Miyakogusa Predicted Gene
- Lj0g3v0312989.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0312989.1 Non Chatacterized Hit- tr|I1MMY0|I1MMY0_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,92.43,0,no
description,Isopropylmalate dehydrogenase-like domain; seg,NULL;
ISOCITRATE DEHYDROGNENASE,NULL; ,CUFF.21154.1
(373 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35260.1 | Symbols: IDH1, IDH-I | isocitrate dehydrogenase 1 ... 602 e-172
AT4G35650.1 | Symbols: IDH-III | isocitrate dehydrogenase III | ... 578 e-165
AT2G17130.1 | Symbols: IDH2, IDH-II | isocitrate dehydrogenase s... 572 e-163
AT2G17130.2 | Symbols: IDH2, IDH-II | isocitrate dehydrogenase s... 559 e-159
AT5G03290.1 | Symbols: IDH-V | isocitrate dehydrogenase V | chr5... 313 1e-85
AT3G09810.1 | Symbols: IDH-VI | isocitrate dehydrogenase VI | ch... 298 3e-81
AT1G32480.1 | Symbols: IDH-IV | isocitrate dehydrogenase IV | ch... 278 5e-75
AT1G80560.1 | Symbols: ATIMD2, IMD2 | isopropylmalate dehydrogen... 102 5e-22
AT5G14200.1 | Symbols: ATIMD1, IMD1 | isopropylmalate dehydrogen... 99 5e-21
AT5G14200.3 | Symbols: | isopropylmalate dehydrogenase 1 | chr5... 99 7e-21
AT1G31180.1 | Symbols: ATIMD3, IMD3, IPMDH1 | isopropylmalate de... 94 2e-19
AT5G14200.2 | Symbols: | isopropylmalate dehydrogenase 1 | chr5... 69 6e-12
>AT4G35260.1 | Symbols: IDH1, IDH-I | isocitrate dehydrogenase 1 |
chr4:16774494-16776233 REVERSE LENGTH=367
Length = 367
Score = 602 bits (1551), Expect = e-172, Method: Compositional matrix adjust.
Identities = 300/371 (80%), Positives = 319/371 (85%), Gaps = 5/371 (1%)
Query: 3 TRRSAPLLKHLLTRSKPGFGSTVPASQRWVTYMHRPGDGSPRAVTLIPGDGIGPLVTGAV 62
+RRS LLK+L R+ G G R VTYM RPGDG+PRAVTLIPGDGIGPLVT AV
Sbjct: 2 SRRSLTLLKNL-ARNANGSG----IQTRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTNAV 56
Query: 63 EQVMEAMHAPVYFEKFDVHGTMKAVPAEVLDSIRKNKVCLKGGLVTPMGGGVSSLNVQLR 122
EQVMEAMHAP++FEK+DVHG M VP EV++SIRKNKVCLKGGL TP+GGGVSSLNVQLR
Sbjct: 57 EQVMEAMHAPIFFEKYDVHGEMSRVPPEVMESIRKNKVCLKGGLKTPVGGGVSSLNVQLR 116
Query: 123 KELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFC 182
KELDL+ASLVNCFNLPGLPTRH+NVDIVVIRENTEGEY+GLEHEVVPGVVESLKVITKFC
Sbjct: 117 KELDLFASLVNCFNLPGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFC 176
Query: 183 SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGIKYNEIIVDNC 242
SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYP I YNEIIVDNC
Sbjct: 177 SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPSITYNEIIVDNC 236
Query: 243 CMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXAEHAVFEQGASAGNVG 302
CMQLV+KPEQFDVMVTPNLYGNLV A+HAVFEQGASAGNVG
Sbjct: 237 CMQLVAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVG 296
Query: 303 SDKILEEKIANPVALLLSSAMMLRHLQFPAFADRLETAVEGVILEGKYRTKDLGGTSTTQ 362
DKI+ E ANPVALLLSSAMMLRHLQFP+FADRLETAV+ VI EGK RTKDLGGTSTTQ
Sbjct: 297 KDKIVLENKANPVALLLSSAMMLRHLQFPSFADRLETAVKKVIAEGKCRTKDLGGTSTTQ 356
Query: 363 EVVDAVVAALD 373
EVVDAV+A LD
Sbjct: 357 EVVDAVIAKLD 367
>AT4G35650.1 | Symbols: IDH-III | isocitrate dehydrogenase III |
chr4:16908584-16909973 FORWARD LENGTH=368
Length = 368
Score = 578 bits (1490), Expect = e-165, Method: Compositional matrix adjust.
