LQT 253
           ++T
Sbjct: 579 MKT 581