Identities = 282/370 (76%), Positives = 313/370 (84%), Gaps = 4/370 (1%)
Query: 4 RRSAPLLKHLLTRSKPGFGSTVPASQRWVTYMHRPGDGSPRAVTLIPGDGIGPLVTGAVE 63
RRS + LL F S R +TYM RPGDG+PR VTLIPGDGIGPLVTGAVE
Sbjct: 3 RRSVSIFNRLLANPPSPFTSL----SRSITYMPRPGDGAPRTVTLIPGDGIGPLVTGAVE 58
Query: 64 QVMEAMHAPVYFEKFDVHGTMKAVPAEVLDSIRKNKVCLKGGLVTPMGGGVSSLNVQLRK 123
QVMEAMHAPV+FE+++V G M+ VP EV++S+++NKVCLKGGL TP+GGGVSSLN+QLRK
Sbjct: 59 QVMEAMHAPVHFERYEVLGNMRKVPEEVIESVKRNKVCLKGGLATPVGGGVSSLNMQLRK 118
Query: 124 ELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCS 183
ELD++ASLVNC N+PGL TRH+NVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCS
Sbjct: 119 ELDIFASLVNCINVPGLVTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCS 178
Query: 184 ERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGIKYNEIIVDNCC 243
ERIA+YAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAK Y GI YNEIIVDNCC
Sbjct: 179 ERIARYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKHYSGITYNEIIVDNCC 238
Query: 244 MQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXAEHAVFEQGASAGNVGS 303
MQLV+KPEQFDVMVTPNLYGNL+ AEHA+FEQGASAGNVG+
Sbjct: 239 MQLVAKPEQFDVMVTPNLYGNLIANTAAGIAGGTGVMPGGNVGAEHAIFEQGASAGNVGN 298
Query: 304 DKILEEKIANPVALLLSSAMMLRHLQFPAFADRLETAVEGVILEGKYRTKDLGGTSTTQE 363
DK++E+K ANPVALLLSSAMMLRHL+FP FADRLETAV+ VI EGKYRTKDLGG TTQE
Sbjct: 299 DKMVEQKKANPVALLLSSAMMLRHLRFPTFADRLETAVKQVIKEGKYRTKDLGGDCTTQE 358
Query: 364 VVDAVVAALD 373
VVDAV+AAL+
Sbjct: 359 VVDAVIAALE 368
>AT2G17130.1 | Symbols: IDH2, IDH-II | isocitrate dehydrogenase
subunit 2 | chr2:7461062-7462466 REVERSE LENGTH=367
Length = 367
Score = 572 bits (1474), Expect = e-163, Method: Compositional matrix adjust.
Identities = 285/371 (76%), Positives = 313/371 (84%), Gaps = 5/371 (1%)
Query: 3 TRRSAPLLKHLLTRSKPGFGSTVPASQRWVTYMHRPGDGSPRAVTLIPGDGIGPLVTGAV 62
+R+S LLK+L + + GS + R VTYM RPGDG PR VTLIPGDG+GPLVT AV
Sbjct: 2 SRQSFSLLKNLRSIAS---GSKI--QTRSVTYMPRPGDGKPRPVTLIPGDGVGPLVTNAV 56
Query: 63 EQVMEAMHAPVYFEKFDVHGTMKAVPAEVLDSIRKNKVCLKGGLVTPMGGGVSSLNVQLR 122
+QVMEAMHAPVYFE F+VHG MK++P +L+SI+KNKVCLKGGL TP+GGGVSSLNV LR
Sbjct: 57 QQVMEAMHAPVYFEPFEVHGDMKSLPEGLLESIKKNKVCLKGGLKTPVGGGVSSLNVNLR 116
Query: 123 KELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFC 182
KELDL+ASLVNCFNLPGL +RH+NVDIVVIRENTEGEY+GLEHEVVPGVVESLKVITKFC
Sbjct: 117 KELDLFASLVNCFNLPGLASRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFC 176
Query: 183 SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGIKYNEIIVDNC 242
SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESC+EVAKKYP I YNEIIVDNC
Sbjct: 177 SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCQEVAKKYPSIAYNEIIVDNC 236
Query: 243 CMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXAEHAVFEQGASAGNVG 302
CMQLV++PEQFDVMVTPNLYGNLV AE+AVFEQGASAGNVG
Sbjct: 237 CMQLVARPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEYAVFEQGASAGNVG 296
Query: 303 SDKILEEKIANPVALLLSSAMMLRHLQFPAFADRLETAVEGVILEGKYRTKDLGGTSTTQ 362
D E+K ANPVALLLSSAMMLRHLQFP+FADRLETAV+ VI EG RT+DLGG STTQ
Sbjct: 297 KDTTEEQKNANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQ 356
Query: 363 EVVDAVVAALD 373
EVVDAV+A LD
Sbjct: 357 EVVDAVIANLD 367
>AT2G17130.2 | Symbols: IDH2, IDH-II | isocitrate dehydrogenase
subunit 2 | chr2:7461062-7462466 REVERSE LENGTH=363
Length = 363
Score = 559 bits (1441), Expect = e-159, Method: Compositional matrix adjust.
Identities = 281/371 (75%), Positives = 309/371 (83%), Gaps = 9/371 (2%)
Query: 3 TRRSAPLLKHLLTRSKPGFGSTVPASQRWVTYMHRPGDGSPRAVTLIPGDGIGPLVTGAV 62
+R+S LLK+L + + GS + R VTYM RPGDG PR VTLIPGDG+GPLVT AV
Sbjct: 2 SRQSFSLLKNLRSIAS---GSKI--QTRSVTYMPRPGDGKPRPVTLIPGDGVGPLVTNAV 56
Query: 63 EQVMEAMHAPVYFEKFDVHGTMKAVPAEVLDSIRKNKVCLKGGLVTPMGGGVSSLNVQLR 122
+QVMEAMHAPVYFE F+VHG MK++P +L+SI+KNKVCLKGGL TP+GGGVSSLNV LR
Sbjct: 57 QQVMEAMHAPVYFEPFEVHGDMKSLPEGLLESIKKNKVCLKGGLKTPVGGGVSSLNVNLR 116
Query: 123 KELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFC 182
KELDL+ASLVNCFNLPGL +RH+NVDIVVIRENTEGEY+GLEHEVVPGVVESL KFC
Sbjct: 117 KELDLFASLVNCFNLPGLASRHENVDIVVIRENTEGEYAGLEHEVVPGVVESL----KFC 172
Query: 183 SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGIKYNEIIVDNC 242
SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESC+EVAKKYP I YNEIIVDNC
Sbjct: 173 SERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCQEVAKKYPSIAYNEIIVDNC 232
Query: 243 CMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXAEHAVFEQGASAGNVG 302
CMQLV++PEQFDVMVTPNLYGNLV AE+AVFEQGASAGNVG
Sbjct: 233 CMQLVARPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEYAVFEQGASAGNVG 292
Query: 303 SDKILEEKIANPVALLLSSAMMLRHLQFPAFADRLETAVEGVILEGKYRTKDLGGTSTTQ 362
D E+K ANPVALLLSSAMMLRHLQFP+FADRLETAV+ VI EG RT+DLGG STTQ
Sbjct: 293 KDTTEEQKNANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGNCRTEDLGGNSTTQ 352
Query: 363 EVVDAVVAALD 373
EVVDAV+A LD
Sbjct: 353 EVVDAVIANLD 363
>AT5G03290.1 | Symbols: IDH-V | isocitrate dehydrogenase V |
chr5:794043-795939 FORWARD LENGTH=374
Length = 374
Score = 313 bits (802), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 162/336 (48%), Positives = 219/336 (65%), Gaps = 8/336 (2%)
Query: 42 SPRAVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKFDVHG-----TMKAVPAEVLDSIR 96
+P TL PGDGIGP + +V++V P+ +E+ V T + E L+S+R
Sbjct: 42 TPITATLFPGDGIGPEIAESVKKVFTTAGVPIEWEEHYVGTEIDPRTQSFLTWESLESVR 101
Query: 97 KNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENT 156
+NKV LKG + TP+G G SLN+ LRKEL+LYA++ C++LPG TR+D+VD++ IRENT
Sbjct: 102 RNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENT 161
Query: 157 EGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADG 216
EGEYSGLEH+VV GVVESLK+IT+ S R+A+YAF YA + R++V+A+HKANIM+ DG
Sbjct: 162 EGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFLYAKTHGRERVSAIHKANIMQKTDG 221
Query: 217 LFLESCREVAKKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXX 276
LFL+ CREVA+KYP I Y E+++DNCCM LV P FDV+V PNLYG+++
Sbjct: 222 LFLKCCREVAEKYPEITYEEVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGG 281
Query: 277 XXXXXXXXXXAEHAVFEQGASAGNVGSDKILEEKIANPVALLLSSAMMLRHLQFPAFADR 336
+ A A + + I + +ANP ALLLS MMLRHL+F A++
Sbjct: 282 LGLTPSCNIGEDGVAL---AEAVHGSAPDIAGKNLANPTALLLSGVMMLRHLKFNEQAEQ 338
Query: 337 LETAVEGVILEGKYRTKDLGGTSTTQEVVDAVVAAL 372
+ +A+ I EGKYRT DLGG+STT E A+ L
Sbjct: 339 IHSAIINTIAEGKYRTADLGGSSTTTEFTKAICDHL 374
>AT3G09810.1 | Symbols: IDH-VI | isocitrate dehydrogenase VI |
chr3:3008753-3011070 FORWARD LENGTH=374
Length = 374
Score = 298 bits (764), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 158/332 (47%), Positives = 212/332 (63%), Gaps = 8/332 (2%)
Query: 42 SPRAVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKFDVHG-----TMKAVPAEVLDSIR 96
+P TL PGDGIGP + +V+QV A + +++ V T + + L S+
Sbjct: 42 TPIKATLFPGDGIGPEIAESVKQVFTAADVVIDWDEQFVGTEVDPRTNSFLTWDNLQSVL 101
Query: 97 KNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENT 156
KNKV LKG + TP+G G SLN+ LRKEL+LYA++ C++LPG TR+D+VD++ IRENT
Sbjct: 102 KNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENT 161
Query: 157 EGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADG 216
EGEYSGLEH+VV GVVESLK+IT+ S R+A+YAF YA + RKKV+A+HKANIM+ DG
Sbjct: 162 EGEYSGLEHQVVKGVVESLKIITRKASMRVAEYAFLYAKTHGRKKVSAIHKANIMQKTDG 221
Query: 217 LFLESCREVAKKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXX 276
LFL+ C EVA KYP I Y ++++DNCCM LV P FDV+V PNLYG+++
Sbjct: 222 LFLQCCDEVAAKYPEIYYEKVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGG 281
Query: 277 XXXXXXXXXXAEHAVFEQGASAGNVGSDKILEEKIANPVALLLSSAMMLRHLQFPAFADR 336
+ A A + + I +ANP ALLLS MMLRHL+ A++
Sbjct: 282 LGLTPSMNIGEDGIAL---AEAVHGSAPDIAGMNLANPTALLLSGVMMLRHLKLNKQAEQ 338
Query: 337 LETAVEGVILEGKYRTKDLGGTSTTQEVVDAV 368
+ +A+ I EGKYRT DLGG+STT + A+
Sbjct: 339 IHSAIINTIAEGKYRTADLGGSSTTTDFTKAI 370
>AT1G32480.1 | Symbols: IDH-IV | isocitrate dehydrogenase IV |
chr1:11741083-11741727 FORWARD LENGTH=214
Length = 214
Score = 278 bits (711), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/224 (63%), Positives = 169/224 (75%), Gaps = 15/224 (6%)
Query: 43 PRAVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKFDVHG-TMKAVPAEVLDSIRKNKVC 101
PR VT+I + VT AV QVM+AM APVYFE + + G M + EV+DSIRKNKVC
Sbjct: 2 PRPVTVIDSN-----VTNAVHQVMDAMQAPVYFETYIIKGKNMNHLTWEVVDSIRKNKVC 56
Query: 102 LKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYS 161
L G + + GG RKELDL+ASLV+CFNL G P+RH+NVDIVVIRENTEGEY+
Sbjct: 57 LNGRVNNSLCGGA-------RKELDLFASLVDCFNLNGQPSRHENVDIVVIRENTEGEYA 109
Query: 162 GLEHEVVPGVVESLKV-ITKFCSERIAKYAFEYAYLNNRKKVTAVH-KANIMKLADGLFL 219
G EHEVVPGV+ES +V +TKF S+RIAKYAFEYA+ + RKKVTAVH KLAD FL
Sbjct: 110 GREHEVVPGVIESFQVTMTKFWSDRIAKYAFEYAHFSKRKKVTAVHNNGKYEKLADAFFL 169
Query: 220 ESCREVAKKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYG 263
ESC+EVAK YP I YNEI ++NCC+QLV KPE+FDV+VTPNLYG
Sbjct: 170 ESCQEVAKMYPNITYNEIGINNCCLQLVEKPERFDVIVTPNLYG 213
>AT1G80560.1 | Symbols: ATIMD2, IMD2 | isopropylmalate dehydrogenase
2 | chr1:30287833-30290126 FORWARD LENGTH=405
Length = 405
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 54/353 (15%)
Query: 46 VTLIPGDGIGPLVTGAVEQVMEAMHA-----------PVYFEKFDVHGTMKAVPAEVLDS 94
+TL+PGDGIGP V + V++ + P+ D+ G +P E + +
Sbjct: 45 ITLLPGDGIGPEVVSIAKNVLQQAGSLEGVEFNFREMPIGGAALDLVGV--PLPEETISA 102
Query: 95 IRKNKVCLKGGLVTPMGGGVSSLN-----------VQLRKELDLYASLVNCFNLPGLPTR 143
+++ L G + GG N +Q+R L ++A+L LP L
Sbjct: 103 AKESDAVLLGAI-----GGYKWDNNEKHLRPEKGLLQIRAALKVFANLRPATVLPQLVDA 157
Query: 144 H-------DNVDIVVIRENTEGEYSG-----LEHEVVPGVVESLKVITKFCSERIAKYAF 191
+ VD++V+RE T G Y G +E V + +V +RIA+ AF
Sbjct: 158 STLKREVAEGVDLMVVRELTGGIYFGEPRGIKTNENGEEVGFNTEVYAAHEIDRIARVAF 217
Query: 192 EYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGIKYNEIIVDNCCMQLVSKPE 251
E A R K+ +V KAN+++ A L+ + +A +YP ++ + + VDN MQLV P+
Sbjct: 218 ETAR-KRRGKLCSVDKANVLE-ASILWRKRVTALASEYPDVELSHMYVDNAAMQLVRDPK 275
Query: 252 QFDVMVTPNLYGNLVXXXXXXXXXXXXXX-XXXXXXAEHAVFE--QGASAGNVGSDKILE 308
QFD +VT N++G+++ + +FE G++ G DK
Sbjct: 276 QFDTIVTNNIFGDILSDEASMITGSIGMLPSASLSDSGPGLFEPIHGSAPDIAGQDK--- 332
Query: 309 EKIANPVALLLSSAMMLRH-LQFPAFADRLETAVEGVILEGKYRTKDLGGTST 360
ANP+A +LS+AM+L++ L A R+E AV V L +RT D+ T
Sbjct: 333 ---ANPLATILSAAMLLKYGLGEEKAAKRIEDAVL-VALNNGFRTGDIYSAGT 381
>AT5G14200.1 | Symbols: ATIMD1, IMD1 | isopropylmalate dehydrogenase
1 | chr5:4576220-4578111 FORWARD LENGTH=409
Length = 409
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 172/378 (45%), Gaps = 56/378 (14%)
Query: 19 PGFGSTVPASQRWVTYMHRPGDGSPRA----VTLIPGDGIGPLVTGAVEQVMEAMHA--- 71
PG S++ Q Y R SP + L+PGDGIGP V + V++ +
Sbjct: 18 PGKYSSLTDHQFRAPYRIRCAAASPGKKRYNIALLPGDGIGPEVISVAKNVLQKAGSLEG 77
Query: 72 --------PVYFEKFDVHGTMKAVPAEVLDSIRKNKVCLKGGLVTPMGGGVSSLNVQ--- 120
PV D+ G +P E + + + L G + GG N +
Sbjct: 78 LEFDFKEMPVGGAALDLVGV--PLPEETFTAAKLSDAILLGAI----GGYKWDKNEKHLR 131
Query: 121 -------LRKELDLYASLVNCFNLPGLPTRH-------DNVDIVVIRENTEGEYSGLEHE 166
LR++L ++A+L LP L + VD++++RE T G Y G
Sbjct: 132 PEMALFYLRRDLKVFANLRPATVLPQLVDASTLKKEVAEGVDMMIVRELTGGIYFGEPRG 191
Query: 167 V-VPGVVESLKVITKFCS----ERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLES 221
+ + E + V T+ + +RIA+ AFE A R K+ +V KAN++ A L+ +
Sbjct: 192 ITINENGEEVGVSTEIYAAHEIDRIARVAFETAR-KRRGKLCSVDKANVLD-ASILWRKR 249
Query: 222 CREVAKKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXX- 280
+A +YP ++ + + VDN MQL+ P+QFD +VT N++G+++
Sbjct: 250 VTALASEYPDVELSHMYVDNAAMQLIRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLP 309
Query: 281 XXXXXXAEHAVFE--QGASAGNVGSDKILEEKIANPVALLLSSAMMLRH-LQFPAFADRL 337
+ +FE G++ G DK ANP+A +LS+AM+L++ L A R+
Sbjct: 310 SASLGESGPGLFEPIHGSAPDIAGQDK------ANPLATILSAAMLLKYGLGEEKAAKRI 363
Query: 338 ETAVEGVILEGKYRTKDL 355
E AV + +G +RT D+
Sbjct: 364 EDAVVDALNKG-FRTGDI 380
>AT5G14200.3 | Symbols: | isopropylmalate dehydrogenase 1 |
chr5:4576220-4577962 FORWARD LENGTH=388
Length = 388
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 169/378 (44%), Gaps = 56/378 (14%)
Query: 19 PGFGSTVPASQRWVTYMHRPGDGSPRA----VTLIPGDGIGPLVTGAVEQVMEAMHA--- 71
PG S++ Q Y R SP + L+PGDGIGP V + V++ +
Sbjct: 18 PGKYSSLTDHQFRAPYRIRCAAASPGKKRYNIALLPGDGIGPEVISVAKNVLQKAGSLEG 77
Query: 72 --------PVYFEKFDVHGTMKAVPAEVLDSIRKNKVCLKGGLVTPMGGGVSSLNVQ--- 120
PV D+ G +P E + + + L G + GG N +
Sbjct: 78 LEFDFKEMPVGGAALDLVGV--PLPEETFTAAKLSDAILLGAI----GGYKWDKNEKHLR 131
Query: 121 -------LRKELDLYASLVNCFNLPGLPTRH-------DNVDIVVIRENTEGEYSGLEHE 166
LR++L ++A+L LP L + VD++++RE T G Y G
Sbjct: 132 PEMALFYLRRDLKVFANLRPATVLPQLVDASTLKKEVAEGVDMMIVRELTGGIYFGEPRG 191
Query: 167 VVPG-----VVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLES 221
+ V S ++ +RIA+ AFE A R K+ +V KAN++ A L+ +
Sbjct: 192 ITINENGEEVGVSTEIYAAHEIDRIARVAFETAR-KRRGKLCSVDKANVLD-ASILWRKR 249
Query: 222 CREVAKKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXX- 280
+A +YP ++ + + VDN MQL+ P+QFD +VT N++G+++
Sbjct: 250 VTALASEYPDVELSHMYVDNAAMQLIRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLP 309
Query: 281 XXXXXXAEHAVFE--QGASAGNVGSDKILEEKIANPVALLLSSAMMLRH-LQFPAFADRL 337
+ +FE G++ G DK ANP+A +LS+AM+L++ L A R+
Sbjct: 310 SASLGESGPGLFEPIHGSAPDIAGQDK------ANPLATILSAAMLLKYGLGEEKAAKRI 363
Query: 338 ETAVEGVILEGKYRTKDL 355
E AV + +G +RT D+
Sbjct: 364 EDAVVDALNKG-FRTGDI 380
>AT1G31180.1 | Symbols: ATIMD3, IMD3, IPMDH1 | isopropylmalate
dehydrogenase 3 | chr1:11142843-11144617 REVERSE
LENGTH=404
Length = 404
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 168/378 (44%), Gaps = 56/378 (14%)
Query: 19 PGFGSTVPASQRWVTYMHRPGDGSP----RAVTLIPGDGIGPLVTGAVEQVMEA------ 68
PG S++ + Y R SP +TL+PGDGIGP V + V++
Sbjct: 15 PGRYSSLTDHKFRAPYRIRCAAASPVKKRYNITLLPGDGIGPEVISVAKNVLQKAGFLQG 74
Query: 69 -----MHAPVYFEKFDVHGTMKAVPAEVLDSIRKNKVCLKGGLVTPMGGGVSSLN----- 118
P D+ G +P E + +++ L G + GG N
Sbjct: 75 LEFDFQEMPFGGAALDLVGV--PLPEETSTAAKQSDAILLGAI----GGYKWDKNEKHLR 128
Query: 119 -----VQLRKELDLYASLVNCFNLPGLPTRH-------DNVDIVVIRENTEGEYSGLEHE 166
+ +R++L+++A+L LP L VD++++RE T G Y G
Sbjct: 129 PEMGLLNIRRDLNVFANLRPATVLPQLVDASTLKKEVAQGVDMMIVRELTGGIYFGEPRG 188
Query: 167 VVPG-----VVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLES 221
+ V + ++ +RIA+ AFE A R K+ +V KAN++ A L+ +
Sbjct: 189 ITINENGEEVGFNTEIYAAHEIDRIARVAFETAR-KRRGKLCSVDKANVLD-ASILWRKR 246
Query: 222 CREVAKKYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXX- 280
+A +YP ++ + + VDN MQLV P+QFD +VT N++G+++
Sbjct: 247 VTALASEYPDVELSHMYVDNAAMQLVRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLP 306
Query: 281 XXXXXXAEHAVFE--QGASAGNVGSDKILEEKIANPVALLLSSAMMLRH-LQFPAFADRL 337
+ +FE G++ G DK ANP+A +LS+AM+L++ L A +
Sbjct: 307 SASLGESGPGLFEPIHGSAPDIAGQDK------ANPLATILSAAMLLKYGLGEEKAAKMI 360
Query: 338 ETAVEGVILEGKYRTKDL 355
E AV + +G +RT D+
Sbjct: 361 EDAVVDALNKG-FRTGDI 377
>AT5G14200.2 | Symbols: | isopropylmalate dehydrogenase 1 |
chr5:4576220-4577615 FORWARD LENGTH=300
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 45/271 (16%)
Query: 19 PGFGSTVPASQRWVTYMHRPGDGSP----RAVTLIPGDGIGPLVTGAVEQVMEAMHA--- 71
PG S++ Q Y R SP + L+PGDGIGP V + V++ +
Sbjct: 18 PGKYSSLTDHQFRAPYRIRCAAASPGKKRYNIALLPGDGIGPEVISVAKNVLQKAGSLEG 77
Query: 72 --------PVYFEKFDVHGTMKAVPAEVLDSIRKNKVCLKGGLVTPMGGGVSSLNVQ--- 120
PV D+ G +P E + + + L G + GG N +
Sbjct: 78 LEFDFKEMPVGGAALDLVGV--PLPEETFTAAKLSDAILLGAI----GGYKWDKNEKHLR 131
Query: 121 -------LRKELDLYASLVNCFNLPGLPTRH-------DNVDIVVIRENTEGEYSGLEHE 166
LR++L ++A+L LP L + VD++++RE T G Y G
Sbjct: 132 PEMALFYLRRDLKVFANLRPATVLPQLVDASTLKKEVAEGVDMMIVRELTGGIYFGEPRG 191
Query: 167 VVPG-----VVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLES 221
+ V S ++ +RIA+ AFE A R K+ +V KAN++ A L+ +
Sbjct: 192 ITINENGEEVGVSTEIYAAHEIDRIARVAFETAR-KRRGKLCSVDKANVLD-ASILWRKR 249
Query: 222 CREVAKKYPGIKYNEIIVDNCCMQLVSKPEQ 252
+A +YP ++ + + VDN MQL+ P+Q
Sbjct: 250 VTALASEYPDVELSHMYVDNAAMQLIRDPKQ 280